-- dump date 20140619_041402 -- class Genbank::CDS -- table cds_note -- id note YP_002461390.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_002461391.1 PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: cau:Caur_2531 peptidase S41 YP_002461392.1 PFAM: aminotransferase class I and II; KEGG: cau:Caur_2532 aminotransferase class I and II YP_002461393.1 PFAM: pseudouridine synthase; KEGG: cau:Caur_2533 pseudouridine synthase YP_002461394.1 KEGG: rha:RHA1_ro01756 D-methionine-binding lipoprotein YP_002461395.1 KEGG: cau:Caur_2534 hypothetical protein YP_002461396.1 KEGG: cau:Caur_2535 hypothetical protein YP_002461398.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2649 ABC transporter related YP_002461399.1 TIGRFAM: valyl-tRNA synthetase; KEGG: cau:Caur_2648 valyl-tRNA synthetase YP_002461400.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: cau:Caur_2647 alpha/beta hydrolase fold-containing protein YP_002461401.1 KEGG: cau:Caur_2646 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002461402.1 PFAM: response regulator receiver; SMART: GGDEF domain containing protein; KEGG: cau:Caur_2645 response regulator receiver YP_002461403.1 KEGG: cau:Caur_2644 N-acetylglucosamine-1-phosphate uridyltransferase-like protein YP_002461404.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: cau:Caur_2643 excinuclease ABC, A subunit YP_002461405.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_2642 short-chain dehydrogenase/reductase SDR YP_002461406.1 PFAM: GTP cyclohydrolase I; KEGG: cau:Caur_2641 GTP cyclohydrolase I YP_002461407.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cau:Caur_2640 putative 6-pyruvoyl tetrahydropterin synthase YP_002461408.1 KEGG: cau:Caur_2639 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_002461409.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_2638 regulatory protein LuxR YP_002461410.1 PFAM: WD40 domain protein beta Propeller; KEGG: cau:Caur_2637 hypothetical protein YP_002461411.1 KEGG: cau:Caur_2636 hypothetical protein YP_002461412.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: cau:Caur_2635 peptidase S8 and S53 subtilisin kexin sedolisin YP_002461413.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: cau:Caur_2634 formate--tetrahydrofolate ligase YP_002461414.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; KEGG: cau:Caur_2633 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase YP_002461415.1 PFAM: peptidase M19 renal dipeptidase; KEGG: cau:Caur_2632 membrane dipeptidase YP_002461416.1 KEGG: cau:Caur_2631 FAD dependent oxidoreductase YP_002461417.1 PFAM: peptidase M16 domain protein; KEGG: cau:Caur_2630 peptidase M16 domain-containing protein YP_002461418.1 PFAM: GAF domain protein; KEGG: cau:Caur_2629 GAF domain-containing protein YP_002461419.1 PFAM: isochorismatase hydrolase; KEGG: cau:Caur_3916 nicotinamidase-like amidase YP_002461420.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cau:Caur_3915 phosphate transport system regulatory protein PhoU YP_002461421.1 TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG: cau:Caur_3914 methionine synthase YP_002461422.1 KEGG: rca:Rcas_2246 hypothetical protein YP_002461423.1 KEGG: cau:Caur_3912 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002461424.1 PFAM: virulence factor MVIN family protein; KEGG: cau:Caur_3911 virulence factor MviN family protein YP_002461425.1 PFAM: protein of unknown function DUF58; KEGG: cau:Caur_3910 hypothetical protein YP_002461426.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: cau:Caur_3909 peptidase M14 carboxypeptidase A YP_002461427.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cau:Caur_3908 hexapaptide repeat-containing transferase YP_002461428.1 KEGG: cau:Caur_3907 hypothetical protein YP_002461429.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: cau:Caur_3889 isocitrate lyase YP_002461430.1 KEGG: cau:Caur_3890 MazG nucleotide pyrophosphohydrolase YP_002461431.1 KEGG: cau:Caur_3891 hypothetical protein YP_002461432.1 TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: cau:Caur_3892 threonine dehydratase YP_002461433.1 PFAM: cell cycle protein; KEGG: cau:Caur_3893 cell cycle protein YP_002461434.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cau:Caur_3894 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002461435.1 PFAM: protein of unknown function DUF1641; KEGG: cau:Caur_3895 hypothetical protein YP_002461436.1 PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: cau:Caur_3896 beta-lactamase domain-containing protein YP_002461437.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cau:Caur_3897 LysR substrate-binding YP_002461438.1 KEGG: cau:Caur_3898 hypothetical protein YP_002461439.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_3899 sigma-70 family RNA polymerase sigma factor YP_002461440.1 TIGRFAM: glutaredoxin-like domain protein; KEGG: cau:Caur_3900 glutaredoxin-like domain-containing protein YP_002461441.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_3901 major facilitator transporter YP_002461442.1 KEGG: cau:Caur_3902 putative esterase YP_002461443.1 PFAM: TadE family protein; KEGG: cau:Caur_3903 TadE family protein YP_002461444.1 PFAM: TadE family protein; KEGG: cau:Caur_3904 TadE family protein YP_002461445.1 SMART: von Willebrand factor type A; KEGG: cau:Caur_3905 von Willebrand factor type A YP_002461446.1 KEGG: cau:Caur_3906 hypothetical protein YP_002461447.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: cau:Caur_3888 phosphoenolpyruvate carboxylase YP_002461448.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: cau:Caur_3280 formiminotransferase-cyclodeaminase YP_002461449.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: cau:Caur_3281 methenyltetrahydrofolate cyclohydrolase YP_002461450.1 PFAM: phosphoribosylglycinamide synthetase; KEGG: cau:Caur_3282 phosphoribosylamine--glycine ligase YP_002461451.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_3283 GCN5-related N-acetyltransferase YP_002461452.1 TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; KEGG: cau:Caur_3284 poly(hydroxyalkanoate) granule-associated protein YP_002461453.1 PFAM: PHA accumulation regulator DNA-binding protein; KEGG: cau:Caur_3285 PHA accumulation regulator DNA-binding protein YP_002461454.1 PFAM: Patatin; KEGG: cau:Caur_3286 patatin YP_002461455.1 KEGG: cau:Caur_3287 glycosyl transferase group 1 YP_002461456.1 PFAM: tyrosine protein kinase; WD-40 repeat protein; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; KEGG: cau:Caur_3288 WD-40 repeat-containing protein YP_002461458.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate YP_002461459.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters YP_002461460.1 TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cau:Caur_3291 glycerol-3-phosphate dehydrogenase, anaerobic, A subunit YP_002461461.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: cau:Caur_3292 glycerol kinase YP_002461462.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: cau:Caur_3293 dihydroxyacetone kinase, L subunit YP_002461463.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase YP_002461464.1 PFAM: major intrinsic protein; KEGG: cau:Caur_3295 major intrinsic protein YP_002461465.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; PAS fold-4 domain protein; KEGG: cau:Caur_3071 sigma-54 factor interaction domain-containing protein YP_002461466.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cau:Caur_3557 acyl-CoA dehydrogenase domain-containing protein YP_002461467.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: cau:Caur_3869 glycoside hydrolase family 3 protein YP_002461468.1 PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: cau:Caur_3868 glycoside hydrolase family protein YP_002461469.1 KEGG: cau:Caur_3867 hypothetical protein YP_002461470.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cau:Caur_3866 alanine racemase YP_002461471.1 KEGG: cau:Caur_3865 hypothetical protein YP_002461472.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3864 binding-protein-dependent transport systems inner membrane component YP_002461473.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3863 binding-protein-dependent transport systems inner membrane component YP_002461474.1 KEGG: cau:Caur_3862 hypothetical protein YP_002461475.1 KEGG: cau:Caur_3861 NHL repeat-containing protein YP_002461476.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3860 binding-protein-dependent transport systems inner membrane component YP_002461477.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3859 binding-protein-dependent transport systems inner membrane component YP_002461478.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_3858 extracellular solute-binding protein YP_002461479.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_3857 extracellular solute-binding protein YP_002461480.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cau:Caur_3856 glycosyltransferase 36 YP_002461481.1 KEGG: cau:Caur_3851 hypothetical protein YP_002461482.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_3850 GCN5-related N-acetyltransferase YP_002461483.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: cau:Caur_3849 Holliday junction resolvase YqgF YP_002461484.1 KEGG: cau:Caur_3848 hypothetical protein YP_002461485.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002461486.1 KEGG: cau:Caur_3846 hypothetical protein YP_002461487.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cau:Caur_3845 acyl-CoA dehydrogenase domain-containing protein YP_002461489.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_002461490.1 KEGG: cau:Caur_0192 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002461491.1 KEGG: cau:Caur_0191 hypothetical protein YP_002461492.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cau:Caur_0189 diguanylate cyclase YP_002461493.1 PFAM: ThiJ/PfpI domain protein; KEGG: cau:Caur_0188 ThiJ/PfpI domain-containing protein YP_002461494.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0187 glycosyl transferase group 1 YP_002461495.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: cau:Caur_2726 citrate transporter YP_002461496.1 PFAM: DNA/RNA non-specific endonuclease; KEGG: hau:Haur_1138 DNA/RNA non-specific endonuclease YP_002461497.1 PFAM: Nuclease A inhibitor family protein; KEGG: ana:all8013 nuclease inhibitor homolog YP_002461498.1 KEGG: cau:Caur_0045 hypothetical protein YP_002461499.1 PFAM: protein of unknown function DUF407; KEGG: cau:Caur_0046 hypothetical protein YP_002461500.1 PFAM: periplasmic binding protein; KEGG: cau:Caur_0047 periplasmic binding protein YP_002461501.1 PFAM: protein of unknown function DUF547; KEGG: cau:Caur_0048 hypothetical protein YP_002461502.1 PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: cau:Caur_0054 hypothetical protein YP_002461503.1 PFAM: protein of unknown function RIO1; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_0055 protein kinase YP_002461504.1 PFAM: Forkhead-associated protein; transcriptional regulator domain protein; KEGG: cau:Caur_0056 transcriptional regulator domain-containing protein YP_002461505.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002461506.1 KEGG: cau:Caur_0058 hypothetical protein YP_002461507.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: cau:Caur_0059 UDP-glucose 4-epimerase YP_002461508.1 PFAM: tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_0060 protein kinase YP_002461509.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cau:Caur_0061 ATPase YP_002461510.1 PFAM: protein of unknown function DUF214; KEGG: cau:Caur_0062 hypothetical protein YP_002461511.1 PFAM: acyl-coA-binding protein ACBP; KEGG: cau:Caur_0063 acyl-CoA-binding protein YP_002461512.1 PFAM: RNP-1 like RNA-binding protein; KEGG: cau:Caur_0064 RNP-1 like RNA-binding protein YP_002461513.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_0224 major facilitator transporter YP_002461514.1 KEGG: Prb1; proline-rich protein BstNI subfamily 1 YP_002461515.1 KEGG: cau:Caur_0223 hypothetical protein YP_002461516.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cau:Caur_0222 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002461517.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: cau:Caur_0221 ion transport 2 domain-containing protein YP_002461518.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: cau:Caur_0220 oligoendopeptidase F YP_002461519.1 PFAM: protein of unknown function DUF87; KEGG: cau:Caur_2806 hypothetical protein YP_002461520.1 PFAM: response regulator receiver; KEGG: cau:Caur_2807 response regulator receiver YP_002461521.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cau:Caur_2808 HAD family hydrolase YP_002461522.1 KEGG: cau:Caur_2930 hypothetical protein YP_002461523.1 PFAM: peptidase C60 sortase A and B; KEGG: cau:Caur_3249 peptidase C60 sortase A and B YP_002461524.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: cau:Caur_3250 DNA binding domain-containing protein YP_002461525.1 KEGG: cau:Caur_3252 hypothetical protein YP_002461526.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3253 glycosyl transferase group 1 YP_002461527.1 PFAM: conserved hypothetical protein; KEGG: cau:Caur_3254 hypothetical protein YP_002461528.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_3255 NAD-dependent epimerase/dehydratase YP_002461529.1 PFAM: O-antigen polymerase; KEGG: cau:Caur_3256 O-antigen polymerase YP_002461530.1 KEGG: cau:Caur_3257 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002461532.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: cau:Caur_3258 glutamate synthase (ferredoxin) YP_002461533.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: cau:Caur_3260 chaperone DnaJ domain-containing protein YP_002461534.1 KEGG: cau:Caur_0218 hypothetical protein YP_002461535.1 KEGG: cau:Caur_0217 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_002461536.1 KEGG: cau:Caur_0216 hypothetical protein YP_002461537.1 PFAM: response regulator receiver; KEGG: cau:Caur_0215 response regulator receiver YP_002461538.1 PFAM: protein of unknown function DUF422; KEGG: cau:Caur_0214 hypothetical protein YP_002461539.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: cau:Caur_0213 phospholipid/glycerol acyltransferase YP_002461540.1 KEGG: cau:Caur_0212 hypothetical protein YP_002461541.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: cau:Caur_0210 NifR3 family TIM-barrel protein YP_002461542.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: rca:Rcas_3651 IS605 family transposase OrfB YP_002461543.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002461544.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002461545.1 KEGG: cau:Caur_3652 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_002461546.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; SH3 type 3 domain protein; KEGG: cau:Caur_3651 SH3 type 3 domain-containing protein YP_002461547.1 KEGG: cau:Caur_3650 hypothetical protein YP_002461548.1 KEGG: cau:Caur_3649 hypothetical protein YP_002461549.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_3648 glycosyl transferase family protein YP_002461550.1 PFAM: conserved hypothetical protein; KEGG: cau:Caur_3647 hypothetical protein YP_002461551.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_3646 methyltransferase type 11 YP_002461552.1 PFAM: Asparaginase/glutaminase; KEGG: cau:Caur_3645 asparaginase/glutaminase YP_002461553.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_3644 ubiquinone/menaquinone biosynthesis methyltransferase YP_002461554.1 KEGG: cau:Caur_3643 hypothetical protein YP_002461555.1 PFAM: response regulator receiver; KEGG: cau:Caur_3642 response regulator-like protein YP_002461556.1 KEGG: cau:Caur_3714 hypothetical protein YP_002461557.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_3713 alpha/beta hydrolase fold-containing protein YP_002461558.1 KEGG: cau:Caur_3712 galactokinase; TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_002461559.1 KEGG: rrs:RoseRS_3253 hypothetical protein YP_002461560.1 KEGG: ana:all8062 unknown protein YP_002461561.1 KEGG: LOC761802; hypothetical protein LOC761802 YP_002461562.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_3136 EmrB/QacA family drug resistance transporter YP_002461563.1 PFAM: Patatin; KEGG: cau:Caur_3137 patatin YP_002461564.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cau:Caur_2732 ParB-like partition protein YP_002461565.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KR domain protein; KEGG: cau:Caur_2733 short-chain dehydrogenase/reductase SDR YP_002461566.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_2734 sulfate transporter/antisigma-factor antagonist STAS YP_002461567.1 KEGG: cau:Caur_2735 hypothetical protein YP_002461568.1 KEGG: cau:Caur_2751 hypothetical protein YP_002461569.1 KEGG: cau:Caur_2750 chromosome segregation ATPase-like protein YP_002461570.1 KEGG: rca:Rcas_2585 hypothetical protein YP_002461576.1 PFAM: protein of unknown function DUF1332; KEGG: cau:Caur_2749 hypothetical protein YP_002461577.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_002461578.1 KEGG: cau:Caur_2747 hypothetical protein YP_002461579.1 KEGG: cau:Caur_2746 secreted hydrolase-like protein YP_002461580.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cau:Caur_2745 cobalamin synthesis protein P47K YP_002461581.1 TIGRFAM: conserved repeat domain protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rrs:RoseRS_3776 peptidase S1 and S6, chymotrypsin/Hap YP_002461582.1 KEGG: cau:Caur_2750 chromosome segregation ATPase-like protein YP_002461583.1 TIGRFAM: conserved hypothetical protein; KEGG: cau:Caur_2739 hypothetical protein YP_002461584.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cau:Caur_3584 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002461585.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: cau:Caur_3583 RNA polymerase sigma factor RpoD YP_002461586.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cau:Caur_3582 acyl-CoA dehydrogenase domain-containing protein YP_002461587.1 ATP-dependent carboxylate-amine ligase YP_002461588.1 TIGRFAM: conserved hypothetical protein; SMART: von Willebrand factor type A; KEGG: cau:Caur_3409 hypothetical protein YP_002461589.1 PFAM: protein of unknown function DUF402; KEGG: cau:Caur_3410 hypothetical protein YP_002461590.1 PFAM: protein of unknown function DUF58; KEGG: cau:Caur_3411 hypothetical protein YP_002461591.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: cau:Caur_3412 ATPase YP_002461592.1 PFAM: protein of unknown function Spy-related; KEGG: cau:Caur_3413 hypothetical protein YP_002461593.1 KEGG: cau:Caur_3414 hypothetical protein YP_002461594.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: cau:Caur_3417 sec-independent protein translocase, TatC subunit YP_002461595.1 PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: cau:Caur_3418 sec-independent translocation protein MttA/Hcf106 YP_002461596.1 KEGG: cau:Caur_3364 hypothetical protein YP_002461597.1 KEGG: cau:Caur_3365 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_002461598.1 KEGG: cau:Caur_3366 hypothetical protein YP_002461599.1 KEGG: cau:Caur_3367 hypothetical protein YP_002461600.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys YP_002461601.1 PFAM: heat shock protein DnaJ domain protein; KEGG: cau:Caur_3389 heat shock protein DnaJ domain-containing protein YP_002461602.1 KEGG: cau:Caur_3388 hypothetical protein YP_002461603.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: cau:Caur_3654 isochorismate synthase YP_002461604.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: cau:Caur_3655 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YP_002461605.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: cau:Caur_3656 acetylornithine and succinylornithine aminotransferase YP_002461606.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002461607.1 PFAM: response regulator receiver; KEGG: cau:Caur_3461 response regulator receiver YP_002461608.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: cau:Caur_3462 ATP--cobalamin adenosyltransferase YP_002461609.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cau:Caur_3463 cation diffusion facilitator family transporter YP_002461610.1 KEGG: cau:Caur_3558 hypothetical protein YP_002461611.1 KEGG: cau:Caur_3559 hypothetical protein YP_002461612.1 KEGG: cau:Caur_3560 uncharacterized metal-binding protein-like protein YP_002461613.1 KEGG: ade:Adeh_2317 hypothetical protein YP_002461614.1 PFAM: AAA-4 family protein; KEGG: cau:Caur_3561 AAA-4 family protein YP_002461615.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cau:Caur_3562 tRNA/rRNA methyltransferase (SpoU) YP_002461616.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: cau:Caur_3378 ATPase domain-containing protein YP_002461617.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: cau:Caur_3377 response regulator receiver YP_002461618.1 KEGG: cau:Caur_3376 hypothetical protein YP_002461619.1 PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: cau:Caur_3375 serine/threonine protein kinase YP_002461620.1 KEGG: cau:Caur_3374 transcriptional regulator-like protein YP_002461621.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_3373 EmrB/QacA family drug resistance transporter YP_002461622.1 PFAM: regulatory protein MarR; KEGG: cau:Caur_3372 regulatory protein MarR YP_002461623.1 KEGG: cau:Caur_3371 magnesium chelatase, H subunit; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase YP_002461624.1 KEGG: cau:Caur_3370 hypothetical protein YP_002461625.1 KEGG: cau:Caur_3369 hypothetical protein YP_002461626.1 PFAM: protein of unknown function DUF55; KEGG: cau:Caur_3390 hypothetical protein YP_002461627.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_3391 response regulator receiver YP_002461628.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_3392 histidine kinase YP_002461629.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: cau:Caur_3393 SSS family solute/sodium (Na+) symporter YP_002461630.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase YP_002461631.1 KEGG: cau:Caur_3503 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002461632.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: cau:Caur_3502 phospholipid/glycerol acyltransferase YP_002461633.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_002461634.1 PFAM: aminoglycoside phosphotransferase; KEGG: cau:Caur_3500 aminoglycoside phosphotransferase YP_002461635.1 PFAM: glycine cleavage system P-protein; KEGG: cau:Caur_3499 glycine dehydrogenase (decarboxylating) YP_002461636.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: cau:Caur_3498 glycine cleavage system H protein YP_002461637.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: cau:Caur_3497 glycine cleavage system T protein YP_002461638.1 KEGG: cau:Caur_3496 hypothetical protein YP_002461639.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: cau:Caur_3556 glycoside hydrolase family protein YP_002461640.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_3555 glycosyl transferase family protein YP_002461641.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: cau:Caur_3445 sodium/hydrogen exchanger YP_002461642.1 PFAM: glycoside hydrolase family 35; glycoside hydrolase family 2 sugar binding; Glycoside hydrolase family 42 domain protein; KEGG: cau:Caur_3446 beta-galactosidase YP_002461643.1 PFAM: glycoside hydrolase family 31; KEGG: cau:Caur_3447 glycoside hydrolase family protein YP_002461644.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cau:Caur_3344 L-carnitine dehydratase/bile acid-inducible protein F YP_002461645.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Shikimate/quinate 5-dehydrogenase; KEGG: cau:Caur_3345 6-phosphogluconate dehydrogenase NAD-binding YP_002461646.1 KEGG: cau:Caur_3346 hypothetical protein YP_002461647.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_3347 GCN5-related N-acetyltransferase YP_002461648.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_002461649.1 KEGG: cau:Caur_3349 hypothetical protein YP_002461650.1 KEGG: cau:Caur_3350 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_002461651.1 PFAM: Phosphoglycerate mutase; KEGG: cau:Caur_3351 phosphoglycerate mutase YP_002461652.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_2734 sulfate transporter/antisigma-factor antagonist STAS YP_002461653.1 PFAM: creatinase; peptidase M24; KEGG: cau:Caur_3355 peptidase M24 YP_002461654.1 KEGG: cau:Caur_3356 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein YP_002461655.1 PFAM: Forkhead-associated protein; KEGG: cau:Caur_3357 forkhead-associated protein YP_002461657.1 KEGG: cau:Caur_3452 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_002461658.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cau:Caur_3449 ABC transporter related YP_002461659.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cau:Caur_3448 alanine racemase YP_002461660.1 PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2485 alpha/beta hydrolase fold YP_002461661.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rca:Rcas_2365 cobyrinic acid ac-diamide synthase YP_002461662.1 PFAM: Ppx/GppA phosphatase; KEGG: cau:Caur_3425 Ppx/GppA phosphatase YP_002461663.1 PFAM: ATP-cone domain protein; KEGG: cau:Caur_3424 ATP-cone domain-containing protein YP_002461664.1 KEGG: cau:Caur_3423 restriction endonuclease YP_002461665.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_3422 3-oxoacyl-(acyl-carrier-protein) reductase YP_002461666.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: cau:Caur_3421 acetyl-CoA carboxylase, biotin carboxylase YP_002461667.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cau:Caur_3420 transcription antitermination factor NusB YP_002461668.1 carries the fatty acid chain in fatty acid biosynthesis YP_002461669.1 KEGG: cau:Caur_2940 hypothetical protein YP_002461670.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_002461671.1 KEGG: cau:Caur_2942 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_002461672.1 KEGG: rca:Rcas_3651 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002461673.1 PFAM: protein of unknown function DUF58; KEGG: cau:Caur_3180 hypothetical protein YP_002461674.1 PFAM: cobalamin B12-binding domain protein; KEGG: mth:MTH124 hypothetical protein YP_002461675.1 PFAM: Cna B domain protein; KEGG: cau:Caur_3179 Cna B domain-containing protein YP_002461676.1 KEGG: cau:Caur_3178 hypothetical protein YP_002461677.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: cau:Caur_3186 6-phosphogluconate dehydrogenase NAD-binding YP_002461678.1 PFAM: oxidoreductase domain protein; SAF domain protein; KEGG: cau:Caur_3187 SAF domain-containing protein YP_002461679.1 KEGG: cau:Caur_3188 hypothetical protein YP_002461680.1 KEGG: cau:Caur_3189 hypothetical protein YP_002461681.1 KEGG: cau:Caur_3190 von Willebrand factor type A YP_002461682.1 PFAM: von Willebrand factor type A; protein of unknown function DUF1355; KEGG: cau:Caur_3191 von Willebrand factor type A YP_002461683.1 PFAM: beta-lactamase; KEGG: cau:Caur_3192 beta-lactamase YP_002461685.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: cau:Caur_3193 putative thiol-disulphide oxidoreductase DCC YP_002461686.1 PFAM: FAD dependent oxidoreductase; KEGG: LOC100059605; similar to L-pipecolic acid oxidase ; K00301 sarcosine oxidase YP_002461687.