-- dump date 20140619_042245 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001705702.1 189016632 6325344 1..1440 1 NC_010399.1 repA 1440 6325344 CMS_pCS0001 Clavibacter michiganensis subsp. sepedonicus repA YP_001705702.1 1 D 31964 CDS YP_001705703.1 189016633 6325363 1969..2712 1 NC_010399.1 hypothetical protein 2712 6325363 CMS_pCS0002 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705703.1 1969 D 31964 CDS YP_001705704.1 189016634 6325382 3190..3399 1 NC_010399.1 hypothetical protein 3399 6325382 CMS_pCS0003 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705704.1 3190 D 31964 CDS YP_001705705.1 189016635 6325374 3396..3785 1 NC_010399.1 hypothetical protein 3785 6325374 CMS_pCS0004 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705705.1 3396 D 31964 CDS YP_001705706.1 189016636 6325375 4004..4678 1 NC_010399.1 putative plasmid partitioning protein 4678 parA 6325375 parA Clavibacter michiganensis subsp. sepedonicus putative plasmid partitioning protein YP_001705706.1 4004 D 31964 CDS YP_001705707.1 189016637 6325385 4678..4941 1 NC_010399.1 hypothetical protein 4941 6325385 CMS_pCS0006 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705707.1 4678 D 31964 CDS YP_001705708.1 189016638 6325365 5009..7198 1 NC_010399.1 hypothetical protein 7198 6325365 CMS_pCS0007 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705708.1 5009 D 31964 CDS YP_001705709.1 189016639 6325359 complement(7208..7510) 1 NC_010399.1 hypothetical protein 7510 6325359 CMS_pCS0008 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705709.1 7208 R 31964 CDS YP_001705710.1 189016640 6325390 7755..9002 1 NC_010399.1 hypothetical protein 9002 6325390 CMS_pCS0009 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705710.1 7755 D 31964 CDS YP_001705711.1 189016641 6325335 9050..9436 1 NC_010399.1 hypothetical protein 9436 6325335 CMS_pCS0010 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705711.1 9050 D 31964 CDS YP_001705712.1 189016642 6325342 9445..10161 1 NC_010399.1 hypothetical protein 10161 6325342 CMS_pCS0011 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705712.1 9445 D 31964 CDS YP_001705713.1 189016643 6325361 10161..11546 1 NC_010399.1 putative integral membrane protein 11546 6325361 CMS_pCS0012 Clavibacter michiganensis subsp. sepedonicus putative integral membrane protein YP_001705713.1 10161 D 31964 CDS YP_001705714.1 189016644 6325383 11543..13225 1 NC_010399.1 hypothetical protein 13225 6325383 CMS_pCS0013 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705714.1 11543 D 31964 CDS YP_001705715.1 189016645 6325349 13222..14793 1 NC_010399.1 putative ATP/GTP-binding protein 14793 6325349 CMS_pCS0014 Clavibacter michiganensis subsp. sepedonicus putative ATP/GTP-binding protein YP_001705715.1 13222 D 31964 CDS YP_001705716.1 189016646 6325387 14808..15911 1 NC_010399.1 putative lipoprotein 15911 6325387 CMS_pCS0015 Clavibacter michiganensis subsp. sepedonicus putative lipoprotein YP_001705716.1 14808 D 31964 CDS YP_001705717.1 189016647 6325376 15908..16363 1 NC_010399.1 putative lipoprotein 16363 6325376 CMS_pCS0016 Clavibacter michiganensis subsp. sepedonicus putative lipoprotein YP_001705717.1 15908 D 31964 CDS YP_001705718.1 189016648 6325358 16357..16881 1 NC_010399.1 hypothetical protein 16881 6325358 CMS_pCS0017 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705718.1 16357 D 31964 CDS YP_001705719.1 189016649 6325394 16878..17651 1 NC_010399.1 hypothetical protein 17651 6325394 CMS_pCS0018 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705719.1 16878 D 31964 CDS YP_001705720.1 189016650 6325389 17673..18236 1 NC_010399.1 hypothetical protein 18236 6325389 CMS_pCS0019 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705720.1 17673 D 31964 CDS YP_001705721.1 189016651 6325352 complement(18247..19209) 1 NC_010399.1 putative integrase 19209 6325352 CMS_pCS0020 Clavibacter michiganensis subsp. sepedonicus putative integrase YP_001705721.1 18247 R 31964 CDS YP_001705722.1 189016652 6325393 19523..20227 1 NC_010399.1 hypothetical protein 20227 6325393 CMS_pCS0021 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705722.1 19523 D 31964 CDS YP_001705723.1 189016653 6325331 complement(20278..21147) 1 NC_010399.1 pat1 protein 21147 pat1 6325331 pat1 Clavibacter michiganensis subsp. sepedonicus pat1 protein YP_001705723.1 20278 R 31964 CDS YP_001705724.1 189016654 6325346 complement(21172..21558) 1 NC_010399.1 hypothetical protein 21558 6325346 CMS_pCS0023 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705724.1 21172 R 31964 CDS YP_001705725.1 189016655 6325368 21680..21826 1 NC_010399.1 hypothetical protein 21826 6325368 CMS_pCS0024 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705725.1 21680 D 31964 CDS YP_001705726.1 189016656 6325356 complement(21811..22260) 1 NC_010399.1 hypothetical protein 22260 6325356 CMS_pCS0025 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705726.1 21811 R 31964 CDS YP_001705727.1 189016657 6325388 22881..23843 1 NC_010399.1 putative transposase 23843 6325388 CMS_pCS0027 Clavibacter michiganensis subsp. sepedonicus putative transposase YP_001705727.1 22881 D 31964 CDS YP_001705728.1 189016658 6325348 24153..24380 1 NC_010399.1 hypothetical protein 24380 6325348 CMS_pCS0028 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705728.1 24153 D 31964 CDS YP_001705729.1 189016659 6325381 complement(24626..25210) 1 NC_010399.1 hypothetical protein 25210 6325381 CMS_pCS0029 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705729.1 24626 R 31964 CDS YP_001705730.1 189016660 6325384 25372..25560 1 NC_010399.1 hypothetical protein 25560 6325384 CMS_pCS0030 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705730.1 25372 D 31964 CDS YP_001705731.1 189016661 6325329 25585..25686 1 NC_010399.1 hypothetical protein 25686 6325329 CMS_pCS0031 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705731.1 25585 D 31964 CDS YP_001705732.1 189016662 6325377 complement(25973..26446) 1 NC_010399.1 hypothetical protein 26446 6325377 CMS_pCS0032 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705732.1 25973 R 31964 CDS YP_001705733.1 189016663 6325355 complement(26424..26897) 1 NC_010399.1 hypothetical protein 26897 6325355 CMS_pCS0033 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705733.1 26424 R 31964 CDS YP_001705734.1 189016664 6325360 27050..27406 1 NC_010399.1 hypothetical protein 27406 6325360 CMS_pCS0034 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705734.1 27050 D 31964 CDS YP_001705735.1 189016665 6325354 complement(27403..27663) 1 NC_010399.1 hypothetical protein 27663 6325354 CMS_pCS0035 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705735.1 27403 R 31964 CDS YP_001705736.1 189016666 6325373 complement(27895..28905) 1 NC_010399.1 hypothetical protein 28905 6325373 CMS_pCS0036 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705736.1 27895 R 31964 CDS YP_001705737.1 189016667 6325347 29632..30261 1 NC_010399.1 pat1 protein 30261 pat1 6325347 pat1 Clavibacter michiganensis subsp. sepedonicus pat1 protein YP_001705737.1 29632 D 31964 CDS YP_001705738.1 189016668 6325378 30304..30429 1 NC_010399.1 hypothetical protein 30429 6325378 CMS_pCS0038 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705738.1 30304 D 31964 CDS YP_001705739.1 189016669 6325334 complement(30721..31047) 1 NC_010399.1 hypothetical protein 31047 6325334 CMS_pCS0039 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705739.1 30721 R 31964 CDS YP_001705740.1 189016670 6325338 complement(31049..31438) 1 NC_010399.1 hypothetical protein 31438 6325338 CMS_pCS0040 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705740.1 31049 R 31964 CDS YP_001705741.1 189016671 6325333 31531..31785 1 NC_010399.1 hypothetical protein 31785 6325333 CMS_pCS0041 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705741.1 31531 D 31964 CDS YP_001705742.1 189016672 6325340 31813..32307 1 NC_010399.1 hypothetical protein 32307 6325340 CMS_pCS0042 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705742.1 31813 D 31964 CDS YP_001705743.1 189016673 6325386 32357..32800 1 NC_010399.1 hypothetical protein 32800 6325386 CMS_pCS0043 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705743.1 32357 D 31964 CDS YP_001705744.1 189016674 6325391 32899..33282 1 NC_010399.1 putative DNA-binding protein 33282 6325391 CMS_pCS0044 Clavibacter michiganensis subsp. sepedonicus putative DNA-binding protein YP_001705744.1 32899 D 31964 CDS YP_001705745.1 189016675 6325395 33290..33736 1 NC_010399.1 hypothetical protein 33736 6325395 CMS_pCS0045 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705745.1 33290 D 31964 CDS YP_001705746.1 189016676 6325392 33858..34067 1 NC_010399.1 hypothetical protein 34067 6325392 CMS_pCS0046 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705746.1 33858 D 31964 CDS YP_001705747.1 189016677 6325362 34093..34674 1 NC_010399.1 cell filamentation protein 34674 fic 6325362 fic Clavibacter michiganensis subsp. sepedonicus cell filamentation protein YP_001705747.1 34093 D 31964 CDS YP_001705748.1 189016678 6325366 34653..34934 1 NC_010399.1 hypothetical protein 34934 6325366 CMS_pCS0048 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705748.1 34653 D 31964 CDS YP_001705749.1 189016679 6325343 35629..37194 1 NC_010399.1 chromosome partitioning protein 37194 parB 6325343 parB Clavibacter michiganensis subsp. sepedonicus chromosome partitioning protein YP_001705749.1 35629 D 31964 CDS YP_001705750.1 189016680 6325379 complement(37328..37516) 1 NC_010399.1 hypothetical protein 37516 6325379 CMS_pCS0051 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705750.1 37328 R 31964 CDS YP_001705751.1 189016681 6325364 complement(37513..37821) 1 NC_010399.1 hypothetical protein 37821 6325364 CMS_pCS0052 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705751.1 37513 R 31964 CDS YP_001705752.1 189016682 6325330 38232..39134 1 NC_010399.1 hypothetical protein 39134 6325330 CMS_pCS0053 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705752.1 38232 D 31964 CDS YP_001705753.1 189016683 6325337 39652..39771 1 NC_010399.1 hypothetical protein 39771 6325337 CMS_pCS0054 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705753.1 39652 D 31964 CDS YP_001705754.1 189016684 6325380 39795..40547 1 NC_010399.1 single-strand binding protein homolog ssb 40547 ssb 6325380 ssb Clavibacter michiganensis subsp. sepedonicus single-strand binding protein homolog ssb YP_001705754.1 39795 D 31964 CDS YP_001705755.1 189016685 6325332 40550..41071 1 NC_010399.1 hypothetical protein 41071 6325332 CMS_pCS0056 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705755.1 40550 D 31964 CDS YP_001705756.1 189016686 6325371 41068..41205 1 NC_010399.1 hypothetical protein 41205 6325371 CMS_pCS0057 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705756.1 41068 D 31964 CDS YP_001705757.1 189016687 6325345 41202..41969 1 NC_010399.1 putative secreted protein 41969 6325345 CMS_pCS0058 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001705757.1 41202 D 31964 CDS YP_001705758.1 189016688 6325372 42040..42501 1 NC_010399.1 hypothetical protein 42501 6325372 CMS_pCS0059 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705758.1 42040 D 31964 CDS YP_001705759.1 189016689 6325341 43339..45393 1 NC_010399.1 cellulase CelA 45393 6325341 CMS_pCS0061 Clavibacter michiganensis subsp. sepedonicus cellulase CelA YP_001705759.1 43339 D 31964 CDS YP_001705760.1 189016690 6325370 complement(45698..46615) 1 NC_010399.1 putative MerR-family transcriptional regulator 46615 6325370 CMS_pCS0062 Clavibacter michiganensis subsp. sepedonicus putative MerR-family transcriptional regulator YP_001705760.1 45698 R 31964 CDS YP_001705761.1 189016691 6325367 complement(47068..47634) 1 NC_010399.1 hypothetical protein 47634 6325367 CMS_pCS0063 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705761.1 47068 R 31964 CDS YP_001705762.1 189016692 6325339 complement(47631..48263) 1 NC_010399.1 DNA recombinase 48263 6325339 CMS_pCS0064 Clavibacter michiganensis subsp. sepedonicus DNA recombinase YP_001705762.1 47631 R 31964 CDS YP_001705763.1 189016693 6325336 complement(48455..48640) 1 NC_010399.1 hypothetical protein 48640 6325336 CMS_pCS0065 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705763.1 48455 R 31964 CDS YP_001705764.1 189016694 6325357 complement(49340..49612) 1 NC_010399.1 hypothetical protein 49612 6325357 CMS_pCS0066 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705764.1 49340 R 31964 CDS YP_001705765.1 189016695 6325369 49729..49974 1 NC_010399.1 hypothetical protein 49974 6325369 CMS_pCS0067 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001705765.1 49729 D 31964 CDS YP_001708795.1 170780463 6159115 1..1431 1 NC_010407.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1431 dnaA 6159115 dnaA Clavibacter michiganensis subsp. sepedonicus chromosomal replication initiation protein YP_001708795.1 1 D 31964 CDS YP_001708796.1 170780464 6158664 1939..3129 1 NC_010407.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3129 dnaN 6158664 dnaN Clavibacter michiganensis subsp. sepedonicus DNA polymerase III subunit beta YP_001708796.1 1939 D 31964 CDS YP_001708797.1 170780465 6158670 complement(3140..4102) 1 NC_010407.1 Nu; insertion element IS1121 transposase 4102 6158670 CMS_0003 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001708797.1 3140 R 31964 CDS YP_001708798.1 170780466 6156010 4224..5111 1 NC_010407.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 5111 6156010 CMS_0004 Clavibacter michiganensis subsp. sepedonicus 6-phosphogluconate dehydrogenase YP_001708798.1 4224 D 31964 CDS YP_001708799.1 170780467 6156011 5119..6345 1 NC_010407.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 6345 recF 6156011 recF Clavibacter michiganensis subsp. sepedonicus recombination protein F YP_001708799.1 5119 D 31964 CDS YP_001708800.1 170780468 6156012 6342..6854 1 NC_010407.1 hypothetical protein 6854 6156012 CMS_0006 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708800.1 6342 D 31964 CDS YP_001708801.1 170780469 6156013 7095..9089 1 NC_010407.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 9089 gyrB 6156013 gyrB Clavibacter michiganensis subsp. sepedonicus DNA gyrase subunit B YP_001708801.1 7095 D 31964 CDS YP_001708802.1 170780470 6156014 9172..11832 1 NC_010407.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 11832 6156014 CMS_0008 Clavibacter michiganensis subsp. sepedonicus DNA gyrase subunit A YP_001708802.1 9172 D 31964 CDS YP_001708803.1 170780471 6156015 11825..12232 1 NC_010407.1 hypothetical protein 12232 6156015 CMS_0009 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708803.1 11825 D 31964 CDS YP_001708804.1 170780472 6159026 complement(12684..13322) 1 NC_010407.1 hypothetical protein 13322 6159026 CMS_0010 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708804.1 12684 R 31964 CDS YP_001708805.1 170780473 6156017 13432..13971 1 NC_010407.1 peptidyl-prolyl cis-trans isomerase 13971 cypB 6156017 cypB Clavibacter michiganensis subsp. sepedonicus peptidyl-prolyl cis-trans isomerase YP_001708805.1 13432 D 31964 CDS YP_001708806.1 170780474 6158648 13971..14834 1 NC_010407.1 rhomboid family membrane protein 14834 yggP 6158648 yggP Clavibacter michiganensis subsp. sepedonicus rhomboid family membrane protein YP_001708806.1 13971 D 31964 CDS YP_001708807.1 170780475 6159105 complement(15229..15468) 1 NC_010407.1 hypothetical protein 15468 6159105 CMS_0013 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708807.1 15229 R 31964 CDS YP_001708808.1 170780476 6156018 15550..16374 1 NC_010407.1 sortase 16374 srtA 6156018 srtA Clavibacter michiganensis subsp. sepedonicus sortase YP_001708808.1 15550 D 31964 CDS YP_001708809.1 170780477 6158996 16377..16535 1 NC_010407.1 hypothetical protein 16535 6158996 CMS_0015 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708809.1 16377 D 31964 CDS YP_001708810.1 170780478 6156019 16532..17170 1 NC_010407.1 glutamine amidotransferase 17170 6156019 CMS_0016 Clavibacter michiganensis subsp. sepedonicus glutamine amidotransferase YP_001708810.1 16532 D 31964 CDS YP_001708811.1 170780479 6156020 complement(17264..19012) 1 NC_010407.1 serine/threonine protein kinase 19012 6156020 CMS_0017 Clavibacter michiganensis subsp. sepedonicus serine/threonine protein kinase YP_001708811.1 17264 R 31964 CDS YP_001708812.1 170780480 6156021 complement(19147..21045) 1 NC_010407.1 serine/threonine kinase 21045 pknA 6156021 pknA Clavibacter michiganensis subsp. sepedonicus serine/threonine kinase YP_001708812.1 19147 R 31964 CDS YP_001708813.1 170780481 6158870 complement(21042..22493) 1 NC_010407.1 penicillin-binding protein 22493 6158870 CMS_0019 Clavibacter michiganensis subsp. sepedonicus penicillin-binding protein YP_001708813.1 21042 R 31964 CDS YP_001708814.1 170780482 6156022 complement(22490..23815) 1 NC_010407.1 FtsW/RodA/SpoVE family cell cycle protein 23815 6156022 CMS_0020 Clavibacter michiganensis subsp. sepedonicus FtsW/RodA/SpoVE family cell cycle protein YP_001708814.1 22490 R 31964 CDS YP_001708815.1 170780483 6156023 complement(23880..25142) 1 NC_010407.1 protein phosphatase 25142 6156023 CMS_0021 Clavibacter michiganensis subsp. sepedonicus protein phosphatase YP_001708815.1 23880 R 31964 CDS YP_001708816.1 170780484 6156024 complement(25147..25728) 1 NC_010407.1 hypothetical protein 25728 6156024 CMS_0022 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708816.1 25147 R 31964 CDS YP_001708817.1 170780485 6156025 complement(25725..26456) 1 NC_010407.1 hypothetical protein 26456 6156025 CMS_0023 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708817.1 25725 R 31964 CDS YP_001708818.1 170780486 6156027 complement(29064..30026) 1 NC_010407.1 P; insertion element IS1121 transposase 30026 6156027 CMS_0025 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001708818.1 29064 R 31964 CDS YP_001708819.1 170780487 6156028 30197..30883 1 NC_010407.1 two-component system response regulator 30883 6156028 CMS_0026 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001708819.1 30197 D 31964 CDS YP_001708820.1 170780488 6156029 30897..32057 1 NC_010407.1 two-component system sensor kinase 32057 6156029 CMS_0027 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001708820.1 30897 D 31964 CDS YP_001708821.1 170780489 6156030 complement(32088..32669) 1 NC_010407.1 hypothetical protein 32669 6156030 CMS_0028 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708821.1 32088 R 31964 CDS YP_001708822.1 170780490 6156031 complement(32763..32885) 1 NC_010407.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 32885 rpmJ 6156031 rpmJ Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L36 YP_001708822.1 32763 R 31964 CDS YP_001708823.1 170780491 6156032 32960..34003 1 NC_010407.1 hypothetical protein 34003 6156032 CMS_0030 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708823.1 32960 D 31964 CDS YP_001708824.1 170780492 6156033 34092..35954 1 NC_010407.1 May have alternative downstream translational start site.; ATP-dependent DNA helicase RecQ 35954 recQ 6156033 recQ Clavibacter michiganensis subsp. sepedonicus ATP-dependent DNA helicase RecQ YP_001708824.1 34092 D 31964 CDS YP_001708825.1 170780493 6158925 complement(36065..37267) 1 NC_010407.1 PS00134 Serine proteases, trypsin family, histidine active site.; serine protease 37267 6158925 CMS_0032 Clavibacter michiganensis subsp. sepedonicus serine protease YP_001708825.1 36065 R 31964 CDS YP_001708826.1 170780494 6156034 37602..41009 1 NC_010407.1 Contains N- and C-terminal hydrophobic regions, 9x YD repeat and sortase recognition site.; hypothetical protein 41009 6156034 CMS_0033 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708826.1 37602 D 31964 CDS YP_001708827.1 170780495 6156035 41006..41209 1 NC_010407.1 hypothetical protein 41209 6156035 CMS_0034 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708827.1 41006 D 31964 CDS YP_001708828.1 170780496 6156036 complement(41571..41702) 1 NC_010407.1 hypothetical protein 41702 6156036 CMS_0035 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708828.1 41571 R 31964 CDS YP_001708829.1 170780497 6156037 42106..42321 1 NC_010407.1 hypothetical protein 42321 6156037 CMS_0036 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708829.1 42106 D 31964 CDS YP_001708830.1 170780498 6156039 complement(42745..43707) 1 NC_010407.1 N/R/C?; insertion element IS1121 transposase 43707 6156039 CMS_0038 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001708830.1 42745 R 31964 CDS YP_001708831.1 170780499 6156040 complement(43805..44287) 1 NC_010407.1 mechanosensitive channel 44287 mscL 6156040 mscL Clavibacter michiganensis subsp. sepedonicus mechanosensitive channel YP_001708831.1 43805 R 31964 CDS YP_001708832.1 170780500 6158824 complement(44284..44643) 1 NC_010407.1 integral mebrane protein 44643 6158824 CMS_0040 Clavibacter michiganensis subsp. sepedonicus integral mebrane protein YP_001708832.1 44284 R 31964 CDS YP_001708833.1 170780501 6156041 complement(44742..45317) 1 NC_010407.1 5-formyltetrahydrofolate cyclo-ligase-related protein 45317 6156041 CMS_0041 Clavibacter michiganensis subsp. sepedonicus 5-formyltetrahydrofolate cyclo-ligase-related protein YP_001708833.1 44742 R 31964 CDS YP_001708834.1 170780502 6156042 45358..46254 1 NC_010407.1 UTP-glucose-1-phosphate uridylyltransferase 46254 galU 6156042 galU Clavibacter michiganensis subsp. sepedonicus UTP-glucose-1-phosphate uridylyltransferase YP_001708834.1 45358 D 31964 CDS YP_001708835.1 170780503 6158707 46312..46980 1 NC_010407.1 GCN5-related N-acetyltransferase 46980 6158707 CMS_0043 Clavibacter michiganensis subsp. sepedonicus GCN5-related N-acetyltransferase YP_001708835.1 46312 D 31964 CDS YP_001708836.1 170780504 6156043 47079..48047 1 NC_010407.1 hypothetical protein 48047 6156043 CMS_0044 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708836.1 47079 D 31964 CDS YP_001708837.1 170780505 6158631 50014..51633 1 NC_010407.1 hypothetical protein 51633 6158631 CMS_0047 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708837.1 50014 D 31964 CDS YP_001708838.1 170780506 6156045 51727..52038 1 NC_010407.1 transmembrane protein 52038 6156045 CMS_0048 Clavibacter michiganensis subsp. sepedonicus transmembrane protein YP_001708838.1 51727 D 31964 CDS YP_001708839.1 170780507 6156046 complement(52058..52495) 1 NC_010407.1 hypothetical protein 52495 6156046 CMS_0049 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708839.1 52058 R 31964 CDS YP_001708840.1 170780508 6156047 52615..53616 1 NC_010407.1 LacI family transcriptional regulator 53616 6156047 CMS_0050 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001708840.1 52615 D 31964 CDS YP_001708841.1 170780509 6156048 53732..55081 1 NC_010407.1 PS00017 ATP/GTP-binding site motif A (P-loop); extracellular solute-binding protein 55081 6156048 CMS_0051 Clavibacter michiganensis subsp. sepedonicus extracellular solute-binding protein YP_001708841.1 53732 D 31964 CDS YP_001708842.1 170780510 6156049 55177..56121 1 NC_010407.1 binding-protein-dependent transport protein 56121 6156049 CMS_0052 Clavibacter michiganensis subsp. sepedonicus binding-protein-dependent transport protein YP_001708842.1 55177 D 31964 CDS YP_001708843.1 170780511 6156050 56118..57038 1 NC_010407.1 binding-protein-dependent transport protein 57038 6156050 CMS_0053 Clavibacter michiganensis subsp. sepedonicus binding-protein-dependent transport protein YP_001708843.1 56118 D 31964 CDS YP_001708844.1 170780512 6156051 57121..58659 1 NC_010407.1 alpha-N-arabinofuranosidase (arabinosidase); alpha-L-arabinofuranosidase 58659 abfA 6156051 abfA Clavibacter michiganensis subsp. sepedonicus alpha-L-arabinofuranosidase YP_001708844.1 57121 D 31964 CDS YP_001708845.1 170780513 6158584 58824..60116 1 NC_010407.1 Nu/R; insertion element ISCmi3 transposase 60116 6158584 CMS_0055 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi3 transposase YP_001708845.1 58824 D 31964 CDS YP_001708846.1 170780514 6156052 60153..62114 1 NC_010407.1 helicase 62114 6156052 CMS_0056 Clavibacter michiganensis subsp. sepedonicus helicase YP_001708846.1 60153 D 31964 CDS YP_001708847.1 170780515 6156053 62529..64538 1 NC_010407.1 hypothetical protein 64538 6156053 CMS_0057 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708847.1 62529 D 31964 CDS YP_001708848.1 170780516 6156054 64811..66367 1 NC_010407.1 extracellular solute-binding protein 66367 6156054 CMS_0058 Clavibacter michiganensis subsp. sepedonicus extracellular solute-binding protein YP_001708848.1 64811 D 31964 CDS YP_001708849.1 170780517 6156055 66371..67333 1 NC_010407.1 oligopeptide transport integral membrane protein 67333 6156055 CMS_0059 Clavibacter michiganensis subsp. sepedonicus oligopeptide transport integral membrane protein YP_001708849.1 66371 D 31964 CDS YP_001708850.1 170780518 6156056 67330..68322 1 NC_010407.1 oligopeptide transport system integral membrane protein 68322 6156056 CMS_0060 Clavibacter michiganensis subsp. sepedonicus oligopeptide transport system integral membrane protein YP_001708850.1 67330 D 31964 CDS YP_001708851.1 170780519 6156057 68319..69185 1 NC_010407.1 ABC transporter ATP-binding subunit 69185 6156057 CMS_0061 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001708851.1 68319 D 31964 CDS YP_001708852.1 170780520 6156058 69182..70117 1 NC_010407.1 ABC transporter ATP-binding protein 70117 6156058 CMS_0062 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001708852.1 69182 D 31964 CDS YP_001708853.1 170780521 6156059 70114..71421 1 NC_010407.1 prolyl aminopeptidase 71421 pip 6156059 pip Clavibacter michiganensis subsp. sepedonicus prolyl aminopeptidase YP_001708853.1 70114 D 31964 CDS YP_001708854.1 170780522 6158868 71418..72878 1 NC_010407.1 Xaa-Pro aminopeptidase II 72878 6158868 CMS_0064 Clavibacter michiganensis subsp. sepedonicus Xaa-Pro aminopeptidase II YP_001708854.1 71418 D 31964 CDS YP_001708855.1 170780523 6156060 72898..74955 1 NC_010407.1 contains an N terminal GntR region and a C terminal FAD-dependent oxidoreductase; GntR family transcriptional regulator 74955 6156060 CMS_0065 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001708855.1 72898 D 31964 CDS YP_001708856.1 170780524 6156061 75098..76978 1 NC_010407.1 oxidase 76978 6156061 CMS_0066 Clavibacter michiganensis subsp. sepedonicus oxidase YP_001708856.1 75098 D 31964 CDS YP_001708857.1 170780525 6156062 76975..77892 1 NC_010407.1 dihydropicolinate synthase 77892 6156062 CMS_0067 Clavibacter michiganensis subsp. sepedonicus dihydropicolinate synthase YP_001708857.1 76975 D 31964 CDS YP_001708858.1 170780526 6156063 77900..78901 1 NC_010407.1 proline racemase 78901 6156063 CMS_0068 Clavibacter michiganensis subsp. sepedonicus proline racemase YP_001708858.1 77900 D 31964 CDS YP_001708859.1 170780527 6156064 78928..80439 1 NC_010407.1 aldehyde dehydrogenase 80439 6156064 CMS_0069 Clavibacter michiganensis subsp. sepedonicus aldehyde dehydrogenase YP_001708859.1 78928 D 31964 CDS YP_001708860.1 170780528 6156065 80666..82897 1 NC_010407.1 acyl CoA oxidase 82897 6156065 CMS_0070 Clavibacter michiganensis subsp. sepedonicus acyl CoA oxidase YP_001708860.1 80666 D 31964 CDS YP_001708861.1 170780529 6156066 complement(82980..83849) 1 NC_010407.1 peptidase 83849 6156066 CMS_0071 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001708861.1 82980 R 31964 CDS YP_001708862.1 170780530 6156067 complement(84014..84544) 1 NC_010407.1 hypothetical protein 84544 6156067 CMS_0072 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708862.1 84014 R 31964 CDS YP_001708863.1 170780531 6156068 complement(84650..84997) 1 NC_010407.1 PemK-like protein 84997 6156068 CMS_0073 Clavibacter michiganensis subsp. sepedonicus PemK-like protein YP_001708863.1 84650 R 31964 CDS YP_001708864.1 170780532 6156069 complement(84991..85242) 1 NC_010407.1 DNA-binding protein 85242 6156069 CMS_0074 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001708864.1 84991 R 31964 CDS YP_001708865.1 170780533 6156070 complement(85313..86101) 1 NC_010407.1 hypothetical protein 86101 6156070 CMS_0075 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708865.1 85313 R 31964 CDS YP_001708866.1 170780534 6156071 86215..87189 1 NC_010407.1 proline iminopeptidase 87189 6156071 CMS_0076 Clavibacter michiganensis subsp. sepedonicus proline iminopeptidase YP_001708866.1 86215 D 31964 CDS YP_001708867.1 170780535 6156072 complement(87259..87756) 1 NC_010407.1 glycerol-3-phosphate cytidyltransferase 87756 gct 6156072 gct Clavibacter michiganensis subsp. sepedonicus glycerol-3-phosphate cytidyltransferase YP_001708867.1 87259 R 31964 CDS YP_001708868.1 170780536 6158712 88135..90780 1 NC_010407.1 sortase-sorted surface protein 90780 6158712 CMS_0078 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface protein YP_001708868.1 88135 D 31964 CDS YP_001708869.1 170780537 6156073 91133..93754 1 NC_010407.1 sortase-sorted surface protein 93754 6156073 CMS_0079 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface protein YP_001708869.1 91133 D 31964 CDS YP_001708870.1 170780538 6156074 94101..95654 1 NC_010407.1 glycosyl transferase 95654 6156074 CMS_0080 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001708870.1 94101 D 31964 CDS YP_001708871.1 170780539 6156075 95654..96898 1 NC_010407.1 glycosyl transferase 96898 6156075 CMS_0081 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001708871.1 95654 D 31964 CDS YP_001708872.1 170780540 6156076 96895..97707 1 NC_010407.1 glycosyl transferase 97707 6156076 CMS_0082 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001708872.1 96895 D 31964 CDS YP_001708873.1 170780541 6156077 97704..98945 1 NC_010407.1 glycosyl transferase 98945 6156077 CMS_0083 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001708873.1 97704 D 31964 CDS YP_001708874.1 170780542 6156079 104728..105690 1 NC_010407.1 N/R/C Appears to be associated with the deletion of the central portion of an EPS cluster and the insertion of a sugar hydrolase with the same Pfam match as Cmm tomatinase; insertion element IS1121 transposase 105690 6156079 CMS_0086 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001708874.1 104728 D 31964 CDS YP_001708875.1 170780543 6156080 complement(105701..107005) 1 NC_010407.1 sugar hydrolase 107005 6156080 CMS_0087 Clavibacter michiganensis subsp. sepedonicus sugar hydrolase YP_001708875.1 105701 R 31964 CDS YP_001708876.1 170780544 6156081 107245..108303 1 NC_010407.1 lipoprotein 108303 6156081 CMS_0088 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001708876.1 107245 D 31964 CDS YP_001708877.1 170780545 6156082 complement(108350..109159) 1 NC_010407.1 hypothetical protein 109159 6156082 CMS_0089 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708877.1 108350 R 31964 CDS YP_001708878.1 170780546 6156083 109249..109776 1 NC_010407.1 MarR family transcriptional regulator 109776 6156083 CMS_0090 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001708878.1 109249 D 31964 CDS YP_001708879.1 170780547 6156084 109773..110513 1 NC_010407.1 hypothetical protein 110513 6156084 CMS_0091 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708879.1 109773 D 31964 CDS YP_001708880.1 170780548 6156085 complement(110574..112409) 1 NC_010407.1 glycosyl hydrolase 112409 6156085 CMS_0092 Clavibacter michiganensis subsp. sepedonicus glycosyl hydrolase YP_001708880.1 110574 R 31964 CDS YP_001708881.1 170780549 6156086 112656..113189 1 NC_010407.1 hypothetical protein 113189 6156086 CMS_0093 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708881.1 112656 D 31964 CDS YP_001708882.1 170780550 6159039 114004..115314 1 NC_010407.1 peptidase 115314 6159039 CMS_0094 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001708882.1 114004 D 31964 CDS YP_001708883.1 170780551 6156088 115316..116722 1 NC_010407.1 peptidase 116722 6156088 CMS_0095 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001708883.1 115316 D 31964 CDS YP_001708884.1 170780552 6156089 complement(116846..117373) 1 NC_010407.1 inorganic pyrophosphatase 117373 6156089 CMS_0096 Clavibacter michiganensis subsp. sepedonicus inorganic pyrophosphatase YP_001708884.1 116846 R 31964 CDS YP_001708885.1 170780553 6156090 117428..118453 1 NC_010407.1 hypothetical protein 118453 6156090 CMS_0097 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708885.1 117428 D 31964 CDS YP_001708886.1 170780554 6156091 118455..119006 1 NC_010407.1 hypoxanthine phosphoribosyltransferase 119006 6156091 CMS_0098 Clavibacter michiganensis subsp. sepedonicus hypoxanthine phosphoribosyltransferase YP_001708886.1 118455 D 31964 CDS YP_001708887.1 170780555 6156092 119164..121164 1 NC_010407.1 cell division protein ftsH-like protein 121164 6156092 CMS_0099 Clavibacter michiganensis subsp. sepedonicus cell division protein ftsH-like protein YP_001708887.1 119164 D 31964 CDS YP_001708888.1 170780556 6156093 121170..121760 1 NC_010407.1 GTP cyclohydrolase I 121760 6156093 CMS_0100 Clavibacter michiganensis subsp. sepedonicus GTP cyclohydrolase I YP_001708888.1 121170 D 31964 CDS YP_001708889.1 170780557 6156094 121757..122632 1 NC_010407.1 dihydropteroate synthase 122632 6156094 CMS_0101 Clavibacter michiganensis subsp. sepedonicus dihydropteroate synthase YP_001708889.1 121757 D 31964 CDS YP_001708890.1 170780558 6156095 122637..123347 1 NC_010407.1 hypothetical protein 123347 6156095 CMS_0102 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708890.1 122637 D 31964 CDS YP_001708891.1 170780559 6156096 123341..124264 1 NC_010407.1 bifunctional folate synthesis protein 124264 6156096 CMS_0103 Clavibacter michiganensis subsp. sepedonicus bifunctional folate synthesis protein YP_001708891.1 123341 D 31964 CDS YP_001708892.1 170780560 6156097 124261..124743 1 NC_010407.1 hypothetical protein 124743 6156097 CMS_0104 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708892.1 124261 D 31964 CDS YP_001708893.1 170780561 6156098 124794..125282 1 NC_010407.1 hypothetical protein 125282 6156098 CMS_0105 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708893.1 124794 D 31964 CDS YP_001708894.1 170780562 6156099 125279..127144 1 NC_010407.1 hypothetical protein 127144 6156099 CMS_0106 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708894.1 125279 D 31964 CDS YP_001708895.1 170780563 6156100 127141..127902 1 NC_010407.1 hypothetical protein 127902 6156100 CMS_0107 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708895.1 127141 D 31964 CDS YP_001708896.1 170780564 6156101 127945..128823 1 NC_010407.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 128823 panC 6156101 panC Clavibacter michiganensis subsp. sepedonicus pantoate--beta-alanine ligase YP_001708896.1 127945 D 31964 CDS YP_001708897.1 170780565 6156102 128939..130480 1 NC_010407.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 130480 lysS 6156102 lysS Clavibacter michiganensis subsp. sepedonicus lysyl-tRNA synthetase YP_001708897.1 128939 D 31964 CDS YP_001708898.1 170780566 6156103 130493..130618 1 NC_010407.1 hypothetical protein 130618 6156103 CMS_0110 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708898.1 130493 D 31964 CDS YP_001708899.1 170780567 6156104 130640..130822 1 NC_010407.1 hypothetical protein 130822 6156104 CMS_0111 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708899.1 130640 D 31964 CDS YP_001708900.1 170780568 6156105 130984..133494 1 NC_010407.1 Clp family ATP-binding protease 133494 6156105 CMS_0112 Clavibacter michiganensis subsp. sepedonicus Clp family ATP-binding protease YP_001708900.1 130984 D 31964 CDS YP_001708901.1 170780569 6156106 133655..134542 1 NC_010407.1 UDP-glucose 4-epimerase 134542 galE 6156106 galE Clavibacter michiganensis subsp. sepedonicus UDP-glucose 4-epimerase YP_001708901.1 133655 D 31964 CDS YP_001708902.1 170780570 6158706 134539..135516 1 NC_010407.1 aldo/keto reductase 135516 6158706 CMS_0114 Clavibacter michiganensis subsp. sepedonicus aldo/keto reductase YP_001708902.1 134539 D 31964 CDS YP_001708903.1 170780571 6156107 135788..136333 1 NC_010407.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 136333 rplJ 6156107 rplJ Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L10 YP_001708903.1 135788 D 31964 CDS YP_001708904.1 170780572 6156108 136408..136791 1 NC_010407.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 136791 rplL 6156108 rplL Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L7/L12 YP_001708904.1 136408 D 31964 CDS YP_001708905.1 170780573 6156109 complement(136870..138492) 1 NC_010407.1 LuxR family transcriptional regulator 138492 6156109 CMS_0117 Clavibacter michiganensis subsp. sepedonicus LuxR family transcriptional regulator YP_001708905.1 136870 R 31964 CDS YP_001708906.1 170780574 6156110 138650..139099 1 NC_010407.1 MarR family transcriptional regulator 139099 6156110 CMS_0118 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001708906.1 138650 D 31964 CDS YP_001708907.1 170780575 6156111 139192..140424 1 NC_010407.1 major facilitator superfamily transporter protein 140424 6156111 CMS_0119 Clavibacter michiganensis subsp. sepedonicus major facilitator superfamily transporter protein YP_001708907.1 139192 D 31964 CDS YP_001708908.1 170780576 6156112 complement(140479..141513) 1 NC_010407.1 LacI family transcriptional regulator 141513 6156112 CMS_0120 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001708908.1 140479 R 31964 CDS YP_001708909.1 170780577 6156113 141812..143176 1 NC_010407.1 extracellular solute-binding transport protein 143176 6156113 CMS_0121 Clavibacter michiganensis subsp. sepedonicus extracellular solute-binding transport protein YP_001708909.1 141812 D 31964 CDS YP_001708910.1 170780578 6156114 143312..144283 1 NC_010407.1 transport protein 144283 6156114 CMS_0122 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001708910.1 143312 D 31964 CDS YP_001708911.1 170780579 6156115 144280..145269 1 NC_010407.1 transport protein 145269 6156115 CMS_0123 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001708911.1 144280 D 31964 CDS YP_001708912.1 170780580 6156116 145552..147246 1 NC_010407.1 integral membrane, nucleotide-binding ABC transporter subunit 147246 6156116 CMS_0124 Clavibacter michiganensis subsp. sepedonicus integral membrane, nucleotide-binding ABC transporter subunit YP_001708912.1 145552 D 31964 CDS YP_001708913.1 170780581 6156117 complement(147342..148109) 1 NC_010407.1 Appears to have an N-terminal extension relative to homologues.; hypothetical protein 148109 6156117 CMS_0125 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708913.1 147342 R 31964 CDS YP_001708914.1 170780582 6156118 complement(148112..148801) 1 NC_010407.1 hypothetical protein 148801 6156118 CMS_0126 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708914.1 148112 R 31964 CDS YP_001708915.1 170780583 6156119 148972..150336 1 NC_010407.1 cystathionine beta-synthase 150336 6156119 CMS_0127 Clavibacter michiganensis subsp. sepedonicus cystathionine beta-synthase YP_001708915.1 148972 D 31964 CDS YP_001708916.1 170780584 6156120 150386..151558 1 NC_010407.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 151558 6156120 CMS_0128 Clavibacter michiganensis subsp. sepedonicus cystathionine gamma-synthase YP_001708916.1 150386 D 31964 CDS YP_001708917.1 170780585 6156121 complement(151599..152354) 1 NC_010407.1 ribonuclease H 152354 rnhA 6156121 rnhA Clavibacter michiganensis subsp. sepedonicus ribonuclease H YP_001708917.1 151599 R 31964 CDS YP_001708918.1 170780586 6158940 152529..153551 1 NC_010407.1 LacI family transcriptional regulator 153551 6158940 CMS_0130 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001708918.1 152529 D 31964 CDS YP_001708919.1 170780587 6156122 153739..155427 1 NC_010407.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 155427 araB 6156122 araB Clavibacter michiganensis subsp. sepedonicus ribulokinase YP_001708919.1 153739 D 31964 CDS YP_001708920.1 170780588 6158600 155424..156134 1 NC_010407.1 catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate; L-ribulose-5-phosphate 4-epimerase 156134 6158600 CMS_0132 Clavibacter michiganensis subsp. sepedonicus L-ribulose-5-phosphate 4-epimerase YP_001708920.1 155424 D 31964 CDS YP_001708921.1 170780589 6156123 156131..157648 1 NC_010407.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 157648 araA 6156123 araA Clavibacter michiganensis subsp. sepedonicus L-arabinose isomerase YP_001708921.1 156131 D 31964 CDS YP_001708922.1 170780590 6158599 157723..158841 1 NC_010407.1 extracellular sugar-binding protein 158841 6158599 CMS_0134 Clavibacter michiganensis subsp. sepedonicus extracellular sugar-binding protein YP_001708922.1 157723 D 31964 CDS YP_001708923.1 170780591 6156124 159021..160550 1 NC_010407.1 sugar-transport ATP binding protein 160550 6156124 CMS_0135 Clavibacter michiganensis subsp. sepedonicus sugar-transport ATP binding protein YP_001708923.1 159021 D 31964 CDS YP_001708924.1 170780592 6156125 160556..161743 1 NC_010407.1 sugar transport permease 161743 6156125 CMS_0136 Clavibacter michiganensis subsp. sepedonicus sugar transport permease YP_001708924.1 160556 D 31964 CDS YP_001708925.1 170780593 6156126 161880..162566 1 NC_010407.1 transport protein 162566 6156126 CMS_0137 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001708925.1 161880 D 31964 CDS YP_001708926.1 170780594 6156127 complement(162879..163166) 1 NC_010407.1 hypothetical protein 163166 6156127 CMS_0138 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708926.1 162879 R 31964 CDS YP_001708927.1 170780595 6156128 163552..164151 1 NC_010407.1 DNA-binding protein 164151 6156128 CMS_0139 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001708927.1 163552 D 31964 CDS YP_001708928.1 170780596 6156129 complement(164242..165204) 1 NC_010407.1 N/C; insertion element IS1121 transposase 165204 6156129 CMS_0140 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001708928.1 164242 R 31964 CDS YP_001708929.1 170780597 6156130 complement(165302..166495) 1 NC_010407.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 166495 xylA 6156130 xylA Clavibacter michiganensis subsp. sepedonicus xylose isomerase YP_001708929.1 165302 R 31964 CDS YP_001708930.1 170780598 6159102 166703..168208 1 NC_010407.1 beta-glucosidase 168208 6159102 CMS_0142 Clavibacter michiganensis subsp. sepedonicus beta-glucosidase YP_001708930.1 166703 D 31964 CDS YP_001708931.1 170780599 6156131 168205..168771 1 NC_010407.1 ribosomal-protein-alanine acetyltransferase 168771 6156131 CMS_0143 Clavibacter michiganensis subsp. sepedonicus ribosomal-protein-alanine acetyltransferase YP_001708931.1 168205 D 31964 CDS YP_001708932.1 170780600 6156132 complement(168819..169256) 1 NC_010407.1 MarR-family transcriptional regulator 169256 6156132 CMS_0144 Clavibacter michiganensis subsp. sepedonicus MarR-family transcriptional regulator YP_001708932.1 168819 R 31964 CDS YP_001708933.1 170780601 6156133 complement(169392..170348) 1 NC_010407.1 LysR family transcriptional regulator 170348 6156133 CMS_0145 Clavibacter michiganensis subsp. sepedonicus LysR family transcriptional regulator YP_001708933.1 169392 R 31964 CDS YP_001708934.1 170780602 6156134 170430..171521 1 NC_010407.1 hypothetical protein 171521 6156134 CMS_0146 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708934.1 170430 D 31964 CDS YP_001708935.1 170780603 6156135 171607..172920 1 NC_010407.1 membrane transport protein 172920 6156135 CMS_0147 Clavibacter michiganensis subsp. sepedonicus membrane transport protein YP_001708935.1 171607 D 31964 CDS YP_001708936.1 170780604 6156136 173030..174040 1 NC_010407.1 hypothetical protein 174040 6156136 CMS_0148 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708936.1 173030 D 31964 CDS YP_001708937.1 170780605 6156137 complement(174037..174942) 1 NC_010407.1 aminoglycoside phosphotransferase 174942 6156137 CMS_0149 Clavibacter michiganensis subsp. sepedonicus aminoglycoside phosphotransferase YP_001708937.1 174037 R 31964 CDS YP_001708938.1 170780606 6156138 complement(174939..175589) 1 NC_010407.1 hypothetical protein 175589 6156138 CMS_0150 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708938.1 174939 R 31964 CDS YP_001708939.1 170780607 6159062 complement(175923..178709) 1 NC_010407.1 LuxR family transcriptional regulator 178709 6159062 CMS_0151 Clavibacter michiganensis subsp. sepedonicus LuxR family transcriptional regulator YP_001708939.1 175923 R 31964 CDS YP_001708940.1 170780608 6156140 complement(179108..179770) 1 NC_010407.1 hypothetical protein 179770 6156140 CMS_0152 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708940.1 179108 R 31964 CDS YP_001708941.1 170780609 6156141 179995..182112 1 NC_010407.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 182112 6156141 CMS_0153 Clavibacter michiganensis subsp. sepedonicus phosphate acetyltransferase YP_001708941.1 179995 D 31964 CDS YP_001708942.1 170780610 6156142 182167..183357 1 NC_010407.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 183357 6156142 CMS_0154 Clavibacter michiganensis subsp. sepedonicus acetate kinase YP_001708942.1 182167 D 31964 CDS YP_001708943.1 170780611 6156143 183661..187968 1 NC_010407.1 sortase sorted surface protein 187968 6156143 CMS_0155 Clavibacter michiganensis subsp. sepedonicus sortase sorted surface protein YP_001708943.1 183661 D 31964 CDS YP_001708944.1 170780612 6156144 188188..189084 1 NC_010407.1 hypothetical protein 189084 6156144 CMS_0156 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708944.1 188188 D 31964 CDS YP_001708945.1 170780613 6156145 189081..190301 1 NC_010407.1 hypothetical protein 190301 6156145 CMS_0157 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708945.1 189081 D 31964 CDS YP_001708946.1 170780614 6156146 190326..192839 1 NC_010407.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 192839 6156146 CMS_0158 Clavibacter michiganensis subsp. sepedonicus DNA polymerase III subunits gamma and tau YP_001708946.1 190326 D 31964 CDS YP_001708947.1 170780615 6156147 192846..193445 1 NC_010407.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 193445 recR 6156147 recR Clavibacter michiganensis subsp. sepedonicus recombination protein RecR YP_001708947.1 192846 D 31964 CDS YP_001708948.1 170780616 6158926 193558..194823 1 NC_010407.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 194823 6158926 CMS_0160 Clavibacter michiganensis subsp. sepedonicus aspartate kinase YP_001708948.1 193558 D 31964 CDS YP_001708949.1 170780617 6156148 194885..195979 1 NC_010407.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 195979 6156148 CMS_0161 Clavibacter michiganensis subsp. sepedonicus aspartate-semialdehyde dehydrogenase YP_001708949.1 194885 D 31964 CDS YP_001708950.1 170780618 6156149 196067..197545 1 NC_010407.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 197545 6156149 CMS_0162 Clavibacter michiganensis subsp. sepedonicus malate:quinone oxidoreductase YP_001708950.1 196067 D 31964 CDS YP_001708951.1 170780619 6156151 198956..199585 1 NC_010407.1 two-component response regulator 199585 6156151 CMS_0165 Clavibacter michiganensis subsp. sepedonicus two-component response regulator YP_001708951.1 198956 D 31964 CDS YP_001708952.1 170780620 6156152 199586..200260 1 NC_010407.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 200260 6156152 CMS_0166 Clavibacter michiganensis subsp. sepedonicus thymidine kinase YP_001708952.1 199586 D 31964 CDS YP_001708953.1 170780621 6156153 200637..202031 1 NC_010407.1 Wzz-related membrane protein 202031 6156153 CMS_0167 Clavibacter michiganensis subsp. sepedonicus Wzz-related membrane protein YP_001708953.1 200637 D 31964 CDS YP_001708954.1 170780622 6156154 202394..203344 1 NC_010407.1 hypothetical protein 203344 6156154 CMS_0168 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708954.1 202394 D 31964 CDS YP_001708955.1 170780623 6156155 203341..205161 1 NC_010407.1 hypothetical protein 205161 6156155 CMS_0169 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708955.1 203341 D 31964 CDS YP_001708956.1 170780624 6156156 205178..205834 1 NC_010407.1 sortase sorted surface protein 205834 6156156 CMS_0170 Clavibacter michiganensis subsp. sepedonicus sortase sorted surface protein YP_001708956.1 205178 D 31964 CDS YP_001708957.1 170780625 6156157 206154..206696 1 NC_010407.1 sortase sorted surface protein 206696 6156157 CMS_0171 Clavibacter michiganensis subsp. sepedonicus sortase sorted surface protein YP_001708957.1 206154 D 31964 CDS YP_001708958.1 170780626 6156158 complement(206736..207212) 1 NC_010407.1 May confer antibiotic resistance; VanZ-like membrane protein 207212 6156158 CMS_0172 Clavibacter michiganensis subsp. sepedonicus VanZ-like membrane protein YP_001708958.1 206736 R 31964 CDS YP_001708959.1 170780627 6156159 207332..208363 1 NC_010407.1 monooxygenase 208363 6156159 CMS_0173 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001708959.1 207332 D 31964 CDS YP_001708960.1 170780628 6156160 208489..210690 1 NC_010407.1 penicillin-binding protein/transpeptidase 210690 6156160 CMS_0174 Clavibacter michiganensis subsp. sepedonicus penicillin-binding protein/transpeptidase YP_001708960.1 208489 D 31964 CDS YP_001708961.1 170780629 6156161 210845..212080 1 NC_010407.1 acyltransferase 212080 6156161 CMS_0175 Clavibacter michiganensis subsp. sepedonicus acyltransferase YP_001708961.1 210845 D 31964 CDS YP_001708962.1 170780630 6156162 212151..212576 1 NC_010407.1 hypothetical protein 212576 6156162 CMS_0176 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708962.1 212151 D 31964 CDS YP_001708963.1 170780631 6159058 complement(212822..213766) 1 NC_010407.1 phosphoesterase protein 213766 6159058 CMS_0177 Clavibacter michiganensis subsp. sepedonicus phosphoesterase protein YP_001708963.1 212822 R 31964 CDS YP_001708964.1 170780632 6156164 complement(213766..216306) 1 NC_010407.1 penicillin-binding protein/transpeptidase 216306 6156164 CMS_0178 Clavibacter michiganensis subsp. sepedonicus penicillin-binding protein/transpeptidase YP_001708964.1 213766 R 31964 CDS YP_001708965.1 170780633 6156165 216412..216594 1 NC_010407.1 hypothetical protein 216594 6156165 CMS_0179 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708965.1 216412 D 31964 CDS YP_001708966.1 170780634 6156166 216594..217058 1 NC_010407.1 hypothetical protein 217058 6156166 CMS_0180 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708966.1 216594 D 31964 CDS YP_001708967.1 170780635 6156167 complement(217143..219173) 1 NC_010407.1 acetyl-coenzyme A synthetase 219173 6156167 CMS_0181 Clavibacter michiganensis subsp. sepedonicus acetyl-coenzyme A synthetase YP_001708967.1 217143 R 31964 CDS YP_001708968.1 170780636 6156168 219514..220782 1 NC_010407.1 secretory protein 220782 6156168 CMS_0182 Clavibacter michiganensis subsp. sepedonicus secretory protein YP_001708968.1 219514 D 31964 CDS YP_001708969.1 170780637 6156169 220779..221780 1 NC_010407.1 hypothetical protein 221780 6156169 CMS_0183 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708969.1 220779 D 31964 CDS YP_001708970.1 170780638 6156170 221777..222343 1 NC_010407.1 hypothetical protein 222343 6156170 CMS_0184 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708970.1 221777 D 31964 CDS YP_001708971.1 170780639 6156171 222340..222741 1 NC_010407.1 hypothetical protein 222741 6156171 CMS_0185 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708971.1 222340 D 31964 CDS YP_001708972.1 170780640 6156172 222731..223087 1 NC_010407.1 hypothetical protein 223087 6156172 CMS_0186 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708972.1 222731 D 31964 CDS YP_001708973.1 170780641 6156173 223301..226339 1 NC_010407.1 DNA topoisomerase I 226339 6156173 CMS_0187 Clavibacter michiganensis subsp. sepedonicus DNA topoisomerase I YP_001708973.1 223301 D 31964 CDS YP_001708974.1 170780642 6156174 226336..226971 1 NC_010407.1 thymidylate kinase 226971 6156174 CMS_0188 Clavibacter michiganensis subsp. sepedonicus thymidylate kinase YP_001708974.1 226336 D 31964 CDS YP_001708975.1 170780643 6156175 226968..228227 1 NC_010407.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 228227 6156175 CMS_0189 Clavibacter michiganensis subsp. sepedonicus DNA polymerase III subunit delta' YP_001708975.1 226968 D 31964 CDS YP_001708976.1 170780644 6156176 228224..229801 1 NC_010407.1 proteinase 229801 6156176 CMS_0190 Clavibacter michiganensis subsp. sepedonicus proteinase YP_001708976.1 228224 D 31964 CDS YP_001708977.1 170780645 6159063 230275..231636 1 NC_010407.1 peptidase 231636 6159063 CMS_0191 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001708977.1 230275 D 31964 CDS YP_001708978.1 170780646 6156178 231701..232291 1 NC_010407.1 nicotinamidase/pyrazinamidase 232291 6156178 CMS_0192 Clavibacter michiganensis subsp. sepedonicus nicotinamidase/pyrazinamidase YP_001708978.1 231701 D 31964 CDS YP_001708979.1 170780647 6156179 232371..233846 1 NC_010407.1 succinate-semialdehyde dehydrogenase 233846 6156179 CMS_0193 Clavibacter michiganensis subsp. sepedonicus succinate-semialdehyde dehydrogenase YP_001708979.1 232371 D 31964 CDS YP_001708980.1 170780648 6156180 233846..234658 1 NC_010407.1 tRNA/rRNA methyltransferase 234658 6156180 CMS_0194 Clavibacter michiganensis subsp. sepedonicus tRNA/rRNA methyltransferase YP_001708980.1 233846 D 31964 CDS YP_001708981.1 170780649 6156181 234778..235146 1 NC_010407.1 hypothetical protein 235146 6156181 CMS_0195 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708981.1 234778 D 31964 CDS YP_001708982.1 170780650 6156182 complement(235163..237094) 1 NC_010407.1 ABC transporter 237094 6156182 CMS_0196 Clavibacter michiganensis subsp. sepedonicus ABC transporter YP_001708982.1 235163 R 31964 CDS YP_001708983.1 170780651 6156183 237329..238222 1 NC_010407.1 ABC transporter ATP-binding protein 238222 6156183 CMS_0197 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001708983.1 237329 D 31964 CDS YP_001708984.1 170780652 6156184 238219..239049 1 NC_010407.1 ABC transporter integral membrane subunit 239049 6156184 CMS_0198 Clavibacter michiganensis subsp. sepedonicus ABC transporter integral membrane subunit YP_001708984.1 238219 D 31964 CDS YP_001708985.1 170780653 6156185 239046..239894 1 NC_010407.1 ABC transporter integral membrane subunit 239894 6156185 CMS_0199 Clavibacter michiganensis subsp. sepedonicus ABC transporter integral membrane subunit YP_001708985.1 239046 D 31964 CDS YP_001708986.1 170780654 6156186 complement(239779..241200) 1 NC_010407.1 Overlap with downstream CDS possibly due to mutation leading to late stop.; MFS family transporter 241200 6156186 CMS_0200 Clavibacter michiganensis subsp. sepedonicus MFS family transporter YP_001708986.1 239779 R 31964 CDS YP_001708987.1 170780655 6156187 241359..242171 1 NC_010407.1 carbohydrate kinase 242171 6156187 CMS_0201 Clavibacter michiganensis subsp. sepedonicus carbohydrate kinase YP_001708987.1 241359 D 31964 CDS YP_001708988.1 170780656 6156188 242177..242737 1 NC_010407.1 Has hydrophobis regions but no predicted membrane spans.; hypothetical protein 242737 6156188 CMS_0202 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708988.1 242177 D 31964 CDS YP_001708989.1 170780657 6156189 complement(242709..243230) 1 NC_010407.1 DNA-binding membrane protein 243230 6156189 CMS_0203 Clavibacter michiganensis subsp. sepedonicus DNA-binding membrane protein YP_001708989.1 242709 R 31964 CDS YP_001708990.1 170780658 6156190 243373..243663 1 NC_010407.1 hypothetical protein 243663 6156190 CMS_0204 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708990.1 243373 D 31964 CDS YP_001708991.1 170780659 6156191 complement(243660..243869) 1 NC_010407.1 hypothetical protein 243869 6156191 CMS_0205 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708991.1 243660 R 31964 CDS YP_001708992.1 170780660 6156192 complement(243869..244423) 1 NC_010407.1 sulfur-binding protein 244423 6156192 CMS_0206 Clavibacter michiganensis subsp. sepedonicus sulfur-binding protein YP_001708992.1 243869 R 31964 CDS YP_001708993.1 170780661 6156193 244544..245233 1 NC_010407.1 hypothetical protein 245233 6156193 CMS_0207 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708993.1 244544 D 31964 CDS YP_001708994.1 170780662 6156194 complement(245300..246652) 1 NC_010407.1 transport protein 246652 6156194 CMS_0208 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001708994.1 245300 R 31964 CDS YP_001708995.1 170780663 6156195 complement(246817..248157) 1 NC_010407.1 transport protein 248157 6156195 CMS_0209 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001708995.1 246817 R 31964 CDS YP_001708996.1 170780664 6156196 248449..248745 1 NC_010407.1 hypothetical protein 248745 6156196 CMS_0210 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708996.1 248449 D 31964 CDS YP_001708997.1 170780665 6156197 complement(248756..249718) 1 NC_010407.1 N/R; insertion element IS1121 transposase 249718 6156197 CMS_0211 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001708997.1 248756 R 31964 CDS YP_001708998.1 170780666 6156198 complement(249846..250004) 1 NC_010407.1 hypothetical protein 250004 6156198 CMS_0212 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001708998.1 249846 R 31964 CDS YP_001708999.1 170780667 6156199 complement(250146..250670) 1 NC_010407.1 acetyltransferase 250670 6156199 CMS_0213 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001708999.1 250146 R 31964 CDS YP_001709000.1 170780668 6156200 complement(250679..251647) 1 NC_010407.1 reductase 251647 6156200 CMS_0214 Clavibacter michiganensis subsp. sepedonicus reductase YP_001709000.1 250679 R 31964 CDS YP_001709001.1 170780669 6156201 251685..252221 1 NC_010407.1 hypothetical protein 252221 6156201 CMS_0215 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709001.1 251685 D 31964 CDS YP_001709002.1 170780670 6156202 252209..252652 1 NC_010407.1 cytidine deaminase 252652 6156202 CMS_0216 Clavibacter michiganensis subsp. sepedonicus cytidine deaminase YP_001709002.1 252209 D 31964 CDS YP_001709003.1 170780671 6156203 complement(252848..253279) 1 NC_010407.1 hypothetical protein 253279 6156203 CMS_0217 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709003.1 252848 R 31964 CDS YP_001709004.1 170780672 6156204 complement(253622..254503) 1 NC_010407.1 hypothetical protein 254503 6156204 CMS_0218 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709004.1 253622 R 31964 CDS YP_001709005.1 170780673 6156205 complement(254527..255489) 1 NC_010407.1 Nu; insertion element IS1121 transposase 255489 6156205 CMS_0219 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709005.1 254527 R 31964 CDS YP_001709006.1 170780674 6156206 complement(255587..256060) 1 NC_010407.1 hypothetical protein 256060 6156206 CMS_0220 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709006.1 255587 R 31964 CDS YP_001709007.1 170780675 6156207 256080..257060 1 NC_010407.1 oxidoreductase 257060 6156207 CMS_0221 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709007.1 256080 D 31964 CDS YP_001709008.1 170780676 6156208 complement(257100..257672) 1 NC_010407.1 hypothetical protein 257672 6156208 CMS_0222 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709008.1 257100 R 31964 CDS YP_001709009.1 170780677 6156209 257781..259481 1 NC_010407.1 membrane-embedded two-component sensor kinase 259481 6156209 CMS_0223 Clavibacter michiganensis subsp. sepedonicus membrane-embedded two-component sensor kinase YP_001709009.1 257781 D 31964 CDS YP_001709010.1 170780678 6156210 259631..260398 1 NC_010407.1 two-component system phosphotransfer protein 260398 6156210 CMS_0224 Clavibacter michiganensis subsp. sepedonicus two-component system phosphotransfer protein YP_001709010.1 259631 D 31964 CDS YP_001709011.1 170780679 6156211 complement(260591..261394) 1 NC_010407.1 two component response regulator 261394 6156211 CMS_0225 Clavibacter michiganensis subsp. sepedonicus two component response regulator YP_001709011.1 260591 R 31964 CDS YP_001709012.1 170780680 6156212 complement(261591..261959) 1 NC_010407.1 hypothetical protein 261959 6156212 CMS_0226 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709012.1 261591 R 31964 CDS YP_001709013.1 170780681 6156213 complement(262217..263053) 1 NC_010407.1 exonuclease 263053 6156213 CMS_0227 Clavibacter michiganensis subsp. sepedonicus exonuclease YP_001709013.1 262217 R 31964 CDS YP_001709014.1 170780682 6156214 complement(263122..263520) 1 NC_010407.1 hypothetical protein 263520 6156214 CMS_0228 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709014.1 263122 R 31964 CDS YP_001709015.1 170780683 6156215 complement(263517..264158) 1 NC_010407.1 hypothetical protein 264158 6156215 CMS_0229 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709015.1 263517 R 31964 CDS YP_001709016.1 170780684 6156216 complement(264155..264709) 1 NC_010407.1 RNA polymerase sigma factor 264709 6156216 CMS_0230 Clavibacter michiganensis subsp. sepedonicus RNA polymerase sigma factor YP_001709016.1 264155 R 31964 CDS YP_001709017.1 170780685 6156217 264831..265295 1 NC_010407.1 hypothetical protein 265295 6156217 CMS_0231 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709017.1 264831 D 31964 CDS YP_001709018.1 170780686 6156218 265467..266342 1 NC_010407.1 dehydrogenase 266342 6156218 CMS_0232 Clavibacter michiganensis subsp. sepedonicus dehydrogenase YP_001709018.1 265467 D 31964 CDS YP_001709019.1 170780687 6156219 266409..266963 1 NC_010407.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; uridine 5'-monophosphate synthase; orotate phosphoribosyltransferase 266963 pyrE 6156219 pyrE Clavibacter michiganensis subsp. sepedonicus orotate phosphoribosyltransferase YP_001709019.1 266409 D 31964 CDS YP_001709020.1 170780688 6158910 266963..269104 1 NC_010407.1 large membrane associated protein 269104 6158910 CMS_0234 Clavibacter michiganensis subsp. sepedonicus large membrane associated protein YP_001709020.1 266963 D 31964 CDS YP_001709021.1 170780689 6156220 269229..270539 1 NC_010407.1 efflux protein 270539 6156220 CMS_0235 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001709021.1 269229 D 31964 CDS YP_001709022.1 170780690 6156221 270536..271753 1 NC_010407.1 efflux protein 271753 6156221 CMS_0236 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001709022.1 270536 D 31964 CDS YP_001709023.1 170780691 6156222 271826..272323 1 NC_010407.1 hypothetical protein 272323 6156222 CMS_0237 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709023.1 271826 D 31964 CDS YP_001709024.1 170780692 6156223 272381..273418 1 NC_010407.1 hypothetical protein 273418 6156223 CMS_0238 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709024.1 272381 D 31964 CDS YP_001709025.1 170780693 6156224 complement(273490..274287) 1 NC_010407.1 N-acetylglucosamine-6-phosphate deacetylase 274287 6156224 CMS_0239 Clavibacter michiganensis subsp. sepedonicus N-acetylglucosamine-6-phosphate deacetylase YP_001709025.1 273490 R 31964 CDS YP_001709026.1 170780694 6156225 274417..275322 1 NC_010407.1 phosphoesterase 275322 6156225 CMS_0240 Clavibacter michiganensis subsp. sepedonicus phosphoesterase YP_001709026.1 274417 D 31964 CDS YP_001709027.1 170780695 6156226 complement(275386..275556) 1 NC_010407.1 hypothetical protein 275556 6156226 CMS_0241 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709027.1 275386 R 31964 CDS YP_001709028.1 170780696 6156227 275741..276160 1 NC_010407.1 Contains possible coiled-coil region.; hypothetical protein 276160 6156227 CMS_0242 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709028.1 275741 D 31964 CDS YP_001709029.1 170780697 6156228 276249..278438 1 NC_010407.1 ATP-dependent DNA helicase 278438 6156228 CMS_0243 Clavibacter michiganensis subsp. sepedonicus ATP-dependent DNA helicase YP_001709029.1 276249 D 31964 CDS YP_001709030.1 170780698 6156229 complement(278454..279458) 1 NC_010407.1 DNA methylase 279458 6156229 CMS_0244 Clavibacter michiganensis subsp. sepedonicus DNA methylase YP_001709030.1 278454 R 31964 CDS YP_001709031.1 170780699 6156230 279634..280878 1 NC_010407.1 Includes proline-rich N-terminal region which may not be real; hypothetical protein 280878 6156230 CMS_0245 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709031.1 279634 D 31964 CDS YP_001709032.1 170780700 6156231 281031..281936 1 NC_010407.1 hypothetical protein 281936 6156231 CMS_0246 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709032.1 281031 D 31964 CDS YP_001709033.1 170780701 6156232 282015..283247 1 NC_010407.1 hydrolase 283247 6156232 CMS_0247 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709033.1 282015 D 31964 CDS YP_001709034.1 170780702 6156233 complement(283284..284378) 1 NC_010407.1 oxidoreductase 284378 6156233 CMS_0248 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709034.1 283284 R 31964 CDS YP_001709035.1 170780703 6156234 284562..286817 1 NC_010407.1 C-terminal region similar to sugar synthases eg. UniProt:SUSY_BETVU (EMBL:BVSSMRNA) Beta vulgaris (Sugar beet) Sucrose synthase; glycerol transferase 286817 6156234 CMS_0249 Clavibacter michiganensis subsp. sepedonicus glycerol transferase YP_001709035.1 284562 D 31964 CDS YP_001709036.1 170780704 6156235 286814..288139 1 NC_010407.1 glycosyl transferase 288139 6156235 CMS_0250 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709036.1 286814 D 31964 CDS YP_001709037.1 170780705 6156236 288281..288454 1 NC_010407.1 small membrane protein 288454 6156236 CMS_0251 Clavibacter michiganensis subsp. sepedonicus small membrane protein YP_001709037.1 288281 D 31964 CDS YP_001709038.1 170780706 6156237 288525..290225 1 NC_010407.1 hypothetical protein 290225 6156237 CMS_0252 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709038.1 288525 D 31964 CDS YP_001709039.1 170780707 6156238 290225..291160 1 NC_010407.1 hypothetical protein 291160 6156238 CMS_0253 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709039.1 290225 D 31964 CDS YP_001709040.1 170780708 6156239 291157..292002 1 NC_010407.1 hypothetical protein 292002 6156239 CMS_0254 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709040.1 291157 D 31964 CDS YP_001709041.1 170780709 6156241 292856..293359 1 NC_010407.1 acetyltransferase 293359 6156241 CMS_0256 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001709041.1 292856 D 31964 CDS YP_001709042.1 170780710 6156242 complement(293432..294187) 1 NC_010407.1 hypothetical protein 294187 6156242 CMS_0257 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709042.1 293432 R 31964 CDS YP_001709043.1 170780711 6156244 complement(297199..299115) 1 NC_010407.1 peptidase 299115 6156244 CMS_0261 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001709043.1 297199 R 31964 CDS YP_001709044.1 170780712 6156245 complement(299400..300089) 1 NC_010407.1 hypothetical protein 300089 6156245 CMS_0262 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709044.1 299400 R 31964 CDS YP_001709045.1 170780713 6156246 300329..301054 1 NC_010407.1 TetR family transcriptional regulator 301054 6156246 CMS_0263 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709045.1 300329 D 31964 CDS YP_001709046.1 170780714 6156247 complement(301122..303383) 1 NC_010407.1 phospholipase C 303383 6156247 CMS_0264 Clavibacter michiganensis subsp. sepedonicus phospholipase C YP_001709046.1 301122 R 31964 CDS YP_001709047.1 170780715 6156248 complement(303592..304149) 1 NC_010407.1 hypothetical protein 304149 6156248 CMS_0265 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709047.1 303592 R 31964 CDS YP_001709048.1 170780716 6156249 complement(304289..304969) 1 NC_010407.1 hypothetical protein 304969 6156249 CMS_0266 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709048.1 304289 R 31964 CDS YP_001709049.1 170780717 6156250 complement(305035..305997) 1 NC_010407.1 Nu/R; insertion element ISCmi2 transposase 305997 6156250 CMS_0267 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709049.1 305035 R 31964 CDS YP_001709050.1 170780718 6156251 complement(306138..306788) 1 NC_010407.1 hydrolase 306788 6156251 CMS_0268 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709050.1 306138 R 31964 CDS YP_001709051.1 170780719 6156252 307113..310601 1 NC_010407.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 310601 rpoB 6156252 rpoB Clavibacter michiganensis subsp. sepedonicus DNA-directed RNA polymerase subunit beta YP_001709051.1 307113 D 31964 CDS YP_001709052.1 170780720 6158961 310650..314549 1 NC_010407.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 314549 rpoC 6158961 rpoC Clavibacter michiganensis subsp. sepedonicus DNA-directed RNA polymerase subunit beta' YP_001709052.1 310650 D 31964 CDS YP_001709053.1 170780721 6158962 314619..315221 1 NC_010407.1 hypothetical protein 315221 6158962 CMS_0271 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709053.1 314619 D 31964 CDS YP_001709054.1 170780722 6156253 315292..316275 1 NC_010407.1 extracellular solute-binding transport protein 316275 6156253 CMS_0272 Clavibacter michiganensis subsp. sepedonicus extracellular solute-binding transport protein YP_001709054.1 315292 D 31964 CDS YP_001709055.1 170780723 6156254 316320..316985 1 NC_010407.1 transport protein 316985 6156254 CMS_0273 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709055.1 316320 D 31964 CDS YP_001709056.1 170780724 6156255 317116..317811 1 NC_010407.1 ABC transporter ATP-binding protein 317811 6156255 CMS_0274 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001709056.1 317116 D 31964 CDS YP_001709057.1 170780725 6156256 317885..318787 1 NC_010407.1 hypothetical protein 318787 6156256 CMS_0275 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709057.1 317885 D 31964 CDS YP_001709058.1 170780726 6156257 318831..319232 1 NC_010407.1 hypothetical protein 319232 6156257 CMS_0276 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709058.1 318831 D 31964 CDS YP_001709059.1 170780727 6156258 319497..319871 1 NC_010407.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 319871 rpsL 6156258 rpsL Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S12 YP_001709059.1 319497 D 31964 CDS YP_001709060.1 170780728 6156259 319871..320341 1 NC_010407.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 320341 6156259 CMS_0278 Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S7 YP_001709060.1 319871 D 31964 CDS YP_001709061.1 170780729 6156260 320389..322503 1 NC_010407.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 322503 6156260 CMS_0279 Clavibacter michiganensis subsp. sepedonicus elongation factor G YP_001709061.1 320389 D 31964 CDS YP_001709062.1 170780730 6156261 322618..323811 1 NC_010407.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 323811 6156261 CMS_0280 Clavibacter michiganensis subsp. sepedonicus elongation factor Tu YP_001709062.1 322618 D 31964 CDS YP_001709063.1 170780731 6156262 323961..324929 1 NC_010407.1 hypothetical protein 324929 6156262 CMS_0281 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709063.1 323961 D 31964 CDS YP_001709064.1 170780732 6156263 325369..325677 1 NC_010407.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 325677 rpsJ 6156263 rpsJ Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S10 YP_001709064.1 325369 D 31964 CDS YP_001709065.1 170780733 6156264 325686..326339 1 NC_010407.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 326339 rplC 6156264 rplC Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L3 YP_001709065.1 325686 D 31964 CDS YP_001709066.1 170780734 6156265 326342..326998 1 NC_010407.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 326998 rplD 6156265 rplD Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L4 YP_001709066.1 326342 D 31964 CDS YP_001709067.1 170780735 6156266 326995..327294 1 NC_010407.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 327294 rplW 6156266 rplW Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L23 YP_001709067.1 326995 D 31964 CDS YP_001709068.1 170780736 6158952 327317..328156 1 NC_010407.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 328156 rplB 6158952 rplB Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L2 YP_001709068.1 327317 D 31964 CDS YP_001709069.1 170780737 6156267 328169..328450 1 NC_010407.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 328450 rpsS 6156267 rpsS Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S19 YP_001709069.1 328169 D 31964 CDS YP_001709070.1 170780738 6156268 328476..328868 1 NC_010407.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 328868 rplV 6156268 rplV Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L22 YP_001709070.1 328476 D 31964 CDS YP_001709071.1 170780739 6156269 328868..329665 1 NC_010407.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 329665 rpsC 6156269 rpsC Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S3 YP_001709071.1 328868 D 31964 CDS YP_001709072.1 170780740 6156270 329668..330087 1 NC_010407.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 330087 rplP 6156270 rplP Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L16 YP_001709072.1 329668 D 31964 CDS YP_001709073.1 170780741 6156271 330087..330413 1 NC_010407.1 50S ribosomal protein L29 330413 rpmC 6156271 rpmC Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L29 YP_001709073.1 330087 D 31964 CDS YP_001709074.1 170780742 6158956 330410..330712 1 NC_010407.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 330712 rpsQ 6158956 rpsQ Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S17 YP_001709074.1 330410 D 31964 CDS YP_001709075.1 170780743 6156272 330723..331109 1 NC_010407.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 331109 rplN 6156272 rplN Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L14 YP_001709075.1 330723 D 31964 CDS YP_001709076.1 170780744 6156273 331112..331471 1 NC_010407.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 331471 rplX 6156273 rplX Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L24 YP_001709076.1 331112 D 31964 CDS YP_001709077.1 170780745 6156274 331474..332070 1 NC_010407.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 332070 rplE 6156274 rplE Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L5 YP_001709077.1 331474 D 31964 CDS YP_001709078.1 170780746 6156275 332236..332607 1 NC_010407.1 30S ribosomal protein S8 332607 6156275 CMS_0296 Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S8 YP_001709078.1 332236 D 31964 CDS YP_001709079.1 170780747 6156276 332612..333148 1 NC_010407.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 333148 rplF 6156276 rplF Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L6 YP_001709079.1 332612 D 31964 CDS YP_001709080.1 170780748 6156277 333145..333522 1 NC_010407.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 333522 rplR 6156277 rplR Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L18 YP_001709080.1 333145 D 31964 CDS YP_001709081.1 170780749 6156278 333564..334223 1 NC_010407.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 334223 rpsE 6156278 rpsE Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S5 YP_001709081.1 333564 D 31964 CDS YP_001709082.1 170780750 6156279 334223..334405 1 NC_010407.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 334405 rpmD 6156279 rpmD Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L30 YP_001709082.1 334223 D 31964 CDS YP_001709083.1 170780751 6156280 334438..334983 1 NC_010407.1 late assembly protein; 50S ribosomal protein L15 334983 rplO 6156280 rplO Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L15 YP_001709083.1 334438 D 31964 CDS YP_001709084.1 170780752 6158948 335109..336431 1 NC_010407.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 336431 secY 6158948 secY Clavibacter michiganensis subsp. sepedonicus preprotein translocase subunit SecY YP_001709084.1 335109 D 31964 CDS YP_001709085.1 170780753 6156281 336428..337030 1 NC_010407.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 337030 adk 6156281 adk Clavibacter michiganensis subsp. sepedonicus adenylate kinase YP_001709085.1 336428 D 31964 CDS YP_001709086.1 170780754 6156282 337035..337871 1 NC_010407.1 methionine aminopeptidase 337871 6156282 CMS_0304 Clavibacter michiganensis subsp. sepedonicus methionine aminopeptidase YP_001709086.1 337035 D 31964 CDS YP_001709087.1 170780755 6156283 complement(337920..339899) 1 NC_010407.1 PTS system antitermination regulator 339899 licR 6156283 licR Clavibacter michiganensis subsp. sepedonicus PTS system antitermination regulator YP_001709087.1 337920 R 31964 CDS YP_001709088.1 170780756 6158791 340111..340491 1 NC_010407.1 PTS system sugar-binding transporter subunit IIB 340491 6158791 CMS_0306 Clavibacter michiganensis subsp. sepedonicus PTS system sugar-binding transporter subunit IIB YP_001709088.1 340111 D 31964 CDS YP_001709089.1 170780757 6156284 340603..340869 1 NC_010407.1 phosphocarrier protein HPr 340869 ptsH 6156284 ptsH Clavibacter michiganensis subsp. sepedonicus phosphocarrier protein HPr YP_001709089.1 340603 D 31964 CDS YP_001709090.1 170780758 6158890 340932..342536 1 NC_010407.1 phosphoenolpyruvate-protein phosphotransferase 342536 ptsI 6158890 ptsI Clavibacter michiganensis subsp. sepedonicus phosphoenolpyruvate-protein phosphotransferase YP_001709090.1 340932 D 31964 CDS YP_001709091.1 170780759 6158892 342666..344195 1 NC_010407.1 PTS system transporter subunit IIABC 344195 mtlA 6158892 mtlA Clavibacter michiganensis subsp. sepedonicus PTS system transporter subunit IIABC YP_001709091.1 342666 D 31964 CDS YP_001709092.1 170780760 6158826 344305..344742 1 NC_010407.1 PTS system transporter subunit IIA 344742 mtlF 6158826 mtlF Clavibacter michiganensis subsp. sepedonicus PTS system transporter subunit IIA YP_001709092.1 344305 D 31964 CDS YP_001709093.1 170780761 6158828 344739..345908 1 NC_010407.1 mannitol-1-phosphate 5-dehydrogenase 345908 mtlD 6158828 mtlD Clavibacter michiganensis subsp. sepedonicus mannitol-1-phosphate 5-dehydrogenase YP_001709093.1 344739 D 31964 CDS YP_001709094.1 170780762 6158827 346161..346382 1 NC_010407.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 346382 infA 6158827 infA Clavibacter michiganensis subsp. sepedonicus translation initiation factor IF-1 YP_001709094.1 346161 D 31964 CDS YP_001709095.1 170780763 6158770 346455..346568 1 NC_010407.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 346568 rpmJ 6158770 rpmJ Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L36 YP_001709095.1 346455 D 31964 CDS YP_001709096.1 170780764 6156285 346724..347098 1 NC_010407.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 347098 rpsM 6156285 rpsM Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S13 YP_001709096.1 346724 D 31964 CDS YP_001709097.1 170780765 6156286 347144..347542 1 NC_010407.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 347542 6156286 CMS_0315 Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S11 YP_001709097.1 347144 D 31964 CDS YP_001709098.1 170780766 6156287 347704..348699 1 NC_010407.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 348699 6156287 CMS_0316 Clavibacter michiganensis subsp. sepedonicus DNA-directed RNA polymerase subunit alpha YP_001709098.1 347704 D 31964 CDS YP_001709099.1 170780767 6156288 348752..349315 1 NC_010407.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 349315 rplQ 6156288 rplQ Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L17 YP_001709099.1 348752 D 31964 CDS YP_001709100.1 170780768 6156289 349435..350505 1 NC_010407.1 N-acetyltransferase 350505 6156289 CMS_0318 Clavibacter michiganensis subsp. sepedonicus N-acetyltransferase YP_001709100.1 349435 D 31964 CDS YP_001709101.1 170780769 6156290 350535..351506 1 NC_010407.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 351506 truA 6156290 truA Clavibacter michiganensis subsp. sepedonicus tRNA pseudouridine synthase A YP_001709101.1 350535 D 31964 CDS YP_001709102.1 170780770 6156291 351585..352103 1 NC_010407.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 352103 rplM 6156291 rplM Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L13 YP_001709102.1 351585 D 31964 CDS YP_001709103.1 170780771 6156292 352154..352639 1 NC_010407.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 352639 rpsI 6156292 rpsI Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S9 YP_001709103.1 352154 D 31964 CDS YP_001709104.1 170780772 6156293 352663..354012 1 NC_010407.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 354012 glmM 6156293 glmM Clavibacter michiganensis subsp. sepedonicus phosphoglucosamine mutase YP_001709104.1 352663 D 31964 CDS YP_001709105.1 170780773 6156294 complement(354009..354971) 1 NC_010407.1 N/R; insertion element ISCmi2 transposase 354971 6156294 CMS_0323 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709105.1 354009 R 31964 CDS YP_001709106.1 170780774 6156295 355170..356132 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 356132 6156295 CMS_0324 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709106.1 355170 D 31964 CDS YP_001709107.1 170780775 6156296 356199..356639 1 NC_010407.1 hypothetical protein 356639 6156296 CMS_0325 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709107.1 356199 D 31964 CDS YP_001709108.1 170780776 6156297 complement(356668..356904) 1 NC_010407.1 DNA-binding protein 356904 6156297 CMS_0326 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001709108.1 356668 R 31964 CDS YP_001709109.1 170780777 6156298 complement(356904..357500) 1 NC_010407.1 hypothetical protein 357500 6156298 CMS_0327 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709109.1 356904 R 31964 CDS YP_001709110.1 170780778 6156299 complement(357629..358009) 1 NC_010407.1 hypothetical protein 358009 6156299 CMS_0328 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709110.1 357629 R 31964 CDS YP_001709111.1 170780779 6156300 complement(358507..359301) 1 NC_010407.1 hypothetical protein 359301 6156300 CMS_0329 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709111.1 358507 R 31964 CDS YP_001709112.1 170780780 6156302 complement(360610..360948) 1 NC_010407.1 hypothetical protein 360948 6156302 CMS_0331 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709112.1 360610 R 31964 CDS YP_001709113.1 170780781 6156303 361289..362263 1 NC_010407.1 hydrolase 362263 6156303 CMS_0332 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709113.1 361289 D 31964 CDS YP_001709114.1 170780782 6156304 362260..363288 1 NC_010407.1 hydrolase 363288 6156304 CMS_0333 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709114.1 362260 D 31964 CDS YP_001709115.1 170780783 6156305 363507..364277 1 NC_010407.1 hypothetical protein 364277 6156305 CMS_0334 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709115.1 363507 D 31964 CDS YP_001709116.1 170780784 6156306 364308..365240 1 NC_010407.1 ABC transporter ATP-binding protein 365240 6156306 CMS_0335 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001709116.1 364308 D 31964 CDS YP_001709117.1 170780785 6156307 365237..366226 1 NC_010407.1 binding-protein-dependent transport lipoprotein 366226 6156307 CMS_0336 Clavibacter michiganensis subsp. sepedonicus binding-protein-dependent transport lipoprotein YP_001709117.1 365237 D 31964 CDS YP_001709118.1 170780786 6156308 366241..368397 1 NC_010407.