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_3195 NUDIX hydrolase YP_002461688.1 KEGG: cau:Caur_3196 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase YP_002461689.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: cau:Caur_3197 ribulose-phosphate 3-epimerase YP_002461690.1 KEGG: cau:Caur_3198 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase YP_002461691.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: cau:Caur_3199 peptidase M61 domain-containing protein YP_002461692.1 KEGG: cau:Caur_3130 hypothetical protein YP_002461693.1 PFAM: periplasmic binding protein; KEGG: cau:Caur_3129 periplasmic binding protein YP_002461694.1 KEGG: cau:Caur_3128 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: HpcH/HpaI aldolase; Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_002461695.1 KEGG: cau:Caur_3127 helix-hairpin-helix DNA-binding class 1; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; Competence protein ComEA helix-hairpin-helix region; SMART: Helix-hairpin-helix DNA-binding class 1 YP_002461696.1 KEGG: cau:Caur_3126 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_002461697.1 KEGG: cau:Caur_2914 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein YP_002461698.1 KEGG: cau:Caur_3676 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002461699.1 TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; KEGG: cau:Caur_3677 bacteriochlorophyll 4-vinyl reductase YP_002461700.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: cau:Caur_3678 hemolysin A YP_002461701.1 KEGG: cau:Caur_3679 hypothetical protein YP_002461702.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_3683 NUDIX hydrolase YP_002461703.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rca:Rcas_2949 cobalamin synthesis protein P47K YP_002461704.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rca:Rcas_2948 FmdB family regulatory protein YP_002461705.1 KEGG: hypothetical protein YP_002461706.1 PFAM: glutathione peroxidase; KEGG: cau:Caur_3684 glutathione peroxidase YP_002461707.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_2932 NUDIX hydrolase YP_002461708.1 KEGG: cau:Caur_2931 hypothetical protein YP_002461709.1 PFAM: blue (type 1) copper domain protein; KEGG: cau:Caur_3248 blue (type 1) copper domain protein YP_002461710.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cau:Caur_3247 pseudouridine synthase YP_002461711.1 KEGG: cau:Caur_3246 ATPase-like protein YP_002461712.1 PFAM: Septum formation initiator; KEGG: cau:Caur_3245 septum formation initiator YP_002461713.1 PFAM: protein of unknown function DUF583; KEGG: cau:Caur_3244 hypothetical protein YP_002461714.1 KEGG: rca:Rcas_1067 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002461715.1 KEGG: cau:Caur_3242 hypothetical protein YP_002461716.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3241 glycosyl transferase group 1 YP_002461717.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_3240 ABC transporter related YP_002461718.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3239 polar amino acid ABC transporter, inner membrane subunit YP_002461719.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3238 polar amino acid ABC transporter, inner membrane subunit YP_002461720.1 PFAM: extracellular solute-binding protein family 3; KEGG: cau:Caur_3237 extracellular solute-binding protein YP_002461721.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_3231 beta-lactamase domain-containing protein YP_002461722.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_3230 response regulator receiver YP_002461723.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_3229 histidine kinase dimerisation and phosphoacceptor region YP_002461724.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: cau:Caur_3228 chromosome segregation and condensation protein ScpA YP_002461725.1 KEGG: cau:Caur_3227 hypothetical protein YP_002461726.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: cau:Caur_3224 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002461727.1 KEGG: cau:Caur_3223 hypothetical protein YP_002461728.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cau:Caur_3222 rrf2 family transcriptional regulator YP_002461729.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: cau:Caur_3221 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_002461730.1 KEGG: cau:Caur_3220 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_002461731.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cau:Caur_3408 cyclic nucleotide-binding YP_002461732.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: cau:Caur_3407 acetylglutamate kinase YP_002461733.1 KEGG: cau:Caur_3406 hypothetical protein YP_002461734.1 KEGG: cau:Caur_3405 hypothetical protein YP_002461735.1 KEGG: cau:Caur_3404 hypothetical protein YP_002461736.1 PFAM: acriflavin resistance protein; KEGG: cau:Caur_3403 acriflavin resistance protein YP_002461737.1 PFAM: secretion protein HlyD family protein; KEGG: cau:Caur_3402 secretion protein HlyD family protein YP_002461738.1 PFAM: regulatory protein TetR; KEGG: cau:Caur_3401 regulatory protein TetR YP_002461739.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hau:Haur_5149 TPR repeat-containing protein YP_002461740.1 KEGG: cau:Caur_3550 glycosyl transferase group 1 YP_002461741.1 PFAM: FAD dependent oxidoreductase; KEGG: cau:Caur_3609 FAD dependent oxidoreductase YP_002461742.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_3611 ABC transporter related YP_002461743.1 KEGG: cau:Caur_3612 hypothetical protein YP_002461744.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: cau:Caur_3613 TrkA domain-containing protein YP_002461745.1 PFAM: nitroreductase; KEGG: cau:Caur_3614 nitroreductase YP_002461746.1 TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: cau:Caur_3615 F420-dependent oxidoreductase YP_002461747.1 KEGG: cau:Caur_3616 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_002461748.1 PFAM: TPR repeat-containing protein; transcriptional activator domain; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_3619 transcriptional activator domain-containing protein YP_002461749.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_3628 AMP-dependent synthetase and ligase YP_002461750.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_3629 alpha/beta hydrolase fold-containing protein YP_002461751.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_3630 alpha/beta hydrolase fold-containing protein YP_002461752.1 PFAM: MaoC domain protein dehydratase; KEGG: cau:Caur_3631 dehydratase YP_002461753.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cau:Caur_3632 enoyl-CoA hydratase/isomerase YP_002461754.1 KEGG: cau:Caur_3633 MaoC-like dehydratase YP_002461756.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: cau:Caur_3438 GHMP kinase YP_002461757.1 PFAM: histone deacetylase superfamily; KEGG: cau:Caur_3437 histone deacetylase superfamily protein YP_002461758.1 PFAM: Abortive infection protein; KEGG: cau:Caur_3436 abortive infection protein YP_002461759.1 KEGG: ttj:TTHB127 arsenite oxidase, large subunit; TIGRFAM: arsenite oxidase, large subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_002461760.1 TIGRFAM: arsenite oxidase, small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: ttj:TTHB128 arsenite oxidase, small subunit YP_002461761.1 PFAM: carboxyl transferase; KEGG: cau:Caur_3435 propionyl-CoA carboxylase YP_002461762.1 PFAM: sodium pump decarboxylase gamma subunit; KEGG: cau:Caur_3434 sodium pump decarboxylase gamma subunit YP_002461763.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cau:Caur_3433 biotin/lipoyl attachment domain-containing protein YP_002461764.1 KEGG: cau:Caur_3432 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit YP_002461765.1 PFAM: CBS domain containing protein; KEGG: cau:Caur_3428 CBS domain-containing protein YP_002461767.1 PFAM: aminotransferase class I and II; KEGG: tle:Tlet_2009 glycine C-acetyltransferase YP_002461768.1 phytyltransferase acting specifically in the tocopherol biosynthetic pathway; member of the UbiA prenyltransferase family which catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin YP_002461769.1 PFAM: UbiA prenyltransferase; KEGG: cau:Caur_3426 UbiA prenyltransferase YP_002461770.1 KEGG: cau:Caur_3341 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002461771.1 KEGG: cau:Caur_3340 hypothetical protein YP_002461772.1 KEGG: cau:Caur_3034 major facilitator superfamily permease YP_002461773.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3736 integral membrane sensor signal transduction histidine kinase YP_002461774.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_1504 two component transcriptional regulator YP_002461775.1 KEGG: rrs:RoseRS_3738 hypothetical protein YP_002461776.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: cau:Caur_3165 transcriptional coactivator/pterin dehydratase YP_002461777.1 PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: cau:Caur_3164 alpha/beta hydrolase fold-containing protein YP_002461778.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cau:Caur_3163 acyl-CoA dehydrogenase domain-containing protein YP_002461779.1 PFAM: Phosphoglycerate mutase; KEGG: cau:Caur_3162 phosphoglycerate mutase YP_002461780.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: cau:Caur_3161 phosphoenolpyruvate carboxylase YP_002461781.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: cau:Caur_3160 SUA5/YciO/YrdC/YwlC family protein YP_002461782.1 SMART: WD-40 repeat protein; KEGG: cau:Caur_3157 WD-40 repeat-containing protein YP_002461783.1 PFAM: putative esterase; KEGG: cau:Caur_3156 putative esterase YP_002461784.1 KEGG: cau:Caur_3155 hypothetical protein YP_002461785.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3154 binding-protein-dependent transport systems inner membrane component YP_002461786.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3153 binding-protein-dependent transport systems inner membrane component YP_002461787.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_3152 extracellular solute-binding protein YP_002461788.1 KEGG: LOC607769; similar to keratinocytes proline-rich protein YP_002461789.1 KEGG: cau:Caur_3540 hypothetical protein YP_002461790.1 KEGG: cau:Caur_3541 hypothetical protein YP_002461791.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_3543 sulfate transporter/antisigma-factor antagonist STAS YP_002461792.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: cau:Caur_3547 electron transfer flavoprotein alpha subunit YP_002461793.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: cau:Caur_3546 electron transfer flavoprotein alpha/beta-subunit YP_002461794.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_3545 hypothetical protein YP_002461795.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis YP_002461796.1 KEGG: cau:Caur_3548 NHL repeat-containing protein YP_002461797.1 PFAM: protein of unknown function DUF540; KEGG: cau:Caur_3549 hypothetical protein YP_002461798.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3550 glycosyl transferase group 1 YP_002461799.1 KEGG: cau:Caur_3551 hypothetical protein YP_002461800.1 KEGG: cau:Caur_3552 hypothetical protein YP_002461801.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cau:Caur_3512 major facilitator transporter YP_002461802.1 PFAM: regulatory protein TetR; KEGG: cau:Caur_3513 regulatory protein TetR YP_002461803.1 KEGG: cau:Caur_3395 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_002461804.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cau:Caur_3084 DEAD/DEAH box helicase domain-containing protein YP_002461805.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: cau:Caur_3083 diguanylate cyclase YP_002461806.1 KEGG: cau:Caur_3078 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_002461807.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: cau:Caur_3075 thiamine pyrophosphokinase YP_002461808.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cau:Caur_3074 lysine exporter protein LysE/YggA YP_002461809.1 TIGRFAM: glycogen synthase; PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3073 glycogen synthase YP_002461810.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_3870 inner-membrane translocator YP_002461811.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_3871 inner-membrane translocator YP_002461812.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_3872 ABC transporter related YP_002461813.1 PFAM: basic membrane lipoprotein; KEGG: cau:Caur_3873 basic membrane lipoprotein YP_002461814.1 amylomaltase; acts to release glucose from maltodextrins YP_002461815.1 KEGG: cau:Caur_3876 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: AAA ATPase YP_002461816.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_002461817.1 PFAM: FAD dependent oxidoreductase; KEGG: cau:Caur_3880 FAD dependent oxidoreductase YP_002461818.1 KEGG: lch:Lcho_4287 hypothetical protein YP_002461819.1 PFAM: beta-lactamase; KEGG: cau:Caur_3881 beta-lactamase YP_002461820.1 KEGG: cau:Caur_3882 biotin/lipoate A/B protein ligase YP_002461821.1 KEGG: cau:Caur_3883 hypothetical protein YP_002461822.1 KEGG: cau:Caur_3884 hypothetical protein YP_002461823.1 KEGG: cau:Caur_3885 hypothetical protein YP_002461824.1 PFAM: metallophosphoesterase; KEGG: cau:Caur_3886 metallophosphoesterase YP_002461825.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_3887 histidine kinase YP_002461826.1 PFAM: glutathione peroxidase; KEGG: cau:Caur_2787 glutathione peroxidase YP_002461828.1 KEGG: rrs:RoseRS_4365 glyoxalase/bleomycin resistance protein/dioxygenase YP_002461829.1 KEGG: plu:plu0599 hypothetical protein YP_002461830.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: tbd:Tbd_1812 T/G mismatch-specific endonuclease YP_002461831.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: cmi:CMM_0574 putative cytosine-specific DNA methylase YP_002461832.1 KEGG: tle:Tlet_1198 hypothetical protein YP_002461834.1 KEGG: rca:Rcas_4140 hypothetical protein YP_002461835.1 KEGG: rrs:RoseRS_3366 hypothetical protein YP_002461836.1 PFAM: Abortive infection protein; KEGG: rca:Rcas_2103 abortive infection protein YP_002461837.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_1889 beta-lactamase domain-containing protein YP_002461838.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: emi:Emin_0855 HNH endonuclease YP_002461840.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_2233 GCN5-related N-acetyltransferase YP_002461841.1 KEGG: rca:Rcas_2234 peptidase M23B YP_002461842.1 KEGG: ppd:Ppro_3668 hypothetical protein YP_002461843.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: cau:Caur_2776 (NiFe) hydrogenase maturation protein HypF YP_002461844.1 PFAM: protein of unknown function DUF1641; KEGG: cau:Caur_2775 hypothetical protein YP_002461845.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: cau:Caur_2774 hydrogenase nickel insertion protein HypA YP_002461846.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: cau:Caur_2773 hydrogenase accessory protein HypB YP_002461847.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cau:Caur_2771 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002461848.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: cau:Caur_2770 nickel-dependent hydrogenase large subunit YP_002461849.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: cau:Caur_2769 hydrogenase maturation protease YP_002461850.1 KEGG: cau:Caur_2768 hydrogenase maturation protease YP_002461851.1 KEGG: cau:Caur_2767 tetratricopeptide TPR_4 YP_002461852.1 KEGG: cau:Caur_2766 hypothetical protein YP_002461853.1 PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: cau:Caur_2765 Rieske (2Fe-2S) domain-containing protein YP_002461854.1 PFAM: NHL repeat containing protein; KEGG: cau:Caur_2764 NHL repeat-containing protein YP_002461855.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: cau:Caur_2763 hydrogenase assembly chaperone HypC/HupF YP_002461856.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: cau:Caur_2762 hydrogenase expression/formation protein HypD YP_002461857.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cau:Caur_2761 hydrogenase expression/formation protein HypE YP_002461858.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: cau:Caur_2759 leucyl-tRNA synthetase YP_002461859.1 KEGG: cau:Caur_2758 hypothetical protein YP_002461860.1 KEGG: cau:Caur_2757 hypothetical protein YP_002461861.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: cau:Caur_2756 ATPase domain-containing protein YP_002461862.1 KEGG: cau:Caur_2754 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002461863.1 PFAM: GAF domain protein; KEGG: cau:Caur_2753 GAF domain-containing protein YP_002461864.1 KEGG: cau:Caur_2752 hypothetical protein YP_002461865.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: cau:Caur_2736 chaperonin GroEL YP_002461866.1 PFAM: chaperonin Cpn10; KEGG: cau:Caur_2737 chaperonin Cpn10 YP_002461867.1 KEGG: cau:Caur_3586 putative secreted protein YP_002461868.1 PFAM: regulatory protein ArsR; KEGG: cau:Caur_3587 regulatory protein ArsR YP_002461870.1 TIGRFAM: phosphate binding protein; KEGG: cau:Caur_3588 phosphate binding protein YP_002461871.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_3589 histidine kinase YP_002461872.1 PFAM: response regulator receiver; KEGG: cau:Caur_3590 response regulator receiver YP_002461873.1 PFAM: UbiE/COQ5 methyltransferase; protein of unknown function DUF343; Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_3591 methyltransferase type 11 YP_002461874.1 KEGG: cau:Caur_3592 hypothetical protein YP_002461875.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: cau:Caur_3358 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002461876.1 PFAM: DoxX family protein; KEGG: cau:Caur_3030 DoxX family protein YP_002461877.1 PFAM: YceI family protein; KEGG: cau:Caur_3029 YceI family protein YP_002461878.1 PFAM: DSBA oxidoreductase; KEGG: cau:Caur_3028 DsbA oxidoreductase YP_002461879.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: cau:Caur_3027 protein-export membrane protein SecD YP_002461880.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: cau:Caur_3026 protein-export membrane protein SecF YP_002461881.1 PFAM: protein of unknown function DUF427; KEGG: cau:Caur_3205 hypothetical protein YP_002461882.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: cau:Caur_3206 DNA protecting protein DprA YP_002461883.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_3207 NUDIX hydrolase YP_002461884.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cau:Caur_3204 LysR substrate-binding YP_002461885.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Polysulphide reductase NrfD; KEGG: cau:Caur_3202 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002461886.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cau:Caur_3201 nitrate reductase YP_002461887.1 KEGG: cau:Caur_3200 uncharacterized component of anaerobic dehydrogenase-like protein YP_002461888.1 PFAM: extracellular solute-binding protein family 3; KEGG: cau:Caur_3172 extracellular solute-binding protein YP_002461889.1 PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cau:Caur_3171 ATPase central domain-containing protein YP_002461891.1 PFAM: nitroreductase; KEGG: cau:Caur_3170 nitroreductase YP_002461892.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: cau:Caur_3169 DNA binding domain-containing protein YP_002461893.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rca:Rcas_1543 PucC protein YP_002461894.1 PFAM: DSBA oxidoreductase; KEGG: cau:Caur_3166 DsbA oxidoreductase YP_002461895.1 PFAM: ABC-2 type transporter; KEGG: cau:Caur_3033 ABC-2 type transporter YP_002461896.1 PFAM: ABC-2 type transporter; KEGG: cau:Caur_3032 ABC-2 type transporter YP_002461897.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_3031 ABC transporter related YP_002461899.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cau:Caur_3564 redoxin domain-containing protein YP_002461900.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002461901.1 PFAM: ubiquitin-associated- domain-containing protein; Translation elongation factor EFTs/EF1B dimerisation; KEGG: cau:Caur_3566 translation elongation factor EFTs/EF1B dimerisation YP_002461902.1 Catalyzes the phosphorylation of UMP to UDP YP_002461903.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002461904.1 KEGG: cau:Caur_3569 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_002461905.1 PFAM: phosphatidate cytidylyltransferase; KEGG: cau:Caur_3570 phosphatidate cytidylyltransferase YP_002461906.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_3571 hypothetical protein YP_002461907.1 PFAM: alpha-L-rhamnosidase; KEGG: cau:Caur_3572 alpha-L-rhamnosidase YP_002461908.1 KEGG: cau:Caur_3573 hypothetical protein YP_002461909.1 PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: cau:Caur_3574 peptidase M50 YP_002461910.1 KEGG: cau:Caur_3575 hypothetical protein YP_002461911.1 PFAM: protein of unknown function DUF83; KEGG: cau:Caur_3576 hypothetical protein YP_002461912.1 KEGG: cau:Caur_3577 hypothetical protein YP_002461913.1 KEGG: cau:Caur_3578 hypothetical protein YP_002461914.1 PFAM: BioY protein; KEGG: cau:Caur_3579 BioY protein YP_002461915.1 PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: cau:Caur_3580 beta-lactamase domain-containing protein YP_002461916.1 KEGG: cau:Caur_3521 hypothetical protein YP_002461917.1 PFAM: ApbE family lipoprotein; KEGG: cau:Caur_3522 ApbE family lipoprotein YP_002461918.1 KEGG: cau:Caur_3523 hypothetical protein YP_002461919.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: cau:Caur_3524 peptidase YP_002461920.1 KEGG: cau:Caur_3525 hypothetical protein YP_002461921.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_3526 response regulator receiver YP_002461922.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Propeptide PepSY amd peptidase M4; KEGG: cau:Caur_3527 histidine kinase YP_002461923.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_002461924.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: cau:Caur_3530 3-beta hydroxysteroid dehydrogenase/isomerase YP_002461925.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis YP_002461926.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: cau:Caur_3532 oligopeptidase B YP_002461927.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_3533 haloalkane dehalogenase YP_002461928.1 KEGG: cau:Caur_3534 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002461929.1 PFAM: response regulator receiver; KEGG: cau:Caur_3535 response regulator receiver YP_002461930.1 KEGG: cau:Caur_3536 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002461931.1 KEGG: cau:Caur_3536 PAS sensor protein YP_002461932.1 KEGG: cau:Caur_3537 hypothetical protein YP_002461933.1 PFAM: peptidase M48 Ste24p; KEGG: pfl:PFL_2501 heat shock protein HtpX YP_002461934.1 PFAM: protein of unknown function DUF524; KEGG: cau:Caur_3538 hypothetical protein YP_002461935.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: cau:Caur_3539 magnesium and cobalt transport protein CorA YP_002461936.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_3363 GCN5-related N-acetyltransferase YP_002461937.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: cau:Caur_3362 aminotransferase class-III YP_002461938.1 PFAM: inositol monophosphatase; KEGG: cau:Caur_3360 inositol-phosphate phosphatase YP_002461939.1 KEGG: rca:Rcas_0080 hypothetical protein YP_002461940.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: cau:Caur_2953 CRISPR-associated Cas4 family protein YP_002461941.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: cau:Caur_2952 CRISPR-associated Cas2 family protein YP_002461942.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: cau:Caur_2951 CRISPR-associated Cas1 family protein YP_002461943.1 KEGG: cau:Caur_2950 hypothetical protein YP_002461944.1 KEGG: rca:Rcas_3301 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; metal-dependent phosphohydrolase HD sub domain; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_002461945.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: rrs:RoseRS_1867 CRISPR-associated Cas5 family protein YP_002461946.1 TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; KEGG: rca:Rcas_3299 CRISPR-associated autoregulator DevR family protein protein YP_002461947.1 TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; KEGG: rca:Rcas_3298 CRISPR-associated Cst1 family protein YP_002461948.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: cau:Caur_2945 helix-turn-helix type 11 domain-containing protein YP_002461949.1 KEGG: cau:Caur_2943 hypothetical protein YP_002461950.1 catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis YP_002461951.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cau:Caur_3515 cobyrinic acid ac-diamide synthase YP_002461952.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_3516 sulfate transporter/antisigma-factor antagonist STAS YP_002461953.1 KEGG: cau:Caur_3517 hypothetical protein YP_002461954.1 KEGG: cau:Caur_3518 hypothetical protein YP_002461955.1 KEGG: cau:Caur_3519 hypothetical protein YP_002461956.1 PFAM: ATP-NAD/AcoX kinase; KEGG: cau:Caur_3669 ATP-NAD/AcoX kinase YP_002461957.1 PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; peptidase S15; E3 binding domain protein; KEGG: cau:Caur_3670 biotin/lipoyl attachment domain-containing protein YP_002461958.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_3671 transketolase central region YP_002461959.1 PFAM: dehydrogenase E1 component; KEGG: cau:Caur_3672 pyruvate dehydrogenase (acetyl-transferring) YP_002461960.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cau:Caur_0044 phosphomannomutase YP_002461961.1 KEGG: cau:Caur_0043 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase YP_002461962.1 PFAM: cobalamin B12-binding domain protein; KEGG: cau:Caur_0042 cobalamin B12-binding domain-containing protein YP_002461963.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_002461964.1 KEGG: rrs:RoseRS_3321 hypothetical protein YP_002461965.1 PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: rca:Rcas_0060 transcriptional activator domain-containing protein YP_002461966.1 KEGG: cau:Caur_0039 hypothetical protein YP_002461967.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: cau:Caur_0038 hypothetical protein YP_002461968.1 KEGG: cau:Caur_0037 hypothetical protein YP_002461969.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: cau:Caur_0036 phospholipid/glycerol acyltransferase YP_002461970.1 KEGG: cau:Caur_0035 hypothetical protein YP_002461971.1 KEGG: cau:Caur_0034 hypothetical protein YP_002461972.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: cau:Caur_0033 methionyl-tRNA formyltransferase YP_002461973.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_0032 alcohol dehydrogenase YP_002461974.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: cau:Caur_0031 diguanylate cyclase YP_002461975.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_2828 TPR repeat-containing protein YP_002461976.1 KEGG: cau:Caur_2827 hypothetical protein YP_002461977.1 PFAM: protein of unknown function DUF323; KEGG: cau:Caur_2826 hypothetical protein YP_002461978.1 PFAM: SEC-C motif domain protein; KEGG: cau:Caur_2825 SecC motif-containing protein YP_002461979.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_2824 histidine kinase YP_002461980.1 PFAM: aromatic amino acid hydroxylase; KEGG: cau:Caur_2799 aromatic amino acid hydroxylase YP_002461981.1 PFAM: protein of unknown function DUF59; KEGG: cau:Caur_2798 hypothetical protein YP_002461982.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: cau:Caur_2797 YidE/YbjL duplication YP_002461983.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cau:Caur_2796 cobalamin synthesis protein P47K YP_002461984.1 KEGG: cau:Caur_2795 hypothetical protein YP_002461985.1 PFAM: ribosomal protein L28; KEGG: cau:Caur_2794 ribosomal protein L28 YP_002461986.1 KEGG: cau:Caur_2793 hypothetical protein YP_002461987.1 KEGG: cau:Caur_1497 hypothetical protein YP_002461988.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cau:Caur_2791 glyoxalase/bleomycin resistance protein/dioxygenase YP_002461989.1 KEGG: cau:Caur_3279 ATPase involved in chromosome partitioning-like protein YP_002461990.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_3278 short-chain dehydrogenase/reductase SDR YP_002461991.1 KEGG: cau:Caur_3277 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002461992.1 acts as a promotor non-specific transcription repressor YP_002461993.1 PFAM: KaiB domain protein; KEGG: cau:Caur_3275 KaiB domain-containing protein YP_002461994.1 KEGG: cau:Caur_3274 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002461995.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cau:Caur_3273 methionine gamma-lyase YP_002461996.1 PFAM: protein of unknown function DUF445; KEGG: cau:Caur_3272 hypothetical protein YP_002461997.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cau:Caur_3271 MscS mechanosensitive ion channel YP_002461998.1 PFAM: Abortive infection protein; KEGG: cau:Caur_3268 abortive infection protein YP_002461999.1 PFAM: protein of unknown function DUF1648; KEGG: cau:Caur_3267 hypothetical protein YP_002462000.1 PFAM: regulatory protein ArsR; KEGG: cau:Caur_3266 regulatory protein ArsR YP_002462001.1 KEGG: cau:Caur_3264 hypothetical protein YP_002462002.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_3263 alpha/beta hydrolase fold-containing protein YP_002462003.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_3262 short-chain dehydrogenase/reductase SDR YP_002462004.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: cau:Caur_3261 5'-nucleotidase domain-containing protein YP_002462005.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_2805 transketolase central region YP_002462006.1 KEGG: bba:Bd2649 hypothetical protein YP_002462008.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: cau:Caur_2804 phosphoribulokinase/uridine kinase YP_002462009.1 KEGG: cau:Caur_2803 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_002462010.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_2802 short-chain dehydrogenase/reductase SDR YP_002462011.1 KEGG: cau:Caur_2801 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_002462012.1 PFAM: SCP-like extracellular; KEGG: cau:Caur_2800 SCP-like extracellular YP_002462013.1 KEGG: cau:Caur_2823 PT repeat-containing protein YP_002462014.1 KEGG: cau:Caur_2822 hypothetical protein YP_002462015.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_002462016.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_002462017.1 KEGG: cau:Caur_2819 alpha/beta hydrolase fold-containing protein YP_002462018.1 PFAM: peptidase S14 ClpP; KEGG: cau:Caur_2818 endopeptidase Clp YP_002462019.1 KEGG: cau:Caur_2816 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002462020.1 PFAM: response regulator receiver; KEGG: cau:Caur_2815 response regulator receiver YP_002462021.1 KEGG: cau:Caur_2814 hypothetical protein YP_002462022.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cau:Caur_2813 CDP-alcohol phosphatidyltransferase YP_002462023.1 KEGG: cau:Caur_3674 hypothetical protein YP_002462024.1 PFAM: SNARE associated Golgi protein; KEGG: cau:Caur_3675 SNARE associated Golgi protein YP_002462025.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_002462026.1 PFAM: O-antigen polymerase; KEGG: cau:Caur_3318 O-antigen polymerase YP_002462027.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_002462028.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: cau:Caur_3316 methyltransferase type 11 YP_002462029.1 PFAM: thioesterase superfamily protein; KEGG: cau:Caur_3315 thioesterase superfamily protein YP_002462030.1 PFAM: protein of unknown function DUF990; KEGG: cau:Caur_3314 hypothetical protein YP_002462031.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_3312 ABC transporter related YP_002462032.1 KEGG: cau:Caur_3311 alpha/beta hydrolase fold-containing protein YP_002462033.1 PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: cau:Caur_3310 shikimate/quinate 5-dehydrogenase YP_002462034.1 KEGG: cau:Caur_0206 hypothetical protein YP_002462035.1 PFAM: Thioredoxin domain; KEGG: cau:Caur_0205 thioredoxin domain-containing protein YP_002462036.1 catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO) YP_002462037.1 PFAM: protein of unknown function DUF121; KEGG: cau:Caur_0203 hypothetical protein YP_002462038.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: cau:Caur_0202 transporter DMT superfamily protein YP_002462039.1 PFAM: regulator of chromosome condensation RCC1; KEGG: rca:Rcas_0264 regulator of chromosome condensation RCC1 YP_002462040.1 PFAM: regulator of chromosome condensation RCC1; KEGG: rca:Rcas_0264 regulator of chromosome condensation RCC1 YP_002462041.1 PFAM: regulator of chromosome condensation RCC1; KEGG: rca:Rcas_0264 regulator of chromosome condensation RCC1 YP_002462042.1 KEGG: cau:Caur_0199 hypothetical protein YP_002462043.1 KEGG: cau:Caur_3842 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_002462044.1 PFAM: ribosomal protein L25; KEGG: cau:Caur_3843 ribosomal protein L25 YP_002462045.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_3844 glycosyl transferase family protein YP_002462046.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rrs:RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase YP_002462047.1 KEGG: amr:AM1_B0305 hypothetical protein YP_002462049.1 KEGG:. YP_002462050.1 PFAM: Fibronectin type III domain protein; SMART: Pyrrolo-quinoline quinone; LamG domain protein jellyroll fold domain protein; KEGG: rrs:RoseRS_1016 thrombospondin type 3 repeat-containing protein YP_002462051.1 KEGG: cau:Caur_0719 hypothetical protein YP_002462052.1 PFAM: helix-turn-helix domain protein; NB-ARC domain protein; Tetratricopeptide TPR_4; KEGG: cau:Caur_0718 helix-turn-helix domain-containing protein YP_002462053.1 KEGG: hsl:OE8033R transposase (ISH4) YP_002462055.1 KEGG: LOC715384; hypothetical protein LOC715384 YP_002462058.1 KEGG: rrs:RoseRS_1021 hypothetical protein YP_002462059.1 KEGG: rrs:RoseRS_1021 hypothetical protein YP_002462060.1 KEGG: rrs:RoseRS_1020 hypothetical protein YP_002462062.1 KEGG: ava:Ava_2182 hypothetical protein YP_002462063.1 KEGG: rca:Rcas_1612 hypothetical protein YP_002462064.1 PFAM: protein of unknown function DUF1501; KEGG: cau:Caur_3308 hypothetical protein YP_002462065.1 KEGG: cau:Caur_3307 hypothetical protein YP_002462066.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: cau:Caur_3305 agmatine deiminase YP_002462067.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cau:Caur_3304 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_002462068.1 PFAM: AIG2 family protein; KEGG: cau:Caur_3303 AIG2 family protein YP_002462069.1 PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_3302 luciferase family protein YP_002462070.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_3301 major facilitator transporter YP_002462071.1 PFAM: lipolytic protein G-D-S-L family; KEGG: cau:Caur_3300 GDSL family lipase YP_002462072.1 PFAM: sugar fermentation stimulation protein; KEGG: cau:Caur_3299 sugar fermentation stimulation protein YP_002462073.1 KEGG: rca:Rcas_0264 regulator of chromosome condensation RCC1 YP_002462074.1 PFAM: aminoglycoside phosphotransferase; KEGG: cau:Caur_3298 aminoglycoside phosphotransferase YP_002462075.1 PFAM: alpha-2-macroglobulin domain protein; KEGG: cau:Caur_3297 alpha-2-macroglobulin domain-containing protein YP_002462076.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cno:NT01CX_0802 ribosomal-protein (S5)-alanine N-acetyltransferase YP_002462077.1 KEGG: cau:Caur_3072 glycosyl hydrolase 53 protein YP_002462078.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: cau:Caur_2692 isoleucyl-tRNA synthetase YP_002462079.1 KEGG: cau:Caur_2682 hypothetical protein YP_002462080.1 KEGG: rrs:RoseRS_0127 hypothetical protein YP_002462081.1 PFAM: peptidase C14 caspase catalytic subunit p20; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0128 peptidase C14, caspase catalytic subunit P20 YP_002462082.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_002462083.1 PFAM: von Willebrand factor type A; KEGG: cau:Caur_2680 von Willebrand factor type A YP_002462084.1 KEGG: cau:Caur_2679 hypothetical protein YP_002462085.1 KEGG: cau:Caur_2678 hypothetical protein YP_002462086.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P YP_002462087.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_2676 binding-protein-dependent transport systems inner membrane component YP_002462088.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_2675 binding-protein-dependent transport systems inner membrane component YP_002462089.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_2674 extracellular solute-binding protein YP_002462091.1 PFAM: regulatory protein MarR; KEGG: cau:Caur_2673 regulatory protein MarR YP_002462092.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rca:Rcas_4358 major facilitator transporter YP_002462093.1 KEGG: cau:Caur_2669 hypothetical protein YP_002462094.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: cau:Caur_2668 type I phosphodiesterase/nucleotide pyrophosphatase YP_002462095.1 PFAM: phosphatidate cytidylyltransferase; KEGG: cau:Caur_2667 phosphatidate cytidylyltransferase YP_002462096.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_2666 sulfate transporter/antisigma-factor antagonist STAS YP_002462097.1 PFAM: ATP-binding region ATPase domain protein; KEGG: cau:Caur_2665 ATPase domain-containing protein YP_002462098.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002462099.1 KEGG: rca:Rcas_3651 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002462100.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cau:Caur_2664 iron-containing alcohol dehydrogenase YP_002462101.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cau:Caur_2663 acyl-CoA dehydrogenase domain-containing protein YP_002462102.1 PFAM: regulatory protein ArsR; KEGG: rca:Rcas_2372 ArsR family transcriptional regulator YP_002462103.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rca:Rcas_2371 sulphate transporter YP_002462104.1 KEGG: cau:Caur_2662 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_002462105.1 KEGG: cau:Caur_2661 hypothetical protein YP_002462106.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_2660 methyltransferase type 11 YP_002462107.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_2659 short-chain dehydrogenase/reductase SDR YP_002462108.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cau:Caur_2658 metal dependent phophohydrolase YP_002462109.1 PFAM: protein of unknown function UPF0118; KEGG: cau:Caur_2657 hypothetical protein YP_002462110.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: cau:Caur_2656 helix-turn-helix domain-containing protein YP_002462111.1 PFAM: Forkhead-associated protein; ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: cau:Caur_2655 ABC transporter related YP_002462112.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_2654 protein phosphatase 2C-like protein YP_002462113.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_2653 protein phosphatase 2C-like protein YP_002462114.1 PFAM: tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_2652 protein kinase YP_002462115.1 PFAM: von Willebrand factor type A; KEGG: cau:Caur_2651 von Willebrand factor type A YP_002462116.1 PFAM: Forkhead-associated protein; KEGG: cau:Caur_2650 forkhead-associated protein YP_002462117.1 KEGG: cau:Caur_0186 hypothetical protein YP_002462118.1 PFAM: VWA containing CoxE family protein; KEGG: cau:Caur_2812 VWA containing CoxE family protein YP_002462119.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cau:Caur_2811 ATPase YP_002462120.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cau:Caur_2810 HAD family hydrolase YP_002462121.1 PFAM: peptidase C1A papain; KEGG: cau:Caur_2927 peptidase C1A papain YP_002462122.1 TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; KEGG: cau:Caur_2926 inosine guanosine and xanthosine phosphorylase family protein YP_002462123.1 PFAM: membrane-flanked domain; KEGG: cau:Caur_2925 membrane-flanked domain-containing protein YP_002462124.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: cau:Caur_2924 DNA repair protein RecO YP_002462125.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: cau:Caur_2923 chromosome segregation protein SMC YP_002462126.1 KEGG: cau:Caur_2922 hypothetical protein YP_002462127.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_002462128.1 PFAM: shikimate kinase; KEGG: cau:Caur_3124 shikimate kinase YP_002462129.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_3123 major facilitator transporter YP_002462130.1 catalyzes the hydrolysis of acylphosphate YP_002462131.1 PFAM: conserved hypothetical protein; KEGG: cau:Caur_3594 hypothetical protein YP_002462132.1 PFAM: cyclic nucleotide-binding; KEGG: cau:Caur_3595 cyclic nucleotide-binding YP_002462133.1 PFAM: transglutaminase domain protein; KEGG: cau:Caur_3597 transglutaminase domain-containing protein YP_002462134.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: cau:Caur_3598 TatD family hydrolase YP_002462135.1 KEGG: cau:Caur_3599 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002462136.1 PFAM: UspA domain protein; KEGG: cau:Caur_3602 UspA domain-containing protein YP_002462137.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase YP_002462138.1 KEGG: cau:Caur_3604 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_002462139.1 KEGG: cau:Caur_3605 hypothetical protein YP_002462140.1 KEGG: cau:Caur_3606 hypothetical protein YP_002462141.1 PFAM: histidine triad (HIT) protein; KEGG: cau:Caur_3607 histidine triad (HIT) protein YP_002462142.1 PFAM: conserved hypothetical protein; KEGG: cau:Caur_3608 hypothetical protein YP_002462143.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: cau:Caur_3397 peptidase S8 and S53 subtilisin kexin sedolisin YP_002462144.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: cau:Caur_3396 hemolysin III family channel protein YP_002462145.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: cau:Caur_3514 diguanylate cyclase YP_002462146.1 PFAM: peptidase S45 penicillin amidase; KEGG: rca:Rcas_1469 peptidase S45 penicillin amidase YP_002462147.1 KEGG: cau:Caur_3749 hypothetical protein YP_002462148.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: cau:Caur_3750 GHMP kinase YP_002462149.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: cau:Caur_3751 histidinol-phosphate phosphatase family protein YP_002462150.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cau:Caur_3752 RND family efflux transporter MFP subunit YP_002462151.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: cau:Caur_3753 lipopolysaccharide biosynthesis protein YP_002462152.1 KEGG: cau:Caur_3754 hypothetical protein YP_002462153.1 KEGG: cau:Caur_3755 hypothetical protein YP_002462154.1 KEGG: cau:Caur_3756 membrane protein-like protein YP_002462155.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3757 glycosyl transferase group 1 YP_002462156.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cau:Caur_3758 polysaccharide biosynthesis protein YP_002462157.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3759 glycosyl transferase group 1 YP_002462158.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_3760 glycosyl transferase family protein YP_002462159.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3761 glycosyl transferase group 1 YP_002462160.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3762 glycosyl transferase group 1 YP_002462161.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_3763 glycosyl transferase family protein YP_002462162.1 PFAM: O-antigen polymerase; KEGG: cau:Caur_3764 O-antigen polymerase YP_002462163.1 KEGG: cau:Caur_3765 glycosyl hydrolase BNR repeat-containing glycosyl hydrolase YP_002462164.1 KEGG: cau:Caur_3766 hypothetical protein YP_002462165.1 PFAM: Pyrrolo-quinoline quinone; KEGG: rrs:RoseRS_4237 pyrrolo-quinoline quinone YP_002462166.1 KEGG: cau:Caur_3768 hypothetical protein YP_002462167.1 KEGG: cau:Caur_3769 laminin G, domain-containing 2 YP_002462168.1 KEGG: cau:Caur_3770 laminin G, domain-containing 2 YP_002462169.1 KEGG: cau:Caur_3771 laminin G YP_002462170.1 KEGG: cau:Caur_3772 hypothetical protein YP_002462171.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: cau:Caur_3773 short-chain dehydrogenase/reductase SDR YP_002462172.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_3774 AMP-dependent synthetase and ligase YP_002462173.1 KEGG: cau:Caur_3775 hypothetical protein YP_002462174.1 KEGG: cau:Caur_3776 hexapaptide repeat-containing transferase YP_002462175.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cau:Caur_3777 UDP-N-acetylglucosamine 2-epimerase YP_002462176.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cau:Caur_3778 hexapaptide repeat-containing transferase YP_002462177.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_3779 glycosyl transferase family protein YP_002462178.1 KEGG: cau:Caur_3780 hypothetical protein YP_002462179.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cau:Caur_3781 radical SAM domain-containing protein YP_002462180.1 KEGG: cau:Caur_3782 4-amino-4-deoxy-L-arabinose transferase-like protein YP_002462181.1 KEGG: cau:Caur_3783 hypothetical protein YP_002462182.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3784 glycosyl transferase group 1 YP_002462183.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3785 glycosyl transferase group 1 YP_002462184.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_3786 glycosyl transferase family protein YP_002462185.1 KEGG: cau:Caur_3787 hypothetical protein YP_002462186.1 KEGG: cau:Caur_3788 sugar isomerase (SIS) YP_002462187.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cau:Caur_3789 glutamine--scyllo-inositol transaminase YP_002462188.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_3790 hypothetical protein YP_002462189.1 KEGG: cau:Caur_3791 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002462190.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cau:Caur_3792 oxidoreductase domain-containing protein YP_002462191.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_3793 AMP-dependent synthetase and ligase YP_002462192.1 KEGG: cau:Caur_3794 hypothetical protein YP_002462193.1 PFAM: protein of unknown function DUF344; KEGG: cau:Caur_3795 hypothetical protein YP_002462194.1 KEGG: cau:Caur_0528 PAS sensor protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002462195.1 KEGG: cau:Caur_0528 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002462196.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: aeh:Mlg_1802 GAF sensor signal transduction histidine kinase YP_002462197.1 KEGG: cau:Caur_3796 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002462198.1 PFAM: response regulator receiver; KEGG: cau:Caur_3797 response regulator receiver YP_002462199.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; KEGG: cau:Caur_3798 diguanylate cyclase YP_002462200.1 PFAM: response regulator receiver; Cobyrinic acid ac-diamide synthase; KEGG: cau:Caur_3799 response regulator receiver YP_002462201.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002462202.1 KEGG: cau:Caur_3800 hypothetical protein YP_002462203.1 PFAM: metallophosphoesterase; KEGG: cau:Caur_3801 metallophosphoesterase YP_002462204.1 PFAM: aminotransferase class-III; KEGG: cau:Caur_3802 aminotransferase class-III YP_002462205.1 KEGG: cau:Caur_3803 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_002462206.1 PFAM: integrase family protein; KEGG: cau:Caur_3804 integrase family protein YP_002462207.1 TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: cau:Caur_3805 chlorophyllide reductase subunit Y YP_002462208.1 TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: cau:Caur_3806 chlorophyllide reductase subunit Z YP_002462209.1 PFAM: Survival protein SurE; KEGG: cau:Caur_3807 stationary-phase survival protein SurE YP_002462210.1 KEGG: rrs:RoseRS_2584 hypothetical protein YP_002462211.1 KEGG: hau:Haur_5156 hypothetical protein YP_002462212.1 KEGG: cau:Caur_3094 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_002462213.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cau:Caur_3093 metal-dependent phosphohydrolase YP_002462214.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: cau:Caur_3092 RpiB/LacA/LacB family sugar-phosphate isomerase YP_002462215.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_3091 short-chain dehydrogenase/reductase SDR YP_002462216.1 KEGG: gme:Gmet_3477 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002462217.1 PFAM: response regulator receiver; KEGG: rrs:RoseRS_3357 response regulator receiver protein YP_002462218.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cau:Caur_3090 metal dependent phophohydrolase YP_002462219.1 KEGG: cau:Caur_3089 hypothetical protein YP_002462220.1 KEGG: cau:Caur_3088 hypothetical protein YP_002462221.1 converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines YP_002462222.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_3086 glycosyl transferase family protein YP_002462223.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_002462225.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: cau:Caur_3505 deoxyribodipyrimidine photo-lyase YP_002462226.1 KEGG: cau:Caur_3506 hypothetical protein YP_002462227.1 KEGG: cau:Caur_3507 peptidase M9A collagenase domain-containing protein YP_002462228.1 PFAM: protein of unknown function DUF1232; KEGG: mca:MCA1269 hypothetical protein YP_002462229.1 PFAM: peptidase T2 asparaginase 2; KEGG: cau:Caur_3511 asparaginase YP_002462232.1 SMART: LamG domain protein jellyroll fold domain protein; KEGG: rca:Rcas_2574 LamG domain-containing protein YP_002462233.1 KEGG: similar to hedgehog protein YP_002462234.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3444 glycosyl transferase group 1 YP_002462235.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3443 glycosyl transferase group 1 YP_002462236.1 KEGG: cau:Caur_3442 hypothetical protein YP_002462237.1 KEGG: cau:Caur_3441 hypothetical protein YP_002462238.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_3440 methyltransferase type 11 YP_002462239.1 KEGG: cau:Caur_3439 hypothetical protein YP_002462240.1 KEGG: cau:Caur_3720 hypothetical protein YP_002462241.1 KEGG: similar to hedgehog protein YP_002462242.1 KEGG: rca:Rcas_2131 hypothetical protein YP_002462244.1 PFAM: ABC transporter related; ABC transporter, conserved site; SMART: AAA ATPase; KEGG: cau:Caur_3721 ABC transporter related YP_002462245.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_3722 binding-protein-dependent transport systems inner membrane component YP_002462246.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: cau:Caur_3724 magnesium transporter YP_002462247.1 PFAM: SCP-like extracellular; KEGG: cau:Caur_1563 SCP-like extracellular YP_002462249.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cau:Caur_3747 heavy metal translocating P-type ATPase YP_002462250.1 PFAM: transcriptional regulator TrmB; KEGG: cau:Caur_3747 heavy metal translocating P-type ATPase YP_002462251.1 PFAM: dienelactone hydrolase; KEGG: cau:Caur_3746 dienelactone hydrolase YP_002462252.1 KEGG: cau:Caur_3744 putative transmembrane anti-sigma factor YP_002462253.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_3743 sigma-70 family RNA polymerase sigma factor YP_002462254.1 PFAM: Polyprenyl synthetase; KEGG: cau:Caur_3742 polyprenyl synthetase YP_002462255.1 KEGG: cau:Caur_0594 transcriptional regulator domain-containing protein YP_002462256.1 KEGG: rrs:RoseRS_0238 hypothetical protein YP_002462257.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_3185 sulfate transporter/antisigma-factor antagonist STAS YP_002462258.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_3184 short-chain dehydrogenase/reductase SDR YP_002462259.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: cau:Caur_3183 sigma-70 family RNA polymerase sigma factor YP_002462260.1 amylomaltase; acts to release glucose from maltodextrins YP_002462261.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cau:Caur_2939 arginase YP_002462262.1 KEGG: cau:Caur_2938 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase YP_002462263.1 PFAM: Phosphoglycerate mutase; KEGG: cau:Caur_2937 phosphoglycerate mutase YP_002462264.1 PFAM: Silent information regulator protein Sir2; KEGG: cau:Caur_2936 silent information regulator protein Sir2 YP_002462265.1 KEGG: cau:Caur_2935 hypothetical protein YP_002462266.1 PFAM: PspC domain protein; KEGG: cau:Caur_2934 PspC domain-containing protein YP_002462267.1 PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: cau:Caur_2933 fructosamine kinase YP_002462268.1 KEGG: cau:Caur_3740 hypothetical protein YP_002462269.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cau:Caur_3739 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002462270.1 KEGG: cau:Caur_3738 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_002462271.1 PFAM: Exonuclease VII small subunit; KEGG: cau:Caur_3737 exonuclease VII small subunit YP_002462272.1 KEGG: cau:Caur_3736 hypothetical protein YP_002462273.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: cau:Caur_3735 endoribonuclease L-PSP YP_002462274.1 KEGG: cau:Caur_3734 hypothetical protein YP_002462275.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: cau:Caur_3733 polysaccharide biosynthesis protein YP_002462278.1 PFAM: WD40 domain protein beta Propeller; KEGG: cau:Caur_3823 WD40 domain-containing protein YP_002462279.1 PFAM: WD40 domain protein beta Propeller; KEGG: cau:Caur_3823 WD40 domain-containing protein YP_002462280.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cau:Caur_3824 hypothetical protein YP_002462281.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002462282.1 PFAM: peptidase M50; KEGG: cau:Caur_3826 peptidase M50 YP_002462283.1 KEGG: cau:Caur_3827 hypothetical protein YP_002462284.1 PFAM: protein of unknown function UPF0102; KEGG: cau:Caur_2698 hypothetical protein YP_002462285.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: cau:Caur_2697 HNH endonuclease YP_002462286.1 KEGG: cau:Caur_2696 spermidine synthase-like protein YP_002462287.1 PFAM: protein of unknown function YGGT; KEGG: cau:Caur_2695 protein of unknown function YGGT YP_002462288.1 PFAM: histidinol dehydrogenase; KEGG: cau:Caur_2694 histidinol dehydrogenase YP_002462289.1 KEGG: cau:Caur_2693 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein YP_002462290.1 KEGG: cau:Caur_2683 hypothetical protein YP_002462291.1 PFAM: Squalene/phytoene synthase; KEGG: cau:Caur_2684 squalene/phytoene synthase YP_002462292.1 PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; KEGG: cau:Caur_2685 regulatory protein MerR YP_002462293.