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 368397 6156308 CMS_0337 Clavibacter michiganensis subsp. sepedonicus iron-hydroxamate transporter permease subunit YP_001709118.1 366241 D 31964 CDS YP_001709119.1 170780787 6156309 369396..370919 1 NC_010407.1 two-component system sensor kinase 370919 6156309 CMS_0338 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001709119.1 369396 D 31964 CDS YP_001709120.1 170780788 6156310 370916..371608 1 NC_010407.1 two-component system response regulator 371608 6156310 CMS_0339 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001709120.1 370916 D 31964 CDS YP_001709121.1 170780789 6156311 complement(371625..372827) 1 NC_010407.1 hypothetical protein 372827 6156311 CMS_0340 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709121.1 371625 R 31964 CDS YP_001709122.1 170780790 6156312 373126..373638 1 NC_010407.1 hypothetical protein 373638 6156312 CMS_0341 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709122.1 373126 D 31964 CDS YP_001709123.1 170780791 6156313 373687..374091 1 NC_010407.1 tautomerase 374091 6156313 CMS_0342 Clavibacter michiganensis subsp. sepedonicus tautomerase YP_001709123.1 373687 D 31964 CDS YP_001709124.1 170780792 6156314 complement(374115..374627) 1 NC_010407.1 acetyltransferase 374627 6156314 CMS_0343 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001709124.1 374115 R 31964 CDS YP_001709125.1 170780793 6156315 complement(374659..375741) 1 NC_010407.1 hypothetical protein 375741 6156315 CMS_0344 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709125.1 374659 R 31964 CDS YP_001709126.1 170780794 6156316 complement(375787..377481) 1 NC_010407.1 metallo-beta-lactamase family hydrolase 377481 6156316 CMS_0345 Clavibacter michiganensis subsp. sepedonicus metallo-beta-lactamase family hydrolase YP_001709126.1 375787 R 31964 CDS YP_001709127.1 170780795 6156317 377975..379507 1 NC_010407.1 sulfate transporter 379507 6156317 CMS_0346 Clavibacter michiganensis subsp. sepedonicus sulfate transporter YP_001709127.1 377975 D 31964 CDS YP_001709128.1 170780796 6156318 complement(379662..379853) 1 NC_010407.1 hypothetical protein 379853 6156318 CMS_0347 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709128.1 379662 R 31964 CDS YP_001709129.1 170780797 6156319 379969..381348 1 NC_010407.1 aldehyde dehydrogenase 381348 6156319 CMS_0348 Clavibacter michiganensis subsp. sepedonicus aldehyde dehydrogenase YP_001709129.1 379969 D 31964 CDS YP_001709130.1 170780798 6156320 complement(381221..382498) 1 NC_010407.1 Suspiciously late stop codon; hypothetical protein 382498 6156320 CMS_0349 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709130.1 381221 R 31964 CDS YP_001709131.1 170780799 6156321 complement(382847..383149) 1 NC_010407.1 hypothetical protein 383149 6156321 CMS_0350 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709131.1 382847 R 31964 CDS YP_001709132.1 170780800 6156322 383239..384447 1 NC_010407.1 aminotransferase 384447 6156322 CMS_0351 Clavibacter michiganensis subsp. sepedonicus aminotransferase YP_001709132.1 383239 D 31964 CDS YP_001709133.1 170780801 6156323 384459..385646 1 NC_010407.1 methyltransferase 385646 6156323 CMS_0352 Clavibacter michiganensis subsp. sepedonicus methyltransferase YP_001709133.1 384459 D 31964 CDS YP_001709134.1 170780802 6156324 385733..387031 1 NC_010407.1 o-acetylhomoserine 387031 6156324 CMS_0353 Clavibacter michiganensis subsp. sepedonicus o-acetylhomoserine YP_001709134.1 385733 D 31964 CDS YP_001709135.1 170780803 6156325 387109..388482 1 NC_010407.1 hypothetical protein 388482 6156325 CMS_0354 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709135.1 387109 D 31964 CDS YP_001709136.1 170780804 6156326 complement(388428..389228) 1 NC_010407.1 TetR family transcriptional regulator 389228 6156326 CMS_0355 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709136.1 388428 R 31964 CDS YP_001709137.1 170780805 6156327 389249..390769 1 NC_010407.1 transport protein 390769 6156327 CMS_0356 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709137.1 389249 D 31964 CDS YP_001709138.1 170780806 6156328 390864..391718 1 NC_010407.1 hydrolase 391718 6156328 CMS_0357 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709138.1 390864 D 31964 CDS YP_001709139.1 170780807 6156329 391711..392301 1 NC_010407.1 TetR family transcriptional regulator 392301 6156329 CMS_0358 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709139.1 391711 D 31964 CDS YP_001709140.1 170780808 6156330 complement(392312..393244) 1 NC_010407.1 hypothetical protein 393244 6156330 CMS_0359 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709140.1 392312 R 31964 CDS YP_001709141.1 170780809 6156331 complement(393344..393946) 1 NC_010407.1 TetR family transcriptional regulator 393946 6156331 CMS_0360 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709141.1 393344 R 31964 CDS YP_001709142.1 170780810 6156332 394206..395306 1 NC_010407.1 oxidoreductase 395306 6156332 CMS_0361 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709142.1 394206 D 31964 CDS YP_001709143.1 170780811 6156333 395303..396115 1 NC_010407.1 hypothetical protein 396115 6156333 CMS_0362 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709143.1 395303 D 31964 CDS YP_001709144.1 170780812 6156334 396170..397492 1 NC_010407.1 solute-binding lipoprotein 397492 6156334 CMS_0363 Clavibacter michiganensis subsp. sepedonicus solute-binding lipoprotein YP_001709144.1 396170 D 31964 CDS YP_001709145.1 170780813 6156335 397544..398530 1 NC_010407.1 transport protein 398530 6156335 CMS_0364 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709145.1 397544 D 31964 CDS YP_001709146.1 170780814 6156336 398527..399408 1 NC_010407.1 transport protein 399408 6156336 CMS_0365 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709146.1 398527 D 31964 CDS YP_001709147.1 170780815 6156337 complement(399486..399830) 1 NC_010407.1 hypothetical protein 399830 6156337 CMS_0366 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709147.1 399486 R 31964 CDS YP_001709148.1 170780816 6156338 complement(399833..400291) 1 NC_010407.1 hypothetical protein 400291 6156338 CMS_0367 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709148.1 399833 R 31964 CDS YP_001709149.1 170780817 6156339 complement(400301..402187) 1 NC_010407.1 hydrolase 402187 6156339 CMS_0368 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709149.1 400301 R 31964 CDS YP_001709150.1 170780818 6156341 complement(403540..406173) 1 NC_010407.1 hypothetical protein 406173 6156341 CMS_0370 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709150.1 403540 R 31964 CDS YP_001709151.1 170780819 6156342 406235..406822 1 NC_010407.1 TetR family transcriptional regulator 406822 6156342 CMS_0371 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709151.1 406235 D 31964 CDS YP_001709152.1 170780820 6156343 complement(406825..408645) 1 NC_010407.1 hypothetical protein 408645 6156343 CMS_0372 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709152.1 406825 R 31964 CDS YP_001709153.1 170780821 6156344 complement(409076..410023) 1 NC_010407.1 transport protein 410023 6156344 CMS_0373 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709153.1 409076 R 31964 CDS YP_001709154.1 170780822 6156345 complement(410016..410921) 1 NC_010407.1 transport protein 410921 6156345 CMS_0374 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709154.1 410016 R 31964 CDS YP_001709155.1 170780823 6156347 412525..413967 1 NC_010407.1 hypothetical protein 413967 6156347 CMS_0376 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709155.1 412525 D 31964 CDS YP_001709156.1 170780824 6156348 413969..415204 1 NC_010407.1 dehydrogenase 415204 6156348 CMS_0377 Clavibacter michiganensis subsp. sepedonicus dehydrogenase YP_001709156.1 413969 D 31964 CDS YP_001709157.1 170780825 6156349 415201..416325 1 NC_010407.1 hypothetical protein 416325 6156349 CMS_0378 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709157.1 415201 D 31964 CDS YP_001709158.1 170780826 6156350 416514..417428 1 NC_010407.1 phophoesterase 417428 6156350 CMS_0379 Clavibacter michiganensis subsp. sepedonicus phophoesterase YP_001709158.1 416514 D 31964 CDS YP_001709159.1 170780827 6159114 417755..418165 1 NC_010407.1 hypothetical protein 418165 6159114 CMS_0380 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709159.1 417755 D 31964 CDS YP_001709160.1 170780828 6156351 418256..418678 1 NC_010407.1 hypothetical protein 418678 6156351 CMS_0381 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709160.1 418256 D 31964 CDS YP_001709161.1 170780829 6156352 complement(418697..418828) 1 NC_010407.1 May be a gene remnant; hypothetical protein 418828 6156352 CMS_0382 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709161.1 418697 R 31964 CDS YP_001709162.1 170780830 6156353 complement(419042..419971) 1 NC_010407.1 Homolog in Aeromonas hydrophila only identified in subtractive hybridisation between virulent and avirulent strains. Lies in low GC region.; hypothetical protein 419971 6156353 CMS_0383 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709162.1 419042 R 31964 CDS YP_001709163.1 170780831 6156354 complement(420078..421010) 1 NC_010407.1 Homolog in Aeromonas hydrophila only identified in subtractive hybridisation between virulent and avirulent strains. Lies in low GC region.; ATP-binding protein 421010 6156354 CMS_0384 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001709163.1 420078 R 31964 CDS YP_001709164.1 170780832 6156355 complement(421019..421918) 1 NC_010407.1 bacteriophage protein 421918 6156355 CMS_0385 Clavibacter michiganensis subsp. sepedonicus bacteriophage protein YP_001709164.1 421019 R 31964 CDS YP_001709165.1 170780833 6156356 complement(422030..423094) 1 NC_010407.1 monooxygenase 423094 6156356 CMS_0386 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001709165.1 422030 R 31964 CDS YP_001709166.1 170780834 6156357 complement(423174..423329) 1 NC_010407.1 Possible gene remnant; hypothetical protein 423329 6156357 CMS_0387 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709166.1 423174 R 31964 CDS YP_001709167.1 170780835 6156358 423399..423743 1 NC_010407.1 hypothetical protein 423743 6156358 CMS_0388 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709167.1 423399 D 31964 CDS YP_001709168.1 170780836 6156359 complement(423740..423895) 1 NC_010407.1 hypothetical protein 423895 6156359 CMS_0389 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709168.1 423740 R 31964 CDS YP_001709169.1 170780837 6156360 complement(423966..424541) 1 NC_010407.1 TetR family transcriptional regulator 424541 6156360 CMS_0390 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709169.1 423966 R 31964 CDS YP_001709170.1 170780838 6156361 424639..425760 1 NC_010407.1 dehydrogenase 425760 6156361 CMS_0391 Clavibacter michiganensis subsp. sepedonicus dehydrogenase YP_001709170.1 424639 D 31964 CDS YP_001709171.1 170780839 6156362 425858..426820 1 NC_010407.1 N/R/C?; insertion element IS1121 transposase 426820 6156362 CMS_0392 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709171.1 425858 D 31964 CDS YP_001709172.1 170780840 6156363 complement(426839..427600) 1 NC_010407.1 hypothetical protein 427600 6156363 CMS_0393 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709172.1 426839 R 31964 CDS YP_001709173.1 170780841 6156365 complement(428188..429036) 1 NC_010407.1 hypothetical protein 429036 6156365 CMS_0395 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709173.1 428188 R 31964 CDS YP_001709174.1 170780842 6156366 429146..429751 1 NC_010407.1 oxidoreductase 429751 6156366 CMS_0396 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709174.1 429146 D 31964 CDS YP_001709175.1 170780843 6156367 complement(429865..430272) 1 NC_010407.1 hypothetical protein 430272 6156367 CMS_0397 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709175.1 429865 R 31964 CDS YP_001709176.1 170780844 6156368 430504..431952 1 NC_010407.1 beta-lactamase 431952 6156368 CMS_0398 Clavibacter michiganensis subsp. sepedonicus beta-lactamase YP_001709176.1 430504 D 31964 CDS YP_001709177.1 170780845 6156369 431970..433313 1 NC_010407.1 phosphatase 433313 6156369 CMS_0399 Clavibacter michiganensis subsp. sepedonicus phosphatase YP_001709177.1 431970 D 31964 CDS YP_001709178.1 170780846 6156370 complement(433392..435272) 1 NC_010407.1 Possibly sortase sorted; amidase 435272 6156370 CMS_0400 Clavibacter michiganensis subsp. sepedonicus amidase YP_001709178.1 433392 R 31964 CDS YP_001709179.1 170780847 6156371 complement(435397..435579) 1 NC_010407.1 DNA-binding protein 435579 6156371 CMS_0401 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001709179.1 435397 R 31964 CDS YP_001709180.1 170780848 6156372 435707..436426 1 NC_010407.1 RNA-binding protein 436426 6156372 CMS_0402 Clavibacter michiganensis subsp. sepedonicus RNA-binding protein YP_001709180.1 435707 D 31964 CDS YP_001709181.1 170780849 6156373 complement(436514..437527) 1 NC_010407.1 sigma factor 437527 6156373 CMS_0403 Clavibacter michiganensis subsp. sepedonicus sigma factor YP_001709181.1 436514 R 31964 CDS YP_001709182.1 170780850 6156374 437782..439314 1 NC_010407.1 cationic amino acid transporter 439314 6156374 CMS_0404 Clavibacter michiganensis subsp. sepedonicus cationic amino acid transporter YP_001709182.1 437782 D 31964 CDS YP_001709183.1 170780851 6156375 complement(439409..440212) 1 NC_010407.1 DNA glycosylase 440212 6156375 CMS_0405 Clavibacter michiganensis subsp. sepedonicus DNA glycosylase YP_001709183.1 439409 R 31964 CDS YP_001709184.1 170780852 6156376 complement(440240..445843) 1 NC_010407.1 ATP-dependent DNA helicase 445843 6156376 CMS_0406 Clavibacter michiganensis subsp. sepedonicus ATP-dependent DNA helicase YP_001709184.1 440240 R 31964 CDS YP_001709185.1 170780853 6156377 445954..446508 1 NC_010407.1 hypothetical protein 446508 6156377 CMS_0407 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709185.1 445954 D 31964 CDS YP_001709186.1 170780854 6156378 complement(446555..447178) 1 NC_010407.1 TetR family transcriptional regulator 447178 6156378 CMS_0408 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709186.1 446555 R 31964 CDS YP_001709187.1 170780855 6156379 complement(447357..448898) 1 NC_010407.1 DEAD/DEAH box helicase 448898 6156379 CMS_0410 Clavibacter michiganensis subsp. sepedonicus DEAD/DEAH box helicase YP_001709187.1 447357 R 31964 CDS YP_001709188.1 170780856 6156380 complement(449137..449784) 1 NC_010407.1 hypothetical protein 449784 6156380 CMS_0411 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709188.1 449137 R 31964 CDS YP_001709189.1 170780857 6156381 complement(449838..450413) 1 NC_010407.1 hypothetical protein 450413 6156381 CMS_0412 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709189.1 449838 R 31964 CDS YP_001709190.1 170780858 6156382 450462..450983 1 NC_010407.1 hypothetical protein 450983 6156382 CMS_0413 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709190.1 450462 D 31964 CDS YP_001709191.1 170780859 6156383 450967..451557 1 NC_010407.1 hypothetical protein 451557 6156383 CMS_0414 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709191.1 450967 D 31964 CDS YP_001709192.1 170780860 6156384 451671..451973 1 NC_010407.1 hypothetical protein 451973 6156384 CMS_0415 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709192.1 451671 D 31964 CDS YP_001709193.1 170780861 6156385 complement(451987..452691) 1 NC_010407.1 hypothetical protein 452691 6156385 CMS_0416 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709193.1 451987 R 31964 CDS YP_001709194.1 170780862 6156386 complement(452688..453173) 1 NC_010407.1 bacteriophage protein 453173 6156386 CMS_0417 Clavibacter michiganensis subsp. sepedonicus bacteriophage protein YP_001709194.1 452688 R 31964 CDS YP_001709195.1 170780863 6156387 complement(453228..453758) 1 NC_010407.1 hypothetical protein 453758 6156387 CMS_0418 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709195.1 453228 R 31964 CDS YP_001709196.1 170780864 6156388 complement(453769..454953) 1 NC_010407.1 oxidoreductase 454953 6156388 CMS_0419 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709196.1 453769 R 31964 CDS YP_001709197.1 170780865 6156389 complement(455000..455788) 1 NC_010407.1 hypothetical protein 455788 6156389 CMS_0420 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709197.1 455000 R 31964 CDS YP_001709198.1 170780866 6156390 complement(455867..456829) 1 NC_010407.1 Nu/R; insertion element ISCmi2 transposase 456829 6156390 CMS_0421 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709198.1 455867 R 31964 CDS YP_001709199.1 170780867 6156391 456940..457989 1 NC_010407.1 lipoate-protein ligase 457989 6156391 CMS_0422 Clavibacter michiganensis subsp. sepedonicus lipoate-protein ligase YP_001709199.1 456940 D 31964 CDS YP_001709200.1 170780868 6156392 complement(458248..458532) 1 NC_010407.1 hypothetical protein 458532 6156392 CMS_0423 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709200.1 458248 R 31964 CDS YP_001709201.1 170780869 6156393 458556..459533 1 NC_010407.1 hypothetical protein 459533 6156393 CMS_0424 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709201.1 458556 D 31964 CDS YP_001709202.1 170780870 6156394 complement(459541..460020) 1 NC_010407.1 hypothetical protein 460020 6156394 CMS_0425 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709202.1 459541 R 31964 CDS YP_001709203.1 170780871 6156395 complement(460103..461779) 1 NC_010407.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 461779 pgm 6156395 pgm Clavibacter michiganensis subsp. sepedonicus phosphoglucomutase YP_001709203.1 460103 R 31964 CDS YP_001709204.1 170780872 6158863 461793..462761 1 NC_010407.1 prephenate dehydratase 462761 pheA 6158863 pheA Clavibacter michiganensis subsp. sepedonicus prephenate dehydratase YP_001709204.1 461793 D 31964 CDS YP_001709205.1 170780873 6158864 complement(462758..464014) 1 NC_010407.1 amino acid transporter 464014 6158864 CMS_0428 Clavibacter michiganensis subsp. sepedonicus amino acid transporter YP_001709205.1 462758 R 31964 CDS YP_001709206.1 170780874 6156396 464259..465539 1 NC_010407.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 465539 6156396 CMS_0429 Clavibacter michiganensis subsp. sepedonicus seryl-tRNA synthetase YP_001709206.1 464259 D 31964 CDS YP_001709207.1 170780875 6156397 465536..466357 1 NC_010407.1 hypothetical protein 466357 6156397 CMS_0430 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709207.1 465536 D 31964 CDS YP_001709208.1 170780876 6159059 466620..467879 1 NC_010407.1 hypothetical protein 467879 6159059 CMS_0431 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709208.1 466620 D 31964 CDS YP_001709209.1 170780877 6159060 468453..469019 1 NC_010407.1 hypothetical protein 469019 6159060 CMS_0432 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709209.1 468453 D 31964 CDS YP_001709210.1 170780878 6156400 469117..470079 1 NC_010407.1 Nu; insertion element ISCmi2 transposase 470079 6156400 CMS_0433 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709210.1 469117 D 31964 CDS YP_001709211.1 170780879 6156401 470156..471244 1 NC_010407.1 LacI family transcriptional regulator 471244 6156401 CMS_0434 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001709211.1 470156 D 31964 CDS YP_001709212.1 170780880 6156402 471416..472114 1 NC_010407.1 hypothetical protein 472114 6156402 CMS_0435 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709212.1 471416 D 31964 CDS YP_001709213.1 170780881 6156403 472132..473208 1 NC_010407.1 oxidoreductase 473208 6156403 CMS_0436 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709213.1 472132 D 31964 CDS YP_001709214.1 170780882 6156404 473300..473647 1 NC_010407.1 hypothetical protein 473647 6156404 CMS_0437 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709214.1 473300 D 31964 CDS YP_001709215.1 170780883 6156405 complement(473693..475048) 1 NC_010407.1 alpha amylase 475048 6156405 CMS_0438 Clavibacter michiganensis subsp. sepedonicus alpha amylase YP_001709215.1 473693 R 31964 CDS YP_001709216.1 170780884 6156407 complement(475684..476748) 1 NC_010407.1 Frameplot suggests that this CDS does not have a legitimate translational stop; hypothetical protein 476748 6156407 CMS_0440 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709216.1 475684 R 31964 CDS YP_001709217.1 170780885 6156408 complement(476745..477161) 1 NC_010407.1 PadR family transcriptional regulator 477161 6156408 CMS_0441 Clavibacter michiganensis subsp. sepedonicus PadR family transcriptional regulator YP_001709217.1 476745 R 31964 CDS YP_001709218.1 170780886 6156409 477274..477675 1 NC_010407.1 hypothetical protein 477675 6156409 CMS_0442 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709218.1 477274 D 31964 CDS YP_001709219.1 170780887 6156410 477779..478546 1 NC_010407.1 hypothetical protein 478546 6156410 CMS_0443 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709219.1 477779 D 31964 CDS YP_001709220.1 170780888 6156411 478656..479519 1 NC_010407.1 hypothetical protein 479519 6156411 CMS_0444 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709220.1 478656 D 31964 CDS YP_001709221.1 170780889 6156412 479632..480174 1 NC_010407.1 hydophilic protein 480174 6156412 CMS_0445 Clavibacter michiganensis subsp. sepedonicus hydophilic protein YP_001709221.1 479632 D 31964 CDS YP_001709222.1 170780890 6156413 complement(480185..481147) 1 NC_010407.1 Nu; insertion element IS1121 transposase 481147 6156413 CMS_0446 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709222.1 480185 R 31964 CDS YP_001709223.1 170780891 6156414 481284..482318 1 NC_010407.1 aldoketoreductase 482318 6156414 CMS_0447 Clavibacter michiganensis subsp. sepedonicus aldoketoreductase YP_001709223.1 481284 D 31964 CDS YP_001709224.1 170780892 6156415 482522..483271 1 NC_010407.1 acetyl transferase 483271 6156415 CMS_0448 Clavibacter michiganensis subsp. sepedonicus acetyl transferase YP_001709224.1 482522 D 31964 CDS YP_001709225.1 170780893 6156416 complement(483565..484050) 1 NC_010407.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 484050 6156416 CMS_0449 Clavibacter michiganensis subsp. sepedonicus aspartate alpha-decarboxylase YP_001709225.1 483565 R 31964 CDS YP_001709226.1 170780894 6156417 484260..485351 1 NC_010407.1 hypothetical protein 485351 6156417 CMS_0450 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709226.1 484260 D 31964 CDS YP_001709227.1 170780895 6156418 complement(485394..486920) 1 NC_010407.1 deoxyribodipyrimidine photolyase 486920 6156418 CMS_0451 Clavibacter michiganensis subsp. sepedonicus deoxyribodipyrimidine photolyase YP_001709227.1 485394 R 31964 CDS YP_001709228.1 170780896 6156420 complement(488469..489431) 1 NC_010407.1 N/R/C; insertion element IS1121 transposase 489431 6156420 CMS_0453 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709228.1 488469 R 31964 CDS YP_001709229.1 170780897 6156421 complement(489529..490365) 1 NC_010407.1 hypothetical protein 490365 6156421 CMS_0454 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709229.1 489529 R 31964 CDS YP_001709230.1 170780898 6156422 complement(490501..490860) 1 NC_010407.1 hypothetical protein 490860 6156422 CMS_0455 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709230.1 490501 R 31964 CDS YP_001709231.1 170780899 6156423 complement(490887..491435) 1 NC_010407.1 hypothetical protein 491435 6156423 CMS_0456 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709231.1 490887 R 31964 CDS YP_001709232.1 170780900 6156424 complement(491478..492122) 1 NC_010407.1 lipolytic enzyme 492122 6156424 CMS_0457 Clavibacter michiganensis subsp. sepedonicus lipolytic enzyme YP_001709232.1 491478 R 31964 CDS YP_001709233.1 170780901 6156425 complement(492309..493013) 1 NC_010407.1 turgor pressure regulator 493013 6156425 CMS_0458 Clavibacter michiganensis subsp. sepedonicus turgor pressure regulator YP_001709233.1 492309 R 31964 CDS YP_001709234.1 170780902 6156426 complement(493010..495406) 1 NC_010407.1 turgor pressure sensor 495406 6156426 CMS_0459 Clavibacter michiganensis subsp. sepedonicus turgor pressure sensor YP_001709234.1 493010 R 31964 CDS YP_001709235.1 170780903 6156427 complement(495578..496186) 1 NC_010407.1 cation transport ATPase component 496186 6156427 CMS_0460 Clavibacter michiganensis subsp. sepedonicus cation transport ATPase component YP_001709235.1 495578 R 31964 CDS YP_001709236.1 170780904 6156428 complement(496219..498372) 1 NC_010407.1 cation transport ATPase component 498372 kdpB 6156428 kdpB Clavibacter michiganensis subsp. sepedonicus cation transport ATPase component YP_001709236.1 496219 R 31964 CDS YP_001709237.1 170780905 6158780 complement(498369..500045) 1 NC_010407.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 500045 6158780 CMS_0462 Clavibacter michiganensis subsp. sepedonicus potassium-transporting ATPase subunit A YP_001709237.1 498369 R 31964 CDS YP_001709238.1 170780906 6156429 complement(500146..500325) 1 NC_010407.1 hypothetical protein 500325 6156429 CMS_0463 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709238.1 500146 R 31964 CDS YP_001709239.1 170780907 6156430 complement(500429..500752) 1 NC_010407.1 hypothetical protein 500752 6156430 CMS_0464 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709239.1 500429 R 31964 CDS YP_001709240.1 170780908 6156431 complement(500847..502169) 1 NC_010407.1 hypothetical protein 502169 6156431 CMS_0465 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709240.1 500847 R 31964 CDS YP_001709241.1 170780909 6156432 complement(502162..502431) 1 NC_010407.1 DNA-binding protein 502431 6156432 CMS_0466 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001709241.1 502162 R 31964 CDS YP_001709242.1 170780910 6156433 complement(502509..503309) 1 NC_010407.1 hypothetical protein 503309 6156433 CMS_0467 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709242.1 502509 R 31964 CDS YP_001709243.1 170780911 6156434 complement(503317..503943) 1 NC_010407.1 hypothetical protein 503943 6156434 CMS_0468 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709243.1 503317 R 31964 CDS YP_001709244.1 170780912 6156435 504445..505146 1 NC_010407.1 regulatory protein 505146 6156435 CMS_0469 Clavibacter michiganensis subsp. sepedonicus regulatory protein YP_001709244.1 504445 D 31964 CDS YP_001709245.1 170780913 6156436 505197..505925 1 NC_010407.1 hypothetical protein 505925 6156436 CMS_0470 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709245.1 505197 D 31964 CDS YP_001709246.1 170780914 6156437 complement(505957..506598) 1 NC_010407.1 hydrolase 506598 6156437 CMS_0471 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709246.1 505957 R 31964 CDS YP_001709247.1 170780915 6156438 506847..507347 1 NC_010407.1 hypothetical protein 507347 6156438 CMS_0472 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709247.1 506847 D 31964 CDS YP_001709248.1 170780916 6159061 complement(507603..508223) 1 NC_010407.1 two component response regulator 508223 6159061 CMS_0473 Clavibacter michiganensis subsp. sepedonicus two component response regulator YP_001709248.1 507603 R 31964 CDS YP_001709249.1 170780917 6156440 complement(508220..509398) 1 NC_010407.1 two component sensor kinase 509398 6156440 CMS_0474 Clavibacter michiganensis subsp. sepedonicus two component sensor kinase YP_001709249.1 508220 R 31964 CDS YP_001709250.1 170780918 6156441 509446..510669 1 NC_010407.1 ABC transport integral membrane protein 510669 6156441 CMS_0475 Clavibacter michiganensis subsp. sepedonicus ABC transport integral membrane protein YP_001709250.1 509446 D 31964 CDS YP_001709251.1 170780919 6156442 510666..511394 1 NC_010407.1 ABC transport ATP-binding protein 511394 6156442 CMS_0476 Clavibacter michiganensis subsp. sepedonicus ABC transport ATP-binding protein YP_001709251.1 510666 D 31964 CDS YP_001709252.1 170780920 6156443 complement(511860..512510) 1 NC_010407.1 Frameplot suggests that the coding sequence may extend downstream; hypothetical protein 512510 6156443 CMS_0477 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709252.1 511860 R 31964 CDS YP_001709253.1 170780921 6156444 complement(512610..513452) 1 NC_010407.1 hypothetical protein 513452 6156444 CMS_0478 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709253.1 512610 R 31964 CDS YP_001709254.1 170780922 6156445 complement(513436..514029) 1 NC_010407.1 hypothetical protein 514029 6156445 CMS_0479 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709254.1 513436 R 31964 CDS YP_001709255.1 170780923 6156447 complement(514492..515454) 1 NC_010407.1 P/R/C Part of NRPS disruption. The apparent cargo may have arrived after the recombination; insertion element IS1121 transposase 515454 6156447 CMS_0481 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709255.1 514492 R 31964 CDS YP_001709256.1 170780924 6156449 complement(517922..518290) 1 NC_010407.1 GntR family transcriptional regulator 518290 6156449 CMS_0483 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001709256.1 517922 R 31964 CDS YP_001709257.1 170780925 6156450 518414..518785 1 NC_010407.1 integral emmbrane protein 518785 6156450 CMS_0484 Clavibacter michiganensis subsp. sepedonicus integral emmbrane protein YP_001709257.1 518414 D 31964 CDS YP_001709258.1 170780926 6156451 complement(518796..519701) 1 NC_010407.1 hypothetical protein 519701 6156451 CMS_0485 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709258.1 518796 R 31964 CDS YP_001709259.1 170780927 6156452 complement(519958..520395) 1 NC_010407.1 AsnC family transcriptional regulator 520395 6156452 CMS_0486 Clavibacter michiganensis subsp. sepedonicus AsnC family transcriptional regulator YP_001709259.1 519958 R 31964 CDS YP_001709260.1 170780928 6156453 520474..521421 1 NC_010407.1 amidinotransferase 521421 6156453 CMS_0487 Clavibacter michiganensis subsp. sepedonicus amidinotransferase YP_001709260.1 520474 D 31964 CDS YP_001709261.1 170780929 6156454 521418..522707 1 NC_010407.1 ornithine aminotransferase 522707 6156454 CMS_0488 Clavibacter michiganensis subsp. sepedonicus ornithine aminotransferase YP_001709261.1 521418 D 31964 CDS YP_001709262.1 170780930 6156455 523490..523948 1 NC_010407.1 Similar to downstream CDS; hypothetical protein 523948 6156455 CMS_0489 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709262.1 523490 D 31964 CDS YP_001709263.1 170780931 6156456 524042..524458 1 NC_010407.1 Similar to upstream CDS; hypothetical protein 524458 6156456 CMS_0490 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709263.1 524042 D 31964 CDS YP_001709264.1 170780932 6156457 complement(524550..525434) 1 NC_010407.1 epimerase/dehydratase 525434 6156457 CMS_0491 Clavibacter michiganensis subsp. sepedonicus epimerase/dehydratase YP_001709264.1 524550 R 31964 CDS YP_001709265.1 170780933 6156458 complement(525431..525862) 1 NC_010407.1 hypothetical protein 525862 6156458 CMS_0492 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709265.1 525431 R 31964 CDS YP_001709266.1 170780934 6156459 complement(525859..526317) 1 NC_010407.1 transport protein 526317 6156459 CMS_0493 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709266.1 525859 R 31964 CDS YP_001709267.1 170780935 6156460 526545..527819 1 NC_010407.1 hypothetical protein 527819 6156460 CMS_0494 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709267.1 526545 D 31964 CDS YP_001709268.1 170780936 6156461 527856..528596 1 NC_010407.1 hypothetical protein 528596 6156461 CMS_0495 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709268.1 527856 D 31964 CDS YP_001709269.1 170780937 6156462 528763..529218 1 NC_010407.1 hypothetical protein 529218 6156462 CMS_0496 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709269.1 528763 D 31964 CDS YP_001709270.1 170780938 6156463 529221..529457 1 NC_010407.1 hypothetical protein 529457 6156463 CMS_0497 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709270.1 529221 D 31964 CDS YP_001709271.1 170780939 6156464 529746..530072 1 NC_010407.1 hypothetical protein 530072 6156464 CMS_0498 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709271.1 529746 D 31964 CDS YP_001709272.1 170780940 6156465 530286..530636 1 NC_010407.1 hypothetical protein 530636 6156465 CMS_0499 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709272.1 530286 D 31964 CDS YP_001709273.1 170780941 6156466 530689..531864 1 NC_010407.1 oxidoreductase 531864 6156466 CMS_0500 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709273.1 530689 D 31964 CDS YP_001709274.1 170780942 6156467 complement(531911..532633) 1 NC_010407.1 two-component system response regulator 532633 6156467 CMS_0501 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001709274.1 531911 R 31964 CDS YP_001709275.1 170780943 6156468 complement(532630..533775) 1 NC_010407.1 two-component system sensor kinase 533775 6156468 CMS_0502 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001709275.1 532630 R 31964 CDS YP_001709276.1 170780944 6156469 complement(533947..534303) 1 NC_010407.1 hypothetical protein 534303 6156469 CMS_0503 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709276.1 533947 R 31964 CDS YP_001709277.1 170780945 6156470 complement(534395..535012) 1 NC_010407.1 TetR family transcriptional regulator 535012 6156470 CMS_0504 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709277.1 534395 R 31964 CDS YP_001709278.1 170780946 6156471 535259..536638 1 NC_010407.1 transport protein 536638 6156471 CMS_0505 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709278.1 535259 D 31964 CDS YP_001709279.1 170780947 6156473 complement(537821..538882) 1 NC_010407.1 monooxygenase 538882 6156473 CMS_0508 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001709279.1 537821 R 31964 CDS YP_001709280.1 170780948 6156474 complement(538927..539892) 1 NC_010407.1 quinone oxidoreductase 539892 6156474 CMS_0509 Clavibacter michiganensis subsp. sepedonicus quinone oxidoreductase YP_001709280.1 538927 R 31964 CDS YP_001709281.1 170780949 6156475 complement(539924..540553) 1 NC_010407.1 hypothetical protein 540553 6156475 CMS_0510 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709281.1 539924 R 31964 CDS YP_001709282.1 170780950 6156476 complement(540553..541242) 1 NC_010407.1 hypothetical protein 541242 6156476 CMS_0511 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709282.1 540553 R 31964 CDS YP_001709283.1 170780951 6156477 541488..542441 1 NC_010407.1 cysteine synthase 542441 6156477 CMS_0512 Clavibacter michiganensis subsp. sepedonicus cysteine synthase YP_001709283.1 541488 D 31964 CDS YP_001709284.1 170780952 6156478 542444..543028 1 NC_010407.1 serine acetyltransferase 543028 cysE 6156478 cysE Clavibacter michiganensis subsp. sepedonicus serine acetyltransferase YP_001709284.1 542444 D 31964 CDS YP_001709285.1 170780953 6158650 543028..543684 1 NC_010407.1 tRNA/rRNA methyltransferase 543684 spoU 6158650 spoU Clavibacter michiganensis subsp. sepedonicus tRNA/rRNA methyltransferase YP_001709285.1 543028 D 31964 CDS YP_001709286.1 170780954 6158995 543785..544363 1 NC_010407.1 hypothetical protein 544363 6158995 CMS_0515 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709286.1 543785 D 31964 CDS YP_001709287.1 170780955 6156479 complement(544360..545322) 1 NC_010407.1 N/R/C; insertion element ISCmi2 transposase 545322 6156479 CMS_0516 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709287.1 544360 R 31964 CDS YP_001709288.1 170780956 6156480 complement(545512..546471) 1 NC_010407.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 546471 coaA 6156480 coaA Clavibacter michiganensis subsp. sepedonicus pantothenate kinase YP_001709288.1 545512 R 31964 CDS YP_001709289.1 170780957 6158638 546560..548410 1 NC_010407.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 548410 glmS 6158638 glmS Clavibacter michiganensis subsp. sepedonicus glucosamine--fructose-6-phosphate aminotransferase YP_001709289.1 546560 D 31964 CDS YP_001709290.1 170780958 6158720 548421..548780 1 NC_010407.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 548780 acpS 6158720 acpS Clavibacter michiganensis subsp. sepedonicus 4'-phosphopantetheinyl transferase YP_001709290.1 548421 D 31964 CDS YP_001709291.1 170780959 6158590 548777..549934 1 NC_010407.1 alanine racemase 549934 alr 6158590 alr Clavibacter michiganensis subsp. sepedonicus alanine racemase YP_001709291.1 548777 D 31964 CDS YP_001709292.1 170780960 6158594 549931..551667 1 NC_010407.1 Appears to be a fusion of an alanine racemase with an ATP-binding domain of unknown function; alanine racemase fusion protein 551667 alr* 6158594 alr* Clavibacter michiganensis subsp. sepedonicus alanine racemase fusion protein YP_001709292.1 549931 D 31964 CDS YP_001709293.1 170780961 6158595 551677..552294 1 NC_010407.1 hypothetical protein 552294 6158595 CMS_0522 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709293.1 551677 D 31964 CDS YP_001709294.1 170780962 6156481 552291..553910 1 NC_010407.1 C-terminal region similar to known O-sialoglycoprotein endopeptidase UniProt:GCP_PASHA (EMBL:A38108), N-terminal contains PF00583, GCN5-related N-acetyltransferase domain.; glycoprotein peptidase-acetyltransferase fusionprotein 553910 6156481 CMS_0523 Clavibacter michiganensis subsp. sepedonicus glycoprotein peptidase-acetyltransferase fusionprotein YP_001709294.1 552291 D 31964 CDS YP_001709295.1 170780963 6156482 554015..554440 1 NC_010407.1 hypothetical protein 554440 6156482 CMS_0524 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709295.1 554015 D 31964 CDS YP_001709296.1 170780964 6156483 complement(554530..555771) 1 NC_010407.1 hypothetical protein 555771 6156483 CMS_0525 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709296.1 554530 R 31964 CDS YP_001709297.1 170780965 6156484 555845..556174 1 NC_010407.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 556174 groES 6156484 groES Clavibacter michiganensis subsp. sepedonicus co-chaperonin GroES YP_001709297.1 555845 D 31964 CDS YP_001709298.1 170780966 6156485 556307..557260 1 NC_010407.1 hypothetical protein 557260 6156485 CMS_0527 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709298.1 556307 D 31964 CDS YP_001709299.1 170780967 6156486 557439..558719 1 NC_010407.1 extracellular ligand-binding protein 558719 6156486 CMS_0528 Clavibacter michiganensis subsp. sepedonicus extracellular ligand-binding protein YP_001709299.1 557439 D 31964 CDS YP_001709300.1 170780968 6156487 complement(558863..559540) 1 NC_010407.1 branched chain amino acid transport ATP-binding protein 559540 6156487 CMS_0529 Clavibacter michiganensis subsp. sepedonicus branched chain amino acid transport ATP-binding protein YP_001709300.1 558863 R 31964 CDS YP_001709301.1 170780969 6156488 complement(559618..560541) 1 NC_010407.1 branched chain amino acid transport ATP-binding protein 560541 6156488 CMS_0530 Clavibacter michiganensis subsp. sepedonicus branched chain amino acid transport ATP-binding protein YP_001709301.1 559618 R 31964 CDS YP_001709302.1 170780970 6156489 complement(560534..561505) 1 NC_010407.1 transport protein 561505 6156489 CMS_0531 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709302.1 560534 R 31964 CDS YP_001709303.1 170780971 6156490 complement(561512..562912) 1 NC_010407.1 transport protein 562912 6156490 CMS_0532 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709303.1 561512 R 31964 CDS YP_001709304.1 170780972 6156491 563210..564712 1 NC_010407.1 inosine-5'-monophosphate dehydrogenase 564712 6156491 CMS_0533 Clavibacter michiganensis subsp. sepedonicus inosine-5'-monophosphate dehydrogenase YP_001709304.1 563210 D 31964 CDS YP_001709305.1 170780973 6156492 564880..565980 1 NC_010407.1 hypothetical protein 565980 6156492 CMS_0534 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709305.1 564880 D 31964 CDS YP_001709306.1 170780974 6156493 565973..567091 1 NC_010407.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 567091 6156493 CMS_0535 Clavibacter michiganensis subsp. sepedonicus inosine 5-monophosphate dehydrogenase YP_001709306.1 565973 D 31964 CDS YP_001709307.1 170780975 6156494 567193..567726 1 NC_010407.1 hypothetical protein 567726 6156494 CMS_0536 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709307.1 567193 D 31964 CDS YP_001709308.1 170780976 6156495 567730..569253 1 NC_010407.1 transport protein 569253 6156495 CMS_0537 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709308.1 567730 D 31964 CDS YP_001709309.1 170780977 6156496 569253..570242 1 NC_010407.1 Hydrophobicity profile typical of sortase-sorted surface proteins but no LPXTG motif or similar.; hypothetical protein 570242 6156496 CMS_0538 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709309.1 569253 D 31964 CDS YP_001709310.1 170780978 6156497 570252..570794 1 NC_010407.1 hypothetical protein 570794 6156497 CMS_0539 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709310.1 570252 D 31964 CDS YP_001709311.1 170780979 6156498 570791..572371 1 NC_010407.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 572371 guaA 6156498 guaA Clavibacter michiganensis subsp. sepedonicus GMP synthase YP_001709311.1 570791 D 31964 CDS YP_001709312.1 170780980 6156500 573417..574475 1 NC_010407.1 glycerophosphoryl diester phosphodiesterase 574475 6156500 CMS_0542 Clavibacter michiganensis subsp. sepedonicus glycerophosphoryl diester phosphodiesterase YP_001709312.1 573417 D 31964 CDS YP_001709313.1 170780981 6156501 complement(574486..575448) 1 NC_010407.1 P/R; insertion element IS1121 transposase 575448 6156501 CMS_0543 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709313.1 574486 R 31964 CDS YP_001709314.1 170780982 6156503 576060..576278 1 NC_010407.1 hypothetical protein 576278 6156503 CMS_0544A Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709314.1 576060 D 31964 CDS YP_001709315.1 170780983 6156504 576289..577200 1 NC_010407.1 Matches (only) two proteins from secondary metabolism gene clusters.; hypothetical protein 577200 6156504 CMS_0545 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709315.1 576289 D 31964 CDS YP_001709316.1 170780984 6156505 577197..578459 1 NC_010407.1 hypothetical protein 578459 6156505 CMS_0546 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709316.1 577197 D 31964 CDS YP_001709317.1 170780985 6156506 578518..579486 1 NC_010407.1 hypothetical protein 579486 6156506 CMS_0547 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709317.1 578518 D 31964 CDS YP_001709318.1 170780986 6156507 579479..580435 1 NC_010407.1 ABC transporter ATP-binding protein 580435 6156507 CMS_0548 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001709318.1 579479 D 31964 CDS YP_001709319.1 170780987 6156509 581325..582389 1 NC_010407.1 hypothetical protein 582389 6156509 CMS_0550 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709319.1 581325 D 31964 CDS YP_001709320.1 170780988 6156511 583388..584521 1 NC_010407.1 hypothetical protein 584521 6156511 CMS_0552 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709320.1 583388 D 31964 CDS YP_001709321.1 170780989 6156512 584604..585413 1 NC_010407.1 two component response regulator 585413 6156512 CMS_0553 Clavibacter michiganensis subsp. sepedonicus two component response regulator YP_001709321.1 584604 D 31964 CDS YP_001709322.1 170780990 6156513 585515..587098 1 NC_010407.1 two component sensor kinase 587098 6156513 CMS_0554 Clavibacter michiganensis subsp. sepedonicus two component sensor kinase YP_001709322.1 585515 D 31964 CDS YP_001709323.1 170780991 6156514 587100..587366 1 NC_010407.1 hypothetical protein 587366 6156514 CMS_0555 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709323.1 587100 D 31964 CDS YP_001709324.1 170780992 6156515 587418..587960 1 NC_010407.1 catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis; N-acetylglutamate synthase 587960 6156515 CMS_0556 Clavibacter michiganensis subsp. sepedonicus N-acetylglutamate synthase YP_001709324.1 587418 D 31964 CDS YP_001709325.1 170780993 6156516 588063..588728 1 NC_010407.1 hypothetical protein 588728 6156516 CMS_0557 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709325.1 588063 D 31964 CDS YP_001709326.1 170780994 6156517 588846..589004 1 NC_010407.1 hypothetical protein 589004 6156517 CMS_0558 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709326.1 588846 D 31964 CDS YP_001709327.1 170780995 6156518 589117..589431 1 NC_010407.1 ArsR family transcriptional regulator 589431 6156518 CMS_0559 Clavibacter michiganensis subsp. sepedonicus ArsR family transcriptional regulator YP_001709327.1 589117 D 31964 CDS YP_001709328.1 170780996 6156519 complement(589491..590882) 1 NC_010407.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 590882 6156519 CMS_0560 Clavibacter michiganensis subsp. sepedonicus DNA repair protein RadA YP_001709328.1 589491 R 31964 CDS YP_001709329.1 170780997 6156520 complement(590934..591896) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 591896 6156520 CMS_0561 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709329.1 590934 R 31964 CDS YP_001709330.1 170780998 6156521 592001..592321 1 NC_010407.1 DNA-binding protein 592321 6156521 CMS_0562 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001709330.1 592001 D 31964 CDS YP_001709331.1 170780999 6156522 592387..592893 1 NC_010407.1 hypothetical protein 592893 6156522 CMS_0563 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709331.1 592387 D 31964 CDS YP_001709332.1 170781000 6156524 594102..594881 1 NC_010407.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 594881 6156524 CMS_0565 Clavibacter michiganensis subsp. sepedonicus phosphate transporter ATP-binding protein YP_001709332.1 594102 D 31964 CDS YP_001709333.1 170781001 6156525 complement(594961..595800) 1 NC_010407.1 hypothetical protein 595800 6156525 CMS_0566 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709333.1 594961 R 31964 CDS YP_001709334.1 170781002 6156526 complement(595821..596423) 1 NC_010407.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in M. bovis this protein has been shown to be involved in expression of antigenic proteins; RNA polymerase sigma factor SigK 596423 6156526 CMS_0567 Clavibacter michiganensis subsp. sepedonicus RNA polymerase sigma factor SigK YP_001709334.1 595821 R 31964 CDS YP_001709335.1 170781003 6156527 complement(596988..597620) 1 NC_010407.1 hypothetical protein 597620 6156527 CMS_0568 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709335.1 596988 R 31964 CDS YP_001709336.1 170781004 6159050 complement(597764..598843) 1 NC_010407.1 hypothetical protein 598843 6159050 CMS_0569 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709336.1 597764 R 31964 CDS YP_001709337.1 170781005 6156529 599108..599887 1 NC_010407.1 hypothetical protein 599887 6156529 CMS_0570 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709337.1 599108 D 31964 CDS YP_001709338.1 170781006 6156530 complement(599929..601416) 1 NC_010407.1 hypothetical protein 601416 6156530 CMS_0571 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709338.1 599929 R 31964 CDS YP_001709339.1 170781007 6156531 complement(601680..602519) 1 NC_010407.1 Contains Pfam match to PF01551;Peptidase; hypothetical protein 602519 6156531 CMS_0572 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709339.1 601680 R 31964 CDS YP_001709340.1 170781008 6156532 602692..602949 1 NC_010407.1 hypothetical protein 602949 6156532 CMS_0573 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709340.1 602692 D 31964 CDS YP_001709341.1 170781009 6156533 complement(603028..603198) 1 NC_010407.1 hypothetical protein 603198 6156533 CMS_0574 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709341.1 603028 R 31964 CDS YP_001709342.1 170781010 6156534 complement(603195..603992) 1 NC_010407.1 hypothetical protein 603992 6156534 CMS_0575 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709342.1 603195 R 31964 CDS YP_001709343.1 170781011 6156535 604171..604422 1 NC_010407.1 hypothetical protein 604422 6156535 CMS_0576 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709343.1 604171 D 31964 CDS YP_001709344.1 170781012 6156536 complement(604503..605558) 1 NC_010407.1 calcium-binding exported protein 605558 6156536 CMS_0577 Clavibacter michiganensis subsp. sepedonicus calcium-binding exported protein YP_001709344.1 604503 R 31964 CDS YP_001709345.1 170781013 6156537 complement(605638..606600) 1 NC_010407.1 Nu/C; insertion element IS1121 transposase 606600 6156537 CMS_0578 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709345.1 605638 R 31964 CDS YP_001709346.1 170781014 6156538 complement(606698..607618) 1 NC_010407.1 epimerase 607618 6156538 CMS_0579 Clavibacter michiganensis subsp. sepedonicus epimerase YP_001709346.1 606698 R 31964 CDS YP_001709347.1 170781015 6156539 complement(607629..608459) 1 NC_010407.1 DeoR family transcriptional regulator 608459 6156539 CMS_0580 Clavibacter michiganensis subsp. sepedonicus DeoR family transcriptional regulator YP_001709347.1 607629 R 31964 CDS YP_001709348.1 170781016 6156540 608553..609695 1 NC_010407.1 galactose-1-phosphate uridylyltransferase 609695 6156540 CMS_0581 Clavibacter michiganensis subsp. sepedonicus galactose-1-phosphate uridylyltransferase YP_001709348.1 608553 D 31964 CDS YP_001709349.1 170781017 6156541 609692..610852 1 NC_010407.1 galactokinase 610852 6156541 CMS_0582 Clavibacter michiganensis subsp. sepedonicus galactokinase YP_001709349.1 609692 D 31964 CDS YP_001709350.1 170781018 6156542 610873..611814 1 NC_010407.1 hypothetical protein 611814 6156542 CMS_0583 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709350.1 610873 D 31964 CDS YP_001709351.1 170781019 6156543 611811..612410 1 NC_010407.1 siderophore binding protein 612410 6156543 CMS_0584 Clavibacter michiganensis subsp. sepedonicus siderophore binding protein YP_001709351.1 611811 D 31964 CDS YP_001709352.1 170781020 6156544 complement(612474..613376) 1 NC_010407.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 613376 6156544 CMS_0585 Clavibacter michiganensis subsp. sepedonicus bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001709352.1 612474 R 31964 CDS YP_001709353.1 170781021 6156545 complement(613373..614707) 1 NC_010407.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 614707 glyA 6156545 glyA Clavibacter michiganensis subsp. sepedonicus serine hydroxymethyltransferase YP_001709353.1 613373 R 31964 CDS YP_001709354.1 170781022 6156546 615097..616584 1 NC_010407.1 amylosucrase 616584 6156546 CMS_0587 Clavibacter michiganensis subsp. sepedonicus amylosucrase YP_001709354.1 615097 D 31964 CDS YP_001709355.1 170781023 6156547 616625..617128 1 NC_010407.1 hypothetical protein 617128 6156547 CMS_0588 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709355.1 616625 D 31964 CDS YP_001709356.1 170781024 6156548 complement(617154..618011) 1 NC_010407.1 LysR family transcriptional regulator 618011 6156548 CMS_0589 Clavibacter michiganensis subsp. sepedonicus LysR family transcriptional regulator YP_001709356.1 617154 R 31964 CDS YP_001709357.1 170781025 6156549 618168..619634 1 NC_010407.1 GC Frameplot suggests that an earlier stop codon has been lost.; transport protein 619634 6156549 CMS_0590 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709357.1 618168 D 31964 CDS YP_001709358.1 170781026 6156550 complement(619543..620574) 1 NC_010407.1 oxidoreductase 620574 6156550 CMS_0591 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709358.1 619543 R 31964 CDS YP_001709359.1 170781027 6156551 620703..621386 1 NC_010407.1 metal-dependent transcriptional regulator 621386 sirR 6156551 sirR Clavibacter michiganensis subsp. sepedonicus metal-dependent transcriptional regulator YP_001709359.1 620703 D 31964 CDS YP_001709360.1 170781028 6158991 complement(621424..622674) 1 NC_010407.1 manganese transport protein 622674 6158991 CMS_0593 Clavibacter michiganensis subsp. sepedonicus manganese transport protein YP_001709360.1 621424 R 31964 CDS YP_001709361.1 170781029 6156552 complement(622887..623816) 1 NC_010407.1 hypothetical protein 623816 6156552 CMS_0594 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709361.1 622887 R 31964 CDS YP_001709362.1 170781030 6156553 complement(623960..625273) 1 NC_010407.1 transport protein 625273 6156553 CMS_0595 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709362.1 623960 R 31964 CDS YP_001709363.1 170781031 6156554 625426..626223 1 NC_010407.1 formyltetrahydrofolate deformylase 626223 6156554 CMS_0596 Clavibacter michiganensis subsp. sepedonicus formyltetrahydrofolate deformylase YP_001709363.1 625426 D 31964 CDS YP_001709364.1 170781032 6156555 complement(626326..629943) 1 NC_010407.1 Tandem duplication indicated by similarity to upstream CDS.; peptidase 629943 6156555 CMS_0597 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001709364.1 626326 R 31964 CDS YP_001709365.1 170781033 6156556 complement(630254..633853) 1 NC_010407.1 Tandem duplication indicated by similarity to downstream CDS.; peptidase 633853 6156556 CMS_0598 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001709365.1 630254 R 31964 CDS YP_001709366.1 170781034 6156557 complement(634099..635313) 1 NC_010407.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 635313 6156557 CMS_0599 Clavibacter michiganensis subsp. sepedonicus isocitrate dehydrogenase YP_001709366.1 634099 R 31964 CDS YP_001709367.1 170781035 6156558 635537..635989 1 NC_010407.1 acetyltransferase 635989 6156558 CMS_0600 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001709367.1 635537 D 31964 CDS YP_001709368.1 170781036 6156559 complement(636000..636962) 1 NC_010407.1 N/R; insertion element IS1121 transposase 636962 6156559 CMS_0601 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709368.1 636000 R 31964 CDS YP_001709369.1 170781037 6156560 637131..637580 1 NC_010407.1 phosphotransferase enzyme IIA component 637580 6156560 CMS_0602 Clavibacter michiganensis subsp. sepedonicus phosphotransferase enzyme IIA component YP_001709369.1 637131 D 31964 CDS YP_001709370.1 170781038 6156561 637577..637849 1 NC_010407.1 phosphotransferase IIB component 637849 6156561 CMS_0603 Clavibacter michiganensis subsp. sepedonicus phosphotransferase IIB component YP_001709370.1 637577 D 31964 CDS YP_001709371.1 170781039 6156562 complement(637798..638841) 1 NC_010407.1 hypothetical protein 638841 6156562 CMS_0604 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709371.1 637798 R 31964 CDS YP_001709372.1 170781040 6156563 complement(638838..639494) 1 NC_010407.1 MerR family transcriptional regulator 639494 6156563 CMS_0605 Clavibacter michiganensis subsp. sepedonicus MerR family transcriptional regulator YP_001709372.1 638838 R 31964 CDS YP_001709373.1 170781041 6156564 complement(639565..641268) 1 NC_010407.1 phosphomannomutase 641268 6156564 CMS_0606 Clavibacter michiganensis subsp. sepedonicus phosphomannomutase YP_001709373.1 639565 R 31964 CDS YP_001709374.1 170781042 6156565 complement(641265..642092) 1 NC_010407.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 642092 punA 6156565 punA Clavibacter michiganensis subsp. sepedonicus purine nucleoside phosphorylase YP_001709374.1 641265 R 31964 CDS YP_001709375.1 170781043 6158894 642177..643625 1 NC_010407.1 catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity; flavoprotein disulfide reductase 643625 6158894 CMS_0608 Clavibacter michiganensis subsp. sepedonicus flavoprotein disulfide reductase YP_001709375.1 642177 D 31964 CDS YP_001709376.1 170781044 6156566 complement(643706..645475) 1 NC_010407.1 biotin carboxylase 645475 accC 6156566 accC Clavibacter michiganensis subsp. sepedonicus biotin carboxylase YP_001709376.1 643706 R 31964 CDS YP_001709377.1 170781045 6158586 645598..646125 1 NC_010407.1 hypothetical protein 646125 6158586 CMS_0610 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709377.1 645598 D 31964 CDS YP_001709378.1 170781046 6156567 complement(646136..646807) 1 NC_010407.1 hypothetical protein 646807 6156567 CMS_0611 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709378.1 646136 R 31964 CDS YP_001709379.1 170781047 6156568 646814..648139 1 NC_010407.1 RNA methyltransferase 648139 6156568 CMS_0612 Clavibacter michiganensis subsp. sepedonicus RNA methyltransferase YP_001709379.1 646814 D 31964 CDS YP_001709380.1 170781048 6156569 648184..648942 1 NC_010407.1 two-component response regulator 648942 6156569 CMS_0613 Clavibacter michiganensis subsp. sepedonicus two-component response regulator YP_001709380.1 648184 D 31964 CDS YP_001709381.1 170781049 6156572 complement(648953..649915) 1 NC_010407.1 P; insertion element IS1121 transposase 649915 6156572 CMS_0614 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709381.1 648953 R 31964 CDS YP_001709382.1 170781050 6156571 651349..652371 1 NC_010407.1 hypothetical protein 652371 6156571 CMS_0616 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709382.1 651349 D 31964 CDS YP_001709383.1 170781051 6156573 complement(652664..652897) 1 NC_010407.1 hypothetical protein 652897 6156573 CMS_0617 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709383.1 652664 R 31964 CDS YP_001709384.1 170781052 6156574 complement(652894..654507) 1 NC_010407.1 propionyl-CoA carboxylase subunit beta 654507 6156574 CMS_0618 Clavibacter michiganensis subsp. sepedonicus propionyl-CoA carboxylase subunit beta YP_001709384.1 652894 R 31964 CDS YP_001709385.1 170781053 6156575 654582..655397 1 NC_010407.1 ligase; BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-coa-carboxylase] synthetase (biotin--protein ligase) 655397 birA 6156575 birA Clavibacter michiganensis subsp. sepedonicus BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-coa-carboxylase] synthetase (biotin--protein ligase) YP_001709385.1 654582 D 31964 CDS YP_001709386.1 170781054 6158627 655401..656195 1 NC_010407.1 hypothetical protein 656195 6158627 CMS_0620 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709386.1 655401 D 31964 CDS YP_001709387.1 170781055 6156576 complement(656245..656736) 1 NC_010407.1 hypothetical protein 656736 6156576 CMS_0621 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709387.1 656245 R 31964 CDS YP_001709388.1 170781056 6156577 656806..658023 1 NC_010407.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 658023 6156577 CMS_0622 Clavibacter michiganensis subsp. sepedonicus phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001709388.1 656806 D 31964 CDS YP_001709389.1 170781057 6156578 658114..658674 1 NC_010407.1 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE 658674 6156578 CMS_0623 Clavibacter michiganensis subsp. sepedonicus phosphoribosylaminoimidazole carboxylase catalytic subunit PurE YP_001709389.1 658114 D 31964 CDS YP_001709390.1 170781058 6156579 658749..660020 1 NC_010407.1 LytR family transcriptional regulator 660020 6156579 CMS_0624 Clavibacter michiganensis subsp. sepedonicus LytR family transcriptional regulator YP_001709390.1 658749 D 31964 CDS YP_001709391.1 170781059 6156580 complement(660037..661176) 1 NC_010407.1 glycosyl transferase 661176 6156580 CMS_0625 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709391.1 660037 R 31964 CDS YP_001709392.1 170781060 6156581 complement(661268..661972) 1 NC_010407.1 polysaccharide ABC transport ATP-binding protein 661972 6156581 CMS_0626 Clavibacter michiganensis subsp. sepedonicus polysaccharide ABC transport ATP-binding protein YP_001709392.1 661268 R 31964 CDS YP_001709393.1 170781061 6156582 complement(661998..662867) 1 NC_010407.1 polysaccharide ABC transport integral membrane protein 662867 6156582 CMS_0627 Clavibacter michiganensis subsp. sepedonicus polysaccharide ABC transport integral membrane protein YP_001709393.1 661998 R 31964 CDS YP_001709394.1 170781062 6156583 complement(662963..663817) 1 NC_010407.1 dTDP-sugar reductase 663817 6156583 CMS_0628 Clavibacter michiganensis subsp. sepedonicus dTDP-sugar reductase YP_001709394.1 662963 R 31964 CDS YP_001709395.1 170781063 6156584 complement(663814..664803) 1 NC_010407.1 sugar dehydratase 664803 6156584 CMS_0629 Clavibacter michiganensis subsp. sepedonicus sugar dehydratase YP_001709395.1 663814 R 31964 CDS YP_001709396.1 170781064 6156585 664981..665433 1 NC_010407.1 hypothetical protein 665433 6156585 CMS_0630 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709396.1 664981 D 31964 CDS YP_001709397.1 170781065 6156586 665459..666064 1 NC_010407.1 dTDP-sugar epimerase 666064 6156586 CMS_0631 Clavibacter michiganensis subsp. sepedonicus dTDP-sugar epimerase YP_001709397.1 665459 D 31964 CDS YP_001709398.1 170781066 6156587 666068..666931 1 NC_010407.1 nucleotidyl transferase 666931 6156587 CMS_0632 Clavibacter michiganensis subsp. sepedonicus nucleotidyl transferase YP_001709398.1 666068 D 31964 CDS YP_001709399.1 170781067 6156588 complement(666977..667828) 1 NC_010407.1 glycosyl transferase 667828 6156588 CMS_0633 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709399.1 666977 R 31964 CDS YP_001709400.1 170781068 6156589 668103..670340 1 NC_010407.1 hypothetical protein 670340 6156589 CMS_0634 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709400.1 668103 D 31964 CDS YP_001709401.1 170781069 6156590 670337..671299 1 NC_010407.1 glycosyl transferase 671299 TTHA0885 6156590 TTHA0885 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709401.1 670337 D 31964 CDS YP_001709402.1 170781070 6159082 complement(671342..672340) 1 NC_010407.1 glycosyl transferase 672340 6159082 CMS_0636 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709402.1 671342 R 31964 CDS YP_001709403.1 170781071 6156591 complement(672432..674162) 1 NC_010407.1 hypothetical protein 674162 6156591 CMS_0637 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709403.1 672432 R 31964 CDS YP_001709404.1 170781072 6156592 674456..675304 1 NC_010407.1 glycosyl transferase 675304 6156592 CMS_0638 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709404.1 674456 D 31964 CDS YP_001709405.1 170781073 6156593 675372..676535 1 NC_010407.1 UDP-galactopyranose mutase 676535 glf 6156593 glf Clavibacter michiganensis subsp. sepedonicus UDP-galactopyranose mutase YP_001709405.1 675372 D 31964 CDS YP_001709406.1 170781074 6158717 676535..678553 1 NC_010407.1 glycosyl transferase 678553 6158717 CMS_0640 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709406.1 676535 D 31964 CDS YP_001709407.1 170781075 6156594 678632..680527 1 NC_010407.1 hypothetical protein 680527 6156594 CMS_0641 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709407.1 678632 D 31964 CDS YP_001709408.1 170781076 6156595 680665..681135 1 NC_010407.1 hypothetical protein 681135 6156595 CMS_0642 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709408.1 680665 D 31964 CDS YP_001709409.1 170781077 6156596 complement(681172..682464) 1 NC_010407.1 Tandem duplication suggested by similarity to upstream CDS.; exopolysaccharide production protein 682464 6156596 CMS_0642A Clavibacter michiganensis subsp. sepedonicus exopolysaccharide production protein YP_001709409.1 681172 R 31964 CDS YP_001709410.1 170781078 6156597 complement(682513..683967) 1 NC_010407.1 Tandem duplication suggested by similarity to downstream CDS.; exopolysaccharide production protein 683967 6156597 CMS_0642B Clavibacter michiganensis subsp. sepedonicus exopolysaccharide production protein YP_001709410.1 682513 R 31964 CDS YP_001709411.1 170781079 6156598 complement(684061..685239) 1 NC_010407.1 acyl-CoA dehydrogenase 685239 6156598 CMS_0642C Clavibacter michiganensis subsp. sepedonicus acyl-CoA dehydrogenase YP_001709411.1 684061 R 31964 CDS YP_001709412.1 170781080 6156599 685405..686712 1 NC_010407.1 mannose-6-phosphate isomerase 686712 manA 6156599 manA Clavibacter michiganensis subsp. sepedonicus mannose-6-phosphate isomerase YP_001709412.1 685405 D 31964 CDS YP_001709413.1 170781081 6158800 686747..687715 1 NC_010407.1 UDP-glucose 4-epimerase 687715 6158800 CMS_0644 Clavibacter michiganensis subsp. sepedonicus UDP-glucose 4-epimerase YP_001709413.1 686747 D 31964 CDS YP_001709414.1 170781082 6156600 complement(687726..688688) 1 NC_010407.1 Nu; insertion element IS1121 transposase 688688 6156600 CMS_0645 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709414.1 687726 R 31964 CDS YP_001709415.1 170781083 6156601 688939..689256 1 NC_010407.1 WhiB family transcriptional regulator 689256 6156601 CMS_0646 Clavibacter michiganensis subsp. sepedonicus WhiB family transcriptional regulator YP_001709415.1 688939 D 31964 CDS YP_001709416.1 170781084 6156602 689350..692439 1 NC_010407.1 glycosyl transferase 692439 6156602 CMS_0647 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709416.1 689350 D 31964 CDS YP_001709417.1 170781085 6156603 692426..693943 1 NC_010407.1 hypothetical protein 693943 6156603 CMS_0648 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709417.1 692426 D 31964 CDS YP_001709418.1 170781086 6156604 complement(694056..694499) 1 NC_010407.1 hypothetical protein 694499 6156604 CMS_0649 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709418.1 694056 R 31964 CDS YP_001709419.1 170781087 6156605 694545..694766 1 NC_010407.1 hypothetical protein 694766 6156605 CMS_0650 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709419.1 694545 D 31964 CDS YP_001709420.1 170781088 6156606 694799..696190 1 NC_010407.1 converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; phosphomannomutase 696190 manB 6156606 manB Clavibacter michiganensis subsp. sepedonicus phosphomannomutase YP_001709420.1 694799 D 31964 CDS YP_001709421.1 170781089 6158801 696324..696614 1 NC_010407.1 hypothetical protein 696614 6158801 CMS_0652 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709421.1 696324 D 31964 CDS YP_001709422.1 170781090 6156607 696659..696874 1 NC_010407.1 heavy metal binding protein 696874 6156607 CMS_0653 Clavibacter michiganensis subsp. sepedonicus heavy metal binding protein YP_001709422.1 696659 D 31964 CDS YP_001709423.1 170781091 6156608 696876..699344 1 NC_010407.1 metal transporter ATPase 699344 6156608 CMS_0654 Clavibacter michiganensis subsp. sepedonicus metal transporter ATPase YP_001709423.1 696876 D 31964 CDS YP_001709424.1 170781092 6156609 699407..700891 1 NC_010407.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 700891 6156609 CMS_0655 Clavibacter michiganensis subsp. sepedonicus S-adenosyl-L-homocysteine hydrolase YP_001709424.1 699407 D 31964 CDS YP_001709425.1 170781093 6156610 complement(700985..701854) 1 NC_010407.1 hypothetical protein 701854 6156610 CMS_0656 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709425.1 700985 R 31964 CDS YP_001709426.1 170781094 6156612 complement(702920..705478) 1 NC_010407.1 beta-glucosidase 705478 6156612 CMS_0659 Clavibacter michiganensis subsp. sepedonicus beta-glucosidase YP_001709426.1 702920 R 31964 CDS YP_001709427.1 170781095 6156613 complement(705475..706809) 1 NC_010407.1 sugar transporter 706809 6156613 CMS_0660 Clavibacter michiganensis subsp. sepedonicus sugar transporter YP_001709427.1 705475 R 31964 CDS YP_001709428.1 170781096 6156614 706866..707501 1 NC_010407.1 TetR family transcriptional regulator 707501 6156614 CMS_0661 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709428.1 706866 D 31964 CDS YP_001709429.1 170781097 6156615 complement(707562..708869) 1 NC_010407.1 hypothetical protein 708869 6156615 CMS_0662 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709429.1 707562 R 31964 CDS YP_001709430.1 170781098 6156617 complement(709959..710912) 1 NC_010407.1 regulatory protein 710912 6156617 CMS_0664 Clavibacter michiganensis subsp. sepedonicus regulatory protein YP_001709430.1 709959 R 31964 CDS YP_001709431.1 170781099 6156618 complement(710909..712165) 1 NC_010407.1 hypothetical protein 712165 6156618 CMS_0665 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709431.1 710909 R 31964 CDS YP_001709432.1 170781100 6156619 complement(712162..712848) 1 NC_010407.1 hypothetical protein 712848 6156619 CMS_0666 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709432.1 712162 R 31964 CDS YP_001709433.1 170781101 6156620 complement(712845..714128) 1 NC_010407.1 hypothetical protein 714128 6156620 CMS_0667 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709433.1 712845 R 31964 CDS YP_001709434.1 170781102 6156621 714242..714922 1 NC_010407.1 two-component system response regulator 714922 6156621 CMS_0668 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001709434.1 714242 D 31964 CDS YP_001709435.1 170781103 6156622 714942..716561 1 NC_010407.1 two-component sensor kinase 716561 6156622 CMS_0669 Clavibacter michiganensis subsp. sepedonicus two-component sensor kinase YP_001709435.1 714942 D 31964 CDS YP_001709436.1 170781104 6156623 716680..718278 1 NC_010407.1 lipoprotein LpqB 718278 6156623 CMS_0670 Clavibacter michiganensis subsp. sepedonicus lipoprotein LpqB YP_001709436.1 716680 D 31964 CDS YP_001709437.1 170781105 6156624 718340..719164 1 NC_010407.1 hypothetical protein 719164 6156624 CMS_0671 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709437.1 718340 D 31964 CDS YP_001709438.1 170781106 6156625 719301..720008 1 NC_010407.1 hypothetical protein 720008 6156625 CMS_0672 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709438.1 719301 D 31964 CDS YP_001709439.1 170781107 6156626 720208..723030 1 NC_010407.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 723030 secA 6156626 secA Clavibacter michiganensis subsp. sepedonicus preprotein translocase subunit SecA YP_001709439.1 720208 D 31964 CDS YP_001709440.1 170781108 6158981 complement(723144..723731) 1 NC_010407.1 hypothetical protein 723731 6158981 CMS_0674 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709440.1 723144 R 31964 CDS YP_001709441.1 170781109 6156627 723938..724543 1 NC_010407.1 hypothetical protein 724543 6156627 CMS_0675 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709441.1 723938 D 31964 CDS YP_001709442.1 170781110 6156628 724613..725251 1 NC_010407.1 hypothetical protein 725251 6156628 CMS_0676 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709442.1 724613 D 31964 CDS YP_001709443.1 170781111 6156629 725287..726843 1 NC_010407.1 hypothetical protein 726843 6156629 CMS_0677 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709443.1 725287 D 31964 CDS YP_001709444.1 170781112 6156630 726853..728355 1 NC_010407.1 histidine kinase 728355 6156630 CMS_0678 Clavibacter michiganensis subsp. sepedonicus histidine kinase YP_001709444.1 726853 D 31964 CDS YP_001709445.1 170781113 6156631 complement(728453..728701) 1 NC_010407.1 WhiB family transcriptional regulator 728701 6156631 CMS_0679 Clavibacter michiganensis subsp. sepedonicus WhiB family transcriptional regulator YP_001709445.1 728453 R 31964 CDS YP_001709446.1 170781114 6156632 729013..729378 1 NC_010407.1 hypothetical protein 729378 6156632 CMS_0681 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709446.1 729013 D 31964 CDS YP_001709447.1 170781115 6156633 complement(729402..729881) 1 NC_010407.1 peroxidase 729881 6156633 CMS_0682 Clavibacter michiganensis subsp. sepedonicus peroxidase YP_001709447.1 729402 R 31964 CDS YP_001709448.1 170781116 6159051 730390..730884 1 NC_010407.1 Contains an N-terminal domain in common with CarD from Myxococcus xanthus Q50887 but does not include the C-terminal DNA-binding domain so is unlikely to carry out the equivalent regulation role.; hypothetical protein 730884 6159051 CMS_0684 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709448.1 730390 D 31964 CDS YP_001709449.1 170781117 6156635 731009..731239 1 NC_010407.1 hypothetical protein 731239 6156635 CMS_0685 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709449.1 731009 D 31964 CDS YP_001709450.1 170781118 6156636 731455..732222 1 NC_010407.1 hypothetical protein 732222 6156636 CMS_0686 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709450.1 731455 D 31964 CDS YP_001709451.1 170781119 6156637 732376..732711 1 NC_010407.1 hypothetical protein 732711 6156637 CMS_0687 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709451.1 732376 D 31964 CDS YP_001709452.1 170781120 6156638 complement(732722..734203) 1 NC_010407.1 L-asparagine permease 734203 6156638 CMS_0688 Clavibacter michiganensis subsp. sepedonicus L-asparagine permease YP_001709452.1 732722 R 31964 CDS YP_001709453.1 170781121 6156639 734351..734917 1 NC_010407.1 lipoprotein 734917 6156639 CMS_0689 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001709453.1 734351 D 31964 CDS YP_001709454.1 170781122 6156640 complement(734945..736273) 1 NC_010407.1 transport protein 736273 6156640 CMS_0690 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709454.1 734945 R 31964 CDS YP_001709455.1 170781123 6156641 complement(736270..736692) 1 NC_010407.1 MarR-family protein 736692 6156641 CMS_0691 Clavibacter michiganensis subsp. sepedonicus MarR-family protein YP_001709455.1 736270 R 31964 CDS YP_001709456.1 170781124 6156642 736879..737100 1 NC_010407.1 hypothetical protein 737100 6156642 CMS_0692 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709456.1 736879 D 31964 CDS YP_001709457.1 170781125 6156643 737157..738119 1 NC_010407.1 N/R; insertion element ISCmi2 transposase 738119 6156643 CMS_0693 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709457.1 737157 D 31964 CDS YP_001709458.1 170781126 6156644 complement(738932..739867) 1 NC_010407.1 macrolide-resistance protein 739867 6156644 CMS_0694 Clavibacter michiganensis subsp. sepedonicus macrolide-resistance protein YP_001709458.1 738932 R 31964 CDS YP_001709459.1 170781127 6156645 complement(739985..741613) 1 NC_010407.1 ubiquinol-cytochrome c reductase cytochrome b subunit 741613 qcrB 6156645 qcrB Clavibacter michiganensis subsp. sepedonicus ubiquinol-cytochrome c reductase cytochrome b subunit YP_001709459.1 739985 R 31964 CDS YP_001709460.1 170781128 6158916 complement(741597..742706) 1 NC_010407.1 ubiquinol-cytochrome C reductase iron-sulfur subunit 742706 qcrA 6158916 qcrA Clavibacter michiganensis subsp. sepedonicus ubiquinol-cytochrome C reductase iron-sulfur subunit YP_001709460.1 741597 R 31964 CDS YP_001709461.1 170781129 6158915 complement(742752..743552) 1 NC_010407.1 ubiquinol-cytochrome c reductase cytochrome c subunit 743552 qcrC 6158915 qcrC Clavibacter michiganensis subsp. sepedonicus ubiquinol-cytochrome c reductase cytochrome c subunit YP_001709461.1 742752 R 31964 CDS YP_001709462.1 170781130 6158917 complement(743579..744217) 1 NC_010407.1 cytochrome c oxidase polypeptide III 744217 ctaE 6158917 ctaE Clavibacter michiganensis subsp. sepedonicus cytochrome c oxidase polypeptide III YP_001709462.1 743579 R 31964 CDS YP_001709463.1 170781131 6158645 744297..745352 1 NC_010407.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 745352 trpD 6158645 trpD Clavibacter michiganensis subsp. sepedonicus anthranilate phosphoribosyltransferase YP_001709463.1 744297 D 31964 CDS YP_001709464.1 170781132 6159074 745400..746146 1 NC_010407.1 hypothetical protein 746146 6159074 CMS_0700 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709464.1 745400 D 31964 CDS YP_001709465.1 170781133 6156647 complement(747782..748588) 1 NC_010407.1 glycerol uptake facilitator protein 748588 6156647 CMS_0702 Clavibacter michiganensis subsp. sepedonicus glycerol uptake facilitator protein YP_001709465.1 747782 R 31964 CDS YP_001709466.1 170781134 6156648 748816..749817 1 NC_010407.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 749817 6156648 CMS_0703 Clavibacter michiganensis subsp. sepedonicus dihydroxyacetone kinase subunit DhaK YP_001709466.1 748816 D 31964 CDS YP_001709467.1 170781135 6156649 749821..750474 1 NC_010407.1 dihydroxyacetone kinase subunit 750474 dak2 6156649 dak2 Clavibacter michiganensis subsp. sepedonicus dihydroxyacetone kinase subunit YP_001709467.1 749821 D 31964 CDS YP_001709468.1 170781136 6158653 750471..751205 1 NC_010407.1 PTS system enzyme 751205 6158653 CMS_0705 Clavibacter michiganensis subsp. sepedonicus PTS system enzyme YP_001709468.1 750471 D 31964 CDS YP_001709469.1 170781137 6156650 complement(751231..751647) 1 NC_010407.1 hypothetical protein 751647 6156650 CMS_0706 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709469.1 751231 R 31964 CDS YP_001709470.1 170781138 6156651 751740..752255 1 NC_010407.1 hypothetical protein 752255 6156651 CMS_0707 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709470.1 751740 D 31964 CDS YP_001709471.1 170781139 6156652 complement(752301..752792) 1 NC_010407.1 glutathione peroxidase 752792 6156652 CMS_0708 Clavibacter michiganensis subsp. sepedonicus glutathione peroxidase YP_001709471.1 752301 R 31964 CDS YP_001709472.1 170781140 6156653 complement(752860..754620) 1 NC_010407.1 glycerol phosphate dehydrogenase 754620 6156653 CMS_0709 Clavibacter michiganensis subsp. sepedonicus glycerol phosphate dehydrogenase YP_001709472.1 752860 R 31964 CDS YP_001709473.1 170781141 6156654 754712..755689 1 NC_010407.1 DeoR family transcriptional regulator 755689 6156654 CMS_0710 Clavibacter michiganensis subsp. sepedonicus DeoR family transcriptional regulator YP_001709473.1 754712 D 31964 CDS YP_001709474.1 170781142 6159068 756547..758601 1 NC_010407.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 758601 thrS 6159068 thrS Clavibacter michiganensis subsp. sepedonicus threonyl-tRNA synthetase YP_001709474.1 756547 D 31964 CDS YP_001709475.1 170781143 6156656 758604..759188 1 NC_010407.1 hypothetical protein 759188 6156656 CMS_0712 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709475.1 758604 D 31964 CDS YP_001709476.1 170781144 6156657 759202..760104 1 NC_010407.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 760104 6156657 CMS_0713 Clavibacter michiganensis subsp. sepedonicus pyridoxal biosynthesis lyase PdxS YP_001709476.1 759202 D 31964 CDS YP_001709477.1 170781145 6156658 760094..760723 1 NC_010407.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 760723 6156658 CMS_0714 Clavibacter michiganensis subsp. sepedonicus glutamine amidotransferase subunit PdxT YP_001709477.1 760094 D 31964 CDS YP_001709478.1 170781146 6156659 760800..761567 1 NC_010407.1 hypothetical protein 761567 6156659 CMS_0715 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709478.1 760800 D 31964 CDS YP_001709479.1 170781147 6156660 761619..762233 1 NC_010407.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 762233 ruvC 6156660 ruvC Clavibacter michiganensis subsp. sepedonicus Holliday junction resolvase YP_001709479.1 761619 D 31964 CDS YP_001709480.1 170781148 6158975 762251..762895 1 NC_010407.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 762895 ruvA 6158975 ruvA Clavibacter michiganensis subsp. sepedonicus Holliday junction DNA helicase RuvA YP_001709480.1 762251 D 31964 CDS YP_001709481.1 170781149 6158973 762892..763971 1 NC_010407.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 763971 ruvB 6158973 ruvB Clavibacter michiganensis subsp. sepedonicus Holliday junction DNA helicase RuvB YP_001709481.1 762892 D 31964 CDS YP_001709482.1 170781150 6158974 764009..764431 1 NC_010407.1 preprotein translocase subunit 764431 6158974 CMS_0719 Clavibacter michiganensis subsp. sepedonicus preprotein translocase subunit YP_001709482.1 764009 D 31964 CDS YP_001709483.1 170781151 6156661 764558..766369 1 NC_010407.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 766369 secD 6156661 secD Clavibacter michiganensis subsp. sepedonicus preprotein translocase subunit SecD YP_001709483.1 764558 D 31964 CDS YP_001709484.1 170781152 6158982 766369..767379 1 NC_010407.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 767379 secF 6158982 secF Clavibacter michiganensis subsp. sepedonicus preprotein translocase subunit SecF YP_001709484.1 766369 D 31964 CDS YP_001709485.1 170781153 6158984 767376..767735 1 NC_010407.1 hypothetical protein 767735 6158984 CMS_0722 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709485.1 767376 D 31964 CDS YP_001709486.1 170781154 6156662 767866..770115 1 NC_010407.1 GTP pyrophosphokinase 770115 relA 6156662 relA Clavibacter michiganensis subsp. sepedonicus GTP pyrophosphokinase YP_001709486.1 767866 D 31964 CDS YP_001709487.1 170781155 6158928 complement(770094..770669) 1 NC_010407.1 hypothetical protein 770669 6158928 CMS_0724 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709487.1 770094 R 31964 CDS YP_001709488.1 170781156 6156663 complement(770763..771995) 1 NC_010407.1 hypothetical protein 771995 6156663 CMS_0725 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709488.1 770763 R 31964 CDS YP_001709489.1 170781157 6156664 772596..774056 1 NC_010407.1 recombination factor protein RarA 774056 6156664 CMS_0726 Clavibacter michiganensis subsp. sepedonicus recombination factor protein RarA YP_001709489.1 772596 D 31964 CDS YP_001709490.1 170781158 6156665 774305..774934 1 NC_010407.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 774934 rpsD 6156665 rpsD Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S4 YP_001709490.1 774305 D 31964 CDS YP_001709491.1 170781159 6156666 775108..775329 1 NC_010407.1 hypothetical protein 775329 6156666 CMS_0728 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709491.1 775108 D 31964 CDS YP_001709492.1 170781160 6156667 775335..777992 1 NC_010407.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 777992 alaS 6156667 alaS Clavibacter michiganensis subsp. sepedonicus alanyl-tRNA synthetase YP_001709492.1 775335 D 31964 CDS YP_001709493.1 170781161 6156668 777992..778477 1 NC_010407.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 778477 6156668 CMS_0730 Clavibacter michiganensis subsp. sepedonicus Holliday junction resolvase-like protein YP_001709493.1 777992 D 31964 CDS YP_001709494.1 170781162 6156669 778995..780005 1 NC_010407.1 hypothetical protein 780005 6156669 CMS_0731 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709494.1 778995 D 31964 CDS YP_001709495.1 170781163 6156670 779998..780888 1 NC_010407.1 shikimate 5-dehydrogenase 780888 6156670 CMS_0732 Clavibacter michiganensis subsp. sepedonicus shikimate 5-dehydrogenase YP_001709495.1 779998 D 31964 CDS YP_001709496.1 170781164 6156671 780892..782214 1 NC_010407.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 782214 6156671 CMS_0733 Clavibacter michiganensis subsp. sepedonicus chorismate synthase YP_001709496.1 780892 D 31964 CDS YP_001709497.1 170781165 6156672 782217..782708 1 NC_010407.1 shikimate kinase I 782708 6156672 CMS_0734 Clavibacter michiganensis subsp. sepedonicus shikimate kinase I YP_001709497.1 782217 D 31964 CDS YP_001709498.1 170781166 6156673 782705..783835 1 NC_010407.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 783835 aroB 6156673 aroB Clavibacter michiganensis subsp. sepedonicus 3-dehydroquinate synthase YP_001709498.1 782705 D 31964 CDS YP_001709499.1 170781167 6156674 783832..784620 1 NC_010407.1 short chain oxidoreductase 784620 6156674 CMS_0736 Clavibacter michiganensis subsp. sepedonicus short chain oxidoreductase YP_001709499.1 783832 D 31964 CDS YP_001709500.1 170781168 6156675 784728..785690 1 NC_010407.1 N/R; insertion element IS1121 transposase 785690 6156675 CMS_0737 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709500.1 784728 D 31964 CDS YP_001709501.1 170781169 6156676 complement(785701..786315) 1 NC_010407.1 hypothetical protein 786315 6156676 CMS_0738 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709501.1 785701 R 31964 CDS YP_001709502.1 170781170 6156677 786579..787553 1 NC_010407.1 ATPase 787553 6156677 CMS_0739 Clavibacter michiganensis subsp. sepedonicus ATPase YP_001709502.1 786579 D 31964 CDS YP_001709503.1 170781171 6156678 787558..788886 1 NC_010407.1 hypothetical protein 788886 6156678 CMS_0740 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709503.1 787558 D 31964 CDS YP_001709504.1 170781172 6156679 789082..791427 1 NC_010407.1 hypothetical protein 791427 6156679 CMS_0741 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709504.1 789082 D 31964 CDS YP_001709505.1 170781173 6156680 791424..793607 1 NC_010407.1 ATP-dependent DNA helicase RecG 793607 recG 6156680 recG Clavibacter michiganensis subsp. sepedonicus ATP-dependent DNA helicase RecG YP_001709505.1 791424 D 31964 CDS YP_001709506.1 170781174 6158922 793633..794124 1 NC_010407.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 794124 coaD 6158922 coaD Clavibacter michiganensis subsp. sepedonicus phosphopantetheine adenylyltransferase YP_001709506.1 793633 D 31964 CDS YP_001709507.1 170781175 6158640 794144..794716 1 NC_010407.1 hypothetical protein 794716 6158640 CMS_0744 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709507.1 794144 D 31964 CDS YP_001709508.1 170781176 6156681 794720..794923 1 NC_010407.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 794923 rpmF 6156681 rpmF Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L32 YP_001709508.1 794720 D 31964 CDS YP_001709509.1 170781177 6158958 794949..795665 1 NC_010407.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 795665 rnc 6158958 rnc Clavibacter michiganensis subsp. sepedonicus ribonuclease III YP_001709509.1 794949 D 31964 CDS YP_001709510.1 170781178 6156682 795672..796607 1 NC_010407.