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_2686 NAD-dependent epimerase/dehydratase YP_002462294.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: cau:Caur_2687 nucleotidyl transferase YP_002462295.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: cau:Caur_2688 large conductance mechanosensitive channel protein YP_002462296.1 KEGG: cau:Caur_2689 hypothetical protein YP_002462297.1 PFAM: UspA domain protein; KEGG: cau:Caur_2690 UspA domain-containing protein YP_002462298.1 TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; Miro domain protein; KEGG: cau:Caur_2691 small GTP-binding protein YP_002462300.1 PFAM: regulatory protein ArsR; KEGG: cau:Caur_3494 regulatory protein ArsR YP_002462301.1 KEGG: fre:Franean1_5983 PGAP1 family protein YP_002462302.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: cau:Caur_3493 oxidoreductase domain-containing protein YP_002462303.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: cau:Caur_3492 UBA/ThiF-type NAD/FAD binding protein YP_002462304.1 PFAM: thiamineS protein; KEGG: cau:Caur_3491 thiamineS protein YP_002462305.1 SMART: Mov34/MPN/PAD-1 family protein; KEGG: cau:Caur_3490 Mov34/MPN/PAD-1 family protein YP_002462306.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cau:Caur_3489 cysteine synthase YP_002462307.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: cau:Caur_3488 NifU domain-containing protein YP_002462308.1 PFAM: Rhodanese domain protein; KEGG: cau:Caur_3487 rhodanese domain-containing protein YP_002462309.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: cau:Caur_3486 Rieske (2Fe-2S) domain-containing protein YP_002462310.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: cau:Caur_3485 FeS assembly protein SufB YP_002462311.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: cau:Caur_3484 NifU family SUF system FeS assembly protein YP_002462312.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: cau:Caur_3483 SufS subfamily cysteine desulfurase YP_002462313.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: cau:Caur_3482 FeS assembly protein SufD YP_002462314.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: cau:Caur_3481 FeS assembly ATPase SufC YP_002462315.1 KEGG: cau:Caur_3480 transcriptional regulator, TrmB YP_002462316.1 KEGG: cau:Caur_3479 hypothetical protein YP_002462317.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cau:Caur_3478 ATPase YP_002462318.1 KEGG: cau:Caur_3477 TPR repeat-containing protein YP_002462319.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_3476 methyltransferase type 11 YP_002462320.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_3475 glycosyl transferase group 1 YP_002462321.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: cau:Caur_3474 YbaK/prolyl-tRNA synthetase associated region YP_002462322.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_3473 ATPase domain-containing protein YP_002462323.1 KEGG: cau:Caur_3472 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_002462324.1 KEGG: cau:Caur_3471 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase YP_002462325.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: cau:Caur_3470 carbon monoxide dehydrogenase subunit G YP_002462326.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: cau:Caur_3469 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002462327.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cau:Caur_3468 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002462328.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: cau:Caur_3467 molybdopterin dehydrogenase FAD-binding YP_002462329.1 KEGG: hau:Haur_3540 hypothetical protein YP_002462330.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: cau:Caur_3464 methionyl-tRNA synthetase YP_002462331.1 PFAM: SH3 type 3 domain protein; KEGG: cau:Caur_3070 SH3 type 3 domain-containing protein YP_002462332.1 KEGG: cau:Caur_3069 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_002462333.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: cau:Caur_3068 sigma-70 family RNA polymerase sigma factor YP_002462334.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_3036 histidine kinase YP_002462335.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cau:Caur_3037 glyoxalase/bleomycin resistance protein/dioxygenase YP_002462336.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cau:Caur_3038 hypothetical protein YP_002462337.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: cau:Caur_3039 cell shape determining protein MreB YP_002462338.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_002462339.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002462340.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_002462341.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002462342.1 PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: cau:Caur_3044 H+transporting two-sector ATPase delta (OSCP) subunit YP_002462343.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_002462344.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: cau:Caur_3046 ATP synthase F0, C subunit YP_002462345.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: cau:Caur_3047 ATP synthase F0, A subunit YP_002462346.1 PFAM: response regulator receiver; KEGG: cau:Caur_3048 response regulator receiver YP_002462347.1 KEGG: cau:Caur_3049 hypothetical protein YP_002462348.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cau:Caur_3050 ErfK/YbiS/YcfS/YnhG family protein YP_002462349.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cau:Caur_3051 NADH:flavin oxidoreductase/NADH oxidase YP_002462350.1 KEGG: cau:Caur_3052 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit YP_002462351.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cau:Caur_3053 biotin/lipoyl attachment domain-containing protein YP_002462352.1 TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; KEGG: cau:Caur_3054 sodium pump decarboxylase, gamma subunit YP_002462353.1 PFAM: carboxyl transferase; KEGG: cau:Caur_3055 carboxyl transferase YP_002462354.1 KEGG: rca:Rcas_3043 hypothetical protein YP_002462355.1 KEGG: rca:Rcas_3043 hypothetical protein YP_002462357.1 KEGG: cau:Caur_3057 PAS sensor protein YP_002462358.1 KEGG: cau:Caur_3057 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002462359.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: cau:Caur_3058 diguanylate cyclase YP_002462360.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002462361.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cau:Caur_3062 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002462362.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: cau:Caur_3063 MazG family protein YP_002462363.1 PFAM: protein of unknown function DUF951; KEGG: cau:Caur_3064 hypothetical protein YP_002462364.1 PFAM: protein of unknown function DUF107; KEGG: cau:Caur_3065 hypothetical protein YP_002462365.1 PFAM: band 7 protein; KEGG: cau:Caur_3066 band 7 protein YP_002462366.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cau:Caur_3067 hypothetical protein YP_002462367.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_002462368.1 PFAM: homoserine dehydrogenase; KEGG: cau:Caur_3338 homoserine dehydrogenase YP_002462369.1 PFAM: Aldehyde Dehydrogenase; KEGG: cau:Caur_3336 aldehyde dehydrogenase YP_002462370.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cau:Caur_3335 radical SAM domain-containing protein YP_002462371.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_3334 adenylyl cyclase class-3/4/guanylyl cyclase YP_002462372.1 KEGG: cau:Caur_3333 hypothetical protein YP_002462373.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: cau:Caur_3332 heat repeat-containing PBS lyase YP_002462374.1 Catalyzes the rate-limiting step in dNTP synthesis YP_002462375.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_3330 short-chain dehydrogenase/reductase SDR YP_002462376.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cau:Caur_3329 peptidase M20 YP_002462377.1 PFAM: putative RNA methylase; Methyltransferase type 11; KEGG: cau:Caur_3328 putative RNA methylase YP_002462378.1 KEGG: cau:Caur_3324 hypothetical protein YP_002462379.1 PFAM: protein of unknown function UPF0054; KEGG: cau:Caur_3323 hypothetical protein YP_002462380.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_3322 NUDIX hydrolase YP_002462381.1 PFAM: Inorganic pyrophosphatase; KEGG: cau:Caur_3321 inorganic diphosphatase YP_002462382.1 KEGG: cau:Caur_2913 hypothetical protein YP_002462383.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cau:Caur_2911 short-chain dehydrogenase/reductase SDR YP_002462384.1 KEGG: cau:Caur_2910 hypothetical protein YP_002462385.1 KEGG: MUC2; mucin 2, oligomeric mucus/gel-forming ; K10955 intestinal mucin-2 YP_002462386.1 KEGG: cau:Caur_2909 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002462387.1 KEGG: cau:Caur_2908 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002462388.1 KEGG: cau:Caur_2907 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) YP_002462389.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: cau:Caur_2906 NADH-ubiquinone oxidoreductase chain 4L YP_002462390.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: cau:Caur_2905 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_002462391.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cau:Caur_2904 NADH-quinone oxidoreductase, chain I YP_002462392.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: cau:Caur_2903 NADH dehydrogenase (quinone) YP_002462393.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; NADH-quinone oxidoreductase chain G; KEGG: cau:Caur_2902 NADH-quinone oxidoreductase, chain G YP_002462394.1 KEGG: cau:Caur_2901 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_002462395.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cau:Caur_2900 NADH-quinone oxidoreductase, E subunit YP_002462396.1 KEGG: cau:Caur_2899 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_002462397.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: cau:Caur_2898 NADH (or F420H2) dehydrogenase, subunit C YP_002462398.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_002462399.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: cau:Caur_2896 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_002462400.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: CBS domain containing protein; isocitrate/isopropylmalate dehydrogenase; KEGG: cau:Caur_2895 isocitrate dehydrogenase, NADP-dependent YP_002462401.1 KEGG: fjo:Fjoh_1375 hypothetical protein YP_002462402.1 PFAM: aminotransferase class I and II; KEGG: cau:Caur_2891 aminotransferase class I and II YP_002462403.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: cau:Caur_2890 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_002462404.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002462405.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: cau:Caur_2888 chaperonin GroEL YP_002462406.1 PFAM: chaperonin Cpn10; KEGG: cau:Caur_2887 chaperonin Cpn10 YP_002462407.1 PFAM: DoxX family protein; KEGG: cau:Caur_2886 DoxX family protein YP_002462409.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2943 major facilitator superfamily MFS_1 YP_002462410.1 KEGG: cau:Caur_2884 hypothetical protein YP_002462413.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002462414.1 TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein DxTHG; KEGG: rca:Rcas_3288 CRISPR-associated TM1812 family protein YP_002462415.1 KEGG: rca:Rcas_3289 hypothetical protein YP_002462418.1 KEGG: rca:Rcas_3290 hypothetical protein YP_002462419.1 KEGG: rca:Rcas_3291 hypothetical protein YP_002462420.1 PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_3292 hypothetical protein YP_002462421.1 PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_3293 hypothetical protein YP_002462422.1 KEGG: rca:Rcas_3294 hypothetical protein YP_002462423.1 KEGG: rca:Rcas_3295 hypothetical protein YP_002462424.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: cau:Caur_2270 regulatory protein LuxR YP_002462425.1 KEGG: rca:Rcas_3297 hypothetical protein YP_002462426.1 KEGG: cau:Caur_2882 alpha amylase domain-containing protein YP_002462427.1 PFAM: PfkB domain protein; KEGG: cau:Caur_2881 ribokinase-like domain-containing protein YP_002462428.1 PFAM: TM1410 hypothetical-related protein; KEGG: nmu:Nmul_A2438 hypothetical protein YP_002462429.1 KEGG: rrs:RoseRS_3815 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_002462430.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2878 ABC transporter related YP_002462431.1 PFAM: regulatory protein MarR; KEGG: cau:Caur_2877 regulatory protein MarR YP_002462432.1 KEGG: cau:Caur_2873 hypothetical protein YP_002462433.1 KEGG: cau:Caur_2872 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_002462434.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: cau:Caur_2866 regulatory protein GntR HTH YP_002462435.1 PFAM: protein of unknown function DUF81; KEGG: cau:Caur_2865 hypothetical protein YP_002462436.1 KEGG: dth:DICTH_1703 HflC protein YP_002462438.1 KEGG: bcz:BCZK0817 ATPase YP_002462440.1 KEGG: scl:sce7311 hypothetical protein YP_002462442.1 KEGG: rca:Rcas_3686 prevent-host-death family protein YP_002462443.1 KEGG: rca:Rcas_3706 hypothetical protein YP_002462444.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cau:Caur_2526 D12 class N6 adenine-specific DNA methyltransferase YP_002462445.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: cau:Caur_2864 histidine kinase YP_002462446.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_2863 response regulator receiver YP_002462447.1 KEGG: cau:Caur_2862 hypothetical protein YP_002462448.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_2861 major facilitator transporter YP_002462449.1 PFAM: protein of unknown function DUF1396; KEGG: cau:Caur_2860 hypothetical protein YP_002462450.1 KEGG: cau:Caur_2859 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_002462451.1 KEGG: cau:Caur_2857 hypothetical protein YP_002462452.1 PFAM: metallophosphoesterase; KEGG: cau:Caur_2856 metallophosphoesterase YP_002462453.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_2853 methyltransferase type 11 YP_002462454.1 KEGG: cau:Caur_2852 hypothetical protein YP_002462455.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002462456.1 KEGG: cau:Caur_2850 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002462457.1 PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: cau:Caur_2849 ornithine cyclodeaminase YP_002462458.1 PFAM: RNA binding S1 domain protein; KEGG: cau:Caur_2848 RNA-binding S1 domain-containing protein YP_002462459.1 PFAM: metalloenzyme domain protein; KEGG: cau:Caur_2847 metalloenzyme domain-containing protein YP_002462460.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: cau:Caur_2846 acid phosphatase YP_002462461.1 PFAM: ribosomal RNA methyltransferase; KEGG: cau:Caur_2845 ribosomal RNA methyltransferase YP_002462462.1 KEGG: cau:Caur_2844 tRNA-guanine transglycosylase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase YP_002462463.1 TIGRFAM: prevent-host-death family protein; KEGG: cau:Caur_2843 prevent-host-death family protein YP_002462464.1 KEGG: ace:Acel_0811 hypothetical protein YP_002462465.1 KEGG: ace:Acel_0814 hypothetical protein YP_002462466.1 KEGG: ace:Acel_0812 hypothetical protein YP_002462467.1 KEGG: rca:Rcas_0957 hypothetical protein YP_002462468.1 KEGG: lxx:Lxx02510 DNA methyltransferase YP_002462469.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: ace:Acel_0816 helicase domain protein YP_002462470.1 PFAM: PglZ domain protein; KEGG: min:Minf_0322 PglZ domain containing protein, alkaline phosphatase family YP_002462471.1 KEGG: min:Minf_0321 conserved protein, VrlQ family YP_002462472.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: cau:Caur_2842 aromatic-L-amino-acid decarboxylase YP_002462473.1 KEGG: cau:Caur_2841 hypothetical protein YP_002462474.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cau:Caur_2840 dihydrolipoamide dehydrogenase YP_002462475.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002462476.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: cau:Caur_2835 lipoate-protein ligase B YP_002462477.1 PFAM: peptidase C60 sortase A and B; KEGG: cau:Caur_2834 peptidase C60 sortase A and B YP_002462478.1 PFAM: Luciferase-like monooxygenase; KEGG: cau:Caur_2833 luciferase family protein YP_002462479.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: cau:Caur_2832 carbamoyl-phosphate synthase L chain ATP-binding YP_002462480.1 KEGG: cau:Caur_2831 hypothetical protein YP_002462481.1 PFAM: von Willebrand factor type A; KEGG: cau:Caur_2830 von Willebrand factor type A YP_002462482.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cau:Caur_2829 peptidylprolyl isomerase YP_002462483.1 PFAM: creatinase; peptidase M24; KEGG: cau:Caur_0240 peptidase M24 YP_002462484.1 PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase; KEGG: cau:Caur_0239 non-specific serine/threonine protein kinase YP_002462485.1 KEGG: cau:Caur_0238 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002462486.1 KEGG: cau:Caur_0237 hypothetical protein YP_002462487.1 TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: cau:Caur_0236 hydroxymethylglutaryl-CoA reductase, degradative YP_002462488.1 TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: cau:Caur_0235 hypothetical protein YP_002462489.1 KEGG: cau:Caur_0234 acetyl-CoA acetyltransferase-like protein YP_002462490.1 KEGG: cau:Caur_0233 hypothetical protein YP_002462491.1 PFAM: protein of unknown function DUF35; KEGG: cau:Caur_0232 hypothetical protein YP_002462492.1 PFAM: Rhodanese domain protein; KEGG: cau:Caur_0231 rhodanese domain-containing protein YP_002462493.1 TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: cau:Caur_0230 sulfate transporter YP_002462494.1 PFAM: protein of unknown function DUF442; KEGG: cau:Caur_0229 hypothetical protein YP_002462495.1 PFAM: Rhodanese domain protein; KEGG: cau:Caur_0228 rhodanese domain-containing protein YP_002462496.1 KEGG: cau:Caur_0227 hypothetical protein YP_002462497.1 PFAM: SirA family protein; KEGG: cau:Caur_0226 SirA family protein YP_002462498.1 PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: cau:Caur_0225 beta-lactamase domain-containing protein YP_002462499.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cau:Caur_0065 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002462500.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: sfu:Sfum_0640 Mn2+/Fe2+ transporter, NRAMP family YP_002462501.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: cau:Caur_0082 citrate transporter YP_002462502.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: cau:Caur_0099 transcriptional regulator IclR YP_002462503.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cau:Caur_0098 hexapaptide repeat-containing transferase YP_002462504.1 PFAM: protein of unknown function DUF1405; KEGG: cau:Caur_0097 hypothetical protein YP_002462505.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_0096 O-succinylbenzoate-CoA ligase YP_002462506.1 KEGG: ENSAPMG00000003212. YP_002462507.1 TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: cau:Caur_0095 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_002462508.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cau:Caur_0094 naphthoate synthase YP_002462509.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: rca:Rcas_1860 molybdenum cofactor synthesis domain-containing protein YP_002462510.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: rca:Rcas_1861 molybdenum cofactor synthesis domain-containing protein YP_002462511.1 TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: rca:Rcas_1862 MoaD family protein YP_002462512.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: rca:Rcas_1863 aldehyde ferredoxin oxidoreductase YP_002462513.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_0087 alpha/beta hydrolase fold-containing protein YP_002462514.1 KEGG: cau:Caur_0086 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_002462515.1 PFAM: protein of unknown function DUF309; KEGG: cau:Caur_0085 hypothetical protein YP_002462516.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0084 glycosyl transferase group 1 YP_002462517.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cau:Caur_0083 phosphotransferase domain-containing protein YP_002462518.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: cau:Caur_0100 FeoA family protein YP_002462519.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cau:Caur_0101 enoyl-CoA hydratase/isomerase YP_002462520.1 KEGG: cau:Caur_0102 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002462521.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_0104 major facilitator transporter YP_002462522.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0105 glycosyl transferase group 1 YP_002462523.1 KEGG: cau:Caur_0106 lipopolysaccharide biosynthesis protein YP_002462524.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: cau:Caur_0107 lipopolysaccharide biosynthesis protein YP_002462525.1 TIGRFAM: capsular exopolysaccharide family; KEGG: cau:Caur_0108 exopolysaccharide tyrosine-protein kinase YP_002462526.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_0109 response regulator receiver YP_002462527.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_0110 histidine kinase YP_002462528.1 KEGG: cau:Caur_0066 hypothetical protein YP_002462529.1 TIGRFAM: CRISPR-associated autoregulator DevR family; PFAM: CRISPR-associated regulatory Csa2 family protein; KEGG: cau:Caur_0067 CRISPR-associated autoregulator DevR family protein YP_002462530.1 KEGG: cau:Caur_0068 hypothetical protein YP_002462531.1 KEGG: cau:Caur_0070 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_002462532.1 KEGG: cau:Caur_0071 regulatory protein, DeoR YP_002462533.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: cau:Caur_0113 peptidoglycan glycosyltransferase YP_002462534.1 TIGRFAM: rod shape-determining protein MreD; KEGG: cau:Caur_0114 hypothetical protein YP_002462535.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_002462536.1 functions in MreBCD complex in some organisms YP_002462537.1 KEGG: cau:Caur_0117 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor type A; SMART: AAA ATPase YP_002462538.1 PFAM: RNA binding S1 domain protein; KEGG: cau:Caur_0118 RNA-binding S1 domain-containing protein YP_002462539.1 PFAM: ribosomal protein L34; KEGG: cau:Caur_0119 ribosomal protein L34 YP_002462540.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: cau:Caur_0120 ribonuclease P protein component YP_002462541.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: cau:Caur_0121 60 kDa inner membrane insertion protein YP_002462542.1 PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cau:Caur_0122 single-stranded nucleic acid binding R3H domain-containing protein YP_002462543.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002462544.1 KEGG: rca:Rcas_2076 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002462545.1 PFAM: PfkB domain protein; KEGG: cau:Caur_0150 ribokinase-like domain-containing protein YP_002462546.1 KEGG: cau:Caur_0149 amino acid permease-associated region YP_002462547.1 KEGG: cau:Caur_0146 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_002462548.1 PFAM: ABC-2 type transporter; KEGG: cau:Caur_0145 ABC-2 type transporter YP_002462549.1 PFAM: Peptidase M23; SMART: helix-turn-helix domain protein; KEGG: cau:Caur_0144 peptidase M23B YP_002462550.1 KEGG: cau:Caur_0143 hypothetical protein YP_002462551.1 KEGG: cau:Caur_0142 hypothetical protein YP_002462552.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cau:Caur_0141 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002462553.1 KEGG: cau:Caur_0140 hypothetical protein YP_002462554.1 KEGG: cau:Caur_0139 hypothetical protein YP_002462555.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cau:Caur_0138 bacteriochlorophyll/chlorophyll synthetase YP_002462556.1 TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cau:Caur_0137 C-20 methyltransferase BchU YP_002462557.1 KEGG: cau:Caur_0136 hypothetical protein YP_002462558.1 KEGG: cau:Caur_0135 putative lipase YP_002462559.1 KEGG: cau:Caur_0134 putative lipase YP_002462560.1 KEGG: cau:Caur_0133 hypothetical protein YP_002462561.1 KEGG: cau:Caur_0132 hypothetical protein YP_002462562.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_0131 alpha/beta hydrolase fold-containing protein YP_002462563.1 PFAM: Anion-transporting ATPase; KEGG: cau:Caur_0130 anion-transporting ATPase YP_002462564.1 PFAM: Anion-transporting ATPase; KEGG: cau:Caur_0129 arsenite-transporting ATPase YP_002462565.1 KEGG: cau:Caur_0128 hypothetical protein YP_002462566.1 KEGG: cau:Caur_0127 hypothetical protein YP_002462567.1 PFAM: bacteriochlorophyll C binding protein; KEGG: cau:Caur_0126 bacteriochlorophyll C binding protein YP_002462568.1 KEGG: cau:Caur_0125 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase YP_002462569.1 KEGG: cau:Caur_0124 hypothetical protein YP_002462570.1 PFAM: globin; KEGG: cau:Caur_0123 globin YP_002462571.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_0151 alpha/beta hydrolase fold-containing protein YP_002462572.1 KEGG: cau:Caur_0152 hypothetical protein YP_002462573.1 PFAM: protein of unknown function DUF901; KEGG: cau:Caur_0154 hypothetical protein YP_002462574.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_0155 methyltransferase type 12 YP_002462575.1 TIGRFAM: dihydroneopterin aldolase; KEGG: cau:Caur_0156 dihydroneopterin aldolase YP_002462576.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: cau:Caur_0157 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_002462577.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: cau:Caur_0158 alcohol dehydrogenase YP_002462578.1 KEGG: cau:Caur_0159 putative 6-pyruvoyl tetrahydropterin synthase YP_002462579.1 KEGG: rrs:RoseRS_2913 hypothetical protein YP_002462580.1 KEGG: LOC100134375; similar to predicted protein YP_002462581.1 KEGG: cau:Caur_0159 putative 6-pyruvoyl tetrahydropterin synthase YP_002462582.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0160 glycosyl transferase group 1 YP_002462583.1 KEGG: cau:Caur_0161 hypothetical protein YP_002462584.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cau:Caur_0163 acetolactate synthase, large subunit, biosynthetic type YP_002462585.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit; KEGG: cau:Caur_0164 acetolactate synthase, small subunit YP_002462586.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002462587.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cau:Caur_0166 2-isopropylmalate synthase YP_002462588.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: cau:Caur_0167 prephenate dehydratase YP_002462589.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_002462590.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_002462591.1 PFAM: Peptidase M23; KEGG: cau:Caur_2604 peptidase M23B YP_002462592.1 KEGG: cau:Caur_2606 hypothetical protein YP_002462593.1 KEGG: cau:Caur_2607 hypothetical protein YP_002462594.1 KEGG: cau:Caur_2608 hypothetical protein YP_002462595.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: cau:Caur_2609 ATP-dependent Clp protease adaptor protein ClpS YP_002462596.1 PFAM: von Willebrand factor type A; protein of unknown function DUF1355; KEGG: cau:Caur_2610 von Willebrand factor type A YP_002462597.1 PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_2611 stage II sporulation E family protein YP_002462598.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: cau:Caur_2612 folate-binding protein YgfZ YP_002462599.1 PFAM: cytochrome P450; KEGG: cau:Caur_2613 cytochrome P450 YP_002462600.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: cau:Caur_2614 short-chain dehydrogenase/reductase SDR YP_002462601.1 KEGG: cau:Caur_2558 TPR repeat-containing protein YP_002462602.1 KEGG: cau:Caur_2559 hypothetical protein YP_002462603.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_002462604.1 PFAM: aminotransferase class I and II; KEGG: cau:Caur_2561 aminotransferase class I and II YP_002462605.1 PFAM: cobalbumin biosynthesis protein; KEGG: cau:Caur_2562 adenosylcobinamide-phosphate guanylyltransferase YP_002462606.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: cau:Caur_2563 cobyrinic acid a,c-diamide synthase YP_002462607.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cau:Caur_2564 uroporphyrin-III C-methyltransferase YP_002462608.1 TIGRFAM: precorrin-3B C17-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: cau:Caur_2565 precorrin-3B C17-methyltransferase YP_002462609.1 KEGG: cau:Caur_2566 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_002462610.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cau:Caur_2567 precorrin-2 C20-methyltransferase YP_002462611.1 KEGG: cau:Caur_2568 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Methyltransferase type 12 YP_002462612.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A YP_002462613.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: cau:Caur_2570 precorrin-8X methylmutase CbiC/CobH YP_002462614.1 KEGG: cau:Caur_2571 multimeric flavodoxin WrbA-like protein YP_002462615.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: cau:Caur_2572 cobalamin (vitamin B12) biosynthesis CbiX protein YP_002462616.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: cau:Caur_2573 cobalamin biosynthesis protein CobD YP_002462617.1 KEGG: cau:Caur_2574 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_002462618.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cau:Caur_2575 cobalt ABC transporter, inner membrane subunit CbiQ YP_002462619.1 PFAM: Cobalt transport protein CbiN; KEGG: cau:Caur_2576 cobalt transport protein CbiN YP_002462620.1 TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cau:Caur_2577 cobalamin biosynthesis protein CbiM YP_002462621.1 KEGG: cau:Caur_2578 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_002462622.1 KEGG: cau:Caur_2579 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase YP_002462623.1 KEGG: cau:Caur_2580 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_002462624.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway YP_002462625.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: cau:Caur_2586 diguanylate cyclase YP_002462626.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: cau:Caur_2587 threonine aldolase YP_002462627.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine YP_002462628.1 KEGG: cau:Caur_2589 hypothetical protein YP_002462629.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis YP_002462630.1 catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis YP_002462631.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: cau:Caur_2592 PucC protein YP_002462632.1 KEGG: cau:Caur_2593 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_002462633.1 KEGG: cau:Caur_2594 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_002462634.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: cau:Caur_2595 uroporphyrinogen III synthase HEM4 YP_002462635.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002462636.1 KEGG: cau:Caur_2597 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_002462637.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_002462638.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_002462639.1 PFAM: LmbE family protein; KEGG: cau:Caur_0355 LmbE family protein YP_002462640.1 PFAM: ferredoxin; KEGG: cau:Caur_0356 ferredoxin YP_002462641.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: cau:Caur_0357 phospholipid/glycerol acyltransferase YP_002462642.1 PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_4096 major facilitator transporter YP_002462643.1 PFAM: GTP cyclohydrolase II; KEGG: cau:Caur_0359 GTP cyclohydrolase II YP_002462644.1 PFAM: protein of unknown function DUF88; KEGG: cau:Caur_0367 hypothetical protein YP_002462645.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cau:Caur_0368 xylose isomerase domain-containing protein YP_002462646.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_0370 short-chain dehydrogenase/reductase SDR YP_002462647.1 PFAM: pyruvate carboxyltransferase; KEGG: cau:Caur_0371 pyruvate carboxyltransferase YP_002462648.1 KEGG: cau:Caur_0372 hypothetical protein YP_002462649.1 KEGG: LOC100015323; similar to predicted protein YP_002462650.1 PFAM: protein of unknown function UPF0027; KEGG: cau:Caur_0538 hypothetical protein YP_002462651.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_2539 alpha amylase catalytic region YP_002462652.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_2538 binding-protein-dependent transport systems inner membrane component YP_002462653.1 PFAM: NMT1/THI5 like domain protein; KEGG: cau:Caur_2537 NMT1/THI5-like domain-containing protein YP_002462654.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: cau:Caur_2600 oligoendopeptidase F YP_002462655.1 KEGG: hypothetical protein YP_002462656.1 PFAM: protein of unknown function DUF87; KEGG: bca:BCE_1138 hypothetical protein YP_002462657.1 KEGG: syn:sll1021 hypothetical protein YP_002462660.1 KEGG: ava:Ava_4732 hypothetical protein YP_002462661.1 PFAM: von Willebrand factor type A; KEGG: rca:Rcas_1710 von Willebrand factor type A YP_002462663.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_2601 major facilitator transporter YP_002462664.1 PFAM: Amidohydrolase 3; KEGG: cau:Caur_2602 amidohydrolase 3 YP_002462665.1 KEGG: cau:Caur_2603 hypothetical protein YP_002462666.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: cau:Caur_0170 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002462667.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: cau:Caur_0171 glycosyl transferase family protein YP_002462668.1 KEGG: cau:Caur_0172 hypothetical protein YP_002462669.1 PFAM: MaoC domain protein dehydratase; KEGG: rca:Rcas_0913 dehydratase YP_002462670.1 KEGG: LOC100133104; hypothetical protein LOC100133104 YP_002462671.1 PFAM: HpcH/HpaI aldolase; KEGG: cau:Caur_0174 HpcH/HpaI aldolase YP_002462672.1 KEGG: cau:Caur_0175 L-carnitine dehydratase/bile acid-inducible protein F YP_002462673.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cau:Caur_0178 L-carnitine dehydratase/bile acid-inducible protein F YP_002462674.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cau:Caur_0179 L-carnitine dehydratase/bile acid-inducible protein F YP_002462675.1 KEGG: cau:Caur_0180 hypothetical protein YP_002462676.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cau:Caur_0181 hypothetical protein YP_002462677.1 KEGG: cau:Caur_0182 hypothetical protein YP_002462678.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: cau:Caur_0183 formate dehydrogenase family accessory protein FdhD YP_002462679.1 KEGG: cau:Caur_0184 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_002462680.1 PFAM: LmbE family protein; KEGG: cau:Caur_2615 LmbE family protein YP_002462681.1 PFAM: aminotransferase class-III; KEGG: cau:Caur_2616 aminotransferase class-III YP_002462683.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_2619 GCN5-related N-acetyltransferase YP_002462684.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge YP_002462685.1 PFAM: regulatory protein MarR; KEGG: cau:Caur_2621 regulatory protein MarR YP_002462686.1 PFAM: ComEC/Rec2-related protein; KEGG: cau:Caur_2622 ComEC/Rec2-related protein YP_002462687.1 PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: cau:Caur_2624 peptidase S9 prolyl oligopeptidase YP_002462688.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_2625 ATPase domain-containing protein YP_002462689.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: cau:Caur_2626 response regulator receiver YP_002462690.1 KEGG: cau:Caur_3917 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein YP_002462691.1 KEGG: cau:Caur_2509 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase YP_002462692.1 MDM; functions in conversion of succinate to propionate YP_002462693.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_002462694.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_2506 response regulator receiver YP_002462695.1 PFAM: thioesterase superfamily protein; KEGG: cau:Caur_2505 thioesterase superfamily protein YP_002462696.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_2504 methyltransferase type 11 YP_002462697.1 PFAM: WD-40 repeat protein; KEGG: cau:Caur_2503 WD-40 repeat-containing protein YP_002462698.1 KEGG: cau:Caur_2502 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein YP_002462699.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_002462700.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002462701.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: cau:Caur_2499 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002462702.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: cau:Caur_2498 prolipoprotein diacylglyceryl transferase YP_002462703.1 KEGG: cau:Caur_2497 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002462704.1 acts as a promotor non-specific transcription repressor YP_002462705.1 PFAM: KaiB domain protein; KEGG: mma:MM_1091 thiol-disulfide isomerase YP_002462706.1 PFAM: KaiB domain protein; KEGG: cau:Caur_2496 KaiB domain-containing protein YP_002462707.1 KEGG: cau:Caur_2495 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002462708.1 PFAM: Translin; KEGG: cau:Caur_2494 translin family protein YP_002462709.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rrs:RoseRS_2508 diguanylate cyclase YP_002462710.1 PFAM: cyclase family protein; KEGG: cau:Caur_2493 cyclase family protein YP_002462711.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_2176 ABC transporter related YP_002462712.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_2491 molybdate ABC transporter, inner membrane subunit YP_002462713.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_2490 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_002462714.1 PFAM: transcriptional regulator PadR family protein; KEGG: cau:Caur_2489 transcriptional regulator PadR family protein YP_002462715.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: cau:Caur_1068 peptidase S9 prolyl oligopeptidase YP_002462716.1 SMART: helix-turn-helix domain protein; KEGG: cau:Caur_1069 helix-turn-helix domain-containing protein YP_002462717.1 PFAM: protein of unknown function DUF87; SMART: AAA ATPase; KEGG: mka:MK0692 P-loop ATPase YP_002462719.1 PFAM: helix-hairpin-helix motif; HhH-GPD family protein; Endonuclease III FCL domain protein; SMART: iron-sulfur cluster loop; KEGG: tpe:Tpen_1001 HhH-GPD family protein YP_002462720.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: ecp:ECP_4572 modification methylase YP_002462721.1 KEGG: cyt:cce_2281 putative type II restriction enzyme NspV YP_002462722.1 KEGG: rca:Rcas_1074 modification methylase NspV YP_002462723.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1707 glycosyl transferase group 1 YP_002462724.1 KEGG: cau:Caur_1706 hypothetical protein YP_002462725.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_1705 GCN5-related N-acetyltransferase YP_002462726.1 PFAM: Dual specificity protein phosphatase; KEGG: cau:Caur_1704 dual specificity protein phosphatase YP_002462727.1 PFAM: protein of unknown function DUF472; KEGG: cau:Caur_1703 hypothetical protein YP_002462728.1 TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: cau:Caur_1702 uridine kinase YP_002462729.1 KEGG: cau:Caur_1701 hypothetical protein YP_002462730.1 PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: cau:Caur_1700 peptidase membrane zinc metallopeptidase putative YP_002462731.1 KEGG: cau:Caur_1699 hypothetical protein YP_002462732.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: cau:Caur_1698 Glu/Leu/Phe/Val dehydrogenase YP_002462733.1 PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: cau:Caur_1697 peptidase M42 family protein YP_002462734.1 PFAM: protein of unknown function DUF1025; KEGG: cau:Caur_1696 hypothetical protein YP_002462735.1 PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: cau:Caur_1695 glycoside hydrolase family protein YP_002462736.1 KEGG: cau:Caur_1694 TPR repeat-containing protein YP_002462737.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: cau:Caur_1894 carboxypeptidase Taq YP_002462738.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: cau:Caur_1895 aminotransferase class I and II YP_002462739.1 KEGG: cau:Caur_1896 hypothetical protein YP_002462740.1 KEGG: cau:Caur_1791 hypothetical protein YP_002462741.1 PFAM: molybdopterin binding domain; KEGG: cau:Caur_1790 molybdopterin binding domain-containing protein YP_002462742.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_1789 TPR repeat-containing protein YP_002462744.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1788 glycosyl transferase group 1 YP_002462745.1 KEGG: cau:Caur_1787 hypothetical protein YP_002462746.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: cau:Caur_1786 protein of unknown function UPF0052 and CofD YP_002462747.1 KEGG: cau:Caur_1785 nitrogen regulatory protein P-II YP_002462748.1 PFAM: protein of unknown function DUF897; KEGG: cau:Caur_1784 hypothetical protein YP_002462749.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1783 sugar (glycoside-pentoside-hexuronide) transporter YP_002462750.1 KEGG: cau:Caur_0780 DNA-(apurinic or apyrimidinic site) lyase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; Endonuclease III HhH domain protein; SMART: iron-sulfur cluster loop YP_002462751.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cau:Caur_0781 peptidoglycan binding domain-containing protein YP_002462752.1 KEGG: cau:Caur_0782 hypothetical protein YP_002462753.1 PFAM: extracellular solute-binding protein family 5; KEGG: cau:Caur_0786 extracellular solute-binding protein YP_002462754.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0787 binding-protein-dependent transport systems inner membrane component YP_002462755.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0788 binding-protein-dependent transport systems inner membrane component YP_002462756.1 KEGG: cau:Caur_0789 hypothetical protein YP_002462757.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: cau:Caur_0790 phospholipase D/transphosphatidylase YP_002462758.1 PFAM: NERD domain protein; KEGG: cau:Caur_1065 NERD domain-containing protein YP_002462759.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_002462760.1 PFAM: protein of unknown function DUF541; KEGG: cau:Caur_1063 hypothetical protein YP_002462761.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cau:Caur_1904 MATE efflux family protein YP_002462762.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cau:Caur_1903 amidohydrolase YP_002462763.1 KEGG: cau:Caur_1902 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_002462764.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: cau:Caur_1901 1A family penicillin-binding protein YP_002462765.1 KEGG: NEMVEDRAFT_v1g197208; predicted protein YP_002462766.1 KEGG: mca:MCA0837 hypothetical protein YP_002462767.1 KEGG: cau:Caur_0442 hypothetical protein YP_002462768.1 KEGG: cau:Caur_0443 hypothetical protein YP_002462769.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002462770.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_0445 NUDIX hydrolase YP_002462771.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_0446 NUDIX hydrolase YP_002462773.1 KEGG: cau:Caur_2468 hypothetical protein YP_002462774.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2469 ABC transporter related YP_002462775.1 KEGG: cau:Caur_2470 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein YP_002462776.1 KEGG: GL14840 gene product from transcript GL14840-RA YP_002462777.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_002462778.1 PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: cau:Caur_2472 CBS domain-containing protein YP_002462779.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cau:Caur_2473 ATPase YP_002462780.1 PFAM: RNA binding S1 domain protein; KEGG: cau:Caur_2474 RNA-binding S1 domain-containing protein YP_002462781.1 KEGG: cau:Caur_2475 hypothetical protein YP_002462782.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_2476 beta-lactamase domain-containing protein YP_002462783.1 PFAM: Rhodanese domain protein; KEGG: cau:Caur_2477 rhodanese domain-containing protein YP_002462784.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cau:Caur_2478 phosphotransferase domain-containing protein YP_002462785.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_2479 NUDIX hydrolase YP_002462786.1 KEGG: cau:Caur_2480 hypothetical protein YP_002462787.1 KEGG: cau:Caur_2481 hypothetical protein YP_002462788.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: cau:Caur_2482 5-formyltetrahydrofolate cyclo-ligase YP_002462789.1 KEGG: cau:Caur_2483 putative 2-nitropropane dioxygenase YP_002462790.1 PFAM: WD40 domain protein beta Propeller; KEGG: cau:Caur_2484 WD40 domain-containing protein YP_002462791.1 PFAM: diacylglycerol kinase catalytic region; KEGG: cau:Caur_2485 diacylglycerol kinase catalytic region YP_002462793.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cau:Caur_2486 integrase family protein YP_002462794.1 TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: cau:Caur_2487 glycyl-tRNA synthetase YP_002462795.1 PFAM: oxidoreductase molybdopterin binding; KEGG: cau:Caur_2488 oxidoreductase molybdopterin binding YP_002462796.1 PFAM: regulatory protein MarR; KEGG: cau:Caur_1708 regulatory protein MarR YP_002462797.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1709 ABC transporter related YP_002462798.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1710 ABC transporter related YP_002462799.1 KEGG: cau:Caur_1711 hypothetical protein YP_002462800.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002462801.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002462802.1 PFAM: ferric-uptake regulator; KEGG: cau:Caur_1714 ferric-uptake regulator YP_002462803.1 KEGG: cau:Caur_1715 hypothetical protein YP_002462804.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_1716 GCN5-related N-acetyltransferase YP_002462805.1 PFAM: tyrosine protein kinase; SH3 type 3 domain protein; SMART: serine/threonine protein kinase; KEGG: cau:Caur_1717 SH3 type 3 domain-containing protein YP_002462806.1 PFAM: aminotransferase class-III; KEGG: cau:Caur_1718 aminotransferase class-III YP_002462807.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_002462808.1 KEGG: cau:Caur_2197 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_002462809.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cau:Caur_2196 CBS domain-containing protein YP_002462810.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cau:Caur_2195 cytidine deaminase YP_002462811.1 PFAM: transposase IS4 family protein; KEGG: gvi:glr0155 putative transposase YP_002462812.1 KEGG: cau:Caur_2194 hypothetical protein YP_002462813.1 KEGG: cau:Caur_2193 hypothetical protein YP_002462814.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002462815.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_002462816.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002462817.1 binds directly to 23S ribosomal RNA YP_002462818.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: cau:Caur_2184 transcription termination/antitermination factor NusG YP_002462819.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: cau:Caur_2183 preprotein translocase, SecE subunit YP_002462820.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002462821.1 KEGG: cau:Caur_2181 hypothetical protein YP_002462822.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gka:GK1026 3-oxoacyl-(acyl carrier protein) reductase YP_002462823.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cau:Caur_2180 cupin 2 domain-containing protein YP_002462824.1 PFAM: phosphoglucose isomerase (PGI); KEGG: cau:Caur_2179 glucose-6-phosphate isomerase YP_002462825.1 KEGG: cau:Caur_2178 hypothetical protein YP_002462826.1 TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: cau:Caur_2177 cytidyltransferase-like protein YP_002462827.1 KEGG: cau:Caur_2174 hypothetical protein YP_002462828.1 KEGG: cau:Caur_2173 hypothetical protein YP_002462829.1 KEGG: cau:Caur_2172 hypothetical protein YP_002462830.1 KEGG: cau:Caur_2171 hypothetical protein YP_002462831.1 PFAM: GPW/gp25 family protein; KEGG: cau:Caur_2170 gpW/GP25 family protein YP_002462832.1 KEGG: cau:Caur_2169 hypothetical protein YP_002462833.1 KEGG: cau:Caur_2168 hypothetical protein YP_002462834.1 KEGG: cau:Caur_2167 hypothetical protein YP_002462835.1 KEGG: cau:Caur_2166 hypothetical protein YP_002462836.1 KEGG: cau:Caur_2165 putative signal peptide YP_002462837.1 KEGG: cau:Caur_2164 hypothetical protein YP_002462838.1 KEGG: cau:Caur_2163 hypothetical protein YP_002462839.1 KEGG: cau:Caur_2162 hypothetical protein YP_002462840.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cau:Caur_2161 ATPase central domain-containing protein YP_002462841.1 KEGG: cau:Caur_2160 hypothetical protein YP_002462842.1 KEGG: cau:Caur_2159 hypothetical protein YP_002462843.1 KEGG: cau:Caur_2158 hypothetical protein YP_002462844.1 TIGRFAM: conserved hypothetical protein; KEGG: cau:Caur_2157 phage tail protein YP_002462845.1 PFAM: tail sheath protein; KEGG: cau:Caur_2156 tail sheath protein YP_002462846.1 PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: cau:Caur_2154 pathogenesis-related transcriptional factor and ERF protein YP_002462847.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: cau:Caur_2153 cupin 2 domain-containing protein YP_002462848.1 KEGG: cau:Caur_2152 hypothetical protein YP_002462849.1 KEGG: cau:Caur_2151 hypothetical protein YP_002462850.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: cau:Caur_2150 phosphodiesterase YP_002462851.1 KEGG: cau:Caur_2149 protein tyrosine phosphatase YP_002462852.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: cau:Caur_2148 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_002462853.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_2147 GCN5-related N-acetyltransferase YP_002462854.1 KEGG: Tnxb; tenascin XB ; K06252 tenascin YP_002462855.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_2146 GCN5-related N-acetyltransferase YP_002462856.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cau:Caur_2145 HAD family hydrolase YP_002462857.1 KEGG: rca:Rcas_3651 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002462858.1 TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: cau:Caur_2144 caa(3)-type oxidase, subunit IV YP_002462859.1 PFAM: cytochrome c oxidase subunit III; KEGG: cau:Caur_2143 cytochrome c oxidase subunit III YP_002462860.1 KEGG: cau:Caur_2142 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_002462861.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: cau:Caur_2141 cytochrome c oxidase, subunit II YP_002462862.1 KEGG: cau:Caur_2140 electron transport protein SCO1/SenC YP_002462863.1 KEGG: cau:Caur_2139 hypothetical protein YP_002462864.1 KEGG: cau:Caur_2138 hypothetical protein YP_002462865.1 KEGG: cau:Caur_2137 hypothetical protein YP_002462866.1 KEGG: cau:Caur_2136 Fe-S-cluster-containing hydrogenase components 1-like protein YP_002462867.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cau:Caur_2135 hypothetical protein YP_002462868.1 PFAM: FAD linked oxidase domain protein; KEGG: cau:Caur_2134 D-lactate dehydrogenase (cytochrome) YP_002462869.1 PFAM: FAD linked oxidase domain protein; KEGG: cau:Caur_2133 FAD linked oxidase domain-containing protein YP_002462870.1 PFAM: FAD linked oxidase domain protein; KEGG: cau:Caur_2132 D-lactate dehydrogenase (cytochrome) YP_002462871.1 PFAM: Methyltransferase type 12; Ribosomal small subunit Rsm22; KEGG: cau:Caur_2131 ribosomal small subunit Rsm22 YP_002462872.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_2129 glycosyl transferase group 1 YP_002462873.1 KEGG: cau:Caur_2128 CapK protein, putative YP_002462874.1 PFAM: YdjC family protein; KEGG: cau:Caur_2127 YdjC family protein YP_002462875.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_2126 glycosyl transferase group 1 YP_002462876.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_2125 glycosyl transferase family protein YP_002462877.1 KEGG: cau:Caur_2124 hypothetical protein YP_002462878.1 KEGG: cau:Caur_2123 hypothetical protein YP_002462879.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_2122 glycosyl transferase family protein YP_002462880.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: cau:Caur_2121 NAD-dependent epimerase/dehydratase YP_002462881.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_2120 NAD-dependent epimerase/dehydratase YP_002462882.1 PFAM: secretion protein HlyD family protein; KEGG: cau:Caur_2119 secretion protein HlyD family protein YP_002462883.1 KEGG: cau:Caur_2118 exopolysaccharide tyrosine-protein kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_002462884.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_2117 glycosyl transferase group 1 YP_002462885.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_2116 glycosyl transferase family protein YP_002462886.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cau:Caur_2115 hexapaptide repeat-containing transferase YP_002462887.1 PFAM: sulfotransferase; KEGG: cau:Caur_2114 sulfotransferase YP_002462888.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis YP_002462889.1 PFAM: polysaccharide deacetylase; KEGG: cau:Caur_2112 polysaccharide deacetylase YP_002462890.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_2111 glycosyl transferase family protein YP_002462891.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: cau:Caur_2110 nucleotide sugar dehydrogenase YP_002462892.1 KEGG: cau:Caur_2109 glucose/sorbosone dehydrogenase-like protein YP_002462893.1 KEGG: cau:Caur_2109 glucose/sorbosone dehydrogenase-like protein YP_002462894.1 PFAM: VanZ family protein; KEGG: cau:Caur_2108 VanZ family protein YP_002462895.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2107 ABC transporter related YP_002462896.1 PFAM: ABC-2 type transporter; KEGG: cau:Caur_2106 ABC-2 type transporter YP_002462897.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cau:Caur_2105 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_002462898.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: cau:Caur_2104 molybdenum cofactor synthesis domain-containing protein YP_002462900.1 PFAM: 3-dehydroquinate synthase; KEGG: cau:Caur_2103 3-dehydroquinate synthase YP_002462901.1 PFAM: Lycopene beta and epsilon cyclase; KEGG: cau:Caur_1819 lycopene beta and epsilon cyclase YP_002462902.1 PFAM: OsmC family protein; KEGG: cau:Caur_1820 OsmC family protein YP_002462903.1 PFAM: YceI family protein; KEGG: cau:Caur_1821 YceI family protein YP_002462904.