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 796607 6156682 CMS_0747 Clavibacter michiganensis subsp. sepedonicus formamidopyrimidine-DNA glycosylase YP_001709510.1 795672 D 31964 CDS YP_001709511.1 170781179 6156683 complement(796620..797738) 1 NC_010407.1 hypothetical protein 797738 6156683 CMS_0748 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709511.1 796620 R 31964 CDS YP_001709512.1 170781180 6156684 797891..801616 1 NC_010407.1 chromosome structure maintenance protein 801616 6156684 CMS_0749 Clavibacter michiganensis subsp. sepedonicus chromosome structure maintenance protein YP_001709512.1 797891 D 31964 CDS YP_001709513.1 170781181 6156685 801637..802512 1 NC_010407.1 signal recognition particle receptor 802512 ftsY 6156685 ftsY Clavibacter michiganensis subsp. sepedonicus signal recognition particle receptor YP_001709513.1 801637 D 31964 CDS YP_001709514.1 170781182 6158701 802561..804132 1 NC_010407.1 signal recognition particle protein 804132 ffh 6158701 ffh Clavibacter michiganensis subsp. sepedonicus signal recognition particle protein YP_001709514.1 802561 D 31964 CDS YP_001709515.1 170781183 6158688 804268..804648 1 NC_010407.1 dioxygenase 804648 6158688 CMS_0752 Clavibacter michiganensis subsp. sepedonicus dioxygenase YP_001709515.1 804268 D 31964 CDS YP_001709516.1 170781184 6156686 complement(804737..805909) 1 NC_010407.1 serine protease 805909 6156686 CMS_0753 Clavibacter michiganensis subsp. sepedonicus serine protease YP_001709516.1 804737 R 31964 CDS YP_001709517.1 170781185 6156687 complement(805950..807149) 1 NC_010407.1 glutamate--cysteine ligase 807149 6156687 CMS_0754 Clavibacter michiganensis subsp. sepedonicus glutamate--cysteine ligase YP_001709517.1 805950 R 31964 CDS YP_001709518.1 170781186 6156688 807357..807764 1 NC_010407.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 807764 rpsP 6156688 rpsP Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S16 YP_001709518.1 807357 D 31964 CDS YP_001709519.1 170781187 6158968 807768..808004 1 NC_010407.1 hypothetical protein 808004 6158968 CMS_0756 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709519.1 807768 D 31964 CDS YP_001709520.1 170781188 6156689 807982..808617 1 NC_010407.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 808617 rimM 6156689 rimM Clavibacter michiganensis subsp. sepedonicus 16S rRNA-processing protein RimM YP_001709520.1 807982 D 31964 CDS YP_001709521.1 170781189 6158936 808619..809305 1 NC_010407.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 809305 trmD 6158936 trmD Clavibacter michiganensis subsp. sepedonicus tRNA (guanine-N(1)-)-methyltransferase YP_001709521.1 808619 D 31964 CDS YP_001709522.1 170781190 6159024 complement(809340..810107) 1 NC_010407.1 methionine aminopeptidase 810107 map 6159024 map Clavibacter michiganensis subsp. sepedonicus methionine aminopeptidase YP_001709522.1 809340 R 31964 CDS YP_001709523.1 170781191 6158803 810179..810670 1 NC_010407.1 hypothetical protein 810670 6158803 CMS_0760 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709523.1 810179 D 31964 CDS YP_001709524.1 170781192 6156690 810841..811185 1 NC_010407.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 811185 rplS 6156690 rplS Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L19 YP_001709524.1 810841 D 31964 CDS YP_001709525.1 170781193 6158949 811252..812004 1 NC_010407.1 signal peptidase I 812004 sipU 6158949 sipU Clavibacter michiganensis subsp. sepedonicus signal peptidase I YP_001709525.1 811252 D 31964 CDS YP_001709526.1 170781194 6158990 812004..812663 1 NC_010407.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 812663 rnhB 6158990 rnhB Clavibacter michiganensis subsp. sepedonicus ribonuclease HII YP_001709526.1 812004 D 31964 CDS YP_001709527.1 170781195 6158941 812770..813093 1 NC_010407.1 hypothetical protein 813093 6158941 CMS_0764 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709527.1 812770 D 31964 CDS YP_001709528.1 170781196 6156691 813199..813561 1 NC_010407.1 hypothetical protein 813561 6156691 CMS_0765 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709528.1 813199 D 31964 CDS YP_001709529.1 170781197 6156692 813561..815117 1 NC_010407.1 DNA uptake protein 815117 6156692 CMS_0766 Clavibacter michiganensis subsp. sepedonicus DNA uptake protein YP_001709529.1 813561 D 31964 CDS YP_001709530.1 170781198 6156693 815114..816550 1 NC_010407.1 DNA-binding/uptake protein 816550 smf 6156693 smf Clavibacter michiganensis subsp. sepedonicus DNA-binding/uptake protein YP_001709530.1 815114 D 31964 CDS YP_001709531.1 170781199 6158992 816767..817714 1 NC_010407.1 tyrosine recombinase XerC 817714 xerC 6158992 xerC Clavibacter michiganensis subsp. sepedonicus tyrosine recombinase XerC YP_001709531.1 816767 D 31964 CDS YP_001709532.1 170781200 6159098 complement(817794..818357) 1 NC_010407.1 M23B family metallopeptidase 818357 6159098 CMS_0769 Clavibacter michiganensis subsp. sepedonicus M23B family metallopeptidase YP_001709532.1 817794 R 31964 CDS YP_001709533.1 170781201 6156694 818457..819926 1 NC_010407.1 sugar transporter 819926 6156694 CMS_0770 Clavibacter michiganensis subsp. sepedonicus sugar transporter YP_001709533.1 818457 D 31964 CDS YP_001709534.1 170781202 6156695 820165..821127 1 NC_010407.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 821127 rpsB 6156695 rpsB Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S2 YP_001709534.1 820165 D 31964 CDS YP_001709535.1 170781203 6158965 821238..822065 1 NC_010407.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 822065 tsf 6158965 tsf Clavibacter michiganensis subsp. sepedonicus elongation factor Ts YP_001709535.1 821238 D 31964 CDS YP_001709536.1 170781204 6159081 822225..822941 1 NC_010407.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 822941 pyrH 6159081 pyrH Clavibacter michiganensis subsp. sepedonicus uridylate kinase YP_001709536.1 822225 D 31964 CDS YP_001709537.1 170781205 6158913 823055..823612 1 NC_010407.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 823612 frr 6158913 frr Clavibacter michiganensis subsp. sepedonicus ribosome recycling factor YP_001709537.1 823055 D 31964 CDS YP_001709538.1 170781206 6158693 823736..824653 1 NC_010407.1 phosphatidate cytidylyltransferase 824653 cdsA 6158693 cdsA Clavibacter michiganensis subsp. sepedonicus phosphatidate cytidylyltransferase YP_001709538.1 823736 D 31964 CDS YP_001709539.1 170781207 6158630 824655..825209 1 NC_010407.1 hypothetical protein 825209 6158630 CMS_0776 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709539.1 824655 D 31964 CDS YP_001709540.1 170781208 6156696 825402..826028 1 NC_010407.1 hypothetical protein 826028 6156696 CMS_0777 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709540.1 825402 D 31964 CDS YP_001709541.1 170781209 6156697 826097..827827 1 NC_010407.1 Na+/H+ antiporter 827827 6156697 CMS_0778 Clavibacter michiganensis subsp. sepedonicus Na+/H+ antiporter YP_001709541.1 826097 D 31964 CDS YP_001709542.1 170781210 6156698 827863..828159 1 NC_010407.1 hypothetical protein 828159 6156698 CMS_0779 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709542.1 827863 D 31964 CDS YP_001709543.1 170781211 6156699 828156..828890 1 NC_010407.1 hypothetical protein 828890 6156699 CMS_0780 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709543.1 828156 D 31964 CDS YP_001709544.1 170781212 6156700 complement(828906..829964) 1 NC_010407.1 hypothetical protein 829964 6156700 CMS_0781 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709544.1 828906 R 31964 CDS YP_001709545.1 170781213 6156701 complement(829991..831766) 1 NC_010407.1 Contains extensive coiled-coil regions; low complexity hydrophilic protein 831766 6156701 CMS_0782 Clavibacter michiganensis subsp. sepedonicus low complexity hydrophilic protein YP_001709545.1 829991 R 31964 CDS YP_001709546.1 170781214 6156702 832052..833896 1 NC_010407.1 hypothetical protein 833896 6156702 CMS_0783 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709546.1 832052 D 31964 CDS YP_001709547.1 170781215 6156703 834076..834888 1 NC_010407.1 thioredoxin 834888 6156703 CMS_0784 Clavibacter michiganensis subsp. sepedonicus thioredoxin YP_001709547.1 834076 D 31964 CDS YP_001709548.1 170781216 6156704 complement(834964..837540) 1 NC_010407.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 837540 6156704 CMS_0785 Clavibacter michiganensis subsp. sepedonicus glycogen branching protein YP_001709548.1 834964 R 31964 CDS YP_001709549.1 170781217 6156705 complement(837537..840179) 1 NC_010407.1 May have later translational start site but not one which aligns with homologs.; alpha-amylase 840179 6156705 CMS_0786 Clavibacter michiganensis subsp. sepedonicus alpha-amylase YP_001709549.1 837537 R 31964 CDS YP_001709550.1 170781218 6156706 840288..841250 1 NC_010407.1 Nu/R/C; insertion element IS1121 transposase 841250 6156706 CMS_0787 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709550.1 840288 D 31964 CDS YP_001709551.1 170781219 6156707 complement(841388..842047) 1 NC_010407.1 hydrolase 842047 6156707 CMS_0789 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709551.1 841388 R 31964 CDS YP_001709552.1 170781220 6156708 842161..843345 1 NC_010407.1 glycosyl transferase 843345 6156708 CMS_0790 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709552.1 842161 D 31964 CDS YP_001709553.1 170781221 6156709 843440..843676 1 NC_010407.1 hypothetical protein 843676 6156709 CMS_0791 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709553.1 843440 D 31964 CDS YP_001709554.1 170781222 6156710 843669..843863 1 NC_010407.1 hypothetical protein 843863 6156710 CMS_0792 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709554.1 843669 D 31964 CDS YP_001709555.1 170781223 6156711 844096..845256 1 NC_010407.1 oxidase 845256 6156711 CMS_0793 Clavibacter michiganensis subsp. sepedonicus oxidase YP_001709555.1 844096 D 31964 CDS YP_001709556.1 170781224 6156712 complement(845269..845973) 1 NC_010407.1 hypothetical protein 845973 6156712 CMS_0794 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709556.1 845269 R 31964 CDS YP_001709557.1 170781225 6156713 complement(846081..847124) 1 NC_010407.1 esterase 847124 6156713 CMS_0795 Clavibacter michiganensis subsp. sepedonicus esterase YP_001709557.1 846081 R 31964 CDS YP_001709558.1 170781226 6156714 complement(847191..847910) 1 NC_010407.1 TetR family transcriptional regulator 847910 6156714 CMS_0796 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709558.1 847191 R 31964 CDS YP_001709559.1 170781227 6156715 complement(847907..849964) 1 NC_010407.1 hydrolase 849964 6156715 CMS_0797 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709559.1 847907 R 31964 CDS YP_001709560.1 170781228 6156716 complement(849961..851694) 1 NC_010407.1 nucleotide-binding ABC transporter subunit 851694 6156716 CMS_0798 Clavibacter michiganensis subsp. sepedonicus nucleotide-binding ABC transporter subunit YP_001709560.1 849961 R 31964 CDS YP_001709561.1 170781229 6156717 complement(851691..852572) 1 NC_010407.1 ABC transporter permease 852572 6156717 CMS_0798A Clavibacter michiganensis subsp. sepedonicus ABC transporter permease YP_001709561.1 851691 R 31964 CDS YP_001709562.1 170781230 6156718 complement(852569..853594) 1 NC_010407.1 oligopeptide ABC transporter integral membrane protein 853594 6156718 CMS_0799 Clavibacter michiganensis subsp. sepedonicus oligopeptide ABC transporter integral membrane protein YP_001709562.1 852569 R 31964 CDS YP_001709563.1 170781231 6156720 complement(855373..855840) 1 NC_010407.1 oxygenase 855840 6156720 CMS_0802 Clavibacter michiganensis subsp. sepedonicus oxygenase YP_001709563.1 855373 R 31964 CDS YP_001709564.1 170781232 6156721 855944..856930 1 NC_010407.1 DeoR family transcriptional regulator 856930 6156721 CMS_0803 Clavibacter michiganensis subsp. sepedonicus DeoR family transcriptional regulator YP_001709564.1 855944 D 31964 CDS YP_001709565.1 170781233 6156724 complement(860932..861414) 1 NC_010407.1 plasmid-related protein 861414 6156724 CMS_0810 Clavibacter michiganensis subsp. sepedonicus plasmid-related protein YP_001709565.1 860932 R 31964 CDS YP_001709566.1 170781234 6156725 861453..862064 1 NC_010407.1 phage-like protein 862064 6156725 CMS_0811 Clavibacter michiganensis subsp. sepedonicus phage-like protein YP_001709566.1 861453 D 31964 CDS YP_001709567.1 170781235 6156726 complement(861988..863124) 1 NC_010407.1 phage-like protein 863124 6156726 CMS_0812 Clavibacter michiganensis subsp. sepedonicus phage-like protein YP_001709567.1 861988 R 31964 CDS YP_001709568.1 170781236 6156727 complement(863450..863698) 1 NC_010407.1 hypothetical protein 863698 6156727 CMS_0813 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709568.1 863450 R 31964 CDS YP_001709569.1 170781237 6156728 864027..864857 1 NC_010407.1 short-chain oxidoreductase; short-chain dehydrogenase 864857 6156728 CMS_0814 Clavibacter michiganensis subsp. sepedonicus short-chain dehydrogenase YP_001709569.1 864027 D 31964 CDS YP_001709570.1 170781238 6156729 complement(864892..865335) 1 NC_010407.1 hypothetical protein 865335 6156729 CMS_0815 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709570.1 864892 R 31964 CDS YP_001709571.1 170781239 6156730 complement(865344..865601) 1 NC_010407.1 phage-like protein 865601 6156730 CMS_0816 Clavibacter michiganensis subsp. sepedonicus phage-like protein YP_001709571.1 865344 R 31964 CDS YP_001709572.1 170781240 6156731 complement(865669..865896) 1 NC_010407.1 hypothetical protein 865896 6156731 CMS_0817 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709572.1 865669 R 31964 CDS YP_001709573.1 170781241 6156732 complement(865946..866572) 1 NC_010407.1 DNA-methyltransferase 866572 6156732 CMS_0818 Clavibacter michiganensis subsp. sepedonicus DNA-methyltransferase YP_001709573.1 865946 R 31964 CDS YP_001709574.1 170781242 6156733 complement(866569..867099) 1 NC_010407.1 sigma factor 867099 6156733 CMS_0819 Clavibacter michiganensis subsp. sepedonicus sigma factor YP_001709574.1 866569 R 31964 CDS YP_001709575.1 170781243 6156734 867415..868176 1 NC_010407.1 two component system response regulator 868176 6156734 CMS_0820 Clavibacter michiganensis subsp. sepedonicus two component system response regulator YP_001709575.1 867415 D 31964 CDS YP_001709576.1 170781244 6156735 868446..869714 1 NC_010407.1 sortase-sorted surface protein 869714 6156735 CMS_0821 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface protein YP_001709576.1 868446 D 31964 CDS YP_001709577.1 170781245 6156736 869890..871104 1 NC_010407.1 oxidoreductase 871104 6156736 CMS_0822 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709577.1 869890 D 31964 CDS YP_001709578.1 170781246 6156737 871155..871877 1 NC_010407.1 hypothetical protein 871877 6156737 CMS_0823 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709578.1 871155 D 31964 CDS YP_001709579.1 170781247 6156738 872050..872742 1 NC_010407.1 No obvious LPXTG motif; sortase-sorted surface protein 872742 6156738 CMS_0824 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface protein YP_001709579.1 872050 D 31964 CDS YP_001709580.1 170781248 6156739 872739..874190 1 NC_010407.1 hypothetical protein 874190 6156739 CMS_0825 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709580.1 872739 D 31964 CDS YP_001709581.1 170781249 6156740 complement(874228..875241) 1 NC_010407.1 LacI family transcriptional regulator 875241 6156740 CMS_0826 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001709581.1 874228 R 31964 CDS YP_001709582.1 170781250 6156741 complement(875304..876026) 1 NC_010407.1 hypothetical protein 876026 6156741 CMS_0827 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709582.1 875304 R 31964 CDS YP_001709583.1 170781251 6156742 complement(876077..877249) 1 NC_010407.1 glycosyl transferase 877249 6156742 CMS_0828 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709583.1 876077 R 31964 CDS YP_001709584.1 170781252 6156743 complement(877416..878027) 1 NC_010407.1 hypothetical protein 878027 6156743 CMS_0829 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709584.1 877416 R 31964 CDS YP_001709585.1 170781253 6156744 complement(878037..878228) 1 NC_010407.1 hypothetical protein 878228 6156744 CMS_0829A Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709585.1 878037 R 31964 CDS YP_001709586.1 170781254 6156745 878364..878903 1 NC_010407.1 hypothetical protein 878903 6156745 CMS_0830 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709586.1 878364 D 31964 CDS YP_001709587.1 170781255 6156746 878900..879280 1 NC_010407.1 hypothetical protein 879280 6156746 CMS_0831 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709587.1 878900 D 31964 CDS YP_001709588.1 170781256 6156747 879277..879756 1 NC_010407.1 hypothetical protein 879756 6156747 CMS_0832 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709588.1 879277 D 31964 CDS YP_001709589.1 170781257 6156748 879766..880359 1 NC_010407.1 nudix hydrolase 880359 6156748 CMS_0833 Clavibacter michiganensis subsp. sepedonicus nudix hydrolase YP_001709589.1 879766 D 31964 CDS YP_001709590.1 170781258 6156749 complement(880373..881380) 1 NC_010407.1 D-alanine--D-alanine ligase 881380 6156749 CMS_0834 Clavibacter michiganensis subsp. sepedonicus D-alanine--D-alanine ligase YP_001709590.1 880373 R 31964 CDS YP_001709591.1 170781259 6156750 881561..882085 1 NC_010407.1 hypothetical protein 882085 6156750 CMS_0835 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709591.1 881561 D 31964 CDS YP_001709592.1 170781260 6156751 complement(882180..882764) 1 NC_010407.1 hypothetical protein 882764 6156751 CMS_0836 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709592.1 882180 R 31964 CDS YP_001709593.1 170781261 6156752 883039..884208 1 NC_010407.1 sugar binding protein 884208 6156752 CMS_0837 Clavibacter michiganensis subsp. sepedonicus sugar binding protein YP_001709593.1 883039 D 31964 CDS YP_001709594.1 170781262 6156753 884283..885197 1 NC_010407.1 transport protein 885197 6156753 CMS_0838 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709594.1 884283 D 31964 CDS YP_001709595.1 170781263 6156754 885190..886071 1 NC_010407.1 transport protein 886071 6156754 CMS_0839 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709595.1 885190 D 31964 CDS YP_001709596.1 170781264 6156755 886151..886921 1 NC_010407.1 hypothetical protein 886921 6156755 CMS_0840 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709596.1 886151 D 31964 CDS YP_001709597.1 170781265 6156756 886918..888138 1 NC_010407.1 oxidoreductase 888138 6156756 CMS_0841 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709597.1 886918 D 31964 CDS YP_001709598.1 170781266 6156757 888159..889514 1 NC_010407.1 ROK family transcriptional regulator 889514 6156757 CMS_0842 Clavibacter michiganensis subsp. sepedonicus ROK family transcriptional regulator YP_001709598.1 888159 D 31964 CDS YP_001709599.1 170781267 6156758 889511..890167 1 NC_010407.1 hydrolase 890167 6156758 CMS_0843 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709599.1 889511 D 31964 CDS YP_001709600.1 170781268 6156759 complement(890205..891107) 1 NC_010407.1 hypothetical protein 891107 6156759 CMS_0844 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709600.1 890205 R 31964 CDS YP_001709601.1 170781269 6156760 891381..891971 1 NC_010407.1 monofunctional chorismate mutase 891971 aroQ 6156760 aroQ Clavibacter michiganensis subsp. sepedonicus monofunctional chorismate mutase YP_001709601.1 891381 D 31964 CDS YP_001709602.1 170781270 6158611 complement(892137..892475) 1 NC_010407.1 hypothetical protein 892475 6158611 CMS_0846 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709602.1 892137 R 31964 CDS YP_001709603.1 170781271 6156761 complement(892534..893025) 1 NC_010407.1 hypothetical protein 893025 6156761 CMS_0847 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709603.1 892534 R 31964 CDS YP_001709604.1 170781272 6156762 complement(893260..893709) 1 NC_010407.1 hypothetical protein 893709 6156762 CMS_0848 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709604.1 893260 R 31964 CDS YP_001709605.1 170781273 6156763 893814..894422 1 NC_010407.1 hypothetical protein 894422 6156763 CMS_0849 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709605.1 893814 D 31964 CDS YP_001709606.1 170781274 6156764 complement(894389..894856) 1 NC_010407.1 hypothetical protein 894856 6156764 CMS_0850 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709606.1 894389 R 31964 CDS YP_001709607.1 170781275 6156765 complement(894942..895880) 1 NC_010407.1 hypothetical protein 895880 6156765 CMS_0851 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709607.1 894942 R 31964 CDS YP_001709608.1 170781276 6156766 896046..896564 1 NC_010407.1 TetR family transcriptional regulator 896564 6156766 CMS_0852 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001709608.1 896046 D 31964 CDS YP_001709609.1 170781277 6156767 896620..897069 1 NC_010407.1 hypothetical protein 897069 6156767 CMS_0853 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709609.1 896620 D 31964 CDS YP_001709610.1 170781278 6156768 897172..897525 1 NC_010407.1 hypothetical protein 897525 6156768 CMS_0854 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709610.1 897172 D 31964 CDS YP_001709611.1 170781279 6156769 complement(897662..898354) 1 NC_010407.1 hypothetical protein 898354 6156769 CMS_0855 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709611.1 897662 R 31964 CDS YP_001709612.1 170781280 6156770 complement(898451..899425) 1 NC_010407.1 DeoR family transcriptional regulator 899425 6156770 CMS_0856 Clavibacter michiganensis subsp. sepedonicus DeoR family transcriptional regulator YP_001709612.1 898451 R 31964 CDS YP_001709613.1 170781281 6156771 899566..900549 1 NC_010407.1 oxidoreductase 900549 6156771 CMS_0857 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709613.1 899566 D 31964 CDS YP_001709614.1 170781282 6156772 900678..901184 1 NC_010407.1 RNA polymerase sigma factor 901184 6156772 CMS_0858 Clavibacter michiganensis subsp. sepedonicus RNA polymerase sigma factor YP_001709614.1 900678 D 31964 CDS YP_001709615.1 170781283 6156773 901181..901978 1 NC_010407.1 hypothetical protein 901978 6156773 CMS_0859 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709615.1 901181 D 31964 CDS YP_001709616.1 170781284 6156774 902020..902595 1 NC_010407.1 DNA-binding protein 902595 6156774 CMS_0860 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001709616.1 902020 D 31964 CDS YP_001709617.1 170781285 6156775 902622..903161 1 NC_010407.1 hypothetical protein 903161 6156775 CMS_0861 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709617.1 902622 D 31964 CDS YP_001709618.1 170781286 6156776 903283..904623 1 NC_010407.1 multidrug efflux protein 904623 6156776 CMS_0862 Clavibacter michiganensis subsp. sepedonicus multidrug efflux protein YP_001709618.1 903283 D 31964 CDS YP_001709619.1 170781287 6156777 complement(904830..905720) 1 NC_010407.1 hypothetical protein 905720 6156777 CMS_0863 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709619.1 904830 R 31964 CDS YP_001709620.1 170781288 6156778 905852..906169 1 NC_010407.1 hypothetical protein 906169 6156778 CMS_0864 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709620.1 905852 D 31964 CDS YP_001709621.1 170781289 6156780 complement(906989..907483) 1 NC_010407.1 hypothetical protein 907483 6156780 CMS_0866 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709621.1 906989 R 31964 CDS YP_001709622.1 170781290 6156781 complement(907507..908526) 1 NC_010407.1 LacI family transcriptional regulator 908526 6156781 CMS_0867 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001709622.1 907507 R 31964 CDS YP_001709623.1 170781291 6156782 908741..910033 1 NC_010407.1 solute-binding transport protein 910033 6156782 CMS_0868 Clavibacter michiganensis subsp. sepedonicus solute-binding transport protein YP_001709623.1 908741 D 31964 CDS YP_001709624.1 170781292 6156783 910217..911035 1 NC_010407.1 transport protein 911035 6156783 CMS_0869 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709624.1 910217 D 31964 CDS YP_001709625.1 170781293 6156784 911032..911937 1 NC_010407.1 intgral membrane transport protein 911937 6156784 CMS_0870 Clavibacter michiganensis subsp. sepedonicus intgral membrane transport protein YP_001709625.1 911032 D 31964 CDS YP_001709626.1 170781294 6156785 911934..914294 1 NC_010407.1 beta-xylosidase 914294 6156785 CMS_0871 Clavibacter michiganensis subsp. sepedonicus beta-xylosidase YP_001709626.1 911934 D 31964 CDS YP_001709627.1 170781295 6156786 complement(914741..915145) 1 NC_010407.1 hypothetical protein 915145 6156786 CMS_0872 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709627.1 914741 R 31964 CDS YP_001709628.1 170781296 6156787 complement(915385..916242) 1 NC_010407.1 DNA-binding protein 916242 6156787 CMS_0873 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001709628.1 915385 R 31964 CDS YP_001709629.1 170781297 6156788 916344..917024 1 NC_010407.1 short chain oxidoreductase 917024 6156788 CMS_0874 Clavibacter michiganensis subsp. sepedonicus short chain oxidoreductase YP_001709629.1 916344 D 31964 CDS YP_001709630.1 170781298 6156789 917085..917483 1 NC_010407.1 hypothetical protein 917483 6156789 CMS_0875 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709630.1 917085 D 31964 CDS YP_001709631.1 170781299 6156790 917517..918083 1 NC_010407.1 hypothetical protein 918083 6156790 CMS_0876 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709631.1 917517 D 31964 CDS YP_001709632.1 170781300 6156791 complement(918049..918348) 1 NC_010407.1 hypothetical protein 918348 6156791 CMS_0877 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709632.1 918049 R 31964 CDS YP_001709633.1 170781301 6156792 918462..919355 1 NC_010407.1 hydrolase 919355 6156792 CMS_0878 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709633.1 918462 D 31964 CDS YP_001709634.1 170781302 6156793 919429..920670 1 NC_010407.1 hypothetical protein 920670 6156793 CMS_0879 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709634.1 919429 D 31964 CDS YP_001709635.1 170781303 6156795 921400..922941 1 NC_010407.1 alpha-N-arabinofuranosidase 922941 abfA 6156795 abfA Clavibacter michiganensis subsp. sepedonicus alpha-N-arabinofuranosidase YP_001709635.1 921400 D 31964 CDS YP_001709636.1 170781304 6158585 complement(923009..923383) 1 NC_010407.1 Lsr2-like protein 923383 6158585 CMS_0882 Clavibacter michiganensis subsp. sepedonicus Lsr2-like protein YP_001709636.1 923009 R 31964 CDS YP_001709637.1 170781305 6156796 923483..924556 1 NC_010407.1 hypothetical protein 924556 6156796 CMS_0883 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709637.1 923483 D 31964 CDS YP_001709638.1 170781306 6156797 925134..926135 1 NC_010407.1 oxidoreductase 926135 6156797 CMS_0884 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709638.1 925134 D 31964 CDS YP_001709639.1 170781307 6156798 926201..928393 1 NC_010407.1 ATP-dependent protease ATP-binding subunit 928393 6156798 CMS_0885 Clavibacter michiganensis subsp. sepedonicus ATP-dependent protease ATP-binding subunit YP_001709639.1 926201 D 31964 CDS YP_001709640.1 170781308 6156799 complement(928436..929080) 1 NC_010407.1 ABC transporter ATP-binding protein 929080 6156799 CMS_0886 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001709640.1 928436 R 31964 CDS YP_001709641.1 170781309 6156800 complement(929099..929791) 1 NC_010407.1 transport protein 929791 6156800 CMS_0887 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709641.1 929099 R 31964 CDS YP_001709642.1 170781310 6156804 complement(932087..934270) 1 NC_010407.1 alpha-galactosidase 934270 rafA 6156804 rafA Clavibacter michiganensis subsp. sepedonicus alpha-galactosidase YP_001709642.1 932087 R 31964 CDS YP_001709643.1 170781311 6158919 complement(934356..934796) 1 NC_010407.1 hypothetical protein 934796 6158919 CMS_0892 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709643.1 934356 R 31964 CDS YP_001709644.1 170781312 6156805 934832..935836 1 NC_010407.1 oxidoreductase 935836 6156805 CMS_0893 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709644.1 934832 D 31964 CDS YP_001709645.1 170781313 6156806 935844..937052 1 NC_010407.1 dipeptidase 937052 6156806 CMS_0894 Clavibacter michiganensis subsp. sepedonicus dipeptidase YP_001709645.1 935844 D 31964 CDS YP_001709646.1 170781314 6156807 937097..937903 1 NC_010407.1 hypothetical protein 937903 6156807 CMS_0895 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709646.1 937097 D 31964 CDS YP_001709647.1 170781315 6156808 complement(937948..939759) 1 NC_010407.1 hypothetical protein 939759 6156808 CMS_0896 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709647.1 937948 R 31964 CDS YP_001709648.1 170781316 6156809 complement(939752..940156) 1 NC_010407.1 hypothetical protein 940156 6156809 CMS_0897 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709648.1 939752 R 31964 CDS YP_001709649.1 170781317 6156810 complement(940193..941464) 1 NC_010407.1 hypothetical protein 941464 6156810 CMS_0898 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709649.1 940193 R 31964 CDS YP_001709650.1 170781318 6156811 complement(941699..942961) 1 NC_010407.1 hypothetical protein 942961 6156811 CMS_0899 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709650.1 941699 R 31964 CDS YP_001709651.1 170781319 6156812 complement(943192..943557) 1 NC_010407.1 hypothetical protein 943557 6156812 CMS_0900 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709651.1 943192 R 31964 CDS YP_001709652.1 170781320 6156813 complement(943738..944343) 1 NC_010407.1 hypothetical protein 944343 6156813 CMS_0901 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709652.1 943738 R 31964 CDS YP_001709653.1 170781321 6156814 complement(944340..944888) 1 NC_010407.1 hypothetical protein 944888 6156814 CMS_0902 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709653.1 944340 R 31964 CDS YP_001709654.1 170781322 6156815 complement(944915..945289) 1 NC_010407.1 hypothetical protein 945289 6156815 CMS_0903 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709654.1 944915 R 31964 CDS YP_001709655.1 170781323 6156816 complement(945286..945474) 1 NC_010407.1 hypothetical protein 945474 6156816 CMS_0904 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709655.1 945286 R 31964 CDS YP_001709656.1 170781324 6156817 complement(945471..945899) 1 NC_010407.1 hypothetical protein 945899 6156817 CMS_0905 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709656.1 945471 R 31964 CDS YP_001709657.1 170781325 6156818 complement(946016..947197) 1 NC_010407.1 AraC family transcriptional regulator 947197 6156818 CMS_0906 Clavibacter michiganensis subsp. sepedonicus AraC family transcriptional regulator YP_001709657.1 946016 R 31964 CDS YP_001709658.1 170781326 6156819 complement(947359..948300) 1 NC_010407.1 hypothetical protein 948300 6156819 CMS_0907 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709658.1 947359 R 31964 CDS YP_001709659.1 170781327 6156820 948627..949589 1 NC_010407.1 Nu; insertion element ISCmi2 transposase 949589 6156820 CMS_0908 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709659.1 948627 D 31964 CDS YP_001709660.1 170781328 6156821 complement(949586..950128) 1 NC_010407.1 hypothetical protein 950128 6156821 CMS_0909 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709660.1 949586 R 31964 CDS YP_001709661.1 170781329 6156822 950378..950770 1 NC_010407.1 hypothetical protein 950770 6156822 CMS_0910 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709661.1 950378 D 31964 CDS YP_001709662.1 170781330 6156823 complement(950797..951549) 1 NC_010407.1 GntR family transcriptional regulator 951549 6156823 CMS_0911 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001709662.1 950797 R 31964 CDS YP_001709663.1 170781331 6156824 951633..952163 1 NC_010407.1 PTS system transporter subunit IIA 952163 6156824 CMS_0912 Clavibacter michiganensis subsp. sepedonicus PTS system transporter subunit IIA YP_001709663.1 951633 D 31964 CDS YP_001709664.1 170781332 6156825 952482..954587 1 NC_010407.1 PTS transport system EIIIc component/glucosamine-6-phosphate deaminase fusion protein 954587 6156825 CMS_0913 Clavibacter michiganensis subsp. sepedonicus PTS transport system EIIIc component/glucosamine-6-phosphate deaminase fusion protein YP_001709664.1 952482 D 31964 CDS YP_001709665.1 170781333 6158838 complement(955806..959009) 1 NC_010407.1 alpha-mannosidase 959009 6158838 CMS_0916 Clavibacter michiganensis subsp. sepedonicus alpha-mannosidase YP_001709665.1 955806 R 31964 CDS YP_001709666.1 170781334 6156827 complement(959076..960326) 1 NC_010407.1 glucosidase 960326 6156827 CMS_0917 Clavibacter michiganensis subsp. sepedonicus glucosidase YP_001709666.1 959076 R 31964 CDS YP_001709667.1 170781335 6156828 complement(960416..961141) 1 NC_010407.1 DeoR family transcriptional regulator 961141 6156828 CMS_0918 Clavibacter michiganensis subsp. sepedonicus DeoR family transcriptional regulator YP_001709667.1 960416 R 31964 CDS YP_001709668.1 170781336 6156829 961369..962391 1 NC_010407.1 carbohydrate kinase 962391 6156829 CMS_0919 Clavibacter michiganensis subsp. sepedonicus carbohydrate kinase YP_001709668.1 961369 D 31964 CDS YP_001709669.1 170781337 6156830 962475..963761 1 NC_010407.1 extracellular solute-binding transport protein 963761 6156830 CMS_0920 Clavibacter michiganensis subsp. sepedonicus extracellular solute-binding transport protein YP_001709669.1 962475 D 31964 CDS YP_001709670.1 170781338 6156831 963758..964792 1 NC_010407.1 transport protein 964792 6156831 CMS_0921 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709670.1 963758 D 31964 CDS YP_001709671.1 170781339 6156832 964912..965712 1 NC_010407.1 transport protein 965712 6156832 CMS_0922 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709671.1 964912 D 31964 CDS YP_001709672.1 170781340 6156833 965709..966473 1 NC_010407.1 glucosamine-6-phosphate deaminase 966473 6156833 CMS_0923 Clavibacter michiganensis subsp. sepedonicus glucosamine-6-phosphate deaminase YP_001709672.1 965709 D 31964 CDS YP_001709673.1 170781341 6156834 966570..969560 1 NC_010407.1 beta-galatosidase 969560 lacZ1 6156834 lacZ1 Clavibacter michiganensis subsp. sepedonicus beta-galatosidase YP_001709673.1 966570 D 31964 CDS YP_001709674.1 170781342 6158781 complement(969603..970091) 1 NC_010407.1 hypothetical protein 970091 6158781 CMS_0925 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709674.1 969603 R 31964 CDS YP_001709675.1 170781343 6156835 970375..970947 1 NC_010407.1 oxidoreductase 970947 6156835 CMS_0926 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709675.1 970375 D 31964 CDS YP_001709676.1 170781344 6156836 970999..971229 1 NC_010407.1 hypothetical protein 971229 6156836 CMS_0927 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709676.1 970999 D 31964 CDS YP_001709677.1 170781345 6156837 971395..972408 1 NC_010407.1 substrate-binding transport protein 972408 6156837 CMS_0928 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001709677.1 971395 D 31964 CDS YP_001709678.1 170781346 6156838 972483..973508 1 NC_010407.1 transport protein 973508 6156838 CMS_0929 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709678.1 972483 D 31964 CDS YP_001709679.1 170781347 6156839 973505..974275 1 NC_010407.1 Fe uptake system permease 974275 6156839 CMS_0930 Clavibacter michiganensis subsp. sepedonicus Fe uptake system permease YP_001709679.1 973505 D 31964 CDS YP_001709680.1 170781348 6156840 974373..975335 1 NC_010407.1 N/R; insertion element IS1121 transposase 975335 6156840 CMS_0931 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709680.1 974373 D 31964 CDS YP_001709681.1 170781349 6156841 complement(975346..976068) 1 NC_010407.1 hypothetical protein 976068 6156841 CMS_0932 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709681.1 975346 R 31964 CDS YP_001709682.1 170781350 6156842 976149..977180 1 NC_010407.1 LacI family transcriptional regulator 977180 6156842 CMS_0933 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001709682.1 976149 D 31964 CDS YP_001709683.1 170781351 6156843 complement(977177..978139) 1 NC_010407.1 Nu; insertion element ISCmi2 transposase 978139 6156843 CMS_0934 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709683.1 977177 R 31964 CDS YP_001709684.1 170781352 6156844 978337..979635 1 NC_010407.1 substrate-binding transport protein 979635 6156844 CMS_0935 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001709684.1 978337 D 31964 CDS YP_001709685.1 170781353 6156845 979705..980721 1 NC_010407.1 transport protein 980721 6156845 CMS_0936 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709685.1 979705 D 31964 CDS YP_001709686.1 170781354 6156846 980871..981707 1 NC_010407.1 transport protein 981707 6156846 CMS_0937 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709686.1 980871 D 31964 CDS YP_001709687.1 170781355 6156847 981713..982717 1 NC_010407.1 hypothetical protein 982717 6156847 CMS_0938 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709687.1 981713 D 31964 CDS YP_001709688.1 170781356 6156848 982779..984848 1 NC_010407.1 levanase 984848 6156848 CMS_0939 Clavibacter michiganensis subsp. sepedonicus levanase YP_001709688.1 982779 D 31964 CDS YP_001709689.1 170781357 6156849 985206..985550 1 NC_010407.1 hypothetical protein 985550 6156849 CMS_0940 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709689.1 985206 D 31964 CDS YP_001709690.1 170781358 6156850 985774..986592 1 NC_010407.1 aquaporin 986592 6156850 CMS_0941 Clavibacter michiganensis subsp. sepedonicus aquaporin YP_001709690.1 985774 D 31964 CDS YP_001709691.1 170781359 6156851 986683..987855 1 NC_010407.1 Contains domains (PF02987, Late embryogenesis abundant protein) common to plant proteins.; hypothetical protein 987855 6156851 CMS_0942 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709691.1 986683 D 31964 CDS YP_001709692.1 170781360 6156853 complement(988547..988990) 1 NC_010407.1 hypothetical protein 988990 6156853 CMS_0945 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709692.1 988547 R 31964 CDS YP_001709693.1 170781361 6156854 complement(989067..989534) 1 NC_010407.1 hypothetical protein 989534 6156854 CMS_0946 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709693.1 989067 R 31964 CDS YP_001709694.1 170781362 6156855 complement(989531..990661) 1 NC_010407.1 transport protein 990661 6156855 CMS_0947 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709694.1 989531 R 31964 CDS YP_001709695.1 170781363 6156856 complement(990658..991539) 1 NC_010407.1 ABC transporter ATP-binding protein 991539 6156856 CMS_0948 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001709695.1 990658 R 31964 CDS YP_001709696.1 170781364 6156857 991774..992139 1 NC_010407.1 hypothetical protein 992139 6156857 CMS_0949 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709696.1 991774 D 31964 CDS YP_001709697.1 170781365 6156858 complement(992130..993020) 1 NC_010407.1 hypothetical protein 993020 6156858 CMS_0950 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709697.1 992130 R 31964 CDS YP_001709698.1 170781366 6156859 complement(993017..993811) 1 NC_010407.1 oxidoreductase 993811 6156859 CMS_0951 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709698.1 993017 R 31964 CDS YP_001709699.1 170781367 6156860 993871..994647 1 NC_010407.1 oxidoreductase 994647 6156860 CMS_0952 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709699.1 993871 D 31964 CDS YP_001709700.1 170781368 6156861 complement(994667..995458) 1 NC_010407.1 hypothetical protein 995458 6156861 CMS_0953 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709700.1 994667 R 31964 CDS YP_001709701.1 170781369 6156862 995609..997030 1 NC_010407.1 glycerol-3-phosphate transporter 997030 glpT 6156862 glpT Clavibacter michiganensis subsp. sepedonicus glycerol-3-phosphate transporter YP_001709701.1 995609 D 31964 CDS YP_001709702.1 170781370 6156863 997621..998301 1 NC_010407.1 oxidoreductase 998301 6156863 CMS_0956 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709702.1 997621 D 31964 CDS YP_001709703.1 170781371 6156864 complement(998635..999384) 1 NC_010407.1 two-component system response regulator 999384 6156864 CMS_0957 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001709703.1 998635 R 31964 CDS YP_001709704.1 170781372 6156865 complement(999381..1000817) 1 NC_010407.1 two-component system sensor kinase 1000817 6156865 CMS_0958 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001709704.1 999381 R 31964 CDS YP_001709705.1 170781373 6156867 complement(1002942..1004912) 1 NC_010407.1 Similarity to downstream CDS suggests tandem duplication.; glycosyl hydrolase 1004912 6156867 CMS_0960 Clavibacter michiganensis subsp. sepedonicus glycosyl hydrolase YP_001709705.1 1002942 R 31964 CDS YP_001709706.1 170781374 6156868 1005353..1006888 1 NC_010407.1 drug efflux protein 1006888 6156868 CMS_0961 Clavibacter michiganensis subsp. sepedonicus drug efflux protein YP_001709706.1 1005353 D 31964 CDS YP_001709707.1 170781375 6156869 1006986..1007429 1 NC_010407.1 hypothetical protein 1007429 6156869 CMS_0962 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709707.1 1006986 D 31964 CDS YP_001709708.1 170781376 6156870 complement(1007426..1008643) 1 NC_010407.1 C-terminal region matches No N-terminal matches. Non-heme chloroperoxidase from Pseudomonas fluorescens UniProt:PRXC_PSEFL (EMBL:AF031153).; hydrolase 1008643 6156870 CMS_0963 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709708.1 1007426 R 31964 CDS YP_001709709.1 170781377 6156871 1008706..1009152 1 NC_010407.1 hypothetical protein 1009152 6156871 CMS_0964 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709709.1 1008706 D 31964 CDS YP_001709710.1 170781378 6156872 complement(1009194..1010627) 1 NC_010407.1 phytoene dehydrogenase 1010627 crtI 6156872 crtI Clavibacter michiganensis subsp. sepedonicus phytoene dehydrogenase YP_001709710.1 1009194 R 31964 CDS YP_001709711.1 170781379 6158643 complement(1010624..1011520) 1 NC_010407.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 1011520 ubiA 6158643 ubiA Clavibacter michiganensis subsp. sepedonicus prenyltransferase YP_001709711.1 1010624 R 31964 CDS YP_001709712.1 170781380 6158642 1011587..1012783 1 NC_010407.1 glycosyl transferase 1012783 6158642 CMS_0967 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709712.1 1011587 D 31964 CDS YP_001709713.1 170781381 6156873 complement(1012837..1013550) 1 NC_010407.1 oxidoreductase 1013550 6156873 CMS_0968 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709713.1 1012837 R 31964 CDS YP_001709714.1 170781382 6156874 1013623..1014162 1 NC_010407.1 Contains TITITITITITITITITIT repeat at N-terminus.; MerR family transcriptional regulator 1014162 6156874 CMS_0969 Clavibacter michiganensis subsp. sepedonicus MerR family transcriptional regulator YP_001709714.1 1013623 D 31964 CDS YP_001709715.1 170781383 6156875 1014413..1014823 1 NC_010407.1 hypothetical protein 1014823 6156875 CMS_0970 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709715.1 1014413 D 31964 CDS YP_001709716.1 170781384 6156876 1014816..1015016 1 NC_010407.1 hypothetical protein 1015016 6156876 CMS_0971 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709716.1 1014816 D 31964 CDS YP_001709717.1 170781385 6156877 complement(1015124..1015438) 1 NC_010407.1 hypothetical protein 1015438 6156877 CMS_0972 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709717.1 1015124 R 31964 CDS YP_001709718.1 170781386 6156878 1015644..1016111 1 NC_010407.1 MarR family transcriptional regulator 1016111 6156878 CMS_0973 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001709718.1 1015644 D 31964 CDS YP_001709719.1 170781387 6156879 1016172..1016594 1 NC_010407.1 hydroperoxide resistance protein 1016594 6156879 CMS_0974 Clavibacter michiganensis subsp. sepedonicus hydroperoxide resistance protein YP_001709719.1 1016172 D 31964 CDS YP_001709720.1 170781388 6156880 1016594..1017001 1 NC_010407.1 hypothetical protein 1017001 6156880 CMS_0975 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709720.1 1016594 D 31964 CDS YP_001709721.1 170781389 6156881 complement(1017080..1017700) 1 NC_010407.1 hypothetical protein 1017700 6156881 CMS_0976 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709721.1 1017080 R 31964 CDS YP_001709722.1 170781390 6156882 complement(1017697..1018266) 1 NC_010407.1 hypothetical protein 1018266 6156882 CMS_0977 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709722.1 1017697 R 31964 CDS YP_001709723.1 170781391 6156883 1018397..1018609 1 NC_010407.1 hypothetical protein 1018609 6156883 CMS_0978 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709723.1 1018397 D 31964 CDS YP_001709724.1 170781392 6156884 1018697..1019128 1 NC_010407.1 hypothetical protein 1019128 6156884 CMS_0979 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709724.1 1018697 D 31964 CDS YP_001709725.1 170781393 6156886 complement(1020287..1021195) 1 NC_010407.1 possible secreted protein; Similarity with downstream CDS suggests tandem duplication.; hypothetical protein 1021195 6156886 CMS_0981 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709725.1 1020287 R 31964 CDS YP_001709726.1 170781394 6156887 complement(1021195..1021401) 1 NC_010407.1 hypothetical protein 1021401 6156887 CMS_0982 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709726.1 1021195 R 31964 CDS YP_001709727.1 170781395 6156888 complement(1021450..1022295) 1 NC_010407.1 lipase 1022295 lip 6156888 lip Clavibacter michiganensis subsp. sepedonicus lipase YP_001709727.1 1021450 R 31964 CDS YP_001709728.1 170781396 6158793 complement(1022475..1023767) 1 NC_010407.1 Nu; insertion element ISCmi3 transposase 1023767 6158793 CMS_0984 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi3 transposase YP_001709728.1 1022475 R 31964 CDS YP_001709729.1 170781397 6156889 complement(1023951..1024913) 1 NC_010407.1 N; insertion element ISCmi2 transposase 1024913 6156889 CMS_0985 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709729.1 1023951 R 31964 CDS YP_001709730.1 170781398 6156890 complement(1025038..1025799) 1 NC_010407.1 lactone hydrolase 1025799 6156890 CMS_0986 Clavibacter michiganensis subsp. sepedonicus lactone hydrolase YP_001709730.1 1025038 R 31964 CDS YP_001709731.1 170781399 6156891 complement(1025858..1026298) 1 NC_010407.1 hypothetical protein 1026298 6156891 CMS_0987 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709731.1 1025858 R 31964 CDS YP_001709732.1 170781400 6156892 1026404..1026673 1 NC_010407.1 hypothetical protein 1026673 6156892 CMS_0988 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709732.1 1026404 D 31964 CDS YP_001709733.1 170781401 6156893 1026763..1027893 1 NC_010407.1 hypothetical protein 1027893 6156893 CMS_0989 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709733.1 1026763 D 31964 CDS YP_001709734.1 170781402 6156894 complement(1027880..1029193) 1 NC_010407.1 hypothetical protein 1029193 6156894 CMS_0990 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709734.1 1027880 R 31964 CDS YP_001709735.1 170781403 6156895 1029264..1030199 1 NC_010407.1 ABC transporter ATP-binding protein 1030199 6156895 CMS_0991 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001709735.1 1029264 D 31964 CDS YP_001709736.1 170781404 6156896 1030196..1031059 1 NC_010407.1 ABC transport protein 1031059 6156896 CMS_0992 Clavibacter michiganensis subsp. sepedonicus ABC transport protein YP_001709736.1 1030196 D 31964 CDS YP_001709737.1 170781405 6156897 1031063..1032391 1 NC_010407.1 two-component system sensor kinase 1032391 6156897 CMS_0993 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001709737.1 1031063 D 31964 CDS YP_001709738.1 170781406 6156898 1032388..1033062 1 NC_010407.1 two-component system response regulator 1033062 6156898 CMS_0994 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001709738.1 1032388 D 31964 CDS YP_001709739.1 170781407 6156899 1033371..1034513 1 NC_010407.1 sugar-binding transport protein 1034513 6156899 CMS_0995 Clavibacter michiganensis subsp. sepedonicus sugar-binding transport protein YP_001709739.1 1033371 D 31964 CDS YP_001709740.1 170781408 6156900 1034636..1036180 1 NC_010407.1 sugar-transport ATP-binding protein 1036180 6156900 CMS_0996 Clavibacter michiganensis subsp. sepedonicus sugar-transport ATP-binding protein YP_001709740.1 1034636 D 31964 CDS YP_001709741.1 170781409 6156901 1036177..1037385 1 NC_010407.1 sugar transport permease 1037385 6156901 CMS_0997 Clavibacter michiganensis subsp. sepedonicus sugar transport permease YP_001709741.1 1036177 D 31964 CDS YP_001709742.1 170781410 6156902 1037452..1037784 1 NC_010407.1 hypothetical protein 1037784 6156902 CMS_0998 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709742.1 1037452 D 31964 CDS YP_001709743.1 170781411 6156903 complement(1037785..1038585) 1 NC_010407.1 Possibly sortase sorted though no clear LPXTG motif; signal peptidase 1038585 6156903 CMS_0999 Clavibacter michiganensis subsp. sepedonicus signal peptidase YP_001709743.1 1037785 R 31964 CDS YP_001709744.1 170781412 6156904 complement(1038611..1039513) 1 NC_010407.1 threonine/alanine-rich; hypothetical protein 1039513 6156904 CMS_1000 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709744.1 1038611 R 31964 CDS YP_001709745.1 170781413 6156905 complement(1039510..1040112) 1 NC_010407.1 hypothetical protein 1040112 6156905 CMS_1001 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709745.1 1039510 R 31964 CDS YP_001709746.1 170781414 6156906 complement(1040204..1040749) 1 NC_010407.1 hypothetical protein 1040749 6156906 CMS_1002 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709746.1 1040204 R 31964 CDS YP_001709747.1 170781415 6156907 1041119..1042753 1 NC_010407.1 two-component sensor kinase 1042753 6156907 CMS_1003 Clavibacter michiganensis subsp. sepedonicus two-component sensor kinase YP_001709747.1 1041119 D 31964 CDS YP_001709748.1 170781416 6156908 1042851..1044719 1 NC_010407.1 BCCT family transporter 1044719 6156908 CMS_1004 Clavibacter michiganensis subsp. sepedonicus BCCT family transporter YP_001709748.1 1042851 D 31964 CDS YP_001709749.1 170781417 6156909 1044844..1045860 1 NC_010407.1 hypothetical protein 1045860 6156909 CMS_1005 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709749.1 1044844 D 31964 CDS YP_001709750.1 170781418 6156910 1045916..1047094 1 NC_010407.1 nucleotide-binding protein 1047094 6156910 CMS_1006 Clavibacter michiganensis subsp. sepedonicus nucleotide-binding protein YP_001709750.1 1045916 D 31964 CDS YP_001709751.1 170781419 6156911 complement(1047224..1048339) 1 NC_010407.1 fatty acid desaturase 1048339 6156911 CMS_1007 Clavibacter michiganensis subsp. sepedonicus fatty acid desaturase YP_001709751.1 1047224 R 31964 CDS YP_001709752.1 170781420 6156912 complement(1048656..1049708) 1 NC_010407.1 oxidoreductase 1049708 6156912 CMS_1008 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709752.1 1048656 R 31964 CDS YP_001709753.1 170781421 6156913 complement(1049750..1050481) 1 NC_010407.1 hypothetical protein 1050481 6156913 CMS_1009 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709753.1 1049750 R 31964 CDS YP_001709754.1 170781422 6156914 1050626..1051273 1 NC_010407.1 hypothetical protein 1051273 6156914 CMS_1010 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709754.1 1050626 D 31964 CDS YP_001709755.1 170781423 6156916 complement(1052371..1055403) 1 NC_010407.1 alpha-mannosidase 1055403 6156916 CMS_1012 Clavibacter michiganensis subsp. sepedonicus alpha-mannosidase YP_001709755.1 1052371 R 31964 CDS YP_001709756.1 170781424 6156917 complement(1055534..1056364) 1 NC_010407.1 transport protein 1056364 6156917 CMS_1013 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709756.1 1055534 R 31964 CDS YP_001709757.1 170781425 6156918 complement(1056453..1057433) 1 NC_010407.1 transport protein 1057433 6156918 CMS_1014 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709757.1 1056453 R 31964 CDS YP_001709758.1 170781426 6156919 complement(1057478..1058887) 1 NC_010407.1 extracellular solute-binding protein 1058887 6156919 CMS_1015 Clavibacter michiganensis subsp. sepedonicus extracellular solute-binding protein YP_001709758.1 1057478 R 31964 CDS YP_001709759.1 170781427 6156920 complement(1059109..1060443) 1 NC_010407.1 ROK family transcriptional regulator 1060443 6156920 CMS_1016 Clavibacter michiganensis subsp. sepedonicus ROK family transcriptional regulator YP_001709759.1 1059109 R 31964 CDS YP_001709760.1 170781428 6156921 1060547..1061692 1 NC_010407.1 hypothetical protein 1061692 6156921 CMS_1017 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709760.1 1060547 D 31964 CDS YP_001709761.1 170781429 6156922 1061689..1061970 1 NC_010407.1 hypothetical protein 1061970 RS00183 6156922 RS00183 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709761.1 1061689 D 31964 CDS YP_001709762.1 170781430 6158971 1062076..1063038 1 NC_010407.1 N/R; insertion element IS1121 transposase 1063038 6158971 CMS_1019 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709762.1 1062076 D 31964 CDS YP_001709763.1 170781431 6156923 complement(1063049..1064362) 1 NC_010407.1 hypothetical protein 1064362 6156923 CMS_1020 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709763.1 1063049 R 31964 CDS YP_001709764.1 170781432 6156924 1064500..1065015 1 NC_010407.1 hypothetical protein 1065015 6156924 CMS_1021 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709764.1 1064500 D 31964 CDS YP_001709765.1 170781433 6156925 complement(1065046..1066239) 1 NC_010407.1 oxidoreductase 1066239 6156925 CMS_1022 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709765.1 1065046 R 31964 CDS YP_001709766.1 170781434 6156926 1066385..1066879 1 NC_010407.1 Weak match to PF01047 MarR family; MarR family transcriptional regulator 1066879 ery-ORF25 6156926 ery-ORF25 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001709766.1 1066385 D 31964 CDS YP_001709767.1 170781435 6158677 complement(1066895..1067692) 1 NC_010407.1 glycosyl transferase 1067692 6158677 CMS_1024 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709767.1 1066895 R 31964 CDS YP_001709768.1 170781436 6156927 complement(1067689..1070367) 1 NC_010407.1 hypothetical protein 1070367 6156927 CMS_1025 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709768.1 1067689 R 31964 CDS YP_001709769.1 170781437 6156928 1070620..1070877 1 NC_010407.1 hypothetical protein 1070877 6156928 CMS_1026 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709769.1 1070620 D 31964 CDS YP_001709770.1 170781438 6156929 complement(1070894..1071814) 1 NC_010407.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1071814 purC 6156929 purC Clavibacter michiganensis subsp. sepedonicus phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001709770.1 1070894 R 31964 CDS YP_001709771.1 170781439 6158897 complement(1071811..1073061) 1 NC_010407.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1073061 purD 6158897 purD Clavibacter michiganensis subsp. sepedonicus phosphoribosylamine--glycine ligase YP_001709771.1 1071811 R 31964 CDS YP_001709772.1 170781440 6158898 1073441..1073821 1 NC_010407.1 hypothetical protein 1073821 6158898 CMS_1029 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709772.1 1073441 D 31964 CDS YP_001709773.1 170781441 6156930 1073880..1074188 1 NC_010407.1 hypothetical protein 1074188 6156930 CMS_1030 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709773.1 1073880 D 31964 CDS YP_001709774.1 170781442 6156931 complement(1074240..1075754) 1 NC_010407.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1075754 purF 6156931 purF Clavibacter michiganensis subsp. sepedonicus amidophosphoribosyltransferase YP_001709774.1 1074240 R 31964 CDS YP_001709775.1 170781443 6158899 1075790..1076899 1 NC_010407.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1076899 purM 6158899 purM Clavibacter michiganensis subsp. sepedonicus phosphoribosylaminoimidazole synthetase YP_001709775.1 1075790 D 31964 CDS YP_001709776.1 170781444 6158902 complement(1077041..1077265) 1 NC_010407.1 hypothetical protein 1077265 6158902 CMS_1033 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709776.1 1077041 R 31964 CDS YP_001709777.1 170781445 6156932 1077460..1078590 1 NC_010407.1 oxidoreductase 1078590 6156932 CMS_1034 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709777.1 1077460 D 31964 CDS YP_001709778.1 170781446 6156933 complement(1078923..1079486) 1 NC_010407.1 hypothetical protein 1079486 6156933 CMS_1035 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709778.1 1078923 R 31964 CDS YP_001709779.1 170781447 6156934 complement(1079483..1079902) 1 NC_010407.1 hypothetical protein 1079902 6156934 CMS_1036 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709779.1 1079483 R 31964 CDS YP_001709780.1 170781448 6156935 complement(1079899..1080795) 1 NC_010407.1 hypothetical protein 1080795 6156935 CMS_1037 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709780.1 1079899 R 31964 CDS YP_001709781.1 170781449 6156936 complement(1080943..1083003) 1 NC_010407.1 hypothetical protein 1083003 6156936 CMS_1038 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709781.1 1080943 R 31964 CDS YP_001709782.1 170781450 6156937 complement(1083092..1083757) 1 NC_010407.1 hypothetical protein 1083757 6156937 CMS_1039 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709782.1 1083092 R 31964 CDS YP_001709783.1 170781451 6156938 1083851..1085263 1 NC_010407.1 GntR family transcriptional regulator 1085263 6156938 CMS_1040 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001709783.1 1083851 D 31964 CDS YP_001709784.1 170781452 6156939 1085312..1086457 1 NC_010407.1 hypothetical protein 1086457 6156939 CMS_1041 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709784.1 1085312 D 31964 CDS YP_001709785.1 170781453 6156940 1086567..1088648 1 NC_010407.1 Similarity to CMS1046 suggest local inverted duplication; glycogen debranching enzyme 1088648 6156940 CMS_1042 Clavibacter michiganensis subsp. sepedonicus glycogen debranching enzyme YP_001709785.1 1086567 D 31964 CDS YP_001709786.1 170781454 6156941 1088746..1089708 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 1089708 6156941 CMS_1043 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709786.1 1088746 D 31964 CDS YP_001709787.1 170781455 6156942 1089780..1092335 1 NC_010407.1 glycogen phosphorylase 1092335 glgP 6156942 glgP Clavibacter michiganensis subsp. sepedonicus glycogen phosphorylase YP_001709787.1 1089780 D 31964 CDS YP_001709788.1 170781456 6158719 complement(1092398..1093459) 1 NC_010407.1 hypothetical protein 1093459 6158719 CMS_1045 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709788.1 1092398 R 31964 CDS YP_001709789.1 170781457 6156943 complement(1093899..1095935) 1 NC_010407.1 Similarity to CMS1042 suggest local inverted duplication; glycogen debranching enzyme 1095935 6156943 CMS_1046 Clavibacter michiganensis subsp. sepedonicus glycogen debranching enzyme YP_001709789.1 1093899 R 31964 CDS YP_001709790.1 170781458 6156944 1095976..1097181 1 NC_010407.1 cysteine desulfurase 1097181 6156944 CMS_1047 Clavibacter michiganensis subsp. sepedonicus cysteine desulfurase YP_001709790.1 1095976 D 31964 CDS YP_001709791.1 170781459 6156945 1097178..1098371 1 NC_010407.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1098371 mnmA 6156945 mnmA Clavibacter michiganensis subsp. sepedonicus tRNA-specific 2-thiouridylase MnmA YP_001709791.1 1097178 D 31964 CDS YP_001709792.1 170781460 6159025 1098379..1100922 1 NC_010407.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 1100922 ligA 6159025 ligA Clavibacter michiganensis subsp. sepedonicus NAD-dependent DNA ligase LigA YP_001709792.1 1098379 D 31964 CDS YP_001709793.1 170781461 6158792 1101092..1102405 1 NC_010407.1 hypothetical protein 1102405 6158792 CMS_1050 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709793.1 1101092 D 31964 CDS YP_001709794.1 170781462 6156947 1103004..1103387 1 NC_010407.1 glutamyl-tRNA(Gln) amidotransferase subunit C 1103387 gatC 6156947 gatC Clavibacter michiganensis subsp. sepedonicus glutamyl-tRNA(Gln) amidotransferase subunit C YP_001709794.1 1103004 D 31964 CDS YP_001709795.1 170781463 6158711 1103395..1104945 1 NC_010407.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1104945 gatA 6158711 gatA Clavibacter michiganensis subsp. sepedonicus aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001709795.1 1103395 D 31964 CDS YP_001709796.1 170781464 6158709 1104945..1106447 1 NC_010407.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1106447 gatB 6158709 gatB Clavibacter michiganensis subsp. sepedonicus aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001709796.1 1104945 D 31964 CDS YP_001709797.1 170781465 6158710 1106444..1108081 1 NC_010407.1 ABC transporter 1108081 6158710 CMS_1055 Clavibacter michiganensis subsp. sepedonicus ABC transporter YP_001709797.1 1106444 D 31964 CDS YP_001709798.1 170781466 6156948 complement(1108100..1109749) 1 NC_010407.1 lipoprotein 1109749 6156948 CMS_1056 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001709798.1 1108100 R 31964 CDS YP_001709799.1 170781467 6156949 complement(1109759..1110568) 1 NC_010407.1 hypothetical protein 1110568 6156949 CMS_1057 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709799.1 1109759 R 31964 CDS YP_001709800.1 170781468 6156950 complement(1110681..1111643) 1 NC_010407.1 Nu; insertion element ISCmi2 transposase 1111643 6156950 CMS_1058 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709800.1 1110681 R 31964 CDS YP_001709801.1 170781469 6156951 complement(1111740..1113437) 1 NC_010407.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1113437 fadD 6156951 fadD Clavibacter michiganensis subsp. sepedonicus long-chain-fatty-acid--CoA ligase YP_001709801.1 1111740 R 31964 CDS YP_001709802.1 170781470 6158684 complement(1113505..1113951) 1 NC_010407.1 hypothetical protein 1113951 6158684 CMS_1060 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709802.1 1113505 R 31964 CDS YP_001709803.1 170781471 6156953 complement(1114408..1118565) 1 NC_010407.1 Seems to lack the appropriate stop codon.; Ftsk/SpoIIIE family protein 1118565 6156953 CMS_1062 Clavibacter michiganensis subsp. sepedonicus Ftsk/SpoIIIE family protein YP_001709803.1 1114408 R 31964 CDS YP_001709804.1 170781472 6156954 complement(1118562..1119455) 1 NC_010407.1 hypothetical protein 1119455 6156954 CMS_1063 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709804.1 1118562 R 31964 CDS YP_001709805.1 170781473 6156955 complement(1119458..1120768) 1 NC_010407.1 hypothetical protein 1120768 6156955 CMS_1064 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709805.1 1119458 R 31964 CDS YP_001709806.1 170781474 6156956 complement(1120765..1121022) 1 NC_010407.1 hypothetical protein 1121022 6156956 CMS_1065 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709806.1 1120765 R 31964 CDS YP_001709807.1 170781475 6156957 complement(1121012..1122169) 1 NC_010407.1 hypothetical protein 1122169 6156957 CMS_1066 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709807.1 1121012 R 31964 CDS YP_001709808.1 170781476 6156958 1122357..1122698 1 NC_010407.1 hypothetical protein 1122698 6156958 CMS_1067 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709808.1 1122357 D 31964 CDS YP_001709809.1 170781477 6156959 1122717..1123031 1 NC_010407.1 hypothetical protein 1123031 6156959 CMS_1068 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709809.1 1122717 D 31964 CDS YP_001709810.1 170781478 6156960 1123037..1124059 1 NC_010407.1 hypothetical protein 1124059 6156960 CMS_1069 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709810.1 1123037 D 31964 CDS YP_001709811.1 170781479 6156961 1124056..1124445 1 NC_010407.1 hypothetical protein 1124445 6156961 CMS_1070 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709811.1 1124056 D 31964 CDS YP_001709812.1 170781480 6156962 1124426..1124794 1 NC_010407.1 hypothetical protein 1124794 6156962 CMS_1071 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709812.1 1124426 D 31964 CDS YP_001709813.1 170781481 6156963 1124827..1127109 1 NC_010407.1 hypothetical protein 1127109 6156963 CMS_1072 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709813.1 1124827 D 31964 CDS YP_001709814.1 170781482 6156964 1127166..1127567 1 NC_010407.1 hypothetical protein 1127567 6156964 CMS_1073 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709814.1 1127166 D 31964 CDS YP_001709815.1 170781483 6156965 1127659..1127724 1 NC_010407.1 hypothetical protein 1127724 6156965 CMS_1074 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709815.1 1127659 D 31964 CDS YP_001709816.1 170781484 6156966 1127755..1127868 1 NC_010407.1 hypothetical protein 1127868 6156966 CMS_1075 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709816.1 1127755 D 31964 CDS YP_001709817.1 170781485 6156967 1127952..1128092 1 NC_010407.1 hypothetical protein 1128092 6156967 CMS_1076 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709817.1 1127952 D 31964 CDS YP_001709818.1 170781486 6156968 1128194..1128499 1 NC_010407.1 hypothetical protein 1128499 6156968 CMS_1077 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709818.1 1128194 D 31964 CDS YP_001709819.1 170781487 6156969 1128555..1128755 1 NC_010407.1 hypothetical protein 1128755 6156969 CMS_1078 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709819.1 1128555 D 31964 CDS YP_001709820.1 170781488 6156970 complement(1128790..1130238) 1 NC_010407.1 oxidoreductase 1130238 6156970 CMS_1079 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709820.1 1128790 R 31964 CDS YP_001709821.1 170781489 6156971 complement(1130248..1131246) 1 NC_010407.1 short chain dehydrogenase 1131246 6156971 CMS_1080 Clavibacter michiganensis subsp. sepedonicus short chain dehydrogenase YP_001709821.1 1130248 R 31964 CDS YP_001709822.1 170781490 6156972 complement(1131345..1133087) 1 NC_010407.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1133087 6156972 CMS_1081 Clavibacter michiganensis subsp. sepedonicus long-chain-fatty-acid--CoA ligase YP_001709822.1 1131345 R 31964 CDS YP_001709823.1 170781491 6156973 complement(1133098..1134057) 1 NC_010407.1 oxidoreductase 1134057 6156973 CMS_1082 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709823.1 1133098 R 31964 CDS YP_001709824.1 170781492 6156974 1134154..1134501 1 NC_010407.1 hypothetical protein 1134501 6156974 CMS_1083 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709824.1 1134154 D 31964 CDS YP_001709825.1 170781493 6156975 1134498..1135736 1 NC_010407.1 hydrolase 1135736 6156975 CMS_1084 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709825.1 1134498 D 31964 CDS YP_001709826.1 170781494 6156976 1135833..1136795 1 NC_010407.1 Nu/R; insertion element ISCmi2 transposase 1136795 6156976 CMS_1085 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001709826.1 1135833 D 31964 CDS YP_001709827.1 170781495 6156977 1136853..1138946 1 NC_010407.1 dipeptidyl-peptidase 1138946 6156977 CMS_1086 Clavibacter michiganensis subsp. sepedonicus dipeptidyl-peptidase YP_001709827.1 1136853 D 31964 CDS YP_001709828.1 170781496 6156978 complement(1138965..1139666) 1 NC_010407.1 haloacid dehalogenase 1139666 6156978 CMS_1087 Clavibacter michiganensis subsp. sepedonicus haloacid dehalogenase YP_001709828.1 1138965 R 31964 CDS YP_001709829.1 170781497 6156979 complement(1139722..1140447) 1 NC_010407.1 hypothetical protein 1140447 6156979 CMS_1088 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709829.1 1139722 R 31964 CDS YP_001709830.1 170781498 6156980 1140555..1142309 1 NC_010407.1 catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 1142309 6156980 CMS_1089 Clavibacter michiganensis subsp. sepedonicus pyruvate dehydrogenase YP_001709830.1 1140555 D 31964 CDS YP_001709831.1 170781499 6156981 1142372..1142689 1 NC_010407.1 hypothetical protein 1142689 6156981 CMS_1090 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709831.1 1142372 D 31964 CDS YP_001709832.1 170781500 6156982 complement(1142705..1143784) 1 NC_010407.1 zinc-binding dehydrogenase 1143784 6156982 CMS_1091 Clavibacter michiganensis subsp. sepedonicus zinc-binding dehydrogenase YP_001709832.1 1142705 R 31964 CDS YP_001709833.1 170781501 6156983 1143834..1144208 1 NC_010407.1 hypothetical protein 1144208 6156983 CMS_1092 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709833.1 1143834 D 31964 CDS YP_001709834.1 170781502 6156984 complement(1144171..1144962) 1 NC_010407.1 hypothetical protein 1144962 6156984 CMS_1093 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709834.1 1144171 R 31964 CDS YP_001709835.1 170781503 6156985 complement(1144962..1146053) 1 NC_010407.1 hypothetical protein 1146053 6156985 CMS_1094 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709835.1 1144962 R 31964 CDS YP_001709836.1 170781504 6156986 1146475..1148541 1 NC_010407.1 C-terminus duplicated downstream.; helicase 1148541 6156986 CMS_1095 Clavibacter michiganensis subsp. sepedonicus helicase YP_001709836.1 1146475 D 31964 CDS YP_001709837.1 170781505 6156987 1148699..1148830 1 NC_010407.1 hypothetical protein 1148830 6156987 CMS_1096 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709837.1 1148699 D 31964 CDS YP_001709838.1 170781506 6156988 complement(1148843..1149469) 1 NC_010407.1 hypothetical protein 1149469 6156988 CMS_1097 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709838.1 1148843 R 31964 CDS YP_001709839.1 170781507 6156990 1149893..1151185 1 NC_010407.1 N/I; insertion element ISCmi3 transposase 1151185 6156990 CMS_1099 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi3 transposase YP_001709839.1 1149893 D 31964 CDS YP_001709840.1 170781508 6156991 complement(1151265..1151486) 1 NC_010407.1 hypothetical protein 1151486 6156991 CMS_1100 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709840.1 1151265 R 31964 CDS YP_001709841.1 170781509 6156992 complement(1151479..1151571) 1 NC_010407.1 hypothetical protein 1151571 6156992 CMS_1100A Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709841.1 1151479 R 31964 CDS YP_001709842.1 170781510 6156993 complement(1151686..1151955) 1 NC_010407.1 hypothetical protein 1151955 6156993 CMS_1100B Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709842.1 1151686 R 31964 CDS YP_001709843.1 170781511 6156994 complement(1152062..1152238) 1 NC_010407.1 hypothetical protein 1152238 6156994 CMS_1100C Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709843.1 1152062 R 31964 CDS YP_001709844.1 170781512 6156995 complement(1152289..1153662) 1 NC_010407.1 transport protein 1153662 6156995 CMS_1101 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709844.1 1152289 R 31964 CDS YP_001709845.1 170781513 6156996 complement(1153777..1154667) 1 NC_010407.1 hypothetical protein 1154667 6156996 CMS_1101A Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709845.1 1153777 R 31964 CDS YP_001709846.1 170781514 6156997 complement(1154841..1157099) 1 NC_010407.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase 1157099 thiED 6156997 thiED Clavibacter michiganensis subsp. sepedonicus multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase YP_001709846.1 1154841 R 31964 CDS YP_001709847.1 170781515 6159012 complement(1157096..1157923) 1 NC_010407.1 hydroxyethylthiazole kinase 1157923 thiM 6159012 thiM Clavibacter michiganensis subsp. sepedonicus hydroxyethylthiazole kinase YP_001709847.1 1157096 R 31964 CDS YP_001709848.1 170781516 6159014 1158298..1158453 1 NC_010407.1 hypothetical protein 1158453 6159014 CMS_1104 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709848.1 1158298 D 31964 CDS YP_001709849.1 170781517 6156998 1159213..1159353 1 NC_010407.1 hypothetical protein 1159353 6156998 CMS_1105 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709849.1 1159213 D 31964 CDS YP_001709850.1 170781518 6156999 1159630..1159770 1 NC_010407.1 hypothetical protein 1159770 6156999 CMS_1106 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709850.1 1159630 D 31964 CDS YP_001709851.1 170781519 6157000 complement(1159991..1162156) 1 NC_010407.1 protease 1162156 6157000 CMS_1107 Clavibacter michiganensis subsp. sepedonicus protease YP_001709851.1 1159991 R 31964 CDS YP_001709852.1 170781520 6157001 complement(1162166..1162393) 1 NC_010407.1 hypothetical protein 1162393 6157001 CMS_1108 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709852.1 1162166 R 31964 CDS YP_001709853.1 170781521 6157002 complement(1162467..1163915) 1 NC_010407.1 maltokinase 1163915 6157002 CMS_1109 Clavibacter michiganensis subsp. sepedonicus maltokinase YP_001709853.1 1162467 R 31964 CDS YP_001709854.1 170781522 6157003 complement(1163940..1164209) 1 NC_010407.1 hypothetical protein 1164209 6157003 CMS_1110 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709854.1 1163940 R 31964 CDS YP_001709855.1 170781523 6157004 complement(1164322..1165608) 1 NC_010407.1 xylitol oxidase 1165608 xyoA 6157004 xyoA Clavibacter michiganensis subsp. sepedonicus xylitol oxidase YP_001709855.1 1164322 R 31964 CDS YP_001709856.1 170781524 6159104 complement(1165743..1168796) 1 NC_010407.1 beta-galactosidase 1168796 lacZ2 6159104 lacZ2 Clavibacter michiganensis subsp. sepedonicus beta-galactosidase YP_001709856.1 1165743 R 31964 CDS YP_001709857.1 170781525 6158782 complement(1168933..1169901) 1 NC_010407.1 transport protein 1169901 6158782 CMS_1113 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709857.1 1168933 R 31964 CDS YP_001709858.1 170781526 6157005 complement(1169898..1170914) 1 NC_010407.1 transport protein 1170914 6157005 CMS_1114 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709858.1 1169898 R 31964 CDS YP_001709859.1 170781527 6157007 complement(1172386..1172646) 1 NC_010407.1 hypothetical protein 1172646 6157007 CMS_1117 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709859.1 1172386 R 31964 CDS YP_001709860.1 170781528 6157008 1172830..1173261 1 NC_010407.1 hypothetical protein 1173261 6157008 CMS_1118 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709860.1 1172830 D 31964 CDS YP_001709861.1 170781529 6157009 1173293..1174744 1 NC_010407.1 hypothetical protein 1174744 6157009 CMS_1119 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709861.1 1173293 D 31964 CDS YP_001709862.1 170781530 6157010 1174794..1176002 1 NC_010407.1 efflux protein 1176002 6157010 CMS_1120 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001709862.1 1174794 D 31964 CDS YP_001709863.1 170781531 6157011 complement(1176794..1177147) 1 NC_010407.1 hypothetical protein 1177147 6157011 CMS_1122 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709863.1 1176794 R 31964 CDS YP_001709864.1 170781532 6157012 complement(1177590..1178339) 1 NC_010407.1 hypothetical protein 1178339 6157012 CMS_1123 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709864.1 1177590 R 31964 CDS YP_001709865.1 170781533 6157013 complement(1178549..1179481) 1 NC_010407.1 hypothetical protein 1179481 6157013 CMS_1124 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709865.1 1178549 R 31964 CDS YP_001709866.1 170781534 6157014 complement(1179534..1180265) 1 NC_010407.1 hypothetical protein 1180265 6157014 CMS_1125 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709866.1 1179534 R 31964 CDS YP_001709867.1 170781535 6157015 1180393..1181292 1 NC_010407.1 tranport protein 1181292 6157015 CMS_1126 Clavibacter michiganensis subsp. sepedonicus tranport protein YP_001709867.1 1180393 D 31964 CDS YP_001709868.1 170781536 6157016 1181332..1181700 1 NC_010407.1 hypothetical protein 1181700 6157016 CMS_1127 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709868.1 1181332 D 31964 CDS YP_001709869.1 170781537 6157017 complement(1181817..1182713) 1 NC_010407.1 oxidoreductase 1182713 6157017 CMS_1128 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709869.1 1181817 R 31964 CDS YP_001709870.1 170781538 6157018 complement(1182760..1183053) 1 NC_010407.1 hypothetical protein 1183053 6157018 CMS_1129 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709870.1 1182760 R 31964 CDS YP_001709871.1 170781539 6157019 complement(1183050..1183385) 1 NC_010407.1 hypothetical protein 1183385 6157019 CMS_1130 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709871.1 1183050 R 31964 CDS YP_001709872.1 170781540 6157020 complement(1183437..1183592) 1 NC_010407.1 hypothetical protein 1183592 6157020 CMS_1131 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709872.1 1183437 R 31964 CDS YP_001709873.1 170781541 6157021 complement(1183594..1183914) 1 NC_010407.1 hypothetical protein 1183914 6157021 CMS_1132 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709873.1 1183594 R 31964 CDS YP_001709874.1 170781542 6157022 1184118..1185704 1 NC_010407.1 pyridoxal-dependent decarboxylase 1185704 6157022 CMS_1133 Clavibacter michiganensis subsp. sepedonicus pyridoxal-dependent decarboxylase YP_001709874.1 1184118 D 31964 CDS YP_001709875.1 170781543 6157023 1185701..1187083 1 NC_010407.1 monooxygenase 1187083 6157023 CMS_1134 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001709875.1 1185701 D 31964 CDS YP_001709876.1 170781544 6157024 1187080..1189593 1 NC_010407.1 siderophore biosynthesis protein 1189593 6157024 CMS_1135 Clavibacter michiganensis subsp. sepedonicus siderophore biosynthesis protein YP_001709876.1 1187080 D 31964 CDS YP_001709877.1 170781545 6157025 complement(1189681..1190145) 1 NC_010407.1 heat shock protein 1190145 6157025 CMS_1136 Clavibacter michiganensis subsp. sepedonicus heat shock protein YP_001709877.1 1189681 R 31964 CDS YP_001709878.1 170781546 6157026 complement(1190281..1190679) 1 NC_010407.1 hypothetical protein 1190679 6157026 CMS_1137 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709878.1 1190281 R 31964 CDS YP_001709879.1 170781547 6157027 1190761..1191453 1 NC_010407.1 oxidoreductase 1191453 6157027 CMS_1138 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709879.1 1190761 D 31964 CDS YP_001709880.1 170781548 6157028 1191569..1192219 1 NC_010407.1 MarR family transcriptional regulator 1192219 6157028 CMS_1139 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001709880.1 1191569 D 31964 CDS YP_001709881.1 170781549 6157029 1192216..1193160 1 NC_010407.1 hypothetical protein 1193160 NCU06945.1 6157029 NCU06945.1 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709881.1 1192216 D 31964 CDS YP_001709882.1 170781550 6158839 1193299..1194315 1 NC_010407.1 oxidoreductase 1194315 6158839 CMS_1141 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709882.1 1193299 D 31964 CDS YP_001709883.1 170781551 6157030 complement(1194263..1195447) 1 NC_010407.1 hypothetical protein 1195447 6157030 CMS_1142 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709883.1 1194263 R 31964 CDS YP_001709884.1 170781552 6157031 1195521..1197122 1 NC_010407.1 hypothetical protein 1197122 6157031 CMS_1143 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709884.1 1195521 D 31964 CDS YP_001709885.1 170781553 6157032 1197119..1198786 1 NC_010407.1 carboxylesterase 1198786 6157032 CMS_1144 Clavibacter michiganensis subsp. sepedonicus carboxylesterase YP_001709885.1 1197119 D 31964 CDS YP_001709886.1 170781554 6157033 1198854..1200086 1 NC_010407.1 low-affinity phosphate transport protein 1200086 6157033 CMS_1145 Clavibacter michiganensis subsp. sepedonicus low-affinity phosphate transport protein YP_001709886.1 1198854 D 31964 CDS YP_001709887.1 170781555 6157034 1200083..1200334 1 NC_010407.1 hypothetical protein 1200334 6157034 CMS_1146 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709887.1 1200083 D 31964 CDS YP_001709888.1 170781556 6157035 1200456..1201931 1 NC_010407.1 permease 1201931 6157035 CMS_1147 Clavibacter michiganensis subsp. sepedonicus permease YP_001709888.1 1200456 D 31964 CDS YP_001709889.1 170781557 6157036 1202027..1203304 1 NC_010407.1 metal ion transport protein 1203304 6157036 CMS_1148 Clavibacter michiganensis subsp. sepedonicus metal ion transport protein YP_001709889.1 1202027 D 31964 CDS YP_001709890.1 170781558 6157037 complement(1203351..1203866) 1 NC_010407.1 hypothetical protein 1203866 6157037 CMS_1149 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709890.1 1203351 R 31964 CDS YP_001709891.1 170781559 6157038 1204054..1204800 1 NC_010407.1 glycosyl transferase 1204800 6157038 CMS_1150 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001709891.1 1204054 D 31964 CDS YP_001709892.1 170781560 6157039 complement(1204841..1205692) 1 NC_010407.1 hypothetical protein 1205692 6157039 CMS_1151 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709892.1 1204841 R 31964 CDS YP_001709893.1 170781561 6157040 1205798..1207315 1 NC_010407.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 1207315 aspA 6157040 aspA Clavibacter michiganensis subsp. sepedonicus aspartate ammonia-lyase YP_001709893.1 1205798 D 31964 CDS YP_001709894.1 170781562 6158613 complement(1207394..1208395) 1 NC_010407.1 Includes hydrophobic N-terminal region. Contains repetative region, repeat length approx 23 residues.; hypothetical protein 1208395 6158613 CMS_1153 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709894.1 1207394 R 31964 CDS YP_001709895.1 170781563 6157041 complement(1208439..1208576) 1 NC_010407.1 hypothetical protein 1208576 6157041 CMS_1154 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709895.1 1208439 R 31964 CDS YP_001709896.1 170781564 6157042 complement(1208606..1209484) 1 NC_010407.1 hydrolase 1209484 6157042 CMS_1155 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001709896.1 1208606 R 31964 CDS YP_001709897.1 170781565 6157044 1212159..1213178 1 NC_010407.1 hypothetical protein 1213178 6157044 CMS_1158 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709897.1 1212159 D 31964 CDS YP_001709898.1 170781566 6157045 complement(1213195..1214157) 1 NC_010407.1 Nu/C; insertion element IS1121 transposase 1214157 6157045 CMS_1159 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709898.1 1213195 R 31964 CDS YP_001709899.1 170781567 6157046 1214362..1214565 1 NC_010407.1 hypothetical protein 1214565 6157046 CMS_1160 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709899.1 1214362 D 31964 CDS YP_001709900.1 170781568 6157047 complement(1214570..1215493) 1 NC_010407.1 DNA glycosylase 1215493 6157047 CMS_1161 Clavibacter michiganensis subsp. sepedonicus DNA glycosylase YP_001709900.1 1214570 R 31964 CDS YP_001709901.1 170781569 6157048 1215552..1216979 1 NC_010407.1 oxidoreductase 1216979 6157048 CMS_1162 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709901.1 1215552 D 31964 CDS YP_001709902.1 170781570 6157049 1217124..1218308 1 NC_010407.1 hypothetical protein 1218308 6157049 CMS_1163 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709902.1 1217124 D 31964 CDS YP_001709903.1 170781571 6157050 1218442..1218675 1 NC_010407.1 hypothetical protein 1218675 6157050 CMS_1164 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709903.1 1218442 D 31964 CDS YP_001709904.1 170781572 6157051 1218763..1219383 1 NC_010407.1 DNA-invertase 1219383 6157051 CMS_1165 Clavibacter michiganensis subsp. sepedonicus DNA-invertase YP_001709904.1 1218763 D 31964 CDS YP_001709905.1 170781573 6157052 1219575..1220864 1 NC_010407.1 carboxypeptidase 1220864 6157052 CMS_1166 Clavibacter michiganensis subsp. sepedonicus carboxypeptidase YP_001709905.1 1219575 D 31964 CDS YP_001709906.1 170781574 6157053 complement(1220902..1221564) 1 NC_010407.1 two-component response regulator 1221564 6157053 CMS_1167 Clavibacter michiganensis subsp. sepedonicus two-component response regulator YP_001709906.1 1220902 R 31964 CDS YP_001709907.1 170781575 6157054 complement(1221561..1222727) 1 NC_010407.1 two-component system sensor kinase 1222727 6157054 CMS_1168 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001709907.1 1221561 R 31964 CDS YP_001709908.1 170781576 6157055 complement(1222879..1223088) 1 NC_010407.1 hypothetical protein 1223088 6157055 CMS_1169 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709908.1 1222879 R 31964 CDS YP_001709909.1 170781577 6157057 complement(1223996..1224556) 1 NC_010407.1 hypothetical protein 1224556 6157057 CMS_1171 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709909.1 1223996 R 31964 CDS YP_001709910.1 170781578 6157058 1224801..1225703 1 NC_010407.1 hypothetical protein 1225703 6157058 CMS_1172 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709910.1 1224801 D 31964 CDS YP_001709911.1 170781579 6157059 1225788..1226324 1 NC_010407.1 protease 1226324 6157059 CMS_1173 Clavibacter michiganensis subsp. sepedonicus protease YP_001709911.1 1225788 D 31964 CDS YP_001709912.1 170781580 6157060 1226345..1226875 1 NC_010407.1 hypothetical protein 1226875 6157060 CMS_1174 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709912.1 1226345 D 31964 CDS YP_001709913.1 170781581 6157061 1226885..1227487 1 NC_010407.1 signal peptidase 1227487 6157061 CMS_1175 Clavibacter michiganensis subsp. sepedonicus signal peptidase YP_001709913.1 1226885 D 31964 CDS YP_001709914.1 170781582 6157062 1227510..1228343 1 NC_010407.1 2,5-diketo-D-gluconic acid reductase 1228343 6157062 CMS_1176 Clavibacter michiganensis subsp. sepedonicus 2,5-diketo-D-gluconic acid reductase YP_001709914.1 1227510 D 31964 CDS YP_001709915.1 170781583 6157063 complement(1228412..1229134) 1 NC_010407.1 hypothetical protein 1229134 6157063 CMS_1177 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709915.1 1228412 R 31964 CDS YP_001709916.1 170781584 6157064 1229199..1229774 1 NC_010407.