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: cau:Caur_1822 glutaredoxin-like protein YP_002462905.1 KEGG: cau:Caur_0657 hypothetical protein YP_002462906.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_0656 histidine kinase dimerisation and phosphoacceptor region YP_002462907.1 PFAM: putative esterase; KEGG: cau:Caur_0655 putative esterase YP_002462908.1 activates fatty acids by binding to coenzyme A YP_002462909.1 KEGG: cau:Caur_1887 TPR repeat-containing protein YP_002462910.1 PFAM: Peptidase M23; KEGG: cau:Caur_1886 peptidase M23B YP_002462911.1 KEGG: cau:Caur_1885 hypothetical protein YP_002462912.1 KEGG: cau:Caur_1884 hypothetical protein YP_002462913.1 SMART: AAA ATPase; KEGG: cau:Caur_1883 AAA ATPase YP_002462914.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: cau:Caur_1882 succinate dehydrogenase/fumarate reductase cytochrome b subunit YP_002462915.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002462916.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cau:Caur_1880 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_002462917.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1878 glycosyl transferase group 1 YP_002462919.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cau:Caur_1877 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_002462920.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cau:Caur_1876 metal-dependent phosphohydrolase YP_002462921.1 PFAM: response regulator receiver; KEGG: cau:Caur_1874 response regulator receiver YP_002462922.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_002462923.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: cau:Caur_1872 molybdopterin biosynthesis MoaE protein YP_002462924.1 TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: thiamineS protein; KEGG: cau:Caur_1871 molybdopterin converting factor, subunit 1 YP_002462925.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_1870 short-chain dehydrogenase/reductase SDR YP_002462926.1 KEGG: cau:Caur_1869 hypothetical protein YP_002462927.1 PFAM: DNA photolyase FAD-binding; KEGG: syd:Syncc9605_0218 deoxyribodipyrimidine photo-lyase family protein YP_002462928.1 KEGG: cau:Caur_1867 hypothetical protein YP_002462929.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cau:Caur_1865 ATPase YP_002462930.1 PFAM: ATP-NAD/AcoX kinase; KEGG: cau:Caur_1066 ATP-NAD/AcoX kinase YP_002462931.1 PFAM: N-6 Adenine-specific DNA methylase; KEGG: cau:Caur_1067 hypothetical protein YP_002462932.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: cau:Caur_1864 N-acetylmuramoyl-L-alanine amidase YP_002462933.1 KEGG: cau:Caur_1863 hypothetical protein YP_002462934.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; GAF domain protein; PAS fold-4 domain protein; KEGG: cau:Caur_1862 response regulator receiver YP_002462935.1 KEGG: cau:Caur_1861 hypothetical protein YP_002462936.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1860 sigma-70 family RNA polymerase sigma factor YP_002462937.1 KEGG: cau:Caur_1859 hypothetical protein YP_002462938.1 PFAM: histone deacetylase superfamily; KEGG: cau:Caur_1858 histone deacetylase superfamily protein YP_002462939.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: cau:Caur_1857 CaCA family Na(+)/Ca(+) antiporter YP_002462940.1 PFAM: RNP-1 like RNA-binding protein; KEGG: cau:Caur_1856 RNP-1 like RNA-binding protein YP_002462941.1 PFAM: Polyprenyl synthetase; KEGG: cau:Caur_1855 polyprenyl synthetase YP_002462942.1 PFAM: Penicillinase repressor; KEGG: cau:Caur_1854 penicillinase repressor YP_002462943.1 KEGG: cau:Caur_1853 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_002462944.1 PFAM: protein of unknown function DUF520; KEGG: cau:Caur_1852 hypothetical protein YP_002462945.1 SMART: helix-turn-helix domain protein; KEGG: cau:Caur_1851 helix-turn-helix domain-containing protein YP_002462946.1 KEGG: cau:Caur_1850 hypothetical protein YP_002462948.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cau:Caur_1848 amidohydrolase YP_002462949.1 KEGG: cau:Caur_1847 hypothetical protein YP_002462950.1 PFAM: VanW family protein; KEGG: cau:Caur_1055 VanW family protein YP_002462951.1 PFAM: CBS domain containing protein; Rubredoxin-type Fe(Cys)4 protein; KEGG: cau:Caur_1971 CBS domain-containing protein YP_002462952.1 KEGG: cau:Caur_1972 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_002462953.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_1973 transketolase central region YP_002462954.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: cau:Caur_1974 dihydrolipoyllysine-residue succinyltransferase YP_002462955.1 PFAM: Rhodanese domain protein; KEGG: cau:Caur_1975 rhodanese domain-containing protein YP_002462956.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_1732 short-chain dehydrogenase/reductase SDR YP_002462957.1 KEGG: cau:Caur_1976 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002462958.1 KEGG: cau:Caur_1977 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002462959.1 KEGG: cau:Caur_1978 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_002462960.1 KEGG: cau:Caur_1979 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) YP_002462961.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: cau:Caur_1980 NADH-ubiquinone oxidoreductase chain 4L YP_002462962.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: cau:Caur_1981 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_002462963.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: cau:Caur_1982 NADH dehydrogenase (quinone) YP_002462964.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cau:Caur_1983 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002462965.1 KEGG: cau:Caur_1984 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_002462966.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: cau:Caur_1985 NADH (or F420H2) dehydrogenase, subunit C YP_002462967.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_002462968.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: cau:Caur_1987 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_002462969.1 PFAM: Forkhead-associated protein; KEGG: cau:Caur_1988 forkhead-associated protein YP_002462970.1 PFAM: Forkhead-associated protein; KEGG: cau:Caur_1989 forkhead-associated protein YP_002462971.1 PFAM: peptidase M22 glycoprotease; KEGG: cau:Caur_1990 peptidase M22 glycoprotease YP_002462972.1 PFAM: protein of unknown function UPF0079; KEGG: cau:Caur_1991 hypothetical protein YP_002462973.1 KEGG: cau:Caur_1992 hypothetical protein YP_002462974.1 KEGG: cau:Caur_1054 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002462975.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1053 glycosyl transferase family protein YP_002462976.1 TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: cau:Caur_1052 photosynthetic reaction center subunit L YP_002462977.1 TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: cau:Caur_1051 photosynthetic reaction center subunit M YP_002462978.1 KEGG: cau:Caur_1050 hypothetical protein YP_002462979.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1049 ABC transporter related YP_002462980.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_1048 methyltransferase type 11 YP_002462982.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_2354 sulfate transporter/antisigma-factor antagonist STAS YP_002462983.1 PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: cau:Caur_1608 AAA-4 family protein YP_002462984.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cau:Caur_1288 integrase domain-containing protein YP_002462985.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_1287 alpha/beta hydrolase fold-containing protein YP_002462986.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: cau:Caur_1286 peptidase S10 serine carboxypeptidase YP_002462987.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG domain protein; KEGG: cau:Caur_1285 GTP-binding protein Obg/CgtA YP_002462988.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: cau:Caur_1284 twin arginine-targeting protein translocase YP_002462989.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1283 glycosyl transferase group 1 YP_002462990.1 KEGG: cau:Caur_1282 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_002462991.1 PFAM: Radical SAM domain protein; KEGG: cau:Caur_1281 radical SAM domain-containing protein YP_002462992.1 PFAM: peptidase U32; KEGG: cau:Caur_1280 peptidase U32 YP_002462993.1 KEGG: cau:Caur_1279 leucyl aminopeptidase (aminopeptidase T)-like protein YP_002462994.1 KEGG: rca:Rcas_0562 hypothetical protein YP_002462995.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_002462996.1 KEGG: cau:Caur_0975 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3 YP_002462997.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_002462998.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_1439 beta-lactamase domain-containing protein YP_002462999.1 KEGG: cau:Caur_1438 hypothetical protein YP_002463000.1 KEGG: cau:Caur_1437 hypothetical protein YP_002463001.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1436 major facilitator transporter YP_002463002.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_002463003.1 PFAM: glycoside hydrolase family 13 domain protein; KEGG: cau:Caur_1032 glycoside hydrolase family 13 protein YP_002463004.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_002463005.1 KEGG: cau:Caur_0972 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_002463006.1 KEGG: cau:Caur_0971 hypothetical protein YP_002463007.1 KEGG: cau:Caur_0970 hypothetical protein YP_002463008.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0969 ABC transporter related YP_002463009.1 KEGG: cau:Caur_1165 hypothetical protein YP_002463010.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_002463011.1 PFAM: regulatory protein MarR; KEGG: cau:Caur_1167 regulatory protein MarR YP_002463012.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cau:Caur_1168 RND family efflux transporter MFP subunit YP_002463013.1 PFAM: protein of unknown function DUF214; KEGG: cau:Caur_1169 hypothetical protein YP_002463014.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_1170 NAD-dependent epimerase/dehydratase YP_002463015.1 KEGG: cau:Caur_1171 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein YP_002463016.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: cau:Caur_1172 histidinol-phosphate aminotransferase YP_002463017.1 KEGG: cau:Caur_1173 hypothetical protein YP_002463019.1 KEGG: smt:Smal_0710 transcriptional regulator, ArsR family YP_002463020.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4617 ABC transporter related YP_002463021.1 PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_5583 ABC transporter, permease protein YP_002463022.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cau:Caur_1157 periplasmic binding protein/LacI transcriptional regulator YP_002463023.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_1078 extracellular solute-binding protein YP_002463024.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1077 binding-protein-dependent transport systems inner membrane component YP_002463025.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1076 binding-protein-dependent transport systems inner membrane component YP_002463026.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: cau:Caur_1075 glycoside hydrolase family 3 protein YP_002463027.1 PFAM: glycoside hydrolase family 16; KEGG: cau:Caur_1074 glycoside hydrolase family protein YP_002463028.1 PFAM: glycoside hydrolase family 3 domain protein; PA14 domain protein; KEGG: cau:Caur_1073 glycoside hydrolase family 3 protein YP_002463029.1 KEGG: cau:Caur_1656 hypothetical protein YP_002463030.1 KEGG: cau:Caur_1655 hypothetical protein YP_002463031.1 PFAM: Phosphoglycerate mutase; KEGG: cau:Caur_1654 phosphoglycerate mutase YP_002463032.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cau:Caur_1649 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002463033.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1761 glycosyl transferase group 1 YP_002463034.1 KEGG: cau:Caur_1762 LIM zinc-binding protein YP_002463035.1 PFAM: phospholipase/Carboxylesterase; KEGG: cau:Caur_1763 phospholipase/carboxylesterase YP_002463036.1 PFAM: Peptidoglycan-binding LysM; KEGG: cau:Caur_1764 peptidoglycan-binding LysM YP_002463037.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: cau:Caur_1765 transcription attenuator LytR YP_002463038.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_1766 stage II sporulation E family protein YP_002463039.1 PFAM: Aldehyde Dehydrogenase; KEGG: cau:Caur_1767 aldehyde dehydrogenase YP_002463040.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_1768 extracellular solute-binding protein YP_002463041.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_1769 extracellular solute-binding protein YP_002463042.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_1770 ATPase domain-containing protein YP_002463043.1 PFAM: response regulator receiver; KEGG: cau:Caur_1771 response regulator receiver YP_002463044.1 PFAM: Lytic transglycosylase catalytic; KEGG: cau:Caur_0981 lytic transglycosylase catalytic YP_002463045.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: cau:Caur_1657 sulfate transporter/antisigma-factor antagonist STAS YP_002463046.1 PFAM: cytochrome c class I; KEGG: hau:Haur_3763 cytochrome c class I YP_002463047.1 KEGG: cau:Caur_1183 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein YP_002463048.1 KEGG: cau:Caur_1182 colicin V production protein YP_002463049.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1181 major facilitator transporter YP_002463050.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: cau:Caur_1116 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_002463051.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: cau:Caur_1115 ribonuclease III YP_002463052.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_1114 dTDP-4-dehydrorhamnose reductase YP_002463053.1 KEGG: aba:Acid345_3128 hypothetical protein YP_002463054.1 KEGG: mlo:mll5670 hypothetical protein YP_002463055.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_1113 alcohol dehydrogenase YP_002463056.1 PFAM: UvrD/REP helicase; KEGG: cau:Caur_1834 UvrD/REP helicase YP_002463057.1 PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: cau:Caur_1835 serine/threonine protein kinase YP_002463058.1 KEGG: cau:Caur_1836 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_002463059.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_002463060.1 PFAM: mannose-6-phosphate isomerase type I; KEGG: cau:Caur_1838 mannose-6-phosphate isomerase YP_002463061.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; KEGG: cau:Caur_1839 ribosomal protein L11 methyltransferase YP_002463062.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002463063.1 TIGRFAM: serine O-acetyltransferase; KEGG: cau:Caur_1841 serine O-acetyltransferase YP_002463064.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: cau:Caur_1842 FmdB family regulatory protein YP_002463065.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cau:Caur_1802 cysteine desulfurase family protein YP_002463066.1 KEGG: GF24314 gene product from transcript GF24314-RA YP_002463067.1 KEGG: cau:Caur_0904 hypothetical protein YP_002463068.1 KEGG: cau:Caur_0905 hypothetical protein YP_002463069.1 PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_2202 type II secretion system protein E YP_002463070.1 KEGG: cau:Caur_0907 ATPase involved in chromosome partitioning-like protein YP_002463071.1 PFAM: type II secretion system protein E; KEGG: cau:Caur_0908 type II secretion system protein E YP_002463072.1 PFAM: SAF domain protein; KEGG: cau:Caur_0909 SAF domain-containing protein YP_002463073.1 KEGG: cau:Caur_0910 hypothetical protein YP_002463074.1 PFAM: TadE family protein; KEGG: cau:Caur_0911 TadE family protein YP_002463075.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: cau:Caur_0912 hypothetical protein YP_002463076.1 KEGG: cau:Caur_0913 hypothetical protein YP_002463077.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: cau:Caur_0914 phosphoesterase PA-phosphatase related YP_002463078.1 PFAM: putative transposase IS891/IS1136/IS1341 family; KEGG: rca:Rcas_2076 IS605 family transposase OrfB YP_002463079.1 KEGG: tfu:Tfu_1323 transposase-related protein YP_002463080.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002463081.1 KEGG: cau:Caur_1123 Zn-dependent hydrolase of the beta-lactamase fold-like protein YP_002463082.1 KEGG: LOC694775; hypothetical protein LOC694775 YP_002463083.1 PFAM: regulatory protein RecX; KEGG: cau:Caur_1124 regulatory protein RecX YP_002463084.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_002463085.1 PFAM: protein of unknown function DUF427; KEGG: cau:Caur_1361 hypothetical protein YP_002463086.1 PFAM: extracellular solute-binding protein family 5; KEGG: cau:Caur_1362 4-phytase YP_002463087.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1363 binding-protein-dependent transport systems inner membrane component YP_002463088.1 KEGG: cau:Caur_1364 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_002463089.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1365 binding-protein-dependent transport systems inner membrane component YP_002463091.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002463092.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: rca:Rcas_3651 IS605 family transposase OrfB YP_002463093.1 KEGG: cau:Caur_1094 NADH-ubiquinone oxidoreductase chain 49kDa YP_002463094.1 KEGG: cau:Caur_1095 hypothetical protein YP_002463095.1 KEGG: cau:Caur_1096 hypothetical protein YP_002463096.1 KEGG: cau:Caur_1097 NADH/ubiquinone/plastoquinone (complex I) YP_002463097.1 KEGG: cau:Caur_1098 hypothetical protein YP_002463098.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1099 ABC transporter related YP_002463099.1 KEGG: cau:Caur_1100 hypothetical protein YP_002463100.1 PFAM: Peptidase M23; KEGG: cau:Caur_1101 peptidase M23B YP_002463101.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002463102.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: cau:Caur_1601 amidophosphoribosyltransferase YP_002463103.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: cau:Caur_1602 peptidase S8 and S53 subtilisin kexin sedolisin YP_002463104.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_1396 ATPase domain-containing protein YP_002463105.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: cau:Caur_1397 response regulator receiver YP_002463106.1 KEGG: cau:Caur_1398 peptidase domain-containing protein YP_002463107.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_1399 adenylyl cyclase class-3/4/guanylyl cyclase YP_002463108.1 KEGG: cau:Caur_1400 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_002463109.1 KEGG: cau:Caur_1401 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase YP_002463110.1 KEGG: cau:Caur_0893 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_002463111.1 KEGG: cau:Caur_1831 hypothetical protein YP_002463112.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_1832 histidine kinase YP_002463113.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_1833 response regulator receiver YP_002463114.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cau:Caur_1102 Orn/DAP/Arg decarboxylase 2 YP_002463115.1 PFAM: Amidase; KEGG: cau:Caur_1600 amidase YP_002463116.1 PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: cau:Caur_1599 peptidase M16C associated domain-containing protein YP_002463117.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1598 glycosyl transferase family protein YP_002463118.1 KEGG: cau:Caur_1597 hypothetical protein YP_002463119.1 KEGG: cau:Caur_1596 hypothetical protein YP_002463120.1 KEGG: cau:Caur_1595 hypothetical protein YP_002463121.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1594 glycosyl transferase group 1 YP_002463122.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1591 major facilitator transporter YP_002463123.1 KEGG: cau:Caur_1590 hypothetical protein YP_002463124.1 PFAM: protein of unknown function DUF95 transmembrane; ABC-2 type transporter; KEGG: cau:Caur_1589 hypothetical protein YP_002463125.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1588 ABC transporter related YP_002463126.1 KEGG: cau:Caur_1587 hypothetical protein YP_002463127.1 KEGG: cau:Caur_1586 hypothetical protein YP_002463128.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: cau:Caur_1448 glutamine synthetase, type I YP_002463129.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: cau:Caur_1572 myo-inositol-1-phosphate synthase YP_002463130.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1571 glycosyl transferase family protein YP_002463131.1 KEGG: cau:Caur_1570 nitrite reductase, copper-containing; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3 YP_002463132.1 PFAM: HpcH/HpaI aldolase; KEGG: cau:Caur_1569 HpcH/HpaI aldolase YP_002463133.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cau:Caur_1568 cyclic nucleotide-binding YP_002463134.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_1566 GCN5-related N-acetyltransferase YP_002463135.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cau:Caur_1565 enoyl-CoA hydratase/isomerase YP_002463136.1 KEGG: LOC100018249; similar to splicing coactivator subunit SRm300 YP_002463137.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cau:Caur_1564 ATPase YP_002463139.1 PFAM: restriction modification system DNA specificity domain; KEGG: rrs:RoseRS_2689 restriction modification system DNA specificity subunit YP_002463140.1 KEGG: mca:MCA0837 hypothetical protein YP_002463141.1 KEGG: rrs:RoseRS_2687 HsdR family type I site-specific deoxyribonuclease; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases YP_002463142.1 PFAM: protein of unknown function DUF45; KEGG: rca:Rcas_4387 hypothetical protein YP_002463143.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: cau:Caur_1562 intradiol ring-cleavage dioxygenase YP_002463146.1 KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein YP_002463147.1 KEGG: WIPF2, LOC771898; WAS/WASL interacting protein family, member 2 YP_002463148.1 PFAM: WD-40 repeat protein; NB-ARC domain protein; Two component regulator propeller; SMART: Pyrrolo-quinoline quinone; AAA ATPase; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein YP_002463149.1 KEGG: hau:Haur_0779 hypothetical protein YP_002463150.1 TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: cau:Caur_1968 glucose-1-phosphate thymidyltransferase YP_002463151.1 PFAM: dihydrodipicolinate synthetase; KEGG: cau:Caur_1967 dihydrodipicolinate synthetase YP_002463152.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_002463153.1 KEGG: cau:Caur_1964 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_002463154.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_1963 alcohol dehydrogenase YP_002463155.1 PFAM: Methyltransferase type 11; KEGG: cau:Caur_1962 methyltransferase type 11 YP_002463156.1 KEGG: cau:Caur_1961 hypothetical protein YP_002463157.1 PFAM: glycosyl transferase family 9; KEGG: cau:Caur_1960 glycosyl transferase family protein YP_002463158.1 PFAM: Peptidoglycan-binding LysM; KEGG: cau:Caur_1957 peptidoglycan-binding LysM YP_002463159.1 KEGG: cau:Caur_1956 hypothetical protein YP_002463160.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1955 anti-anti-sigma factor YP_002463161.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1954 cellulose synthase (UDP-forming) YP_002463162.1 PFAM: cellulose synthase subunit B; KEGG: cau:Caur_1953 hypothetical protein YP_002463163.1 KEGG: cau:Caur_1952 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_002463164.1 PFAM: blue (type 1) copper domain protein; KEGG: cau:Caur_1950 blue (type 1) copper domain protein YP_002463165.1 PFAM: (Uracil-5)-methyltransferase; KEGG: cau:Caur_1949 (uracil-5)-methyltransferase YP_002463166.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1948 sulfate transporter/antisigma-factor antagonist STAS YP_002463167.1 KEGG: cau:Caur_1947 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_002463168.1 PFAM: aminodeoxychorismate lyase; KEGG: cau:Caur_1945 aminodeoxychorismate lyase YP_002463169.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: cau:Caur_1944 shikimate 5-dehydrogenase YP_002463170.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: cau:Caur_1943 peptidase A24A domain-containing protein YP_002463171.1 PFAM: Nucleotidyl transferase; KEGG: cau:Caur_1942 nucleotidyl transferase YP_002463172.1 PFAM: adenylosuccinate synthetase; KEGG: cau:Caur_1941 adenylosuccinate synthase YP_002463173.1 KEGG: cau:Caur_1940 acetylornithine and succinylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_002463174.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_1040 methyltransferase type 11 YP_002463175.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_002463176.1 KEGG: cau:Caur_1038 hypothetical protein YP_002463177.1 KEGG: cau:Caur_1037 hypothetical protein YP_002463178.1 KEGG: cau:Caur_1036 hypothetical protein YP_002463180.1 PFAM: GAF domain protein; KEGG: cau:Caur_1035 GAF domain-containing protein YP_002463181.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cau:Caur_1034 ATPase YP_002463182.1 KEGG: cau:Caur_1033 hypothetical protein YP_002463183.1 PFAM: cytochrome c assembly protein; KEGG: cau:Caur_0941 cytochrome c assembly protein YP_002463184.1 KEGG: cau:Caur_0940 hypothetical protein YP_002463185.1 KEGG: cau:Caur_0939 hypothetical protein YP_002463186.1 PFAM: cytochrome c assembly protein; KEGG: cau:Caur_0938 cytochrome c assembly protein YP_002463187.1 PFAM: heat shock protein DnaJ domain protein; KEGG: cau:Caur_0937 heat shock protein DnaJ domain-containing protein YP_002463188.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; heat shock protein DnaJ domain protein; Redoxin domain protein; KEGG: cau:Caur_0936 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002463189.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_0935 response regulator receiver YP_002463190.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0934 ABC transporter related YP_002463191.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0933 ABC transporter related YP_002463192.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_0932 inner-membrane translocator YP_002463193.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_0931 inner-membrane translocator YP_002463194.1 PFAM: Extracellular ligand-binding receptor; KEGG: cau:Caur_0930 extracellular ligand-binding receptor YP_002463195.1 KEGG: cau:Caur_0929 hypothetical protein YP_002463196.1 PFAM: alanine racemase domain protein; KEGG: cau:Caur_0928 alanine racemase domain-containing protein YP_002463197.1 KEGG: cau:Caur_0927 glycoprotease family metalloendopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_002463198.1 KEGG: cau:Caur_1558 hypothetical protein YP_002463199.1 KEGG: cau:Caur_1557 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM extracellular region; SMART: metal-dependent phosphohydrolase HD region YP_002463200.1 KEGG: cau:Caur_1556 GatB/YqeY domain-containing protein YP_002463201.1 Essential for recycling GMP and indirectly, cGMP YP_002463202.1 PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: cau:Caur_1554 fibronectin-binding A domain-containing protein YP_002463203.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cau:Caur_1553 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002463205.1 protein associated with Co2+ and Mg2+ efflux YP_002463206.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: cau:Caur_1551 peptidase S9 prolyl oligopeptidase YP_002463207.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: cau:Caur_1550 transcription attenuator LytR YP_002463208.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate and N-acetyl-L-aminoadipate to form N-acetyl-L-aminoadipate 5-phosphate in arginine and lysine biosynthesis YP_002463209.1 PFAM: cell wall hydrolase/autolysin; KEGG: cau:Caur_1088 cell wall hydrolase/autolysin YP_002463210.1 KEGG: cau:Caur_1089 hypothetical protein YP_002463211.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: cau:Caur_1090 hypothetical protein YP_002463212.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: cau:Caur_1091 hypothetical protein YP_002463213.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_1092 alpha/beta hydrolase fold-containing protein YP_002463214.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: cau:Caur_1827 transketolase YP_002463215.1 KEGG: cau:Caur_1828 hypothetical protein YP_002463216.1 KEGG: cau:Caur_1829 hypothetical protein YP_002463217.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002463218.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cau:Caur_1134 single-stranded-DNA-specific exonuclease RecJ YP_002463219.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_1135 extracellular solute-binding protein YP_002463220.1 PFAM: response regulator receiver; histidine kinase HAMP region domain protein; SMART: GAF domain protein; KEGG: cau:Caur_1137 response regulator receiver YP_002463221.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002463222.1 KEGG: cau:Caur_1143 hypothetical protein YP_002463223.1 PFAM: FAD linked oxidase domain protein; KEGG: cau:Caur_1144 FAD linked oxidase domain-containing protein YP_002463224.1 PFAM: FAD linked oxidase domain protein; KEGG: cau:Caur_1145 FAD linked oxidase domain-containing protein YP_002463225.1 KEGG: cau:Caur_1146 hypothetical protein YP_002463226.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1147 glycosyl transferase family protein YP_002463227.1 PFAM: cyclic nucleotide-binding; KEGG: cau:Caur_1148 cyclic nucleotide-binding YP_002463228.1 PFAM: extracellular solute-binding protein family 5; KEGG: cau:Caur_1149 extracellular solute-binding protein YP_002463229.1 KEGG: cau:Caur_1150 AAA ATPase YP_002463230.1 KEGG: cau:Caur_1404 hypothetical protein YP_002463231.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002463232.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cau:Caur_1429 peptidase M20 YP_002463233.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: cau:Caur_1430 sortase family protein YP_002463234.1 KEGG: cau:Caur_1431 hypothetical protein YP_002463235.1 PFAM: putative RNA methylase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_1432 methyltransferase type 12 YP_002463236.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_002463237.1 PFAM: ribonuclease H; KEGG: cau:Caur_1275 ribonuclease H YP_002463238.1 PFAM: regulatory protein MarR; iron dependent repressor; KEGG: cau:Caur_1128 iron dependent repressor YP_002463239.1 PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; KEGG: cau:Caur_1127 adenylyl cyclase class-3/4/guanylyl cyclase YP_002463240.1 PFAM: PSP1 domain protein; KEGG: cau:Caur_1126 PSP1 domain-containing protein YP_002463241.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_1125 beta-lactamase domain-containing protein YP_002463242.1 PFAM: UvrD/REP helicase; KEGG: cau:Caur_1305 UvrD/REP helicase YP_002463243.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cau:Caur_1304 LysR substrate-binding YP_002463244.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_1303 histidine kinase dimerisation and phosphoacceptor region YP_002463245.1 KEGG: rca:Rcas_1125 hypothetical protein YP_002463246.1 PFAM: Flp/Fap pilin component; KEGG: cau:Caur_1302 Flp/Fap pilin component YP_002463247.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1603 EmrB/QacA family drug resistance transporter YP_002463248.1 KEGG: cau:Caur_1604 hypothetical protein YP_002463249.1 PFAM: Forkhead-associated protein; KEGG: cau:Caur_1605 forkhead-associated protein YP_002463250.1 PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: cau:Caur_1606 CBS domain-containing protein YP_002463251.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_1607 NAD-dependent epimerase/dehydratase YP_002463252.1 KEGG: cau:Caur_1289 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_002463253.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_1290 short-chain dehydrogenase/reductase SDR YP_002463254.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: cau:Caur_1292 iojap-like protein YP_002463255.1 PFAM: protein of unknown function DUF88; KEGG: aav:Aave_4318 protein of unknown function DUF88 YP_002463256.1 PFAM: Appr-1-p processing domain protein; KEGG: cau:Caur_1293 appr-1-p processing domain-containing protein YP_002463257.1 PFAM: PspC domain protein; KEGG: cau:Caur_1294 PspC domain-containing protein YP_002463258.1 PFAM: protein of unknown function DUF92 transmembrane; KEGG: cau:Caur_1295 hypothetical protein YP_002463259.1 KEGG: cau:Caur_1296 cyclase/dehydrase YP_002463260.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1297 Bcr/CflA subfamily drug resistance transporter YP_002463261.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_1298 GCN5-related N-acetyltransferase YP_002463262.1 KEGG: cau:Caur_1299 hypothetical protein YP_002463263.1 KEGG: cau:Caur_1300 radical SAM domain-containing protein YP_002463264.1 PFAM: VanW family protein; KEGG: cau:Caur_1301 VanW family protein YP_002463265.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: cau:Caur_1131 peptidase M14 carboxypeptidase A YP_002463266.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_1132 protein phosphatase 2C-like protein YP_002463267.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: cau:Caur_1133 DNA mismatch repair protein MutL YP_002463269.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: cau:Caur_1389 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_002463270.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cau:Caur_1449 cysteine desulfurase NifS YP_002463271.1 KEGG: cau:Caur_1450 hypothetical protein YP_002463272.1 PFAM: NMT1/THI5 like domain protein; KEGG: hypothetical protein YP_002463273.1 KEGG: cau:Caur_1452 hypothetical protein YP_002463274.1 KEGG: cau:Caur_1453 hypothetical protein YP_002463275.1 KEGG: cau:Caur_1454 hypothetical protein YP_002463276.1 KEGG: cau:Caur_1455 hypothetical protein YP_002463277.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: cau:Caur_1456 methionine aminopeptidase, type I YP_002463278.1 PFAM: methylenetetrahydrofolate reductase; KEGG: cau:Caur_1457 methylenetetrahydrofolate reductase YP_002463279.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cau:Caur_1458 cystathionine gamma-synthase YP_002463280.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_1460 GCN5-related N-acetyltransferase YP_002463281.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: cau:Caur_1461 acetyl-CoA acetyltransferase YP_002463282.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_002463283.1 KEGG: cau:Caur_1463 hypothetical protein YP_002463284.1 PFAM: transcriptional activator domain; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_1464 transcriptional activator domain-containing protein YP_002463285.1 KEGG: cau:Caur_1465 hypothetical protein YP_002463286.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: cau:Caur_1466 UreA amidolyase related protein YP_002463287.1 KEGG: BB014433; expressed sequence BB014433 YP_002463288.1 PFAM: Allophanate hydrolase subunit 1; KEGG: cau:Caur_1314 allophanate hydrolase subunit 1 YP_002463289.1 PFAM: LamB/YcsF family protein; KEGG: cau:Caur_1315 LamB/YcsF family protein YP_002463290.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1316 major facilitator transporter YP_002463291.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1317 glycosyl transferase group 1 YP_002463292.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1318 glycosyl transferase family protein YP_002463293.1 KEGG: rca:Rcas_0764 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase YP_002463294.1 PFAM: glycosyl transferase group 1; KEGG: prw:PsycPRwf_0244 glycosyl transferase, group 1 YP_002463295.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: mba:Mbar_A0025 hypothetical protein YP_002463296.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sde:Sde_0484 putative methyltransferase YP_002463298.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rca:Rcas_0781 glutamine--scyllo-inositol transaminase YP_002463299.1 KEGG: rca:Rcas_0785 oxidoreductase domain-containing protein YP_002463300.1 KEGG: rca:Rcas_0788 hypothetical protein YP_002463301.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rca:Rcas_0783 hexapaptide repeat-containing transferase YP_002463302.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rca:Rcas_0784 UDP-N-acetylglucosamine 2-epimerase YP_002463303.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cau:Caur_1516 phosphomannomutase YP_002463304.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1318 glycosyl transferase family protein YP_002463305.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: cau:Caur_1500 lipopolysaccharide biosynthesis protein YP_002463306.1 KEGG: cau:Caur_1501 hypothetical protein YP_002463307.1 KEGG: cau:Caur_1504 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002463308.1 KEGG: pcr:Pcryo_0623 hypothetical protein YP_002463309.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_4429 hexapaptide repeat-containing transferase YP_002463310.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_4431 oxidoreductase domain-containing protein YP_002463312.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: dge:Dgeo_2647 WecB/TagA/CpsF family glycosyl transferase YP_002463313.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dge:Dgeo_2646 NAD-dependent epimerase/dehydratase YP_002463314.1 KEGG: cau:Caur_1514 TPR repeat-containing protein YP_002463315.1 KEGG: pfl:PFL_5099 O-unit flippase, putative YP_002463317.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cau:Caur_1516 phosphomannomutase YP_002463318.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: cau:Caur_1517 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_002463319.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: cau:Caur_1518 protein of unknown function UPF0052 and CofD YP_002463320.1 PFAM: lipolytic protein G-D-S-L family; KEGG: cau:Caur_0944 GDSL family lipase YP_002463321.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: cau:Caur_0945 polysaccharide biosynthesis protein CapD YP_002463322.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cau:Caur_0946 DegT/DnrJ/EryC1/StrS aminotransferase YP_002463323.1 KEGG: cau:Caur_0947 hexapaptide repeat-containing transferase YP_002463324.1 PFAM: sugar transferase; KEGG: cau:Caur_0948 undecaprenyl-phosphate galactose phosphotransferase YP_002463325.1 KEGG: cau:Caur_0949 hypothetical protein YP_002463326.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002463327.1 KEGG: cau:Caur_0951 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase YP_002463328.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: cau:Caur_1319 dihydroxyacetone kinase, L subunit YP_002463329.1 TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: cau:Caur_1320 dihydroxyacetone kinase, phosphotransfer subunit YP_002463330.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: cau:Caur_1321 HPr family phosphocarrier protein YP_002463331.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: cau:Caur_1322 phosphoenolpyruvate-protein phosphotransferase YP_002463332.1 PFAM: Na-Ca exchanger/integrin-beta4; KEGG: cau:Caur_1388 Na-Ca exchanger/integrin-beta4 YP_002463333.1 KEGG: cau:Caur_1387 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002463334.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_1386 beta-lactamase domain-containing protein YP_002463335.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1385 glycosyl transferase group 1 YP_002463336.1 PFAM: initiation factor 2B related; KEGG: cau:Caur_1384 initiation factor 2B related YP_002463337.1 KEGG: cau:Caur_1383 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002463338.1 PFAM: PfkB domain protein; KEGG: cau:Caur_1382 ribokinase-like domain-containing protein YP_002463339.1 PFAM: photosystem I assembly BtpA; KEGG: cau:Caur_1381 photosystem I assembly BtpA YP_002463340.1 KEGG: cau:Caur_1380 hypothetical protein YP_002463341.1 PFAM: NLP/P60 protein; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: cau:Caur_1585 NLP/P60 protein YP_002463343.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; KEGG: cau:Caur_1584 histidine kinase YP_002463344.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cau:Caur_1583 single-strand binding protein YP_002463345.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cau:Caur_1341 cysteine synthase A YP_002463346.1 KEGG: cau:Caur_1342 hypothetical protein YP_002463347.1 KEGG: rca:Rcas_3902 hypothetical protein YP_002463348.1 PFAM: ferric-uptake regulator; KEGG: rca:Rcas_3901 ferric uptake regulator family protein YP_002463349.1 KEGG: rca:Rcas_3899 hypothetical protein YP_002463350.1 KEGG: rrs:RoseRS_0596 hypothetical protein YP_002463351.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rrs:RoseRS_0595 CRP/FNR family transcriptional regulator YP_002463352.1 PFAM: permease; KEGG: rca:Rcas_3894 permease YP_002463353.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cau:Caur_1346 enoyl-CoA hydratase/isomerase YP_002463354.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: cau:Caur_1347 4-hydroxyphenylacetate 3-hydroxylase YP_002463355.1 KEGG: cau:Caur_1348 catechol 2,3 dioxygenase; TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_002463356.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: cau:Caur_1349 transcriptional regulator IclR YP_002463357.1 catalyzes the formation of acetyl-CoA from acetalaldehyde YP_002463358.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate YP_002463359.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cau:Caur_1352 flavin reductase domain-containing protein YP_002463360.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: cau:Caur_1354 4-oxalocrotonate tautomerase YP_002463361.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cau:Caur_1355 hydratase/decarboxylase YP_002463362.1 PFAM: Aldehyde Dehydrogenase; KEGG: cau:Caur_1356 aldehyde dehydrogenase YP_002463363.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cau:Caur_1357 4-oxalocrotonate decarboxylase YP_002463364.1 KEGG: cau:Caur_1358 hypothetical protein YP_002463365.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cau:Caur_1969 uroporphyrin-III C/tetrapyrrole methyltransferase YP_002463366.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_1970 NAD-dependent epimerase/dehydratase YP_002463367.1 PFAM: periplasmic solute binding protein; KEGG: cau:Caur_1993 periplasmic solute binding protein YP_002463368.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1994 ABC transporter related YP_002463369.1 PFAM: ABC-3 protein; KEGG: cau:Caur_1995 ABC-3 protein YP_002463370.1 KEGG: cau:Caur_1996 putative poly-gamma-glutamate biosynthesis (capsule formation)-like protein YP_002463371.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: cau:Caur_1997 response regulator receiver YP_002463372.1 KEGG: cau:Caur_1998 hypothetical protein YP_002463373.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ YP_002463374.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: cau:Caur_2000 ferric reductase domain-containing protein YP_002463375.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_2001 response regulator receiver YP_002463376.1 KEGG: cau:Caur_2002 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_002463377.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cau:Caur_2003 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_002463378.1 PFAM: helix-turn-helix- domain containing protein AraC type; periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_0894 ATPase domain-containing protein YP_002463379.1 KEGG: cau:Caur_1138 tetratricopeptide TPR_4 YP_002463381.1 KEGG: cau:Caur_1139 hypothetical protein YP_002463383.1 KEGG: kcr:Kcr_0638 hypothetical protein YP_002463384.1 PFAM: peptidase M50; KEGG: cau:Caur_1118 peptidase M50 YP_002463385.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rrs:RoseRS_3934 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_002463386.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cau:Caur_1467 polysaccharide biosynthesis protein YP_002463387.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1468 glycosyl transferase family protein YP_002463388.1 PFAM: response regulator receiver; KEGG: cau:Caur_1469 response regulator receiver YP_002463389.1 KEGG: cau:Caur_1470 RsbW protein, putative YP_002463390.1 PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_1471 stage II sporulation E family protein YP_002463391.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1472 anti-anti-sigma factor YP_002463392.1 PFAM: transferase hexapeptide repeat containing protein; sugar transferase; Nucleotidyl transferase; KEGG: cau:Caur_1473 nucleotidyl transferase YP_002463393.1 KEGG: cau:Caur_1474 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: anti-anti-sigma factor; glycosyl transferase, WecB/TagA/CpsF family; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; glycosyl transferase WecB/TagA/CpsF YP_002463394.1 PFAM: sugar transferase; KEGG: cau:Caur_1475 undecaprenyl-phosphate galactose phosphotransferase YP_002463395.1 KEGG: cau:Caur_1476 alpha-L-arabinofuranosidase-like protein YP_002463396.1 KEGG: cau:Caur_1477 hypothetical protein YP_002463397.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cau:Caur_1478 hexapaptide repeat-containing transferase YP_002463398.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: cau:Caur_1479 lipopolysaccharide biosynthesis protein YP_002463399.1 KEGG: cau:Caur_1480 ATPase involved in chromosome partitioning-like protein YP_002463400.1 KEGG: cau:Caur_1481 hypothetical protein YP_002463401.1 KEGG: cau:Caur_1482 hypothetical protein YP_002463402.1 KEGG: cau:Caur_1483 hypothetical protein YP_002463403.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_0889 glycosyl transferase family protein YP_002463404.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0890 glycosyl transferase group 1 YP_002463405.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0891 glycosyl transferase group 1 YP_002463406.1 PFAM: NHL repeat containing protein; KEGG: cau:Caur_0892 hypothetical protein YP_002463408.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: cau:Caur_1119 GDP-mannose 4,6-dehydratase YP_002463409.1 catalyzes the interconversion of succinyl-CoA and succinate YP_002463410.1 KEGG: cau:Caur_1151 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_002463411.1 KEGG: cau:Caur_1158 hypothetical protein YP_002463412.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_1159 alpha amylase catalytic region YP_002463413.1 KEGG: cau:Caur_1160 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: aminoglycoside phosphotransferase; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002463414.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain YP_002463415.1 KEGG: cau:Caur_1162 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002463416.1 PFAM: glycoside hydrolase family 57; KEGG: cau:Caur_1163 glycoside hydrolase family protein YP_002463417.1 KEGG: cau:Caur_1164 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002463418.1 PFAM: dehydrogenase E1 component; KEGG: cau:Caur_1693 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) YP_002463419.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_1692 transketolase central region YP_002463420.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: cau:Caur_1691 dehydrogenase catalytic domain-containing protein YP_002463421.1 KEGG: rca:Rcas_4420 hypothetical protein YP_002463422.1 KEGG: cau:Caur_1259 polysaccharide deacetylase YP_002463423.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: cau:Caur_1258 aminotransferase class V YP_002463425.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dsy:DSY1084 hypothetical protein YP_002463426.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cau:Caur_1278 cyclic nucleotide-binding YP_002463427.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_1337 FAD dependent oxidoreductase YP_002463428.1 KEGG: cau:Caur_1338 hypothetical protein YP_002463429.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_1339 TPR repeat-containing protein YP_002463430.1 KEGG: cau:Caur_1340 hypothetical protein YP_002463431.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cau:Caur_0953 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit YP_002463432.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cau:Caur_0952 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002463433.1 KEGG: cau:Caur_1207 superfamily I DNA/RNA helicase YP_002463434.1 KEGG: cau:Caur_1206 hypothetical protein YP_002463435.1 KEGG: cau:Caur_1205 ATPase domain-containing protein YP_002463436.1 KEGG: cau:Caur_1231 hypothetical protein YP_002463437.1 KEGG: cau:Caur_1232 hypothetical protein YP_002463438.1 PFAM: Rhodanese domain protein; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cau:Caur_1233 sulphate transporter YP_002463439.1 PFAM: Rhodanese domain protein; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: cau:Caur_1233 sulphate transporter YP_002463440.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_002463441.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: cau:Caur_1407 methylated-DNA--protein-cysteine methyltransferase YP_002463442.1 KEGG: cau:Caur_1408 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like YP_002463443.1 KEGG: cau:Caur_1409 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_002463444.1 KEGG: cau:Caur_1410 hypothetical protein YP_002463445.1 catalyzes the formation of L-tryptophan from indole and L-serine YP_002463447.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: pna:Pnap_1833 transposase, IS605 OrfB family YP_002463448.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_1413 phytoene desaturase YP_002463449.1 PFAM: CheW domain protein; KEGG: cau:Caur_1414 CheW domain-containing protein YP_002463450.1 KEGG: cau:Caur_1415 hypothetical protein YP_002463451.1 PFAM: Abortive infection protein; KEGG: mth:MTH623 hypothetical protein YP_002463452.1 KEGG: cau:Caur_1416 hypothetical protein YP_002463453.1 KEGG: cau:Caur_1417 isoprenylcysteine carboxyl methyltransferase YP_002463454.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_002463455.1 TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: cau:Caur_1419 xanthine phosphoribosyltransferase YP_002463456.1 PFAM: protein of unknown function DUF151; KEGG: cau:Caur_1420 hypothetical protein YP_002463457.1 PFAM: Peptidoglycan-binding LysM; protein of unknown function DUF1058; SH3 type 3 domain protein; Peptidase M23; SMART: SH3 domain protein; KEGG: cau:Caur_1421 peptidase M23B YP_002463458.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cau:Caur_1422 cobyrinic acid ac-diamide synthase YP_002463459.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cau:Caur_1423 ParB-like partition protein YP_002463460.1 PFAM: PfkB domain protein; KEGG: cau:Caur_1424 ribokinase-like domain-containing protein YP_002463461.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cau:Caur_1425 CDP-alcohol phosphatidyltransferase YP_002463462.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: cau:Caur_1426 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_002463463.1 KEGG: cau:Caur_1427 hypothetical protein YP_002463464.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: cau:Caur_1405 cell wall anchor domain-containing protein YP_002463465.1 PFAM: SAF domain protein; KEGG: cau:Caur_1213 SAF domain-containing protein YP_002463466.1 KEGG: cau:Caur_1214 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_002463467.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: cau:Caur_1215 NAD-dependent epimerase/dehydratase YP_002463468.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cau:Caur_1216 glucose-1-phosphate cytidylyltransferase YP_002463469.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_1217 NAD-dependent epimerase/dehydratase YP_002463470.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_1218 NAD-dependent epimerase/dehydratase YP_002463471.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cau:Caur_1219 glutamine--scyllo-inositol transaminase YP_002463472.1 KEGG: drm:Dred_2110 Flp/Fap pilin component YP_002463473.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: cau:Caur_1220 cyclic nucleotide-binding YP_002463474.1 PFAM: alpha/beta hydrolase fold; KEGG: ENSORLG00000012743; . ; K01175 YP_002463475.1 KEGG: cau:Caur_1221 glucose/sorbosone dehydrogenase-like protein YP_002463476.1 KEGG: cau:Caur_1621 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; helicase c2; DEAD-like helicases YP_002463477.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_1519 alpha/beta hydrolase fold-containing protein YP_002463478.1 KEGG: cau:Caur_1520 hypothetical protein YP_002463479.1 KEGG: cau:Caur_1521 hypothetical protein YP_002463480.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1522 glycosyl transferase group 1 YP_002463481.1 KEGG: cau:Caur_1523 hypothetical protein YP_002463482.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: cau:Caur_1524 cytochrome c biogenesis protein transmembrane region YP_002463483.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_1525 NUDIX hydrolase YP_002463484.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: cau:Caur_1526 trigger factor YP_002463485.1 PFAM: peptidase S14 ClpP; KEGG: cau:Caur_1527 endopeptidase Clp YP_002463486.1 binds and unfolds substrates as part of the ClpXP protease YP_002463487.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_1529 response regulator receiver YP_002463488.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_002463489.1 PFAM: glycosyl transferase family 4; KEGG: cau:Caur_1531 glycosyl transferase family protein YP_002463490.1 KEGG: cau:Caur_1447 hypothetical protein YP_002463491.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cau:Caur_1212 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_002463494.1 PFAM: cobalt transport protein; KEGG: cau:Caur_1197 cobalt transport protein YP_002463495.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cau:Caur_1198 cobalamin 5'-phosphate synthase YP_002463496.1 PFAM: Phosphoglycerate mutase; KEGG: cau:Caur_1199 phosphoglycerate mutase YP_002463497.1 KEGG: cau:Caur_1200 hypothetical protein YP_002463498.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: cau:Caur_1201 cell wall anchor domain-containing protein YP_002463499.1 catalyzes N(2)-acetyl-L-lysine + H(2)O = acetate + L-lysine YP_002463500.1 KEGG: rca:Rcas_3651 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002463501.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002463502.1 PFAM: SAICAR synthetase; KEGG: cau:Caur_1261 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_002463503.