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1229774 apt 6157064 apt Clavibacter michiganensis subsp. sepedonicus adenine phosphoribosyltransferase YP_001709916.1 1229199 D 31964 CDS YP_001709917.1 170781585 6158597 complement(1229842..1231107) 1 NC_010407.1 hypothetical protein 1231107 6158597 CMS_1179 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709917.1 1229842 R 31964 CDS YP_001709918.1 170781586 6157065 1231351..1231812 1 NC_010407.1 hypothetical protein 1231812 6157065 CMS_1180 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709918.1 1231351 D 31964 CDS YP_001709919.1 170781587 6157066 1231936..1234218 1 NC_010407.1 hypothetical protein 1234218 6157066 CMS_1181 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709919.1 1231936 D 31964 CDS YP_001709920.1 170781588 6157067 1234405..1235916 1 NC_010407.1 symporter 1235916 6157067 CMS_1182 Clavibacter michiganensis subsp. sepedonicus symporter YP_001709920.1 1234405 D 31964 CDS YP_001709921.1 170781589 6157068 complement(1236202..1236960) 1 NC_010407.1 hypothetical protein 1236960 6157068 CMS_1183 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709921.1 1236202 R 31964 CDS YP_001709922.1 170781590 6157069 complement(1236957..1238345) 1 NC_010407.1 transport protein 1238345 6157069 CMS_1184 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001709922.1 1236957 R 31964 CDS YP_001709923.1 170781591 6157070 1238513..1238782 1 NC_010407.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1238782 rpsO 6157070 rpsO Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S15 YP_001709923.1 1238513 D 31964 CDS YP_001709924.1 170781592 6157071 1239259..1241532 1 NC_010407.1 polynucleotide phosphorylase 1241532 6157071 CMS_1186 Clavibacter michiganensis subsp. sepedonicus polynucleotide phosphorylase YP_001709924.1 1239259 D 31964 CDS YP_001709925.1 170781593 6157072 complement(1241602..1241982) 1 NC_010407.1 hypothetical protein 1241982 6157072 CMS_1187 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709925.1 1241602 R 31964 CDS YP_001709926.1 170781594 6157073 complement(1242005..1242535) 1 NC_010407.1 hypothetical protein 1242535 6157073 CMS_1188 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709926.1 1242005 R 31964 CDS YP_001709927.1 170781595 6157074 1242946..1244085 1 NC_010407.1 oxidoreductase 1244085 6157074 CMS_1189 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001709927.1 1242946 D 31964 CDS YP_001709928.1 170781596 6157075 1244361..1244801 1 NC_010407.1 hypothetical protein 1244801 6157075 CMS_1190 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709928.1 1244361 D 31964 CDS YP_001709929.1 170781597 6157076 1244798..1245712 1 NC_010407.1 hypothetical protein 1245712 6157076 CMS_1191 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709929.1 1244798 D 31964 CDS YP_001709930.1 170781598 6157077 1245767..1247131 1 NC_010407.1 protease 1247131 6157077 CMS_1192 Clavibacter michiganensis subsp. sepedonicus protease YP_001709930.1 1245767 D 31964 CDS YP_001709931.1 170781599 6157078 1247140..1247742 1 NC_010407.1 phosphoglycerate mutase 1247742 6157078 CMS_1193 Clavibacter michiganensis subsp. sepedonicus phosphoglycerate mutase YP_001709931.1 1247140 D 31964 CDS YP_001709932.1 170781600 6157079 1247801..1248634 1 NC_010407.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1248634 6157079 CMS_1194 Clavibacter michiganensis subsp. sepedonicus dihydrodipicolinate reductase YP_001709932.1 1247801 D 31964 CDS YP_001709933.1 170781601 6157080 1248634..1249083 1 NC_010407.1 hypothetical protein 1249083 6157080 CMS_1195 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709933.1 1248634 D 31964 CDS YP_001709934.1 170781602 6157081 complement(1249133..1250053) 1 NC_010407.1 hypothetical protein 1250053 6157081 CMS_1196 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709934.1 1249133 R 31964 CDS YP_001709935.1 170781603 6157082 1250150..1250941 1 NC_010407.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 1250941 thyX 6157082 thyX Clavibacter michiganensis subsp. sepedonicus FAD-dependent thymidylate synthase YP_001709935.1 1250150 D 31964 CDS YP_001709936.1 170781604 6157083 1250976..1251959 1 NC_010407.1 dihydrodipicolinate synthase 1251959 6157083 CMS_1198 Clavibacter michiganensis subsp. sepedonicus dihydrodipicolinate synthase YP_001709936.1 1250976 D 31964 CDS YP_001709937.1 170781605 6157084 1252019..1253701 1 NC_010407.1 hypothetical protein 1253701 6157084 CMS_1199 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709937.1 1252019 D 31964 CDS YP_001709938.1 170781606 6157086 1254938..1255645 1 NC_010407.1 ABC transporter ATP-binding protein 1255645 6157086 CMS_1201 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001709938.1 1254938 D 31964 CDS YP_001709939.1 170781607 6157087 1255642..1256874 1 NC_010407.1 hypothetical protein 1256874 6157087 CMS_1202 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709939.1 1255642 D 31964 CDS YP_001709940.1 170781608 6157088 1256874..1259789 1 NC_010407.1 cell division protein/DNA translocase FtsK 1259789 ftsK 6157088 ftsK Clavibacter michiganensis subsp. sepedonicus cell division protein/DNA translocase FtsK YP_001709940.1 1256874 D 31964 CDS YP_001709941.1 170781609 6158697 1259793..1260422 1 NC_010407.1 phosphatidylglycerophosphate synthase 1260422 6158697 CMS_1204 Clavibacter michiganensis subsp. sepedonicus phosphatidylglycerophosphate synthase YP_001709941.1 1259793 D 31964 CDS YP_001709942.1 170781610 6157089 1260419..1260940 1 NC_010407.1 hypothetical protein 1260940 6157089 CMS_1205 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709942.1 1260419 D 31964 CDS YP_001709943.1 170781611 6157090 1261080..1261388 1 NC_010407.1 DNA-binding protein 1261388 6157090 CMS_1206 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001709943.1 1261080 D 31964 CDS YP_001709944.1 170781612 6157091 1261465..1261698 1 NC_010407.1 hypothetical protein 1261698 6157091 CMS_1207 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709944.1 1261465 D 31964 CDS YP_001709945.1 170781613 6157092 1261836..1263053 1 NC_010407.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1263053 recA 6157092 recA Clavibacter michiganensis subsp. sepedonicus recombinase A YP_001709945.1 1261836 D 31964 CDS YP_001709946.1 170781614 6158921 1263288..1264223 1 NC_010407.1 regulatory protein 1264223 recX 6158921 recX Clavibacter michiganensis subsp. sepedonicus regulatory protein YP_001709946.1 1263288 D 31964 CDS YP_001709947.1 170781615 6158927 1264274..1265866 1 NC_010407.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1265866 6158927 CMS_1210 Clavibacter michiganensis subsp. sepedonicus (dimethylallyl)adenosine tRNA methylthiotransferase YP_001709947.1 1264274 D 31964 CDS YP_001709948.1 170781616 6157093 1265863..1266786 1 NC_010407.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1266786 miaA 6157093 miaA Clavibacter michiganensis subsp. sepedonicus tRNA delta(2)-isopentenylpyrophosphate transferase YP_001709948.1 1265863 D 31964 CDS YP_001709949.1 170781617 6157094 1266796..1267674 1 NC_010407.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1267674 dapF 6157094 dapF Clavibacter michiganensis subsp. sepedonicus diaminopimelate epimerase YP_001709949.1 1266796 D 31964 CDS YP_001709950.1 170781618 6157095 complement(1267748..1268365) 1 NC_010407.1 hypothetical protein 1268365 6157095 CMS_1213 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709950.1 1267748 R 31964 CDS YP_001709951.1 170781619 6157096 1268407..1269972 1 NC_010407.1 GTP-binding protein 1269972 6157096 CMS_1214 Clavibacter michiganensis subsp. sepedonicus GTP-binding protein YP_001709951.1 1268407 D 31964 CDS YP_001709952.1 170781620 6157097 complement(1270046..1270726) 1 NC_010407.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 1270726 lexA 6157097 lexA Clavibacter michiganensis subsp. sepedonicus LexA repressor YP_001709952.1 1270046 R 31964 CDS YP_001709953.1 170781621 6158789 1271174..1271491 1 NC_010407.1 hypothetical protein 1271491 6158789 CMS_1215A Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709953.1 1271174 D 31964 CDS YP_001709954.1 170781622 6157098 1271593..1272201 1 NC_010407.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1272201 hisB 6157098 hisB Clavibacter michiganensis subsp. sepedonicus imidazoleglycerol-phosphate dehydratase YP_001709954.1 1271593 D 31964 CDS YP_001709955.1 170781623 6158749 1272198..1272839 1 NC_010407.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1272839 hisH 6158749 hisH Clavibacter michiganensis subsp. sepedonicus imidazole glycerol phosphate synthase subunit HisH YP_001709955.1 1272198 D 31964 CDS YP_001709956.1 170781624 6158755 1272904..1273653 1 NC_010407.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; phosphoribosyl isomerase A 1273653 priA 6158755 priA Clavibacter michiganensis subsp. sepedonicus phosphoribosyl isomerase A YP_001709956.1 1272904 D 31964 CDS YP_001709957.1 170781625 6158880 1273650..1274417 1 NC_010407.1 hypothetical protein 1274417 6158880 CMS_1219 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709957.1 1273650 D 31964 CDS YP_001709958.1 170781626 6157099 complement(1274511..1274969) 1 NC_010407.1 hypothetical protein 1274969 6157099 CMS_1220 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709958.1 1274511 R 31964 CDS YP_001709959.1 170781627 6157100 1275525..1275956 1 NC_010407.1 translation initiation factor IF-3 1275956 infC 6157100 infC Clavibacter michiganensis subsp. sepedonicus translation initiation factor IF-3 YP_001709959.1 1275525 D 31964 CDS YP_001709960.1 170781628 6158772 1275949..1276143 1 NC_010407.1 50S ribosomal protein L35 1276143 rpmI 6158772 rpmI Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L35 YP_001709960.1 1275949 D 31964 CDS YP_001709961.1 170781629 6158960 1276190..1276582 1 NC_010407.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1276582 rplT 6158960 rplT Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L20 YP_001709961.1 1276190 D 31964 CDS YP_001709962.1 170781630 6158950 1276646..1277446 1 NC_010407.1 rRNA methylase 1277446 6158950 CMS_1224 Clavibacter michiganensis subsp. sepedonicus rRNA methylase YP_001709962.1 1276646 D 31964 CDS YP_001709963.1 170781631 6157101 1277598..1278386 1 NC_010407.1 glutamate/aspartate uptake system ATP-binding protein 1278386 6157101 CMS_1225 Clavibacter michiganensis subsp. sepedonicus glutamate/aspartate uptake system ATP-binding protein YP_001709963.1 1277598 D 31964 CDS YP_001709964.1 170781632 6157102 1278478..1279470 1 NC_010407.1 glutamate/aspartate-binding transport protein 1279470 6157102 CMS_1226 Clavibacter michiganensis subsp. sepedonicus glutamate/aspartate-binding transport protein YP_001709964.1 1278478 D 31964 CDS YP_001709965.1 170781633 6157103 1279586..1280233 1 NC_010407.1 glutamate permease 1280233 6157103 CMS_1227 Clavibacter michiganensis subsp. sepedonicus glutamate permease YP_001709965.1 1279586 D 31964 CDS YP_001709966.1 170781634 6157104 1280230..1281054 1 NC_010407.1 glutamate permease 1281054 6157104 CMS_1228 Clavibacter michiganensis subsp. sepedonicus glutamate permease YP_001709966.1 1280230 D 31964 CDS YP_001709967.1 170781635 6157105 1281129..1282166 1 NC_010407.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1282166 pheS 6157105 pheS Clavibacter michiganensis subsp. sepedonicus phenylalanyl-tRNA synthetase subunit alpha YP_001709967.1 1281129 D 31964 CDS YP_001709968.1 170781636 6158865 1282169..1284712 1 NC_010407.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1284712 pheT 6158865 pheT Clavibacter michiganensis subsp. sepedonicus phenylalanyl-tRNA synthetase subunit beta YP_001709968.1 1282169 D 31964 CDS YP_001709969.1 170781637 6158866 1284829..1285878 1 NC_010407.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1285878 argC 6158866 argC Clavibacter michiganensis subsp. sepedonicus N-acetyl-gamma-glutamyl-phosphate reductase YP_001709969.1 1284829 D 31964 CDS YP_001709970.1 170781638 6158602 1285875..1287029 1 NC_010407.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1287029 argJ 6158602 argJ Clavibacter michiganensis subsp. sepedonicus bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_001709970.1 1285875 D 31964 CDS YP_001709971.1 170781639 6158607 1287029..1287964 1 NC_010407.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1287964 argB 6158607 argB Clavibacter michiganensis subsp. sepedonicus acetylglutamate kinase YP_001709971.1 1287029 D 31964 CDS YP_001709972.1 170781640 6158601 1287961..1289178 1 NC_010407.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1289178 argD 6158601 argD Clavibacter michiganensis subsp. sepedonicus acetylornithine aminotransferase YP_001709972.1 1287961 D 31964 CDS YP_001709973.1 170781641 6158603 1289326..1290249 1 NC_010407.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1290249 argF 6158603 argF Clavibacter michiganensis subsp. sepedonicus ornithine carbamoyltransferase YP_001709973.1 1289326 D 31964 CDS YP_001709974.1 170781642 6158604 1290298..1291551 1 NC_010407.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1291551 argG 6158604 argG Clavibacter michiganensis subsp. sepedonicus argininosuccinate synthase YP_001709974.1 1290298 D 31964 CDS YP_001709975.1 170781643 6158605 1291556..1293037 1 NC_010407.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1293037 argH 6158605 argH Clavibacter michiganensis subsp. sepedonicus argininosuccinate lyase YP_001709975.1 1291556 D 31964 CDS YP_001709976.1 170781644 6158606 1293034..1293171 1 NC_010407.1 hypothetical protein 1293171 6158606 CMS_1238 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709976.1 1293034 D 31964 CDS YP_001709977.1 170781645 6157106 1293179..1293793 1 NC_010407.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1293793 6157106 CMS_1239 Clavibacter michiganensis subsp. sepedonicus 3-methyladenine DNA glycosylase YP_001709977.1 1293179 D 31964 CDS YP_001709978.1 170781646 6157107 complement(1293812..1294411) 1 NC_010407.1 hypothetical protein 1294411 6157107 CMS_1240 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709978.1 1293812 R 31964 CDS YP_001709979.1 170781647 6157108 complement(1294408..1295079) 1 NC_010407.1 DNA-binding protein 1295079 6157108 CMS_1241 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001709979.1 1294408 R 31964 CDS YP_001709980.1 170781648 6157109 1295298..1296626 1 NC_010407.1 tyrosyl-tRNA synthetase 1296626 tyrS 6157109 tyrS Clavibacter michiganensis subsp. sepedonicus tyrosyl-tRNA synthetase YP_001709980.1 1295298 D 31964 CDS YP_001709981.1 170781649 6159110 1303366..1304664 1 NC_010407.1 hypothetical protein 1304664 6159110 CMS_1243 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709981.1 1303366 D 31964 CDS YP_001709982.1 170781650 6157110 1304654..1305694 1 NC_010407.1 HMMPfam:PF00702;Haloacid dehalogenase-like hydrolase; hypothetical protein 1305694 6157110 CMS_1244 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709982.1 1304654 D 31964 CDS YP_001709983.1 170781651 6157111 1305704..1305931 1 NC_010407.1 hypothetical protein 1305931 6157111 CMS_1245 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709983.1 1305704 D 31964 CDS YP_001709984.1 170781652 6157112 1305924..1306796 1 NC_010407.1 low similarity to PF01728;Ribosomal RNA methyltransferase RrmJ/FtsJ, none to hemolysin; hypothetical protein 1306796 6157112 CMS_1246 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709984.1 1305924 D 31964 CDS YP_001709985.1 170781653 6157113 1306793..1307719 1 NC_010407.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1307719 ppnK 6157113 ppnK Clavibacter michiganensis subsp. sepedonicus inorganic polyphosphate/ATP-NAD kinase YP_001709985.1 1306793 D 31964 CDS YP_001709986.1 170781654 6158876 1307712..1309427 1 NC_010407.1 DNA repair protein RecN 1309427 recN 6158876 recN Clavibacter michiganensis subsp. sepedonicus DNA repair protein RecN YP_001709986.1 1307712 D 31964 CDS YP_001709987.1 170781655 6158923 1309501..1311243 1 NC_010407.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1311243 pyrG 6158923 pyrG Clavibacter michiganensis subsp. sepedonicus CTP synthetase YP_001709987.1 1309501 D 31964 CDS YP_001709988.1 170781656 6158912 1311240..1311941 1 NC_010407.1 nudix hydrolase 1311941 6158912 CMS_1250 Clavibacter michiganensis subsp. sepedonicus nudix hydrolase YP_001709988.1 1311240 D 31964 CDS YP_001709989.1 170781657 6157114 1311938..1312924 1 NC_010407.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1312924 xerD 6157114 xerD Clavibacter michiganensis subsp. sepedonicus site-specific tyrosine recombinase XerD YP_001709989.1 1311938 D 31964 CDS YP_001709990.1 170781658 6157115 1312997..1313881 1 NC_010407.1 chromosome partitioning protein 1313881 parA 6157115 parA Clavibacter michiganensis subsp. sepedonicus chromosome partitioning protein YP_001709990.1 1312997 D 31964 CDS YP_001709991.1 170781659 6158848 1313865..1314731 1 NC_010407.1 hypothetical protein 1314731 6158848 CMS_1253 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709991.1 1313865 D 31964 CDS YP_001709992.1 170781660 6157116 1314721..1315332 1 NC_010407.1 hypothetical protein 1315332 6157116 CMS_1254 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001709992.1 1314721 D 31964 CDS YP_001709993.1 170781661 6157117 1315316..1316191 1 NC_010407.1 RNA pseudouridine synthase 1316191 rsuA 6157117 rsuA Clavibacter michiganensis subsp. sepedonicus RNA pseudouridine synthase YP_001709993.1 1315316 D 31964 CDS YP_001709994.1 170781662 6158972 1316188..1317306 1 NC_010407.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 1317306 6158972 CMS_1256 Clavibacter michiganensis subsp. sepedonicus prephenate dehydrogenase YP_001709994.1 1316188 D 31964 CDS YP_001709995.1 170781663 6157118 1317435..1318046 1 NC_010407.1 cytidylate kinase 1318046 cmk 6157118 cmk Clavibacter michiganensis subsp. sepedonicus cytidylate kinase YP_001709995.1 1317435 D 31964 CDS YP_001709996.1 170781664 6158637 1318087..1319595 1 NC_010407.1 synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1319595 engA 6158637 engA Clavibacter michiganensis subsp. sepedonicus GTP-binding protein EngA YP_001709996.1 1318087 D 31964 CDS YP_001709997.1 170781665 6157119 complement(1319606..1320568) 1 NC_010407.1 N/C pat1; insertion element IS1121 transposase 1320568 6157119 CMS_1259 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001709997.1 1319606 R 31964 CDS YP_001709998.1 170781666 6157120 complement(1320739..1321722) 1 NC_010407.1 possible serine protease with a serine active site; pat-1-like protein 1321722 6157120 CMS_1260 Clavibacter michiganensis subsp. sepedonicus pat-1-like protein YP_001709998.1 1320739 R 31964 CDS YP_001709999.1 170781667 6157121 complement(1321819..1323216) 1 NC_010407.1 monooxygenase 1323216 6157121 CMS_1261 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001709999.1 1321819 R 31964 CDS YP_001710000.1 170781668 6157122 complement(1323343..1324116) 1 NC_010407.1 possible serine protease, contains both a serine and a histidine active site, probably secreted; serine protease 1324116 6157122 CMS_1262 Clavibacter michiganensis subsp. sepedonicus serine protease YP_001710000.1 1323343 R 31964 CDS YP_001710001.1 170781669 6157123 1324473..1325012 1 NC_010407.1 hypothetical protein 1325012 6157123 CMS_1263 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710001.1 1324473 D 31964 CDS YP_001710002.1 170781670 6159056 1325455..1326645 1 NC_010407.1 DNA-binding protein 1326645 6159056 CMS_1264 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710002.1 1325455 D 31964 CDS YP_001710003.1 170781671 6157125 complement(1326981..1327235) 1 NC_010407.1 hypothetical protein 1327235 6157125 CMS_1265 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710003.1 1326981 R 31964 CDS YP_001710004.1 170781672 6157126 1327342..1328643 1 NC_010407.1 hypothetical protein 1328643 6157126 CMS_1266 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710004.1 1327342 D 31964 CDS YP_001710005.1 170781673 6157127 complement(1328651..1330306) 1 NC_010407.1 hypothetical protein 1330306 6157127 CMS_1267 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710005.1 1328651 R 31964 CDS YP_001710006.1 170781674 6157128 complement(1330350..1331876) 1 NC_010407.1 hypothetical protein 1331876 6157128 CMS_1268 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710006.1 1330350 R 31964 CDS YP_001710007.1 170781675 6157129 complement(1331997..1332458) 1 NC_010407.1 acetyltransferase 1332458 6157129 CMS_1269 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001710007.1 1331997 R 31964 CDS YP_001710008.1 170781676 6157130 1332703..1334355 1 NC_010407.1 solute-binding transport protein 1334355 6157130 CMS_1270 Clavibacter michiganensis subsp. sepedonicus solute-binding transport protein YP_001710008.1 1332703 D 31964 CDS YP_001710009.1 170781677 6157131 1334393..1335331 1 NC_010407.1 transport protein 1335331 6157131 CMS_1271 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710009.1 1334393 D 31964 CDS YP_001710010.1 170781678 6157132 1335328..1336176 1 NC_010407.1 transport protein 1336176 6157132 CMS_1272 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710010.1 1335328 D 31964 CDS YP_001710011.1 170781679 6157134 1337867..1338940 1 NC_010407.1 monooxygenase 1338940 6157134 CMS_1275 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001710011.1 1337867 D 31964 CDS YP_001710012.1 170781680 6157135 1338937..1339605 1 NC_010407.1 hypothetical protein 1339605 6157135 CMS_1276 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710012.1 1338937 D 31964 CDS YP_001710013.1 170781681 6157136 1339602..1340234 1 NC_010407.1 hypothetical protein 1340234 6157136 CMS_1277 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710013.1 1339602 D 31964 CDS YP_001710014.1 170781682 6157137 1340231..1340845 1 NC_010407.1 hypothetical protein 1340845 6157137 CMS_1278 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710014.1 1340231 D 31964 CDS YP_001710015.1 170781683 6157138 complement(1340917..1341945) 1 NC_010407.1 hypothetical protein 1341945 6157138 CMS_1279 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710015.1 1340917 R 31964 CDS YP_001710016.1 170781684 6157139 complement(1342081..1343601) 1 NC_010407.1 transport protein 1343601 6157139 CMS_1280 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710016.1 1342081 R 31964 CDS YP_001710017.1 170781685 6157140 1343745..1345115 1 NC_010407.1 monooxygenase 1345115 6157140 CMS_1281 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001710017.1 1343745 D 31964 CDS YP_001710018.1 170781686 6157141 1345112..1346350 1 NC_010407.1 dioxygenase 1346350 6157141 CMS_1282 Clavibacter michiganensis subsp. sepedonicus dioxygenase YP_001710018.1 1345112 D 31964 CDS YP_001710019.1 170781687 6157142 complement(1346607..1347638) 1 NC_010407.1 hypothetical protein 1347638 6157142 CMS_1283 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710019.1 1346607 R 31964 CDS YP_001710020.1 170781688 6157143 1347750..1348223 1 NC_010407.1 hypothetical protein 1348223 6157143 CMS_1284 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710020.1 1347750 D 31964 CDS YP_001710021.1 170781689 6157145 complement(1349904..1350521) 1 NC_010407.1 hypothetical protein 1350521 6157145 CMS_1287 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710021.1 1349904 R 31964 CDS YP_001710022.1 170781690 6157146 complement(1350598..1351929) 1 NC_010407.1 two-component sensor kinase 1351929 6157146 CMS_1288 Clavibacter michiganensis subsp. sepedonicus two-component sensor kinase YP_001710022.1 1350598 R 31964 CDS YP_001710023.1 170781691 6157148 complement(1352652..1354256) 1 NC_010407.1 hypothetical protein 1354256 6157148 CMS_1290 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710023.1 1352652 R 31964 CDS YP_001710024.1 170781692 6157150 complement(1355547..1356206) 1 NC_010407.1 hypothetical protein 1356206 6157150 CMS_1293 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710024.1 1355547 R 31964 CDS YP_001710025.1 170781693 6157151 complement(1356258..1356878) 1 NC_010407.1 nudix hydrolase 1356878 6157151 CMS_1294 Clavibacter michiganensis subsp. sepedonicus nudix hydrolase YP_001710025.1 1356258 R 31964 CDS YP_001710026.1 170781694 6157152 1357004..1357351 1 NC_010407.1 transcriptional regulator 1357351 6157152 CMS_1295 Clavibacter michiganensis subsp. sepedonicus transcriptional regulator YP_001710026.1 1357004 D 31964 CDS YP_001710027.1 170781695 6157153 complement(1357410..1358246) 1 NC_010407.1 non-heme haloperoxidase 1358246 6157153 CMS_1296 Clavibacter michiganensis subsp. sepedonicus non-heme haloperoxidase YP_001710027.1 1357410 R 31964 CDS YP_001710028.1 170781696 6157154 1358422..1360086 1 NC_010407.1 acetyl-coenzyme A synthetase 1360086 6157154 CMS_1297 Clavibacter michiganensis subsp. sepedonicus acetyl-coenzyme A synthetase YP_001710028.1 1358422 D 31964 CDS YP_001710029.1 170781697 6157155 1360212..1360880 1 NC_010407.1 transcriptional repressor 1360880 6157155 CMS_1298 Clavibacter michiganensis subsp. sepedonicus transcriptional repressor YP_001710029.1 1360212 D 31964 CDS YP_001710030.1 170781698 6157156 1360877..1362442 1 NC_010407.1 hypothetical protein 1362442 6157156 CMS_1299 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710030.1 1360877 D 31964 CDS YP_001710031.1 170781699 6157157 1362483..1363511 1 NC_010407.1 oxidoreductase 1363511 6157157 CMS_1300 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710031.1 1362483 D 31964 CDS YP_001710032.1 170781700 6157158 complement(1363603..1363899) 1 NC_010407.1 hypothetical protein 1363899 6157158 CMS_1301 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710032.1 1363603 R 31964 CDS YP_001710033.1 170781701 6157159 complement(1364055..1364744) 1 NC_010407.1 hypothetical protein 1364744 6157159 CMS_1302 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710033.1 1364055 R 31964 CDS YP_001710034.1 170781702 6157160 complement(1364741..1365556) 1 NC_010407.1 hypothetical protein 1365556 6157160 CMS_1303 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710034.1 1364741 R 31964 CDS YP_001710035.1 170781703 6157161 complement(1365672..1366700) 1 NC_010407.1 monooxygenase 1366700 6157161 CMS_1304 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001710035.1 1365672 R 31964 CDS YP_001710036.1 170781704 6157162 complement(1366790..1368274) 1 NC_010407.1 transport protein 1368274 6157162 CMS_1305 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710036.1 1366790 R 31964 CDS YP_001710037.1 170781705 6157163 1368435..1370141 1 NC_010407.1 gamma-glutamyltransferase 1370141 6157163 CMS_1306 Clavibacter michiganensis subsp. sepedonicus gamma-glutamyltransferase YP_001710037.1 1368435 D 31964 CDS YP_001710038.1 170781706 6157164 1370138..1370671 1 NC_010407.1 hypothetical protein 1370671 6157164 CMS_1307 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710038.1 1370138 D 31964 CDS YP_001710039.1 170781707 6157166 1371403..1371771 1 NC_010407.1 hypothetical protein 1371771 6157166 CMS_1310 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710039.1 1371403 D 31964 CDS YP_001710040.1 170781708 6157167 1371768..1372517 1 NC_010407.1 phosphatase 1372517 6157167 CMS_1311 Clavibacter michiganensis subsp. sepedonicus phosphatase YP_001710040.1 1371768 D 31964 CDS YP_001710041.1 170781709 6157168 complement(1372530..1373990) 1 NC_010407.1 guanine deaminase 1373990 6157168 CMS_1312 Clavibacter michiganensis subsp. sepedonicus guanine deaminase YP_001710041.1 1372530 R 31964 CDS YP_001710042.1 170781710 6157169 complement(1374201..1374854) 1 NC_010407.1 hypothetical protein 1374854 6157169 CMS_1313 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710042.1 1374201 R 31964 CDS YP_001710043.1 170781711 6157170 complement(1374868..1375446) 1 NC_010407.1 hypothetical protein 1375446 6157170 CMS_1314 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710043.1 1374868 R 31964 CDS YP_001710044.1 170781712 6157171 complement(1375548..1376183) 1 NC_010407.1 hypothetical protein 1376183 6157171 CMS_1315 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710044.1 1375548 R 31964 CDS YP_001710045.1 170781713 6157172 1376271..1377488 1 NC_010407.1 hypothetical protein 1377488 6157172 CMS_1316 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710045.1 1376271 D 31964 CDS YP_001710046.1 170781714 6157173 1377485..1378795 1 NC_010407.1 amino acid transporter 1378795 6157173 CMS_1317 Clavibacter michiganensis subsp. sepedonicus amino acid transporter YP_001710046.1 1377485 D 31964 CDS YP_001710047.1 170781715 6157174 complement(1378815..1381709) 1 NC_010407.1 oxidoreductase 1381709 6157174 CMS_1318 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710047.1 1378815 R 31964 CDS YP_001710048.1 170781716 6157175 complement(1381706..1382590) 1 NC_010407.1 oxidoreductase 1382590 6157175 CMS_1319 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710048.1 1381706 R 31964 CDS YP_001710049.1 170781717 6157176 1382791..1383531 1 NC_010407.1 hypothetical protein 1383531 6157176 CMS_1320 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710049.1 1382791 D 31964 CDS YP_001710050.1 170781718 6157177 1383528..1383971 1 NC_010407.1 hypothetical protein 1383971 6157177 CMS_1321 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710050.1 1383528 D 31964 CDS YP_001710051.1 170781719 6157178 1384119..1385828 1 NC_010407.1 Homologs often associated with surface polysaccharide biosynthesis; hypothetical protein 1385828 6157178 CMS_1322 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710051.1 1384119 D 31964 CDS YP_001710052.1 170781720 6157179 1385825..1386808 1 NC_010407.1 hypothetical protein 1386808 6157179 CMS_1323 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710052.1 1385825 D 31964 CDS YP_001710053.1 170781721 6157180 complement(1386916..1387359) 1 NC_010407.1 hypothetical protein 1387359 6157180 CMS_1324 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710053.1 1386916 R 31964 CDS YP_001710054.1 170781722 6157181 1387456..1388433 1 NC_010407.1 hypothetical protein 1388433 6157181 CMS_1325 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710054.1 1387456 D 31964 CDS YP_001710055.1 170781723 6157182 1388531..1389493 1 NC_010407.1 N; insertion element IS1121 transposase 1389493 6157182 CMS_1326 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710055.1 1388531 D 31964 CDS YP_001710056.1 170781724 6157183 complement(1389538..1389975) 1 NC_010407.1 Possible downstream translational start sites.; hypothetical protein 1389975 6157183 CMS_1327 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710056.1 1389538 R 31964 CDS YP_001710057.1 170781725 6157184 1390019..1391512 1 NC_010407.1 oxidoreductase 1391512 6157184 CMS_1328 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710057.1 1390019 D 31964 CDS YP_001710058.1 170781726 6157185 complement(1391562..1393046) 1 NC_010407.1 Contains hydrophilic region.; hypothetical protein 1393046 6157185 CMS_1329 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710058.1 1391562 R 31964 CDS YP_001710059.1 170781727 6157186 1393075..1394169 1 NC_010407.1 oxidoreductase 1394169 6157186 CMS_1330 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710059.1 1393075 D 31964 CDS YP_001710060.1 170781728 6157187 complement(1394210..1394689) 1 NC_010407.1 Contains leucine-rich repeat; hypothetical protein 1394689 6157187 CMS_1331 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710060.1 1394210 R 31964 CDS YP_001710061.1 170781729 6157188 1394730..1395764 1 NC_010407.1 Stop position appears to have been extended by IS insertion.; hypothetical protein 1395764 6157188 CMS_1332 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710061.1 1394730 D 31964 CDS YP_001710062.1 170781730 6157189 complement(1395695..1396657) 1 NC_010407.1 N; insertion element IS1121 transposase 1396657 6157189 CMS_1333 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710062.1 1395695 R 31964 CDS YP_001710063.1 170781731 6157190 complement(1396755..1398392) 1 NC_010407.1 monophosphatase/phosphodiesterase bifunctional enzyme 1398392 6157190 CMS_1334 Clavibacter michiganensis subsp. sepedonicus monophosphatase/phosphodiesterase bifunctional enzyme YP_001710063.1 1396755 R 31964 CDS YP_001710064.1 170781732 6157191 complement(1398389..1399624) 1 NC_010407.1 ABC transporter ATP-binding protein 1399624 6157191 CMS_1335 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001710064.1 1398389 R 31964 CDS YP_001710065.1 170781733 6157192 complement(1399632..1400447) 1 NC_010407.1 inner membrane transport protein 1400447 6157192 CMS_1336 Clavibacter michiganensis subsp. sepedonicus inner membrane transport protein YP_001710065.1 1399632 R 31964 CDS YP_001710066.1 170781734 6157193 complement(1400447..1401277) 1 NC_010407.1 inner membrane transport protein 1401277 6157193 CMS_1337 Clavibacter michiganensis subsp. sepedonicus inner membrane transport protein YP_001710066.1 1400447 R 31964 CDS YP_001710067.1 170781735 6157194 complement(1401397..1402563) 1 NC_010407.1 substrate-binding transport protein 1402563 6157194 CMS_1338 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001710067.1 1401397 R 31964 CDS YP_001710068.1 170781736 6157196 complement(1403796..1404614) 1 NC_010407.1 hypothetical protein 1404614 6157196 CMS_1341 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710068.1 1403796 R 31964 CDS YP_001710069.1 170781737 6157197 complement(1404653..1404934) 1 NC_010407.1 hypothetical protein 1404934 6157197 CMS_1342 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710069.1 1404653 R 31964 CDS YP_001710070.1 170781738 6157198 complement(1404935..1405981) 1 NC_010407.1 metalloprotease 1405981 6157198 CMS_1343 Clavibacter michiganensis subsp. sepedonicus metalloprotease YP_001710070.1 1404935 R 31964 CDS YP_001710071.1 170781739 6157199 complement(1406075..1406797) 1 NC_010407.1 two-component response regulator 1406797 6157199 CMS_1344 Clavibacter michiganensis subsp. sepedonicus two-component response regulator YP_001710071.1 1406075 R 31964 CDS YP_001710072.1 170781740 6157200 complement(1406794..1408506) 1 NC_010407.1 two-component sensor kinase 1408506 6157200 CMS_1345 Clavibacter michiganensis subsp. sepedonicus two-component sensor kinase YP_001710072.1 1406794 R 31964 CDS YP_001710073.1 170781741 6157201 1408714..1410099 1 NC_010407.1 sodium:dicarboxylate symporter 1410099 6157201 CMS_1346 Clavibacter michiganensis subsp. sepedonicus sodium:dicarboxylate symporter YP_001710073.1 1408714 D 31964 CDS YP_001710074.1 170781742 6157202 1410188..1410670 1 NC_010407.1 hypothetical protein 1410670 6157202 CMS_1347 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710074.1 1410188 D 31964 CDS YP_001710075.1 170781743 6157203 1410670..1411371 1 NC_010407.1 MerR family transcriptional regulator 1411371 6157203 CMS_1348 Clavibacter michiganensis subsp. sepedonicus MerR family transcriptional regulator YP_001710075.1 1410670 D 31964 CDS YP_001710076.1 170781744 6157204 1411624..1412181 1 NC_010407.1 hypothetical protein 1412181 6157204 CMS_1349 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710076.1 1411624 D 31964 CDS YP_001710077.1 170781745 6157205 complement(1412377..1413153) 1 NC_010407.1 chromosome partitioning protein 1413153 6157205 CMS_1350 Clavibacter michiganensis subsp. sepedonicus chromosome partitioning protein YP_001710077.1 1412377 R 31964 CDS YP_001710078.1 170781746 6157206 1413268..1416669 1 NC_010407.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1416669 pyc 6157206 pyc Clavibacter michiganensis subsp. sepedonicus pyruvate carboxylase YP_001710078.1 1413268 D 31964 CDS YP_001710079.1 170781747 6158905 1416673..1418145 1 NC_010407.1 nucleotide-disulfide oxidoreductase 1418145 6158905 CMS_1352 Clavibacter michiganensis subsp. sepedonicus nucleotide-disulfide oxidoreductase YP_001710079.1 1416673 D 31964 CDS YP_001710080.1 170781748 6157207 1418180..1418671 1 NC_010407.1 peptide deformylase 1418671 6157207 CMS_1353 Clavibacter michiganensis subsp. sepedonicus peptide deformylase YP_001710080.1 1418180 D 31964 CDS YP_001710081.1 170781749 6157208 complement(1418715..1420541) 1 NC_010407.1 long chain fatty acid CoA ligase 1420541 6157208 CMS_1354 Clavibacter michiganensis subsp. sepedonicus long chain fatty acid CoA ligase YP_001710081.1 1418715 R 31964 CDS YP_001710082.1 170781750 6157209 1420674..1421639 1 NC_010407.1 ROK family regulator 1421639 6157209 CMS_1355 Clavibacter michiganensis subsp. sepedonicus ROK family regulator YP_001710082.1 1420674 D 31964 CDS YP_001710083.1 170781751 6157210 1421720..1422409 1 NC_010407.1 phospholipid/glycerol acyltransferase 1422409 6157210 CMS_1356 Clavibacter michiganensis subsp. sepedonicus phospholipid/glycerol acyltransferase YP_001710083.1 1421720 D 31964 CDS YP_001710084.1 170781752 6157211 1422469..1423839 1 NC_010407.1 phospho-2-dehydro-3-deoxyheptonate aldolase 1423839 aroH 6157211 aroH Clavibacter michiganensis subsp. sepedonicus phospho-2-dehydro-3-deoxyheptonate aldolase YP_001710084.1 1422469 D 31964 CDS YP_001710085.1 170781753 6158610 1424001..1425293 1 NC_010407.1 N; insertion element ISCmi3 transposase 1425293 6158610 CMS_1358 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi3 transposase YP_001710085.1 1424001 D 31964 CDS YP_001710086.1 170781754 6157212 complement(1425369..1427294) 1 NC_010407.1 serine/threonine protein kinase 1427294 6157212 CMS_1359 Clavibacter michiganensis subsp. sepedonicus serine/threonine protein kinase YP_001710086.1 1425369 R 31964 CDS YP_001710087.1 170781755 6157213 complement(1427401..1428681) 1 NC_010407.1 peptidoglycan-binding protein 1428681 6157213 CMS_1360 Clavibacter michiganensis subsp. sepedonicus peptidoglycan-binding protein YP_001710087.1 1427401 R 31964 CDS YP_001710088.1 170781756 6157214 1428924..1429235 1 NC_010407.1 DNA-binding protein 1429235 6157214 CMS_1361 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710088.1 1428924 D 31964 CDS YP_001710089.1 170781757 6157215 complement(1429288..1430409) 1 NC_010407.1 polyprenyl synthetase 1430409 6157215 CMS_1362 Clavibacter michiganensis subsp. sepedonicus polyprenyl synthetase YP_001710089.1 1429288 R 31964 CDS YP_001710090.1 170781758 6157216 1430487..1430882 1 NC_010407.1 hypothetical protein 1430882 6157216 CMS_1363 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710090.1 1430487 D 31964 CDS YP_001710091.1 170781759 6157217 1431221..1431652 1 NC_010407.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1431652 mraZ 6157217 mraZ Clavibacter michiganensis subsp. sepedonicus cell division protein MraZ YP_001710091.1 1431221 D 31964 CDS YP_001710092.1 170781760 6158823 1431756..1432712 1 NC_010407.1 S-adenosyl-methyltransferase MraW 1432712 mraW 6158823 mraW Clavibacter michiganensis subsp. sepedonicus S-adenosyl-methyltransferase MraW YP_001710092.1 1431756 D 31964 CDS YP_001710093.1 170781761 6158821 1432709..1433383 1 NC_010407.1 hypothetical protein 1433383 6158821 CMS_1366 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710093.1 1432709 D 31964 CDS YP_001710094.1 170781762 6157218 1433548..1435257 1 NC_010407.1 penicillin binding protein 1435257 6157218 CMS_1367 Clavibacter michiganensis subsp. sepedonicus penicillin binding protein YP_001710094.1 1433548 D 31964 CDS YP_001710095.1 170781763 6157219 1435270..1436814 1 NC_010407.1 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1436814 murE 6157219 murE Clavibacter michiganensis subsp. sepedonicus UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001710095.1 1435270 D 31964 CDS YP_001710096.1 170781764 6158832 1436771..1438225 1 NC_010407.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1438225 murF 6158832 murF Clavibacter michiganensis subsp. sepedonicus UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_001710096.1 1436771 D 31964 CDS YP_001710097.1 170781765 6158833 1438219..1439328 1 NC_010407.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1439328 mraY 6158833 mraY Clavibacter michiganensis subsp. sepedonicus phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001710097.1 1438219 D 31964 CDS YP_001710098.1 170781766 6158822 1439331..1440875 1 NC_010407.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1440875 murD 6158822 murD Clavibacter michiganensis subsp. sepedonicus UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001710098.1 1439331 D 31964 CDS YP_001710099.1 170781767 6158831 1440832..1442121 1 NC_010407.1 cell division protein FtsW 1442121 ftsW 6158831 ftsW Clavibacter michiganensis subsp. sepedonicus cell division protein FtsW YP_001710099.1 1440832 D 31964 CDS YP_001710100.1 170781768 6158699 1442118..1443221 1 NC_010407.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1443221 murG 6158699 murG Clavibacter michiganensis subsp. sepedonicus undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001710100.1 1442118 D 31964 CDS YP_001710101.1 170781769 6158834 1443269..1444699 1 NC_010407.1 UDP-N-acetylmuramoyl-L-alanine ligase 1444699 murC 6158834 murC Clavibacter michiganensis subsp. sepedonicus UDP-N-acetylmuramoyl-L-alanine ligase YP_001710101.1 1443269 D 31964 CDS YP_001710102.1 170781770 6158830 1445119..1445946 1 NC_010407.1 cell division protein FtsQ 1445946 ftsQ 6158830 ftsQ Clavibacter michiganensis subsp. sepedonicus cell division protein FtsQ YP_001710102.1 1445119 D 31964 CDS YP_001710103.1 170781771 6158698 1446084..1447223 1 NC_010407.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1447223 ftsZ 6158698 ftsZ Clavibacter michiganensis subsp. sepedonicus cell division protein FtsZ YP_001710103.1 1446084 D 31964 CDS YP_001710104.1 170781772 6158702 1447310..1447951 1 NC_010407.1 hypothetical protein 1447951 6158702 CMS_1377 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710104.1 1447310 D 31964 CDS YP_001710105.1 170781773 6157220 1448027..1448494 1 NC_010407.1 hypothetical protein 1448494 6157220 CMS_1378 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710105.1 1448027 D 31964 CDS YP_001710106.1 170781774 6157221 1448562..1448861 1 NC_010407.1 hypothetical protein 1448861 6157221 CMS_1379 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710106.1 1448562 D 31964 CDS YP_001710107.1 170781775 6157222 1448908..1449651 1 NC_010407.1 cell division protein 1449651 6157222 CMS_1380 Clavibacter michiganensis subsp. sepedonicus cell division protein YP_001710107.1 1448908 D 31964 CDS YP_001710108.1 170781776 6157223 1449682..1450710 1 NC_010407.1 ribosomal large subunit pseudouridine synthase 1450710 rlu 6157223 rlu Clavibacter michiganensis subsp. sepedonicus ribosomal large subunit pseudouridine synthase YP_001710108.1 1449682 D 31964 CDS YP_001710109.1 170781777 6158937 1450787..1454299 1 NC_010407.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1454299 dnaE 6158937 dnaE Clavibacter michiganensis subsp. sepedonicus DNA polymerase III subunit alpha YP_001710109.1 1450787 D 31964 CDS YP_001710110.1 170781778 6158666 complement(1454406..1454981) 1 NC_010407.1 flavin-dependent reductase 1454981 6158666 CMS_1383 Clavibacter michiganensis subsp. sepedonicus flavin-dependent reductase YP_001710110.1 1454406 R 31964 CDS YP_001710111.1 170781779 6157224 1454980..1456287 1 NC_010407.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1456287 hisD 6157224 hisD Clavibacter michiganensis subsp. sepedonicus histidinol dehydrogenase YP_001710111.1 1454980 D 31964 CDS YP_001710112.1 170781780 6158751 1456305..1456778 1 NC_010407.1 transcriptional regulator NrdR 1456778 nrdR 6158751 nrdR Clavibacter michiganensis subsp. sepedonicus transcriptional regulator NrdR YP_001710112.1 1456305 D 31964 CDS YP_001710113.1 170781781 6157225 1456836..1457876 1 NC_010407.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1457876 pyrD 6157225 pyrD Clavibacter michiganensis subsp. sepedonicus dihydroorotate dehydrogenase 2 YP_001710113.1 1456836 D 31964 CDS YP_001710114.1 170781782 6158909 complement(1457907..1458500) 1 NC_010407.1 hypothetical protein 1458500 6158909 CMS_1387 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710114.1 1457907 R 31964 CDS YP_001710115.1 170781783 6157226 1458541..1459962 1 NC_010407.1 hypothetical protein 1459962 6157226 CMS_1388 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710115.1 1458541 D 31964 CDS YP_001710116.1 170781784 6157227 1460098..1460460 1 NC_010407.1 DNA-binding protein 1460460 6157227 CMS_1389 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710116.1 1460098 D 31964 CDS YP_001710117.1 170781785 6157228 1460546..1461496 1 NC_010407.1 cytochrome C oxidase subunit II 1461496 6157228 CMS_1390 Clavibacter michiganensis subsp. sepedonicus cytochrome C oxidase subunit II YP_001710117.1 1460546 D 31964 CDS YP_001710118.1 170781786 6157229 1461509..1463254 1 NC_010407.1 cytochrome C oxidase subunit I 1463254 6157229 CMS_1391 Clavibacter michiganensis subsp. sepedonicus cytochrome C oxidase subunit I YP_001710118.1 1461509 D 31964 CDS YP_001710119.1 170781787 6157230 1463256..1463672 1 NC_010407.1 hypothetical protein 1463672 6157230 CMS_1392 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710119.1 1463256 D 31964 CDS YP_001710120.1 170781788 6157231 1463677..1464114 1 NC_010407.1 acetyltransferase 1464114 6157231 CMS_1393 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001710120.1 1463677 D 31964 CDS YP_001710121.1 170781789 6157232 1464211..1465173 1 NC_010407.1 N/R; insertion element ISCmi2 transposase 1465173 6157232 CMS_1394 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710121.1 1464211 D 31964 CDS YP_001710122.1 170781790 6157233 complement(1465170..1465967) 1 NC_010407.1 May form pseudogene with upstream CDS; hypothetical protein 1465967 6157233 CMS_1395 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710122.1 1465170 R 31964 CDS YP_001710123.1 170781791 6157234 complement(1466015..1466203) 1 NC_010407.1 May form pseudogene with downstream CDS; hypothetical protein 1466203 6157234 CMS_1396 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710123.1 1466015 R 31964 CDS YP_001710124.1 170781792 6157235 1466390..1467520 1 NC_010407.1 membrane efflux protein 1467520 6157235 CMS_1397 Clavibacter michiganensis subsp. sepedonicus membrane efflux protein YP_001710124.1 1466390 D 31964 CDS YP_001710125.1 170781793 6157236 1467603..1468181 1 NC_010407.1 TetR family transcriptional regulator 1468181 6157236 CMS_1398 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001710125.1 1467603 D 31964 CDS YP_001710126.1 170781794 6157237 1468227..1471169 1 NC_010407.1 hypothetical protein 1471169 6157237 CMS_1399 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710126.1 1468227 D 31964 CDS YP_001710127.1 170781795 6157238 1471166..1473061 1 NC_010407.1 hypothetical protein 1473061 6157238 CMS_1400 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710127.1 1471166 D 31964 CDS YP_001710128.1 170781796 6157239 1473289..1474485 1 NC_010407.1 hypothetical protein 1474485 6157239 CMS_1401 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710128.1 1473289 D 31964 CDS YP_001710129.1 170781797 6157240 complement(1474562..1474864) 1 NC_010407.1 hypothetical protein 1474864 6157240 CMS_1402 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710129.1 1474562 R 31964 CDS YP_001710130.1 170781798 6157241 complement(1475057..1475902) 1 NC_010407.1 hypothetical protein 1475902 6157241 CMS_1403 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710130.1 1475057 R 31964 CDS YP_001710131.1 170781799 6157242 1476081..1476905 1 NC_010407.1 kinase 1476905 6157242 CMS_1404 Clavibacter michiganensis subsp. sepedonicus kinase YP_001710131.1 1476081 D 31964 CDS YP_001710132.1 170781800 6157243 1477006..1478610 1 NC_010407.1 glycosyl transferase 1478610 6157243 CMS_1405 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710132.1 1477006 D 31964 CDS YP_001710133.1 170781801 6157244 1478616..1479443 1 NC_010407.1 phosphatase 1479443 6157244 CMS_1406 Clavibacter michiganensis subsp. sepedonicus phosphatase YP_001710133.1 1478616 D 31964 CDS YP_001710134.1 170781802 6157245 1479536..1482526 1 NC_010407.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 1482526 mnhA 6157245 mnhA Clavibacter michiganensis subsp. sepedonicus monovalent cation/H+ antiporter subunit A YP_001710134.1 1479536 D 31964 CDS YP_001710135.1 170781803 6158815 1482523..1483080 1 NC_010407.1 Na(+)/H(+) antiporter subunit 1483080 6158815 CMS_1408 Clavibacter michiganensis subsp. sepedonicus Na(+)/H(+) antiporter subunit YP_001710135.1 1482523 D 31964 CDS YP_001710136.1 170781804 6157246 1483077..1484669 1 NC_010407.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 1484669 6157246 CMS_1409 Clavibacter michiganensis subsp. sepedonicus monovalent cation/H+ antiporter subunit D YP_001710136.1 1483077 D 31964 CDS YP_001710137.1 170781805 6157247 1484666..1485340 1 NC_010407.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 1485340 6157247 CMS_1410 Clavibacter michiganensis subsp. sepedonicus monovalent cation/H+ antiporter subunit E YP_001710137.1 1484666 D 31964 CDS YP_001710138.1 170781806 6157248 1485337..1485612 1 NC_010407.1 Na(+)/H(+) antiporter subunit 1485612 6157248 CMS_1411 Clavibacter michiganensis subsp. sepedonicus Na(+)/H(+) antiporter subunit YP_001710138.1 1485337 D 31964 CDS YP_001710139.1 170781807 6157249 1485609..1486187 1 NC_010407.1 Na(+)/H(+) antiporter subunit 1486187 6157249 CMS_1412 Clavibacter michiganensis subsp. sepedonicus Na(+)/H(+) antiporter subunit YP_001710139.1 1485609 D 31964 CDS YP_001710140.1 170781808 6157250 1486257..1487951 1 NC_010407.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1487951 ilvD 6157250 ilvD Clavibacter michiganensis subsp. sepedonicus dihydroxy-acid dehydratase YP_001710140.1 1486257 D 31964 CDS YP_001710141.1 170781809 6158767 1487996..1489831 1 NC_010407.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 1 catalytic subunit 1489831 ilvB 6158767 ilvB Clavibacter michiganensis subsp. sepedonicus acetolactate synthase 1 catalytic subunit YP_001710141.1 1487996 D 31964 CDS YP_001710142.1 170781810 6158765 1489828..1490337 1 NC_010407.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1490337 ilvH 6158765 ilvH Clavibacter michiganensis subsp. sepedonicus acetolactate synthase 3 regulatory subunit YP_001710142.1 1489828 D 31964 CDS YP_001710143.1 170781811 6158769 1490518..1491543 1 NC_010407.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1491543 ilvC 6158769 ilvC Clavibacter michiganensis subsp. sepedonicus ketol-acid reductoisomerase YP_001710143.1 1490518 D 31964 CDS YP_001710144.1 170781812 6158766 1491758..1492198 1 NC_010407.1 hypothetical protein 1492198 6158766 CMS_1417 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710144.1 1491758 D 31964 CDS YP_001710145.1 170781813 6157251 1492195..1492563 1 NC_010407.1 hypothetical protein 1492563 6157251 CMS_1418 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710145.1 1492195 D 31964 CDS YP_001710146.1 170781814 6157252 complement(1492574..1492975) 1 NC_010407.1 hypothetical protein 1492975 6157252 CMS_1419 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710146.1 1492574 R 31964 CDS YP_001710147.1 170781815 6157253 1493038..1494627 1 NC_010407.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1494627 serA 6157253 serA Clavibacter michiganensis subsp. sepedonicus D-3-phosphoglycerate dehydrogenase YP_001710147.1 1493038 D 31964 CDS YP_001710148.1 170781816 6158986 complement(1494720..1495343) 1 NC_010407.1 TetR family transcriptional regulator 1495343 6158986 CMS_1421 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001710148.1 1494720 R 31964 CDS YP_001710149.1 170781817 6157254 1495464..1497005 1 NC_010407.1 efflux protein 1497005 6157254 CMS_1422 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001710149.1 1495464 D 31964 CDS YP_001710150.1 170781818 6157255 complement(1497043..1497333) 1 NC_010407.1 hypothetical protein 1497333 6157255 CMS_1423 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710150.1 1497043 R 31964 CDS YP_001710151.1 170781819 6157256 1497403..1498470 1 NC_010407.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1498470 leuB 6157256 leuB Clavibacter michiganensis subsp. sepedonicus 3-isopropylmalate dehydrogenase YP_001710151.1 1497403 D 31964 CDS YP_001710152.1 170781820 6158785 1498479..1499648 1 NC_010407.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1499648 ilvE 6158785 ilvE Clavibacter michiganensis subsp. sepedonicus branched-chain amino acid aminotransferase YP_001710152.1 1498479 D 31964 CDS YP_001710153.1 170781821 6158768 1499706..1500479 1 NC_010407.1 hydrolase 1500479 6158768 CMS_1426 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710153.1 1499706 D 31964 CDS YP_001710154.1 170781822 6157257 1500482..1501255 1 NC_010407.1 lipoprotein 1501255 6157257 CMS_1427 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001710154.1 1500482 D 31964 CDS YP_001710155.1 170781823 6157258 1501269..1502789 1 NC_010407.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1502789 gltX 6157258 gltX Clavibacter michiganensis subsp. sepedonicus glutamyl-tRNA synthetase YP_001710155.1 1501269 D 31964 CDS YP_001710156.1 170781824 6158728 1502827..1503747 1 NC_010407.1 pyridine nucleotide-disulfide oxidoreductase 1503747 6158728 CMS_1429 Clavibacter michiganensis subsp. sepedonicus pyridine nucleotide-disulfide oxidoreductase YP_001710156.1 1502827 D 31964 CDS YP_001710157.1 170781825 6159036 complement(1503998..1504303) 1 NC_010407.1 hypothetical protein 1504303 6159036 CMS_1430 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710157.1 1503998 R 31964 CDS YP_001710158.1 170781826 6157260 1504338..1505057 1 NC_010407.1 hypothetical protein 1505057 6157260 CMS_1431 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710158.1 1504338 D 31964 CDS YP_001710159.1 170781827 6157261 complement(1505130..1506140) 1 NC_010407.1 oxidoreductase 1506140 6157261 CMS_1432 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710159.1 1505130 R 31964 CDS YP_001710160.1 170781828 6157262 complement(1506195..1506809) 1 NC_010407.1 TetR family transcriptional regulator 1506809 6157262 CMS_1433 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001710160.1 1506195 R 31964 CDS YP_001710161.1 170781829 6157263 1506865..1507662 1 NC_010407.1 short chain oxidoreductase 1507662 6157263 CMS_1434 Clavibacter michiganensis subsp. sepedonicus short chain oxidoreductase YP_001710161.1 1506865 D 31964 CDS YP_001710162.1 170781830 6157264 complement(1507731..1508834) 1 NC_010407.1 hypothetical protein 1508834 6157264 CMS_1435 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710162.1 1507731 R 31964 CDS YP_001710163.1 170781831 6157265 complement(1509063..1509491) 1 NC_010407.1 sortase-sorted membrane protein 1509491 6157265 CMS_1436 Clavibacter michiganensis subsp. sepedonicus sortase-sorted membrane protein YP_001710163.1 1509063 R 31964 CDS YP_001710164.1 170781832 6157266 complement(1509519..1510169) 1 NC_010407.1 hypothetical protein 1510169 6157266 CMS_1437 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710164.1 1509519 R 31964 CDS YP_001710165.1 170781833 6159038 1510552..1511328 1 NC_010407.1 hypothetical protein 1511328 6159038 CMS_1438 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710165.1 1510552 D 31964 CDS YP_001710166.1 170781834 6157268 1511339..1512025 1 NC_010407.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1512025 ung 6157268 ung Clavibacter michiganensis subsp. sepedonicus uracil-DNA glycosylase YP_001710166.1 1511339 D 31964 CDS YP_001710167.1 170781835 6159085 1512079..1512768 1 NC_010407.1 Lacks the appropriate stop codon so may be non-functional.; toxin resistance acetyltransferase 1512768 6159085 CMS_1440 Clavibacter michiganensis subsp. sepedonicus toxin resistance acetyltransferase YP_001710167.1 1512079 D 31964 CDS YP_001710168.1 170781836 6157269 complement(1512650..1514002) 1 NC_010407.1 protease 1514002 6157269 CMS_1441 Clavibacter michiganensis subsp. sepedonicus protease YP_001710168.1 1512650 R 31964 CDS YP_001710169.1 170781837 6157270 1514149..1515147 1 NC_010407.1 reductase 1515147 6157270 CMS_1442 Clavibacter michiganensis subsp. sepedonicus reductase YP_001710169.1 1514149 D 31964 CDS YP_001710170.1 170781838 6157271 complement(1515219..1515899) 1 NC_010407.1 hexulose-6-phosphate synthase 1515899 hps 6157271 hps Clavibacter michiganensis subsp. sepedonicus hexulose-6-phosphate synthase YP_001710170.1 1515219 R 31964 CDS YP_001710171.1 170781839 6158758 complement(1515896..1516507) 1 NC_010407.1 6-phospho 3-hexuloisomerase 1516507 rmpB 6158758 rmpB Clavibacter michiganensis subsp. sepedonicus 6-phospho 3-hexuloisomerase YP_001710171.1 1515896 R 31964 CDS YP_001710172.1 170781840 6158938 1516555..1517937 1 NC_010407.1 LuxR family transcriptional regulator 1517937 6158938 CMS_1445 Clavibacter michiganensis subsp. sepedonicus LuxR family transcriptional regulator YP_001710172.1 1516555 D 31964 CDS YP_001710173.1 170781841 6157272 1518103..1520190 1 NC_010407.1 Possible degradation of extracellular 5'-nucleotides for nutritional needs. May be sortase-sorted.; 5'-nucleotidase 1520190 6157272 CMS_1446 Clavibacter michiganensis subsp. sepedonicus 5'-nucleotidase YP_001710173.1 1518103 D 31964 CDS YP_001710174.1 170781842 6157273 1520219..1521730 1 NC_010407.1 amidase 1521730 6157273 CMS_1447 Clavibacter michiganensis subsp. sepedonicus amidase YP_001710174.1 1520219 D 31964 CDS YP_001710175.1 170781843 6157274 complement(1521756..1522469) 1 NC_010407.1 hypothetical protein 1522469 6157274 CMS_1448 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710175.1 1521756 R 31964 CDS YP_001710176.1 170781844 6157275 1522625..1523566 1 NC_010407.1 siderophore-interacting protein 1523566 6157275 CMS_1449 Clavibacter michiganensis subsp. sepedonicus siderophore-interacting protein YP_001710176.1 1522625 D 31964 CDS YP_001710177.1 170781845 6157276 1523569..1523973 1 NC_010407.1 hypothetical protein 1523973 6157276 CMS_1450 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710177.1 1523569 D 31964 CDS YP_001710178.1 170781846 6157277 complement(1523997..1524875) 1 NC_010407.1 oxidoreductase 1524875 6157277 CMS_1451 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710178.1 1523997 R 31964 CDS YP_001710179.1 170781847 6157278 complement(1524872..1525264) 1 NC_010407.1 possibly secreted; hypothetical protein 1525264 6157278 CMS_1452 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710179.1 1524872 R 31964 CDS YP_001710180.1 170781848 6157279 complement(1525261..1526694) 1 NC_010407.1 oxidoreductase 1526694 6157279 CMS_1453 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710180.1 1525261 R 31964 CDS YP_001710181.1 170781849 6157280 complement(1526752..1527531) 1 NC_010407.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1527531 6157280 CMS_1454 Clavibacter michiganensis subsp. sepedonicus enoyl-CoA hydratase YP_001710181.1 1526752 R 31964 CDS YP_001710182.1 170781850 6157281 complement(1527662..1528504) 1 NC_010407.1 arginase 1528504 6157281 CMS_1455 Clavibacter michiganensis subsp. sepedonicus arginase YP_001710182.1 1527662 R 31964 CDS YP_001710183.1 170781851 6157282 complement(1528595..1529164) 1 NC_010407.1 oxidoreductase 1529164 6157282 CMS_1456 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710183.1 1528595 R 31964 CDS YP_001710184.1 170781852 6157283 complement(1529340..1529993) 1 NC_010407.1 hypothetical protein 1529993 6157283 CMS_1457 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710184.1 1529340 R 31964 CDS YP_001710185.1 170781853 6157284 complement(1530192..1532243) 1 NC_010407.1 hypothetical protein 1532243 6157284 CMS_1458 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710185.1 1530192 R 31964 CDS YP_001710186.1 170781854 6157285 complement(1532332..1532742) 1 NC_010407.1 N-terminal truncation relative to homologs may indicate pseudogene.; hypothetical protein 1532742 6157285 CMS_1459 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710186.1 1532332 R 31964 CDS YP_001710187.1 170781855 6157286 complement(1532871..1533113) 1 NC_010407.1 hypothetical protein 1533113 6157286 CMS_1460 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710187.1 1532871 R 31964 CDS YP_001710188.1 170781856 6159030 complement(1533620..1533802) 1 NC_010407.1 hypothetical protein 1533802 6159030 CMS_1461 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710188.1 1533620 R 31964 CDS YP_001710189.1 170781857 6157288 complement(1533836..1534537) 1 NC_010407.1 Contains a PASTA domain which suggest an interaction with peptidoglycan; peptidoglycan associated protein 1534537 6157288 CMS_1462 Clavibacter michiganensis subsp. sepedonicus peptidoglycan associated protein YP_001710189.1 1533836 R 31964 CDS YP_001710190.1 170781858 6157289 complement(1534562..1535245) 1 NC_010407.1 hypothetical protein 1535245 6157289 CMS_1463 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710190.1 1534562 R 31964 CDS YP_001710191.1 170781859 6157290 1535711..1536403 1 NC_010407.1 oxidase 1536403 6157290 CMS_1464 Clavibacter michiganensis subsp. sepedonicus oxidase YP_001710191.1 1535711 D 31964 CDS YP_001710192.1 170781860 6157291 1536481..1537251 1 NC_010407.1 aminopeptidase 1537251 6157291 CMS_1465 Clavibacter michiganensis subsp. sepedonicus aminopeptidase YP_001710192.1 1536481 D 31964 CDS YP_001710193.1 170781861 6157292 complement(1537298..1538053) 1 NC_010407.1 short-chain oxidoreductase 1538053 6157292 CMS_1466 Clavibacter michiganensis subsp. sepedonicus short-chain oxidoreductase YP_001710193.1 1537298 R 31964 CDS YP_001710194.1 170781862 6157293 complement(1538050..1538817) 1 NC_010407.1 short-chain oxidoreductase 1538817 6157293 CMS_1467 Clavibacter michiganensis subsp. sepedonicus short-chain oxidoreductase YP_001710194.1 1538050 R 31964 CDS YP_001710195.1 170781863 6157294 complement(1538814..1540211) 1 NC_010407.1 major facilitator family transporter 1540211 6157294 CMS_1468 Clavibacter michiganensis subsp. sepedonicus major facilitator family transporter YP_001710195.1 1538814 R 31964 CDS YP_001710196.1 170781864 6157295 complement(1540246..1541136) 1 NC_010407.1 deacetylase 1541136 6157295 CMS_1469 Clavibacter michiganensis subsp. sepedonicus deacetylase YP_001710196.1 1540246 R 31964 CDS YP_001710197.1 170781865 6157296 complement(1541162..1542187) 1 NC_010407.1 L-asparaginase 1542187 6157296 CMS_1470 Clavibacter michiganensis subsp. sepedonicus L-asparaginase YP_001710197.1 1541162 R 31964 CDS YP_001710198.1 170781866 6157297 1542359..1543387 1 NC_010407.1 LacI family transcriptional regulator 1543387 6157297 CMS_1471 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001710198.1 1542359 D 31964 CDS YP_001710199.1 170781867 6157298 1543450..1544244 1 NC_010407.1 hypothetical protein 1544244 6157298 CMS_1472 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710199.1 1543450 D 31964 CDS YP_001710200.1 170781868 6157299 complement(1544254..1544898) 1 NC_010407.1 hypothetical protein 1544898 6157299 CMS_1473 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710200.1 1544254 R 31964 CDS YP_001710201.1 170781869 6157300 1545094..1546758 1 NC_010407.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1546758 argS 6157300 argS Clavibacter michiganensis subsp. sepedonicus arginyl-tRNA synthetase YP_001710201.1 1545094 D 31964 CDS YP_001710202.1 170781870 6158608 1546770..1547600 1 NC_010407.1 hypothetical protein 1547600 6158608 CMS_1475 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710202.1 1546770 D 31964 CDS YP_001710203.1 170781871 6157301 1547759..1549258 1 NC_010407.1 diaminopimelate decarboxylase 1549258 lysA 6157301 lysA Clavibacter michiganensis subsp. sepedonicus diaminopimelate decarboxylase YP_001710203.1 1547759 D 31964 CDS YP_001710204.1 170781872 6158799 1549255..1550586 1 NC_010407.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1550586 6158799 CMS_1477 Clavibacter michiganensis subsp. sepedonicus homoserine dehydrogenase YP_001710204.1 1549255 D 31964 CDS YP_001710205.1 170781873 6157302 1550586..1551662 1 NC_010407.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1551662 thrC 6157302 thrC Clavibacter michiganensis subsp. sepedonicus threonine synthase YP_001710205.1 1550586 D 31964 CDS YP_001710206.1 170781874 6159016 1551659..1552624 1 NC_010407.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1552624 thrB 6159016 thrB Clavibacter michiganensis subsp. sepedonicus homoserine kinase YP_001710206.1 1551659 D 31964 CDS YP_001710207.1 170781875 6159015 complement(1552635..1553597) 1 NC_010407.1 Nu; insertion element IS1121 transposase 1553597 6159015 CMS_1480 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710207.1 1552635 R 31964 CDS YP_001710208.1 170781876 6157303 1553994..1556543 1 NC_010407.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1556543 rho 6157303 rho Clavibacter michiganensis subsp. sepedonicus transcription termination factor Rho YP_001710208.1 1553994 D 31964 CDS YP_001710209.1 170781877 6158930 1556549..1557628 1 NC_010407.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1557628 prfA 6158930 prfA Clavibacter michiganensis subsp. sepedonicus peptide chain release factor 1 YP_001710209.1 1556549 D 31964 CDS YP_001710210.1 170781878 6158877 1557653..1558528 1 NC_010407.1 methylase 1558528 6158877 CMS_1483 Clavibacter michiganensis subsp. sepedonicus methylase YP_001710210.1 1557653 D 31964 CDS YP_001710211.1 170781879 6157304 complement(1558568..1559221) 1 NC_010407.1 hydrolase 1559221 6157304 CMS_1484 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710211.1 1558568 R 31964 CDS YP_001710212.1 170781880 6157305 1559293..1560255 1 NC_010407.1 hypothetical protein 1560255 6157305 CMS_1485 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710212.1 1559293 D 31964 CDS YP_001710213.1 170781881 6157306 1560252..1561571 1 NC_010407.1 glycosyl transferase 1561571 6157306 CMS_1486 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710213.1 1560252 D 31964 CDS YP_001710214.1 170781882 6157307 1561568..1562038 1 NC_010407.1 hypothetical protein 1562038 6157307 CMS_1487 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710214.1 1561568 D 31964 CDS YP_001710215.1 170781883 6157308 1562136..1563098 1 NC_010407.1 N/R; insertion element IS1121 transposase 1563098 6157308 CMS_1488 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710215.1 1562136 D 31964 CDS YP_001710216.1 170781884 6157309 complement(1563152..1563547) 1 NC_010407.1 globin 1563547 6157309 CMS_1489 Clavibacter michiganensis subsp. sepedonicus globin YP_001710216.1 1563152 R 31964 CDS YP_001710217.1 170781885 6157310 complement(1563547..1564890) 1 NC_010407.1 mechanosensitive ion channel 1564890 6157310 CMS_1490 Clavibacter michiganensis subsp. sepedonicus mechanosensitive ion channel YP_001710217.1 1563547 R 31964 CDS YP_001710218.1 170781886 6157311 complement(1565048..1567591) 1 NC_010407.1 aminopeptidase 1567591 pepN 6157311 pepN Clavibacter michiganensis subsp. sepedonicus aminopeptidase YP_001710218.1 1565048 R 31964 CDS YP_001710219.1 170781887 6158858 1567744..1568370 1 NC_010407.1 hypothetical protein 1568370 6158858 CMS_1492 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710219.1 1567744 D 31964 CDS YP_001710220.1 170781888 6157312 1568484..1568972 1 NC_010407.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 1568972 6157312 CMS_1493 Clavibacter michiganensis subsp. sepedonicus ribose-5-phosphate isomerase B YP_001710220.1 1568484 D 31964 CDS YP_001710221.1 170781889 6157313 1568979..1569968 1 NC_010407.1 formamidopyrimidine-DNA glycosylase 1569968 6157313 CMS_1494 Clavibacter michiganensis subsp. sepedonicus formamidopyrimidine-DNA glycosylase YP_001710221.1 1568979 D 31964 CDS YP_001710222.1 170781890 6157314 complement(1570087..1570572) 1 NC_010407.1 hypothetical protein 1570572 6157314 CMS_1495 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710222.1 1570087 R 31964 CDS YP_001710223.1 170781891 6157315 complement(1570715..1575658) 1 NC_010407.1 hypothetical protein 1575658 6157315 CMS_1496 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710223.1 1570715 R 31964 CDS YP_001710224.1 170781892 6159057 1576698..1578140 1 NC_010407.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1578140 tig 6159057 tig Clavibacter michiganensis subsp. sepedonicus trigger factor YP_001710224.1 1576698 D 31964 CDS YP_001710225.1 170781893 6159018 1578325..1578927 1 NC_010407.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1578927 clpP 6159018 clpP Clavibacter michiganensis subsp. sepedonicus ATP-dependent Clp protease proteolytic subunit YP_001710225.1 1578325 D 31964 CDS YP_001710226.1 170781894 6158632 1578963..1579643 1 NC_010407.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1579643 clpP2 6158632 clpP2 Clavibacter michiganensis subsp. sepedonicus ATP-dependent Clp protease proteolytic subunit YP_001710226.1 1578963 D 31964 CDS YP_001710227.1 170781895 6158633 complement(1579708..1580850) 1 NC_010407.1 monooxygenase 1580850 6158633 CMS_1500 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001710227.1 1579708 R 31964 CDS YP_001710228.1 170781896 6157317 1581017..1582297 1 NC_010407.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1582297 clpX 6157317 clpX Clavibacter michiganensis subsp. sepedonicus ATP-dependent protease ATP-binding subunit ClpX YP_001710228.1 1581017 D 31964 CDS YP_001710229.1 170781897 6158635 complement(1582379..1584442) 1 NC_010407.1 oligopeptidase 1584442 6158635 CMS_1502 Clavibacter michiganensis subsp. sepedonicus oligopeptidase YP_001710229.1 1582379 R 31964 CDS YP_001710230.1 170781898 6157318 1584482..1585285 1 NC_010407.1 hypothetical protein 1585285 6157318 CMS_1503 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710230.1 1584482 D 31964 CDS YP_001710231.1 170781899 6157319 complement(1585367..1585630) 1 NC_010407.1 hypothetical protein 1585630 6157319 CMS_1504 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710231.1 1585367 R 31964 CDS YP_001710232.1 170781900 6157320 complement(1585630..1586082) 1 NC_010407.1 acetyltransferase 1586082 6157320 CMS_1505 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001710232.1 1585630 R 31964 CDS YP_001710233.1 170781901 6157321 complement(1586079..1588724) 1 NC_010407.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1588724 valS 6157321 valS Clavibacter michiganensis subsp. sepedonicus valyl-tRNA synthetase YP_001710233.1 1586079 R 31964 CDS YP_001710234.1 170781902 6157322 complement(1588872..1590815) 1 NC_010407.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 1590815 pckG 6157322 pckG Clavibacter michiganensis subsp. sepedonicus phosphoenolpyruvate carboxykinase YP_001710234.1 1588872 R 31964 CDS YP_001710235.1 170781903 6158852 1590889..1592352 1 NC_010407.1 DNA-binding protein 1592352 6158852 CMS_1508 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710235.1 1590889 D 31964 CDS YP_001710236.1 170781904 6157323 complement(1592371..1594035) 1 NC_010407.1 nucleotide-binding ABC transporter subunit 1594035 6157323 CMS_1509 Clavibacter michiganensis subsp. sepedonicus nucleotide-binding ABC transporter subunit YP_001710236.1 1592371 R 31964 CDS YP_001710237.1 170781905 6157324 complement(1594032..1594892) 1 NC_010407.1 ABC transporter integral membrane protein 1594892 6157324 CMS_1510 Clavibacter michiganensis subsp. sepedonicus ABC transporter integral membrane protein YP_001710237.1 1594032 R 31964 CDS YP_001710238.1 170781906 6157325 complement(1594889..1595965) 1 NC_010407.1 ABC transporter integral membrane protein 1595965 6157325 CMS_1511 Clavibacter michiganensis subsp. sepedonicus ABC transporter integral membrane protein YP_001710238.1 1594889 R 31964 CDS YP_001710239.1 170781907 6157326 complement(1595962..1597608) 1 NC_010407.1 ABC transporter substrate-binding protein 1597608 6157326 CMS_1512 Clavibacter michiganensis subsp. sepedonicus ABC transporter substrate-binding protein YP_001710239.1 1595962 R 31964 CDS YP_001710240.1 170781908 6157327 1597644..1598318 1 NC_010407.1 TetR family transcriptional regulator 1598318 6157327 CMS_1513 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001710240.1 1597644 D 31964 CDS YP_001710241.1 170781909 6157328 1598326..1599108 1 NC_010407.1 hypothetical protein 1599108 6157328 CMS_1514 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710241.1 1598326 D 31964 CDS YP_001710242.1 170781910 6157329 1599226..1600188 1 NC_010407.1 N/R; insertion element ISCmi2 transposase 1600188 6157329 CMS_1515 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710242.1 1599226 D 31964 CDS YP_001710243.1 170781911 6157330 complement(1600201..1600707) 1 NC_010407.1 hypothetical protein 1600707 6157330 CMS_1516 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710243.1 1600201 R 31964 CDS YP_001710244.1 170781912 6157331 1600797..1601306 1 NC_010407.1 hypothetical protein 1601306 6157331 CMS_1517 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710244.1 1600797 D 31964 CDS YP_001710245.1 170781913 6157333 1601992..1602738 1 NC_010407.1 oxidoreductase 1602738 6157333 CMS_1519 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710245.1 1601992 D 31964 CDS YP_001710246.1 170781914 6157334 1602785..1603336 1 NC_010407.1 hypothetical protein 1603336 6157334 CMS_1520 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710246.1 1602785 D 31964 CDS YP_001710247.1 170781915 6157335 1603454..1604452 1 NC_010407.1 hypothetical protein 1604452 6157335 CMS_1521 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710247.1 1603454 D 31964 CDS YP_001710248.1 170781916 6157336 1604531..1605823 1 NC_010407.1 DNA polymerase IV 1605823 6157336 CMS_1522 Clavibacter michiganensis subsp. sepedonicus DNA polymerase IV YP_001710248.1 1604531 D 31964 CDS YP_001710249.1 170781917 6157337 1606108..1606335 1 NC_010407.1 N-terminal truncation relative to homologue; hypothetical protein 1606335 6157337 CMS_1523 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710249.1 1606108 D 31964 CDS YP_001710250.1 170781918 6157338 complement(1606383..1607696) 1 NC_010407.1 nucleotide-sugar dehydrogenase 1607696 6157338 CMS_1524 Clavibacter michiganensis subsp. sepedonicus nucleotide-sugar dehydrogenase YP_001710250.1 1606383 R 31964 CDS YP_001710251.1 170781919 6157339 complement(1607866..1609668) 1 NC_010407.1 sugar synthase 1609668 6157339 CMS_1525 Clavibacter michiganensis subsp. sepedonicus sugar synthase YP_001710251.1 1607866 R 31964 CDS YP_001710252.1 170781920 6157340 complement(1609665..1612016) 1 NC_010407.1 maltooligosyl trehalose synthase 1612016 6157340 CMS_1526 Clavibacter michiganensis subsp. sepedonicus maltooligosyl trehalose synthase YP_001710252.1 1609665 R 31964 CDS YP_001710253.1 170781921 6159023 1614426..1614758 1 NC_010407.1 Possible C-terminal membrane association; hypothetical protein 1614758 6159023 CMS_1529 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710253.1 1614426 D 31964 CDS YP_001710254.1 170781922 6157342 1615017..1615667 1 NC_010407.1 hypothetical protein 1615667 6157342 CMS_1530 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710254.1 1615017 D 31964 CDS YP_001710255.1 170781923 6157343 1615670..1617232 1 NC_010407.1 ABC transporter ATP-binding subunit 1617232 6157343 CMS_1531 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710255.1 1615670 D 31964 CDS YP_001710256.1 170781924 6157344 1617229..1618023 1 NC_010407.1 cobalt transport protein 1618023 6157344 CMS_1532 Clavibacter michiganensis subsp. sepedonicus cobalt transport protein YP_001710256.1 1617229 D 31964 CDS YP_001710257.1 170781925 6157345 1618013..1618561 1 NC_010407.1 ATP-binding protein 1618561 6157345 CMS_1533 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001710257.1 1618013 D 31964 CDS YP_001710258.1 170781926 6157346 1618571..1618843 1 NC_010407.1 hypothetical protein 1618843 6157346 CMS_1534 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710258.1 1618571 D 31964 CDS YP_001710259.1 170781927 6157347 complement(1619002..1619352) 1 NC_010407.1 hypothetical protein 1619352 6157347 CMS_1535 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710259.1 1619002 R 31964 CDS YP_001710260.1 170781928 6159043 complement(1619567..1620187) 1 NC_010407.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 1620187 6159043 CMS_1536 Clavibacter michiganensis subsp. sepedonicus oligoribonuclease YP_001710260.1 1619567 R 31964 CDS YP_001710261.1 170781929 6157349 1620244..1620459 1 NC_010407.1 hypothetical protein 1620459 6157349 CMS_1537 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710261.1 1620244 D 31964 CDS YP_001710262.1 170781930 6157350 1620547..1620825 1 NC_010407.1 hypothetical protein 1620825 6157350 CMS_1538 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710262.1 1620547 D 31964 CDS YP_001710263.1 170781931 6159031 1620953..1621774 1 NC_010407.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1621774 nadE 6159031 nadE Clavibacter michiganensis subsp. sepedonicus NAD synthetase YP_001710263.1 1620953 D 31964 CDS YP_001710264.1 170781932 6158837 complement(1621861..1622568) 1 NC_010407.1 hypothetical protein 1622568 6158837 CMS_1540 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710264.1 1621861 R 31964 CDS YP_001710265.1 170781933 6157352 complement(1622652..1622888) 1 NC_010407.1 hypothetical protein 1622888 6157352 CMS_1541 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710265.1 1622652 R 31964 CDS YP_001710266.1 170781934 6157353 1623059..1623586 1 NC_010407.1 peptide methionine sulfoxide reductase 1623586 msrA 6157353 msrA Clavibacter michiganensis subsp. sepedonicus peptide methionine sulfoxide reductase YP_001710266.1 1623059 D 31964 CDS YP_001710267.1 170781935 6158825 1623693..1623926 1 NC_010407.1 hypothetical protein 1623926 6158825 CMS_1543 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710267.1 1623693 D 31964 CDS YP_001710268.1 170781936 6157355 1624375..1624938 1 NC_010407.1 MarR family transcriptional regulator 1624938 6157355 CMS_1544 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001710268.1 1624375 D 31964 CDS YP_001710269.1 170781937 6157356 1624935..1625414 1 NC_010407.1 lipoprotein 1625414 6157356 CMS_1545 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001710269.1 1624935 D 31964 CDS YP_001710270.1 170781938 6157357 1625478..1627160 1 NC_010407.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 1627160 6157357 CMS_1546 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001710270.1 1625478 D 31964 CDS YP_001710271.1 170781939 6157358 1627164..1627637 1 NC_010407.1 hypothetical protein 1627637 6157358 CMS_1547 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710271.1 1627164 D 31964 CDS YP_001710272.1 170781940 6157359 complement(1627647..1628552) 1 NC_010407.1 acyl CoA thioesterase II 1628552 tesB 6157359 tesB Clavibacter michiganensis subsp. sepedonicus acyl CoA thioesterase II YP_001710272.1 1627647 R 31964 CDS YP_001710273.1 170781941 6159010 1628635..1629330 1 NC_010407.1 hypothetical protein 1629330 6159010 CMS_1549 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710273.1 1628635 D 31964 CDS YP_001710274.1 170781942 6157360 1629428..1630390 1 NC_010407.1 N/R/C heme-binding?; insertion element IS1121 transposase 1630390 6157360 CMS_1550 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710274.1 1629428 D 31964 CDS YP_001710275.1 170781943 6157361 complement(1630535..1631095) 1 NC_010407.1 heme-binding protein 1631095 6157361 CMS_1551 Clavibacter michiganensis subsp. sepedonicus heme-binding protein YP_001710275.1 1630535 R 31964 CDS YP_001710276.1 170781944 6157362 complement(1631261..1631800) 1 NC_010407.1 hypothetical protein 1631800 6157362 CMS_1552 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710276.1 1631261 R 31964 CDS YP_001710277.1 170781945 6157363 1631852..1632577 1 NC_010407.1 hypothetical protein 1632577 6157363 CMS_1553 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710277.1 1631852 D 31964 CDS YP_001710278.1 170781946 6157364 1632574..1632792 1 NC_010407.1 hypothetical protein 1632792 6157364 CMS_1554 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710278.1 1632574 D 31964 CDS YP_001710279.1 170781947 6157365 1632885..1634111 1 NC_010407.1 tRNA-dihydrouridine synthase 1634111 6157365 CMS_1555 Clavibacter michiganensis subsp. sepedonicus tRNA-dihydrouridine synthase YP_001710279.1 1632885 D 31964 CDS YP_001710280.1 170781948 6157366 1634116..1635375 1 NC_010407.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1635375 6157366 CMS_1556 Clavibacter michiganensis subsp. sepedonicus deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001710280.1 1634116 D 31964 CDS YP_001710281.1 170781949 6157367 1635440..1637332 1 NC_010407.1 synthesizes RNA primers at the replication forks; DNA primase 1637332 dnaG 6157367 dnaG Clavibacter michiganensis subsp. sepedonicus DNA primase YP_001710281.1 1635440 D 31964 CDS YP_001710282.1 170781950 6158667 1637531..1639186 1 NC_010407.1 substrate-binding transport protein 1639186 6158667 CMS_1558 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001710282.1 1637531 D 31964 CDS YP_001710283.1 170781951 6157368 1639333..1640427 1 NC_010407.1 transport protein 1640427 6157368 CMS_1559 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710283.1 1639333 D 31964 CDS YP_001710284.1 170781952 6157369 1640429..1641403 1 NC_010407.1 transport protein 1641403 6157369 CMS_1560 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710284.1 1640429 D 31964 CDS YP_001710285.1 170781953 6157370 1641400..1643112 1 NC_010407.1 ABC transporter ATP-binding subunit 1643112 6157370 CMS_1561 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710285.1 1641400 D 31964 CDS YP_001710286.1 170781954 6157371 1643226..1644161 1 NC_010407.1 ABC transporter ATP-binding subunit 1644161 6157371 CMS_1562 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710286.1 1643226 D 31964 CDS YP_001710287.1 170781955 6157372 1644272..1645177 1 NC_010407.1 dehydrogenase 1645177 6157372 CMS_1563 Clavibacter michiganensis subsp. sepedonicus dehydrogenase YP_001710287.1 1644272 D 31964 CDS YP_001710288.1 170781956 6157373 1645241..1646272 1 NC_010407.1 hypothetical protein 1646272 6157373 CMS_1564 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710288.1 1645241 D 31964 CDS YP_001710289.1 170781957 6157374 complement(1646292..1646681) 1 NC_010407.1 hypothetical protein 1646681 6157374 CMS_1565 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710289.1 1646292 R 31964 CDS YP_001710290.1 170781958 6157375 1646794..1646982 1 NC_010407.1 hypothetical protein 1646982 6157375 CMS_1566 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710290.1 1646794 D 31964 CDS YP_001710291.1 170781959 6157376 1647083..1648033 1 NC_010407.1 hypothetical protein 1648033 6157376 CMS_1567 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710291.1 1647083 D 31964 CDS YP_001710292.1 170781960 6157377 1648030..1649649 1 NC_010407.1 hydrolase 1649649 6157377 CMS_1568 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710292.1 1648030 D 31964 CDS YP_001710293.1 170781961 6157378 1649646..1651022 1 NC_010407.1 Similar to downstream CDS, some similarity to C-terminal portion of other hypotheticals; hypothetical protein 1651022 6157378 CMS_1569 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710293.1 1649646 D 31964 CDS YP_001710294.1 170781962 6157379 1651019..1652437 1 NC_010407.1 Similar to upstream CDS, some similarity to C-terminal portion of other hypotheticals; hypothetical protein 1652437 6157379 CMS_1570 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710294.1 1651019 D 31964 CDS YP_001710295.1 170781963 6157380 1652611..1653639 1 NC_010407.1 transport protein 1653639 6157380 CMS_1571 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710295.1 1652611 D 31964 CDS YP_001710296.1 170781964 6157381 1653636..1654430 1 NC_010407.1 ABC transporter ATP-binding protein 1654430 6157381 CMS_1572 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001710296.1 1653636 D 31964 CDS YP_001710297.1 170781965 6157382 1654427..1655437 1 NC_010407.1 substrate-binding transport protein 1655437 6157382 CMS_1573 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001710297.1 1654427 D 31964 CDS YP_001710298.1 170781966 6157383 1655430..1656713 1 NC_010407.1 transport protein 1656713 6157383 CMS_1574 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710298.1 1655430 D 31964 CDS YP_001710299.1 170781967 6157384 1656811..1657773 1 NC_010407.1 N/I; insertion element IS1121 transposase 1657773 6157384 CMS_1575 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710299.1 1656811 D 31964 CDS YP_001710300.1 170781968 6159033 complement(1658019..1658585) 1 NC_010407.1 peptide deformylase 1658585 def 6159033 def Clavibacter michiganensis subsp. sepedonicus peptide deformylase YP_001710300.1 1658019 R 31964 CDS YP_001710301.1 170781969 6158660 1658625..1659536 1 NC_010407.1 hypothetical protein 1659536 6158660 CMS_1577 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710301.1 1658625 D 31964 CDS YP_001710302.1 170781970 6157386 1659705..1660964 1 NC_010407.1 glycosyl transferase 1660964 6157386 CMS_1578 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710302.1 1659705 D 31964 CDS YP_001710303.1 170781971 6159052 1661058..1663493 1 NC_010407.1 acyltransferase 1663493 6159052 CMS_1579 Clavibacter michiganensis subsp. sepedonicus acyltransferase YP_001710303.1 1661058 D 31964 CDS YP_001710304.1 170781972 6157388 complement(1663599..1664603) 1 NC_010407.1 GDP-l-fucose synthetase 1664603 fcl 6157388 fcl Clavibacter michiganensis subsp. sepedonicus GDP-l-fucose synthetase YP_001710304.1 1663599 R 31964 CDS YP_001710305.1 170781973 6158686 complement(1664600..1665652) 1 NC_010407.1 GDP-mannose 4,6-dehydratase 1665652 gmd 6158686 gmd Clavibacter michiganensis subsp. sepedonicus GDP-mannose 4,6-dehydratase YP_001710305.1 1664600 R 31964 CDS YP_001710306.1 170781974 6158730 1665823..1667109 1 NC_010407.1 surface polysaccharide biosynthesis glycosyl transferase 1667109 wcaI 6158730 wcaI Clavibacter michiganensis subsp. sepedonicus surface polysaccharide biosynthesis glycosyl transferase YP_001710306.1 1665823 D 31964 CDS YP_001710307.1 170781975 6159094 1667106..1667687 1 NC_010407.1 surface polysaccharide biosynthesis acetyl transferase 1667687 wcaF 6159094 wcaF Clavibacter michiganensis subsp. sepedonicus surface polysaccharide biosynthesis acetyl transferase YP_001710307.1 1667106 D 31964 CDS YP_001710308.1 170781976 6159093 1667684..1668808 1 NC_010407.1 glycosyl transferase 1668808 6159093 CMS_1584 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710308.1 1667684 D 31964 CDS YP_001710309.1 170781977 6157389 1668805..1670325 1 NC_010407.1 polysaccharide polymerase 1670325 rfc 6157389 rfc Clavibacter michiganensis subsp. sepedonicus polysaccharide polymerase YP_001710309.1 1668805 D 31964 CDS YP_001710310.1 170781978 6158929 complement(1670820..1671215) 1 NC_010407.1 hypothetical protein 1671215 6158929 CMS_1586 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710310.1 1670820 R 31964 CDS YP_001710311.1 170781979 6157390 complement(1671212..1672150) 1 NC_010407.1 Homologues in surface polysaccharide gene clusters.; hypothetical protein 1672150 6157390 CMS_1587 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710311.1 1671212 R 31964 CDS YP_001710312.1 170781980 6157391 complement(1672174..1673274) 1 NC_010407.1 glycosyl transferase 1673274 6157391 CMS_1588 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710312.1 1672174 R 31964 CDS YP_001710313.1 170781981 6157392 complement(1673337..1674536) 1 NC_010407.1 surface polysaccharide flippase 1674536 wzx 6157392 wzx Clavibacter michiganensis subsp. sepedonicus surface polysaccharide flippase YP_001710313.1 1673337 R 31964 CDS YP_001710314.1 170781982 6159095 complement(1674632..1676221) 1 NC_010407.1 responsible for linkage of the initial sugar to the lipid carrier in surface polysaccharide biosynthesis; initial glycosyl transferase 1676221 6159095 CMS_1590 Clavibacter michiganensis subsp. sepedonicus initial glycosyl transferase YP_001710314.1 1674632 R 31964 CDS YP_001710315.1 170781983 6157393 complement(1676343..1676630) 1 NC_010407.1 hypothetical protein 1676630 6157393 CMS_1591 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710315.1 1676343 R 31964 CDS YP_001710316.1 170781984 6157394 complement(1676747..1676950) 1 NC_010407.1 cold shock protein 1676950 csp 6157394 csp Clavibacter michiganensis subsp. sepedonicus cold shock protein YP_001710316.1 1676747 R 31964 CDS YP_001710317.1 170781985 6158644 1677101..1678879 1 NC_010407.1 DNA polymerase I 1678879 polA 6158644 polA Clavibacter michiganensis subsp. sepedonicus DNA polymerase I YP_001710317.1 1677101 D 31964 CDS YP_001710318.1 170781986 6158871 1678931..1679122 1 NC_010407.1 hypothetical protein 1679122 6158871 CMS_1594 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710318.1 1678931 D 31964 CDS YP_001710319.1 170781987 6157395 1679230..1680093 1 NC_010407.1 hypothetical protein 1680093 6157395 CMS_1595 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710319.1 1679230 D 31964 CDS YP_001710320.1 170781988 6157396 complement(1680095..1680697) 1 NC_010407.1 PadR family transcriptional regulator 1680697 6157396 CMS_1596 Clavibacter michiganensis subsp. sepedonicus PadR family transcriptional regulator YP_001710320.1 1680095 R 31964 CDS YP_001710321.1 170781989 6157397 1681000..1681479 1 NC_010407.1 hypothetical protein 1681479 6157397 CMS_1598 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710321.1 1681000 D 31964 CDS YP_001710322.1 170781990 6157398 complement(1681573..1682814) 1 NC_010407.1 3-oxoacyl-ACP synthase 1682814 kasA 6157398 kasA Clavibacter michiganensis subsp. sepedonicus 3-oxoacyl-ACP synthase YP_001710322.1 1681573 R 31964 CDS YP_001710323.1 170781991 6158778 complement(1682894..1683142) 1 NC_010407.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1683142 acpP 6158778 acpP Clavibacter michiganensis subsp. sepedonicus acyl carrier protein YP_001710323.1 1682894 R 31964 CDS YP_001710324.1 170781992 6158589 complement(1683196..1684170) 1 NC_010407.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1684170 fabH 6158589 fabH Clavibacter michiganensis subsp. sepedonicus 3-oxoacyl-ACP synthase YP_001710324.1 1683196 R 31964 CDS YP_001710325.1 170781993 6158680 complement(1684240..1685160) 1 NC_010407.1 malonyl CoA-acyl carrier protein transacylase 1685160 fabD 6158680 fabD Clavibacter michiganensis subsp. sepedonicus malonyl CoA-acyl carrier protein transacylase YP_001710325.1 1684240 R 31964 CDS YP_001710326.1 170781994 6158678 complement(1685255..1686529) 1 NC_010407.1 hypothetical protein 1686529 6158678 CMS_1603 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710326.1 1685255 R 31964 CDS YP_001710327.1 170781995 6157399 complement(1686546..1689317) 1 NC_010407.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 1689317 aceE 6157399 aceE Clavibacter michiganensis subsp. sepedonicus pyruvate dehydrogenase subunit E1 YP_001710327.1 1686546 R 31964 CDS YP_001710328.1 170781996 6158587 1689443..1689985 1 NC_010407.1 hypothetical protein 1689985 6158587 CMS_1605 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710328.1 1689443 D 31964 CDS YP_001710329.1 170781997 6157400 complement(1690010..1690699) 1 NC_010407.1 hypothetical protein 1690699 6157400 CMS_1606 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710329.1 1690010 R 31964 CDS YP_001710330.1 170781998 6159069 complement(1690917..1691603) 1 NC_010407.1 Has high confidence N-terminal extension relative to homologues; tetracycline repressor protein 1691603 tetR 6159069 tetR Clavibacter michiganensis subsp. sepedonicus tetracycline repressor protein YP_001710330.1 1690917 R 31964 CDS YP_001710331.1 170781999 6159011 1691680..1692243 1 NC_010407.1 biotin synthase 1692243 bioY 6159011 bioY Clavibacter michiganensis subsp. sepedonicus biotin synthase YP_001710331.1 1691680 D 31964 CDS YP_001710332.1 170782000 6158626 1692240..1692941 1 NC_010407.1 ABC transporter ATP-binding subunit 1692941 6158626 CMS_1609 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710332.1 1692240 D 31964 CDS YP_001710333.1 170782001 6157402 1692938..1693549 1 NC_010407.1 hypothetical protein 1693549 6157402 CMS_1610 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710333.1 1692938 D 31964 CDS YP_001710334.1 170782002 6157403 1693635..1693826 1 NC_010407.1 hypothetical protein 1693826 6157403 CMS_1611 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710334.1 1693635 D 31964 CDS YP_001710335.1 170782003 6157404 1693879..1694706 1 NC_010407.1 hypothetical protein 1694706 6157404 CMS_1612 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710335.1 1693879 D 31964 CDS YP_001710336.1 170782004 6157405 1694762..1695529 1 NC_010407.1 hypothetical protein 1695529 6157405 CMS_1613 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710336.1 1694762 D 31964 CDS YP_001710337.1 170782005 6157406 complement(1696033..1696854) 1 NC_010407.1 polyphosphate glucokinase 1696854 ppgK 6157406 ppgK Clavibacter michiganensis subsp. sepedonicus polyphosphate glucokinase YP_001710337.1 1696033 R 31964 CDS YP_001710338.1 170782006 6158874 1696929..1697111 1 NC_010407.1 hypothetical protein 1697111 6158874 CMS_1615 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710338.1 1696929 D 31964 CDS YP_001710339.1 170782007 6157407 complement(1697121..1697990) 1 NC_010407.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1697990 panB 6157407 panB Clavibacter michiganensis subsp. sepedonicus 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001710339.1 1697121 R 31964 CDS YP_001710340.1 170782008 6158847 1698076..1699413 1 NC_010407.1 glutamine synthetase 1699413 glnA2 6158847 glnA2 Clavibacter michiganensis subsp. sepedonicus glutamine synthetase YP_001710340.1 1698076 D 31964 CDS YP_001710341.1 170782009 6158723 1699472..1702492 1 NC_010407.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1702492 glnE 6158723 glnE Clavibacter michiganensis subsp. sepedonicus bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_001710341.1 1699472 D 31964 CDS YP_001710342.1 170782010 6158724 complement(1702581..1704005) 1 NC_010407.1 glutamine synthetase 1704005 glnA 6158724 glnA Clavibacter michiganensis subsp. sepedonicus glutamine synthetase YP_001710342.1 1702581 R 31964 CDS YP_001710343.1 170782011 6158722 1704199..1704627 1 NC_010407.1 hypothetical protein 1704627 6158722 CMS_1620 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710343.1 1704199 D 31964 CDS YP_001710344.1 170782012 6157408 complement(1704654..1705118) 1 NC_010407.1 hypothetical protein 1705118 6157408 CMS_1621 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710344.1 1704654 R 31964 CDS YP_001710345.1 170782013 6157409 complement(1705436..1706089) 1 NC_010407.1 hypothetical protein 1706089 6157409 CMS_1622 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710345.1 1705436 R 31964 CDS YP_001710346.1 170782014 6157410 1706525..1708081 1 NC_010407.1 Has weak matches to protein kinases; membrane-spanning protein 1708081 6157410 CMS_1623 Clavibacter michiganensis subsp. sepedonicus membrane-spanning protein YP_001710346.1 1706525 D 31964 CDS YP_001710347.1 170782015 6157411 complement(1708107..1709555) 1 NC_010407.1 dihydrolipoamide succinyltransferase 1709555 sucB 6157411 sucB Clavibacter michiganensis subsp. sepedonicus dihydrolipoamide succinyltransferase YP_001710347.1 1708107 R 31964 CDS YP_001710348.1 170782016 6158998 complement(1709616..1710989) 1 NC_010407.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1710989 pdhD 6158998 pdhD Clavibacter michiganensis subsp. sepedonicus dihydrolipoamide dehydrogenase YP_001710348.1 1709616 R 31964 CDS YP_001710349.1 170782017 6158855 complement(1711081..1712544) 1 NC_010407.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1712544 pepA 6158855 pepA Clavibacter michiganensis subsp. sepedonicus leucyl aminopeptidase YP_001710349.1 1711081 R 31964 CDS YP_001710350.1 170782018 6158857 1712826..1713638 1 NC_010407.1 hypothetical protein 1713638 6158857 CMS_1627 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710350.1 1712826 D 31964 CDS YP_001710351.1 170782019 6157412 1713714..1715036 1 NC_010407.1 transport protein 1715036 6157412 CMS_1628 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710351.1 1713714 D 31964 CDS YP_001710352.1 170782020 6157413 1715664..1716731 1 NC_010407.1 RNA polymerase sigma factor 1716731 6157413 CMS_1629 Clavibacter michiganensis subsp. sepedonicus RNA polymerase sigma factor YP_001710352.1 1715664 D 31964 CDS YP_001710353.1 170782021 6157414 1716735..1718051 1 NC_010407.1 ligase 1718051 6157414 CMS_1630 Clavibacter michiganensis subsp. sepedonicus ligase YP_001710353.1 1716735 D 31964 CDS YP_001710354.1 170782022 6157415 1718048..1718782 1 NC_010407.1 amidotransferase 1718782 6157415 CMS_1631 Clavibacter michiganensis subsp. sepedonicus amidotransferase YP_001710354.1 1718048 D 31964 CDS YP_001710355.1 170782023 6157416 complement(1718893..1719120) 1 NC_010407.1 Homologues in Mycobacteriophage; hypothetical protein 1719120 6157416 CMS_1632 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710355.1 1718893 R 31964 CDS YP_001710356.1 170782024 6157417 1719335..1721413 1 NC_010407.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1721413 gyrB 6157417 gyrB Clavibacter michiganensis subsp. sepedonicus DNA topoisomerase IV subunit B YP_001710356.1 1719335 D 31964 CDS YP_001710357.1 170782025 6158740 complement(1721495..1724041) 1 NC_010407.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1724041 gyrA 6158740 gyrA Clavibacter michiganensis subsp. sepedonicus DNA topoisomerase IV subunit A YP_001710357.1 1721495 R 31964 CDS YP_001710358.1 170782026 6158739 1724127..1725266 1 NC_010407.1 hypothetical protein 1725266 6158739 CMS_1635 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710358.1 1724127 D 31964 CDS YP_001710359.1 170782027 6157418 complement(1725322..1726521) 1 NC_010407.1 DNA-binding protein 1726521 6157418 CMS_1636 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710359.1 1725322 R 31964 CDS YP_001710360.1 170782028 6157419 1726776..1727132 1 NC_010407.1 hypothetical protein 1727132 6157419 CMS_1637 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710360.1 1726776 D 31964 CDS YP_001710361.1 170782029 6157420 complement(1727143..1728105) 1 NC_010407.1 N; insertion element IS1121 transposase 1728105 6157420 CMS_1638 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710361.1 1727143 R 31964 CDS YP_001710362.1 170782030 6157421 complement(1728274..1728723) 1 NC_010407.1 hypothetical protein 1728723 6157421 CMS_1639 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710362.1 1728274 R 31964 CDS YP_001710363.1 170782031 6157422 1728762..1729232 1 NC_010407.1 deoxyuridine 5'-triphosphate nucleotidohydrolase 1729232 dut 6157422 dut Clavibacter michiganensis subsp. sepedonicus deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001710363.1 1728762 D 31964 CDS YP_001710364.1 170782032 6158672 1729229..1729921 1 NC_010407.1 hypothetical protein 1729921 6158672 CMS_1641 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710364.1 1729229 D 31964 CDS YP_001710365.1 170782033 6157423 1729924..1730730 1 NC_010407.1 hypothetical protein 1730730 6157423 CMS_1642 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710365.1 1729924 D 31964 CDS YP_001710366.1 170782034 6157424 1730910..1733774 1 NC_010407.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1733774 acnA 6157424 acnA Clavibacter michiganensis subsp. sepedonicus aconitate hydratase YP_001710366.1 1730910 D 31964 CDS YP_001710367.1 170782035 6158588 1733890..1735842 1 NC_010407.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1735842 dxs 6158588 dxs Clavibacter michiganensis subsp. sepedonicus 1-deoxy-D-xylulose-5-phosphate synthase YP_001710367.1 1733890 D 31964 CDS YP_001710368.1 170782036 6158674 complement(1735906..1738035) 1 NC_010407.1 fatty acid oxidation complex subunit alpha 1738035 fadB 6158674 fadB Clavibacter michiganensis subsp. sepedonicus fatty acid oxidation complex subunit alpha YP_001710368.1 1735906 R 31964 CDS YP_001710369.1 170782037 6158683 complement(1738032..1739213) 1 NC_010407.1 3-ketoacyl-CoA thiolase 1739213 fadA 6158683 fadA Clavibacter michiganensis subsp. sepedonicus 3-ketoacyl-CoA thiolase YP_001710369.1 1738032 R 31964 CDS YP_001710370.1 170782038 6158682 complement(1739313..1740644) 1 NC_010407.1 N-terminal extension relative to homologues predicted by Frameplot; ribonuclease 1740644 6158682 CMS_1647 Clavibacter michiganensis subsp. sepedonicus ribonuclease YP_001710370.1 1739313 R 31964 CDS YP_001710371.1 170782039 6157425 complement(1740785..1741291) 1 NC_010407.1 hypothetical protein 1741291 6157425 CMS_1648 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710371.1 1740785 R 31964 CDS YP_001710372.1 170782040 6157426 complement(1741472..1742218) 1 NC_010407.1 hydrolase 1742218 6157426 CMS_1649 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710372.1 1741472 R 31964 CDS YP_001710373.1 170782041 6157427 complement(1742215..1742655) 1 NC_010407.1 hypothetical protein 1742655 6157427 CMS_1650 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710373.1 1742215 R 31964 CDS YP_001710374.1 170782042 6157428 complement(1742652..1743563) 1 NC_010407.1 thiosulfate sulfurtransferase 1743563 thtR 6157428 thtR Clavibacter michiganensis subsp. sepedonicus thiosulfate sulfurtransferase YP_001710374.1 1742652 R 31964 CDS YP_001710375.1 170782043 6159017 1743732..1744796 1 NC_010407.1 ATPase 1744796 6159017 CMS_1652 Clavibacter michiganensis subsp. sepedonicus ATPase YP_001710375.1 1743732 D 31964 CDS YP_001710376.1 170782044 6157429 1745048..1746334 1 NC_010407.1 ammonium transporter 1746334 6157429 CMS_1653 Clavibacter michiganensis subsp. sepedonicus ammonium transporter YP_001710376.1 1745048 D 31964 CDS YP_001710377.1 170782045 6157430 1746528..1747367 1 NC_010407.1 aldo/keto reductase 1747367 6157430 CMS_1654 Clavibacter michiganensis subsp. sepedonicus aldo/keto reductase YP_001710377.1 1746528 D 31964 CDS YP_001710378.1 170782046 6157432 1748035..1748859 1 NC_010407.1 HemK family methyltransferase 1748859 6157432 CMS_1656 Clavibacter michiganensis subsp. sepedonicus HemK family methyltransferase YP_001710378.1 1748035 D 31964 CDS YP_001710379.1 170782047 6157433 1749215..1750177 1 NC_010407.1 Nu/R/C?; insertion element IS1121 transposase 1750177 6157433 CMS_1658 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710379.1 1749215 D 31964 CDS YP_001710380.1 170782048 6157434 1750224..1750727 1 NC_010407.1 hypothetical protein 1750727 6157434 CMS_1659 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710380.1 1750224 D 31964 CDS YP_001710381.1 170782049 6157435 complement(1750714..1751721) 1 NC_010407.1 substrate binding transport protein 1751721 6157435 CMS_1660 Clavibacter michiganensis subsp. sepedonicus substrate binding transport protein YP_001710381.1 1750714 R 31964 CDS YP_001710382.1 170782050 6157436 complement(1751724..1752398) 1 NC_010407.1 ATP-binding integral membrane transport protein 1752398 6157436 CMS_1661 Clavibacter michiganensis subsp. sepedonicus ATP-binding integral membrane transport protein YP_001710382.1 1751724 R 31964 CDS YP_001710383.1 170782051 6157437 complement(1752485..1753639) 1 NC_010407.1 ABC transporter ATP-binding protein 1753639 6157437 CMS_1662 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001710383.1 1752485 R 31964 CDS YP_001710384.1 170782052 6157438 complement(1753767..1754408) 1 NC_010407.1 transport protein 1754408 6157438 CMS_1663 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710384.1 1753767 R 31964 CDS YP_001710385.1 170782053 6157439 1754660..1756000 1 NC_010407.1 hypothetical protein 1756000 6157439 CMS_1664 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710385.1 1754660 D 31964 CDS YP_001710386.1 170782054 6157440 complement(1756040..1757005) 1 NC_010407.1 oxidoreductase 1757005 6157440 CMS_1665 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710386.1 1756040 R 31964 CDS YP_001710387.1 170782055 6157441 complement(1757050..1758066) 1 NC_010407.1 metal ion transport protein 1758066 6157441 CMS_1666 Clavibacter michiganensis subsp. sepedonicus metal ion transport protein YP_001710387.1 1757050 R 31964 CDS YP_001710388.1 170782056 6159048 1758392..1759702 1 NC_010407.1 hypothetical protein 1759702 6159048 CMS_1667 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710388.1 1758392 D 31964 CDS YP_001710389.1 170782057 6157443 1759844..1760563 1 NC_010407.1 phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1760563 6157443 CMS_1668 Clavibacter michiganensis subsp. sepedonicus undecaprenyl pyrophosphate phosphatase YP_001710389.1 1759844 D 31964 CDS YP_001710390.1 170782058 6157444 1760628..1761857 1 NC_010407.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1761857 cysS 6157444 cysS Clavibacter michiganensis subsp. sepedonicus cysteinyl-tRNA synthetase YP_001710390.1 1760628 D 31964 CDS YP_001710391.1 170782059 6158651 complement(1761952..1762911) 1 NC_010407.1 hypothetical protein 1762911 6158651 CMS_1670 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710391.1 1761952 R 31964 CDS YP_001710392.1 170782060 6157445 1763004..1763702 1 NC_010407.1 hydrolase 1763702 6157445 CMS_1671 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710392.1 1763004 D 31964 CDS YP_001710393.1 170782061 6157446 1763699..1764763 1 NC_010407.1 methyltransferase 1764763 6157446 CMS_1672 Clavibacter michiganensis subsp. sepedonicus methyltransferase YP_001710393.1 1763699 D 31964 CDS YP_001710394.1 170782062 6157447 1764825..1765868 1 NC_010407.1 exported ATP-binding protein 1765868 6157447 CMS_1673 Clavibacter michiganensis subsp. sepedonicus exported ATP-binding protein YP_001710394.1 1764825 D 31964 CDS YP_001710395.1 170782063 6157448 1765893..1766924 1 NC_010407.1 hypothetical protein 1766924 6157448 CMS_1674 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710395.1 1765893 D 31964 CDS YP_001710396.1 170782064 6157449 1766921..1767910 1 NC_010407.1 DNA-binding protein 1767910 6157449 CMS_1675 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710396.1 1766921 D 31964 CDS YP_001710397.1 170782065 6157450 1768101..1768466 1 NC_010407.1 Sec-independent protein translocase protein TatA 1768466 tatA 6157450 tatA Clavibacter michiganensis subsp. sepedonicus Sec-independent protein translocase protein TatA YP_001710397.1 1768101 D 31964 CDS YP_001710398.1 170782066 6159007 1768521..1769273 1 NC_010407.1 Sec-independent protein translocase protein TatC 1769273 tatC 6159007 tatC Clavibacter michiganensis subsp. sepedonicus Sec-independent protein translocase protein TatC YP_001710398.1 1768521 D 31964 CDS YP_001710399.1 170782067 6159009 1769368..1771839 1 NC_010407.1 helicase 1771839 6159009 CMS_1678 Clavibacter michiganensis subsp. sepedonicus helicase YP_001710399.1 1769368 D 31964 CDS YP_001710400.1 170782068 6157451 1771836..1773431 1 NC_010407.1 apolipoprotein N-acyltransferase 1773431 lnt 6157451 lnt Clavibacter michiganensis subsp. sepedonicus apolipoprotein N-acyltransferase YP_001710400.1 1771836 D 31964 CDS YP_001710401.1 170782069 6158797 complement(1773523..1773873) 1 NC_010407.1 hypothetical protein 1773873 6158797 CMS_1680 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710401.1 1773523 R 31964 CDS YP_001710402.1 170782070 6157452 complement(1773949..1774737) 1 NC_010407.1 phosphodiesterase 1774737 6157452 CMS_1681 Clavibacter michiganensis subsp. sepedonicus phosphodiesterase YP_001710402.1 1773949 R 31964 CDS YP_001710403.1 170782071 6157453 complement(1774734..1775051) 1 NC_010407.1 hypothetical protein 1775051 6157453 CMS_1682 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710403.1 1774734 R 31964 CDS YP_001710404.1 170782072 6157454 1775227..1776006 1 NC_010407.1 short chain dehydrogenase 1776006 6157454 CMS_1683 Clavibacter michiganensis subsp. sepedonicus short chain dehydrogenase YP_001710404.1 1775227 D 31964 CDS YP_001710405.1 170782073 6157455 1776142..1778133 1 NC_010407.1 peptidase 1778133 6157455 CMS_1684 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001710405.1 1776142 D 31964 CDS YP_001710406.1 170782074 6157456 1778130..1778600 1 NC_010407.1 hypothetical protein 1778600 6157456 CMS_1685 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710406.1 1778130 D 31964 CDS YP_001710407.1 170782075 6157457 1778672..1779307 1 NC_010407.1 hypothetical protein 1779307 6157457 CMS_1686 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710407.1 1778672 D 31964 CDS YP_001710408.1 170782076 6157458 1779365..1780252 1 NC_010407.1 exported lipase 1780252 lip 6157458 lip Clavibacter michiganensis subsp. sepedonicus exported lipase YP_001710408.1 1779365 D 31964 CDS YP_001710409.1 170782077 6158794 1780435..1780929 1 NC_010407.1 hypothetical protein 1780929 6158794 CMS_1688 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710409.1 1780435 D 31964 CDS YP_001710410.1 170782078 6157459 complement(1781079..1781348) 1 NC_010407.1 hypothetical protein 1781348 6157459 CMS_1689 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710410.1 1781079 R 31964 CDS YP_001710411.1 170782079 6157460 1781456..1782493 1 NC_010407.1 LacI family transcriptional regulator 1782493 6157460 CMS_1690 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001710411.1 1781456 D 31964 CDS YP_001710412.1 170782080 6157461 complement(1782515..1784161) 1 NC_010407.1 xylosidase/arabinosidase 1784161 6157461 CMS_1691 Clavibacter michiganensis subsp. sepedonicus xylosidase/arabinosidase YP_001710412.1 1782515 R 31964 CDS YP_001710413.1 170782081 6157462 1784339..1785634 1 NC_010407.1 substrate-binding transport 1785634 6157462 CMS_1692 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport YP_001710413.1 1784339 D 31964 CDS YP_001710415.1 170782082 6157466 1790148..1790474 1 NC_010407.1 hypothetical protein 1790474 6157466 CMS_1696 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710415.1 1790148 D 31964 CDS YP_001710416.1 170782083 6157468 complement(1793927..1796191) 1 NC_010407.1 glycosyl hydrolase 1796191 6157468 CMS_1701 Clavibacter michiganensis subsp. sepedonicus glycosyl hydrolase YP_001710416.1 1793927 R 31964 CDS YP_001710417.1 170782084 6157469 1796470..1797810 1 NC_010407.1 transport protein 1797810 6157469 CMS_1702 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710417.1 1796470 D 31964 CDS YP_001710418.1 170782085 6157470 1797810..1800548 1 NC_010407.1 glycosyl hydrolase 1800548 6157470 CMS_1703 Clavibacter michiganensis subsp. sepedonicus glycosyl hydrolase YP_001710418.1 1797810 D 31964 CDS YP_001710419.1 170782086 6157471 1800641..1801621 1 NC_010407.1 LacI family transcriptional regulator 1801621 6157471 CMS_1704 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001710419.1 1800641 D 31964 CDS YP_001710420.1 170782087 6157472 1801743..1804370 1 NC_010407.1 glycosyl hydrolase 1804370 6157472 CMS_1705 Clavibacter michiganensis subsp. sepedonicus glycosyl hydrolase YP_001710420.1 1801743 D 31964 CDS YP_001710421.1 170782088 6157474 complement(1805274..1805591) 1 NC_010407.1 tandem duplication with upstream CDS; efflux protein 1805591 6157474 CMS_1707 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001710421.1 1805274 R 31964 CDS YP_001710422.1 170782089 6157475 complement(1805591..1805932) 1 NC_010407.1 tandem duplication with downstream CDS; efflux protein 1805932 6157475 CMS_1708 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001710422.1 1805591 R 31964 CDS YP_001710423.1 170782090 6157476 complement(1805941..1806468) 1 NC_010407.1 TetR family transcriptional regulator 1806468 6157476 CMS_1709 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001710423.1 1805941 R 31964 CDS YP_001710424.1 170782091 6157477 1807294..1808952 1 NC_010407.1 pyridine nucleotide-disulphide oxidoreductase 1808952 6157477 CMS_1711 Clavibacter michiganensis subsp. sepedonicus pyridine nucleotide-disulphide oxidoreductase YP_001710424.1 1807294 D 31964 CDS YP_001710425.1 170782092 6157478 1808968..1809267 1 NC_010407.1 Appear to be a duplication of the C-terminal portion of the upstream CDS; hypothetical protein 1809267 6157478 CMS_1712 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710425.1 1808968 D 31964 CDS YP_001710426.1 170782093 6157479 1809264..1809563 1 NC_010407.1 hypothetical protein 1809563 6157479 CMS_1713 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710426.1 1809264 D 31964 CDS YP_001710427.1 170782094 6157482 complement(1810902..1811771) 1 NC_010407.1 hypothetical protein 1811771 6157482 CMS_1718 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710427.1 1810902 R 31964 CDS YP_001710428.1 170782095 6157483 complement(1812122..1813084) 1 NC_010407.1 N/R; insertion element IS1121 transposase 1813084 6157483 CMS_1720 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710428.1 1812122 R 31964 CDS YP_001710429.1 170782096 6157484 1813195..1813626 1 NC_010407.1 hypothetical protein 1813626 6157484 CMS_1721 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710429.1 1813195 D 31964 CDS YP_001710430.1 170782097 6157485 complement(1813685..1815070) 1 NC_010407.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 1815070 glyQS 6157485 glyQS Clavibacter michiganensis subsp. sepedonicus glycyl-tRNA synthetase YP_001710430.1 1813685 R 31964 CDS YP_001710431.1 170782098 6158729 complement(1815182..1816216) 1 NC_010407.1 oxidoreductase 1816216 6158729 CMS_1723 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710431.1 1815182 R 31964 CDS YP_001710432.1 170782099 6157486 complement(1816301..1817167) 1 NC_010407.1 undecaprenyl phosphate synthetase 1817167 uppS 6157486 uppS Clavibacter michiganensis subsp. sepedonicus undecaprenyl phosphate synthetase YP_001710432.1 1816301 R 31964 CDS YP_001710433.1 170782100 6159087 complement(1817164..1818093) 1 NC_010407.1 DNA repair protein RecO 1818093 recO 6159087 recO Clavibacter michiganensis subsp. sepedonicus DNA repair protein RecO YP_001710433.1 1817164 R 31964 CDS YP_001710434.1 170782101 6158924 1818212..1818889 1 NC_010407.1 hypothetical protein 1818889 6158924 CMS_1726 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710434.1 1818212 D 31964 CDS YP_001710435.1 170782102 6157487 complement(1818999..1820765) 1 NC_010407.1 2-isopropylmalate synthase 1820765 leuA 6157487 leuA Clavibacter michiganensis subsp. sepedonicus 2-isopropylmalate synthase YP_001710435.1 1818999 R 31964 CDS YP_001710436.1 170782103 6158784 complement(1820932..1823496) 1 NC_010407.1 hypothetical protein 1823496 6158784 CMS_1728 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710436.1 1820932 R 31964 CDS YP_001710437.1 170782104 6157488 complement(1823493..1824896) 1 NC_010407.1 hypothetical protein 1824896 6157488 CMS_1729 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710437.1 1823493 R 31964 CDS YP_001710438.1 170782105 6157489 complement(1824977..1825663) 1 NC_010407.1 two component system response regulator 1825663 6157489 CMS_1730 Clavibacter michiganensis subsp. sepedonicus two component system response regulator YP_001710438.1 1824977 R 31964 CDS YP_001710439.1 170782106 6157490 complement(1825714..1827216) 1 NC_010407.1 two component sensor kinase 1827216 6157490 CMS_1731 Clavibacter michiganensis subsp. sepedonicus two component sensor kinase YP_001710439.1 1825714 R 31964 CDS YP_001710440.1 170782107 6157491 complement(1827327..1828406) 1 NC_010407.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1828406 era 6157491 era Clavibacter michiganensis subsp. sepedonicus GTP-binding protein Era YP_001710440.1 1827327 R 31964 CDS YP_001710441.1 170782108 6157492 complement(1828399..1829721) 1 NC_010407.1 hypothetical protein 1829721 6157492 CMS_1733 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710441.1 1828399 R 31964 CDS YP_001710442.1 170782109 6157493 complement(1829731..1830192) 1 NC_010407.1 metalloprotease 1830192 6157493 CMS_1734 Clavibacter michiganensis subsp. sepedonicus metalloprotease YP_001710442.1 1829731 R 31964 CDS YP_001710443.1 170782110 6157494 complement(1830189..1831238) 1 NC_010407.1 PhoH-like protein 1831238 6157494 CMS_1735 Clavibacter michiganensis subsp. sepedonicus PhoH-like protein YP_001710443.1 1830189 R 31964 CDS YP_001710444.1 170782111 6157495 complement(1831225..1831581) 1 NC_010407.1 Hit-family protein 1831581 6157495 CMS_1736 Clavibacter michiganensis subsp. sepedonicus Hit-family protein YP_001710444.1 1831225 R 31964 CDS YP_001710445.2 228861774 6157496 complement(1831610..1832374) 1 NC_010407.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1832374 6157496 CMS_1737 Clavibacter michiganensis subsp. sepedonicus 16S ribosomal RNA methyltransferase RsmE YP_001710445.2 1831610 R 31964 CDS YP_001710446.1 170782113 6157497 complement(1832377..1833492) 1 NC_010407.1 DnaJ chaperone protein 1833492 6157497 CMS_1738 Clavibacter michiganensis subsp. sepedonicus DnaJ chaperone protein YP_001710446.1 1832377 R 31964 CDS YP_001710447.1 170782114 6158759 1834763..1835158 1 NC_010407.1 hypothetical protein 1835158 6158759 CMS_1740 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710447.1 1834763 D 31964 CDS YP_001710448.1 170782115 6157499 1835181..1835582 1 NC_010407.1 hypothetical protein 1835582 6157499 CMS_1741 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710448.1 1835181 D 31964 CDS YP_001710449.1 170782116 6157500 complement(1835597..1836820) 1 NC_010407.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1836820 hemN 6157500 hemN Clavibacter michiganensis subsp. sepedonicus coproporphyrinogen III oxidase YP_001710449.1 1835597 R 31964 CDS YP_001710450.1 170782117 6158747 1836903..1837604 1 NC_010407.1 hydrolase 1837604 6158747 CMS_1743 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710450.1 1836903 D 31964 CDS YP_001710451.1 170782118 6157501 complement(1837626..1838207) 1 NC_010407.1 hypothetical protein 1838207 6157501 CMS_1744 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710451.1 1837626 R 31964 CDS YP_001710452.1 170782119 6157502 1838694..1839467 1 NC_010407.1 one of 4 tandemly repeated diveregnt CDSs; hypothetical protein 1839467 6157502 CMS_1745 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710452.1 1838694 D 31964 CDS YP_001710453.1 170782120 6157503 1839524..1840330 1 NC_010407.1 one of 4 tandemly repeated diveregnt CDSs; hypothetical protein 1840330 6157503 CMS_1746 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710453.1 1839524 D 31964 CDS YP_001710454.1 170782121 6157504 1840400..1841176 1 NC_010407.1 one of 4 tandemly repeated diveregnt CDSs; hypothetical protein 1841176 6157504 CMS_1747 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710454.1 1840400 D 31964 CDS YP_001710455.1 170782122 6157505 1841277..1842104 1 NC_010407.1 one of 4 tandemly repeated diveregnt CDSs; hypothetical protein 1842104 6157505 CMS_1748 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710455.1 1841277 D 31964 CDS YP_001710456.1 170782123 6157506 complement(1842175..1844022) 1 NC_010407.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1844022 lepA 6157506 lepA Clavibacter michiganensis subsp. sepedonicus GTP-binding protein LepA YP_001710456.1 1842175 R 31964 CDS YP_001710457.1 170782124 6158783 complement(1844122..1844745) 1 NC_010407.1 hypothetical protein 1844745 6158783 CMS_1750 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710457.1 1844122 R 31964 CDS YP_001710458.1 170782125 6157507 complement(1844909..1845520) 1 NC_010407.1 sigma factor 1845520 6157507 CMS_1751 Clavibacter michiganensis subsp. sepedonicus sigma factor YP_001710458.1 1844909 R 31964 CDS YP_001710459.1 170782126 6157508 complement(1845566..1846543) 1 NC_010407.1 DNA-binding protein 1846543 6157508 CMS_1752 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710459.1 1845566 R 31964 CDS YP_001710460.1 170782127 6157509 complement(1846540..1847799) 1 NC_010407.1 hypothetical protein 1847799 6157509 CMS_1753 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710460.1 1846540 R 31964 CDS YP_001710461.1 170782128 6157510 1847833..1848399 1 NC_010407.1 NUDIX hydrolase 1848399 6157510 CMS_1754 Clavibacter michiganensis subsp. sepedonicus NUDIX hydrolase YP_001710461.1 1847833 D 31964 CDS YP_001710462.1 170782129 6157511 1848535..1848798 1 NC_010407.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1848798 rpsT 6157511 rpsT Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S20 YP_001710462.1 1848535 D 31964 CDS YP_001710463.1 170782130 6158970 complement(1848911..1849939) 1 NC_010407.1 DNA-binding protein 1849939 6158970 CMS_1756 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710463.1 1848911 R 31964 CDS YP_001710464.1 170782131 6157513 complement(1851801..1852868) 1 NC_010407.1 DNA-binding/transport protein 1852868 6157513 CMS_1758 Clavibacter michiganensis subsp. sepedonicus DNA-binding/transport protein YP_001710464.1 1851801 R 31964 CDS YP_001710465.1 170782132 6157514 complement(1853039..1854088) 1 NC_010407.1 hypothetical protein 1854088 6157514 CMS_1759 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710465.1 1853039 R 31964 CDS YP_001710466.1 170782133 6157515 complement(1854448..1857006) 1 NC_010407.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1857006 leuS 6157515 leuS Clavibacter michiganensis subsp. sepedonicus leucyl-tRNA synthetase YP_001710466.1 1854448 R 31964 CDS YP_001710467.1 170782134 6158788 complement(1857105..1858574) 1 NC_010407.1 anthranilate synthase component I 1858574 trpE 6158788 trpE Clavibacter michiganensis subsp. sepedonicus anthranilate synthase component I YP_001710467.1 1857105 R 31964 CDS YP_001710468.1 170782135 6159075 1858733..1859446 1 NC_010407.1 hypothetical protein 1859446 6159075 CMS_1762 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710468.1 1858733 D 31964 CDS YP_001710469.1 170782136 6157516 complement(1859478..1861148) 1 NC_010407.1 ABC transporter ATP-binding subunit 1861148 6157516 CMS_1763 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710469.1 1859478 R 31964 CDS YP_001710470.1 170782137 6157517 complement(1861145..1862890) 1 NC_010407.1 ABC transporter ATP-binding subunit 1862890 6157517 CMS_1764 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710470.1 1861145 R 31964 CDS YP_001710471.1 170782138 6157518 complement(join(1862912..1863862,1863864..1863875)) 1 NC_010407.1 Nu; insertion element IS1121 transposase 1863875 6157518 CMS_1765 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710471.1 1862912 R 31964 CDS YP_001710472.1 170782139 6157519 complement(1863973..1864977) 1 NC_010407.1 cytochrome D ubiquinol oxidase subunit II 1864977 cydB 6157519 cydB Clavibacter michiganensis subsp. sepedonicus cytochrome D ubiquinol oxidase subunit II YP_001710472.1 1863973 R 31964 CDS YP_001710473.1 170782140 6158647 complement(1864977..1866389) 1 NC_010407.1 cytochrome D ubiquinol oxidase subunit I 1866389 cydA 6158647 cydA Clavibacter michiganensis subsp. sepedonicus cytochrome D ubiquinol oxidase subunit I YP_001710473.1 1864977 R 31964 CDS YP_001710474.1 170782141 6158646 1866769..1867209 1 NC_010407.1 hypothetical protein 1867209 6158646 CMS_1768 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710474.1 1866769 D 31964 CDS YP_001710475.1 170782142 6157520 complement(1867514..1868098) 1 NC_010407.1 acetyltransferase 1868098 6157520 CMS_1769 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001710475.1 1867514 R 31964 CDS YP_001710476.1 170782143 6157521 1868102..1868572 1 NC_010407.1 acetyltransferase 1868572 6157521 CMS_1770 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001710476.1 1868102 D 31964 CDS YP_001710477.1 170782144 6157522 1868569..1869414 1 NC_010407.1 transferase 1869414 6157522 CMS_1771 Clavibacter michiganensis subsp. sepedonicus transferase YP_001710477.1 1868569 D 31964 CDS YP_001710478.1 170782145 6157523 complement(1869407..1870597) 1 NC_010407.1 oxygenase 1870597 6157523 CMS_1772 Clavibacter michiganensis subsp. sepedonicus oxygenase YP_001710478.1 1869407 R 31964 CDS YP_001710479.1 170782146 6157524 complement(1870597..1871316) 1 NC_010407.1 hypothetical protein 1871316 6157524 CMS_1772A Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710479.1 1870597 R 31964 CDS YP_001710480.1 170782147 6157525 complement(1871316..1872503) 1 NC_010407.1 chalcone synthase 1872503 6157525 CMS_1773 Clavibacter michiganensis subsp. sepedonicus chalcone synthase YP_001710480.1 1871316 R 31964 CDS YP_001710481.1 170782148 6157526 complement(1872533..1873051) 1 NC_010407.1 hypothetical protein 1873051 6157526 CMS_1774 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710481.1 1872533 R 31964 CDS YP_001710482.1 170782149 6157527 complement(1873126..1874052) 1 NC_010407.1 substrate-binding transport protein 1874052 6157527 CMS_1774A Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001710482.1 1873126 R 31964 CDS YP_001710483.1 170782150 6157528 complement(1874067..1874792) 1 NC_010407.1 transport protein 1874792 6157528 CMS_1774B Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710483.1 1874067 R 31964 CDS YP_001710484.1 170782151 6157529 complement(1874789..1875487) 1 NC_010407.1 transport protein 1875487 6157529 CMS_1775 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710484.1 1874789 R 31964 CDS YP_001710485.1 170782152 6157530 complement(1875484..1876389) 1 NC_010407.1 ABC transporter ATP-binding subunit 1876389 6157530 CMS_1776 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710485.1 1875484 R 31964 CDS YP_001710486.1 170782153 6157531 1876573..1877313 1 NC_010407.1 hypothetical protein 1877313 6157531 CMS_1777 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710486.1 1876573 D 31964 CDS YP_001710487.1 170782154 6157532 1877422..1878450 1 NC_010407.1 hypothetical protein 1878450 6157532 CMS_1778 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710487.1 1877422 D 31964 CDS YP_001710488.1 170782155 6157533 complement(1878521..1879387) 1 NC_010407.1 oxidoreductase 1879387 6157533 CMS_1779 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710488.1 1878521 R 31964 CDS YP_001710489.1 170782156 6157534 1879642..1879965 1 NC_010407.1 hypothetical protein 1879965 6157534 CMS_1780 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710489.1 1879642 D 31964 CDS YP_001710490.1 170782157 6157535 1880147..1880845 1 NC_010407.1 transport protein 1880845 6157535 CMS_1781 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710490.1 1880147 D 31964 CDS YP_001710491.1 170782158 6157536 complement(1880895..1882220) 1 NC_010407.1 transcriptional regulator 1882220 6157536 CMS_1782 Clavibacter michiganensis subsp. sepedonicus transcriptional regulator YP_001710491.1 1880895 R 31964 CDS YP_001710492.1 170782159 6157537 complement(1882271..1883035) 1 NC_010407.1 hydrolase 1883035 6157537 CMS_1783 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710492.1 1882271 R 31964 CDS YP_001710493.1 170782160 6157538 complement(1883134..1884501) 1 NC_010407.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1884501 zwf 6157538 zwf Clavibacter michiganensis subsp. sepedonicus glucose-6-phosphate 1-dehydrogenase YP_001710493.1 1883134 R 31964 CDS YP_001710494.1 170782161 6157539 1888095..1889138 1 NC_010407.1 hypothetical protein 1889138 6157539 CMS_1786 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710494.1 1888095 D 31964 CDS YP_001710495.1 170782162 6157540 1889135..1890067 1 NC_010407.1 hydrolase 1890067 6157540 CMS_1787 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710495.1 1889135 D 31964 CDS YP_001710496.1 170782163 6157541 1890208..1891230 1 NC_010407.1 hydrolase 1891230 6157541 CMS_1788 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710496.1 1890208 D 31964 CDS YP_001710497.1 170782164 6157543 1892057..1893034 1 NC_010407.1 alcohol dehydrogenase 1893034 6157543 CMS_1790 Clavibacter michiganensis subsp. sepedonicus alcohol dehydrogenase YP_001710497.1 1892057 D 31964 CDS YP_001710498.1 170782165 6157544 complement(1893031..1893993) 1 NC_010407.1 N; insertion element ISCmi2 transposase 1893993 6157544 CMS_1791 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710498.1 1893031 R 31964 CDS YP_001710499.1 170782166 6157545 complement(1894090..1895511) 1 NC_010407.1 efflux protein 1895511 6157545 CMS_1792 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001710499.1 1894090 R 31964 CDS YP_001710500.1 170782167 6157546 complement(1895582..1896316) 1 NC_010407.1 hypothetical protein 1896316 6157546 CMS_1793 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710500.1 1895582 R 31964 CDS YP_001710501.1 170782168 6157547 complement(1896384..1897313) 1 NC_010407.1 hydrolase 1897313 6157547 CMS_1794 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710501.1 1896384 R 31964 CDS YP_001710502.1 170782169 6157548 1897398..1898531 1 NC_010407.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1898531 hisC 6157548 hisC Clavibacter michiganensis subsp. sepedonicus histidinol-phosphate aminotransferase YP_001710502.1 1897398 D 31964 CDS YP_001710503.1 170782170 6158750 complement(1898569..1899498) 1 NC_010407.1 oxidoreductase 1899498 6158750 CMS_1796 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710503.1 1898569 R 31964 CDS YP_001710504.1 170782171 6157549 complement(1899495..1902080) 1 NC_010407.1 helicase 1902080 6157549 CMS_1797 Clavibacter michiganensis subsp. sepedonicus helicase YP_001710504.1 1899495 R 31964 CDS YP_001710505.1 170782172 6157550 1902123..1902386 1 NC_010407.1 hypothetical protein 1902386 6157550 CMS_1798 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710505.1 1902123 D 31964 CDS YP_001710506.1 170782173 6157551 1902457..1904043 1 NC_010407.1 oxidoreductase 1904043 6157551 CMS_1799 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710506.1 1902457 D 31964 CDS YP_001710507.1 170782174 6157552 complement(1904118..1904390) 1 NC_010407.1 phosphocarrier protein Hpr 1904390 ptsH 6157552 ptsH Clavibacter michiganensis subsp. sepedonicus phosphocarrier protein Hpr YP_001710507.1 1904118 R 31964 CDS YP_001710508.1 170782175 6158891 complement(1904436..1906484) 1 NC_010407.1 PTS system D-fructose-specific transporter subunit IIBC 1906484 fruA 6158891 fruA Clavibacter michiganensis subsp. sepedonicus PTS system D-fructose-specific transporter subunit IIBC YP_001710508.1 1904436 R 31964 CDS YP_001710509.1 170782176 6158694 complement(1906507..1907478) 1 NC_010407.1 1-phosphofructokinase 1907478 6158694 CMS_1802 Clavibacter michiganensis subsp. sepedonicus 1-phosphofructokinase YP_001710509.1 1906507 R 31964 CDS YP_001710510.1 170782177 6157553 complement(1907475..1908206) 1 NC_010407.1 DeoR family transcriptional regulator 1908206 6157553 CMS_1803 Clavibacter michiganensis subsp. sepedonicus DeoR family transcriptional regulator YP_001710510.1 1907475 R 31964 CDS YP_001710511.1 170782178 6157554 complement(1908399..1909427) 1 NC_010407.1 hydrolase 1909427 6157554 CMS_1804 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710511.1 1908399 R 31964 CDS YP_001710512.1 170782179 6157555 complement(1909470..1909844) 1 NC_010407.1 hypothetical protein 1909844 6157555 CMS_1805 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710512.1 1909470 R 31964 CDS YP_001710513.1 170782180 6157556 1909898..1910836 1 NC_010407.1 hypothetical protein 1910836 6157556 CMS_1806 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710513.1 1909898 D 31964 CDS YP_001710514.1 170782181 6159028 complement(1911112..1911507) 1 NC_010407.1 hypothetical protein 1911507 6159028 CMS_1807 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710514.1 1911112 R 31964 CDS YP_001710515.1 170782182 6157558 complement(1911590..1911967) 1 NC_010407.1 hypothetical protein 1911967 6157558 CMS_1808 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710515.1 1911590 R 31964 CDS YP_001710516.1 170782183 6157559 complement(1912007..1913551) 1 NC_010407.1 membrane anchored protein 1913551 6157559 CMS_1809 Clavibacter michiganensis subsp. sepedonicus membrane anchored protein YP_001710516.1 1912007 R 31964 CDS YP_001710517.1 170782184 6157560 complement(1913548..1914150) 1 NC_010407.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 1914150 nadD 6157560 nadD Clavibacter michiganensis subsp. sepedonicus nicotinic acid mononucleotide adenylyltransferase YP_001710517.1 1913548 R 31964 CDS YP_001710518.1 170782185 6158836 complement(1914168..1914383) 1 NC_010407.1 hypothetical protein 1914383 6158836 CMS_1811 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710518.1 1914168 R 31964 CDS YP_001710519.1 170782186 6157561 complement(1914482..1915843) 1 NC_010407.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1915843 proA 6157561 proA Clavibacter michiganensis subsp. sepedonicus gamma-glutamyl phosphate reductase YP_001710519.1 1914482 R 31964 CDS YP_001710520.1 170782187 6158882 complement(1915849..1916628) 1 NC_010407.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1916628 proB 6158882 proB Clavibacter michiganensis subsp. sepedonicus gamma-glutamyl kinase YP_001710520.1 1915849 R 31964 CDS YP_001710521.1 170782188 6158883 complement(1916632..1918185) 1 NC_010407.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1918185 obgE 6158883 obgE Clavibacter michiganensis subsp. sepedonicus GTPase ObgE YP_001710521.1 1916632 R 31964 CDS YP_001710522.1 170782189 6157562 complement(1918305..1918559) 1 NC_010407.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1918559 rpmA 6157562 rpmA Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L27 YP_001710522.1 1918305 R 31964 CDS YP_001710523.1 170782190 6158954 complement(1918584..1918892) 1 NC_010407.1 50S ribosomal protein L21 1918892 rplU 6158954 rplU Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L21 YP_001710523.1 1918584 R 31964 CDS YP_001710524.1 170782191 6158951 1919184..1919462 1 NC_010407.1 hypothetical protein 1919462 6158951 CMS_1817 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710524.1 1919184 D 31964 CDS YP_001710525.1 170782192 6157563 complement(1919552..1922599) 1 NC_010407.1 ribonuclease 1922599 6157563 CMS_1818 Clavibacter michiganensis subsp. sepedonicus ribonuclease YP_001710525.1 1919552 R 31964 CDS YP_001710526.1 170782193 6157564 1922905..1923513 1 NC_010407.1 hypothetical protein 1923513 6157564 CMS_1819 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710526.1 1922905 D 31964 CDS YP_001710527.1 170782194 6157565 complement(1923576..1923995) 1 NC_010407.1 nucleoside diphosphate kinase 1923995 ndk 6157565 ndk Clavibacter michiganensis subsp. sepedonicus nucleoside diphosphate kinase YP_001710527.1 1923576 R 31964 CDS YP_001710528.1 170782195 6158840 complement(1924005..1924508) 1 NC_010407.1 hypothetical protein 1924508 6158840 CMS_1821 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710528.1 1924005 R 31964 CDS YP_001710529.1 170782196 6157566 complement(1924505..1926079) 1 NC_010407.1 folylpolyglutamate synthase 1926079 folC 6157566 folC Clavibacter michiganensis subsp. sepedonicus folylpolyglutamate synthase YP_001710529.1 1924505 R 31964 CDS YP_001710530.1 170782197 6158691 complement(1926076..1929381) 1 NC_010407.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 1929381 ileS 6158691 ileS Clavibacter michiganensis subsp. sepedonicus isoleucyl-tRNA synthetase YP_001710530.1 1926076 R 31964 CDS YP_001710531.1 170782198 6158764 complement(1929598..1930545) 1 NC_010407.1 Nu/R; insertion element IS1121/Cmi2 chimera transposase 1930545 6158764 CMS_1824 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121/Cmi2 chimera transposase YP_001710531.1 1929598 R 31964 CDS YP_001710532.1 170782199 6157567 1930770..1931675 1 NC_010407.1 DNA-binding protein 1931675 6157567 CMS_1825 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710532.1 1930770 D 31964 CDS YP_001710533.1 170782200 6157568 complement(1931672..1932343) 1 NC_010407.1 hypothetical protein 1932343 6157568 CMS_1826 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710533.1 1931672 R 31964 CDS YP_001710534.1 170782201 6157569 complement(1932384..1932833) 1 NC_010407.1 hypothetical protein 1932833 6157569 CMS_1827 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710534.1 1932384 R 31964 CDS YP_001710535.1 170782202 6157570 complement(1932830..1934320) 1 NC_010407.1 oxidoreductase 1934320 6157570 CMS_1828 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710535.1 1932830 R 31964 CDS YP_001710536.1 170782203 6157571 complement(1934431..1935192) 1 NC_010407.1 hypothetical protein 1935192 6157571 CMS_1829 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710536.1 1934431 R 31964 CDS YP_001710537.1 170782204 6157572 1935206..1936312 1 NC_010407.1 sugar kinase 1936312 6157572 CMS_1830 Clavibacter michiganensis subsp. sepedonicus sugar kinase YP_001710537.1 1935206 D 31964 CDS YP_001710538.1 170782205 6157573 complement(1936331..1937596) 1 NC_010407.1 transporter 1937596 6157573 CMS_1831 Clavibacter michiganensis subsp. sepedonicus transporter YP_001710538.1 1936331 R 31964 CDS YP_001710539.1 170782206 6157574 1937631..1938332 1 NC_010407.1 hypothetical protein 1938332 6157574 CMS_1832 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710539.1 1937631 D 31964 CDS YP_001710540.1 170782207 6157576 complement(1939157..1939669) 1 NC_010407.1 hypothetical protein 1939669 6157576 CMS_1834 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710540.1 1939157 R 31964 CDS YP_001710541.1 170782208 6157577 complement(1939761..1940693) 1 NC_010407.1 riboflavin kinase 1940693 ribF 6157577 ribF Clavibacter michiganensis subsp. sepedonicus riboflavin kinase YP_001710541.1 1939761 R 31964 CDS YP_001710542.1 170782209 6158934 complement(1940696..1941157) 1 NC_010407.1 hypothetical protein 1941157 6158934 CMS_1836 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710542.1 1940696 R 31964 CDS YP_001710543.1 170782210 6157578 complement(1941196..1941564) 1 NC_010407.1 hypothetical protein 1941564 6157578 CMS_1837 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710543.1 1941196 R 31964 CDS YP_001710544.1 170782211 6157579 complement(1941561..1942520) 1 NC_010407.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1942520 truB 6157579 truB Clavibacter michiganensis subsp. sepedonicus tRNA pseudouridine synthase B YP_001710544.1 1941561 R 31964 CDS YP_001710545.1 170782212 6159078 1942607..1943602 1 NC_010407.1 oxidoreductase 1943602 6159078 CMS_1839 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710545.1 1942607 D 31964 CDS YP_001710546.1 170782213 6157580 complement(1943661..1944227) 1 NC_010407.1 hypothetical protein 1944227 6157580 CMS_1840 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710546.1 1943661 R 31964 CDS YP_001710547.1 170782214 6157581 1944293..1945144 1 NC_010407.1 A/G-specific adenine glycosylase 1945144 mutY 6157581 mutY Clavibacter michiganensis subsp. sepedonicus A/G-specific adenine glycosylase YP_001710547.1 1944293 D 31964 CDS YP_001710548.1 170782215 6158835 complement(1945190..1945702) 1 NC_010407.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1945702 rbfA 6158835 rbfA Clavibacter michiganensis subsp. sepedonicus ribosome-binding factor A YP_001710548.1 1945190 R 31964 CDS YP_001710549.1 170782216 6158920 complement(1946034..1948868) 1 NC_010407.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1948868 infB 6158920 infB Clavibacter michiganensis subsp. sepedonicus translation initiation factor IF-2 YP_001710549.1 1946034 R 31964 CDS YP_001710550.1 170782217 6158771 complement(1949309..1950316) 1 NC_010407.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1950316 nusA 6158771 nusA Clavibacter michiganensis subsp. sepedonicus transcription elongation factor NusA YP_001710550.1 1949309 R 31964 CDS YP_001710551.1 170782218 6158843 complement(1950402..1952174) 1 NC_010407.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1952174 proS 6158843 proS Clavibacter michiganensis subsp. sepedonicus prolyl-tRNA synthetase YP_001710551.1 1950402 R 31964 CDS YP_001710552.1 170782219 6158885 complement(1952206..1953219) 1 NC_010407.1 oxidoreductase 1953219 6158885 CMS_1846 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710552.1 1952206 R 31964 CDS YP_001710553.1 170782220 6157582 complement(1953216..1955858) 1 NC_010407.1 AMP-dependent synthetase/ligase 1955858 6157582 CMS_1847 Clavibacter michiganensis subsp. sepedonicus AMP-dependent synthetase/ligase YP_001710553.1 1953216 R 31964 CDS YP_001710554.1 170782221 6157583 complement(1955905..1956936) 1 NC_010407.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1956936 fabH 6157583 fabH Clavibacter michiganensis subsp. sepedonicus 3-oxoacyl-ACP synthase YP_001710554.1 1955905 R 31964 CDS YP_001710555.1 170782222 6158681 complement(1957043..1958188) 1 NC_010407.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1958188 ispG 6158681 ispG Clavibacter michiganensis subsp. sepedonicus 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001710555.1 1957043 R 31964 CDS YP_001710556.1 170782223 6158775 complement(1958284..1959732) 1 NC_010407.1 metalloprotease 1959732 6158775 CMS_1850 Clavibacter michiganensis subsp. sepedonicus metalloprotease YP_001710556.1 1958284 R 31964 CDS YP_001710557.1 170782224 6157584 1959828..1961093 1 NC_010407.1 serine/threonine-protein kinase 1961093 6157584 CMS_1851 Clavibacter michiganensis subsp. sepedonicus serine/threonine-protein kinase YP_001710557.1 1959828 D 31964 CDS YP_001710558.1 170782225 6157585 1961138..1961767 1 NC_010407.1 hypothetical protein 1961767 6157585 CMS_1852 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710558.1 1961138 D 31964 CDS YP_001710559.1 170782226 6157586 complement(1961965..1963047) 1 NC_010407.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1963047 dxr 6157586 dxr Clavibacter michiganensis subsp. sepedonicus 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001710559.1 1961965 R 31964 CDS YP_001710560.1 170782227 6158673 complement(1963056..1964078) 1 NC_010407.1 peptidyl-prolyl cis-trans isomerase 1964078 6158673 CMS_1854 Clavibacter michiganensis subsp. sepedonicus peptidyl-prolyl cis-trans isomerase YP_001710560.1 1963056 R 31964 CDS YP_001710561.1 170782228 6157587 1964344..1965306 1 NC_010407.1 Nu/R; insertion element ISCmi2 transposase 1965306 6157587 CMS_1855 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710561.1 1964344 D 31964 CDS YP_001710562.1 170782229 6157589 1965995..1966849 1 NC_010407.1 methyltransferase 1966849 6157589 CMS_1858 Clavibacter michiganensis subsp. sepedonicus methyltransferase YP_001710562.1 1965995 D 31964 CDS YP_001710563.1 170782230 6157590 complement(1966875..1967603) 1 NC_010407.1 hypothetical protein 1967603 6157590 CMS_1859 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710563.1 1966875 R 31964 CDS YP_001710564.1 170782231 6157591 1967798..1969555 1 NC_010407.1 cold-shock DEAD-box RNA helicase 1969555 deaD 6157591 deaD Clavibacter michiganensis subsp. sepedonicus cold-shock DEAD-box RNA helicase YP_001710564.1 1967798 D 31964 CDS YP_001710565.1 170782232 6158658 1969726..1971018 1 NC_010407.1 insertion element ISCmi3 transposase 1971018 6158658 CMS_1861 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi3 transposase YP_001710565.1 1969726 D 31964 CDS YP_001710566.1 170782233 6157592 complement(1971117..1971311) 1 NC_010407.1 hypothetical protein 1971311 6157592 CMS_1863 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710566.1 1971117 R 31964 CDS YP_001710567.1 170782234 6157593 complement(1971383..1972006) 1 NC_010407.1 hypothetical protein 1972006 6157593 CMS_1864 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710567.1 1971383 R 31964 CDS YP_001710568.1 170782235 6157594 1972231..1972797 1 NC_010407.1 acetyltransferase 1972797 6157594 CMS_1865 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001710568.1 1972231 D 31964 CDS YP_001710569.1 170782236 6157595 1972779..1973657 1 NC_010407.1 hydrolase 1973657 6157595 CMS_1866 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710569.1 1972779 D 31964 CDS YP_001710570.1 170782237 6157596 complement(1973674..1974990) 1 NC_010407.1 esterase 1974990 6157596 CMS_1867 Clavibacter michiganensis subsp. sepedonicus esterase YP_001710570.1 1973674 R 31964 CDS YP_001710571.1 170782238 6157597 1975068..1975694 1 NC_010407.1 TetR family transcriptional regulator 1975694 6157597 CMS_1868 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001710571.1 1975068 D 31964 CDS YP_001710572.1 170782239 6157598 complement(1975691..1976128) 1 NC_010407.1 protein phosphatase 1976128 6157598 CMS_1869 Clavibacter michiganensis subsp. sepedonicus protein phosphatase YP_001710572.1 1975691 R 31964 CDS YP_001710573.1 170782240 6157599 1976238..1976591 1 NC_010407.1 ArsR family transcriptional regulator 1976591 6157599 CMS_1870 Clavibacter michiganensis subsp. sepedonicus ArsR family transcriptional regulator YP_001710573.1 1976238 D 31964 CDS YP_001710574.1 170782241 6157600 1976588..1977298 1 NC_010407.1 hypothetical protein 1977298 6157600 CMS_1871 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710574.1 1976588 D 31964 CDS YP_001710575.1 170782242 6157602 1980961..1981431 1 NC_010407.1 hypothetical protein 1981431 6157602 CMS_1874 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710575.1 1980961 D 31964 CDS YP_001710576.1 170782243 6157603 complement(1981442..1982104) 1 NC_010407.1 hypothetical protein 1982104 6157603 CMS_1875 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710576.1 1981442 R 31964 CDS YP_001710577.1 170782244 6157604 complement(1982231..1982755) 1 NC_010407.1 hypothetical protein 1982755 6157604 CMS_1876 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710577.1 1982231 R 31964 CDS YP_001710578.1 170782245 6157605 complement(1982752..1983261) 1 NC_010407.1 hypothetical protein 1983261 6157605 CMS_1877 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710578.1 1982752 R 31964 CDS YP_001710579.1 170782246 6157606 complement(1983258..1983749) 1 NC_010407.1 hypothetical protein 1983749 6157606 CMS_1878 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710579.1 1983258 R 31964 CDS YP_001710580.1 170782247 6157607 complement(1984188..1987322) 1 NC_010407.1 TD repeat-containing membrane-anchored protein 1987322 6157607 CMS_1879 Clavibacter michiganensis subsp. sepedonicus TD repeat-containing membrane-anchored protein YP_001710580.1 1984188 R 31964 CDS YP_001710581.1 170782248 6157608 complement(1987341..1990652) 1 NC_010407.1 hypothetical protein 1990652 6157608 CMS_1880 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710581.1 1987341 R 31964 CDS YP_001710582.1 170782249 6157609 complement(1990819..1991700) 1 NC_010407.1 iron-chelating protein 1991700 6157609 CMS_1881 Clavibacter michiganensis subsp. sepedonicus iron-chelating protein YP_001710582.1 1990819 R 31964 CDS YP_001710583.1 170782250 6157610 1991795..1992493 1 NC_010407.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1992493 lipB 6157610 lipB Clavibacter michiganensis subsp. sepedonicus lipoate-protein ligase B YP_001710583.1 1991795 D 31964 CDS YP_001710584.1 170782251 6158796 1992490..1993479 1 NC_010407.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1993479 lipA 6158796 lipA Clavibacter michiganensis subsp. sepedonicus lipoyl synthase YP_001710584.1 1992490 D 31964 CDS YP_001710585.1 170782252 6158795 1993554..1994189 1 NC_010407.1 PadR family transcriptional regulator 1994189 6158795 CMS_1884 Clavibacter michiganensis subsp. sepedonicus PadR family transcriptional regulator YP_001710585.1 1993554 D 31964 CDS YP_001710586.1 170782253 6159054 complement(1996841..1999756) 1 NC_010407.1 hypothetical protein 1999756 6159054 CMS_1887 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710586.1 1996841 R 31964 CDS YP_001710587.1 170782254 6157614 complement(1999884..2000975) 1 NC_010407.1 hypothetical protein 2000975 6157614 CMS_1888 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710587.1 1999884 R 31964 CDS YP_001710588.1 170782255 6157615 2001189..2002604 1 NC_010407.1 hypothetical protein 2002604 6157615 CMS_1889 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710588.1 2001189 D 31964 CDS YP_001710589.1 170782256 6157616 2002698..2003657 1 NC_010407.1 hypothetical protein 2003657 6157616 CMS_1890 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710589.1 2002698 D 31964 CDS YP_001710590.1 170782257 6157617 complement(2003521..2005443) 1 NC_010407.1 DNA helicase 2005443 6157617 CMS_1891 Clavibacter michiganensis subsp. sepedonicus DNA helicase YP_001710590.1 2003521 R 31964 CDS YP_001710591.1 170782258 6157618 complement(2005454..2006476) 1 NC_010407.1 hydrolase 2006476 6157618 CMS_1892 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710591.1 2005454 R 31964 CDS YP_001710592.1 170782259 6157619 2006548..2007624 1 NC_010407.1 macrolide phosphotransferase 2007624 6157619 CMS_1893 Clavibacter michiganensis subsp. sepedonicus macrolide phosphotransferase YP_001710592.1 2006548 D 31964 CDS YP_001710593.1 170782260 6157620 complement(2007537..2010797) 1 NC_010407.1 ATP-dependent DNA helicase 2010797 6157620 CMS_1894 Clavibacter michiganensis subsp. sepedonicus ATP-dependent DNA helicase YP_001710593.1 2007537 R 31964 CDS YP_001710594.1 170782261 6157621 complement(2010794..2014063) 1 NC_010407.1 ATP-dependent DNA helicase 2014063 6157621 CMS_1895 Clavibacter michiganensis subsp. sepedonicus ATP-dependent DNA helicase YP_001710594.1 2010794 R 31964 CDS YP_001710595.1 170782262 6157622 2014257..2014481 1 NC_010407.1 hypothetical protein 2014481 6157622 CMS_1896 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710595.1 2014257 D 31964 CDS YP_001710596.1 170782263 6157623 2014493..2014780 1 NC_010407.1 hypothetical protein 2014780 6157623 CMS_1897 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710596.1 2014493 D 31964 CDS YP_001710597.1 170782264 6157624 complement(2014857..2015585) 1 NC_010407.1 hypothetical protein 2015585 6157624 CMS_1898 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710597.1 2014857 R 31964 CDS YP_001710598.1 170782265 6157625 2015726..2017288 1 NC_010407.1 ATP-dependent RNA helicase 2017288 6157625 CMS_1899 Clavibacter michiganensis subsp. sepedonicus ATP-dependent RNA helicase YP_001710598.1 2015726 D 31964 CDS YP_001710599.1 170782266 6157626 2017386..2018348 1 NC_010407.1 N; insertion element IS1121 transposase 2018348 6157626 CMS_1900 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710599.1 2017386 D 31964 CDS YP_001710600.1 170782267 6157627 complement(2018456..2019331) 1 NC_010407.1 hypothetical protein 2019331 6157627 CMS_1901 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710600.1 2018456 R 31964 CDS YP_001710601.1 170782268 6157629 2020454..2022151 1 NC_010407.1 Xaa-Pro aminopeptidase 2022151 6157629 CMS_1903 Clavibacter michiganensis subsp. sepedonicus Xaa-Pro aminopeptidase YP_001710601.1 2020454 D 31964 CDS YP_001710602.1 170782269 6157630 complement(2022209..2022874) 1 NC_010407.1 hypothetical protein 2022874 6157630 CMS_1904 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710602.1 2022209 R 31964 CDS YP_001710603.1 170782270 6157631 2022979..2024280 1 NC_010407.1 hypothetical protein 2024280 6157631 CMS_1905 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710603.1 2022979 D 31964 CDS YP_001710604.1 170782271 6157632 2024264..2024815 1 NC_010407.1 hypothetical protein 2024815 6157632 CMS_1906 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710604.1 2024264 D 31964 CDS YP_001710605.1 170782272 6157633 2024805..2025980 1 NC_010407.1 ATP-binding protein 2025980 6157633 CMS_1907 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001710605.1 2024805 D 31964 CDS YP_001710606.1 170782273 6157634 2026099..2026308 1 NC_010407.1 hypothetical protein 2026308 6157634 CMS_1908 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710606.1 2026099 D 31964 CDS YP_001710607.1 170782274 6157635 2026369..2027235 1 NC_010407.1 LysR family transcriptional regulator 2027235 6157635 CMS_1909 Clavibacter michiganensis subsp. sepedonicus LysR family transcriptional regulator YP_001710607.1 2026369 D 31964 CDS YP_001710608.1 170782275 6157636 complement(2027274..2027648) 1 NC_010407.1 sec-independent protein translocase 2027648 tatB 6157636 tatB Clavibacter michiganensis subsp. sepedonicus sec-independent protein translocase YP_001710608.1 2027274 R 31964 CDS YP_001710609.1 170782276 6159008 2027800..2028432 1 NC_010407.1 O-methyltransferase 2028432 6159008 CMS_1911 Clavibacter michiganensis subsp. sepedonicus O-methyltransferase YP_001710609.1 2027800 D 31964 CDS YP_001710610.1 170782277 6157637 complement(2028542..2029504) 1 NC_010407.1 N; insertion element ISCmi2 transposase 2029504 6157637 CMS_1912 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710610.1 2028542 R 31964 CDS YP_001710611.1 170782278 6157638 complement(2029601..2029774) 1 NC_010407.1 hypothetical protein 2029774 6157638 CMS_1913 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710611.1 2029601 R 31964 CDS YP_001710612.1 170782279 6157639 complement(2029922..2031154) 1 NC_010407.1 hypothetical protein 2031154 6157639 CMS_1914 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710612.1 2029922 R 31964 CDS YP_001710613.1 170782280 6157640 complement(2031136..2032242) 1 NC_010407.1 catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate; succinyl-diaminopimelate desuccinylase 2032242 dapE 6157640 dapE Clavibacter michiganensis subsp. sepedonicus succinyl-diaminopimelate desuccinylase YP_001710613.1 2031136 R 31964 CDS YP_001710614.1 170782281 6158654 2032416..2033312 1 NC_010407.1 transferase 2033312 6158654 CMS_1916 Clavibacter michiganensis subsp. sepedonicus transferase YP_001710614.1 2032416 D 31964 CDS YP_001710615.1 170782282 6157641 complement(2033349..2034122) 1 NC_010407.1 protein phosphatase 2034122 6157641 CMS_1917 Clavibacter michiganensis subsp. sepedonicus protein phosphatase YP_001710615.1 2033349 R 31964 CDS YP_001710616.1 170782283 6157642 complement(2034182..2035243) 1 NC_010407.1 hypothetical protein 2035243 6157642 CMS_1918 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710616.1 2034182 R 31964 CDS YP_001710617.1 170782284 6157643 2035553..2036032 1 NC_010407.1 AsnC family transcriptional regulator 2036032 6157643 CMS_1919 Clavibacter michiganensis subsp. sepedonicus AsnC family transcriptional regulator YP_001710617.1 2035553 D 31964 CDS YP_001710618.1 170782285 6157644 2036139..2036759 1 NC_010407.1 methylated-DNA--protein-cysteine methyltransferase 2036759 6157644 CMS_1920 Clavibacter michiganensis subsp. sepedonicus methylated-DNA--protein-cysteine methyltransferase YP_001710618.1 2036139 D 31964 CDS YP_001710619.1 170782286 6157645 2036774..2037349 1 NC_010407.1 DNA-3-methyladenine glycosylase I 2037349 tag 6157645 tag Clavibacter michiganensis subsp. sepedonicus DNA-3-methyladenine glycosylase I YP_001710619.1 2036774 D 31964 CDS YP_001710620.1 170782287 6159005 complement(2037361..2038116) 1 NC_010407.1 hypothetical protein 2038116 6159005 CMS_1922 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710620.1 2037361 R 31964 CDS YP_001710621.1 170782288 6157646 complement(2038228..2038497) 1 NC_010407.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit epsilon 2038497 atpC 6157646 atpC Clavibacter michiganensis subsp. sepedonicus ATP synthase F0F1 subunit epsilon YP_001710621.1 2038228 R 31964 CDS YP_001710622.1 170782289 6158618 complement(2038499..2039959) 1 NC_010407.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 2039959 atpD 6158618 atpD Clavibacter michiganensis subsp. sepedonicus ATP synthase F0F1 subunit beta YP_001710622.1 2038499 R 31964 CDS YP_001710623.1 170782290 6158619 complement(2039995..2040894) 1 NC_010407.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 2040894 atpG 6158619 atpG Clavibacter michiganensis subsp. sepedonicus ATP synthase F0F1 subunit gamma YP_001710623.1 2039995 R 31964 CDS YP_001710624.1 170782291 6158622 complement(2040944..2042602) 1 NC_010407.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 2042602 atpA 6158622 atpA Clavibacter michiganensis subsp. sepedonicus ATP synthase F0F1 subunit alpha YP_001710624.1 2040944 R 31964 CDS YP_001710625.1 170782292 6158616 complement(2042637..2043428) 1 NC_010407.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 2043428 atpH 6158616 atpH Clavibacter michiganensis subsp. sepedonicus ATP synthase F0F1 subunit delta YP_001710625.1 2042637 R 31964 CDS YP_001710626.1 170782293 6158623 complement(2043428..2043973) 1 NC_010407.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 2043973 atpF 6158623 atpF Clavibacter michiganensis subsp. sepedonicus ATP synthase F0F1 subunit B YP_001710626.1 2043428 R 31964 CDS YP_001710627.1 170782294 6158621 complement(2044006..2044239) 1 NC_010407.1 ATP synthase subunit C 2044239 atpE 6158621 atpE Clavibacter michiganensis subsp. sepedonicus ATP synthase subunit C YP_001710627.1 2044006 R 31964 CDS YP_001710628.1 170782295 6158620 complement(2044286..2044966) 1 NC_010407.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 2044966 atpB 6158620 atpB Clavibacter michiganensis subsp. sepedonicus ATP synthase F0F1 subunit A YP_001710628.1 2044286 R 31964 CDS YP_001710629.1 170782296 6158617 complement(2045302..2046264) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2046264 6158617 CMS_1931 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710629.1 2045302 R 31964 CDS YP_001710630.1 170782297 6157647 2046393..2047496 1 NC_010407.1 aldolase 2047496 6157647 CMS_1932 Clavibacter michiganensis subsp. sepedonicus aldolase YP_001710630.1 2046393 D 31964 CDS YP_001710631.1 170782298 6157648 2047826..2048815 1 NC_010407.1 phage resistance protein 2048815 6157648 CMS_1933 Clavibacter michiganensis subsp. sepedonicus phage resistance protein YP_001710631.1 2047826 D 31964 CDS YP_001710632.1 170782299 6157649 complement(2050685..2053417) 1 NC_010407.1 phosphoenolpyruvate carboxylase 2053417 ppc 6157649 ppc Clavibacter michiganensis subsp. sepedonicus phosphoenolpyruvate carboxylase YP_001710632.1 2050685 R 31964 CDS YP_001710633.1 170782300 6158873 complement(2053522..2054748) 1 NC_010407.1 efflux protein 2054748 6158873 CMS_1940 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001710633.1 2053522 R 31964 CDS YP_001710634.1 170782301 6157650 complement(2054954..2055421) 1 NC_010407.1 hypothetical protein 2055421 6157650 CMS_1941 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710634.1 2054954 R 31964 CDS YP_001710635.1 170782302 6157651 2055520..2055858 1 NC_010407.1 hypothetical protein 2055858 6157651 CMS_1942 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710635.1 2055520 D 31964 CDS YP_001710636.1 170782303 6157652 complement(2055938..2056747) 1 NC_010407.1 hypothetical protein 2056747 6157652 CMS_1943 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710636.1 2055938 R 31964 CDS YP_001710637.1 170782304 6157653 2057108..2057776 1 NC_010407.1 two-component system response regulator 2057776 6157653 CMS_1944 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001710637.1 2057108 D 31964 CDS YP_001710638.1 170782305 6157654 2057890..2058396 1 NC_010407.1 hypothetical protein 2058396 6157654 CMS_1945 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710638.1 2057890 D 31964 CDS YP_001710639.1 170782306 6157655 2058532..2058909 1 NC_010407.1 hypothetical protein 2058909 6157655 CMS_1946 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710639.1 2058532 D 31964 CDS YP_001710640.1 170782307 6157656 complement(2058952..2059914) 1 NC_010407.1 N/R; insertion element IS1121 transposase 2059914 6157656 CMS_1947 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710640.1 2058952 R 31964 CDS YP_001710641.1 170782308 6157657 complement(2060012..2061820) 1 NC_010407.1 DNA helicase 2061820 6157657 CMS_1948 Clavibacter michiganensis subsp. sepedonicus DNA helicase YP_001710641.1 2060012 R 31964 CDS YP_001710642.1 170782309 6157658 complement(2062020..2063201) 1 NC_010407.1 acyl-CoA dehydrogenase 2063201 6157658 CMS_1949 Clavibacter michiganensis subsp. sepedonicus acyl-CoA dehydrogenase YP_001710642.1 2062020 R 31964 CDS YP_001710643.1 170782310 6157659 complement(2063254..2064105) 1 NC_010407.1 dioxygenase 2064105 6157659 CMS_1950 Clavibacter michiganensis subsp. sepedonicus dioxygenase YP_001710643.1 2063254 R 31964 CDS YP_001710644.1 170782311 6157660 2064230..2065021 1 NC_010407.1 lipolytic enzyme 2065021 6157660 CMS_1951 Clavibacter michiganensis subsp. sepedonicus lipolytic enzyme YP_001710644.1 2064230 D 31964 CDS YP_001710645.1 170782312 6157661 complement(2065038..2066252) 1 NC_010407.1 carboxypeptidase 2066252 6157661 CMS_1952 Clavibacter michiganensis subsp. sepedonicus carboxypeptidase YP_001710645.1 2065038 R 31964 CDS YP_001710646.1 170782313 6157662 complement(2066249..2067103) 1 NC_010407.1 tRNA/rRNA methyltransferase 2067103 6157662 CMS_1953 Clavibacter michiganensis subsp. sepedonicus tRNA/rRNA methyltransferase YP_001710646.1 2066249 R 31964 CDS YP_001710647.1 170782314 6157663 2067215..2068069 1 NC_010407.1 NAD-dependent deacetylase 2068069 6157663 CMS_1954 Clavibacter michiganensis subsp. sepedonicus NAD-dependent deacetylase YP_001710647.1 2067215 D 31964 CDS YP_001710648.1 170782315 6157664 2068066..2068692 1 NC_010407.1 phosphoglycerate mutase 2068692 6157664 CMS_1955 Clavibacter michiganensis subsp. sepedonicus phosphoglycerate mutase YP_001710648.1 2068066 D 31964 CDS YP_001710649.1 170782316 6157665 complement(2068756..2069850) 1 NC_010407.1 glycosyl transferase 2069850 6157665 CMS_1956 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710649.1 2068756 R 31964 CDS YP_001710650.1 170782317 6157666 complement(2069847..2070743) 1 NC_010407.1 hydrolase 2070743 6157666 CMS_1957 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710650.1 2069847 R 31964 CDS YP_001710651.1 170782318 6157667 2070876..2072609 1 NC_010407.1 trehalose synthase 2072609 treS 6157667 treS Clavibacter michiganensis subsp. sepedonicus trehalose synthase YP_001710651.1 2070876 D 31964 CDS YP_001710652.1 170782319 6159022 2072620..2073321 1 NC_010407.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 2073321 6159022 CMS_1959 Clavibacter michiganensis subsp. sepedonicus DNA polymerase III subunit epsilon YP_001710652.1 2072620 D 31964 CDS YP_001710653.1 170782320 6157668 complement(2073429..2073686) 1 NC_010407.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2073686 rpmE2 6157668 rpmE2 Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L31 YP_001710653.1 2073429 R 31964 CDS YP_001710654.1 170782321 6158957 complement(2073816..2074637) 1 NC_010407.1 ABC transporter ATP-binding subunit 2074637 6158957 CMS_1961 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710654.1 2073816 R 31964 CDS YP_001710655.1 170782322 6157669 complement(2074692..2075876) 1 NC_010407.1 glycosyl transferase 2075876 6157669 CMS_1962 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710655.1 2074692 R 31964 CDS YP_001710656.1 170782323 6157670 2075923..2077164 1 NC_010407.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 2077164 glgC 6157670 glgC Clavibacter michiganensis subsp. sepedonicus glucose-1-phosphate adenylyltransferase YP_001710656.1 2075923 D 31964 CDS YP_001710657.1 170782324 6158718 2077161..2077859 1 NC_010407.1 phosphoserine phosphatase 2077859 serB 6158718 serB Clavibacter michiganensis subsp. sepedonicus phosphoserine phosphatase YP_001710657.1 2077161 D 31964 CDS YP_001710658.1 170782325 6158987 complement(2077904..2078860) 1 NC_010407.1 phosphotransferase 2078860 6158987 CMS_1965 Clavibacter michiganensis subsp. sepedonicus phosphotransferase YP_001710658.1 2077904 R 31964 CDS YP_001710659.1 170782326 6157671 complement(2078884..2079594) 1 NC_010407.1 3-oxoacyl-ACP reductase 2079594 fabG 6157671 fabG Clavibacter michiganensis subsp. sepedonicus 3-oxoacyl-ACP reductase YP_001710659.1 2078884 R 31964 CDS YP_001710660.1 170782327 6158679 2079715..2080170 1 NC_010407.1 hypothetical protein 2080170 6158679 CMS_1967 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710660.1 2079715 D 31964 CDS YP_001710661.1 170782328 6157672 2080167..2080424 1 NC_010407.1 hypothetical protein 2080424 6157672 CMS_1968 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710661.1 2080167 D 31964 CDS YP_001710662.1 170782329 6157673 2080421..2081266 1 NC_010407.1 sortase-sorted surface protein 2081266 6157673 CMS_1969 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface protein YP_001710662.1 2080421 D 31964 CDS YP_001710663.1 170782330 6157674 complement(2081318..2082916) 1 NC_010407.1 ABC transporter ATP binding protein 2082916 6157674 CMS_1970 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP binding protein YP_001710663.1 2081318 R 31964 CDS YP_001710664.1 170782331 6157675 complement(2083138..2083473) 1 NC_010407.1 hypothetical protein 2083473 6157675 CMS_1971 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710664.1 2083138 R 31964 CDS YP_001710665.1 170782332 6157676 complement(2083470..2084240) 1 NC_010407.1 ABC transporter ATP-binding subunit 2084240 6157676 CMS_1972 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001710665.1 2083470 R 31964 CDS YP_001710666.1 170782333 6157677 complement(2084254..2084574) 1 NC_010407.1 dioxygenase ferredoxin subunit 2084574 6157677 CMS_1973 Clavibacter michiganensis subsp. sepedonicus dioxygenase ferredoxin subunit YP_001710666.1 2084254 R 31964 CDS YP_001710667.1 170782334 6157678 complement(2084571..2085782) 1 NC_010407.1 hypothetical protein 2085782 6157678 CMS_1974 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710667.1 2084571 R 31964 CDS YP_001710668.1 170782335 6157679 complement(2085783..2087201) 1 NC_010407.1 hypothetical protein 2087201 6157679 CMS_1975 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710668.1 2085783 R 31964 CDS YP_001710669.1 170782336 6157680 2087508..2088476 1 NC_010407.1 cytochrome oxidase assembly protein 2088476 6157680 CMS_1976 Clavibacter michiganensis subsp. sepedonicus cytochrome oxidase assembly protein YP_001710669.1 2087508 D 31964 CDS YP_001710670.1 170782337 6157681 complement(2088762..2089682) 1 NC_010407.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 2089682 6157681 CMS_1977 Clavibacter michiganensis subsp. sepedonicus protoheme IX farnesyltransferase YP_001710670.1 2088762 R 31964 CDS YP_001710671.1 170782338 6157682 2089866..2091947 1 NC_010407.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 2091947 tkt 6157682 tkt Clavibacter michiganensis subsp. sepedonicus transketolase YP_001710671.1 2089866 D 31964 CDS YP_001710672.1 170782339 6159019 2092098..2093213 1 NC_010407.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 2093213 tal 6159019 tal Clavibacter michiganensis subsp. sepedonicus transaldolase YP_001710672.1 2092098 D 31964 CDS YP_001710673.1 170782340 6159006 2093210..2094805 1 NC_010407.1 glucose-6-phosphate isomerase 2094805 pgi 6159006 pgi Clavibacter michiganensis subsp. sepedonicus glucose-6-phosphate isomerase YP_001710673.1 2093210 D 31964 CDS YP_001710674.1 170782341 6158860 2094844..2096385 1 NC_010407.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2096385 zwf 6158860 zwf Clavibacter michiganensis subsp. sepedonicus glucose-6-phosphate 1-dehydrogenase YP_001710674.1 2094844 D 31964 CDS YP_001710675.1 170782342 6159107 2096382..2097380 1 NC_010407.1 hypothetical protein 2097380 6159107 CMS_1982 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710675.1 2096382 D 31964 CDS YP_001710676.1 170782343 6157683 2097377..2098147 1 NC_010407.1 6-phosphogluconolactonase 2098147 pgl 6157683 pgl Clavibacter michiganensis subsp. sepedonicus 6-phosphogluconolactonase YP_001710676.1 2097377 D 31964 CDS YP_001710677.1 170782344 6158862 complement(2098327..2098695) 1 NC_010407.1 hypothetical protein 2098695 6158862 CMS_1984 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710677.1 2098327 R 31964 CDS YP_001710678.1 170782345 6157684 complement(2098707..2098958) 1 NC_010407.1 preprotein translocase subunit SecG 2098958 secG 6157684 secG Clavibacter michiganensis subsp. sepedonicus preprotein translocase subunit SecG YP_001710678.1 2098707 R 31964 CDS YP_001710679.1 170782346 6158985 complement(2099100..2099903) 1 NC_010407.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 2099903 tpiA 6158985 tpiA Clavibacter michiganensis subsp. sepedonicus triosephosphate isomerase YP_001710679.1 2099100 R 31964 CDS YP_001710680.1 170782347 6159020 complement(2099894..2101108) 1 NC_010407.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2101108 pgk 6159020 pgk Clavibacter michiganensis subsp. sepedonicus phosphoglycerate kinase YP_001710680.1 2099894 R 31964 CDS YP_001710681.1 170782348 6158861 complement(2101115..2102122) 1 NC_010407.1 glyceraldehyde-3-phosphate dehydrogenase 2102122 gap 6158861 gap Clavibacter michiganensis subsp. sepedonicus glyceraldehyde-3-phosphate dehydrogenase YP_001710681.1 2101115 R 31964 CDS YP_001710682.1 170782349 6158708 complement(2102250..2102876) 1 NC_010407.1 superoxide dismutase Fe-Zn 2102876 sodB 6158708 sodB Clavibacter michiganensis subsp. sepedonicus superoxide dismutase Fe-Zn YP_001710682.1 2102250 R 31964 CDS YP_001710683.1 170782350 6158994 complement(2103045..2104025) 1 NC_010407.1 hypothetical protein 2104025 6158994 CMS_1990 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710683.1 2103045 R 31964 CDS YP_001710684.1 170782351 6157685 complement(2104055..2104942) 1 NC_010407.1 hypothetical protein 2104942 6157685 CMS_1991 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710684.1 2104055 R 31964 CDS YP_001710685.1 170782352 6157686 complement(2105007..2106935) 1 NC_010407.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2106935 uvrC 6157686 uvrC Clavibacter michiganensis subsp. sepedonicus excinuclease ABC subunit C YP_001710685.1 2105007 R 31964 CDS YP_001710686.1 170782353 6159092 complement(2106935..2109856) 1 NC_010407.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 2109856 uvrA 6159092 uvrA Clavibacter michiganensis subsp. sepedonicus excinuclease ABC subunit A YP_001710686.1 2106935 R 31964 CDS YP_001710687.1 170782354 6159089 complement(2109938..2112004) 1 NC_010407.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2112004 uvrB 6159089 uvrB Clavibacter michiganensis subsp. sepedonicus excinuclease ABC subunit B YP_001710687.1 2109938 R 31964 CDS YP_001710688.1 170782355 6159091 complement(2112014..2112628) 1 NC_010407.1 dephospho-CoA kinase 2112628 coaE 6159091 coaE Clavibacter michiganensis subsp. sepedonicus dephospho-CoA kinase YP_001710688.1 2112014 R 31964 CDS YP_001710689.1 170782356 6158641 complement(2112784..2114238) 1 NC_010407.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2114238 rpsA 6158641 rpsA Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S1 YP_001710689.1 2112784 R 31964 CDS YP_001710690.1 170782357 6158964 complement(2114437..2116116) 1 NC_010407.1 hypothetical protein 2116116 6158964 CMS_1997 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710690.1 2114437 R 31964 CDS YP_001710691.1 170782358 6157687 complement(2116113..2116571) 1 NC_010407.1 multiphosphoryl transfer protein 2116571 fruB 6157687 fruB Clavibacter michiganensis subsp. sepedonicus multiphosphoryl transfer protein YP_001710691.1 2116113 R 31964 CDS YP_001710692.1 170782359 6158695 complement(2116621..2119305) 1 NC_010407.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 2119305 polA 6158695 polA Clavibacter michiganensis subsp. sepedonicus DNA polymerase I YP_001710692.1 2116621 R 31964 CDS YP_001710693.1 170782360 6158872 2119360..2119794 1 NC_010407.1 hypothetical protein 2119794 6158872 CMS_2000 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710693.1 2119360 D 31964 CDS YP_001710694.1 170782361 6157688 2119931..2120893 1 NC_010407.1 N; insertion element ISCmi2 transposase 2120893 6157688 CMS_2001 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710694.1 2119931 D 31964 CDS YP_001710695.1 170782362 6157689 complement(2120904..2121866) 1 NC_010407.1 N; insertion element IS1121 transposase 2121866 6157689 CMS_2002 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710695.1 2120904 R 31964 CDS YP_001710696.1 170782363 6157690 complement(2121964..2122572) 1 NC_010407.1 two-component system response regulator 2122572 6157690 CMS_2003 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001710696.1 2121964 R 31964 CDS YP_001710697.1 170782364 6159046 complement(2122837..2124294) 1 NC_010407.1 pyruvate kinase 2124294 pyk 6159046 pyk Clavibacter michiganensis subsp. sepedonicus pyruvate kinase YP_001710697.1 2122837 R 31964 CDS YP_001710698.1 170782365 6158906 complement(2124382..2125839) 1 NC_010407.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 2125839 gltD 6158906 gltD Clavibacter michiganensis subsp. sepedonicus glutamate synthase subunit beta YP_001710698.1 2124382 R 31964 CDS YP_001710699.1 170782366 6157692 complement(2125832..2130403) 1 NC_010407.1 glutamate synthase subunit alpha 2130403 6157692 CMS_2006 Clavibacter michiganensis subsp. sepedonicus glutamate synthase subunit alpha YP_001710699.1 2125832 R 31964 CDS YP_001710700.1 170782367 6157693 complement(2130505..2131539) 1 NC_010407.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2131539 lgt 6157693 lgt Clavibacter michiganensis subsp. sepedonicus prolipoprotein diacylglyceryl transferase YP_001710700.1 2130505 R 31964 CDS YP_001710701.1 170782368 6158790 complement(2131599..2132417) 1 NC_010407.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2132417 trpA 6158790 trpA Clavibacter michiganensis subsp. sepedonicus tryptophan synthase subunit alpha YP_001710701.1 2131599 R 31964 CDS YP_001710702.1 170782369 6159071 complement(2132414..2133628) 1 NC_010407.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2133628 trpB 6159071 trpB Clavibacter michiganensis subsp. sepedonicus tryptophan synthase subunit beta YP_001710702.1 2132414 R 31964 CDS YP_001710703.1 170782370 6159072 complement(2133625..2134401) 1 NC_010407.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 2134401 trpC 6159072 trpC Clavibacter michiganensis subsp. sepedonicus indole-3-glycerol phosphate synthase YP_001710703.1 2133625 R 31964 CDS YP_001710704.1 170782371 6159073 complement(2134402..2134644) 1 NC_010407.1 hypothetical protein 2134644 6159073 CMS_2011 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710704.1 2134402 R 31964 CDS YP_001710705.1 170782372 6157694 complement(2134685..2135386) 1 NC_010407.1 hypothetical protein 2135386 6157694 CMS_2012 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710705.1 2134685 R 31964 CDS YP_001710706.1 170782373 6157695 complement(2135386..2136942) 1 NC_010407.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2136942 trpE 6157695 trpE Clavibacter michiganensis subsp. sepedonicus anthranilate synthase component I YP_001710706.1 2135386 R 31964 CDS YP_001710707.1 170782374 6159076 complement(2136939..2137355) 1 NC_010407.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 2137355 hisI 6159076 hisI Clavibacter michiganensis subsp. sepedonicus phosphoribosyl-AMP cyclohydrolase YP_001710707.1 2136939 R 31964 CDS YP_001710708.1 170782375 6158756 complement(2137352..2138161) 1 NC_010407.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2138161 hisF 6158756 hisF Clavibacter michiganensis subsp. sepedonicus imidazole glycerol phosphate synthase subunit HisF YP_001710708.1 2137352 R 31964 CDS YP_001710709.1 170782376 6158753 complement(2138164..2139003) 1 NC_010407.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2139003 hisG 6158753 hisG Clavibacter michiganensis subsp. sepedonicus ATP phosphoribosyltransferase YP_001710709.1 2138164 R 31964 CDS YP_001710710.1 170782377 6158754 complement(2139050..2139313) 1 NC_010407.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 2139313 hisE 6158754 hisE Clavibacter michiganensis subsp. sepedonicus phosphoribosyl-ATP pyrophosphatase YP_001710710.1 2139050 R 31964 CDS YP_001710711.1 170782378 6157696 complement(2139825..2140493) 1 NC_010407.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 2140493 rpe 6157696 rpe Clavibacter michiganensis subsp. sepedonicus ribulose-phosphate 3-epimerase YP_001710711.1 2139825 R 31964 CDS YP_001710712.1 170782379 6158943 complement(2140504..2141970) 1 NC_010407.1 Sun-family protein 2141970 6158943 CMS_2021 Clavibacter michiganensis subsp. sepedonicus Sun-family protein YP_001710712.1 2140504 R 31964 CDS YP_001710713.1 170782380 6157697 complement(2142038..2142955) 1 NC_010407.1 methionyl-tRNA formyltransferase 2142955 fmt 6157697 fmt Clavibacter michiganensis subsp. sepedonicus methionyl-tRNA formyltransferase YP_001710713.1 2142038 R 31964 CDS YP_001710714.1 170782381 6158690 complement(2143071..2145107) 1 NC_010407.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 2145107 priA 6158690 priA Clavibacter michiganensis subsp. sepedonicus primosome assembly protein PriA YP_001710714.1 2143071 R 31964 CDS YP_001710715.1 170782382 6158881 complement(2145222..2146433) 1 NC_010407.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2146433 metK 6158881 metK Clavibacter michiganensis subsp. sepedonicus S-adenosylmethionine synthetase YP_001710715.1 2145222 R 31964 CDS YP_001710716.1 170782383 6158811 complement(2146473..2147690) 1 NC_010407.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2147690 coaBC 6158811 coaBC Clavibacter michiganensis subsp. sepedonicus bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_001710716.1 2146473 R 31964 CDS YP_001710717.1 170782384 6158639 complement(2147769..2148038) 1 NC_010407.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2148038 rpoZ 6158639 rpoZ Clavibacter michiganensis subsp. sepedonicus DNA-directed RNA polymerase subunit omega YP_001710717.1 2147769 R 31964 CDS YP_001710718.1 170782385 6158963 complement(2148087..2148917) 1 NC_010407.1 N-terminal extension relative to homologues; guanylate kinase 2148917 gmk 6158963 gmk Clavibacter michiganensis subsp. sepedonicus guanylate kinase YP_001710718.1 2148087 R 31964 CDS YP_001710719.1 170782386 6158731 complement(2148992..2149885) 1 NC_010407.1 orotidine 5'-phosphate decarboxylase 2149885 pyrF 6158731 pyrF Clavibacter michiganensis subsp. sepedonicus orotidine 5'-phosphate decarboxylase YP_001710719.1 2148992 R 31964 CDS YP_001710720.1 170782387 6158911 complement(2149882..2153172) 1 NC_010407.1 carbamoylphosphate synthetase large chain 2153172 carB 6158911 carB Clavibacter michiganensis subsp. sepedonicus carbamoylphosphate synthetase large chain YP_001710720.1 2149882 R 31964 CDS YP_001710721.1 170782388 6158629 complement(2153172..2154350) 1 NC_010407.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2154350 carA 6158629 carA Clavibacter michiganensis subsp. sepedonicus carbamoyl phosphate synthase small subunit YP_001710721.1 2153172 R 31964 CDS YP_001710722.1 170782389 6158628 complement(2154347..2154874) 1 NC_010407.1 hypothetical protein 2154874 6158628 CMS_2031 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710722.1 2154347 R 31964 CDS YP_001710723.1 170782390 6157698 complement(2154871..2156262) 1 NC_010407.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2156262 pyrC 6157698 pyrC Clavibacter michiganensis subsp. sepedonicus dihydroorotase YP_001710723.1 2154871 R 31964 CDS YP_001710724.1 170782391 6158908 complement(2156259..2157215) 1 NC_010407.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 2157215 pyrB 6158908 pyrB Clavibacter michiganensis subsp. sepedonicus aspartate carbamoyltransferase YP_001710724.1 2156259 R 31964 CDS YP_001710725.1 170782392 6158907 complement(2157212..2157796) 1 NC_010407.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 2157796 pyrR 6158907 pyrR Clavibacter michiganensis subsp. sepedonicus bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_001710725.1 2157212 R 31964 CDS YP_001710726.1 170782393 6158914 complement(2157908..2159932) 1 NC_010407.1 acetyl-coenzyme A synthetase 2159932 acsA 6158914 acsA Clavibacter michiganensis subsp. sepedonicus acetyl-coenzyme A synthetase YP_001710726.1 2157908 R 31964 CDS YP_001710727.1 170782394 6158591 complement(2160006..2160881) 1 NC_010407.1 transport protein 2160881 6158591 CMS_2036 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710727.1 2160006 R 31964 CDS YP_001710728.1 170782395 6157699 complement(2160878..2161930) 1 NC_010407.1 substrate-binding transport protein 2161930 6157699 CMS_2037 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001710728.1 2160878 R 31964 CDS YP_001710729.1 170782396 6157700 complement(2162013..2162729) 1 NC_010407.1 ABC transporter ATP-binding protein 2162729 6157700 CMS_2038 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001710729.1 2162013 R 31964 CDS YP_001710730.1 170782397 6157701 complement(2162978..2164606) 1 NC_010407.1 sortase-sorted surface protein 2164606 6157701 CMS_2039 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface protein YP_001710730.1 2162978 R 31964 CDS YP_001710731.1 170782398 6157702 complement(2164683..2165096) 1 NC_010407.1 transcription termination protein 2165096 nusB 6157702 nusB Clavibacter michiganensis subsp. sepedonicus transcription termination protein YP_001710731.1 2164683 R 31964 CDS YP_001710732.1 170782399 6158844 complement(2165100..2165663) 1 NC_010407.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2165663 efp 6158844 efp Clavibacter michiganensis subsp. sepedonicus elongation factor P YP_001710732.1 2165100 R 31964 CDS YP_001710733.1 170782400 6158675 complement(2165775..2166215) 1 NC_010407.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2166215 aroQ 6158675 aroQ Clavibacter michiganensis subsp. sepedonicus 3-dehydroquinate dehydratase YP_001710733.1 2165775 R 31964 CDS YP_001710734.1 170782401 6158612 complement(2166239..2167201) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2167201 6158612 CMS_2043 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710734.1 2166239 R 31964 CDS YP_001710735.1 170782402 6157703 complement(2167299..2168456) 1 NC_010407.1 thiamine monphosphate kinase 2168456 thiL 6157703 thiL Clavibacter michiganensis subsp. sepedonicus thiamine monphosphate kinase YP_001710735.1 2167299 R 31964 CDS YP_001710736.1 170782403 6159013 2168481..2168987 1 NC_010407.1 lipoprotein 2168987 6159013 CMS_2045 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001710736.1 2168481 D 31964 CDS YP_001710737.1 170782404 6157704 complement(2168944..2169813) 1 NC_010407.1 glycosyl transferase 2169813 6157704 CMS_2046 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710737.1 2168944 R 31964 CDS YP_001710738.1 170782405 6157705 complement(2169982..2171097) 1 NC_010407.1 D-alanine-D-alanine ligase 2171097 ddl 6157705 ddl Clavibacter michiganensis subsp. sepedonicus D-alanine-D-alanine ligase YP_001710738.1 2169982 R 31964 CDS YP_001710739.1 170782406 6158656 complement(2171094..2172167) 1 NC_010407.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2172167 gpsA 6158656 gpsA Clavibacter michiganensis subsp. sepedonicus NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001710739.1 2171094 R 31964 CDS YP_001710740.1 170782407 6158735 complement(2172160..2173008) 1 NC_010407.1 acyltransferase 2173008 6158735 CMS_2049 Clavibacter michiganensis subsp. sepedonicus acyltransferase YP_001710740.1 2172160 R 31964 CDS YP_001710741.1 170782408 6157706 complement(2173020..2174390) 1 NC_010407.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2174390 6157706 CMS_2050 Clavibacter michiganensis subsp. sepedonicus UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001710741.1 2173020 R 31964 CDS YP_001710742.1 170782409 6157707 complement(2174391..2175005) 1 NC_010407.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2175005 leuD 6157707 leuD Clavibacter michiganensis subsp. sepedonicus isopropylmalate isomerase small subunit YP_001710742.1 2174391 R 31964 CDS YP_001710743.1 170782410 6158787 complement(2175008..2176489) 1 NC_010407.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2176489 leuC 6158787 leuC Clavibacter michiganensis subsp. sepedonicus isopropylmalate isomerase large subunit YP_001710743.1 2175008 R 31964 CDS YP_001710744.1 170782411 6158786 complement(2176555..2177376) 1 NC_010407.1 hypothetical protein 2177376 6158786 CMS_2053 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710744.1 2176555 R 31964 CDS YP_001710745.1 170782412 6157708 complement(2177373..2178413) 1 NC_010407.1 hypothetical protein 2178413 6157708 CMS_2054 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710745.1 2177373 R 31964 CDS YP_001710746.1 170782413 6157709 2178543..2179238 1 NC_010407.1 TetR family transcriptional regulator 2179238 6157709 CMS_2055 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001710746.1 2178543 D 31964 CDS YP_001710747.1 170782414 6157710 complement(2179267..2180064) 1 NC_010407.1 oxidoreductase 2180064 6157710 CMS_2056 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710747.1 2179267 R 31964 CDS YP_001710748.1 170782415 6157711 2180151..2181569 1 NC_010407.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 2181569 6157711 CMS_2057 Clavibacter michiganensis subsp. sepedonicus O-acetylhomoserine aminocarboxypropyltransferase YP_001710748.1 2180151 D 31964 CDS YP_001710749.1 170782416 6157712 2181611..2182822 1 NC_010407.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 2182822 metX 6157712 metX Clavibacter michiganensis subsp. sepedonicus homoserine O-acetyltransferase YP_001710749.1 2181611 D 31964 CDS YP_001710750.1 170782417 6158812 2182940..2183620 1 NC_010407.1 two-component system response regulator 2183620 6158812 CMS_2059 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001710750.1 2182940 D 31964 CDS YP_001710751.1 170782418 6157713 2183679..2184950 1 NC_010407.1 two-component system sensor kinase 2184950 6157713 CMS_2060 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001710751.1 2183679 D 31964 CDS YP_001710752.1 170782419 6157714 2184947..2186149 1 NC_010407.1 hypothetical protein 2186149 6157714 CMS_2061 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710752.1 2184947 D 31964 CDS YP_001710753.1 170782420 6157715 2186261..2187223 1 NC_010407.1 Nu; insertion element IS1121 transposase 2187223 6157715 CMS_2062 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710753.1 2186261 D 31964 CDS YP_001710754.1 170782421 6157716 2187287..2187907 1 NC_010407.1 two-component system response regulator 2187907 6157716 CMS_2063 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001710754.1 2187287 D 31964 CDS YP_001710755.1 170782422 6157717 complement(2187924..2189204) 1 NC_010407.1 efflux protein 2189204 6157717 CMS_2064 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001710755.1 2187924 R 31964 CDS YP_001710756.1 170782423 6157718 complement(2189243..2189560) 1 NC_010407.1 hypothetical protein 2189560 6157718 CMS_2065 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710756.1 2189243 R 31964 CDS YP_001710757.1 170782424 6157719 2189766..2190446 1 NC_010407.1 hypothetical protein 2190446 6157719 CMS_2066 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710757.1 2189766 D 31964 CDS YP_001710758.1 170782425 6157720 complement(2190443..2191375) 1 NC_010407.1 hypothetical protein 2191375 6157720 CMS_2067 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710758.1 2190443 R 31964 CDS YP_001710759.1 170782426 6157721 2191457..2192536 1 NC_010407.1 oxidoreductase 2192536 6157721 CMS_2068 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710759.1 2191457 D 31964 CDS YP_001710760.1 170782427 6157722 complement(2192603..2193646) 1 NC_010407.1 hypothetical protein 2193646 6157722 CMS_2069 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710760.1 2192603 R 31964 CDS YP_001710761.1 170782428 6157723 complement(2193639..2195069) 1 NC_010407.1 hypothetical protein 2195069 6157723 CMS_2070 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710761.1 2193639 R 31964 CDS YP_001710762.1 170782429 6157725 2196821..2200627 1 NC_010407.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; alpha-ketoglutarate decarboxylase 2200627 kgd 6157725 kgd Clavibacter michiganensis subsp. sepedonicus alpha-ketoglutarate decarboxylase YP_001710762.1 2196821 D 31964 CDS YP_001710763.1 170782430 6157726 complement(2200729..2201169) 1 NC_010407.1 acetyltransferase 2201169 6157726 CMS_2073 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001710763.1 2200729 R 31964 CDS YP_001710764.1 170782431 6157727 complement(2201204..2201446) 1 NC_010407.1 anti sigma factor 2201446 6157727 CMS_2074 Clavibacter michiganensis subsp. sepedonicus anti sigma factor YP_001710764.1 2201204 R 31964 CDS YP_001710765.1 170782432 6157728 complement(2201443..2202099) 1 NC_010407.1 ECF RNA polymerase sigma factor 2202099 sigR 6157728 sigR Clavibacter michiganensis subsp. sepedonicus ECF RNA polymerase sigma factor YP_001710765.1 2201443 R 31964 CDS YP_001710766.1 170782433 6158989 2202335..2203798 1 NC_010407.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2203798 aroA 6158989 aroA Clavibacter michiganensis subsp. sepedonicus 3-phosphoshikimate 1-carboxyvinyltransferase YP_001710766.1 2202335 D 31964 CDS YP_001710767.1 170782434 6158609 2203795..2204859 1 NC_010407.1 ATP-binding protein 2204859 6158609 CMS_2077 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001710767.1 2203795 D 31964 CDS YP_001710768.1 170782435 6157729 2204896..2205708 1 NC_010407.1 monophosphatase 2205708 6157729 CMS_2078 Clavibacter michiganensis subsp. sepedonicus monophosphatase YP_001710768.1 2204896 D 31964 CDS YP_001710769.1 170782436 6157731 2207470..2208552 1 NC_010407.1 substrate-binding transport protein 2208552 6157731 CMS_2080 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001710769.1 2207470 D 31964 CDS YP_001710770.1 170782437 6157732 2208576..2209580 1 NC_010407.1 ABC transporter ATP-binding protein 2209580 6157732 CMS_2081 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001710770.1 2208576 D 31964 CDS YP_001710771.1 170782438 6157734 complement(2212013..2212489) 1 NC_010407.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2212489 smpB 6157734 smpB Clavibacter michiganensis subsp. sepedonicus SsrA-binding protein YP_001710771.1 2212013 R 31964 CDS YP_001710772.1 170782439 6158993 complement(2212556..2213473) 1 NC_010407.1 cell division protein 2213473 ftsX 6158993 ftsX Clavibacter michiganensis subsp. sepedonicus cell division protein YP_001710772.1 2212556 R 31964 CDS YP_001710773.1 170782440 6158700 complement(2213470..2215086) 1 NC_010407.1 cell division-associated ATP-binding ABC transport protein 2215086 ftsE 6158700 ftsE Clavibacter michiganensis subsp. sepedonicus cell division-associated ATP-binding ABC transport protein YP_001710773.1 2213470 R 31964 CDS YP_001710774.1 170782441 6158696 complement(2215189..2216292) 1 NC_010407.1 chain release factor 2 2216292 prfB 6158696 prfB Clavibacter michiganensis subsp. sepedonicus chain release factor 2 YP_001710774.1 2215189 R 31964 CDS YP_001710775.1 170782442 6158878 2216368..2217672 1 NC_010407.1 transport protein 2217672 6158878 CMS_2087 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710775.1 2216368 D 31964 CDS YP_001710776.1 170782443 6157735 complement(2217680..2218219) 1 NC_010407.1 lipoprotein 2218219 6157735 CMS_2088 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001710776.1 2217680 R 31964 CDS YP_001710777.1 170782444 6157736 complement(2218216..2218671) 1 NC_010407.1 hypothetical protein 2218671 6157736 CMS_2089 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710777.1 2218216 R 31964 CDS YP_001710778.1 170782445 6157737 complement(2218646..2218984) 1 NC_010407.1 hypothetical protein 2218984 6157737 CMS_2090 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710778.1 2218646 R 31964 CDS YP_001710779.1 170782446 6157738 complement(2219023..2219217) 1 NC_010407.1 hypothetical protein 2219217 6157738 CMS_2091 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710779.1 2219023 R 31964 CDS YP_001710780.1 170782447 6157740 complement(2220216..2221040) 1 NC_010407.1 type II secretion protein 2221040 6157740 CMS_2093 Clavibacter michiganensis subsp. sepedonicus type II secretion protein YP_001710780.1 2220216 R 31964 CDS YP_001710781.1 170782448 6157741 complement(2221076..2222266) 1 NC_010407.1 type II secretion protein 2222266 6157741 CMS_2094 Clavibacter michiganensis subsp. sepedonicus type II secretion protein YP_001710781.1 2221076 R 31964 CDS YP_001710782.1 170782449 6157742 complement(2222383..2223816) 1 NC_010407.1 xylulose kinase 2223816 xylB 6157742 xylB Clavibacter michiganensis subsp. sepedonicus xylulose kinase YP_001710782.1 2222383 R 31964 CDS YP_001710783.1 170782450 6159047 2223994..2224917 1 NC_010407.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 2224917 6159047 CMS_2096 Clavibacter michiganensis subsp. sepedonicus D-cysteine desulfhydrase YP_001710783.1 2223994 D 31964 CDS YP_001710784.1 170782451 6157743 2225042..2225764 1 NC_010407.1 hypothetical protein 2225764 6157743 CMS_2097 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710784.1 2225042 D 31964 CDS YP_001710785.1 170782452 6157744 complement(2225835..2226857) 1 NC_010407.1 cation efflux protein 2226857 6157744 CMS_2098 Clavibacter michiganensis subsp. sepedonicus cation efflux protein YP_001710785.1 2225835 R 31964 CDS YP_001710786.1 170782453 6157745 complement(2226876..2227370) 1 NC_010407.1 hypothetical protein 2227370 6157745 CMS_2099 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710786.1 2226876 R 31964 CDS YP_001710787.1 170782454 6157746 complement(2227495..2228232) 1 NC_010407.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 2228232 rph 6157746 rph Clavibacter michiganensis subsp. sepedonicus ribonuclease PH YP_001710787.1 2227495 R 31964 CDS YP_001710788.1 170782455 6158944 complement(2228241..2229125) 1 NC_010407.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 2229125 racE 6158944 racE Clavibacter michiganensis subsp. sepedonicus glutamate racemase YP_001710788.1 2228241 R 31964 CDS YP_001710789.1 170782456 6158918 complement(2229184..2230647) 1 NC_010407.1 hypothetical protein 2230647 6158918 CMS_2102 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710789.1 2229184 R 31964 CDS YP_001710790.1 170782457 6157747 2230738..2232051 1 NC_010407.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2232051 6157747 CMS_2103 Clavibacter michiganensis subsp. sepedonicus nicotinate phosphoribosyltransferase YP_001710790.1 2230738 D 31964 CDS YP_001710791.1 170782458 6157748 complement(2232101..2232388) 1 NC_010407.1 hypothetical protein 2232388 6157748 CMS_2104 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710791.1 2232101 R 31964 CDS YP_001710792.1 170782459 6157749 complement(2232450..2234021) 1 NC_010407.1 transport protein 2234021 6157749 CMS_2105 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710792.1 2232450 R 31964 CDS YP_001710793.1 170782460 6157750 complement(2233997..2235940) 1 NC_010407.1 Match is to the C terminal portion. N-terminal half has no significant database matches.; ABC transporter ATP-binding protein 2235940 6157750 CMS_2106 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001710793.1 2233997 R 31964 CDS YP_001710794.1 170782461 6157751 2236234..2236926 1 NC_010407.1 hypothetical protein 2236926 6157751 CMS_2107 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710794.1 2236234 D 31964 CDS YP_001710795.1 170782462 6157752 2236963..2237763 1 NC_010407.1 polysaccharide export protein 2237763 6157752 CMS_2108 Clavibacter michiganensis subsp. sepedonicus polysaccharide export protein YP_001710795.1 2236963 D 31964 CDS YP_001710796.1 170782463 6157753 2237763..2238542 1 NC_010407.1 polysaccharide export protein 2238542 6157753 CMS_2109 Clavibacter michiganensis subsp. sepedonicus polysaccharide export protein YP_001710796.1 2237763 D 31964 CDS YP_001710797.1 170782464 6157754 2238627..2238938 1 NC_010407.1 hypothetical protein 2238938 6157754 CMS_2110 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710797.1 2238627 D 31964 CDS YP_001710798.1 170782465 6157755 complement(2238928..2239251) 1 NC_010407.1 DNA-binding protein 2239251 6157755 CMS_2111 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710798.1 2238928 R 31964 CDS YP_001710799.1 170782466 6157756 2239406..2240155 1 NC_010407.1 hypothetical protein 2240155 6157756 CMS_2112 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710799.1 2239406 D 31964 CDS YP_001710800.1 170782467 6157757 complement(2240198..2241454) 1 NC_010407.1 probably involved in polysaccharide biosynthesis; hypothetical protein 2241454 6157757 CMS_2113 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710800.1 2240198 R 31964 CDS YP_001710801.1 170782468 6157758 complement(2241582..2242457) 1 NC_010407.1 glycosyl transferase 2242457 6157758 CMS_2114 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710801.1 2241582 R 31964 CDS YP_001710802.1 170782469 6157759 complement(2242454..2243275) 1 NC_010407.1 transferase 2243275 6157759 CMS_2115 Clavibacter michiganensis subsp. sepedonicus transferase YP_001710802.1 2242454 R 31964 CDS YP_001710803.1 170782470 6157760 complement(2243272..2244276) 1 NC_010407.1 glycosyl transferase 2244276 6157760 CMS_2116 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710803.1 2243272 R 31964 CDS YP_001710804.1 170782471 6157761 complement(2244496..2246049) 1 NC_010407.1 protease 2246049 6157761 CMS_2117 Clavibacter michiganensis subsp. sepedonicus protease YP_001710804.1 2244496 R 31964 CDS YP_001710805.1 170782472 6157762 complement(2246279..2247193) 1 NC_010407.1 hypothetical protein 2247193 6157762 CMS_2118 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710805.1 2246279 R 31964 CDS YP_001710806.1 170782473 6157763 complement(2247184..2247744) 1 NC_010407.1 hypothetical protein 2247744 6157763 CMS_2119 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710806.1 2247184 R 31964 CDS YP_001710807.1 170782474 6157764 2247925..2249130 1 NC_010407.1 aminotransferase 2249130 6157764 CMS_2120 Clavibacter michiganensis subsp. sepedonicus aminotransferase YP_001710807.1 2247925 D 31964 CDS YP_001710808.1 170782475 6157765 2249260..2250195 1 NC_010407.1 ABC transporter ATP-binding protein 2250195 6157765 CMS_2121 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001710808.1 2249260 D 31964 CDS YP_001710809.1 170782476 6157766 2250192..2251031 1 NC_010407.1 transport protein 2251031 6157766 CMS_2122 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710809.1 2250192 D 31964 CDS YP_001710810.1 170782477 6157767 2251127..2252368 1 NC_010407.1 two-component sensor kinase 2252368 6157767 CMS_2123 Clavibacter michiganensis subsp. sepedonicus two-component sensor kinase YP_001710810.1 2251127 D 31964 CDS YP_001710811.1 170782478 6157768 2252425..2253063 1 NC_010407.1 two-component response regulator 2253063 6157768 CMS_2124 Clavibacter michiganensis subsp. sepedonicus two-component response regulator YP_001710811.1 2252425 D 31964 CDS YP_001710812.1 170782479 6157769 2253167..2253541 1 NC_010407.1 atp-dependent Clp protease adaptor protein ClpS 2253541 clpS 6157769 clpS Clavibacter michiganensis subsp. sepedonicus atp-dependent Clp protease adaptor protein ClpS YP_001710812.1 2253167 D 31964 CDS YP_001710813.1 170782480 6158634 2253538..2254053 1 NC_010407.1 hypothetical protein 2254053 6158634 CMS_2126 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710813.1 2253538 D 31964 CDS YP_001710814.1 170782481 6157770 2254167..2255180 1 NC_010407.1 hypothetical protein 2255180 6157770 CMS_2127 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710814.1 2254167 D 31964 CDS YP_001710815.1 170782482 6157771 2255177..2255806 1 NC_010407.1 hypothetical protein 2255806 6157771 CMS_2128 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710815.1 2255177 D 31964 CDS YP_001710816.1 170782483 6157772 2255838..2256752 1 NC_010407.1 hypothetical protein 2256752 6157772 CMS_2129 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710816.1 2255838 D 31964 CDS YP_001710817.1 170782484 6157773 complement(2256763..2257725) 1 NC_010407.1 N/R; insertion element IS1121 transposase 2257725 6157773 CMS_2130 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710817.1 2256763 R 31964 CDS YP_001710818.1 170782485 6157774 2257842..2258417 1 NC_010407.1 hypothetical protein 2258417 6157774 CMS_2131 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710818.1 2257842 D 31964 CDS YP_001710819.1 170782486 6157775 2258419..2259129 1 NC_010407.1 two component system response regulator 2259129 6157775 CMS_2132 Clavibacter michiganensis subsp. sepedonicus two component system response regulator YP_001710819.1 2258419 D 31964 CDS YP_001710820.1 170782487 6157776 2259126..2260592 1 NC_010407.1 two-component system sensor kinase 2260592 6157776 CMS_2133 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001710820.1 2259126 D 31964 CDS YP_001710821.1 170782488 6157777 complement(2260631..2261119) 1 NC_010407.1 hypothetical protein 2261119 6157777 CMS_2134 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710821.1 2260631 R 31964 CDS YP_001710822.1 170782489 6157778 complement(2261116..2262258) 1 NC_010407.1 hypothetical protein 2262258 6157778 CMS_2135 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710822.1 2261116 R 31964 CDS YP_001710823.1 170782490 6157779 2262390..2263328 1 NC_010407.1 hydrolase 2263328 6157779 CMS_2136 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710823.1 2262390 D 31964 CDS YP_001710824.1 170782491 6157780 complement(2263355..2263783) 1 NC_010407.1 hypothetical protein 2263783 6157780 CMS_2137 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710824.1 2263355 R 31964 CDS YP_001710825.1 170782492 6157781 2263940..2264476 1 NC_010407.1 ATP/GTP binding protein 2264476 6157781 CMS_2138 Clavibacter michiganensis subsp. sepedonicus ATP/GTP binding protein YP_001710825.1 2263940 D 31964 CDS YP_001710826.1 170782493 6157782 complement(2264483..2264851) 1 NC_010407.1 hypothetical protein 2264851 6157782 CMS_2139 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710826.1 2264483 R 31964 CDS YP_001710827.1 170782494 6157783 2264913..2265365 1 NC_010407.1 MarR family transcriptional regulator 2265365 6157783 CMS_2140 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001710827.1 2264913 D 31964 CDS YP_001710828.1 170782495 6157785 complement(2265599..2266888) 1 NC_010407.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2266888 purA 6157785 purA Clavibacter michiganensis subsp. sepedonicus adenylosuccinate synthetase YP_001710828.1 2265599 R 31964 CDS YP_001710829.1 170782496 6158895 complement(2266970..2267512) 1 NC_010407.1 hypothetical protein 2267512 6158895 CMS_2143 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710829.1 2266970 R 31964 CDS YP_001710830.1 170782497 6157786 2267570..2268748 1 NC_010407.1 nuclease 2268748 6157786 CMS_2144 Clavibacter michiganensis subsp. sepedonicus nuclease YP_001710830.1 2267570 D 31964 CDS YP_001710831.1 170782498 6157787 2268748..2271780 1 NC_010407.1 nuclease 2271780 6157787 CMS_2145 Clavibacter michiganensis subsp. sepedonicus nuclease YP_001710831.1 2268748 D 31964 CDS YP_001710832.1 170782499 6157788 complement(2271842..2272045) 1 NC_010407.1 hypothetical protein 2272045 6157788 CMS_2146 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710832.1 2271842 R 31964 CDS YP_001710833.1 170782500 6157790 2273688..2274380 1 NC_010407.1 TetR family transcriptional regulator 2274380 6157790 CMS_2149 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001710833.1 2273688 D 31964 CDS YP_001710834.1 170782501 6157791 2274377..2275072 1 NC_010407.1 hypothetical protein 2275072 6157791 CMS_2150 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710834.1 2274377 D 31964 CDS YP_001710835.1 170782502 6157792 2275069..2277174 1 NC_010407.1 ABC transporter 2277174 6157792 CMS_2151 Clavibacter michiganensis subsp. sepedonicus ABC transporter YP_001710835.1 2275069 D 31964 CDS YP_001710836.1 170782503 6157793 complement(2277194..2277481) 1 NC_010407.1 hypothetical protein 2277481 6157793 CMS_2152 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710836.1 2277194 R 31964 CDS YP_001710837.1 170782504 6157794 complement(2277478..2278098) 1 NC_010407.1 hypothetical protein 2278098 6157794 CMS_2153 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710837.1 2277478 R 31964 CDS YP_001710838.1 170782505 6157795 2278161..2280083 1 NC_010407.1 hypothetical protein 2280083 6157795 CMS_2154 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710838.1 2278161 D 31964 CDS YP_001710839.1 170782506 6157796 2280219..2280455 1 NC_010407.1 DNA-binding protein 2280455 6157796 CMS_2155 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001710839.1 2280219 D 31964 CDS YP_001710840.1 170782507 6157797 2280455..2281759 1 NC_010407.1 hypothetical protein 2281759 6157797 CMS_2156 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710840.1 2280455 D 31964 CDS YP_001710841.1 170782508 6157798 complement(2281786..2282280) 1 NC_010407.1 oxidoreductase 2282280 6157798 CMS_2157 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710841.1 2281786 R 31964 CDS YP_001710842.1 170782509 6157799 complement(2282277..2282603) 1 NC_010407.1 ferredoxin 2282603 6157799 CMS_2158 Clavibacter michiganensis subsp. sepedonicus ferredoxin YP_001710842.1 2282277 R 31964 CDS YP_001710843.1 170782510 6157800 2282710..2283180 1 NC_010407.1 MerR family transcriptional regulator 2283180 6157800 CMS_2159 Clavibacter michiganensis subsp. sepedonicus MerR family transcriptional regulator YP_001710843.1 2282710 D 31964 CDS YP_001710844.1 170782511 6157801 complement(2283210..2284172) 1 NC_010407.1 N/R; insertion element IS1121 transposase 2284172 6157801 CMS_2160 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710844.1 2283210 R 31964 CDS YP_001710845.1 170782512 6157802 complement(2284270..2286555) 1 NC_010407.1 Repetetive N-terminal region may not be encoded; ATP-dependent helicase 2286555 deaD 6157802 deaD Clavibacter michiganensis subsp. sepedonicus ATP-dependent helicase YP_001710845.1 2284270 R 31964 CDS YP_001710846.1 170782513 6157803 2290301..2290699 1 NC_010407.1 hypothetical protein 2290699 6157803 CMS_2164 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710846.1 2290301 D 31964 CDS YP_001710847.1 170782514 6157804 2290717..2291115 1 NC_010407.1 lipoprotein 2291115 6157804 CMS_2165 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001710847.1 2290717 D 31964 CDS YP_001710848.1 170782515 6157805 complement(2291112..2292191) 1 NC_010407.1 hypothetical protein 2292191 6157805 CMS_2166 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710848.1 2291112 R 31964 CDS YP_001710849.1 170782516 6157806 complement(2292332..2293294) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2293294 6157806 CMS_2167 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710849.1 2292332 R 31964 CDS YP_001710850.1 170782517 6157807 complement(2293392..2294438) 1 NC_010407.1 LysR family trancsriptional regulator 2294438 6157807 CMS_2168 Clavibacter michiganensis subsp. sepedonicus LysR family trancsriptional regulator YP_001710850.1 2293392 R 31964 CDS YP_001710851.1 170782518 6157808 2294517..2294948 1 NC_010407.1 hypothetical protein 2294948 6157808 CMS_2169 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710851.1 2294517 D 31964 CDS YP_001710852.1 170782519 6157809 2295058..2296536 1 NC_010407.1 hypothetical protein 2296536 6157809 CMS_2170 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710852.1 2295058 D 31964 CDS YP_001710853.1 170782520 6157810 complement(2296633..2298135) 1 NC_010407.1 transport protein 2298135 6157810 CMS_2171 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710853.1 2296633 R 31964 CDS YP_001710854.1 170782521 6157811 2298226..2300163 1 NC_010407.1 two component system sensor kinase 2300163 6157811 CMS_2172 Clavibacter michiganensis subsp. sepedonicus two component system sensor kinase YP_001710854.1 2298226 D 31964 CDS YP_001710855.1 170782522 6157812 2300160..2300825 1 NC_010407.1 two-component response regulator 2300825 6157812 CMS_2173 Clavibacter michiganensis subsp. sepedonicus two-component response regulator YP_001710855.1 2300160 D 31964 CDS YP_001710856.1 170782523 6157813 2300872..2301219 1 NC_010407.1 hypothetical protein 2301219 6157813 CMS_2174 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710856.1 2300872 D 31964 CDS YP_001710857.1 170782524 6157814 complement(2301574..2301963) 1 NC_010407.1 NUDIX hydrolase 2301963 6157814 CMS_2175 Clavibacter michiganensis subsp. sepedonicus NUDIX hydrolase YP_001710857.1 2301574 R 31964 CDS YP_001710858.1 170782525 6157816 2303467..2304372 1 NC_010407.1 hydrolase 2304372 6157816 CMS_2177 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710858.1 2303467 D 31964 CDS YP_001710859.1 170782526 6157817 2304518..2306041 1 NC_010407.1 endo-polygalacturonase 2306041 peh 6157817 peh Clavibacter michiganensis subsp. sepedonicus endo-polygalacturonase YP_001710859.1 2304518 D 31964 CDS YP_001710860.1 170782527 6158856 complement(2306114..2307367) 1 NC_010407.1 hypothetical protein 2307367 6158856 CMS_2179 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710860.1 2306114 R 31964 CDS YP_001710861.1 170782528 6157818 complement(2307410..2308072) 1 NC_010407.1 hypothetical protein 2308072 6157818 CMS_2180 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710861.1 2307410 R 31964 CDS YP_001710862.1 170782529 6157819 complement(2308139..2309248) 1 NC_010407.1 hypothetical protein 2309248 6157819 CMS_2181 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710862.1 2308139 R 31964 CDS YP_001710863.1 170782530 6157820 complement(2309517..2310386) 1 NC_010407.1 hypothetical protein 2310386 6157820 CMS_2182 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710863.1 2309517 R 31964 CDS YP_001710864.1 170782531 6157821 complement(2310454..2310915) 1 NC_010407.1 MarR family transcriptional regulator 2310915 6157821 CMS_2183 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001710864.1 2310454 R 31964 CDS YP_001710865.1 170782532 6157822 complement(2311040..2311741) 1 NC_010407.1 hydrolase 2311741 6157822 CMS_2184 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710865.1 2311040 R 31964 CDS YP_001710866.1 170782533 6157824 complement(2312133..2312828) 1 NC_010407.1 hypothetical protein 2312828 6157824 CMS_2186 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710866.1 2312133 R 31964 CDS YP_001710867.1 170782534 6157825 complement(2312939..2313199) 1 NC_010407.1 regulatory protein 2313199 6157825 CMS_2187 Clavibacter michiganensis subsp. sepedonicus regulatory protein YP_001710867.1 2312939 R 31964 CDS YP_001710868.1 170782535 6157826 complement(2313227..2314144) 1 NC_010407.1 hypothetical protein 2314144 6157826 CMS_2188 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710868.1 2313227 R 31964 CDS YP_001710869.1 170782536 6157827 2314315..2314752 1 NC_010407.1 hypothetical protein 2314752 6157827 CMS_2189 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710869.1 2314315 D 31964 CDS YP_001710870.1 170782537 6157828 2314797..2315315 1 NC_010407.1 acetyl transferase 2315315 6157828 CMS_2190 Clavibacter michiganensis subsp. sepedonicus acetyl transferase YP_001710870.1 2314797 D 31964 CDS YP_001710871.1 170782538 6157829 complement(2315326..2316288) 1 NC_010407.1 N/R; insertion element IS1121 transposase 2316288 6157829 CMS_2191 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710871.1 2315326 R 31964 CDS YP_001710872.1 170782539 6157830 2316499..2317461 1 NC_010407.1 N/R; insertion element ISCmi2 transposase 2317461 6157830 CMS_2192 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710872.1 2316499 D 31964 CDS YP_001710873.1 170782540 6157831 complement(2317458..2317949) 1 NC_010407.1 hypothetical protein 2317949 6157831 CMS_2193 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710873.1 2317458 R 31964 CDS YP_001710874.1 170782541 6157832 2318114..2319436 1 NC_010407.1 4-aminobutyrate aminotransferase 2319436 gabT 6157832 gabT Clavibacter michiganensis subsp. sepedonicus 4-aminobutyrate aminotransferase YP_001710874.1 2318114 D 31964 CDS YP_001710875.1 170782542 6158705 2319436..2320446 1 NC_010407.1 L-asparaginase II 2320446 ansA 6158705 ansA Clavibacter michiganensis subsp. sepedonicus L-asparaginase II YP_001710875.1 2319436 D 31964 CDS YP_001710876.1 170782543 6158596 complement(2320436..2323870) 1 NC_010407.1 FtsK/SpoIIIE-related protein 2323870 6158596 CMS_2196 Clavibacter michiganensis subsp. sepedonicus FtsK/SpoIIIE-related protein YP_001710876.1 2320436 R 31964 CDS YP_001710877.1 170782544 6157833 complement(2323961..2326474) 1 NC_010407.1 hypothetical protein 2326474 6157833 CMS_2197 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710877.1 2323961 R 31964 CDS YP_001710878.1 170782545 6157834 complement(2326471..2328048) 1 NC_010407.1 hypothetical protein 2328048 6157834 CMS_2198 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710878.1 2326471 R 31964 CDS YP_001710879.1 170782546 6157835 complement(2328045..2329049) 1 NC_010407.1 ATPase 2329049 6157835 CMS_2199 Clavibacter michiganensis subsp. sepedonicus ATPase YP_001710879.1 2328045 R 31964 CDS YP_001710880.1 170782547 6157836 complement(2329116..2335139) 1 NC_010407.1 large exported protein 2335139 6157836 CMS_2200 Clavibacter michiganensis subsp. sepedonicus large exported protein YP_001710880.1 2329116 R 31964 CDS YP_001710881.1 170782548 6157838 complement(2336852..2338177) 1 NC_010407.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2338177 gltA 6157838 gltA Clavibacter michiganensis subsp. sepedonicus type II citrate synthase YP_001710881.1 2336852 R 31964 CDS YP_001710882.1 170782549 6158727 complement(2338340..2339464) 1 NC_010407.1 catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; N-succinyldiaminopimelate aminotransferase 2339464 6158727 CMS_2204 Clavibacter michiganensis subsp. sepedonicus N-succinyldiaminopimelate aminotransferase YP_001710882.1 2338340 R 31964 CDS YP_001710883.1 170782550 6157839 complement(2339470..2339790) 1 NC_010407.1 ferredoxin 2339790 6157839 CMS_2205 Clavibacter michiganensis subsp. sepedonicus ferredoxin YP_001710883.1 2339470 R 31964 CDS YP_001710884.1 170782551 6157840 complement(2339831..2341189) 1 NC_010407.1 hypothetical protein 2341189 6157840 CMS_2206 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710884.1 2339831 R 31964 CDS YP_001710885.1 170782552 6157841 2341369..2342268 1 NC_010407.1 cation permease 2342268 6157841 CMS_2207 Clavibacter michiganensis subsp. sepedonicus cation permease YP_001710885.1 2341369 D 31964 CDS YP_001710886.1 170782553 6157842 2342339..2343556 1 NC_010407.1 lipoprotein 2343556 6157842 CMS_2208 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001710886.1 2342339 D 31964 CDS YP_001710887.1 170782554 6157843 2343556..2344908 1 NC_010407.1 peroxidase 2344908 6157843 CMS_2209 Clavibacter michiganensis subsp. sepedonicus peroxidase YP_001710887.1 2343556 D 31964 CDS YP_001710888.1 170782555 6157844 complement(2344938..2345348) 1 NC_010407.1 hypothetical protein 2345348 6157844 CMS_2210 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710888.1 2344938 R 31964 CDS YP_001710889.1 170782556 6157845 complement(2345454..2347361) 1 NC_010407.1 GTP-binding elongation factor 2347361 6157845 CMS_2211 Clavibacter michiganensis subsp. sepedonicus GTP-binding elongation factor YP_001710889.1 2345454 R 31964 CDS YP_001710890.1 170782557 6157846 complement(2347476..2349329) 1 NC_010407.1 Similar to CMS2218; solute-binding transport protein 2349329 6157846 CMS_2212 Clavibacter michiganensis subsp. sepedonicus solute-binding transport protein YP_001710890.1 2347476 R 31964 CDS YP_001710891.1 170782558 6157847 complement(2349429..2351120) 1 NC_010407.1 nucleotide-binding ABC transporter subunit 2351120 6157847 CMS_2213 Clavibacter michiganensis subsp. sepedonicus nucleotide-binding ABC transporter subunit YP_001710891.1 2349429 R 31964 CDS YP_001710892.1 170782559 6157848 2351192..2351797 1 NC_010407.1 hypothetical protein 2351797 6157848 CMS_2214 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710892.1 2351192 D 31964 CDS YP_001710893.1 170782560 6157849 complement(2351851..2352933) 1 NC_010407.1 transport protein 2352933 6157849 CMS_2215 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710893.1 2351851 R 31964 CDS YP_001710894.1 170782561 6157850 complement(2353034..2354545) 1 NC_010407.1 transport protein 2354545 6157850 CMS_2216 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710894.1 2353034 R 31964 CDS YP_001710895.1 170782562 6157852 2356871..2357686 1 NC_010407.1 hypothetical protein 2357686 6157852 CMS_2219 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710895.1 2356871 D 31964 CDS YP_001710896.1 170782563 6157853 2357794..2358201 1 NC_010407.1 hypothetical protein 2358201 6157853 CMS_2220 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710896.1 2357794 D 31964 CDS YP_001710897.1 170782564 6157854 2358198..2359820 1 NC_010407.1 transport protein 2359820 6157854 CMS_2221 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710897.1 2358198 D 31964 CDS YP_001710898.1 170782565 6157855 complement(2359921..2362896) 1 NC_010407.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 2362896 gcvP 6157855 gcvP Clavibacter michiganensis subsp. sepedonicus glycine dehydrogenase YP_001710898.1 2359921 R 31964 CDS YP_001710899.1 170782566 6158714 complement(2362893..2363264) 1 NC_010407.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 2363264 gcvH 6158714 gcvH Clavibacter michiganensis subsp. sepedonicus glycine cleavage system protein H YP_001710899.1 2362893 R 31964 CDS YP_001710900.1 170782567 6158713 complement(2363261..2364460) 1 NC_010407.1 glycine cleavage system T protein 2364460 gcvT 6158713 gcvT Clavibacter michiganensis subsp. sepedonicus glycine cleavage system T protein YP_001710900.1 2363261 R 31964 CDS YP_001710901.1 170782568 6158715 complement(2364830..2365285) 1 NC_010407.1 hypothetical protein 2365285 6158715 CMS_2225 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710901.1 2364830 R 31964 CDS YP_001710902.1 170782569 6157856 2365413..2365784 1 NC_010407.1 hypothetical protein 2365784 6157856 CMS_2226 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710902.1 2365413 D 31964 CDS YP_001710903.1 170782570 6157857 complement(2365808..2366770) 1 NC_010407.1 N/R; insertion element IS1121 transposase 2366770 6157857 CMS_2227 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710903.1 2365808 R 31964 CDS YP_001710904.1 170782571 6157858 complement(2366895..2367608) 1 NC_010407.1 hypothetical protein 2367608 6157858 CMS_2228 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710904.1 2366895 R 31964 CDS YP_001710905.1 170782572 6157859 complement(2367620..2368420) 1 NC_010407.1 contains 3x internal repeat; hypothetical protein 2368420 6157859 CMS_2229 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710905.1 2367620 R 31964 CDS YP_001710906.1 170782573 6157860 complement(2368417..2369565) 1 NC_010407.1 hypothetical protein 2369565 6157860 CMS_2230 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710906.1 2368417 R 31964 CDS YP_001710907.1 170782574 6157861 2369628..2370227 1 NC_010407.1 acetyl transferase 2370227 6157861 CMS_2231 Clavibacter michiganensis subsp. sepedonicus acetyl transferase YP_001710907.1 2369628 D 31964 CDS YP_001710908.1 170782575 6157862 2370242..2370772 1 NC_010407.1 acetyltransferase 2370772 6157862 CMS_2232 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001710908.1 2370242 D 31964 CDS YP_001710909.1 170782576 6157863 complement(2370858..2371862) 1 NC_010407.1 hypothetical protein 2371862 6157863 CMS_2233 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710909.1 2370858 R 31964 CDS YP_001710910.1 170782577 6157864 2372070..2372933 1 NC_010407.1 pectate lyase 2372933 6157864 CMS_2234 Clavibacter michiganensis subsp. sepedonicus pectate lyase YP_001710910.1 2372070 D 31964 CDS YP_001710911.1 170782578 6157865 complement(2373013..2374542) 1 NC_010407.1 catalase 2374542 katA 6157865 katA Clavibacter michiganensis subsp. sepedonicus catalase YP_001710911.1 2373013 R 31964 CDS YP_001710912.1 170782579 6158779 complement(2374619..2375110) 1 NC_010407.1 ferric uptake regulation protein 2375110 6158779 CMS_2236 Clavibacter michiganensis subsp. sepedonicus ferric uptake regulation protein YP_001710912.1 2374619 R 31964 CDS YP_001710913.1 170782580 6157866 2375217..2376206 1 NC_010407.1 oxidoreductase 2376206 6157866 CMS_2237 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710913.1 2375217 D 31964 CDS YP_001710914.1 170782581 6157867 2376352..2377896 1 NC_010407.1 hypothetical protein 2377896 6157867 CMS_2238 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710914.1 2376352 D 31964 CDS YP_001710915.1 170782582 6157868 2377893..2378924 1 NC_010407.1 hypothetical protein 2378924 6157868 CMS_2239 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710915.1 2377893 D 31964 CDS YP_001710916.1 170782583 6157869 2378911..2379918 1 NC_010407.1 oxidoreductase 2379918 6157869 CMS_2240 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710916.1 2378911 D 31964 CDS YP_001710917.1 170782584 6157870 2379915..2381177 1 NC_010407.1 radical SAM domain-containing protein 2381177 6157870 CMS_2241 Clavibacter michiganensis subsp. sepedonicus radical SAM domain-containing protein YP_001710917.1 2379915 D 31964 CDS YP_001710918.1 170782585 6157871 2381177..2382364 1 NC_010407.1 hypothetical protein 2382364 6157871 CMS_2242 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710918.1 2381177 D 31964 CDS YP_001710919.1 170782586 6157872 2382361..2383533 1 NC_010407.1 transport protein 2383533 6157872 CMS_2243 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710919.1 2382361 D 31964 CDS YP_001710920.1 170782587 6157873 complement(2383540..2384379) 1 NC_010407.1 hydrolase 2384379 6157873 CMS_2244 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710920.1 2383540 R 31964 CDS YP_001710921.1 170782588 6157874 2384408..2385082 1 NC_010407.1 GntR family transcriptional regulator 2385082 6157874 CMS_2245 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001710921.1 2384408 D 31964 CDS YP_001710922.1 170782589 6157875 complement(2385190..2386587) 1 NC_010407.1 transport protein 2386587 6157875 CMS_2246 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001710922.1 2385190 R 31964 CDS YP_001710923.1 170782590 6157876 2386753..2387436 1 NC_010407.1 hypothetical protein 2387436 6157876 CMS_2247 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710923.1 2386753 D 31964 CDS YP_001710924.1 170782591 6157877 2387532..2387924 1 NC_010407.1 Late stop compared to homologues; hypothetical protein 2387924 6157877 CMS_2248 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710924.1 2387532 D 31964 CDS YP_001710925.1 170782592 6157878 2387924..2388619 1 NC_010407.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 2388619 purQ 6157878 purQ Clavibacter michiganensis subsp. sepedonicus phosphoribosylformylglycinamidine synthase I YP_001710925.1 2387924 D 31964 CDS YP_001710926.1 170782593 6158904 2388616..2390979 1 NC_010407.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 2390979 purL 6158904 purL Clavibacter michiganensis subsp. sepedonicus phosphoribosylformylglycinamidine synthase II YP_001710926.1 2388616 D 31964 CDS YP_001710927.1 170782594 6158901 2390976..2391779 1 NC_010407.1 hydrolase 2391779 6158901 CMS_2251 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001710927.1 2390976 D 31964 CDS YP_001710928.1 170782595 6157879 2392285..2393079 1 NC_010407.1 hypothetical protein 2393079 6157879 CMS_2252 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710928.1 2392285 D 31964 CDS YP_001710929.1 170782596 6157880 2393280..2393996 1 NC_010407.1 lipoprotein 2393996 6157880 CMS_2253 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001710929.1 2393280 D 31964 CDS YP_001710930.1 170782597 6157881 2394100..2395125 1 NC_010407.1 acetyl transferase 2395125 6157881 CMS_2254 Clavibacter michiganensis subsp. sepedonicus acetyl transferase YP_001710930.1 2394100 D 31964 CDS YP_001710931.1 170782598 6157882 complement(2395448..2397727) 1 NC_010407.1 acyltransferase 2397727 6157882 CMS_2255 Clavibacter michiganensis subsp. sepedonicus acyltransferase YP_001710931.1 2395448 R 31964 CDS YP_001710932.1 170782599 6157883 2397966..2399378 1 NC_010407.1 polysaccharide biosynthesis protein 2399378 6157883 CMS_2256 Clavibacter michiganensis subsp. sepedonicus polysaccharide biosynthesis protein YP_001710932.1 2397966 D 31964 CDS YP_001710933.1 170782600 6157884 2399388..2400107 1 NC_010407.1 low molecular weight protein-tyrosine-phosphatase 2400107 ptpA 6157884 ptpA Clavibacter michiganensis subsp. sepedonicus low molecular weight protein-tyrosine-phosphatase YP_001710933.1 2399388 D 31964 CDS YP_001710934.1 170782601 6158888 2400319..2401674 1 NC_010407.1 initial glycosyl transferase 2401674 6158888 CMS_2258 Clavibacter michiganensis subsp. sepedonicus initial glycosyl transferase YP_001710934.1 2400319 D 31964 CDS YP_001710935.1 170782602 6157885 2401674..2402804 1 NC_010407.1 glycosyl transferase 2402804 6157885 CMS_2259 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710935.1 2401674 D 31964 CDS YP_001710936.1 170782603 6157886 2402801..2403850 1 NC_010407.1 glycosyl transferase 2403850 6157886 CMS_2260 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001710936.1 2402801 D 31964 CDS YP_001710937.1 170782604 6157887 2403847..2405037 1 NC_010407.1 polysaccharide export protein 2405037 wzx2 6157887 wzx2 Clavibacter michiganensis subsp. sepedonicus polysaccharide export protein YP_001710937.1 2403847 D 31964 CDS YP_001710938.1 170782605 6159096 2405034..2406083 1 NC_010407.1 transferase 2406083 6159096 CMS_2262 Clavibacter michiganensis subsp. sepedonicus transferase YP_001710938.1 2405034 D 31964 CDS YP_001710940.1 170782606 6157889 2408845..2410743 1 NC_010407.1 hypothetical protein 2410743 6157889 CMS_2266 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710940.1 2408845 D 31964 CDS YP_001710941.1 170782607 6157890 2410899..2411483 1 NC_010407.1 hypothetical protein 2411483 6157890 CMS_2267 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710941.1 2410899 D 31964 CDS YP_001710942.1 170782608 6157891 2411551..2412372 1 NC_010407.1 hypothetical protein 2412372 6157891 CMS_2268 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710942.1 2411551 D 31964 CDS YP_001710943.1 170782609 6157892 2412488..2413471 1 NC_010407.1 hypothetical protein 2413471 6157892 CMS_2269 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710943.1 2412488 D 31964 CDS YP_001710944.1 170782610 6157893 complement(2413681..2415051) 1 NC_010407.1 efflux protein 2415051 6157893 CMS_2270 Clavibacter michiganensis subsp. sepedonicus efflux protein YP_001710944.1 2413681 R 31964 CDS YP_001710945.1 170782611 6166459 complement(2415048..2415590) 1 NC_010407.1 adenine phosphoribosyltransferase 2415590 6166459 CMS_2270b Clavibacter michiganensis subsp. sepedonicus adenine phosphoribosyltransferase YP_001710945.1 2415048 R 31964 CDS YP_001710946.1 170782612 6157894 complement(2415587..2416279) 1 NC_010407.1 sugar-phosphate epimerase 2416279 6157894 CMS_2275 Clavibacter michiganensis subsp. sepedonicus sugar-phosphate epimerase YP_001710946.1 2415587 R 31964 CDS YP_001710947.1 170782613 6157895 complement(2416276..2417259) 1 NC_010407.1 sugar-phosphate pyrophosphokinase 2417259 6157895 CMS_2276 Clavibacter michiganensis subsp. sepedonicus sugar-phosphate pyrophosphokinase YP_001710947.1 2416276 R 31964 CDS YP_001710948.1 170782614 6157896 complement(2417256..2417888) 1 NC_010407.1 hypothetical protein 2417888 6157896 CMS_2278 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710948.1 2417256 R 31964 CDS YP_001710949.1 170782615 6157899 complement(2419736..2420119) 1 NC_010407.1 chorismate mutase 2420119 6157899 CMS_2281 Clavibacter michiganensis subsp. sepedonicus chorismate mutase YP_001710949.1 2419736 R 31964 CDS YP_001710950.1 170782616 6157900 complement(2420202..2420621) 1 NC_010407.1 stress induced protein 2420621 6157900 CMS_2282 Clavibacter michiganensis subsp. sepedonicus stress induced protein YP_001710950.1 2420202 R 31964 CDS YP_001710951.1 170782617 6157901 complement(2420793..2421491) 1 NC_010407.1 two component system response regulator 2421491 6157901 CMS_2283 Clavibacter michiganensis subsp. sepedonicus two component system response regulator YP_001710951.1 2420793 R 31964 CDS YP_001710952.1 170782618 6157902 complement(2421488..2422924) 1 NC_010407.1 two-component system sensor kinase 2422924 6157902 CMS_2284 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001710952.1 2421488 R 31964 CDS YP_001710953.1 170782619 6157903 complement(2422966..2424999) 1 NC_010407.1 beta-lactamase 2424999 6157903 CMS_2285 Clavibacter michiganensis subsp. sepedonicus beta-lactamase YP_001710953.1 2422966 R 31964 CDS YP_001710954.1 170782620 6157904 complement(2425218..2425610) 1 NC_010407.1 resistance protein 2425610 6157904 CMS_2286 Clavibacter michiganensis subsp. sepedonicus resistance protein YP_001710954.1 2425218 R 31964 CDS YP_001710955.1 170782621 6157905 complement(2425607..2425879) 1 NC_010407.1 hypothetical protein 2425879 6157905 CMS_2287 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710955.1 2425607 R 31964 CDS YP_001710956.1 170782622 6157906 2426167..2426661 1 NC_010407.1 hypothetical protein 2426661 6157906 CMS_2288 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710956.1 2426167 D 31964 CDS YP_001710957.1 170782623 6157907 complement(2426716..2427360) 1 NC_010407.1 acetyl transferase 2427360 6157907 CMS_2289 Clavibacter michiganensis subsp. sepedonicus acetyl transferase YP_001710957.1 2426716 R 31964 CDS YP_001710958.1 170782624 6157908 complement(2427446..2428408) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2428408 6157908 CMS_2290 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001710958.1 2427446 R 31964 CDS YP_001710959.1 170782625 6157909 complement(2428506..2429276) 1 NC_010407.1 C-terminal extension relative to homologues; sortase-sorted copper resistance surface protein 2429276 6157909 CMS_2291 Clavibacter michiganensis subsp. sepedonicus sortase-sorted copper resistance surface protein YP_001710959.1 2428506 R 31964 CDS YP_001710960.1 170782626 6157910 2429379..2430686 1 NC_010407.1 cysteine desulfurase 2430686 sufS 6157910 sufS Clavibacter michiganensis subsp. sepedonicus cysteine desulfurase YP_001710960.1 2429379 D 31964 CDS YP_001710961.1 170782627 6159002 2430683..2431126 1 NC_010407.1 NifU-like protein 2431126 6159002 CMS_2293 Clavibacter michiganensis subsp. sepedonicus NifU-like protein YP_001710961.1 2430683 D 31964 CDS YP_001710962.1 170782628 6157911 2431227..2431622 1 NC_010407.1 hypothetical protein 2431622 6157911 CMS_2294 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710962.1 2431227 D 31964 CDS YP_001710963.1 170782629 6157912 complement(2431648..2432202) 1 NC_010407.1 acetyl tranferase 2432202 6157912 CMS_2295 Clavibacter michiganensis subsp. sepedonicus acetyl tranferase YP_001710963.1 2431648 R 31964 CDS YP_001710964.1 170782630 6157913 2432320..2433369 1 NC_010407.1 hypothetical protein 2433369 6157913 CMS_2296 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710964.1 2432320 D 31964 CDS YP_001710965.1 170782631 6157914 complement(2433386..2433949) 1 NC_010407.1 hypothetical protein 2433949 6157914 CMS_2297 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710965.1 2433386 R 31964 CDS YP_001710966.1 170782632 6157915 complement(2434009..2434413) 1 NC_010407.1 hypothetical protein 2434413 6157915 CMS_2298 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710966.1 2434009 R 31964 CDS YP_001710967.1 170782633 6157916 2434630..2435052 1 NC_010407.1 hypothetical protein 2435052 6157916 CMS_2299 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710967.1 2434630 D 31964 CDS YP_001710968.1 170782634 6157917 2435128..2436594 1 NC_010407.1 amino acid permease 2436594 6157917 CMS_2300 Clavibacter michiganensis subsp. sepedonicus amino acid permease YP_001710968.1 2435128 D 31964 CDS YP_001710969.1 170782635 6157918 2436597..2437052 1 NC_010407.1 stress protein 2437052 6157918 CMS_2301 Clavibacter michiganensis subsp. sepedonicus stress protein YP_001710969.1 2436597 D 31964 CDS YP_001710970.1 170782636 6157919 2437259..2438221 1 NC_010407.1 hypothetical protein 2438221 6157919 CMS_2302 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710970.1 2437259 D 31964 CDS YP_001710971.1 170782637 6157920 2438357..2439319 1 NC_010407.1 N/R/C; insertion element ISCmi2 transposase 2439319 6157920 CMS_2303 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710971.1 2438357 D 31964 CDS YP_001710972.1 170782638 6157921 complement(2439360..2440274) 1 NC_010407.1 hypothetical protein 2440274 6157921 CMS_2304 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710972.1 2439360 R 31964 CDS YP_001710973.1 170782639 6157922 complement(2440293..2441231) 1 NC_010407.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2441231 ispE 6157922 ispE Clavibacter michiganensis subsp. sepedonicus 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001710973.1 2440293 R 31964 CDS YP_001710974.1 170782640 6158774 complement(2441242..2442159) 1 NC_010407.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 2442159 ksgA 6158774 ksgA Clavibacter michiganensis subsp. sepedonicus dimethyladenosine transferase YP_001710974.1 2441242 R 31964 CDS YP_001710975.1 170782641 6157923 complement(2442156..2443139) 1 NC_010407.1 deoxyribonuclease 2443139 6157923 CMS_2307 Clavibacter michiganensis subsp. sepedonicus deoxyribonuclease YP_001710975.1 2442156 R 31964 CDS YP_001710976.1 170782642 6157924 complement(2443178..2444764) 1 NC_010407.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2444764 metG 6157924 metG Clavibacter michiganensis subsp. sepedonicus methionyl-tRNA synthetase YP_001710976.1 2443178 R 31964 CDS YP_001710977.1 170782643 6158810 complement(2444888..2445076) 1 NC_010407.1 hypothetical protein 2445076 6158810 CMS_2309 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710977.1 2444888 R 31964 CDS YP_001710978.1 170782644 6157925 2445224..2445406 1 NC_010407.1 hypothetical protein 2445406 6157925 CMS_2310 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710978.1 2445224 D 31964 CDS YP_001710979.1 170782645 6157926 complement(2445449..2446198) 1 NC_010407.1 hypothetical protein 2446198 6157926 CMS_2311 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710979.1 2445449 R 31964 CDS YP_001710980.1 170782646 6157927 complement(2446518..2447669) 1 NC_010407.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase 2447669 6157927 CMS_2312 Clavibacter michiganensis subsp. sepedonicus citrate synthase YP_001710980.1 2446518 R 31964 CDS YP_001710981.1 170782647 6157928 2447928..2449391 1 NC_010407.1 oxidoreductase 2449391 6157928 CMS_2313 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001710981.1 2447928 D 31964 CDS YP_001710982.1 170782648 6157930 complement(2450052..2450486) 1 NC_010407.1 hypothetical protein 2450486 6157930 CMS_2315 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710982.1 2450052 R 31964 CDS YP_001710983.1 170782649 6157931 complement(2450483..2450980) 1 NC_010407.1 lipoprotein 2450980 6157931 CMS_2316 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001710983.1 2450483 R 31964 CDS YP_001710984.1 170782650 6157932 2451136..2452539 1 NC_010407.1 hypothetical protein 2452539 6157932 CMS_2317 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710984.1 2451136 D 31964 CDS YP_001710985.1 170782651 6157933 2452536..2455121 1 NC_010407.1 phosphatase 2455121 6157933 CMS_2318 Clavibacter michiganensis subsp. sepedonicus phosphatase YP_001710985.1 2452536 D 31964 CDS YP_001710986.1 170782652 6157934 complement(2455340..2456254) 1 NC_010407.1 methylisocitrate lyase 2456254 6157934 CMS_2319 Clavibacter michiganensis subsp. sepedonicus methylisocitrate lyase YP_001710986.1 2455340 R 31964 CDS YP_001710987.1 170782653 6157935 complement(2456254..2457804) 1 NC_010407.1 2-methylcitrate dehydratase 2457804 6157935 CMS_2320 Clavibacter michiganensis subsp. sepedonicus 2-methylcitrate dehydratase YP_001710987.1 2456254 R 31964 CDS YP_001710988.1 170782654 6157936 2457906..2458844 1 NC_010407.1 acetyl transferase 2458844 6157936 CMS_2321 Clavibacter michiganensis subsp. sepedonicus acetyl transferase YP_001710988.1 2457906 D 31964 CDS YP_001710989.1 170782655 6157937 2458879..2459406 1 NC_010407.1 hypothetical protein 2459406 6157937 CMS_2322 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710989.1 2458879 D 31964 CDS YP_001710990.1 170782656 6157938 2459874..2461412 1 NC_010407.1 hypothetical protein 2461412 6157938 CMS_2323 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710990.1 2459874 D 31964 CDS YP_001710991.1 170782657 6157939 2461409..2462065 1 NC_010407.1 hypothetical protein 2462065 6157939 CMS_2324 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710991.1 2461409 D 31964 CDS YP_001710992.1 170782658 6157940 2462128..2463231 1 NC_010407.1 hypothetical protein 2463231 6157940 CMS_2325 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710992.1 2462128 D 31964 CDS YP_001710993.1 170782659 6157941 complement(2463238..2464152) 1 NC_010407.1 hypothetical protein 2464152 6157941 CMS_2326 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710993.1 2463238 R 31964 CDS YP_001710994.1 170782660 6157942 2464316..2464849 1 NC_010407.1 hypothetical protein 2464849 6157942 CMS_2327 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710994.1 2464316 D 31964 CDS YP_001710995.1 170782661 6157943 2464946..2465908 1 NC_010407.1 N; insertion element ISCmi2 transposase 2465908 6157943 CMS_2328 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001710995.1 2464946 D 31964 CDS YP_001710996.1 170782662 6157944 complement(2465921..2466736) 1 NC_010407.1 methyltransferase 2466736 6157944 CMS_2329 Clavibacter michiganensis subsp. sepedonicus methyltransferase YP_001710996.1 2465921 R 31964 CDS YP_001710997.1 170782663 6157945 complement(2466802..2467059) 1 NC_010407.1 hypothetical protein 2467059 6157945 CMS_2330 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710997.1 2466802 R 31964 CDS YP_001710998.1 170782664 6157946 2467488..2468108 1 NC_010407.1 N-terminal extension relative to homologues; hypothetical protein 2468108 6157946 CMS_2332 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710998.1 2467488 D 31964 CDS YP_001710999.1 170782665 6157947 2468285..2470531 1 NC_010407.1 hypothetical protein 2470531 6157947 CMS_2333 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001710999.1 2468285 D 31964 CDS YP_001711000.1 170782666 6157948 complement(2470572..2470901) 1 NC_010407.1 hypothetical protein 2470901 6157948 CMS_2334 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711000.1 2470572 R 31964 CDS YP_001711001.1 170782667 6157949 complement(2470901..2471455) 1 NC_010407.1 hypothetical protein 2471455 6157949 CMS_2335 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711001.1 2470901 R 31964 CDS YP_001711002.1 170782668 6157950 2471682..2473406 1 NC_010407.1 glycosyl transferase 2473406 6157950 CMS_2336 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001711002.1 2471682 D 31964 CDS YP_001711003.1 170782669 6157951 2473406..2474410 1 NC_010407.1 hypothetical protein 2474410 6157951 CMS_2337 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711003.1 2473406 D 31964 CDS YP_001711004.1 170782670 6157952 complement(2474539..2474910) 1 NC_010407.1 hypothetical protein 2474910 6157952 CMS_2338 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711004.1 2474539 R 31964 CDS YP_001711005.1 170782671 6157953 complement(2474987..2475694) 1 NC_010407.1 transcriptional regulator 2475694 6157953 CMS_2339 Clavibacter michiganensis subsp. sepedonicus transcriptional regulator YP_001711005.1 2474987 R 31964 CDS YP_001711006.1 170782672 6157954 2475851..2477902 1 NC_010407.1 Contains extra C-terminal CoA-binding domain fusion relative to homologues; O-acetylhomoserine (thiol)-lyase 2477902 cysD 6157954 cysD Clavibacter michiganensis subsp. sepedonicus O-acetylhomoserine (thiol)-lyase YP_001711006.1 2475851 D 31964 CDS YP_001711007.1 170782673 6158649 complement(2477913..2478875) 1 NC_010407.1 N; insertion element IS1121 transposase 2478875 6158649 CMS_2341 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711007.1 2477913 R 31964 CDS YP_001711008.1 170782674 6157955 complement(2479023..2479532) 1 NC_010407.1 hypothetical protein 2479532 6157955 CMS_2342 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711008.1 2479023 R 31964 CDS YP_001711009.1 170782675 6157956 2479717..2479977 1 NC_010407.1 hypothetical protein 2479977 6157956 CMS_2343 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711009.1 2479717 D 31964 CDS YP_001711010.1 170782676 6157957 2480038..2480790 1 NC_010407.1 hypothetical protein 2480790 6157957 CMS_2344 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711010.1 2480038 D 31964 CDS YP_001711011.1 170782677 6157958 2480800..2482167 1 NC_010407.1 L-serine dehydratase 2482167 sdaA 6157958 sdaA Clavibacter michiganensis subsp. sepedonicus L-serine dehydratase YP_001711011.1 2480800 D 31964 CDS YP_001711012.1 170782678 6158976 2482205..2482603 1 NC_010407.1 hypothetical protein 2482603 6158976 CMS_2346 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711012.1 2482205 D 31964 CDS YP_001711013.1 170782679 6157959 complement(2482642..2483604) 1 NC_010407.1 N; insertion element IS1121 transposase 2483604 6157959 CMS_2347 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711013.1 2482642 R 31964 CDS YP_001711014.1 170782680 6157960 complement(2483702..2484808) 1 NC_010407.1 hypothetical protein 2484808 6157960 CMS_2348 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711014.1 2483702 R 31964 CDS YP_001711015.1 170782681 6157961 complement(2484805..2485599) 1 NC_010407.1 IclR family transcriptional regulator 2485599 6157961 CMS_2349 Clavibacter michiganensis subsp. sepedonicus IclR family transcriptional regulator YP_001711015.1 2484805 R 31964 CDS YP_001711016.1 170782682 6157962 complement(2485593..2486402) 1 NC_010407.1 hypothetical protein 2486402 6157962 CMS_2350 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711016.1 2485593 R 31964 CDS YP_001711017.1 170782683 6157963 2486513..2487862 1 NC_010407.1 substrate-binding lipoprotein 2487862 6157963 CMS_2351 Clavibacter michiganensis subsp. sepedonicus substrate-binding lipoprotein YP_001711017.1 2486513 D 31964 CDS YP_001711018.1 170782684 6157964 2487859..2488821 1 NC_010407.1 inregral membrane transport 2488821 6157964 CMS_2352 Clavibacter michiganensis subsp. sepedonicus inregral membrane transport YP_001711018.1 2487859 D 31964 CDS YP_001711019.1 170782685 6157965 2488818..2489723 1 NC_010407.1 transport protein 2489723 6157965 CMS_2353 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711019.1 2488818 D 31964 CDS YP_001711020.1 170782686 6157966 2489728..2490960 1 NC_010407.1 glucarate dehydratase 2490960 gudD 6157966 gudD Clavibacter michiganensis subsp. sepedonicus glucarate dehydratase YP_001711020.1 2489728 D 31964 CDS YP_001711021.1 170782687 6158738 2490960..2491904 1 NC_010407.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 2491904 6158738 CMS_2355 Clavibacter michiganensis subsp. sepedonicus 5-dehydro-4-deoxyglucarate dehydratase YP_001711021.1 2490960 D 31964 CDS YP_001711022.1 170782688 6157967 2492006..2492968 1 NC_010407.1 N; insertion element ISCmi2 transposase 2492968 6157967 CMS_2356 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001711022.1 2492006 D 31964 CDS YP_001711023.1 170782689 6157968 complement(2492965..2494896) 1 NC_010407.1 hypothetical protein 2494896 6157968 CMS_2357 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711023.1 2492965 R 31964 CDS YP_001711024.1 170782690 6157969 complement(2494936..2496102) 1 NC_010407.1 cation transport protein 2496102 6157969 CMS_2358 Clavibacter michiganensis subsp. sepedonicus cation transport protein YP_001711024.1 2494936 R 31964 CDS YP_001711025.1 170782691 6158663 complement(2496997..2498595) 1 NC_010407.1 long-chain-fatty-acid-CoA ligase 2498595 6158663 CMS_2360 Clavibacter michiganensis subsp. sepedonicus long-chain-fatty-acid-CoA ligase YP_001711025.1 2496997 R 31964 CDS YP_001711026.1 170782692 6157971 2498720..2502538 1 NC_010407.1 ATP-dependent helicase 2502538 6157971 CMS_2361 Clavibacter michiganensis subsp. sepedonicus ATP-dependent helicase YP_001711026.1 2498720 D 31964 CDS YP_001711027.1 170782693 6157972 2502757..2504463 1 NC_010407.1 hypothetical protein 2504463 6157972 CMS_2362 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711027.1 2502757 D 31964 CDS YP_001711028.1 170782694 6157973 2504460..2505263 1 NC_010407.1 GntR family transcriptional regulator 2505263 6157973 CMS_2363 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001711028.1 2504460 D 31964 CDS YP_001711029.1 170782695 6157974 2505363..2508992 1 NC_010407.1 urea carboxylase 2508992 6157974 CMS_2364 Clavibacter michiganensis subsp. sepedonicus urea carboxylase YP_001711029.1 2505363 D 31964 CDS YP_001711030.1 170782696 6157975 2509054..2510835 1 NC_010407.1 catalyzes the hydrolysis of allophanate; allophanate hydrolase 2510835 6157975 CMS_2365 Clavibacter michiganensis subsp. sepedonicus allophanate hydrolase YP_001711030.1 2509054 D 31964 CDS YP_001711031.1 170782697 6157976 2510841..2511320 1 NC_010407.1 ATP-binding protein 2511320 6157976 CMS_2366 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001711031.1 2510841 D 31964 CDS YP_001711032.1 170782698 6157977 complement(2511328..2512173) 1 NC_010407.1 sulfurtransferase 2512173 6157977 CMS_2367 Clavibacter michiganensis subsp. sepedonicus sulfurtransferase YP_001711032.1 2511328 R 31964 CDS YP_001711033.1 170782699 6157978 complement(2512202..2512687) 1 NC_010407.1 acetyltransferase 2512687 6157978 CMS_2368 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001711033.1 2512202 R 31964 CDS YP_001711034.1 170782700 6157979 complement(2512869..2513864) 1 NC_010407.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 2513864 nrdF 6157979 nrdF Clavibacter michiganensis subsp. sepedonicus ribonucleotide-diphosphate reductase subunit beta YP_001711034.1 2512869 R 31964 CDS YP_001711035.1 170782701 6158842 complement(2514029..2516533) 1 NC_010407.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2516533 nrdA 6158842 nrdA Clavibacter michiganensis subsp. sepedonicus ribonucleotide-diphosphate reductase subunit alpha YP_001711035.1 2514029 R 31964 CDS YP_001711036.1 170782702 6158841 2517412..2518623 1 NC_010407.1 transport protein 2518623 6158841 CMS_2373 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711036.1 2517412 D 31964 CDS YP_001711037.1 170782703 6157980 2518722..2519201 1 NC_010407.1 hypothetical protein 2519201 6157980 CMS_2374 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711037.1 2518722 D 31964 CDS YP_001711038.1 170782704 6157981 complement(2519270..2520262) 1 NC_010407.1 oxidoreductase 2520262 6157981 CMS_2375 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001711038.1 2519270 R 31964 CDS YP_001711039.1 170782705 6157982 complement(2520272..2520562) 1 NC_010407.1 hypothetical protein 2520562 6157982 CMS_2376 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711039.1 2520272 R 31964 CDS YP_001711040.1 170782706 6157983 2521421..2522599 1 NC_010407.1 protease 2522599 6157983 CMS_2377 Clavibacter michiganensis subsp. sepedonicus protease YP_001711040.1 2521421 D 31964 CDS YP_001711041.1 170782707 6157984 complement(2522672..2523964) 1 NC_010407.1 N/R; insertion element ISCmi3 transposase 2523964 6157984 CMS_2378 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi3 transposase YP_001711041.1 2522672 R 31964 CDS YP_001711042.1 170782708 6157985 complement(2524314..2524964) 1 NC_010407.1 GntR family transcriptional regulator 2524964 6157985 CMS_2380 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001711042.1 2524314 R 31964 CDS YP_001711043.1 170782709 6157986 complement(2525055..2525834) 1 NC_010407.1 triosephosphate isomerase 2525834 tpiA 6157986 tpiA Clavibacter michiganensis subsp. sepedonicus triosephosphate isomerase YP_001711043.1 2525055 R 31964 CDS YP_001711044.1 170782710 6159021 complement(2525857..2526318) 1 NC_010407.1 sugar-phosphate isomerase 2526318 6159021 CMS_2382 Clavibacter michiganensis subsp. sepedonicus sugar-phosphate isomerase YP_001711044.1 2525857 R 31964 CDS YP_001711045.1 170782711 6157987 complement(2526369..2528018) 1 NC_010407.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 2528018 6157987 CMS_2383 Clavibacter michiganensis subsp. sepedonicus dihydroxyacetone kinase YP_001711045.1 2526369 R 31964 CDS YP_001711046.1 170782712 6157988 complement(2528424..2529185) 1 NC_010407.1 GntR family transcriptional regulator 2529185 6157988 CMS_2385 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001711046.1 2528424 R 31964 CDS YP_001711047.1 170782713 6157989 complement(2529239..2530162) 1 NC_010407.1 ABC transporter ATP-binding protein 2530162 6157989 CMS_2386 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711047.1 2529239 R 31964 CDS YP_001711048.1 170782714 6157990 complement(2530159..2531202) 1 NC_010407.1 ABC transporter permease 2531202 6157990 CMS_2387 Clavibacter michiganensis subsp. sepedonicus ABC transporter permease YP_001711048.1 2530159 R 31964 CDS YP_001711049.1 170782715 6157991 complement(2531304..2532266) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2532266 6157991 CMS_2388 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711049.1 2531304 R 31964 CDS YP_001711050.1 170782716 6157992 complement(2532364..2533974) 1 NC_010407.1 surface polysaccharide transport protein 2533974 6157992 CMS_2389 Clavibacter michiganensis subsp. sepedonicus surface polysaccharide transport protein YP_001711050.1 2532364 R 31964 CDS YP_001711051.1 170782717 6157993 complement(2534237..2535286) 1 NC_010407.1 glycosyl transferase 2535286 kanE 6157993 kanE Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001711051.1 2534237 R 31964 CDS YP_001711052.1 170782718 6158777 2535445..2537388 1 NC_010407.1 glycosyl transferase family protein 2537388 6158777 CMS_2391 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase family protein YP_001711052.1 2535445 D 31964 CDS YP_001711053.1 170782719 6157994 2537603..2538265 1 NC_010407.1 hypothetical protein 2538265 6157994 CMS_2392 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711053.1 2537603 D 31964 CDS YP_001711054.1 170782720 6157995 complement(2538390..2539616) 1 NC_010407.1 ATP-binding protein 2539616 6157995 CMS_2393 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001711054.1 2538390 R 31964 CDS YP_001711055.1 170782721 6157996 2539813..2540316 1 NC_010407.1 DNA-binding membrane protein 2540316 6157996 CMS_2394 Clavibacter michiganensis subsp. sepedonicus DNA-binding membrane protein YP_001711055.1 2539813 D 31964 CDS YP_001711056.1 170782722 6157997 2540415..2540954 1 NC_010407.1 adenine phosphoribosyltransferase 2540954 apt 6157997 apt Clavibacter michiganensis subsp. sepedonicus adenine phosphoribosyltransferase YP_001711056.1 2540415 D 31964 CDS YP_001711057.1 170782723 6158598 2541026..2541676 1 NC_010407.1 MerR family transcriptional regulator 2541676 6158598 CMS_2396 Clavibacter michiganensis subsp. sepedonicus MerR family transcriptional regulator YP_001711057.1 2541026 D 31964 CDS YP_001711058.1 170782724 6157998 2541673..2542419 1 NC_010407.1 hypothetical protein 2542419 6157998 CMS_2397 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711058.1 2541673 D 31964 CDS YP_001711059.1 170782725 6157999 2542416..2542682 1 NC_010407.1 hypothetical protein 2542682 6157999 CMS_2398 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711059.1 2542416 D 31964 CDS YP_001711060.1 170782726 6158000 complement(2542672..2544036) 1 NC_010407.1 surface polysaccharide biosynthesis protein 2544036 6158000 CMS_2399 Clavibacter michiganensis subsp. sepedonicus surface polysaccharide biosynthesis protein YP_001711060.1 2542672 R 31964 CDS YP_001711061.1 170782727 6158001 complement(2544033..2545403) 1 NC_010407.1 hypothetical protein 2545403 6158001 CMS_2400 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711061.1 2544033 R 31964 CDS YP_001711062.1 170782728 6158002 complement(2545575..2546537) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2546537 6158002 CMS_2401 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711062.1 2545575 R 31964 CDS YP_001711063.1 170782729 6158004 2547403..2548809 1 NC_010407.1 amino acid permease 2548809 6158004 CMS_2403 Clavibacter michiganensis subsp. sepedonicus amino acid permease YP_001711063.1 2547403 D 31964 CDS YP_001711064.1 170782730 6158005 2548854..2549546 1 NC_010407.1 phosphatase 2549546 6158005 CMS_2404 Clavibacter michiganensis subsp. sepedonicus phosphatase YP_001711064.1 2548854 D 31964 CDS YP_001711065.1 170782731 6158006 2549612..2550127 1 NC_010407.1 hypothetical protein 2550127 6158006 CMS_2405 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711065.1 2549612 D 31964 CDS YP_001711066.1 170782732 6158007 2550124..2550894 1 NC_010407.1 hypothetical protein 2550894 6158007 CMS_2406 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711066.1 2550124 D 31964 CDS YP_001711067.1 170782733 6158009 2551352..2552689 1 NC_010407.1 ATP-binding protein 2552689 6158009 CMS_2408 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001711067.1 2551352 D 31964 CDS YP_001711068.1 170782734 6158010 2552682..2553485 1 NC_010407.1 hypothetical protein 2553485 6158010 CMS_2409 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711068.1 2552682 D 31964 CDS YP_001711069.1 170782735 6158011 complement(2553585..2554658) 1 NC_010407.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2554658 6158011 CMS_2410 Clavibacter michiganensis subsp. sepedonicus GTP-dependent nucleic acid-binding protein EngD YP_001711069.1 2553585 R 31964 CDS YP_001711070.1 170782736 6158012 2554738..2555388 1 NC_010407.1 exonuclease 2555388 6158012 CMS_2411 Clavibacter michiganensis subsp. sepedonicus exonuclease YP_001711070.1 2554738 D 31964 CDS YP_001711071.1 170782737 6158013 2555477..2556856 1 NC_010407.1 DNA recombination protein 2556856 rmuC 6158013 rmuC Clavibacter michiganensis subsp. sepedonicus DNA recombination protein YP_001711071.1 2555477 D 31964 CDS YP_001711072.1 170782738 6158939 2556962..2557987 1 NC_010407.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 2557987 fba 6158939 fba Clavibacter michiganensis subsp. sepedonicus fructose-bisphosphate aldolase YP_001711072.1 2556962 D 31964 CDS YP_001711073.1 170782739 6158685 complement(2558065..2558916) 1 NC_010407.1 hypothetical protein 2558916 6158685 CMS_2414 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711073.1 2558065 R 31964 CDS YP_001711074.1 170782740 6158014 complement(2558913..2559974) 1 NC_010407.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2559974 ispH 6158014 ispH Clavibacter michiganensis subsp. sepedonicus 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001711074.1 2558913 R 31964 CDS YP_001711075.1 170782741 6158776 2560050..2561366 1 NC_010407.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 2561366 xseA 6158776 xseA Clavibacter michiganensis subsp. sepedonicus exodeoxyribonuclease VII large subunit YP_001711075.1 2560050 D 31964 CDS YP_001711076.1 170782742 6159100 2561377..2561619 1 NC_010407.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 2561619 xseB 6159100 xseB Clavibacter michiganensis subsp. sepedonicus exodeoxyribonuclease VII small subunit YP_001711076.1 2561377 D 31964 CDS YP_001711077.1 170782743 6159101 2561622..2562335 1 NC_010407.1 hypothetical protein 2562335 6159101 CMS_2418 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711077.1 2561622 D 31964 CDS YP_001711078.1 170782744 6158015 2562332..2562994 1 NC_010407.1 carbonic anhydrase 2562994 6158015 CMS_2419 Clavibacter michiganensis subsp. sepedonicus carbonic anhydrase YP_001711078.1 2562332 D 31964 CDS YP_001711079.1 170782745 6158016 2563079..2564506 1 NC_010407.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2564506 fumC 6158016 fumC Clavibacter michiganensis subsp. sepedonicus fumarate hydratase YP_001711079.1 2563079 D 31964 CDS YP_001711080.1 170782746 6158703 complement(2564865..2566232) 1 NC_010407.1 ATP-binding protein 2566232 6158703 CMS_2422 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001711080.1 2564865 R 31964 CDS YP_001711081.1 170782747 6158017 complement(2566436..2567221) 1 NC_010407.1 undecaprenyl pyrophosphate synthetase 2567221 uppS 6158017 uppS Clavibacter michiganensis subsp. sepedonicus undecaprenyl pyrophosphate synthetase YP_001711081.1 2566436 R 31964 CDS YP_001711082.1 170782748 6159088 2567303..2568058 1 NC_010407.1 hypothetical protein 2568058 6159088 CMS_2424 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711082.1 2567303 D 31964 CDS YP_001711083.1 170782749 6158018 complement(2568082..2569398) 1 NC_010407.1 substrate-binding transport protein 2569398 6158018 CMS_2425 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001711083.1 2568082 R 31964 CDS YP_001711084.1 170782750 6158019 complement(2569531..2570361) 1 NC_010407.1 transport protein 2570361 6158019 CMS_2426 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711084.1 2569531 R 31964 CDS YP_001711085.1 170782751 6158020 complement(2570442..2571431) 1 NC_010407.1 transport protein 2571431 6158020 CMS_2427 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711085.1 2570442 R 31964 CDS YP_001711086.1 170782752 6158021 complement(2571849..2572199) 1 NC_010407.1 hypothetical protein 2572199 6158021 CMS_2429 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711086.1 2571849 R 31964 CDS YP_001711087.1 170782753 6158022 complement(2572196..2573122) 1 NC_010407.1 hypothetical protein 2573122 6158022 CMS_2430 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711087.1 2572196 R 31964 CDS YP_001711088.1 170782754 6158023 2573144..2573626 1 NC_010407.1 hypothetical protein 2573626 6158023 CMS_2431 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711088.1 2573144 D 31964 CDS YP_001711089.1 170782755 6158024 2573687..2574175 1 NC_010407.1 transcription elongation factor 2574175 6158024 CMS_2432 Clavibacter michiganensis subsp. sepedonicus transcription elongation factor YP_001711089.1 2573687 D 31964 CDS YP_001711090.1 170782756 6158025 complement(2574260..2575636) 1 NC_010407.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 2575636 6158025 CMS_2433 Clavibacter michiganensis subsp. sepedonicus threonine dehydratase YP_001711090.1 2574260 R 31964 CDS YP_001711091.1 170782757 6158026 complement(2575633..2576868) 1 NC_010407.1 hypothetical protein 2576868 6158026 CMS_2434 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711091.1 2575633 R 31964 CDS YP_001711092.1 170782758 6158027 2576991..2578205 1 NC_010407.1 hypothetical protein 2578205 6158027 CMS_2435 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711092.1 2576991 D 31964 CDS YP_001711093.1 170782759 6158028 2578202..2578657 1 NC_010407.1 hypothetical protein 2578657 6158028 CMS_2436 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711093.1 2578202 D 31964 CDS YP_001711094.1 170782760 6158029 complement(2578668..2579234) 1 NC_010407.1 hypothetical protein 2579234 6158029 CMS_2437 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711094.1 2578668 R 31964 CDS YP_001711095.1 170782761 6158030 complement(2579342..2580712) 1 NC_010407.1 glycoside hydrolase 2580712 6158030 CMS_2438 Clavibacter michiganensis subsp. sepedonicus glycoside hydrolase YP_001711095.1 2579342 R 31964 CDS YP_001711096.1 170782762 6158031 2580853..2583144 1 NC_010407.1 hypothetical protein 2583144 6158031 CMS_2439 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711096.1 2580853 D 31964 CDS YP_001711097.1 170782763 6158032 2583277..2584719 1 NC_010407.1 amino acid transport protein 2584719 6158032 CMS_2440 Clavibacter michiganensis subsp. sepedonicus amino acid transport protein YP_001711097.1 2583277 D 31964 CDS YP_001711098.1 170782764 6158033 complement(2584812..2585753) 1 NC_010407.1 hypothetical protein 2585753 6158033 CMS_2441 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711098.1 2584812 R 31964 CDS YP_001711099.1 170782765 6158034 complement(2585939..2588572) 1 NC_010407.1 Multi-domain protein with no full length matches; hypothetical protein 2588572 6158034 CMS_2442 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711099.1 2585939 R 31964 CDS YP_001711100.1 170782766 6158035 complement(2588572..2589006) 1 NC_010407.1 anti-sigma factor 2589006 6158035 CMS_2443 Clavibacter michiganensis subsp. sepedonicus anti-sigma factor YP_001711100.1 2588572 R 31964 CDS YP_001711101.1 170782767 6158036 complement(2589011..2589349) 1 NC_010407.1 anti-sigma factor antagonist 2589349 6158036 CMS_2444 Clavibacter michiganensis subsp. sepedonicus anti-sigma factor antagonist YP_001711101.1 2589011 R 31964 CDS YP_001711102.1 170782768 6158037 complement(2589346..2591337) 1 NC_010407.1 polysaccharide synthase 2591337 6158037 CMS_2445 Clavibacter michiganensis subsp. sepedonicus polysaccharide synthase YP_001711102.1 2589346 R 31964 CDS YP_001711103.1 170782769 6158038 complement(2591334..2592569) 1 NC_010407.1 hypothetical protein 2592569 6158038 CMS_2446 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711103.1 2591334 R 31964 CDS YP_001711104.1 170782770 6158039 2592776..2593861 1 NC_010407.1 acetyl transferase 2593861 6158039 CMS_2447 Clavibacter michiganensis subsp. sepedonicus acetyl transferase YP_001711104.1 2592776 D 31964 CDS YP_001711105.1 170782771 6158040 complement(2594277..2594588) 1 NC_010407.1 hypothetical protein 2594588 6158040 CMS_2448 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711105.1 2594277 R 31964 CDS YP_001711106.1 170782772 6158041 2594787..2595050 1 NC_010407.1 hypothetical protein 2595050 6158041 CMS_2449 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711106.1 2594787 D 31964 CDS YP_001711107.1 170782773 6158042 complement(2595032..2595457) 1 NC_010407.1 hypothetical protein 2595457 6158042 CMS_2450 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711107.1 2595032 R 31964 CDS YP_001711108.1 170782774 6158043 complement(2595454..2595939) 1 NC_010407.1 prophage protein 2595939 6158043 CMS_2451 Clavibacter michiganensis subsp. sepedonicus prophage protein YP_001711108.1 2595454 R 31964 CDS YP_001711109.1 170782775 6159049 complement(2596498..2597985) 1 NC_010407.1 dehydrogenase 2597985 6159049 CMS_2452 Clavibacter michiganensis subsp. sepedonicus dehydrogenase YP_001711109.1 2596498 R 31964 CDS YP_001711110.1 170782776 6158045 complement(2598023..2599258) 1 NC_010407.1 sortase-sorted serine protease 2599258 6158045 CMS_2453 Clavibacter michiganensis subsp. sepedonicus sortase-sorted serine protease YP_001711110.1 2598023 R 31964 CDS YP_001711111.1 170782777 6158046 complement(2599333..2599848) 1 NC_010407.1 hypothetical protein 2599848 6158046 CMS_2454 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711111.1 2599333 R 31964 CDS YP_001711112.1 170782778 6158047 complement(2599845..2600402) 1 NC_010407.1 hypothetical protein 2600402 6158047 CMS_2455 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711112.1 2599845 R 31964 CDS YP_001711113.1 170782779 6158048 complement(2600492..2601772) 1 NC_010407.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2601772 eno 6158048 eno Clavibacter michiganensis subsp. sepedonicus phosphopyruvate hydratase YP_001711113.1 2600492 R 31964 CDS YP_001711114.1 170782780 6158676 complement(2601889..2603196) 1 NC_010407.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2603196 hisS 6158676 hisS Clavibacter michiganensis subsp. sepedonicus histidyl-tRNA synthetase YP_001711114.1 2601889 R 31964 CDS YP_001711115.1 170782781 6158757 complement(2603209..2603844) 1 NC_010407.1 hypothetical protein 2603844 6158757 CMS_2458 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711115.1 2603209 R 31964 CDS YP_001711116.1 170782782 6158049 complement(2603999..2604706) 1 NC_010407.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 2604706 6158049 CMS_2459 Clavibacter michiganensis subsp. sepedonicus nucleoside triphosphate pyrophosphohydrolase YP_001711116.1 2603999 R 31964 CDS YP_001711117.1 170782783 6158050 2604841..2606136 1 NC_010407.1 sodium/proton antiporter 2606136 6158050 CMS_2460 Clavibacter michiganensis subsp. sepedonicus sodium/proton antiporter YP_001711117.1 2604841 D 31964 CDS YP_001711118.1 170782784 6158051 2606302..2607402 1 NC_010407.1 Unusually low GC content; hypothetical protein 2607402 6158051 CMS_2461 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711118.1 2606302 D 31964 CDS YP_001711119.1 170782785 6158052 complement(2607444..2611076) 1 NC_010407.1 transcription-repair coupling factor 2611076 mfd 6158052 mfd Clavibacter michiganensis subsp. sepedonicus transcription-repair coupling factor YP_001711119.1 2607444 R 31964 CDS YP_001711120.1 170782786 6158813 complement(2611163..2611750) 1 NC_010407.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2611750 pth 6158813 pth Clavibacter michiganensis subsp. sepedonicus peptidyl-tRNA hydrolase YP_001711120.1 2611163 R 31964 CDS YP_001711121.1 170782787 6158887 complement(2611903..2612547) 1 NC_010407.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 2612547 rplY 6158887 rplY Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L25 YP_001711121.1 2611903 R 31964 CDS YP_001711122.1 170782788 6158953 complement(2612718..2614739) 1 NC_010407.1 multifunctional enzyme 2614739 6158953 CMS_2465 Clavibacter michiganensis subsp. sepedonicus multifunctional enzyme YP_001711122.1 2612718 R 31964 CDS YP_001711123.1 170782789 6158053 2614823..2616277 1 NC_010407.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 2616277 gnd 6158053 gnd Clavibacter michiganensis subsp. sepedonicus 6-phosphogluconate dehydrogenase YP_001711123.1 2614823 D 31964 CDS YP_001711124.1 170782790 6158732 2616348..2616722 1 NC_010407.1 hypothetical protein 2616722 6158732 CMS_2467 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711124.1 2616348 D 31964 CDS YP_001711125.1 170782791 6158054 2617089..2618171 1 NC_010407.1 hypothetical protein 2618171 6158054 CMS_2468 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711125.1 2617089 D 31964 CDS YP_001711126.1 170782792 6158055 complement(2618267..2619244) 1 NC_010407.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2619244 prs 6158055 prs Clavibacter michiganensis subsp. sepedonicus ribose-phosphate pyrophosphokinase YP_001711126.1 2618267 R 31964 CDS YP_001711127.1 170782793 6158886 complement(2619278..2620759) 1 NC_010407.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 2620759 glmU 6158886 glmU Clavibacter michiganensis subsp. sepedonicus bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001711127.1 2619278 R 31964 CDS YP_001711128.1 170782794 6159037 complement(2620983..2622374) 1 NC_010407.1 hypothetical protein 2622374 6159037 CMS_2471 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711128.1 2620983 R 31964 CDS YP_001711129.1 170782795 6158056 2622552..2623055 1 NC_010407.1 MarR family transcriptional regulator 2623055 6158056 CMS_2472 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711129.1 2622552 D 31964 CDS YP_001711130.1 170782796 6158057 complement(2623104..2623460) 1 NC_010407.1 hypothetical protein 2623460 6158057 CMS_2473 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711130.1 2623104 R 31964 CDS YP_001711131.1 170782797 6158058 complement(2623468..2624487) 1 NC_010407.1 hypothetical protein 2624487 6158058 CMS_2474 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711131.1 2623468 R 31964 CDS YP_001711132.1 170782798 6158059 complement(2624484..2625302) 1 NC_010407.1 amino acid export protein 2625302 6158059 CMS_2475 Clavibacter michiganensis subsp. sepedonicus amino acid export protein YP_001711132.1 2624484 R 31964 CDS YP_001711133.1 170782799 6158061 complement(2626293..2626952) 1 NC_010407.1 amino acid transport protein 2626952 6158061 CMS_2477 Clavibacter michiganensis subsp. sepedonicus amino acid transport protein YP_001711133.1 2626293 R 31964 CDS YP_001711134.1 170782800 6158062 complement(2626954..2627991) 1 NC_010407.1 ABC transporter ATP-binding protein 2627991 6158062 CMS_2478 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711134.1 2626954 R 31964 CDS YP_001711135.1 170782801 6158063 complement(2627988..2628920) 1 NC_010407.1 lipoprotein 2628920 6158063 CMS_2479 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711135.1 2627988 R 31964 CDS YP_001711136.1 170782802 6158064 2629238..2630167 1 NC_010407.1 hypothetical protein 2630167 6158064 CMS_2480 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711136.1 2629238 D 31964 CDS YP_001711137.1 170782803 6158065 2630226..2631074 1 NC_010407.1 hypothetical protein 2631074 6158065 CMS_2481 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711137.1 2630226 D 31964 CDS YP_001711138.1 170782804 6158066 complement(2631109..2632884) 1 NC_010407.1 ABC transporter ATP-binding protein 2632884 6158066 CMS_2482 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711138.1 2631109 R 31964 CDS YP_001711139.1 170782805 6158067 2633085..2634377 1 NC_010407.1 drug efflux protein 2634377 6158067 CMS_2483 Clavibacter michiganensis subsp. sepedonicus drug efflux protein YP_001711139.1 2633085 D 31964 CDS YP_001711140.1 170782806 6158068 2634530..2634700 1 NC_010407.1 hypothetical protein 2634700 6158068 CMS_2483A Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711140.1 2634530 D 31964 CDS YP_001711141.1 170782807 6158069 complement(2634697..2635377) 1 NC_010407.1 ABC transporter ATP-binding protein 2635377 6158069 CMS_2484 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711141.1 2634697 R 31964 CDS YP_001711142.1 170782808 6158070 complement(2635377..2637650) 1 NC_010407.1 hypothetical protein 2637650 6158070 CMS_2485 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711142.1 2635377 R 31964 CDS YP_001711143.1 170782809 6158071 complement(2637682..2638002) 1 NC_010407.1 hypothetical protein 2638002 6158071 CMS_2486 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711143.1 2637682 R 31964 CDS YP_001711144.1 170782810 6158072 complement(2638125..2638541) 1 NC_010407.1 molybdopterin converting factor subunit 2638541 moaE 6158072 moaE Clavibacter michiganensis subsp. sepedonicus molybdopterin converting factor subunit YP_001711144.1 2638125 R 31964 CDS YP_001711145.1 170782811 6158818 complement(2638553..2639107) 1 NC_010407.1 molybdopterin biosynthesis protein Mog 2639107 mog 6158818 mog Clavibacter michiganensis subsp. sepedonicus molybdopterin biosynthesis protein Mog YP_001711145.1 2638553 R 31964 CDS YP_001711146.1 170782812 6158820 complement(2639104..2639646) 1 NC_010407.1 molybdenum cofactor biosynthesis protein C 2639646 moaC 6158820 moaC Clavibacter michiganensis subsp. sepedonicus molybdenum cofactor biosynthesis protein C YP_001711146.1 2639104 R 31964 CDS YP_001711147.1 170782813 6158817 complement(2639639..2640931) 1 NC_010407.1 molybdopterin biosynthesis protein MoeA 2640931 moeA 6158817 moeA Clavibacter michiganensis subsp. sepedonicus molybdopterin biosynthesis protein MoeA YP_001711147.1 2639639 R 31964 CDS YP_001711148.1 170782814 6158819 2641059..2641274 1 NC_010407.1 hypothetical protein 2641274 6158819 CMS_2491 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711148.1 2641059 D 31964 CDS YP_001711149.1 170782815 6158073 2641329..2642075 1 NC_010407.1 hypothetical protein 2642075 6158073 CMS_2492 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711149.1 2641329 D 31964 CDS YP_001711150.1 170782816 6158074 2642157..2642930 1 NC_010407.1 transferase 2642930 6158074 CMS_2493 Clavibacter michiganensis subsp. sepedonicus transferase YP_001711150.1 2642157 D 31964 CDS YP_001711151.1 170782817 6158075 complement(2642965..2644092) 1 NC_010407.1 bile acid:sodium symporter 2644092 6158075 CMS_2494 Clavibacter michiganensis subsp. sepedonicus bile acid:sodium symporter YP_001711151.1 2642965 R 31964 CDS YP_001711152.1 170782818 6158076 complement(2644086..2645210) 1 NC_010407.1 hypothetical protein 2645210 6158076 CMS_2495 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711152.1 2644086 R 31964 CDS YP_001711153.1 170782819 6158077 2645254..2646297 1 NC_010407.1 purine phosphorylase 2646297 6158077 CMS_2496 Clavibacter michiganensis subsp. sepedonicus purine phosphorylase YP_001711153.1 2645254 D 31964 CDS YP_001711154.1 170782820 6158078 2646294..2647358 1 NC_010407.1 epimerase/dehydratase 2647358 6158078 CMS_2497 Clavibacter michiganensis subsp. sepedonicus epimerase/dehydratase YP_001711154.1 2646294 D 31964 CDS YP_001711155.1 170782821 6158079 2647509..2647958 1 NC_010407.1 lipoprotein 2647958 6158079 CMS_2498 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711155.1 2647509 D 31964 CDS YP_001711156.1 170782822 6158080 complement(2648017..2648874) 1 NC_010407.1 levodione reductase 2648874 lvr 6158080 lvr Clavibacter michiganensis subsp. sepedonicus levodione reductase YP_001711156.1 2648017 R 31964 CDS YP_001711157.1 170782823 6158798 complement(2648883..2649896) 1 NC_010407.1 hypothetical protein 2649896 6158798 CMS_2500 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711157.1 2648883 R 31964 CDS YP_001711158.1 170782824 6158081 complement(2650002..2650469) 1 NC_010407.1 hypothetical protein 2650469 6158081 CMS_2501 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711158.1 2650002 R 31964 CDS YP_001711159.1 170782825 6158082 complement(2650539..2650721) 1 NC_010407.1 hypothetical protein 2650721 6158082 CMS_2502 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711159.1 2650539 R 31964 CDS YP_001711160.1 170782826 6158083 2650852..2651943 1 NC_010407.1 hypothetical protein 2651943 6158083 CMS_2503 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711160.1 2650852 D 31964 CDS YP_001711161.1 170782827 6158084 2651940..2653031 1 NC_010407.1 hypothetical protein 2653031 6158084 CMS_2504 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711161.1 2651940 D 31964 CDS YP_001711162.1 170782828 6158085 2653497..2654390 1 NC_010407.1 hypothetical protein 2654390 6158085 CMS_2505 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711162.1 2653497 D 31964 CDS YP_001711163.1 170782829 6158086 2654497..2655255 1 NC_010407.1 hypothetical protein 2655255 6158086 CMS_2506 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711163.1 2654497 D 31964 CDS YP_001711164.1 170782830 6158087 2655263..2656654 1 NC_010407.1 hypothetical protein 2656654 6158087 CMS_2507 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711164.1 2655263 D 31964 CDS YP_001711165.1 170782831 6158088 2656889..2658094 1 NC_010407.1 monooxygenase 2658094 6158088 CMS_2508 Clavibacter michiganensis subsp. sepedonicus monooxygenase YP_001711165.1 2656889 D 31964 CDS YP_001711166.1 170782832 6158089 complement(2658174..2658344) 1 NC_010407.1 hypothetical protein 2658344 6158089 CMS_2509A Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711166.1 2658174 R 31964 CDS YP_001711167.1 170782833 6158091 2658483..2658821 1 NC_010407.1 hypothetical protein 2658821 6158091 CMS_2509 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711167.1 2658483 D 31964 CDS YP_001711168.1 170782834 6158090 complement(2658947..2659633) 1 NC_010407.1 lipoprotein 2659633 6158090 CMS_2510 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711168.1 2658947 R 31964 CDS YP_001711169.1 170782835 6158092 2659899..2660582 1 NC_010407.1 PadR family transcriptional regulator 2660582 6158092 CMS_2511 Clavibacter michiganensis subsp. sepedonicus PadR family transcriptional regulator YP_001711169.1 2659899 D 31964 CDS YP_001711170.1 170782836 6158093 complement(2660674..2660973) 1 NC_010407.1 hypothetical protein 2660973 6158093 CMS_2512 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711170.1 2660674 R 31964 CDS YP_001711171.1 170782837 6158095 complement(2662659..2663921) 1 NC_010407.1 two-component system sensor kinase 2663921 6158095 CMS_2514 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001711171.1 2662659 R 31964 CDS YP_001711172.1 170782838 6158096 complement(2663918..2664676) 1 NC_010407.1 two-component system response regulator 2664676 6158096 CMS_2515 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001711172.1 2663918 R 31964 CDS YP_001711173.1 170782839 6158097 2664920..2665627 1 NC_010407.1 glycosyl transferase 2665627 6158097 CMS_2516 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001711173.1 2664920 D 31964 CDS YP_001711174.1 170782840 6158098 2665624..2666307 1 NC_010407.1 hypothetical protein 2666307 6158098 CMS_2517 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711174.1 2665624 D 31964 CDS YP_001711175.1 170782841 6158099 2666304..2666999 1 NC_010407.1 hypothetical protein 2666999 6158099 CMS_2518 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711175.1 2666304 D 31964 CDS YP_001711176.1 170782842 6158100 complement(2666948..2667451) 1 NC_010407.1 hypothetical protein 2667451 6158100 CMS_2519 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711176.1 2666948 R 31964 CDS YP_001711177.1 170782843 6158101 complement(2667448..2668686) 1 NC_010407.1 hypothetical protein 2668686 6158101 CMS_2520 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711177.1 2667448 R 31964 CDS YP_001711178.1 170782844 6158102 2668765..2670213 1 NC_010407.1 hypothetical protein 2670213 6158102 CMS_2521 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711178.1 2668765 D 31964 CDS YP_001711179.1 170782845 6158103 complement(2670214..2671305) 1 NC_010407.1 ABC transporter ATP-binding subunit 2671305 6158103 CMS_2522 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001711179.1 2670214 R 31964 CDS YP_001711180.1 170782846 6158104 complement(2671302..2672081) 1 NC_010407.1 transport protein 2672081 6158104 CMS_2523 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711180.1 2671302 R 31964 CDS YP_001711181.1 170782847 6158105 complement(2672155..2672943) 1 NC_010407.1 substrate-binding transport protein 2672943 6158105 CMS_2524 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001711181.1 2672155 R 31964 CDS YP_001711182.1 170782848 6158106 complement(2672943..2673455) 1 NC_010407.1 substrate binding transport regulator 2673455 6158106 CMS_2525 Clavibacter michiganensis subsp. sepedonicus substrate binding transport regulator YP_001711182.1 2672943 R 31964 CDS YP_001711183.1 170782849 6158107 2673549..2674634 1 NC_010407.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2674634 moaA 6158107 moaA Clavibacter michiganensis subsp. sepedonicus molybdenum cofactor biosynthesis protein A YP_001711183.1 2673549 D 31964 CDS YP_001711184.1 170782850 6158816 2674636..2674899 1 NC_010407.1 molybdopterin converting factor 2674899 6158816 CMS_2527 Clavibacter michiganensis subsp. sepedonicus molybdopterin converting factor YP_001711184.1 2674636 D 31964 CDS YP_001711185.1 170782851 6158108 2675177..2676751 1 NC_010407.1 lambdoid prophage protein 2676751 6158108 CMS_2528 Clavibacter michiganensis subsp. sepedonicus lambdoid prophage protein YP_001711185.1 2675177 D 31964 CDS YP_001711186.1 170782852 6158109 2676751..2677572 1 NC_010407.1 lambdoid prophage protein 2677572 6158109 CMS_2529 Clavibacter michiganensis subsp. sepedonicus lambdoid prophage protein YP_001711186.1 2676751 D 31964 CDS YP_001711187.1 170782853 6158110 complement(2678120..2678599) 1 NC_010407.1 hypothetical protein 2678599 6158110 CMS_2530 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711187.1 2678120 R 31964 CDS YP_001711188.1 170782854 6158111 complement(2678709..2679674) 1 NC_010407.1 hypothetical protein 2679674 6158111 CMS_2531 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711188.1 2678709 R 31964 CDS YP_001711189.1 170782855 6158112 complement(2679671..2680021) 1 NC_010407.1 GntR family transcriptional regulator 2680021 6158112 CMS_2532 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001711189.1 2679671 R 31964 CDS YP_001711190.1 170782856 6158113 complement(2680069..2680980) 1 NC_010407.1 LacI family transcriptional regulator 2680980 6158113 CMS_2533 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001711190.1 2680069 R 31964 CDS YP_001711191.1 170782857 6158114 complement(2681079..2683112) 1 NC_010407.1 oxidoreductase 2683112 6158114 CMS_2534 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001711191.1 2681079 R 31964 CDS YP_001711192.1 170782858 6158115 2683226..2684335 1 NC_010407.1 GC Frameplot suggests recent fusion of 2 CDSs; hypothetical protein 2684335 6158115 CMS_2535 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711192.1 2683226 D 31964 CDS YP_001711193.1 170782859 6158116 complement(2684388..2684999) 1 NC_010407.1 hypothetical protein 2684999 6158116 CMS_2536 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711193.1 2684388 R 31964 CDS YP_001711194.1 170782860 6158117 2685171..2686442 1 NC_010407.1 hypothetical protein 2686442 6158117 CMS_2537 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711194.1 2685171 D 31964 CDS YP_001711195.1 170782861 6158118 complement(2686468..2687655) 1 NC_010407.1 sulfurylase 2687655 6158118 CMS_2538 Clavibacter michiganensis subsp. sepedonicus sulfurylase YP_001711195.1 2686468 R 31964 CDS YP_001711196.1 170782862 6158119 2687654..2689360 1 NC_010407.1 hypothetical protein 2689360 6158119 CMS_2539 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711196.1 2687654 D 31964 CDS YP_001711197.1 170782863 6158120 complement(2689379..2690293) 1 NC_010407.1 hydrolase 2690293 6158120 CMS_2540 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001711197.1 2689379 R 31964 CDS YP_001711198.1 170782864 6158121 2690326..2690829 1 NC_010407.1 hypothetical protein 2690829 6158121 CMS_2541 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711198.1 2690326 D 31964 CDS YP_001711199.1 170782865 6158122 2690883..2691302 1 NC_010407.1 hypothetical protein 2691302 6158122 CMS_2542 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711199.1 2690883 D 31964 CDS YP_001711200.1 170782866 6158123 2691399..2692361 1 NC_010407.1 N/R/C; insertion element ISCmi2 transposase 2692361 6158123 CMS_2543 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001711200.1 2691399 D 31964 CDS YP_001711201.1 170782867 6158124 complement(2692358..2692825) 1 NC_010407.1 MarR family transcriptional regulator 2692825 6158124 CMS_2544 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711201.1 2692358 R 31964 CDS YP_001711202.1 170782868 6158125 complement(2693135..2693743) 1 NC_010407.1 transcriptional regulator 2693743 6158125 CMS_2545 Clavibacter michiganensis subsp. sepedonicus transcriptional regulator YP_001711202.1 2693135 R 31964 CDS YP_001711203.1 170782869 6158126 complement(2694305..2694952) 1 NC_010407.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 2694952 upp 6158126 upp Clavibacter michiganensis subsp. sepedonicus uracil phosphoribosyltransferase YP_001711203.1 2694305 R 31964 CDS YP_001711204.1 170782870 6159086 2694976..2695452 1 NC_010407.1 tRNA-specific adenosine deaminase 2695452 tadA 6159086 tadA Clavibacter michiganensis subsp. sepedonicus tRNA-specific adenosine deaminase YP_001711204.1 2694976 D 31964 CDS YP_001711205.1 170782871 6159004 complement(2695941..2696933) 1 NC_010407.1 cation transport protein 2696933 6159004 CMS_2549 Clavibacter michiganensis subsp. sepedonicus cation transport protein YP_001711205.1 2695941 R 31964 CDS YP_001711206.1 170782872 6158127 2697071..2697880 1 NC_010407.1 pyrroline-5-carboxylate reductase 2697880 proC 6158127 proC Clavibacter michiganensis subsp. sepedonicus pyrroline-5-carboxylate reductase YP_001711206.1 2697071 D 31964 CDS YP_001711207.1 170782873 6158884 complement(2697929..2698597) 1 NC_010407.1 hypothetical protein 2698597 6158884 CMS_2551 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711207.1 2697929 R 31964 CDS YP_001711208.1 170782874 6158128 complement(2698651..2700075) 1 NC_010407.1 cation transport protein 2700075 6158128 CMS_2552 Clavibacter michiganensis subsp. sepedonicus cation transport protein YP_001711208.1 2698651 R 31964 CDS YP_001711209.1 170782875 6158129 2700155..2700700 1 NC_010407.1 ArsR family transcriptional regulator 2700700 6158129 CMS_2553 Clavibacter michiganensis subsp. sepedonicus ArsR family transcriptional regulator YP_001711209.1 2700155 D 31964 CDS YP_001711210.1 170782876 6158130 2700823..2701062 1 NC_010407.1 excisionase 2701062 xis 6158130 xis Clavibacter michiganensis subsp. sepedonicus excisionase YP_001711210.1 2700823 D 31964 CDS YP_001711211.1 170782877 6159099 2701137..2701235 1 NC_010407.1 hypothetical protein 2701235 6159099 CMS_2555 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711211.1 2701137 D 31964 CDS YP_001711212.1 170782878 6158131 complement(2701354..2702106) 1 NC_010407.1 hydrolase 2702106 6158131 CMS_2556 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001711212.1 2701354 R 31964 CDS YP_001711213.1 170782879 6158132 2702141..2702458 1 NC_010407.1 hypothetical protein 2702458 6158132 CMS_2557 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711213.1 2702141 D 31964 CDS YP_001711214.1 170782880 6158133 2702493..2702795 1 NC_010407.1 hypothetical protein 2702795 6158133 CMS_2558 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711214.1 2702493 D 31964 CDS YP_001711215.1 170782881 6158134 2702839..2703480 1 NC_010407.1 ABC transporter ATP-binding protein 2703480 6158134 CMS_2559 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711215.1 2702839 D 31964 CDS YP_001711216.1 170782882 6158135 2703477..2705003 1 NC_010407.1 transport protein 2705003 6158135 CMS_2560 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711216.1 2703477 D 31964 CDS YP_001711217.1 170782883 6158136 complement(2705030..2705245) 1 NC_010407.1 hypothetical protein 2705245 6158136 CMS_2561 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711217.1 2705030 R 31964 CDS YP_001711218.1 170782884 6158137 complement(2705322..2706374) 1 NC_010407.1 Recent fusion suggested by GC Frameplot; hypothetical protein 2706374 6158137 CMS_2562 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711218.1 2705322 R 31964 CDS YP_001711219.1 170782885 6158138 complement(2706367..2707596) 1 NC_010407.1 transcriptional regulator 2707596 6158138 CMS_2563 Clavibacter michiganensis subsp. sepedonicus transcriptional regulator YP_001711219.1 2706367 R 31964 CDS YP_001711220.1 170782886 6158139 complement(2707781..2709097) 1 NC_010407.1 aspartyl-tRNA synthetase 2709097 aspS 6158139 aspS Clavibacter michiganensis subsp. sepedonicus aspartyl-tRNA synthetase YP_001711220.1 2707781 R 31964 CDS YP_001711221.1 170782887 6158615 2709218..2710060 1 NC_010407.1 hypothetical protein 2710060 6158615 CMS_2565 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711221.1 2709218 D 31964 CDS YP_001711222.1 170782888 6158140 2710057..2710686 1 NC_010407.1 hypothetical protein 2710686 6158140 CMS_2566 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711222.1 2710057 D 31964 CDS YP_001711223.1 170782889 6158141 2710746..2711600 1 NC_010407.1 hypothetical protein 2711600 6158141 CMS_2567 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711223.1 2710746 D 31964 CDS YP_001711224.1 170782890 6158142 complement(2711653..2712471) 1 NC_010407.1 hypothetical protein 2712471 6158142 CMS_2568 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711224.1 2711653 R 31964 CDS YP_001711225.1 170782891 6158143 complement(2712590..2715088) 1 NC_010407.1 excinuclease ABC subunit A 2715088 uvrA 6158143 uvrA Clavibacter michiganensis subsp. sepedonicus excinuclease ABC subunit A YP_001711225.1 2712590 R 31964 CDS YP_001711226.1 170782892 6159090 complement(2715199..2715411) 1 NC_010407.1 hypothetical protein 2715411 6159090 CMS_2570 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711226.1 2715199 R 31964 CDS YP_001711227.1 170782893 6158144 complement(2715590..2717611) 1 NC_010407.1 beta-galactosidase 2717611 6158144 CMS_2571 Clavibacter michiganensis subsp. sepedonicus beta-galactosidase YP_001711227.1 2715590 R 31964 CDS YP_001711228.1 170782894 6158146 2719316..2720203 1 NC_010407.1 transport protein 2720203 6158146 CMS_2574 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711228.1 2719316 D 31964 CDS YP_001711229.1 170782895 6158147 2720207..2721109 1 NC_010407.1 transport protein 2721109 6158147 CMS_2575 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711229.1 2720207 D 31964 CDS YP_001711230.1 170782896 6158148 2721135..2722151 1 NC_010407.1 LacI family transcriptional regulator 2722151 6158148 CMS_2576 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001711230.1 2721135 D 31964 CDS YP_001711231.1 170782897 6158149 complement(2722231..2723274) 1 NC_010407.1 RNA polymerase principal sigma factor HrdD 2723274 hrdD 6158149 hrdD Clavibacter michiganensis subsp. sepedonicus RNA polymerase principal sigma factor HrdD YP_001711231.1 2722231 R 31964 CDS YP_001711232.1 170782898 6158760 2723630..2724235 1 NC_010407.1 phosphoglycerate mutase related enzyme 2724235 6158760 CMS_2578 Clavibacter michiganensis subsp. sepedonicus phosphoglycerate mutase related enzyme YP_001711232.1 2723630 D 31964 CDS YP_001711233.1 170782899 6158150 2724232..2724843 1 NC_010407.1 lipoprotein 2724843 6158150 CMS_2579 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711233.1 2724232 D 31964 CDS YP_001711234.1 170782900 6158151 2724844..2725584 1 NC_010407.1 cytochrome C biogenesis protein 2725584 6158151 CMS_2580 Clavibacter michiganensis subsp. sepedonicus cytochrome C biogenesis protein YP_001711234.1 2724844 D 31964 CDS YP_001711235.1 170782901 6158152 2725568..2727214 1 NC_010407.1 cytochrome synthesis protein 2727214 6158152 CMS_2581 Clavibacter michiganensis subsp. sepedonicus cytochrome synthesis protein YP_001711235.1 2725568 D 31964 CDS YP_001711236.1 170782902 6158153 2727211..2728236 1 NC_010407.1 cytochrome biogenesis protein 2728236 6158153 CMS_2582 Clavibacter michiganensis subsp. sepedonicus cytochrome biogenesis protein YP_001711236.1 2727211 D 31964 CDS YP_001711237.1 170782903 6158154 complement(2728276..2729259) 1 NC_010407.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 2729259 menC 6158154 menC Clavibacter michiganensis subsp. sepedonicus O-succinylbenzoate synthase YP_001711237.1 2728276 R 31964 CDS YP_001711238.1 170782904 6158806 2729314..2730225 1 NC_010407.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 2730225 menB 6158806 menB Clavibacter michiganensis subsp. sepedonicus naphthoate synthase YP_001711238.1 2729314 D 31964 CDS YP_001711239.1 170782905 6158805 2730287..2731459 1 NC_010407.1 O-succinylbenzoate--CoA ligase 2731459 menE 6158805 menE Clavibacter michiganensis subsp. sepedonicus O-succinylbenzoate--CoA ligase YP_001711239.1 2730287 D 31964 CDS YP_001711240.1 170782906 6158808 complement(2731549..2731722) 1 NC_010407.1 general stress response protein 2731722 6158808 CMS_2586 Clavibacter michiganensis subsp. sepedonicus general stress response protein YP_001711240.1 2731549 R 31964 CDS YP_001711241.1 170782907 6158155 2731855..2732163 1 NC_010407.1 hypothetical protein 2732163 6158155 CMS_2587 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711241.1 2731855 D 31964 CDS YP_001711242.1 170782908 6158156 2732286..2733248 1 NC_010407.1 N/R; insertion element IS1121 transposase 2733248 6158156 CMS_2588 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711242.1 2732286 D 31964 CDS YP_001711243.1 170782909 6158157 complement(2733259..2735067) 1 NC_010407.1 ABC transporter ATP-binding protein 2735067 6158157 CMS_2589 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711243.1 2733259 R 31964 CDS YP_001711244.1 170782910 6158158 complement(2735064..2736836) 1 NC_010407.1 ABC transporter ATP-binding protein 2736836 6158158 CMS_2590 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711244.1 2735064 R 31964 CDS YP_001711245.1 170782911 6158159 complement(2737516..2738700) 1 NC_010407.1 extra N-terminal integral membrane region ALL other homologues; integral membrane NG,NG-dimethylarginine dimethylaminohydrolase 2738700 6158159 CMS_2591 Clavibacter michiganensis subsp. sepedonicus integral membrane NG,NG-dimethylarginine dimethylaminohydrolase YP_001711245.1 2737516 R 31964 CDS YP_001711246.1 170782912 6159113 complement(2744958..2746583) 1 NC_010407.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2746583 purH 6159113 purH Clavibacter michiganensis subsp. sepedonicus bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001711246.1 2744958 R 31964 CDS YP_001711247.1 170782913 6158900 complement(2746580..2747179) 1 NC_010407.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 2747179 purN 6158900 purN Clavibacter michiganensis subsp. sepedonicus phosphoribosylglycinamide formyltransferase YP_001711247.1 2746580 R 31964 CDS YP_001711248.1 170782914 6158903 complement(2747183..2748463) 1 NC_010407.1 hypothetical protein 2748463 6158903 CMS_2594 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711248.1 2747183 R 31964 CDS YP_001711249.1 170782915 6158161 complement(2748625..2749512) 1 NC_010407.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 2749512 sucD 6158161 sucD Clavibacter michiganensis subsp. sepedonicus succinyl-CoA synthetase subunit alpha YP_001711249.1 2748625 R 31964 CDS YP_001711250.1 170782916 6159001 complement(2749539..2750711) 1 NC_010407.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2750711 sucC 6159001 sucC Clavibacter michiganensis subsp. sepedonicus succinyl-CoA synthetase subunit beta YP_001711250.1 2749539 R 31964 CDS YP_001711251.1 170782917 6159000 2750950..2751771 1 NC_010407.1 hypothetical protein 2751771 6159000 CMS_2597 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711251.1 2750950 D 31964 CDS YP_001711252.1 170782918 6158163 complement(2752642..2755089) 1 NC_010407.1 ATP-dependent DNA helicase 2755089 6158163 CMS_2600 Clavibacter michiganensis subsp. sepedonicus ATP-dependent DNA helicase YP_001711252.1 2752642 R 31964 CDS YP_001711253.1 170782919 6158164 2755416..2756378 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2756378 6158164 CMS_2601 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711253.1 2755416 D 31964 CDS YP_001711254.1 170782920 6158165 complement(2756422..2757255) 1 NC_010407.1 hypothetical protein 2757255 6158165 CMS_2602 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711254.1 2756422 R 31964 CDS YP_001711255.1 170782921 6158166 2757303..2757623 1 NC_010407.1 hypothetical protein 2757623 6158166 CMS_2603 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711255.1 2757303 D 31964 CDS YP_001711256.1 170782922 6158167 complement(2757648..2758544) 1 NC_010407.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 2758544 ubiA 6158167 ubiA Clavibacter michiganensis subsp. sepedonicus prenyltransferase YP_001711256.1 2757648 R 31964 CDS YP_001711257.1 170782923 6158168 complement(2758537..2758905) 1 NC_010407.1 c50 carotenoid epsilon cyclase 2758905 6158168 CMS_2605 Clavibacter michiganensis subsp. sepedonicus c50 carotenoid epsilon cyclase YP_001711257.1 2758537 R 31964 CDS YP_001711258.1 170782924 6158169 complement(2758902..2759246) 1 NC_010407.1 c50 carotenoid epsilon cyclase 2759246 6158169 CMS_2606 Clavibacter michiganensis subsp. sepedonicus c50 carotenoid epsilon cyclase YP_001711258.1 2758902 R 31964 CDS YP_001711259.1 170782925 6158170 complement(2759246..2761891) 1 NC_010407.1 bifunctional enzyme phytoene desaturase/synthetase 2761891 6158170 CMS_2607 Clavibacter michiganensis subsp. sepedonicus bifunctional enzyme phytoene desaturase/synthetase YP_001711259.1 2759246 R 31964 CDS YP_001711260.1 170782926 6158171 complement(2761888..2762910) 1 NC_010407.1 geranylgeranyl pyrophosphate synthase 2762910 6158171 CMS_2608 Clavibacter michiganensis subsp. sepedonicus geranylgeranyl pyrophosphate synthase YP_001711260.1 2761888 R 31964 CDS YP_001711261.1 170782927 6158172 2763003..2763575 1 NC_010407.1 catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate; isopentenyl-diphosphate delta-isomerase 2763575 idi 6158172 idi Clavibacter michiganensis subsp. sepedonicus isopentenyl-diphosphate delta-isomerase YP_001711261.1 2763003 D 31964 CDS YP_001711262.1 170782928 6158763 2763745..2765037 1 NC_010407.1 N/R; insertion element ISCmi3 transposase 2765037 6158763 CMS_2610 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi3 transposase YP_001711262.1 2763745 D 31964 CDS YP_001711263.1 170782929 6158173 complement(2765107..2766846) 1 NC_010407.1 alpha-glucosidase 2766846 6158173 CMS_2611 Clavibacter michiganensis subsp. sepedonicus alpha-glucosidase YP_001711263.1 2765107 R 31964 CDS YP_001711264.1 170782930 6158174 2767007..2767945 1 NC_010407.1 oxidoreductase 2767945 6158174 CMS_2612 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001711264.1 2767007 D 31964 CDS YP_001711265.1 170782931 6159053 2768449..2768640 1 NC_010407.1 hypothetical protein 2768640 6159053 CMS_2613 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711265.1 2768449 D 31964 CDS YP_001711267.1 170782933 6158177 2769246..2769689 1 NC_010407.1 hypothetical protein 2769689 6158177 CMS_2615 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711267.1 2769246 D 31964 CDS YP_001711268.1 170782934 6158178 2769737..2770120 1 NC_010407.1 hypothetical protein 2770120 6158178 CMS_2616 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711268.1 2769737 D 31964 CDS YP_001711269.1 170782935 6158179 2770127..2771281 1 NC_010407.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2771281 murB 6158179 murB Clavibacter michiganensis subsp. sepedonicus UDP-N-acetylenolpyruvoylglucosamine reductase YP_001711269.1 2770127 D 31964 CDS YP_001711270.1 170782936 6158829 complement(2773267..2774484) 1 NC_010407.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2774484 aspC 6158829 aspC Clavibacter michiganensis subsp. sepedonicus aspartate aminotransferase YP_001711270.1 2773267 R 31964 CDS YP_001711271.1 170782937 6159066 2774834..2775106 1 NC_010407.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 2775106 secE 6159066 secE Clavibacter michiganensis subsp. sepedonicus preprotein translocase subunit SecE YP_001711271.1 2774834 D 31964 CDS YP_001711272.1 170782938 6158983 2775292..2776329 1 NC_010407.1 transcription antitermination protein 2776329 nusG 6158983 nusG Clavibacter michiganensis subsp. sepedonicus transcription antitermination protein YP_001711272.1 2775292 D 31964 CDS YP_001711273.1 170782939 6158845 2776383..2776814 1 NC_010407.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 2776814 rplK 6158845 rplK Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L11 YP_001711273.1 2776383 D 31964 CDS YP_001711274.1 170782940 6158947 2776914..2777600 1 NC_010407.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 2777600 rplA 6158947 rplA Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L1 YP_001711274.1 2776914 D 31964 CDS YP_001711275.1 170782941 6158945 2777753..2778304 1 NC_010407.1 acetyltransferase 2778304 6158945 CMS_2626 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001711275.1 2777753 D 31964 CDS YP_001711276.1 170782942 6158180 complement(2778316..2779272) 1 NC_010407.1 zinc-binding oxidoreductase 2779272 6158180 CMS_2627 Clavibacter michiganensis subsp. sepedonicus zinc-binding oxidoreductase YP_001711276.1 2778316 R 31964 CDS YP_001711277.1 170782943 6158182 complement(2779882..2780844) 1 NC_010407.1 P/R; insertion element IS1121 transposase 2780844 6158182 CMS_2629 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711277.1 2779882 R 31964 CDS YP_001711278.1 170782944 6158184 complement(2782003..2782734) 1 NC_010407.1 hypothetical protein 2782734 6158184 CMS_2631 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711278.1 2782003 R 31964 CDS YP_001711279.1 170782945 6158185 2782987..2783790 1 NC_010407.1 hypothetical protein 2783790 6158185 CMS_2632 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711279.1 2782987 D 31964 CDS YP_001711280.1 170782946 6158187 2786124..2786891 1 NC_010407.1 hypothetical protein 2786891 6158187 CMS_2635 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711280.1 2786124 D 31964 CDS YP_001711281.1 170782947 6158188 complement(2786970..2788106) 1 NC_010407.1 hypothetical protein 2788106 6158188 CMS_2636 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711281.1 2786970 R 31964 CDS YP_001711282.1 170782948 6158189 2788141..2788578 1 NC_010407.1 hypothetical protein 2788578 6158189 CMS_2637 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711282.1 2788141 D 31964 CDS YP_001711283.1 170782949 6158190 complement(2788690..2788968) 1 NC_010407.1 hypothetical protein 2788968 6158190 CMS_2638 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711283.1 2788690 R 31964 CDS YP_001711284.1 170782950 6158191 2789050..2789754 1 NC_010407.1 two component response regulator 2789754 6158191 CMS_2639 Clavibacter michiganensis subsp. sepedonicus two component response regulator YP_001711284.1 2789050 D 31964 CDS YP_001711285.1 170782951 6158192 complement(2789799..2789972) 1 NC_010407.1 hypothetical protein 2789972 6158192 CMS_2640 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711285.1 2789799 R 31964 CDS YP_001711286.1 170782952 6158193 complement(2789979..2790761) 1 NC_010407.1 hypothetical protein 2790761 6158193 CMS_2641 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711286.1 2789979 R 31964 CDS YP_001711287.1 170782953 6158194 2791142..2792215 1 NC_010407.1 hypothetical protein 2792215 6158194 CMS_2642 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711287.1 2791142 D 31964 CDS YP_001711288.1 170782954 6158195 complement(2792254..2792856) 1 NC_010407.1 hypothetical protein 2792856 6158195 CMS_2643 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711288.1 2792254 R 31964 CDS YP_001711289.1 170782955 6158196 complement(2792928..2793647) 1 NC_010407.1 hypothetical protein 2793647 6158196 CMS_2644 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711289.1 2792928 R 31964 CDS YP_001711290.1 170782956 6158197 complement(2793638..2794111) 1 NC_010407.1 hypothetical protein 2794111 6158197 CMS_2645 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711290.1 2793638 R 31964 CDS YP_001711291.1 170782957 6158198 complement(2794238..2795296) 1 NC_010407.1 glycosyltransferase 2795296 6158198 CMS_2646 Clavibacter michiganensis subsp. sepedonicus glycosyltransferase YP_001711291.1 2794238 R 31964 CDS YP_001711292.1 170782958 6158199 complement(2795358..2796023) 1 NC_010407.1 hypothetical protein 2796023 6158199 CMS_2647 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711292.1 2795358 R 31964 CDS YP_001711293.1 170782959 6158200 complement(2796387..2796662) 1 NC_010407.1 hypothetical protein 2796662 6158200 CMS_2648 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711293.1 2796387 R 31964 CDS YP_001711294.1 170782960 6158201 complement(2796702..2797649) 1 NC_010407.1 hypothetical protein 2797649 6158201 CMS_2649 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711294.1 2796702 R 31964 CDS YP_001711295.1 170782961 6158202 complement(2797646..2797882) 1 NC_010407.1 hypothetical protein 2797882 6158202 CMS_2650 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711295.1 2797646 R 31964 CDS YP_001711296.1 170782962 6158203 2797928..2798398 1 NC_010407.1 MarR family transcriptional regulator 2798398 6158203 CMS_2651 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711296.1 2797928 D 31964 CDS YP_001711297.1 170782963 6158204 complement(2798462..2799304) 1 NC_010407.1 C-terminal extension relative to homologues; death on curing protein 2799304 doc 6158204 doc Clavibacter michiganensis subsp. sepedonicus death on curing protein YP_001711297.1 2798462 R 31964 CDS YP_001711298.1 170782964 6158671 2799680..2800525 1 NC_010407.1 hypothetical protein 2800525 6158671 CMS_2654 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711298.1 2799680 D 31964 CDS YP_001711299.1 170782965 6158205 2800519..2801196 1 NC_010407.1 hypothetical protein 2801196 6158205 CMS_2655 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711299.1 2800519 D 31964 CDS YP_001711300.1 170782966 6158206 complement(2801157..2801771) 1 NC_010407.1 hypothetical protein 2801771 6158206 CMS_2656 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711300.1 2801157 R 31964 CDS YP_001711301.1 170782967 6158207 complement(2801771..2803054) 1 NC_010407.1 hypothetical protein 2803054 6158207 CMS_2657 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711301.1 2801771 R 31964 CDS YP_001711302.1 170782968 6158208 2803273..2804889 1 NC_010407.1 glycosyl transferase 2804889 6158208 CMS_2658 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001711302.1 2803273 D 31964 CDS YP_001711303.1 170782969 6158209 2804886..2805989 1 NC_010407.1 glycosyl transferase 2805989 6158209 CMS_2659 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001711303.1 2804886 D 31964 CDS YP_001711304.1 170782970 6158210 2805986..2807899 1 NC_010407.1 glycosyl transferase/isomerase 2807899 6158210 CMS_2660 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase/isomerase YP_001711304.1 2805986 D 31964 CDS YP_001711305.1 170782971 6158211 2807896..2809278 1 NC_010407.1 bifunctional kinase/glycosyl transferase 2809278 6158211 CMS_2661 Clavibacter michiganensis subsp. sepedonicus bifunctional kinase/glycosyl transferase YP_001711305.1 2807896 D 31964 CDS YP_001711306.1 170782972 6158212 2809433..2810026 1 NC_010407.1 short chain oxidoreductase 2810026 6158212 CMS_2662 Clavibacter michiganensis subsp. sepedonicus short chain oxidoreductase YP_001711306.1 2809433 D 31964 CDS YP_001711307.1 170782973 6158213 2810242..2811723 1 NC_010407.1 hypothetical protein 2811723 6158213 CMS_2663 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711307.1 2810242 D 31964 CDS YP_001711308.1 170782974 6158214 complement(2811989..2812600) 1 NC_010407.1 hypothetical protein 2812600 6158214 CMS_2664 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711308.1 2811989 R 31964 CDS YP_001711309.1 170782975 6158215 2812705..2813199 1 NC_010407.1 hypothetical protein 2813199 6158215 CMS_2665 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711309.1 2812705 D 31964 CDS YP_001711310.1 170782976 6158218 2815949..2817268 1 NC_010407.1 hypothetical protein 2817268 6158218 CMS_2669 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711310.1 2815949 D 31964 CDS YP_001711311.1 170782977 6158219 complement(2817309..2818445) 1 NC_010407.1 glycosyl transferase 2818445 6158219 CMS_2670 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001711311.1 2817309 R 31964 CDS YP_001711312.1 170782978 6158220 complement(2818522..2819613) 1 NC_010407.1 LacI family transcriptional regulator 2819613 6158220 CMS_2671 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001711312.1 2818522 R 31964 CDS YP_001711313.1 170782979 6158221 2819669..2820610 1 NC_010407.1 transport protein 2820610 6158221 CMS_2672 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711313.1 2819669 D 31964 CDS YP_001711314.1 170782980 6158222 2820613..2821563 1 NC_010407.1 transport protein 2821563 6158222 CMS_2673 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711314.1 2820613 D 31964 CDS YP_001711315.1 170782981 6158223 2821616..2822983 1 NC_010407.1 substrate-binding transport lipoprotein 2822983 6158223 CMS_2674 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport lipoprotein YP_001711315.1 2821616 D 31964 CDS YP_001711316.1 170782982 6158224 2823016..2824863 1 NC_010407.1 beta-galactosidase 2824863 bga 6158224 bga Clavibacter michiganensis subsp. sepedonicus beta-galactosidase YP_001711316.1 2823016 D 31964 CDS YP_001711317.1 170782983 6158625 complement(2824918..2825949) 1 NC_010407.1 bacteriophage protein 2825949 6158625 CMS_2676 Clavibacter michiganensis subsp. sepedonicus bacteriophage protein YP_001711317.1 2824918 R 31964 CDS YP_001711318.1 170782984 6158225 2826106..2827596 1 NC_010407.1 aldehyde dehydrogenase 2827596 6158225 CMS_2677 Clavibacter michiganensis subsp. sepedonicus aldehyde dehydrogenase YP_001711318.1 2826106 D 31964 CDS YP_001711319.1 170782985 6158227 2829200..2829442 1 NC_010407.1 hypothetical protein 2829442 6158227 CMS_2680 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711319.1 2829200 D 31964 CDS YP_001711320.1 170782986 6158228 complement(2829567..2829812) 1 NC_010407.1 hypothetical protein 2829812 6158228 CMS_2681 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711320.1 2829567 R 31964 CDS YP_001711321.1 170782987 6158229 complement(2829954..2830094) 1 NC_010407.1 hypothetical protein 2830094 6158229 CMS_2682 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711321.1 2829954 R 31964 CDS YP_001711322.1 170782988 6158230 complement(2830237..2830410) 1 NC_010407.1 hypothetical protein 2830410 6158230 CMS_2683 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711322.1 2830237 R 31964 CDS YP_001711323.1 170782989 6158231 2830501..2831067 1 NC_010407.1 hypothetical protein 2831067 6158231 CMS_2684 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711323.1 2830501 D 31964 CDS YP_001711324.1 170782990 6158232 complement(2831064..2831834) 1 NC_010407.1 hypothetical protein 2831834 6158232 CMS_2685 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711324.1 2831064 R 31964 CDS YP_001711325.1 170782991 6158233 complement(2832090..2832548) 1 NC_010407.1 hypothetical protein 2832548 6158233 CMS_2686 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711325.1 2832090 R 31964 CDS YP_001711326.1 170782992 6158234 complement(2832568..2833440) 1 NC_010407.1 hypothetical protein 2833440 6158234 CMS_2687 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711326.1 2832568 R 31964 CDS YP_001711327.1 170782993 6158235 complement(2833580..2834107) 1 NC_010407.1 hypothetical protein 2834107 6158235 CMS_2688 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711327.1 2833580 R 31964 CDS YP_001711328.1 170782994 6158236 complement(2834205..2834708) 1 NC_010407.1 DNA-binding protein 2834708 6158236 CMS_2689 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001711328.1 2834205 R 31964 CDS YP_001711329.1 170782995 6158237 complement(2834750..2835931) 1 NC_010407.1 exported peptidase 2835931 6158237 CMS_2690 Clavibacter michiganensis subsp. sepedonicus exported peptidase YP_001711329.1 2834750 R 31964 CDS YP_001711330.1 170782996 6158238 complement(2835928..2836518) 1 NC_010407.1 hypothetical protein 2836518 6158238 CMS_2691 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711330.1 2835928 R 31964 CDS YP_001711331.1 170782997 6158239 complement(2836518..2837933) 1 NC_010407.1 hypothetical protein 2837933 6158239 CMS_2692 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711331.1 2836518 R 31964 CDS YP_001711332.1 170782998 6158240 2838189..2838800 1 NC_010407.1 hypothetical protein 2838800 6158240 CMS_2693 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711332.1 2838189 D 31964 CDS YP_001711333.1 170782999 6158241 2838827..2839150 1 NC_010407.1 hypothetical protein 2839150 6158241 CMS_2694 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711333.1 2838827 D 31964 CDS YP_001711334.1 170783000 6158242 2839202..2839954 1 NC_010407.1 hypothetical protein 2839954 6158242 CMS_2695 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711334.1 2839202 D 31964 CDS YP_001711335.1 170783001 6158243 2840027..2841523 1 NC_010407.1 hypothetical protein 2841523 6158243 CMS_2696 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711335.1 2840027 D 31964 CDS YP_001711336.1 170783002 6158244 2841620..2843044 1 NC_010407.1 hypothetical protein 2843044 6158244 CMS_2697 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711336.1 2841620 D 31964 CDS YP_001711337.1 170783003 6158245 2843197..2844675 1 NC_010407.1 ATP-binding protein 2844675 6158245 CMS_2698 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001711337.1 2843197 D 31964 CDS YP_001711338.1 170783004 6158246 2844672..2846468 1 NC_010407.1 conjugal transfer protein 2846468 6158246 CMS_2699 Clavibacter michiganensis subsp. sepedonicus conjugal transfer protein YP_001711338.1 2844672 D 31964 CDS YP_001711339.1 170783005 6158247 2846462..2846932 1 NC_010407.1 hypothetical protein 2846932 6158247 CMS_2700 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711339.1 2846462 D 31964 CDS YP_001711340.1 170783006 6158248 2846929..2847774 1 NC_010407.1 hypothetical protein 2847774 6158248 CMS_2701 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711340.1 2846929 D 31964 CDS YP_001711341.1 170783007 6158249 complement(2847791..2849002) 1 NC_010407.1 C-terminal domain similar to upstream CDS; hypothetical protein 2849002 6158249 CMS_2702 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711341.1 2847791 R 31964 CDS YP_001711342.1 170783008 6158250 complement(2849158..2850486) 1 NC_010407.1 C-terminal domain similar to downstream CDS; hypothetical protein 2850486 6158250 CMS_2703 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711342.1 2849158 R 31964 CDS YP_001711343.1 170783009 6158251 complement(2850486..2850908) 1 NC_010407.1 regulator 2850908 6158251 CMS_2704 Clavibacter michiganensis subsp. sepedonicus regulator YP_001711343.1 2850486 R 31964 CDS YP_001711344.1 170783010 6158252 complement(2850901..2851269) 1 NC_010407.1 anti-sigma factor antagonist 2851269 6158252 CMS_2705 Clavibacter michiganensis subsp. sepedonicus anti-sigma factor antagonist YP_001711344.1 2850901 R 31964 CDS YP_001711345.1 170783011 6158253 2851535..2851903 1 NC_010407.1 hypothetical protein 2851903 6158253 CMS_2706 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711345.1 2851535 D 31964 CDS YP_001711346.1 170783012 6158254 complement(2851900..2852538) 1 NC_010407.1 mutase 2852538 6158254 CMS_2707 Clavibacter michiganensis subsp. sepedonicus mutase YP_001711346.1 2851900 R 31964 CDS YP_001711347.1 170783013 6158255 2852615..2853013 1 NC_010407.1 hypothetical protein 2853013 B1047H05.25 6158255 B1047H05.25 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711347.1 2852615 D 31964 CDS YP_001711348.1 170783014 6158624 2852992..2853795 1 NC_010407.1 hypothetical protein 2853795 6158624 CMS_2709 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711348.1 2852992 D 31964 CDS YP_001711349.1 170783015 6158256 2853882..2854841 1 NC_010407.1 hypothetical protein 2854841 6158256 CMS_2710 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711349.1 2853882 D 31964 CDS YP_001711350.1 170783016 6158257 2854863..2855432 1 NC_010407.1 hypothetical protein 2855432 6158257 CMS_2711 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711350.1 2854863 D 31964 CDS YP_001711351.1 170783017 6158258 complement(2857316..2857738) 1 NC_010407.1 acetyltransferase 2857738 6158258 CMS_2713 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001711351.1 2857316 R 31964 CDS YP_001711352.1 170783018 6158259 2857838..2858962 1 NC_010407.1 sortase-sorted surface protein 2858962 6158259 CMS_2714 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface protein YP_001711352.1 2857838 D 31964 CDS YP_001711353.1 170783019 6158260 2859116..2860075 1 NC_010407.1 transport protein 2860075 6158260 CMS_2715 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711353.1 2859116 D 31964 CDS YP_001711354.1 170783020 6158261 2860075..2861070 1 NC_010407.1 transport protein 2861070 6158261 CMS_2716 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711354.1 2860075 D 31964 CDS YP_001711355.1 170783021 6158262 complement(2861072..2862331) 1 NC_010407.1 hypothetical protein 2862331 6158262 CMS_2717 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711355.1 2861072 R 31964 CDS YP_001711356.1 170783022 6158263 complement(2862339..2862620) 1 NC_010407.1 transcriptional regulator 2862620 6158263 CMS_2718 Clavibacter michiganensis subsp. sepedonicus transcriptional regulator YP_001711356.1 2862339 R 31964 CDS YP_001711357.1 170783023 6158264 complement(2862688..2863011) 1 NC_010407.1 quaternary ammonium compound efflux protein 2863011 6158264 CMS_2719 Clavibacter michiganensis subsp. sepedonicus quaternary ammonium compound efflux protein YP_001711357.1 2862688 R 31964 CDS YP_001711358.1 170783024 6158265 complement(2863137..2864495) 1 NC_010407.1 substrate-binding transport protein 2864495 6158265 CMS_2720 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001711358.1 2863137 R 31964 CDS YP_001711359.1 170783025 6158266 complement(2864620..2865522) 1 NC_010407.1 hydrolase 2865522 6158266 CMS_2721 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001711359.1 2864620 R 31964 CDS YP_001711360.1 170783026 6158267 complement(2865534..2866523) 1 NC_010407.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2866523 glpX 6158267 glpX Clavibacter michiganensis subsp. sepedonicus fructose 1,6-bisphosphatase II YP_001711360.1 2865534 R 31964 CDS YP_001711361.1 170783027 6158726 complement(2866582..2867727) 1 NC_010407.1 hypothetical protein 2867727 6158726 CMS_2723 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711361.1 2866582 R 31964 CDS YP_001711362.1 170783028 6158268 complement(2868329..2869291) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2869291 6158268 CMS_2724 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711362.1 2868329 R 31964 CDS YP_001711363.1 170783029 6158269 complement(2869389..2870384) 1 NC_010407.1 transport protein 2870384 6158269 CMS_2725 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711363.1 2869389 R 31964 CDS YP_001711364.1 170783030 6158270 complement(2870489..2871499) 1 NC_010407.1 transport protein 2871499 6158270 CMS_2726 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711364.1 2870489 R 31964 CDS YP_001711365.1 170783031 6158271 complement(2871606..2872703) 1 NC_010407.1 substrate-binding transport lipoprotein 2872703 6158271 CMS_2727 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport lipoprotein YP_001711365.1 2871606 R 31964 CDS YP_001711366.1 170783032 6158272 complement(2872906..2873856) 1 NC_010407.1 NUDIX hydrolase 2873856 6158272 CMS_2728 Clavibacter michiganensis subsp. sepedonicus NUDIX hydrolase YP_001711366.1 2872906 R 31964 CDS YP_001711367.1 170783033 6158273 complement(2873888..2876071) 1 NC_010407.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2876071 ppk 6158273 ppk Clavibacter michiganensis subsp. sepedonicus polyphosphate kinase YP_001711367.1 2873888 R 31964 CDS YP_001711368.1 170783034 6158875 complement(2876165..2877079) 1 NC_010407.1 acetyltransferase 2877079 6158875 CMS_2730 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001711368.1 2876165 R 31964 CDS YP_001711369.1 170783035 6158274 complement(2877048..2877740) 1 NC_010407.1 transcriptional regulatory protein 2877740 6158274 CMS_2731 Clavibacter michiganensis subsp. sepedonicus transcriptional regulatory protein YP_001711369.1 2877048 R 31964 CDS YP_001711370.1 170783036 6158275 2877794..2878060 1 NC_010407.1 hypothetical protein 2878060 6158275 CMS_2732 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711370.1 2877794 D 31964 CDS YP_001711371.1 170783037 6158276 2878104..2878220 1 NC_010407.1 small membrane protein 2878220 6158276 CMS_2733 Clavibacter michiganensis subsp. sepedonicus small membrane protein YP_001711371.1 2878104 D 31964 CDS YP_001711372.1 170783038 6158277 2878232..2878831 1 NC_010407.1 hypothetical protein 2878831 6158277 CMS_2734 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711372.1 2878232 D 31964 CDS YP_001711373.1 170783039 6158278 2878821..2879975 1 NC_010407.1 aminomethyltransferase 2879975 6158278 CMS_2735 Clavibacter michiganensis subsp. sepedonicus aminomethyltransferase YP_001711373.1 2878821 D 31964 CDS YP_001711374.1 170783040 6158279 2879959..2881080 1 NC_010407.1 hypothetical protein 2881080 6158279 CMS_2736 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711374.1 2879959 D 31964 CDS YP_001711375.1 170783041 6158280 2881826..2883220 1 NC_010407.1 hypothetical protein 2883220 6158280 CMS_2737 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711375.1 2881826 D 31964 CDS YP_001711376.1 170783042 6158281 complement(2883260..2884084) 1 NC_010407.1 hypothetical protein 2884084 6158281 CMS_2738 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711376.1 2883260 R 31964 CDS YP_001711377.1 170783043 6158282 2884120..2884875 1 NC_010407.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 2884875 gpmA 6158282 gpmA Clavibacter michiganensis subsp. sepedonicus phosphoglyceromutase YP_001711377.1 2884120 D 31964 CDS YP_001711378.1 170783044 6158734 complement(2884963..2885607) 1 NC_010407.1 phosphate transport protein 2885607 phoU 6158734 phoU Clavibacter michiganensis subsp. sepedonicus phosphate transport protein YP_001711378.1 2884963 R 31964 CDS YP_001711379.1 170783045 6158867 2885835..2886983 1 NC_010407.1 two-component system sensor kinase 2886983 6158867 CMS_2741 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001711379.1 2885835 D 31964 CDS YP_001711380.1 170783046 6158283 2886980..2887660 1 NC_010407.1 two-component system response regulator 2887660 6158283 CMS_2742 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001711380.1 2886980 D 31964 CDS YP_001711381.1 170783047 6158284 complement(2887747..2888313) 1 NC_010407.1 lipoprotein 2888313 6158284 CMS_2743 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711381.1 2887747 R 31964 CDS YP_001711382.1 170783048 6158285 2888479..2888961 1 NC_010407.1 transcription factor regulator 2888961 6158285 CMS_2744 Clavibacter michiganensis subsp. sepedonicus transcription factor regulator YP_001711382.1 2888479 D 31964 CDS YP_001711383.1 170783049 6158286 2889021..2890253 1 NC_010407.1 bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase 2890253 ispDF 6158286 ispDF Clavibacter michiganensis subsp. sepedonicus bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase YP_001711383.1 2889021 D 31964 CDS YP_001711384.1 170783050 6158773 2890337..2891791 1 NC_010407.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2891791 cysS 6158773 cysS Clavibacter michiganensis subsp. sepedonicus cysteinyl-tRNA synthetase YP_001711384.1 2890337 D 31964 CDS YP_001711385.1 170783051 6158652 2891781..2892854 1 NC_010407.1 tRNA/rRNA methyltransferase 2892854 6158652 CMS_2747 Clavibacter michiganensis subsp. sepedonicus tRNA/rRNA methyltransferase YP_001711385.1 2891781 D 31964 CDS YP_001711386.1 170783052 6158287 complement(2892930..2894234) 1 NC_010407.1 hypothetical protein 2894234 6158287 CMS_2748 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711386.1 2892930 R 31964 CDS YP_001711387.1 170783053 6158288 complement(2894336..2895499) 1 NC_010407.1 ABC transporter ATP-binding protein 2895499 6158288 CMS_2749 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711387.1 2894336 R 31964 CDS YP_001711388.1 170783054 6158289 2895751..2896668 1 NC_010407.1 hypothetical protein 2896668 6158289 CMS_2750 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711388.1 2895751 D 31964 CDS YP_001711389.1 170783055 6159065 complement(2896797..2897408) 1 NC_010407.1 nitroreductase 2897408 6159065 CMS_2751 Clavibacter michiganensis subsp. sepedonicus nitroreductase YP_001711389.1 2896797 R 31964 CDS YP_001711390.1 170783056 6158291 complement(2897405..2897869) 1 NC_010407.1 oxidoreductase 2897869 6158291 CMS_2752 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001711390.1 2897405 R 31964 CDS YP_001711391.1 170783057 6158292 2898044..2898373 1 NC_010407.1 hypothetical protein 2898373 6158292 CMS_2753 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711391.1 2898044 D 31964 CDS YP_001711392.1 170783058 6158293 2898407..2898979 1 NC_010407.1 hypothetical protein 2898979 6158293 CMS_2754 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711392.1 2898407 D 31964 CDS YP_001711393.1 170783059 6158294 2899216..2899434 1 NC_010407.1 cold shock protein 2899434 6158294 CMS_2755 Clavibacter michiganensis subsp. sepedonicus cold shock protein YP_001711393.1 2899216 D 31964 CDS YP_001711394.1 170783060 6158295 2899623..2901242 1 NC_010407.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 2901242 groEL 6158295 groEL Clavibacter michiganensis subsp. sepedonicus molecular chaperone GroEL YP_001711394.1 2899623 D 31964 CDS YP_001711395.1 170783061 6158736 complement(2901383..2901673) 1 NC_010407.1 hypothetical protein 2901673 6158736 CMS_2757 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711395.1 2901383 R 31964 CDS YP_001711396.1 170783062 6158296 complement(2901720..2903480) 1 NC_010407.1 two-component system sensor kinase 2903480 6158296 CMS_2758 Clavibacter michiganensis subsp. sepedonicus two-component system sensor kinase YP_001711396.1 2901720 R 31964 CDS YP_001711397.1 170783063 6158297 complement(2903604..2904296) 1 NC_010407.1 two-component system response regulator 2904296 6158297 CMS_2759 Clavibacter michiganensis subsp. sepedonicus two-component system response regulator YP_001711397.1 2903604 R 31964 CDS YP_001711398.1 170783064 6158298 complement(2904374..2906014) 1 NC_010407.1 DNA repair helicase 2906014 6158298 CMS_2760 Clavibacter michiganensis subsp. sepedonicus DNA repair helicase YP_001711398.1 2904374 R 31964 CDS YP_001711399.1 170783065 6158299 complement(2906035..2907906) 1 NC_010407.1 hypothetical protein 2907906 6158299 CMS_2761 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711399.1 2906035 R 31964 CDS YP_001711400.1 170783066 6158300 complement(2907932..2908201) 1 NC_010407.1 hypothetical protein 2908201 6158300 CMS_2762 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711400.1 2907932 R 31964 CDS YP_001711401.1 170783067 6158301 2908314..2908697 1 NC_010407.1 cold shock protein 2908697 6158301 CMS_2763 Clavibacter michiganensis subsp. sepedonicus cold shock protein YP_001711401.1 2908314 D 31964 CDS YP_001711402.1 170783068 6158302 2908690..2909382 1 NC_010407.1 Hydrophilic Asp-repeat in C-terminus; hypothetical protein 2909382 6158302 CMS_2764 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711402.1 2908690 D 31964 CDS YP_001711403.1 170783069 6158303 complement(2909452..2910570) 1 NC_010407.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 2910570 serC 6158303 serC Clavibacter michiganensis subsp. sepedonicus phosphoserine aminotransferase YP_001711403.1 2909452 R 31964 CDS YP_001711404.1 170783070 6158988 2910677..2911375 1 NC_010407.1 metal dependent regulatory protein 2911375 6158988 CMS_2766 Clavibacter michiganensis subsp. sepedonicus metal dependent regulatory protein YP_001711404.1 2910677 D 31964 CDS YP_001711405.1 170783071 6158304 2911699..2912646 1 NC_010407.1 hypothetical protein 2912646 6158304 CMS_2767 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711405.1 2911699 D 31964 CDS YP_001711406.1 170783072 6158305 2912821..2913504 1 NC_010407.1 hypothetical protein 2913504 6158305 CMS_2768 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711406.1 2912821 D 31964 CDS YP_001711407.1 170783073 6158306 2913538..2915634 1 NC_010407.1 endopeptidase 2915634 6158306 CMS_2769 Clavibacter michiganensis subsp. sepedonicus endopeptidase YP_001711407.1 2913538 D 31964 CDS YP_001711408.1 170783074 6158307 complement(2915654..2916418) 1 NC_010407.1 transcriptional regulator 2916418 6158307 CMS_2770 Clavibacter michiganensis subsp. sepedonicus transcriptional regulator YP_001711408.1 2915654 R 31964 CDS YP_001711409.1 170783075 6158309 complement(2918139..2918489) 1 NC_010407.1 hypothetical protein 2918489 6158309 CMS_2772 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711409.1 2918139 R 31964 CDS YP_001711410.1 170783076 6158310 complement(2918855..2919637) 1 NC_010407.1 hypothetical protein 2919637 6158310 CMS_2773 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711410.1 2918855 R 31964 CDS YP_001711411.1 170783077 6158311 2919848..2921455 1 NC_010407.1 hypothetical protein 2921455 6158311 CMS_2774 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711411.1 2919848 D 31964 CDS YP_001711412.1 170783078 6158312 complement(2921465..2922652) 1 NC_010407.1 hydantoin utilization protein 2922652 6158312 CMS_2775 Clavibacter michiganensis subsp. sepedonicus hydantoin utilization protein YP_001711412.1 2921465 R 31964 CDS YP_001711413.1 170783079 6158313 complement(2922649..2924004) 1 NC_010407.1 purine permease 2924004 6158313 CMS_2776 Clavibacter michiganensis subsp. sepedonicus purine permease YP_001711413.1 2922649 R 31964 CDS YP_001711414.1 170783080 6158314 2924477..2924935 1 NC_010407.1 hypothetical protein 2924935 6158314 CMS_2777 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711414.1 2924477 D 31964 CDS YP_001711415.1 170783081 6158315 2924932..2925558 1 NC_010407.1 hypothetical protein 2925558 6158315 CMS_2778 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711415.1 2924932 D 31964 CDS YP_001711416.1 170783082 6158317 2926461..2926637 1 NC_010407.1 hypothetical protein 2926637 6158317 CMS_2780 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711416.1 2926461 D 31964 CDS YP_001711417.1 170783083 6158319 complement(2927465..2929243) 1 NC_010407.1 hypothetical protein 2929243 6158319 CMS_2782 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711417.1 2927465 R 31964 CDS YP_001711418.1 170783084 6158320 complement(2929230..2929574) 1 NC_010407.1 hypothetical protein 2929574 6158320 CMS_2783 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711418.1 2929230 R 31964 CDS YP_001711419.1 170783085 6158321 2929659..2930771 1 NC_010407.1 hypothetical protein 2930771 6158321 CMS_2784 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711419.1 2929659 D 31964 CDS YP_001711420.1 170783086 6158322 complement(2931387..2933414) 1 NC_010407.1 conjugal trasnfer protein 2933414 6158322 CMS_2785 Clavibacter michiganensis subsp. sepedonicus conjugal trasnfer protein YP_001711420.1 2931387 R 31964 CDS YP_001711421.1 170783087 6158323 complement(2933458..2934051) 1 NC_010407.1 hypothetical protein 2934051 6158323 CMS_2786 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711421.1 2933458 R 31964 CDS YP_001711422.1 170783088 6158324 complement(2934089..2934760) 1 NC_010407.1 hypothetical protein 2934760 6158324 CMS_2787 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711422.1 2934089 R 31964 CDS YP_001711423.1 170783089 6158325 complement(2934757..2935344) 1 NC_010407.1 hypothetical protein 2935344 6158325 CMS_2788 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711423.1 2934757 R 31964 CDS YP_001711424.1 170783090 6158326 complement(2935385..2935981) 1 NC_010407.1 hypothetical protein 2935981 6158326 CMS_2789 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711424.1 2935385 R 31964 CDS YP_001711425.1 170783091 6158327 complement(2936026..2936799) 1 NC_010407.1 hypothetical protein 2936799 6158327 CMS_2790 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711425.1 2936026 R 31964 CDS YP_001711426.1 170783092 6158328 complement(2936804..2938879) 1 NC_010407.1 hypothetical protein 2938879 6158328 CMS_2791 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711426.1 2936804 R 31964 CDS YP_001711427.1 170783093 6158329 complement(2938970..2939284) 1 NC_010407.1 hypothetical protein 2939284 6158329 CMS_2792 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711427.1 2938970 R 31964 CDS YP_001711428.1 170783094 6158330 complement(2939302..2939763) 1 NC_010407.1 DNA-binding protein 2939763 6158330 CMS_2793 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001711428.1 2939302 R 31964 CDS YP_001711429.1 170783095 6159032 2940039..2943842 1 NC_010407.1 hypothetical protein 2943842 6159032 CMS_2795 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711429.1 2940039 D 31964 CDS YP_001711430.1 170783096 6158332 complement(2944152..2945114) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 2945114 6158332 CMS_2796 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711430.1 2944152 R 31964 CDS YP_001711431.1 170783097 6158333 2945262..2946332 1 NC_010407.1 hypothetical protein 2946332 6158333 CMS_2797 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711431.1 2945262 D 31964 CDS YP_001711432.1 170783098 6158334 2946329..2947240 1 NC_010407.1 hypothetical protein 2947240 6158334 CMS_2798 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711432.1 2946329 D 31964 CDS YP_001711433.1 170783099 6158335 complement(2947317..2948297) 1 NC_010407.1 hypothetical protein 2948297 6158335 CMS_2799 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711433.1 2947317 R 31964 CDS YP_001711434.1 170783100 6158336 complement(2948649..2949335) 1 NC_010407.1 lipoprotein 2949335 6158336 CMS_2800 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711434.1 2948649 R 31964 CDS YP_001711435.1 170783101 6158337 complement(2949527..2950171) 1 NC_010407.1 hypothetical protein 2950171 6158337 CMS_2801 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711435.1 2949527 R 31964 CDS YP_001711436.1 170783102 6158338 complement(2950171..2950959) 1 NC_010407.1 hypothetical protein 2950959 6158338 CMS_2802 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711436.1 2950171 R 31964 CDS YP_001711437.1 170783103 6158339 complement(2950956..2951777) 1 NC_010407.1 sortase-sorted surface-anchored protein 2951777 6158339 CMS_2803 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface-anchored protein YP_001711437.1 2950956 R 31964 CDS YP_001711438.1 170783104 6158340 complement(2951905..2952606) 1 NC_010407.1 hypothetical protein 2952606 6158340 CMS_2804 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711438.1 2951905 R 31964 CDS YP_001711439.1 170783105 6158341 complement(2952756..2956151) 1 NC_010407.1 lipoprotein 2956151 6158341 CMS_2805 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711439.1 2952756 R 31964 CDS YP_001711440.1 170783106 6158342 2956555..2958426 1 NC_010407.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2958426 dnaK 6158342 dnaK Clavibacter michiganensis subsp. sepedonicus molecular chaperone DnaK YP_001711440.1 2956555 D 31964 CDS YP_001711441.1 170783107 6158669 2958423..2959076 1 NC_010407.1 heat shock protein GrpE 2959076 grpE 6158669 grpE Clavibacter michiganensis subsp. sepedonicus heat shock protein GrpE YP_001711441.1 2958423 D 31964 CDS YP_001711442.1 170783108 6158737 2959197..2960210 1 NC_010407.1 molecular chaperone DnaJ 2960210 dnaJ 6158737 dnaJ Clavibacter michiganensis subsp. sepedonicus molecular chaperone DnaJ YP_001711442.1 2959197 D 31964 CDS YP_001711443.1 170783109 6158668 2960212..2960679 1 NC_010407.1 heat shock protein HspR 2960679 hspR 6158668 hspR Clavibacter michiganensis subsp. sepedonicus heat shock protein HspR YP_001711443.1 2960212 D 31964 CDS YP_001711444.1 170783110 6158761 2960676..2961932 1 NC_010407.1 methyl transferase 2961932 6158761 CMS_2810 Clavibacter michiganensis subsp. sepedonicus methyl transferase YP_001711444.1 2960676 D 31964 CDS YP_001711445.1 170783111 6158343 2962030..2962992 1 NC_010407.1 P/R part of the NRPS disruption; insertion element IS1121 transposase 2962992 6158343 CMS_2811 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711445.1 2962030 D 31964 CDS YP_001711446.1 170783112 6158345 2964835..2966148 1 NC_010407.1 metallopeptidase 2966148 6158345 CMS_2813 Clavibacter michiganensis subsp. sepedonicus metallopeptidase YP_001711446.1 2964835 D 31964 CDS YP_001711447.1 170783113 6158346 2966186..2967424 1 NC_010407.1 ATP-binding protein 2967424 6158346 CMS_2814 Clavibacter michiganensis subsp. sepedonicus ATP-binding protein YP_001711447.1 2966186 D 31964 CDS YP_001711448.1 170783114 6158347 complement(2967452..2968030) 1 NC_010407.1 hypothetical protein 2968030 6158347 CMS_2815 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711448.1 2967452 R 31964 CDS YP_001711449.1 170783115 6158348 complement(2968051..2968755) 1 NC_010407.1 hypothetical protein 2968755 6158348 CMS_2816 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711449.1 2968051 R 31964 CDS YP_001711450.1 170783116 6158349 complement(2968752..2969210) 1 NC_010407.1 acetyl transferase 2969210 6158349 CMS_2817 Clavibacter michiganensis subsp. sepedonicus acetyl transferase YP_001711450.1 2968752 R 31964 CDS YP_001711451.1 170783117 6158350 complement(2969211..2972753) 1 NC_010407.1 bifunctional dehydrogenase 2972753 6158350 CMS_2818 Clavibacter michiganensis subsp. sepedonicus bifunctional dehydrogenase YP_001711451.1 2969211 R 31964 CDS YP_001711452.1 170783118 6158351 2973050..2973943 1 NC_010407.1 LysR family transcriptional regulator 2973943 6158351 CMS_2819 Clavibacter michiganensis subsp. sepedonicus LysR family transcriptional regulator YP_001711452.1 2973050 D 31964 CDS YP_001711453.1 170783119 6158352 complement(2974017..2974865) 1 NC_010407.1 hypothetical protein 2974865 6158352 CMS_2820 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711453.1 2974017 R 31964 CDS YP_001711454.1 170783120 6158353 complement(2974862..2975626) 1 NC_010407.1 hypothetical protein 2975626 6158353 CMS_2821 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711454.1 2974862 R 31964 CDS YP_001711455.1 170783121 6158354 complement(2975800..2976411) 1 NC_010407.1 hypothetical protein 2976411 6158354 CMS_2822 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711455.1 2975800 R 31964 CDS YP_001711456.1 170783122 6158355 complement(2976529..2978094) 1 NC_010407.1 sugar hydrolase 2978094 6158355 CMS_2823 Clavibacter michiganensis subsp. sepedonicus sugar hydrolase YP_001711456.1 2976529 R 31964 CDS YP_001711457.1 170783123 6158356 2978292..2980001 1 NC_010407.1 sugar hydrolase 2980001 6158356 CMS_2824 Clavibacter michiganensis subsp. sepedonicus sugar hydrolase YP_001711457.1 2978292 D 31964 CDS YP_001711458.1 170783124 6158357 complement(2980033..2980500) 1 NC_010407.1 MarR family transcriptional regulator 2980500 6158357 CMS_2825 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711458.1 2980033 R 31964 CDS YP_001711459.1 170783125 6158358 complement(2980567..2980977) 1 NC_010407.1 hypothetical protein 2980977 6158358 CMS_2826 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711459.1 2980567 R 31964 CDS YP_001711460.1 170783126 6158359 complement(2981133..2982074) 1 NC_010407.1 aldose epimerase 2982074 6158359 CMS_2827 Clavibacter michiganensis subsp. sepedonicus aldose epimerase YP_001711460.1 2981133 R 31964 CDS YP_001711461.1 170783127 6158360 2982114..2982962 1 NC_010407.1 hypothetical protein 2982962 6158360 CMS_2828 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711461.1 2982114 D 31964 CDS YP_001711462.1 170783128 6158361 complement(2983027..2983971) 1 NC_010407.1 hypothetical protein 2983971 6158361 CMS_2829 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711462.1 2983027 R 31964 CDS YP_001711463.1 170783129 6158362 2984099..2985274 1 NC_010407.1 hypothetical protein 2985274 6158362 CMS_2830 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711463.1 2984099 D 31964 CDS YP_001711464.1 170783130 6158363 complement(2985314..2986021) 1 NC_010407.1 hypothetical protein 2986021 6158363 CMS_2831 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711464.1 2985314 R 31964 CDS YP_001711465.1 170783131 6158364 2986042..2987085 1 NC_010407.1 6-phosphofructokinase 2987085 pfkA 6158364 pfkA Clavibacter michiganensis subsp. sepedonicus 6-phosphofructokinase YP_001711465.1 2986042 D 31964 CDS YP_001711466.1 170783132 6158859 2987151..2988176 1 NC_010407.1 alcohol dehydrogenase 2988176 6158859 CMS_2833 Clavibacter michiganensis subsp. sepedonicus alcohol dehydrogenase YP_001711466.1 2987151 D 31964 CDS YP_001711467.1 170783133 6158365 2988270..2988662 1 NC_010407.1 hypothetical protein 2988662 6158365 CMS_2834 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711467.1 2988270 D 31964 CDS YP_001711468.1 170783134 6158366 2988819..2989400 1 NC_010407.1 heme oxygenase 2989400 6158366 CMS_2835 Clavibacter michiganensis subsp. sepedonicus heme oxygenase YP_001711468.1 2988819 D 31964 CDS YP_001711469.1 170783135 6158367 2989582..2990331 1 NC_010407.1 DNA/RNA non-specific endonuclease 2990331 6158367 CMS_2836 Clavibacter michiganensis subsp. sepedonicus DNA/RNA non-specific endonuclease YP_001711469.1 2989582 D 31964 CDS YP_001711470.1 170783136 6158368 2990450..2991289 1 NC_010407.1 good secretion signal; pat-1-like protein 2991289 6158368 CMS_2837 Clavibacter michiganensis subsp. sepedonicus pat-1-like protein YP_001711470.1 2990450 D 31964 CDS YP_001711471.1 170783137 6158369 complement(2991338..2992705) 1 NC_010407.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2992705 hemL 6158369 hemL Clavibacter michiganensis subsp. sepedonicus glutamate-1-semialdehyde aminotransferase YP_001711471.1 2991338 R 31964 CDS YP_001711472.1 170783138 6158746 complement(2992786..2993766) 1 NC_010407.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2993766 hemB 6158746 hemB Clavibacter michiganensis subsp. sepedonicus delta-aminolevulinic acid dehydratase YP_001711472.1 2992786 R 31964 CDS YP_001711473.1 170783139 6158742 complement(2993763..2994602) 1 NC_010407.1 uroporphyrin-III c-methyltransferase/uroporphyrinogen-III synthase 2994602 6158742 CMS_2840 Clavibacter michiganensis subsp. sepedonicus uroporphyrin-III c-methyltransferase/uroporphyrinogen-III synthase YP_001711473.1 2993763 R 31964 CDS YP_001711474.1 170783140 6158370 complement(2994599..2995585) 1 NC_010407.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2995585 hemC 6158370 hemC Clavibacter michiganensis subsp. sepedonicus porphobilinogen deaminase YP_001711474.1 2994599 R 31964 CDS YP_001711475.1 170783141 6158743 complement(2995582..2996736) 1 NC_010407.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 2996736 hemH 6158743 hemH Clavibacter michiganensis subsp. sepedonicus ferrochelatase YP_001711475.1 2995582 R 31964 CDS YP_001711476.1 170783142 6158745 complement(2996832..2998292) 1 NC_010407.1 Weak but full length match to Q6AB01_PROAC; heme synthetase 2998292 6158745 CMS_2843 Clavibacter michiganensis subsp. sepedonicus heme synthetase YP_001711476.1 2996832 R 31964 CDS YP_001711477.1 170783143 6158371 complement(2998324..2999961) 1 NC_010407.1 hypothetical protein 2999961 6158371 CMS_2844 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711477.1 2998324 R 31964 CDS YP_001711478.1 170783144 6158372 complement(2999983..3000258) 1 NC_010407.1 hypothetical protein 3000258 6158372 CMS_2845 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711478.1 2999983 R 31964 CDS YP_001711479.1 170783145 6158373 complement(3000248..3000664) 1 NC_010407.1 hypothetical protein 3000664 6158373 CMS_2846 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711479.1 3000248 R 31964 CDS YP_001711480.1 170783146 6158374 complement(3000697..3001038) 1 NC_010407.1 no signal sequence detected by Prosite; hypothetical protein 3001038 6158374 CMS_2847 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711480.1 3000697 R 31964 CDS YP_001711481.1 170783147 6158375 complement(3001166..3002551) 1 NC_010407.1 protoporphyrinogen oxidase 3002551 hemY 6158375 hemY Clavibacter michiganensis subsp. sepedonicus protoporphyrinogen oxidase YP_001711481.1 3001166 R 31964 CDS YP_001711482.1 170783148 6158748 complement(3002598..3003707) 1 NC_010407.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 3003707 hemE 6158748 hemE Clavibacter michiganensis subsp. sepedonicus uroporphyrinogen decarboxylase YP_001711482.1 3002598 R 31964 CDS YP_001711483.1 170783149 6158744 3003824..3005143 1 NC_010407.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3005143 hemA 6158744 hemA Clavibacter michiganensis subsp. sepedonicus glutamyl-tRNA reductase YP_001711483.1 3003824 D 31964 CDS YP_001711484.1 170783150 6158741 3005140..3005775 1 NC_010407.1 acetyltransferase 3005775 6158741 CMS_2851 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001711484.1 3005140 D 31964 CDS YP_001711485.1 170783151 6158376 3005790..3006395 1 NC_010407.1 acetyltransferase 3006395 6158376 CMS_2852 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001711485.1 3005790 D 31964 CDS YP_001711486.1 170783152 6158377 3006405..3007001 1 NC_010407.1 NUDIX hydrolase 3007001 6158377 CMS_2853 Clavibacter michiganensis subsp. sepedonicus NUDIX hydrolase YP_001711486.1 3006405 D 31964 CDS YP_001711487.1 170783153 6158378 complement(3006932..3007894) 1 NC_010407.1 N/R; insertion element IS1121 transposase 3007894 6158378 CMS_2854 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711487.1 3006932 R 31964 CDS YP_001711488.1 170783154 6158379 complement(3007992..3009110) 1 NC_010407.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 3009110 add 6158379 add Clavibacter michiganensis subsp. sepedonicus adenosine deaminase YP_001711488.1 3007992 R 31964 CDS YP_001711489.1 170783155 6158592 3009213..3010148 1 NC_010407.1 nucleoside hydrolase 3010148 6158592 CMS_2856 Clavibacter michiganensis subsp. sepedonicus nucleoside hydrolase YP_001711489.1 3009213 D 31964 CDS YP_001711490.1 170783156 6158380 complement(3010198..3011496) 1 NC_010407.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 3011496 deoA 6158380 deoA Clavibacter michiganensis subsp. sepedonicus thymidine phosphorylase YP_001711490.1 3010198 R 31964 CDS YP_001711491.1 170783157 6158661 complement(3011493..3011924) 1 NC_010407.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 3011924 6158661 CMS_2858 Clavibacter michiganensis subsp. sepedonicus cytidine deaminase YP_001711491.1 3011493 R 31964 CDS YP_001711492.1 170783158 6158381 complement(3011921..3013222) 1 NC_010407.1 transport protein 3013222 6158381 CMS_2859 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711492.1 3011921 R 31964 CDS YP_001711493.1 170783159 6158382 complement(3013219..3014580) 1 NC_010407.1 transport protein 3014580 6158382 CMS_2860 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711493.1 3013219 R 31964 CDS YP_001711494.1 170783160 6158383 complement(3014577..3016118) 1 NC_010407.1 ABC transporter ATP-binding protein 3016118 6158383 CMS_2861 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711494.1 3014577 R 31964 CDS YP_001711495.1 170783161 6158384 complement(3016200..3017294) 1 NC_010407.1 substrate-binding transport lipoprotein 3017294 6158384 CMS_2862 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport lipoprotein YP_001711495.1 3016200 R 31964 CDS YP_001711496.1 170783162 6158385 complement(3017445..3018521) 1 NC_010407.1 substrate-binding transport lipoprotein 3018521 6158385 CMS_2863 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport lipoprotein YP_001711496.1 3017445 R 31964 CDS YP_001711497.1 170783163 6158386 complement(3018596..3019717) 1 NC_010407.1 mannose-1-phosphate guanylyltransferase 3019717 manC 6158386 manC Clavibacter michiganensis subsp. sepedonicus mannose-1-phosphate guanylyltransferase YP_001711497.1 3018596 R 31964 CDS YP_001711498.1 170783164 6158802 3019835..3021010 1 NC_010407.1 glycosyl transferase 3021010 6158802 CMS_2865 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001711498.1 3019835 D 31964 CDS YP_001711499.1 170783165 6158387 3021241..3021585 1 NC_010407.1 succinate dehydrogenase cytochrome b556 subunit 3021585 sdhC 6158387 sdhC Clavibacter michiganensis subsp. sepedonicus succinate dehydrogenase cytochrome b556 subunit YP_001711499.1 3021241 D 31964 CDS YP_001711500.1 170783166 6158979 3021576..3022052 1 NC_010407.1 succinate dehydrogenase hydrophobic membrane anchor protein 3022052 sdhD 6158979 sdhD Clavibacter michiganensis subsp. sepedonicus succinate dehydrogenase hydrophobic membrane anchor protein YP_001711500.1 3021576 D 31964 CDS YP_001711501.1 170783167 6158980 3022086..3023909 1 NC_010407.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3023909 sdhA 6158980 sdhA Clavibacter michiganensis subsp. sepedonicus succinate dehydrogenase flavoprotein subunit YP_001711501.1 3022086 D 31964 CDS YP_001711502.1 170783168 6158977 3024030..3024728 1 NC_010407.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 3024728 sdhB 6158977 sdhB Clavibacter michiganensis subsp. sepedonicus succinate dehydrogenase iron-sulfur subunit YP_001711502.1 3024030 D 31964 CDS YP_001711503.1 170783169 6158978 complement(3024803..3026458) 1 NC_010407.1 phosphoenolpyruvate-protein phosphotransferase 3026458 ptsI 6158978 ptsI Clavibacter michiganensis subsp. sepedonicus phosphoenolpyruvate-protein phosphotransferase YP_001711503.1 3024803 R 31964 CDS YP_001711504.1 170783170 6158893 3026584..3027708 1 NC_010407.1 hypothetical protein 3027708 6158893 CMS_2871 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711504.1 3026584 D 31964 CDS YP_001711505.1 170783171 6158388 3027719..3028564 1 NC_010407.1 nuclease 3028564 6158388 CMS_2872 Clavibacter michiganensis subsp. sepedonicus nuclease YP_001711505.1 3027719 D 31964 CDS YP_001711506.1 170783172 6158389 3028653..3029666 1 NC_010407.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 3029666 trpS 6158389 trpS Clavibacter michiganensis subsp. sepedonicus tryptophanyl-tRNA synthetase YP_001711506.1 3028653 D 31964 CDS YP_001711507.1 170783173 6159077 3029663..3030469 1 NC_010407.1 hydrolase 3030469 6159077 CMS_2874 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001711507.1 3029663 D 31964 CDS YP_001711508.1 170783174 6158390 complement(3030583..3031674) 1 NC_010407.1 lipoprotein 3031674 6158390 CMS_2875 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711508.1 3030583 R 31964 CDS YP_001711509.1 170783175 6158391 3032162..3033229 1 NC_010407.1 riboflavin biosynthesis protein RibD 3033229 ribD 6158391 ribD Clavibacter michiganensis subsp. sepedonicus riboflavin biosynthesis protein RibD YP_001711509.1 3032162 D 31964 CDS YP_001711510.1 170783176 6158932 3033226..3033900 1 NC_010407.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3033900 ribE 6158932 ribE Clavibacter michiganensis subsp. sepedonicus riboflavin synthase subunit alpha YP_001711510.1 3033226 D 31964 CDS YP_001711511.1 170783177 6158933 3033897..3035258 1 NC_010407.1 riboflavin biosynthesis protein RibA 3035258 ribA 6158933 ribA Clavibacter michiganensis subsp. sepedonicus riboflavin biosynthesis protein RibA YP_001711511.1 3033897 D 31964 CDS YP_001711512.1 170783178 6158931 3035255..3035737 1 NC_010407.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3035737 ribH 6158931 ribH Clavibacter michiganensis subsp. sepedonicus 6,7-dimethyl-8-ribityllumazine synthase YP_001711512.1 3035255 D 31964 CDS YP_001711513.1 170783179 6158935 3035839..3036693 1 NC_010407.1 ABC transporter ATP-binding subunit 3036693 6158935 CMS_2880 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001711513.1 3035839 D 31964 CDS YP_001711514.1 170783180 6158392 3036690..3037547 1 NC_010407.1 ABC transporter ATP-binding subunit 3037547 6158392 CMS_2881 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding subunit YP_001711514.1 3036690 D 31964 CDS YP_001711515.1 170783181 6158393 3037601..3038989 1 NC_010407.1 transport protein 3038989 6158393 CMS_2882 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711515.1 3037601 D 31964 CDS YP_001711516.1 170783182 6158394 3038979..3040538 1 NC_010407.1 substrate-binding transport lipoprotein 3040538 6158394 CMS_2883 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport lipoprotein YP_001711516.1 3038979 D 31964 CDS YP_001711517.1 170783183 6158395 3040538..3042331 1 NC_010407.1 transport protein 3042331 6158395 CMS_2884 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711517.1 3040538 D 31964 CDS YP_001711518.1 170783184 6158396 3042429..3043391 1 NC_010407.1 N/R; insertion element IS1121 transposase 3043391 6158396 CMS_2885 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711518.1 3042429 D 31964 CDS YP_001711519.1 170783185 6158397 complement(3043402..3044331) 1 NC_010407.1 transport protein 3044331 6158397 CMS_2886 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711519.1 3043402 R 31964 CDS YP_001711520.1 170783186 6158398 3044540..3046201 1 NC_010407.1 sortase-sorted surface-anchored protein 3046201 6158398 CMS_2887 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface-anchored protein YP_001711520.1 3044540 D 31964 CDS YP_001711521.1 170783187 6158399 3046366..3047328 1 NC_010407.1 N/C; insertion element IS1121 transposase 3047328 6158399 CMS_2888 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711521.1 3046366 D 31964 CDS YP_001711522.1 170783188 6158400 complement(3047259..3048599) 1 NC_010407.1 hypothetical protein 3048599 6158400 CMS_2889 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711522.1 3047259 R 31964 CDS YP_001711523.1 170783189 6158401 complement(3048596..3048970) 1 NC_010407.1 hypothetical protein 3048970 6158401 CMS_2890 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711523.1 3048596 R 31964 CDS YP_001711524.1 170783190 6158402 complement(3049165..3049623) 1 NC_010407.1 hypothetical protein 3049623 6158402 CMS_2891 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711524.1 3049165 R 31964 CDS YP_001711525.1 170783191 6158403 complement(3049777..3051483) 1 NC_010407.1 transport protein 3051483 6158403 CMS_2892 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711525.1 3049777 R 31964 CDS YP_001711526.1 170783192 6158404 complement(3051480..3052190) 1 NC_010407.1 TetR family transcriptional regulator 3052190 6158404 CMS_2893 Clavibacter michiganensis subsp. sepedonicus TetR family transcriptional regulator YP_001711526.1 3051480 R 31964 CDS YP_001711527.1 170783193 6158405 complement(3052229..3052939) 1 NC_010407.1 hypothetical protein 3052939 6158405 CMS_2894 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711527.1 3052229 R 31964 CDS YP_001711528.1 170783194 6158406 complement(3052942..3053253) 1 NC_010407.1 hypothetical protein 3053253 6158406 CMS_2895 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711528.1 3052942 R 31964 CDS YP_001711529.1 170783195 6158407 complement(3053265..3054482) 1 NC_010407.1 low-affinity inorganic phosphate transporter 3054482 pit 6158407 pit Clavibacter michiganensis subsp. sepedonicus low-affinity inorganic phosphate transporter YP_001711529.1 3053265 R 31964 CDS YP_001711530.1 170783196 6158869 3054610..3055188 1 NC_010407.1 acetyltranferase 3055188 6158869 CMS_2897 Clavibacter michiganensis subsp. sepedonicus acetyltranferase YP_001711530.1 3054610 D 31964 CDS YP_001711531.1 170783197 6158408 3055326..3056747 1 NC_010407.1 hypothetical protein 3056747 6158408 CMS_2898 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711531.1 3055326 D 31964 CDS YP_001711532.1 170783198 6158409 3056744..3057373 1 NC_010407.1 oxidoreductase 3057373 6158409 CMS_2899 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001711532.1 3056744 D 31964 CDS YP_001711533.1 170783199 6158410 3057462..3058367 1 NC_010407.1 hypothetical protein 3058367 6158410 CMS_2900 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711533.1 3057462 D 31964 CDS YP_001711534.1 170783200 6158411 3058373..3058912 1 NC_010407.1 hypothetical protein 3058912 6158411 CMS_2901 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711534.1 3058373 D 31964 CDS YP_001711535.1 170783201 6158412 3058912..3059217 1 NC_010407.1 hypothetical protein 3059217 6158412 CMS_2902 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711535.1 3058912 D 31964 CDS YP_001711536.1 170783202 6158413 complement(3059230..3059589) 1 NC_010407.1 drug resistance dioxygenase 3059589 6158413 CMS_2903 Clavibacter michiganensis subsp. sepedonicus drug resistance dioxygenase YP_001711536.1 3059230 R 31964 CDS YP_001711537.1 170783203 6158414 complement(3059621..3060583) 1 NC_010407.1 Nu; insertion element IS1121 transposase 3060583 6158414 CMS_2904 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711537.1 3059621 R 31964 CDS YP_001711538.1 170783204 6158415 3060885..3062570 1 NC_010407.1 transport protein 3062570 6158415 CMS_2905 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711538.1 3060885 D 31964 CDS YP_001711539.1 170783205 6158416 3062567..3063133 1 NC_010407.1 MarR family transcriptional regulator 3063133 6158416 CMS_2906 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711539.1 3062567 D 31964 CDS YP_001711540.1 170783206 6158417 complement(3063154..3063903) 1 NC_010407.1 hypothetical protein 3063903 6158417 CMS_2907 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711540.1 3063154 R 31964 CDS YP_001711541.1 170783207 6158419 3065098..3066003 1 NC_010407.1 pat-1-like protein 3066003 6158419 CMS_2909 Clavibacter michiganensis subsp. sepedonicus pat-1-like protein YP_001711541.1 3065098 D 31964 CDS YP_001711542.1 170783208 6158420 complement(3066591..3068555) 1 NC_010407.1 surface-anchored protein 3068555 6158420 CMS_2910 Clavibacter michiganensis subsp. sepedonicus surface-anchored protein YP_001711542.1 3066591 R 31964 CDS YP_001711543.1 170783209 6158421 3068826..3071936 1 NC_010407.1 surface-anchored protein 3071936 6158421 CMS_2911 Clavibacter michiganensis subsp. sepedonicus surface-anchored protein YP_001711543.1 3068826 D 31964 CDS YP_001711544.1 170783210 6158422 3072103..3073911 1 NC_010407.1 surface-anchored protein 3073911 6158422 CMS_2912 Clavibacter michiganensis subsp. sepedonicus surface-anchored protein YP_001711544.1 3072103 D 31964 CDS YP_001711545.1 170783211 6158423 3074005..3074751 1 NC_010407.1 surface-anchored protein 3074751 6158423 CMS_2913 Clavibacter michiganensis subsp. sepedonicus surface-anchored protein YP_001711545.1 3074005 D 31964 CDS YP_001711546.1 170783212 6158424 3074859..3077111 1 NC_010407.1 surface-anchored protein 3077111 6158424 CMS_2914 Clavibacter michiganensis subsp. sepedonicus surface-anchored protein YP_001711546.1 3074859 D 31964 CDS YP_001711547.1 170783213 6158426 complement(3077678..3080116) 1 NC_010407.1 phosphoketolase 3080116 6158426 CMS_2915 Clavibacter michiganensis subsp. sepedonicus phosphoketolase YP_001711547.1 3077678 R 31964 CDS YP_001711548.1 170783214 6158427 3080964..3081287 1 NC_010407.1 hypothetical protein 3081287 6158427 CMS_2917 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711548.1 3080964 D 31964 CDS YP_001711549.1 170783215 6158428 3081387..3082679 1 NC_010407.1 N/I/C ISLxx5; insertion element ISCmi3 transposase 3082679 6158428 CMS_2918 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi3 transposase YP_001711549.1 3081387 D 31964 CDS YP_001711550.1 170783216 6158429 complement(3082754..3083632) 1 NC_010407.1 hypothetical protein 3083632 6158429 CMS_2919 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711550.1 3082754 R 31964 CDS YP_001711551.1 170783217 6158430 complement(3083764..3084201) 1 NC_010407.1 MarR family transcriptional regulator 3084201 6158430 CMS_2920 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711551.1 3083764 R 31964 CDS YP_001711552.1 170783218 6158431 3084396..3086378 1 NC_010407.1 hypothetical protein 3086378 6158431 CMS_2921 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711552.1 3084396 D 31964 CDS YP_001711553.1 170783219 6158433 3087417..3087956 1 NC_010407.1 hydrolase 3087956 6158433 CMS_2923 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001711553.1 3087417 D 31964 CDS YP_001711554.1 170783220 6158434 complement(3087965..3088690) 1 NC_010407.1 hypothetical protein 3088690 6158434 CMS_2924 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711554.1 3087965 R 31964 CDS YP_001711555.1 170783221 6158435 complement(3088764..3089882) 1 NC_010407.1 L-alanine dehydrogenase 3089882 ald 6158435 ald Clavibacter michiganensis subsp. sepedonicus L-alanine dehydrogenase YP_001711555.1 3088764 R 31964 CDS YP_001711556.1 170783222 6158593 3090050..3090544 1 NC_010407.1 AsnC family transcriptional regulator 3090544 6158593 CMS_2926 Clavibacter michiganensis subsp. sepedonicus AsnC family transcriptional regulator YP_001711556.1 3090050 D 31964 CDS YP_001711557.1 170783223 6158436 3090642..3091604 1 NC_010407.1 N/R; insertion element ISCmi2 transposase 3091604 6158436 CMS_2927 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001711557.1 3090642 D 31964 CDS YP_001711558.1 170783224 6158437 complement(3091601..3092104) 1 NC_010407.1 acetyltransferase 3092104 6158437 CMS_2928 Clavibacter michiganensis subsp. sepedonicus acetyltransferase YP_001711558.1 3091601 R 31964 CDS YP_001711559.1 170783225 6158438 complement(3092227..3092766) 1 NC_010407.1 hypothetical protein 3092766 6158438 CMS_2929 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711559.1 3092227 R 31964 CDS YP_001711560.1 170783226 6158439 complement(3092776..3093750) 1 NC_010407.1 AraC family transcriptional regulator 3093750 6158439 CMS_2930 Clavibacter michiganensis subsp. sepedonicus AraC family transcriptional regulator YP_001711560.1 3092776 R 31964 CDS YP_001711561.1 170783227 6158440 3093865..3094590 1 NC_010407.1 short chain oxidoreductase 3094590 6158440 CMS_2931 Clavibacter michiganensis subsp. sepedonicus short chain oxidoreductase YP_001711561.1 3093865 D 31964 CDS YP_001711562.1 170783228 6158441 complement(3094607..3094798) 1 NC_010407.1 hypothetical protein 3094798 6158441 CMS_2932 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711562.1 3094607 R 31964 CDS YP_001711563.1 170783229 6158442 3094973..3095488 1 NC_010407.1 hypothetical protein 3095488 6158442 CMS_2933 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711563.1 3094973 D 31964 CDS YP_001711564.1 170783230 6158443 3095494..3096423 1 NC_010407.1 hypothetical protein 3096423 6158443 CMS_2934 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711564.1 3095494 D 31964 CDS YP_001711565.1 170783231 6158444 3096447..3097307 1 NC_010407.1 oxidoreductase 3097307 6158444 CMS_2935 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001711565.1 3096447 D 31964 CDS YP_001711566.1 170783232 6158445 complement(3097348..3098676) 1 NC_010407.1 multi anti extrusion protein 3098676 6158445 CMS_2936 Clavibacter michiganensis subsp. sepedonicus multi anti extrusion protein YP_001711566.1 3097348 R 31964 CDS YP_001711567.1 170783233 6158446 complement(3098781..3100613) 1 NC_010407.1 hypothetical protein 3100613 6158446 CMS_2937 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711567.1 3098781 R 31964 CDS YP_001711568.1 170783234 6158447 3100911..3101606 1 NC_010407.1 hypothetical protein 3101606 6158447 CMS_2938 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711568.1 3100911 D 31964 CDS YP_001711569.1 170783235 6158448 3101626..3102312 1 NC_010407.1 hypothetical protein 3102312 6158448 CMS_2939 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711569.1 3101626 D 31964 CDS YP_001711570.1 170783236 6158449 3102302..3103102 1 NC_010407.1 sortase-sorted surface-anchored protein 3103102 6158449 CMS_2940 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface-anchored protein YP_001711570.1 3102302 D 31964 CDS YP_001711571.1 170783237 6158450 3103099..3104982 1 NC_010407.1 hypothetical protein 3104982 6158450 CMS_2941 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711571.1 3103099 D 31964 CDS YP_001711572.1 170783238 6158451 3105006..3105497 1 NC_010407.1 MarR family transcriptional regulator 3105497 6158451 CMS_2942 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711572.1 3105006 D 31964 CDS YP_001711573.1 170783239 6158452 complement(3105535..3106308) 1 NC_010407.1 transport protein 3106308 6158452 CMS_2943 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711573.1 3105535 R 31964 CDS YP_001711574.1 170783240 6158453 complement(3106328..3106933) 1 NC_010407.1 hypothetical protein 3106933 6158453 CMS_2944 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711574.1 3106328 R 31964 CDS YP_001711575.1 170783241 6158454 complement(3106972..3107325) 1 NC_010407.1 hypothetical protein 3107325 6158454 CMS_2945 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711575.1 3106972 R 31964 CDS YP_001711576.1 170783242 6158455 complement(3107487..3109601) 1 NC_010407.1 hypothetical protein 3109601 6158455 CMS_2946 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711576.1 3107487 R 31964 CDS YP_001711577.1 170783243 6158456 3109755..3110507 1 NC_010407.1 cyclohexanol dehydrogenase 3110507 6158456 CMS_2947 Clavibacter michiganensis subsp. sepedonicus cyclohexanol dehydrogenase YP_001711577.1 3109755 D 31964 CDS YP_001711578.1 170783244 6158457 complement(3110632..3110925) 1 NC_010407.1 secondary metabolism monooxygenase 3110925 6158457 CMS_2948 Clavibacter michiganensis subsp. sepedonicus secondary metabolism monooxygenase YP_001711578.1 3110632 R 31964 CDS YP_001711579.1 170783245 6158458 complement(3110922..3111740) 1 NC_010407.1 ABC transporter ATP-binding protein 3111740 6158458 CMS_2949 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711579.1 3110922 R 31964 CDS YP_001711580.1 170783246 6158459 complement(3111716..3112780) 1 NC_010407.1 sugar transport integral membrane protein 3112780 6158459 CMS_2950 Clavibacter michiganensis subsp. sepedonicus sugar transport integral membrane protein YP_001711580.1 3111716 R 31964 CDS YP_001711581.1 170783247 6158460 complement(3112765..3113865) 1 NC_010407.1 substrate-binding transport lipoprotein 3113865 6158460 CMS_2951 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport lipoprotein YP_001711581.1 3112765 R 31964 CDS YP_001711582.1 170783248 6158461 3113979..3115031 1 NC_010407.1 LacI family transcriptional regulator 3115031 6158461 CMS_2952 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001711582.1 3113979 D 31964 CDS YP_001711583.1 170783249 6158462 3115024..3115914 1 NC_010407.1 carbohydrate kinase 3115914 6158462 CMS_2953 Clavibacter michiganensis subsp. sepedonicus carbohydrate kinase YP_001711583.1 3115024 D 31964 CDS YP_001711584.1 170783250 6158463 3116322..3116735 1 NC_010407.1 hypothetical protein 3116735 6158463 CMS_2954 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711584.1 3116322 D 31964 CDS YP_001711585.1 170783251 6158464 3116751..3117209 1 NC_010407.1 DNA-binding protein 3117209 6158464 CMS_2955 Clavibacter michiganensis subsp. sepedonicus DNA-binding protein YP_001711585.1 3116751 D 31964 CDS YP_001711586.1 170783252 6158465 3117229..3117735 1 NC_010407.1 hypothetical protein 3117735 6158465 CMS_2956 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711586.1 3117229 D 31964 CDS YP_001711587.1 170783253 6158466 3117848..3118879 1 NC_010407.1 hypothetical protein 3118879 6158466 CMS_2957 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711587.1 3117848 D 31964 CDS YP_001711588.1 170783254 6158467 complement(3118909..3119631) 1 NC_010407.1 Appears to be a fusion relative to S. coelicolor and others.; hypothetical protein 3119631 6158467 CMS_2958 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711588.1 3118909 R 31964 CDS YP_001711589.1 170783255 6158468 complement(3119628..3120671) 1 NC_010407.1 hypothetical protein 3120671 6158468 CMS_2959 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711589.1 3119628 R 31964 CDS YP_001711590.1 170783256 6158469 3120737..3121633 1 NC_010407.1 LysR family transcriptional regulator 3121633 6158469 CMS_2960 Clavibacter michiganensis subsp. sepedonicus LysR family transcriptional regulator YP_001711590.1 3120737 D 31964 CDS YP_001711591.1 170783257 6158470 3121767..3122417 1 NC_010407.1 hypothetical protein 3122417 6158470 CMS_2961 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711591.1 3121767 D 31964 CDS YP_001711592.1 170783258 6158471 complement(3122433..3123287) 1 NC_010407.1 hypothetical protein 3123287 6158471 CMS_2962 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711592.1 3122433 R 31964 CDS YP_001711593.1 170783259 6158472 complement(3123281..3124030) 1 NC_010407.1 hypothetical protein 3124030 6158472 CMS_2963 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711593.1 3123281 R 31964 CDS YP_001711594.1 170783260 6158473 complement(3124027..3124848) 1 NC_010407.1 antibiotic processing protein 3124848 6158473 CMS_2964 Clavibacter michiganensis subsp. sepedonicus antibiotic processing protein YP_001711594.1 3124027 R 31964 CDS YP_001711595.1 170783261 6158474 complement(3124859..3125908) 1 NC_010407.1 hypothetical protein 3125908 6158474 CMS_2965 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711595.1 3124859 R 31964 CDS YP_001711596.1 170783262 6158476 complement(3127179..3127907) 1 NC_010407.1 hydroxylase 3127907 6158476 CMS_2967 Clavibacter michiganensis subsp. sepedonicus hydroxylase YP_001711596.1 3127179 R 31964 CDS YP_001711597.1 170783263 6158477 complement(3127904..3128671) 1 NC_010407.1 transport protein 3128671 6158477 CMS_2968 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711597.1 3127904 R 31964 CDS YP_001711598.1 170783264 6158478 complement(3128668..3129540) 1 NC_010407.1 ABC transporter ATP-binding protein 3129540 6158478 CMS_2969 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711598.1 3128668 R 31964 CDS YP_001711599.1 170783265 6158479 complement(3130332..3131198) 1 NC_010407.1 oxidoreductase 3131198 6158479 CMS_2970 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001711599.1 3130332 R 31964 CDS YP_001711600.1 170783266 6158480 complement(3131319..3132590) 1 NC_010407.1 transport protein 3132590 6158480 CMS_2971 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711600.1 3131319 R 31964 CDS YP_001711601.1 170783267 6158481 complement(3132683..3133159) 1 NC_010407.1 hypothetical protein 3133159 6158481 CMS_2972 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711601.1 3132683 R 31964 CDS YP_001711602.1 170783268 6158482 3133178..3134041 1 NC_010407.1 hypothetical protein 3134041 6158482 CMS_2973 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711602.1 3133178 D 31964 CDS YP_001711603.1 170783269 6158483 complement(3134105..3135010) 1 NC_010407.1 converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase 3135010 mmuM 6158483 mmuM Clavibacter michiganensis subsp. sepedonicus homocysteine methyltransferase YP_001711603.1 3134105 R 31964 CDS YP_001711604.1 170783270 6158814 3135160..3135693 1 NC_010407.1 MarR family transcriptional regulator 3135693 6158814 CMS_2975 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711604.1 3135160 D 31964 CDS YP_001711605.1 170783271 6158484 3135732..3136430 1 NC_010407.1 hydrolase 3136430 6158484 CMS_2976 Clavibacter michiganensis subsp. sepedonicus hydrolase YP_001711605.1 3135732 D 31964 CDS YP_001711606.1 170783272 6158486 3136917..3137435 1 NC_010407.1 hypothetical protein 3137435 6158486 CMS_2978 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711606.1 3136917 D 31964 CDS YP_001711607.1 170783273 6158487 3137472..3137945 1 NC_010407.1 hypothetical protein 3137945 6158487 CMS_2979 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711607.1 3137472 D 31964 CDS YP_001711608.1 170783274 6158488 3138151..3138393 1 NC_010407.1 hypothetical protein 3138393 6158488 CMS_2980 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711608.1 3138151 D 31964 CDS YP_001711609.1 170783275 6158489 3138459..3138995 1 NC_010407.1 hypothetical protein 3138995 6158489 CMS_2981 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711609.1 3138459 D 31964 CDS YP_001711610.1 170783276 6158490 complement(3139077..3139412) 1 NC_010407.1 in mycobacterium a dominant t-cell antigen and stimulates lymphoproliferation (by similarity).; Lsr2-like protein 3139412 6158490 CMS_2982 Clavibacter michiganensis subsp. sepedonicus Lsr2-like protein YP_001711610.1 3139077 R 31964 CDS YP_001711611.1 170783277 6158491 3139569..3139958 1 NC_010407.1 hypothetical protein 3139958 6158491 CMS_2983 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711611.1 3139569 D 31964 CDS YP_001711612.1 170783278 6158492 3140134..3140850 1 NC_010407.1 hypothetical protein 3140850 6158492 CMS_2984 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711612.1 3140134 D 31964 CDS YP_001711613.1 170783279 6158493 complement(3140940..3141311) 1 NC_010407.1 hypothetical protein 3141311 6158493 CMS_2985 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711613.1 3140940 R 31964 CDS YP_001711614.1 170783280 6158494 3141677..3142288 1 NC_010407.1 hypothetical protein 3142288 6158494 CMS_2986 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711614.1 3141677 D 31964 CDS YP_001711615.1 170783281 6158495 complement(3142302..3142793) 1 NC_010407.1 hypothetical protein 3142793 6158495 CMS_2987 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711615.1 3142302 R 31964 CDS YP_001711616.1 170783282 6158496 complement(3143069..3143590) 1 NC_010407.1 DNA invertase 3143590 6158496 CMS_2988 Clavibacter michiganensis subsp. sepedonicus DNA invertase YP_001711616.1 3143069 R 31964 CDS YP_001711617.1 170783283 6158497 3144148..3144990 1 NC_010407.1 in an low GC region; pat-1-like protein 3144990 6158497 CMS_2989 Clavibacter michiganensis subsp. sepedonicus pat-1-like protein YP_001711617.1 3144148 D 31964 CDS YP_001711618.1 170783284 6158498 complement(3145443..3145763) 1 NC_010407.1 hypothetical protein 3145763 6158498 CMS_2990 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711618.1 3145443 R 31964 CDS YP_001711619.1 170783285 6158499 complement(3145967..3146989) 1 NC_010407.1 in a generally atypical region, low GC; pat-1-like protein 3146989 6158499 CMS_2991 Clavibacter michiganensis subsp. sepedonicus pat-1-like protein YP_001711619.1 3145967 R 31964 CDS YP_001711620.1 170783286 6158500 complement(3147346..3147771) 1 NC_010407.1 hypothetical protein 3147771 6158500 CMS_2993 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711620.1 3147346 R 31964 CDS YP_001711621.1 170783287 6158501 complement(3147933..3148604) 1 NC_010407.1 GntR family transcriptional regulator 3148604 6158501 CMS_2994 Clavibacter michiganensis subsp. sepedonicus GntR family transcriptional regulator YP_001711621.1 3147933 R 31964 CDS YP_001711622.1 170783288 6158502 3148752..3150128 1 NC_010407.1 nucleotide transporter 3150128 6158502 CMS_2995 Clavibacter michiganensis subsp. sepedonicus nucleotide transporter YP_001711622.1 3148752 D 31964 CDS YP_001711623.1 170783289 6158503 3150125..3150856 1 NC_010407.1 isochorismatase hydrolase 3150856 6158503 CMS_2996 Clavibacter michiganensis subsp. sepedonicus isochorismatase hydrolase YP_001711623.1 3150125 D 31964 CDS YP_001711624.1 170783290 6158505 complement(3152400..3153641) 1 NC_010407.1 nucleotide permease 3153641 6158505 CMS_2998 Clavibacter michiganensis subsp. sepedonicus nucleotide permease YP_001711624.1 3152400 R 31964 CDS YP_001711625.1 170783291 6158506 3153928..3154890 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 3154890 6158506 CMS_2999 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711625.1 3153928 D 31964 CDS YP_001711626.1 170783292 6158507 complement(3154901..3155863) 1 NC_010407.1 N/R; insertion element ISCmi2 transposase 3155863 6158507 CMS_3000 Clavibacter michiganensis subsp. sepedonicus insertion element ISCmi2 transposase YP_001711626.1 3154901 R 31964 CDS YP_001711627.1 170783293 6158508 complement(3155961..3156806) 1 NC_010407.1 peptidase 3156806 6158508 CMS_3001 Clavibacter michiganensis subsp. sepedonicus peptidase YP_001711627.1 3155961 R 31964 CDS YP_001711628.1 170783294 6158509 3156970..3157428 1 NC_010407.1 hypothetical protein 3157428 6158509 CMS_3002 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711628.1 3156970 D 31964 CDS YP_001711629.1 170783295 6158510 complement(3157489..3158298) 1 NC_010407.1 inositol monophosphatase 3158298 suhB 6158510 suhB Clavibacter michiganensis subsp. sepedonicus inositol monophosphatase YP_001711629.1 3157489 R 31964 CDS YP_001711630.1 170783296 6159003 complement(3158343..3159086) 1 NC_010407.1 hypothetical protein 3159086 6159003 CMS_3004 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711630.1 3158343 R 31964 CDS YP_001711631.1 170783297 6158511 complement(3159140..3160126) 1 NC_010407.1 exported oxidoreductase 3160126 6158511 CMS_3005 Clavibacter michiganensis subsp. sepedonicus exported oxidoreductase YP_001711631.1 3159140 R 31964 CDS YP_001711632.1 170783298 6159067 3160445..3160942 1 NC_010407.1 hypothetical protein 3160942 6159067 CMS_3006 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711632.1 3160445 D 31964 CDS YP_001711633.1 170783299 6158513 3161048..3162505 1 NC_010407.1 cardiolipin synthetase 3162505 cls 6158513 cls Clavibacter michiganensis subsp. sepedonicus cardiolipin synthetase YP_001711633.1 3161048 D 31964 CDS YP_001711634.1 170783300 6158636 complement(3162579..3163172) 1 NC_010407.1 MarR family transcriptional regulator 3163172 6158636 CMS_3008 Clavibacter michiganensis subsp. sepedonicus MarR family transcriptional regulator YP_001711634.1 3162579 R 31964 CDS YP_001711635.1 170783301 6158514 complement(3163203..3163829) 1 NC_010407.1 type IV leader peptidase 3163829 6158514 CMS_3009 Clavibacter michiganensis subsp. sepedonicus type IV leader peptidase YP_001711635.1 3163203 R 31964 CDS YP_001711636.1 170783302 6158515 complement(3163962..3165332) 1 NC_010407.1 NADPH-ferredoxin reductase 3165332 fprA 6158515 fprA Clavibacter michiganensis subsp. sepedonicus NADPH-ferredoxin reductase YP_001711636.1 3163962 R 31964 CDS YP_001711637.1 170783303 6158692 complement(3165424..3166401) 1 NC_010407.1 polyprenyl diphosphate synthase 3166401 6158692 CMS_3011 Clavibacter michiganensis subsp. sepedonicus polyprenyl diphosphate synthase YP_001711637.1 3165424 R 31964 CDS YP_001711638.1 170783304 6158516 complement(3166533..3167270) 1 NC_010407.1 menaquinone biosynthesis methyltransferase 3167270 ubiE 6158516 ubiE Clavibacter michiganensis subsp. sepedonicus menaquinone biosynthesis methyltransferase YP_001711638.1 3166533 R 31964 CDS YP_001711639.1 170783305 6159084 3167428..3168702 1 NC_010407.1 menaquinone-specific isochorismate synthase 3168702 menF 6159084 menF Clavibacter michiganensis subsp. sepedonicus menaquinone-specific isochorismate synthase YP_001711639.1 3167428 D 31964 CDS YP_001711640.1 170783306 6158809 complement(3168699..3169928) 1 NC_010407.1 integral membrane transport protein 3169928 6158809 CMS_3014 Clavibacter michiganensis subsp. sepedonicus integral membrane transport protein YP_001711640.1 3168699 R 31964 CDS YP_001711641.1 170783307 6158517 complement(3169925..3170491) 1 NC_010407.1 ArsR family transcriptional regulator 3170491 6158517 CMS_3015 Clavibacter michiganensis subsp. sepedonicus ArsR family transcriptional regulator YP_001711641.1 3169925 R 31964 CDS YP_001711642.1 170783308 6158518 3170538..3171308 1 NC_010407.1 tyrosine-protein phosphatase 3171308 6158518 CMS_3016 Clavibacter michiganensis subsp. sepedonicus tyrosine-protein phosphatase YP_001711642.1 3170538 D 31964 CDS YP_001711643.1 170783309 6158519 complement(3171342..3173111) 1 NC_010407.1 menaquinone biosynthesis protein MenD 3173111 menD 6158519 menD Clavibacter michiganensis subsp. sepedonicus menaquinone biosynthesis protein MenD YP_001711643.1 3171342 R 31964 CDS YP_001711644.1 170783310 6158807 complement(3173116..3173550) 1 NC_010407.1 hypothetical protein 3173550 6158807 CMS_3018 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711644.1 3173116 R 31964 CDS YP_001711645.1 170783311 6158520 3173690..3174076 1 NC_010407.1 hypothetical protein 3174076 6158520 CMS_3019 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711645.1 3173690 D 31964 CDS YP_001711646.1 170783312 6158521 complement(3174087..3174464) 1 NC_010407.1 hypothetical protein 3174464 6158521 CMS_3020 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711646.1 3174087 R 31964 CDS YP_001711647.1 170783313 6158522 complement(3174470..3175354) 1 NC_010407.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3175354 menA 6158522 menA Clavibacter michiganensis subsp. sepedonicus 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001711647.1 3174470 R 31964 CDS YP_001711648.1 170783314 6158804 complement(3175561..3176313) 1 NC_010407.1 phosphoglycerate mutase 3176313 6158804 CMS_3022 Clavibacter michiganensis subsp. sepedonicus phosphoglycerate mutase YP_001711648.1 3175561 R 31964 CDS YP_001711649.1 170783315 6158523 complement(3176413..3177321) 1 NC_010407.1 beta-lactamase 3177321 6158523 CMS_3023 Clavibacter michiganensis subsp. sepedonicus beta-lactamase YP_001711649.1 3176413 R 31964 CDS YP_001711650.1 170783316 6158524 complement(3177333..3179315) 1 NC_010407.1 metallopeptidase 3179315 6158524 CMS_3024 Clavibacter michiganensis subsp. sepedonicus metallopeptidase YP_001711650.1 3177333 R 31964 CDS YP_001711651.1 170783317 6158525 complement(3179340..3180302) 1 NC_010407.1 Nu/R; insertion element IS1121 transposase 3180302 6158525 CMS_3025 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711651.1 3179340 R 31964 CDS YP_001711652.1 170783318 6158527 3180656..3180772 1 NC_010407.1 hypothetical protein 3180772 6158527 CMS_3027 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711652.1 3180656 D 31964 CDS YP_001711653.1 170783319 6158528 complement(3180782..3181174) 1 NC_010407.1 hypothetical protein 3181174 6158528 CMS_3028 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711653.1 3180782 R 31964 CDS YP_001711654.1 170783320 6158529 complement(3181183..3181671) 1 NC_010407.1 hypothetical protein 3181671 6158529 CMS_3029 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711654.1 3181183 R 31964 CDS YP_001711655.1 170783321 6158530 complement(3181865..3182470) 1 NC_010407.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 3182470 dcd 6158530 dcd Clavibacter michiganensis subsp. sepedonicus deoxycytidine triphosphate deaminase YP_001711655.1 3181865 R 31964 CDS YP_001711656.1 170783322 6159041 3182780..3183847 1 NC_010407.1 hypothetical protein 3183847 6159041 CMS_3031 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711656.1 3182780 D 31964 CDS YP_001711657.1 170783323 6158531 complement(3183844..3185292) 1 NC_010407.1 restriction-modification system methyltransferase 3185292 6158531 CMS_3032 Clavibacter michiganensis subsp. sepedonicus restriction-modification system methyltransferase YP_001711657.1 3183844 R 31964 CDS YP_001711658.1 170783324 6158532 3185397..3186572 1 NC_010407.1 restriction-modification system methyltransferase 3186572 6158532 CMS_3033 Clavibacter michiganensis subsp. sepedonicus restriction-modification system methyltransferase YP_001711658.1 3185397 D 31964 CDS YP_001711659.1 170783325 6158533 complement(3186609..3187364) 1 NC_010407.1 transcriptional regulator 3187364 6158533 CMS_3034 Clavibacter michiganensis subsp. sepedonicus transcriptional regulator YP_001711659.1 3186609 R 31964 CDS YP_001711660.1 170783326 6158534 3187392..3188792 1 NC_010407.1 gluconate permease 3188792 gntP 6158534 gntP Clavibacter michiganensis subsp. sepedonicus gluconate permease YP_001711660.1 3187392 D 31964 CDS YP_001711661.1 170783327 6158733 3188890..3189852 1 NC_010407.1 N/I/C associated with genes for sugar transport which could be another remnant of the Cmm patho island; insertion element IS1121 transposase 3189852 6158733 CMS_3036 Clavibacter michiganensis subsp. sepedonicus insertion element IS1121 transposase YP_001711661.1 3188890 D 31964 CDS YP_001711662.1 170783328 6158535 complement(3189896..3190924) 1 NC_010407.1 LacI family transcriptional regulator 3190924 6158535 CMS_3037 Clavibacter michiganensis subsp. sepedonicus LacI family transcriptional regulator YP_001711662.1 3189896 R 31964 CDS YP_001711663.1 170783329 6158536 complement(3190981..3191904) 1 NC_010407.1 sugar transport integral membrane protein 3191904 6158536 CMS_3038 Clavibacter michiganensis subsp. sepedonicus sugar transport integral membrane protein YP_001711663.1 3190981 R 31964 CDS YP_001711664.1 170783330 6158537 complement(3191901..3193007) 1 NC_010407.1 sugar transport integral membrane protein 3193007 6158537 CMS_3039 Clavibacter michiganensis subsp. sepedonicus sugar transport integral membrane protein YP_001711664.1 3191901 R 31964 CDS YP_001711665.1 170783331 6158538 complement(3193095..3194414) 1 NC_010407.1 sugar-binding transport lipoprotein 3194414 6158538 CMS_3040 Clavibacter michiganensis subsp. sepedonicus sugar-binding transport lipoprotein YP_001711665.1 3193095 R 31964 CDS YP_001711666.1 170783332 6158539 3194576..3195592 1 NC_010407.1 oxidoreductase 3195592 6158539 CMS_3041 Clavibacter michiganensis subsp. sepedonicus oxidoreductase YP_001711666.1 3194576 D 31964 CDS YP_001711667.1 170783333 6158540 3195729..3196280 1 NC_010407.1 exported oxidoreductase 3196280 6158540 CMS_3042 Clavibacter michiganensis subsp. sepedonicus exported oxidoreductase YP_001711667.1 3195729 D 31964 CDS YP_001711668.1 170783334 6158687 complement(3197937..3198263) 1 NC_010407.1 hypothetical protein 3198263 6158687 CMS_3046 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711668.1 3197937 R 31964 CDS YP_001711669.1 170783335 6158542 complement(3198402..3198725) 1 NC_010407.1 hypothetical protein 3198725 6158542 CMS_3047 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711669.1 3198402 R 31964 CDS YP_001711670.1 170783336 6158543 3199055..3199939 1 NC_010407.1 manganese catalase 3199939 6158543 CMS_3048 Clavibacter michiganensis subsp. sepedonicus manganese catalase YP_001711670.1 3199055 D 31964 CDS YP_001711671.1 170783337 6158544 3200045..3200824 1 NC_010407.1 beta-lactamase 3200824 6158544 CMS_3049 Clavibacter michiganensis subsp. sepedonicus beta-lactamase YP_001711671.1 3200045 D 31964 CDS YP_001711672.1 170783338 6158545 3200821..3201558 1 NC_010407.1 phosphoglycerate mutase 3201558 6158545 CMS_3050 Clavibacter michiganensis subsp. sepedonicus phosphoglycerate mutase YP_001711672.1 3200821 D 31964 CDS YP_001711673.1 170783339 6158546 3201542..3202435 1 NC_010407.1 hypothetical protein 3202435 6158546 CMS_3051 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711673.1 3201542 D 31964 CDS YP_001711674.1 170783340 6158547 3202528..3202731 1 NC_010407.1 hypothetical protein 3202731 6158547 CMS_3052 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711674.1 3202528 D 31964 CDS YP_001711675.1 170783341 6158548 complement(3202753..3202968) 1 NC_010407.1 hypothetical protein 3202968 6158548 CMS_3053 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711675.1 3202753 R 31964 CDS YP_001711676.1 170783342 6158549 3203069..3203791 1 NC_010407.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3203791 deoC 6158549 deoC Clavibacter michiganensis subsp. sepedonicus deoxyribose-phosphate aldolase YP_001711676.1 3203069 D 31964 CDS YP_001711677.1 170783343 6158662 3203791..3205086 1 NC_010407.1 catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 3205086 6158662 CMS_3055 Clavibacter michiganensis subsp. sepedonicus aminopeptidase 2 YP_001711677.1 3203791 D 31964 CDS YP_001711678.1 170783344 6158550 complement(3205195..3205908) 1 NC_010407.1 lipoprotein 3205908 6158550 CMS_3056 Clavibacter michiganensis subsp. sepedonicus lipoprotein YP_001711678.1 3205195 R 31964 CDS YP_001711679.1 170783345 6158551 3205964..3206617 1 NC_010407.1 carboxymethylenebutenolidase 3206617 6158551 CMS_3057 Clavibacter michiganensis subsp. sepedonicus carboxymethylenebutenolidase YP_001711679.1 3205964 D 31964 CDS YP_001711680.1 170783346 6158552 3206715..3207134 1 NC_010407.1 hypothetical protein 3207134 6158552 CMS_3058 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711680.1 3206715 D 31964 CDS YP_001711681.1 170783347 6158553 3207258..3207959 1 NC_010407.1 hypothetical protein 3207959 6158553 CMS_3059 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711681.1 3207258 D 31964 CDS YP_001711682.1 170783348 6158554 complement(3207994..3209295) 1 NC_010407.1 helicase 3209295 6158554 CMS_3060 Clavibacter michiganensis subsp. sepedonicus helicase YP_001711682.1 3207994 R 31964 CDS YP_001711683.1 170783349 6158555 3209429..3210448 1 NC_010407.1 hypothetical protein 3210448 6158555 CMS_3061 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711683.1 3209429 D 31964 CDS YP_001711684.1 170783350 6158556 3210564..3210986 1 NC_010407.1 hypothetical protein 3210986 6158556 CMS_3062 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711684.1 3210564 D 31964 CDS YP_001711685.1 170783351 6158557 complement(3211010..3211873) 1 NC_010407.1 iron-siderophore uptake system ATP-binding component 3211873 6158557 CMS_3063 Clavibacter michiganensis subsp. sepedonicus iron-siderophore uptake system ATP-binding component YP_001711685.1 3211010 R 31964 CDS YP_001711686.1 170783352 6158558 complement(3211893..3212957) 1 NC_010407.1 iron-siderophore uptake system transmembrane component 3212957 6158558 CMS_3064 Clavibacter michiganensis subsp. sepedonicus iron-siderophore uptake system transmembrane component YP_001711686.1 3211893 R 31964 CDS YP_001711687.1 170783353 6158559 complement(3212954..3214012) 1 NC_010407.1 iron-siderophore uptake system transmembrane component 3214012 6158559 CMS_3065 Clavibacter michiganensis subsp. sepedonicus iron-siderophore uptake system transmembrane component YP_001711687.1 3212954 R 31964 CDS YP_001711688.1 170783354 6158560 3214115..3215119 1 NC_010407.1 iron-siderophore binding lipoprotein 3215119 6158560 CMS_3066 Clavibacter michiganensis subsp. sepedonicus iron-siderophore binding lipoprotein YP_001711688.1 3214115 D 31964 CDS YP_001711689.1 170783355 6158561 3215293..3215805 1 NC_010407.1 hypothetical protein 3215805 6158561 CMS_3067 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711689.1 3215293 D 31964 CDS YP_001711690.1 170783356 6158562 complement(3215834..3217690) 1 NC_010407.1 transport protein 3217690 6158562 CMS_3068 Clavibacter michiganensis subsp. sepedonicus transport protein YP_001711690.1 3215834 R 31964 CDS YP_001711691.1 170783357 6158563 complement(3217946..3218233) 1 NC_010407.1 DNA-binding protein HU 3218233 hup 6158563 hup Clavibacter michiganensis subsp. sepedonicus DNA-binding protein HU YP_001711691.1 3217946 R 31964 CDS YP_001711692.1 170783358 6158762 complement(3218365..3218670) 1 NC_010407.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 3218670 rpsN 6158762 rpsN Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S14 YP_001711692.1 3218365 R 31964 CDS YP_001711693.1 170783359 6158967 complement(3218673..3218840) 1 NC_010407.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3218840 rpmG 6158967 rpmG Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L33 YP_001711693.1 3218673 R 31964 CDS YP_001711694.1 170783360 6158959 complement(3218840..3219076) 1 NC_010407.1 required for 70S ribosome assembly; 50S ribosomal protein L28 3219076 rpmB 6158959 rpmB Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L28 YP_001711694.1 3218840 R 31964 CDS YP_001711695.1 170783361 6158955 complement(3219271..3219714) 1 NC_010407.1 ferric uptake regulation protein 3219714 fur 6158955 fur Clavibacter michiganensis subsp. sepedonicus ferric uptake regulation protein YP_001711695.1 3219271 R 31964 CDS YP_001711696.1 170783362 6158704 complement(3219711..3220637) 1 NC_010407.1 ABC transporter integral membrane protein 3220637 6158704 CMS_3074 Clavibacter michiganensis subsp. sepedonicus ABC transporter integral membrane protein YP_001711696.1 3219711 R 31964 CDS YP_001711697.1 170783363 6158564 complement(3220634..3221572) 1 NC_010407.1 ABC transporter ATP-binding protein 3221572 fhuC 6158564 fhuC Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711697.1 3220634 R 31964 CDS YP_001711698.1 170783364 6158689 complement(3221569..3222516) 1 NC_010407.1 substrate-binding transport protein 3222516 6158689 CMS_3076 Clavibacter michiganensis subsp. sepedonicus substrate-binding transport protein YP_001711698.1 3221569 R 31964 CDS YP_001711699.1 170783365 6158565 complement(3222586..3224028) 1 NC_010407.1 branched-chain alpha-keto acid dehydrogenase subunit E2 3224028 sucB 6158565 sucB Clavibacter michiganensis subsp. sepedonicus branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001711699.1 3222586 R 31964 CDS YP_001711700.1 170783366 6158999 complement(3224047..3225012) 1 NC_010407.1 pyruvate dehydrogenase E1 component subunit beta 3225012 pdhB 6158999 pdhB Clavibacter michiganensis subsp. sepedonicus pyruvate dehydrogenase E1 component subunit beta YP_001711700.1 3224047 R 31964 CDS YP_001711701.1 170783367 6158854 complement(3225099..3226211) 1 NC_010407.1 pyruvate dehydrogenase E1 component subunit alpha 3226211 pdhA 6158854 pdhA Clavibacter michiganensis subsp. sepedonicus pyruvate dehydrogenase E1 component subunit alpha YP_001711701.1 3225099 R 31964 CDS YP_001711702.1 170783368 6158853 complement(3226221..3227336) 1 NC_010407.1 aminotransferase 3227336 pat 6158853 pat Clavibacter michiganensis subsp. sepedonicus aminotransferase YP_001711702.1 3226221 R 31964 CDS YP_001711703.1 170783369 6158851 3227407..3227802 1 NC_010407.1 hypothetical protein 3227802 6158851 CMS_3081 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711703.1 3227407 D 31964 CDS YP_001711704.1 170783370 6158566 complement(3227811..3229172) 1 NC_010407.1 hypothetical protein 3229172 6158566 CMS_3082 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711704.1 3227811 R 31964 CDS YP_001711705.1 170783371 6158567 complement(3229169..3229480) 1 NC_010407.1 hypothetical protein 3229480 6158567 CMS_3083 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711705.1 3229169 R 31964 CDS YP_001711706.1 170783372 6158568 3229613..3230140 1 NC_010407.1 low molecular weight protein-tyrosine-phosphatase 3230140 ptpA 6158568 ptpA Clavibacter michiganensis subsp. sepedonicus low molecular weight protein-tyrosine-phosphatase YP_001711706.1 3229613 D 31964 CDS YP_001711707.1 170783373 6158889 3230163..3231536 1 NC_010407.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3231536 purB 6158889 purB Clavibacter michiganensis subsp. sepedonicus adenylosuccinate lyase YP_001711707.1 3230163 D 31964 CDS YP_001711708.1 170783374 6158896 complement(3231656..3231925) 1 NC_010407.1 hypothetical protein 3231925 6158896 CMS_3086 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711708.1 3231656 R 31964 CDS YP_001711709.1 170783375 6158569 complement(3231928..3232602) 1 NC_010407.1 hypothetical protein 3232602 6158569 CMS_3087 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711709.1 3231928 R 31964 CDS YP_001711710.1 170783376 6158570 3232691..3232807 1 NC_010407.1 small membrane protein 3232807 6158570 CMS_3088 Clavibacter michiganensis subsp. sepedonicus small membrane protein YP_001711710.1 3232691 D 31964 CDS YP_001711711.1 170783377 6158571 3232927..3233811 1 NC_010407.1 glucokinase 3233811 6158571 CMS_3089 Clavibacter michiganensis subsp. sepedonicus glucokinase YP_001711711.1 3232927 D 31964 CDS YP_001711712.1 170783378 6158572 3234028..3234999 1 NC_010407.1 glycerate kinase 3234999 6158572 CMS_3090 Clavibacter michiganensis subsp. sepedonicus glycerate kinase YP_001711712.1 3234028 D 31964 CDS YP_001711713.1 170783379 6158573 complement(3235012..3236274) 1 NC_010407.1 glycosyl transferase 3236274 6158573 CMS_3091 Clavibacter michiganensis subsp. sepedonicus glycosyl transferase YP_001711713.1 3235012 R 31964 CDS YP_001711714.1 170783380 6158574 3236457..3236846 1 NC_010407.1 MerR family transcriptional regulator 3236846 6158574 CMS_3092 Clavibacter michiganensis subsp. sepedonicus MerR family transcriptional regulator YP_001711714.1 3236457 D 31964 CDS YP_001711715.1 170783381 6158575 3236945..3238570 1 NC_010407.1 peptide chain release factor 3 3238570 prfC 6158575 prfC Clavibacter michiganensis subsp. sepedonicus peptide chain release factor 3 YP_001711715.1 3236945 D 31964 CDS YP_001711716.1 170783382 6158879 3238694..3239116 1 NC_010407.1 hypothetical protein 3239116 6158879 CMS_3094 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711716.1 3238694 D 31964 CDS YP_001711717.1 170783383 6158576 complement(3239233..3240612) 1 NC_010407.1 replicative DNA helicase 3240612 dnaB 6158576 dnaB Clavibacter michiganensis subsp. sepedonicus replicative DNA helicase YP_001711717.1 3239233 R 31964 CDS YP_001711718.1 170783384 6158665 complement(3241069..3241521) 1 NC_010407.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 3241521 rplI 6158665 rplI Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L9 YP_001711718.1 3241069 R 31964 CDS YP_001711719.1 170783385 6158946 complement(3241533..3241796) 1 NC_010407.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 3241796 rpsR 6158946 rpsR Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S18 YP_001711719.1 3241533 R 31964 CDS YP_001711720.1 170783386 6158969 complement(3241833..3242387) 1 NC_010407.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 3242387 ssb 6158969 ssb Clavibacter michiganensis subsp. sepedonicus single-stranded DNA-binding protein YP_001711720.1 3241833 R 31964 CDS YP_001711721.1 170783387 6158997 complement(3242391..3242855) 1 NC_010407.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 3242855 rpsF 6158997 rpsF Clavibacter michiganensis subsp. sepedonicus 30S ribosomal protein S6 YP_001711721.1 3242391 R 31964 CDS YP_001711722.1 170783388 6158966 complement(3243019..3244386) 1 NC_010407.1 RNA nucleotidyltransferase 3244386 6158966 CMS_3100 Clavibacter michiganensis subsp. sepedonicus RNA nucleotidyltransferase YP_001711722.1 3243019 R 31964 CDS YP_001711723.1 170783389 6158577 3244542..3246827 1 NC_010407.1 sortase-sorted surface-anchored protein 3246827 6158577 CMS_3101 Clavibacter michiganensis subsp. sepedonicus sortase-sorted surface-anchored protein YP_001711723.1 3244542 D 31964 CDS YP_001711724.1 170783390 6158578 3246867..3248519 1 NC_010407.1 hypothetical protein 3248519 6158578 CMS_3102 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711724.1 3246867 D 31964 CDS YP_001711725.1 170783391 6158579 3248676..3249713 1 NC_010407.1 thioredoxin reductase 3249713 trxB 6158579 trxB Clavibacter michiganensis subsp. sepedonicus thioredoxin reductase YP_001711725.1 3248676 D 31964 CDS YP_001711726.1 170783392 6159080 3249782..3250105 1 NC_010407.1 thioredoxin 3250105 trxA 6159080 trxA Clavibacter michiganensis subsp. sepedonicus thioredoxin YP_001711726.1 3249782 D 31964 CDS YP_001711727.1 170783393 6159079 3250272..3251594 1 NC_010407.1 aminotransferase 3251594 6159079 CMS_3105 Clavibacter michiganensis subsp. sepedonicus aminotransferase YP_001711727.1 3250272 D 31964 CDS YP_001711728.1 170783394 6158580 3251638..3252603 1 NC_010407.1 D-alanine--D-alanine ligase 3252603 ddlB 6158580 ddlB Clavibacter michiganensis subsp. sepedonicus D-alanine--D-alanine ligase YP_001711728.1 3251638 D 31964 CDS YP_001711729.1 170783395 6158657 complement(3252656..3253648) 1 NC_010407.1 chromosome partitioning protein ParB 3253648 parB 6158657 parB Clavibacter michiganensis subsp. sepedonicus chromosome partitioning protein ParB YP_001711729.1 3252656 R 31964 CDS YP_001711730.1 170783396 6158850 complement(3253648..3254529) 1 NC_010407.1 chromosome partitioning protein ParA 3254529 parA 6158850 parA Clavibacter michiganensis subsp. sepedonicus chromosome partitioning protein ParA YP_001711730.1 3253648 R 31964 CDS YP_001711731.1 170783397 6158849 complement(3254679..3255314) 1 NC_010407.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 3255314 gidB 6158849 gidB Clavibacter michiganensis subsp. sepedonicus 16S rRNA methyltransferase GidB YP_001711731.1 3254679 R 31964 CDS YP_001711732.1 170783398 6158716 complement(3255417..3255614) 1 NC_010407.1 hypothetical protein 3255614 6158716 CMS_3110 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711732.1 3255417 R 31964 CDS YP_001711733.1 170783399 6158581 complement(3255879..3256409) 1 NC_010407.1 hypothetical protein 3256409 6158581 CMS_3111 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711733.1 3255879 R 31964 CDS YP_001711734.1 170783400 6158582 complement(3256406..3257368) 1 NC_010407.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 3257368 oxaA 6158582 oxaA Clavibacter michiganensis subsp. sepedonicus inner membrane protein translocase component YidC YP_001711734.1 3256406 R 31964 CDS YP_001711735.1 170783401 6158846 complement(3257379..3257690) 1 NC_010407.1 hypothetical protein 3257690 6158846 CMS_3113 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711735.1 3257379 R 31964 CDS YP_001711736.1 170783402 6158583 complement(3257687..3258007) 1 NC_010407.1 ribonuclease P protein component 3258007 rnpA 6158583 rnpA Clavibacter michiganensis subsp. sepedonicus ribonuclease P protein component YP_001711736.1 3257687 R 31964 CDS YP_001711737.1 170783403 6158942 complement(3258032..3258169) 1 NC_010407.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 3258169 rpmH 6158942 rpmH Clavibacter michiganensis subsp. sepedonicus 50S ribosomal protein L34 YP_001711737.1 3258032 R 31964 CDS YP_001711738.1 189016699 6325508 3655..3975 1 NC_010408.1 hypothetical protein 3975 6325508 CMS_pCSL0004 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711738.1 3655 D 31964 CDS YP_001711739.1 189016700 6325421 4153..4380 1 NC_010408.1 hypothetical protein 4380 6325421 CMS_pCSL0005 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711739.1 4153 D 31964 CDS YP_001711740.1 189016701 6325422 4398..4586 1 NC_010408.1 hypothetical protein 4586 6325422 CMS_pCSL0006 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711740.1 4398 D 31964 CDS YP_001711741.1 189016702 6325396 4850..5383 1 NC_010408.1 hypothetical protein 5383 6325396 CMS_pCSL0007 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711741.1 4850 D 31964 CDS YP_001711742.1 189016703 6325397 5478..6320 1 NC_010408.1 hypothetical protein 6320 6325397 CMS_pCSL0008 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711742.1 5478 D 31964 CDS YP_001711743.1 189016704 6325398 6590..7543 1 NC_010408.1 putative DNA processing SMF-family protein 7543 smf 6325398 smf Clavibacter michiganensis subsp. sepedonicus putative DNA processing SMF-family protein YP_001711743.1 6590 D 31964 CDS YP_001711744.1 189016705 6325507 complement(7616..8026) 1 NC_010408.1 hypothetical protein 8026 6325507 CMS_pCSL0010 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711744.1 7616 R 31964 CDS YP_001711745.1 189016706 6325399 8167..8514 1 NC_010408.1 LSR2-family protein 8514 lsr2 6325399 lsr2 Clavibacter michiganensis subsp. sepedonicus LSR2-family protein YP_001711745.1 8167 D 31964 CDS YP_001711746.1 189016707 6325505 complement(8576..9796) 1 NC_010408.1 probable major facilitator superfamily transporter 9796 6325505 CMS_pCSL0012 Clavibacter michiganensis subsp. sepedonicus probable major facilitator superfamily transporter YP_001711746.1 8576 R 31964 CDS YP_001711747.1 189016708 6325400 complement(9923..10120) 1 NC_010408.1 hypothetical protein 10120 6325400 CMS_pCSL0014 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711747.1 9923 R 31964 CDS YP_001711748.1 189016709 6325401 complement(10137..11852) 1 NC_010408.1 ABC transporter ATP-binding protein 11852 6325401 CMS_pCSL0015 Clavibacter michiganensis subsp. sepedonicus ABC transporter ATP-binding protein YP_001711748.1 10137 R 31964 CDS YP_001711749.1 189016710 6325403 complement(15043..16341) 1 NC_010408.1 hypothetical protein 16341 6325403 CMS_pCSL0018 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711749.1 15043 R 31964 CDS YP_001711750.1 189016711 6325404 complement(16404..16580) 1 NC_010408.1 hypothetical protein 16580 6325404 CMS_pCSL0019 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711750.1 16404 R 31964 CDS YP_001711751.1 189016712 6325405 complement(16889..17236) 1 NC_010408.1 hypothetical protein 17236 6325405 CMS_pCSL0020 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711751.1 16889 R 31964 CDS YP_001711752.1 189016713 6325406 complement(17299..17637) 1 NC_010408.1 hypothetical protein 17637 6325406 CMS_pCSL0021 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711752.1 17299 R 31964 CDS YP_001711753.1 189016714 6325407 17671..18093 1 NC_010408.1 hypothetical protein 18093 6325407 CMS_pCSL0022 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711753.1 17671 D 31964 CDS YP_001711754.1 189016715 6325408 complement(18090..18269) 1 NC_010408.1 hypothetical protein 18269 6325408 CMS_pCSL0023 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711754.1 18090 R 31964 CDS YP_001711755.1 189016716 6325409 18465..19052 1 NC_010408.1 hypothetical protein 19052 6325409 CMS_pCSL0024 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711755.1 18465 D 31964 CDS YP_001711756.1 189016717 6325410 complement(19083..19577) 1 NC_010408.1 hypothetical protein 19577 6325410 CMS_pCSL0025 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711756.1 19083 R 31964 CDS YP_001711757.1 189016718 6325411 complement(19583..19927) 1 NC_010408.1 hypothetical protein 19927 6325411 CMS_pCSL0026 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711757.1 19583 R 31964 CDS YP_001711758.1 189016719 6325412 complement(19942..20715) 1 NC_010408.1 putative secreted protein 20715 6325412 CMS_pCSL0027 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711758.1 19942 R 31964 CDS YP_001711759.1 189016720 6325413 complement(20712..21056) 1 NC_010408.1 hypothetical protein 21056 6325413 CMS_pCSL0028 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711759.1 20712 R 31964 CDS YP_001711760.1 189016721 6325414 complement(21147..21800) 1 NC_010408.1 hypothetical protein 21800 6325414 CMS_pCSL0029 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711760.1 21147 R 31964 CDS YP_001711761.1 189016722 6325415 21918..22880 1 NC_010408.1 putative transposase 22880 6325415 CMS_pCSL0030 Clavibacter michiganensis subsp. sepedonicus putative transposase YP_001711761.1 21918 D 31964 CDS YP_001711762.1 189016723 6325416 23114..23725 1 NC_010408.1 hypothetical protein 23725 6325416 CMS_pCSL0032 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711762.1 23114 D 31964 CDS YP_001711763.1 189016724 6325417 23838..24281 1 NC_010408.1 hypothetical protein 24281 6325417 CMS_pCSL0033 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711763.1 23838 D 31964 CDS YP_001711764.1 189016725 6325418 24350..24859 1 NC_010408.1 hypothetical protein 24859 6325418 CMS_pCSL0034 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711764.1 24350 D 31964 CDS YP_001711765.1 189016726 6325419 24894..25802 1 NC_010408.1 hypothetical protein 25802 6325419 CMS_pCSL0035 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711765.1 24894 D 31964 CDS YP_001711766.1 189016727 6325420 25799..26389 1 NC_010408.1 hypothetical protein 26389 6325420 CMS_pCSL0036 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711766.1 25799 D 31964 CDS YP_001711767.1 189016728 6325423 26386..27258 1 NC_010408.1 hypothetical protein 27258 6325423 CMS_pCSL0037 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711767.1 26386 D 31964 CDS YP_001711768.1 189016729 6325424 27255..27494 1 NC_010408.1 hypothetical protein 27494 6325424 CMS_pCSL0039 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711768.1 27255 D 31964 CDS YP_001711769.1 189016730 6325425 27491..27847 1 NC_010408.1 hypothetical protein 27847 6325425 CMS_pCSL0040 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711769.1 27491 D 31964 CDS YP_001711770.1 189016731 6325426 27844..28095 1 NC_010408.1 hypothetical protein 28095 6325426 CMS_pCSL0041 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711770.1 27844 D 31964 CDS YP_001711771.1 189016732 6325427 28092..28556 1 NC_010408.1 hypothetical protein 28556 6325427 CMS_pCSL0042 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711771.1 28092 D 31964 CDS YP_001711772.1 189016733 6325428 28553..29311 1 NC_010408.1 hypothetical protein 29311 6325428 CMS_pCSL0043 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711772.1 28553 D 31964 CDS YP_001711773.1 189016734 6325429 29497..29925 1 NC_010408.1 hypothetical protein 29925 6325429 CMS_pCSL0044 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711773.1 29497 D 31964 CDS YP_001711774.1 189016735 6325430 complement(30000..30179) 1 NC_010408.1 hypothetical protein 30179 6325430 CMS_pCSL0045 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711774.1 30000 R 31964 CDS YP_001711775.1 189016736 6325431 complement(30176..30667) 1 NC_010408.1 hypothetical protein 30667 6325431 CMS_pCSL0046 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711775.1 30176 R 31964 CDS YP_001711776.1 189016737 6325432 complement(30696..32561) 1 NC_010408.1 hypothetical protein 32561 6325432 CMS_pCSL0047 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711776.1 30696 R 31964 CDS YP_001711777.1 189016738 6325433 complement(32601..33266) 1 NC_010408.1 hypothetical protein 33266 6325433 CMS_pCSL0048 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711777.1 32601 R 31964 CDS YP_001711778.1 189016739 6325434 complement(33263..33883) 1 NC_010408.1 hypothetical protein 33883 6325434 CMS_pCSL0049 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711778.1 33263 R 31964 CDS YP_001711779.1 189016740 6325435 complement(33880..34320) 1 NC_010408.1 hypothetical protein 34320 6325435 CMS_pCSL0050 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711779.1 33880 R 31964 CDS YP_001711780.1 189016741 6325436 complement(34344..34700) 1 NC_010408.1 putative secreted protein 34700 6325436 CMS_pCSL0051 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711780.1 34344 R 31964 CDS YP_001711781.1 189016742 6325437 complement(34700..36334) 1 NC_010408.1 putative DNA modification methylase 36334 SLP2.27 6325437 SLP2.27 Clavibacter michiganensis subsp. sepedonicus putative DNA modification methylase YP_001711781.1 34700 R 31964 CDS YP_001711782.1 189016743 6325506 complement(36403..36732) 1 NC_010408.1 hypothetical protein 36732 6325506 CMS_pCSL0053 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711782.1 36403 R 31964 CDS YP_001711783.1 189016744 6325438 complement(36729..37757) 1 NC_010408.1 hypothetical protein 37757 6325438 CMS_pCSL0054 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711783.1 36729 R 31964 CDS YP_001711784.1 189016745 6325439 complement(37796..38341) 1 NC_010408.1 hypothetical protein 38341 6325439 CMS_pCSL0055 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711784.1 37796 R 31964 CDS YP_001711785.1 189016746 6325440 complement(38350..38763) 1 NC_010408.1 hypothetical protein 38763 6325440 CMS_pCSL0056 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711785.1 38350 R 31964 CDS YP_001711786.1 189016747 6325441 complement(38760..39188) 1 NC_010408.1 hypothetical protein 39188 6325441 CMS_pCSL0057 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711786.1 38760 R 31964 CDS YP_001711787.1 189016748 6325442 complement(39185..40003) 1 NC_010408.1 putative secreted protein 40003 6325442 CMS_pCSL0058 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711787.1 39185 R 31964 CDS YP_001711788.1 189016749 6325443 complement(40068..40436) 1 NC_010408.1 hypothetical protein 40436 6325443 CMS_pCSL0059 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711788.1 40068 R 31964 CDS YP_001711789.1 189016750 6325444 complement(40488..40973) 1 NC_010408.1 hypothetical protein 40973 6325444 CMS_pCSL0060 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711789.1 40488 R 31964 CDS YP_001711790.1 189016751 6325445 complement(40988..41869) 1 NC_010408.1 putative secreted protein 41869 6325445 CMS_pCSL0061 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711790.1 40988 R 31964 CDS YP_001711791.1 189016752 6325446 complement(41866..42207) 1 NC_010408.1 hypothetical protein 42207 6325446 CMS_pCSL0062 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711791.1 41866 R 31964 CDS YP_001711792.1 189016753 6325447 complement(42276..42800) 1 NC_010408.1 hypothetical protein 42800 6325447 CMS_pCSL0063 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711792.1 42276 R 31964 CDS YP_001711793.1 189016754 6325448 42957..43919 1 NC_010408.1 putative transposase 43919 6325448 CMS_pCSL0064 Clavibacter michiganensis subsp. sepedonicus putative transposase YP_001711793.1 42957 D 31964 CDS YP_001711794.1 189016755 6325449 complement(44156..45100) 1 NC_010408.1 hypothetical protein 45100 6325449 CMS_pCSL0065 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711794.1 44156 R 31964 CDS YP_001711795.1 189016756 6325450 45160..45879 1 NC_010408.1 hypothetical protein 45879 6325450 CMS_pCSL0066 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711795.1 45160 D 31964 CDS YP_001711796.1 189016757 6325451 complement(46181..47506) 1 NC_010408.1 hypothetical protein 47506 6325451 CMS_pCSL0067 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711796.1 46181 R 31964 CDS YP_001711797.1 189016758 6325452 complement(47571..48200) 1 NC_010408.1 hypothetical protein 48200 6325452 CMS_pCSL0068 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711797.1 47571 R 31964 CDS YP_001711798.1 189016759 6325453 complement(48214..51264) 1 NC_010408.1 putative large membrane protein 51264 6325453 CMS_pCSL0069 Clavibacter michiganensis subsp. sepedonicus putative large membrane protein YP_001711798.1 48214 R 31964 CDS YP_001711799.1 189016760 6325454 complement(51278..51865) 1 NC_010408.1 hypothetical protein 51865 6325454 CMS_pCSL0070 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711799.1 51278 R 31964 CDS YP_001711800.1 189016761 6325455 complement(52274..52924) 1 NC_010408.1 putative secreted protein 52924 6325455 CMS_pCSL0071 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711800.1 52274 R 31964 CDS YP_001711801.1 189016762 6325456 complement(52942..53319) 1 NC_010408.1 putative secreted protein 53319 6325456 CMS_pCSL0072 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711801.1 52942 R 31964 CDS YP_001711802.1 189016763 6325457 complement(53324..53767) 1 NC_010408.1 putative secreted protein 53767 6325457 CMS_pCSL0073 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711802.1 53324 R 31964 CDS YP_001711803.1 189016764 6325458 complement(53764..54180) 1 NC_010408.1 hypothetical protein 54180 6325458 CMS_pCSL0074 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711803.1 53764 R 31964 CDS YP_001711804.1 189016765 6325459 complement(54191..54406) 1 NC_010408.1 hypothetical protein 54406 6325459 CMS_pCSL0075 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711804.1 54191 R 31964 CDS YP_001711805.1 189016766 6325460 complement(54425..55306) 1 NC_010408.1 hypothetical protein 55306 6325460 CMS_pCSL0076 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711805.1 54425 R 31964 CDS YP_001711806.1 189016767 6325461 complement(55303..56169) 1 NC_010408.1 hypothetical protein 56169 6325461 CMS_pCSL0077 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711806.1 55303 R 31964 CDS YP_001711807.1 189016768 6325462 complement(56169..57770) 1 NC_010408.1 hypothetical protein 57770 6325462 CMS_pCSL0078 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711807.1 56169 R 31964 CDS YP_001711808.1 189016769 6325463 complement(57770..58606) 1 NC_010408.1 hypothetical protein 58606 6325463 CMS_pCSL0079 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711808.1 57770 R 31964 CDS YP_001711809.1 189016770 6325464 complement(58609..59304) 1 NC_010408.1 hypothetical protein 59304 6325464 CMS_pCSL0080 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711809.1 58609 R 31964 CDS YP_001711810.1 189016771 6325465 complement(59485..59820) 1 NC_010408.1 hypothetical protein 59820 6325465 CMS_pCSL0081 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711810.1 59485 R 31964 CDS YP_001711811.1 189016772 6325466 59819..61516 1 NC_010408.1 hypothetical protein 61516 6325466 CMS_pCSL0082 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711811.1 59819 D 31964 CDS YP_001711812.1 189016773 6325467 complement(61536..62264) 1 NC_010408.1 hypothetical protein 62264 6325467 CMS_pCSL0083 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711812.1 61536 R 31964 CDS YP_001711813.1 189016774 6325468 62530..62772 1 NC_010408.1 hypothetical protein 62772 6325468 CMS_pCSL0084 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711813.1 62530 D 31964 CDS YP_001711814.1 189016775 6325469 62776..63804 1 NC_010408.1 hypothetical protein 63804 6325469 CMS_pCSL0085 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711814.1 62776 D 31964 CDS YP_001711815.1 189016776 6325470 63807..64154 1 NC_010408.1 hypothetical protein 64154 6325470 CMS_pCSL0086 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711815.1 63807 D 31964 CDS YP_001711816.1 189016777 6325471 64161..64823 1 NC_010408.1 hypothetical protein 64823 6325471 CMS_pCSL0087 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711816.1 64161 D 31964 CDS YP_001711817.1 189016778 6325472 64823..65860 1 NC_010408.1 hypothetical protein 65860 6325472 CMS_pCSL0088 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711817.1 64823 D 31964 CDS YP_001711818.1 189016779 6325473 65857..67377 1 NC_010408.1 hypothetical protein 67377 6325473 CMS_pCSL0089 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711818.1 65857 D 31964 CDS YP_001711819.1 189016780 6325474 67374..69356 1 NC_010408.1 hypothetical protein 69356 6325474 CMS_pCSL0090 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711819.1 67374 D 31964 CDS YP_001711820.1 189016781 6325475 69353..70474 1 NC_010408.1 putative secreted protein 70474 6325475 CMS_pCSL0091 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711820.1 69353 D 31964 CDS YP_001711821.1 189016782 6325476 70621..71217 1 NC_010408.1 hypothetical protein 71217 6325476 CMS_pCSL0092 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711821.1 70621 D 31964 CDS YP_001711822.1 189016783 6325477 71260..71577 1 NC_010408.1 hypothetical protein 71577 6325477 CMS_pCSL0093 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711822.1 71260 D 31964 CDS YP_001711823.1 189016784 6325478 71574..73694 1 NC_010408.1 putative FtsK/SpoIIIE family protein 73694 6325478 CMS_pCSL0094 Clavibacter michiganensis subsp. sepedonicus putative FtsK/SpoIIIE family protein YP_001711823.1 71574 D 31964 CDS YP_001711824.1 189016785 6325479 73767..74003 1 NC_010408.1 hypothetical protein 74003 6325479 CMS_pCSL0095 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711824.1 73767 D 31964 CDS YP_001711825.1 189016786 6325480 74326..75582 1 NC_010408.1 hypothetical protein 75582 6325480 CMS_pCSL0096 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711825.1 74326 D 31964 CDS YP_001711826.1 189016787 6325481 complement(76169..76558) 1 NC_010408.1 hypothetical protein 76558 6325481 CMS_pCSL0097 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711826.1 76169 R 31964 CDS YP_001711827.1 189016788 6325482 complement(76555..77283) 1 NC_010408.1 putative partitioning protein ParA 77283 6325482 CMS_pCSL0098 Clavibacter michiganensis subsp. sepedonicus putative partitioning protein ParA YP_001711827.1 76555 R 31964 CDS YP_001711828.1 189016789 6325483 complement(77354..78112) 1 NC_010408.1 hypothetical protein 78112 6325483 CMS_pCSL0099 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711828.1 77354 R 31964 CDS YP_001711829.1 189016790 6325484 complement(78112..79743) 1 NC_010408.1 hypothetical protein 79743 6325484 CMS_pCSL0100 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711829.1 78112 R 31964 CDS YP_001711830.1 189016791 6325485 complement(79855..80124) 1 NC_010408.1 hypothetical protein 80124 6325485 CMS_pCSL0101 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711830.1 79855 R 31964 CDS YP_001711831.1 189016792 6325486 80147..80671 1 NC_010408.1 hypothetical protein 80671 6325486 CMS_pCSL0102 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711831.1 80147 D 31964 CDS YP_001711832.1 189016793 6325487 80675..81517 1 NC_010408.1 hypothetical protein 81517 6325487 CMS_pCSL0103 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711832.1 80675 D 31964 CDS YP_001711833.1 189016794 6325488 81514..82080 1 NC_010408.1 hypothetical protein 82080 6325488 CMS_pCSL0104 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711833.1 81514 D 31964 CDS YP_001711834.1 189016795 6325489 complement(82183..82443) 1 NC_010408.1 hypothetical protein 82443 6325489 CMS_pCSL0105 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711834.1 82183 R 31964 CDS YP_001711835.1 189016796 6325490 82601..82816 1 NC_010408.1 hypothetical protein 82816 6325490 CMS_pCSL0106 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711835.1 82601 D 31964 CDS YP_001711836.1 189016797 6325491 82822..83349 1 NC_010408.1 hypothetical protein 83349 6325491 CMS_pCSL0107 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711836.1 82822 D 31964 CDS YP_001711837.1 189016798 6325492 83444..83680 1 NC_010408.1 hypothetical protein 83680 6325492 CMS_pCSL0108 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711837.1 83444 D 31964 CDS YP_001711838.1 189016799 6325493 complement(83923..84429) 1 NC_010408.1 hypothetical protein 84429 6325493 CMS_pCSL0109 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711838.1 83923 R 31964 CDS YP_001711839.1 189016800 6325494 84575..84928 1 NC_010408.1 hypothetical protein 84928 6325494 CMS_pCSL0110 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711839.1 84575 D 31964 CDS YP_001711840.1 189016801 6325495 84996..85376 1 NC_010408.1 hypothetical protein 85376 6325495 CMS_pCSL0111 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711840.1 84996 D 31964 CDS YP_001711841.1 189016802 6325496 85435..85680 1 NC_010408.1 hypothetical protein 85680 6325496 CMS_pCSL0112 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711841.1 85435 D 31964 CDS YP_001711842.1 189016803 6325497 85733..86491 1 NC_010408.1 hypothetical protein 86491 6325497 CMS_pCSL0114 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711842.1 85733 D 31964 CDS YP_001711843.1 189016804 6325498 86507..87460 1 NC_010408.1 hypothetical protein 87460 6325498 CMS_pCSL0115 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711843.1 86507 D 31964 CDS YP_001711844.1 189016805 6325499 complement(87602..88261) 1 NC_010408.1 hypothetical protein 88261 6325499 CMS_pCSL0116 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711844.1 87602 R 31964 CDS YP_001711845.1 189016806 6325500 complement(88265..89125) 1 NC_010408.1 putative secreted protein 89125 6325500 CMS_pCSL0117 Clavibacter michiganensis subsp. sepedonicus putative secreted protein YP_001711845.1 88265 R 31964 CDS YP_001711846.1 189016807 6325501 89260..90045 1 NC_010408.1 hypothetical protein 90045 6325501 CMS_pCSL0118 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711846.1 89260 D 31964 CDS YP_001711847.1 189016808 6325502 complement(90207..90395) 1 NC_010408.1 hypothetical protein 90395 6325502 CMS_pCSL0119 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711847.1 90207 R 31964 CDS YP_001711848.1 189016809 6325503 complement(90413..90640) 1 NC_010408.1 hypothetical protein 90640 6325503 CMS_pCSL0120 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711848.1 90413 R 31964 CDS YP_001711849.1 189016810 6325504 complement(90818..91138) 1 NC_010408.1 hypothetical protein 91138 6325504 CMS_pCSL0121 Clavibacter michiganensis subsp. sepedonicus hypothetical protein YP_001711849.1 90818 R 31964 CDS