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_002463504.1 KEGG: cau:Caur_1263 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: Histidine biosynthesis protein HisG domain; ATP phosphoribosyltransferase catalytic region YP_002463505.1 KEGG: cau:Caur_1264 hypothetical protein YP_002463506.1 KEGG: cau:Caur_1265 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase 2; histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_002463507.1 PFAM: response regulator receiver; KEGG: cau:Caur_1266 response regulator receiver YP_002463508.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_1267 histidine kinase YP_002463509.1 KEGG: cau:Caur_1268 hypothetical protein YP_002463510.1 PFAM: von Willebrand factor type A; KEGG: cau:Caur_1269 von Willebrand factor type A YP_002463511.1 KEGG: cau:Caur_1270 hypothetical protein YP_002463512.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1271 binding-protein-dependent transport systems inner membrane component YP_002463513.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1272 binding-protein-dependent transport systems inner membrane component YP_002463514.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_1273 extracellular solute-binding protein YP_002463515.1 KEGG: cau:Caur_1274 hypothetical protein YP_002463516.1 KEGG: cau:Caur_1129 hypothetical protein YP_002463517.1 PFAM: protein of unknown function DUF333; KEGG: cau:Caur_1689 hypothetical protein YP_002463518.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: cau:Caur_1690 uncharacterized peroxidase-related enzyme YP_002463519.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: cau:Caur_1235 RNA methyltransferase YP_002463520.1 KEGG: cau:Caur_0921 hypothetical protein YP_002463521.1 KEGG: hau:Haur_4269 hypothetical protein YP_002463522.1 KEGG: cau:Caur_1236 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: Miro domain protein; Ras family protein; SMART: Ras small GTPase, Ras type; Ras small GTPase, Rho type; Ras small GTPase, Rab type YP_002463523.1 KEGG: cau:Caur_1237 hypothetical protein YP_002463524.1 KEGG: cau:Caur_1238 hypothetical protein YP_002463525.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_1239 histidine kinase YP_002463526.1 PFAM: glycosyl transferase family 2; KEGG: sus:Acid_7495 glycosyl transferase family protein YP_002463527.1 PFAM: SpoVR family protein; KEGG: cau:Caur_0968 SpoVR family protein YP_002463528.1 PFAM: protein of unknown function DUF444; KEGG: cau:Caur_0967 hypothetical protein YP_002463529.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: cau:Caur_0966 serine protein kinase domain-containing protein YP_002463530.1 PFAM: Colicin V production protein; KEGG: cau:Caur_0965 colicin V production protein YP_002463531.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0964 glycosyl transferase group 1 YP_002463532.1 PFAM: Dynamin family protein; GTP-binding protein HSR1-related; Miro domain protein; KEGG: cau:Caur_0963 dynamin family protein YP_002463533.1 KEGG: cau:Caur_0962 hypothetical protein YP_002463534.1 PFAM: response regulator receiver; KEGG: cau:Caur_0961 response regulator receiver YP_002463535.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_0960 ATPase domain-containing protein YP_002463536.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_0959 response regulator receiver YP_002463537.1 KEGG: cau:Caur_0958 hypothetical protein YP_002463538.1 KEGG: cau:Caur_0956 hypothetical protein YP_002463539.1 PFAM: Fe-S metabolism associated SufE; KEGG: cau:Caur_0955 Fe-S metabolism associated SufE YP_002463541.1 PFAM: Aldehyde Dehydrogenase; KEGG: cau:Caur_0954 aldehyde dehydrogenase YP_002463542.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_1561 beta-lactamase domain-containing protein YP_002463543.1 KEGG: cau:Caur_1560 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002463544.1 KEGG: cau:Caur_1559 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002463545.1 KEGG: cau:Caur_0926 putative transmembrane anti-sigma factor YP_002463546.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_0925 sigma-70 family RNA polymerase sigma factor YP_002463547.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: cau:Caur_0924 deaminase-reductase domain-containing protein YP_002463548.1 PFAM: phosphatidylserine decarboxylase-related; KEGG: cau:Caur_0923 phosphatidylserine decarboxylase-related YP_002463549.1 PFAM: CBS domain containing protein; KEGG: cau:Caur_0922 CBS domain-containing protein YP_002463550.1 KEGG: cau:Caur_0921 hypothetical protein YP_002463551.1 KEGG: cau:Caur_0920 hypothetical protein YP_002463552.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_0919 methyltransferase type 11 YP_002463553.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_0918 methyltransferase type 11 YP_002463554.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cau:Caur_0917 fumarylacetoacetate (FAA) hydrolase YP_002463555.1 KEGG: cau:Caur_0916 hypothetical protein YP_002463557.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rca:Rcas_3693 DNA methylase N-4/N-6 domain-containing protein YP_002463558.1 KEGG: rca:Rcas_3694 hypothetical protein YP_002463559.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: xfm:Xfasm12_1670 DNA methyltransferase YP_002463560.1 KEGG: xfm:Xfasm12_1671 hypothetical protein YP_002463561.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cau:Caur_1242 DNA methylase N-4/N-6 domain-containing protein YP_002463562.1 PFAM: Restriction endonuclease BglII; KEGG: esi:Exig_2377 restriction endonuclease BglII YP_002463563.1 PFAM: formyl transferase domain protein; KEGG: bph:Bphy_3012 formyl transferase domain-containing protein YP_002463564.1 KEGG: cau:Caur_0915 hypothetical protein YP_002463565.1 PFAM: formyl transferase domain protein; KEGG: cau:Caur_2005 formyl transferase domain-containing protein YP_002463566.1 PFAM: Fe(II) trafficking protein YggX; KEGG: cau:Caur_2006 hypothetical protein YP_002463567.1 PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: cau:Caur_2007 phosphoribosylglycinamide synthetase YP_002463568.1 KEGG: rca:Rcas_1074 modification methylase NspV YP_002463569.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cau:Caur_2008 radical SAM domain-containing protein YP_002463570.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: cau:Caur_2009 transglutaminase domain-containing protein YP_002463571.1 PFAM: protein of unknown function DUF403; KEGG: cau:Caur_2010 hypothetical protein YP_002463572.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: cau:Caur_2011 hypothetical protein YP_002463573.1 PFAM: fatty acid desaturase; KEGG: cau:Caur_2012 stearoyl-CoA 9-desaturase YP_002463574.1 KEGG: cau:Caur_2013 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_002463575.1 PFAM: peptidase M42 family protein; KEGG: cau:Caur_2014 cellulase YP_002463576.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: cau:Caur_2015 polynucleotide adenylyltransferase region YP_002463577.1 KEGG: cau:Caur_2016 hypothetical protein YP_002463578.1 PFAM: Abortive infection protein; KEGG: cau:Caur_2017 abortive infection protein YP_002463579.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cau:Caur_2018 beta-phosphoglucomutase YP_002463580.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cau:Caur_2019 kojibiose phosphorylase YP_002463581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_2020 binding-protein-dependent transport systems inner membrane component YP_002463582.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_2021 binding-protein-dependent transport systems inner membrane component YP_002463583.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_2022 extracellular solute-binding protein YP_002463584.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cau:Caur_2023 alanine racemase YP_002463585.1 KEGG: HRNR; hornerin YP_002463586.1 PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cau:Caur_1532 cyclic nucleotide-binding YP_002463587.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: cau:Caur_1533 aldehyde ferredoxin oxidoreductase YP_002463588.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_002463589.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: cau:Caur_1535 glutamyl-tRNA synthetase YP_002463590.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_1536 alpha amylase catalytic region YP_002463591.1 KEGG: cau:Caur_1537 hypothetical protein YP_002463592.1 PFAM: Abortive infection protein; KEGG: cau:Caur_3265 abortive infection protein YP_002463593.1 KEGG: cau:Caur_0883 hypothetical protein YP_002463595.1 PFAM: protein of unknown function UPF0040; KEGG: cau:Caur_0884 hypothetical protein YP_002463597.1 KEGG: cau:Caur_0885 hypothetical protein YP_002463598.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: cau:Caur_0886 N-acetylmuramoyl-L-alanine amidase YP_002463599.1 PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: cau:Caur_0887 tubulin/FtsZ GTPase YP_002463600.1 KEGG: cau:Caur_0888 hypothetical protein YP_002463601.1 PFAM: restriction endonuclease; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: cau:Caur_1678 restriction endonuclease YP_002463602.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002463603.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002463604.1 KEGG: cau:Caur_0901 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_002463605.1 Catalyzes the reversible oxidation of malate to oxaloacetate YP_002463606.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_0899 ATPase domain-containing protein YP_002463607.1 KEGG: cau:Caur_0898 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase YP_002463608.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cau:Caur_0897 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002463609.1 KEGG: cau:Caur_0895 hypothetical protein YP_002463610.1 TIGRFAM: sugar transporter superfamily protein; KEGG: cau:Caur_1395 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein YP_002463611.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_1394 beta-lactamase-like protein YP_002463612.1 KEGG: cau:Caur_1393 metal-dependent hydrolase YP_002463613.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: cau:Caur_1392 ribosomal subunit interface protein YP_002463614.1 KEGG: cau:Caur_1391 hypothetical protein YP_002463615.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_002463616.1 KEGG: cmi:CMM_2463 hypothetical protein YP_002463617.1 KEGG: rca:Rcas_0143 hypothetical protein YP_002463618.1 KEGG: asa:ASA_2557 hypothetical protein YP_002463619.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_0142 methyltransferase type 12 YP_002463620.1 PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_0459 glycosyl transferase family protein YP_002463621.1 KEGG: cau:Caur_1366 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_002463622.1 KEGG: cau:Caur_1434 hypothetical protein YP_002463623.1 KEGG: ENSAPMG00000016874. YP_002463624.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463625.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463626.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463627.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463628.1 PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463629.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463630.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463631.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463632.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_1499 sigma-70 family RNA polymerase sigma factor YP_002463633.1 PFAM: Protein of unknown function DUF1626; KEGG: rca:Rcas_2328 hypothetical protein YP_002463634.1 SMART: AAA ATPase; KEGG: cau:Caur_1255 magnesium chelatase YP_002463635.1 PFAM: protein of unknown function DUF503; KEGG: cau:Caur_1254 hypothetical protein YP_002463636.1 PFAM: peptidase S16 lon domain protein; KEGG: cau:Caur_1253 peptidase S16 lon domain-containing protein YP_002463637.1 KEGG: cau:Caur_1252 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_002463638.1 PFAM: methyltransferase small; SMART: PUA domain containing protein; KEGG: cau:Caur_1251 PUA domain-containing protein YP_002463639.1 PFAM: aldo/keto reductase; KEGG: cau:Caur_1250 aldo/keto reductase YP_002463640.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cau:Caur_1249 pyridoxal-5'-phosphate-dependent protein beta subunit YP_002463641.1 KEGG: cau:Caur_1248 hypothetical protein YP_002463642.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: cau:Caur_1247 ribosome small subunit-dependent GTPase A YP_002463643.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_1246 GCN5-related N-acetyltransferase YP_002463644.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1245 glycosyl transferase group 1 YP_002463645.1 PFAM: protein of unknown function DUF255; KEGG: cau:Caur_1244 hypothetical protein YP_002463646.1 KEGG: cau:Caur_1241 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_002463647.1 KEGG: mar:MAE_31990 adenine specific DNA methyltransferase YP_002463648.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pph:Ppha_2196 DNA methylase N-4/N-6 domain protein YP_002463649.1 KEGG: cau:Caur_3158 hypothetical protein YP_002463650.1 PFAM: YbbR family protein; KEGG: cau:Caur_1576 YbbR family protein YP_002463651.1 PFAM: protein of unknown function DUF147; KEGG: cau:Caur_1577 hypothetical protein YP_002463652.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_1578 TPR repeat-containing protein YP_002463653.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: cau:Caur_1579 ornithine carbamoyltransferase YP_002463654.1 PFAM: IstB domain protein ATP-binding protein; Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: cau:Caur_1580 IstB ATP binding domain-containing protein YP_002463655.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: cau:Caur_1581 primosome, DnaD subunit YP_002463656.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1582 major facilitator transporter YP_002463657.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: cau:Caur_1688 excinuclease ABC, A subunit YP_002463658.1 PFAM: pentapeptide repeat protein; KEGG: cau:Caur_1686 pentapeptide repeat-containing protein YP_002463659.1 KEGG: cau:Caur_1685 4-vinyl reductase 4VR YP_002463660.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_1684 extracellular solute-binding protein YP_002463661.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1683 ornithine carbamoyltransferase YP_002463662.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1682 binding-protein-dependent transport systems inner membrane component YP_002463663.1 KEGG: cau:Caur_1681 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_002463664.1 PFAM: peptidase M24; KEGG: cau:Caur_1230 peptidase M24 YP_002463665.1 KEGG: cau:Caur_1229 hypothetical protein YP_002463666.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: cau:Caur_1228 cell divisionFtsK/SpoIIIE YP_002463667.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_002463668.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_002463669.1 KEGG: cau:Caur_1225 hypothetical protein YP_002463670.1 TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: cau:Caur_1224 death-on-curing family protein YP_002463671.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cau:Caur_1223 NAD-dependent epimerase/dehydratase YP_002463672.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: cau:Caur_1222 phospholipid/glycerol acyltransferase YP_002463673.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: cau:Caur_1622 response regulator receiver YP_002463674.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: cau:Caur_1623 maf protein YP_002463675.1 KEGG: cau:Caur_1624 ABC-type dipeptide transport system periplasmic component-like protein YP_002463677.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1625 binding-protein-dependent transport systems inner membrane component YP_002463678.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1626 binding-protein-dependent transport systems inner membrane component YP_002463679.1 KEGG: cau:Caur_1627 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_002463680.1 KEGG: cau:Caur_1628 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_002463681.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: cau:Caur_1629 nuclease SbcCD, D subunit YP_002463682.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1634 glycosyl transferase family protein YP_002463683.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cau:Caur_1640 hexapaptide repeat-containing transferase YP_002463684.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1641 glycosyl transferase family protein YP_002463685.1 KEGG: cau:Caur_1642 serine acetyltransferase YP_002463686.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1643 glycosyl transferase group 1 YP_002463687.1 KEGG: cau:Caur_1644 hypothetical protein YP_002463688.1 KEGG: cau:Caur_1645 hypothetical protein YP_002463689.1 KEGG: cau:Caur_1647 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit YP_002463690.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: cau:Caur_1648 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_002463691.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: cau:Caur_1031 X-Pro dipeptidyl-peptidase domain-containing protein YP_002463692.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cau:Caur_1030 acyl-CoA dehydrogenase domain-containing protein YP_002463693.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1029 binding-protein-dependent transport systems inner membrane component YP_002463694.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_1028 binding-protein-dependent transport systems inner membrane component YP_002463695.1 PFAM: extracellular solute-binding protein family 5; KEGG: cau:Caur_1027 extracellular solute-binding protein YP_002463696.1 KEGG: cau:Caur_1026 hypothetical protein YP_002463697.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cau:Caur_1025 PpiC-type peptidyl-prolyl cis-trans isomerase YP_002463698.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: cau:Caur_1024 single-strand binding protein YP_002463699.1 PFAM: ribosomal protein S6; KEGG: cau:Caur_1023 ribosomal protein S6 YP_002463700.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: cau:Caur_1022 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_002463701.1 KEGG: cau:Caur_1020 hypothetical protein YP_002463702.1 KEGG: cau:Caur_1680 hypothetical protein YP_002463703.1 KEGG: cau:Caur_1679 hypothetical protein YP_002463704.1 KEGG: cau:Caur_1677 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_002463705.1 PFAM: response regulator receiver; KEGG: cau:Caur_1676 response regulator receiver YP_002463706.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Lactate/malate dehydrogenase; KEGG: cau:Caur_1675 L-lactate dehydrogenase YP_002463707.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1674 sulfate transporter/antisigma-factor antagonist STAS YP_002463708.1 PFAM: ATP-binding region ATPase domain protein; KEGG: cau:Caur_1673 ATPase domain-containing protein YP_002463709.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_1672 TPR repeat-containing protein YP_002463710.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_1671 stage II sporulation E family protein YP_002463711.1 KEGG: cau:Caur_1670 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein YP_002463712.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: cau:Caur_1669 protein-glutamate methylesterase YP_002463713.1 PFAM: response regulator receiver; KEGG: cau:Caur_1668 response regulator receiver YP_002463714.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: cau:Caur_1667 response regulator receiver YP_002463715.1 PFAM: chemotaxis sensory transducer; KEGG: cau:Caur_1666 chemotaxis sensory transducer YP_002463716.1 KEGG: cau:Caur_1665 hypothetical protein YP_002463717.1 PFAM: CheW domain protein; KEGG: cau:Caur_1664 CheW domain-containing protein YP_002463718.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_002463719.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_1008 alpha/beta hydrolase fold-containing protein YP_002463722.1 KEGG: cau:Caur_1009 hypothetical protein YP_002463723.1 PFAM: cytochrome oxidase assembly; KEGG: cau:Caur_1010 cytochrome oxidase assembly YP_002463724.1 PFAM: peptidase M20; KEGG: cau:Caur_1011 peptidase M20 YP_002463725.1 PFAM: extracellular solute-binding protein family 1; KEGG: hau:Haur_1722 extracellular solute-binding protein YP_002463726.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hau:Haur_1721 binding-protein-dependent transport systems inner membrane component YP_002463727.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1012 anti-anti-sigma factor YP_002463728.1 PFAM: cyclic nucleotide-binding; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_1013 stage II sporulation E family protein YP_002463729.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: cau:Caur_1014 heat repeat-containing PBS lyase YP_002463730.1 KEGG: cau:Caur_1015 hypothetical protein YP_002463732.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1086 ABC transporter related YP_002463733.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_1085 AMP-dependent synthetase and ligase YP_002463734.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_1084 inner-membrane translocator YP_002463735.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_1083 inner-membrane translocator YP_002463736.1 KEGG: cau:Caur_1082 ABC-type branched-chain amino acid transport systems periplasmic component-like protein YP_002463737.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1081 ABC transporter related YP_002463738.1 KEGG: cau:Caur_1080 coenzyme F390 synthetase-like protein YP_002463739.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cau:Caur_1662 iron-containing alcohol dehydrogenase YP_002463740.1 KEGG: cau:Caur_1007 hypothetical protein YP_002463741.1 KEGG: cau:Caur_1006 hypothetical protein YP_002463742.1 KEGG: cau:Caur_1005 hypothetical protein YP_002463743.1 KEGG: cau:Caur_1003 integral membrane protein YP_002463744.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cau:Caur_1002 ammonium transporter YP_002463745.1 KEGG: cau:Caur_1000 hypothetical protein YP_002463746.1 PFAM: regulatory protein TetR; KEGG: cau:Caur_0999 regulatory protein TetR YP_002463747.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cau:Caur_0998 RND family efflux transporter MFP subunit YP_002463748.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0997 ABC transporter related YP_002463749.1 PFAM: protein of unknown function DUF214; KEGG: cau:Caur_0996 hypothetical protein YP_002463750.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: cau:Caur_0995 SH3 type 3 domain-containing protein YP_002463751.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_0994 amine oxidase YP_002463752.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_002463753.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cau:Caur_0992 glyoxalase/bleomycin resistance protein/dioxygenase YP_002463754.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0991 glycosyl transferase group 1 YP_002463755.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_002463756.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: cau:Caur_0989 beta-lactamase domain-containing protein YP_002463757.1 KEGG: cau:Caur_0988 hypothetical protein YP_002463758.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: cau:Caur_0987 phage SPO1 DNA polymerase-related protein YP_002463759.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cau:Caur_0986 DNA methylase N-4/N-6 domain-containing protein YP_002463760.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_0985 glycosyl transferase family protein YP_002463761.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cau:Caur_0984 ATPase YP_002463762.1 KEGG: cau:Caur_0983 hypothetical protein YP_002463763.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0982 glycosyl transferase group 1 YP_002463764.1 PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF1294; KEGG: neu:NE0717 cold shock DNA-binding domain-containing protein YP_002463765.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: cau:Caur_1772 carbamoyl-phosphate synthase, large subunit YP_002463766.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1773 ABC transporter related YP_002463767.1 PFAM: Forkhead-associated protein; peptidase C11 clostripain; KEGG: cau:Caur_1775 forkhead-associated protein YP_002463768.1 PFAM: ATP-binding region ATPase domain protein; KEGG: cau:Caur_1776 histidine kinase YP_002463769.1 TIGRFAM: mevalonate kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: cau:Caur_0880 mevalonate kinase YP_002463770.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_002463771.1 KEGG: cau:Caur_0882 hypothetical protein YP_002463772.1 KEGG: cau:Caur_1541 hypothetical protein YP_002463773.1 KEGG: hau:Haur_1711 FAD dependent oxidoreductase YP_002463774.1 KEGG: cau:Caur_1540 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_002463775.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: syn:slr1983 two-component response regulator YP_002463776.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1539 glycosyl transferase group 1 YP_002463777.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cau:Caur_1538 ferredoxin--NADP(+) reductase YP_002463778.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: cau:Caur_1543 cell divisionFtsK/SpoIIIE YP_002463779.1 KEGG: cau:Caur_1544 hypothetical protein YP_002463780.1 KEGG: cau:Caur_1545 hypothetical protein YP_002463781.1 KEGG: cau:Caur_1546 hypothetical protein YP_002463782.1 KEGG: cau:Caur_1547 hypothetical protein YP_002463783.1 TIGRFAM: hydrogenase maturation protease; KEGG: cau:Caur_1189 hydrogenase maturation protease YP_002463784.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: cau:Caur_1188 nickel-dependent hydrogenase large subunit YP_002463785.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cau:Caur_1187 NADH ubiquinone oxidoreductase 20 kDa subunit YP_002463786.1 with HoxF and HoxE catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution YP_002463787.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: cau:Caur_1185 NADH dehydrogenase (quinone) YP_002463788.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cau:Caur_1184 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_002463789.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_002463790.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1307 sulfate transporter/antisigma-factor antagonist STAS YP_002463791.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1308 sulfate transporter/antisigma-factor antagonist STAS YP_002463792.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1309 sulfate transporter/antisigma-factor antagonist STAS YP_002463793.1 KEGG: cau:Caur_1310 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Prolyl-tRNA synthetase, class II-like YP_002463794.1 KEGG: cau:Caur_1311 hypothetical protein YP_002463795.1 KEGG: cau:Caur_1312 hypothetical protein YP_002463796.1 KEGG: cau:Caur_1313 alpha-1,6-glucosidase, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002463797.1 molecular chaperone YP_002463798.1 KEGG: cau:Caur_1179 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002463799.1 PFAM: protein of unknown function DUF59; KEGG: cau:Caur_1178 hypothetical protein YP_002463800.1 PFAM: regulatory protein ArsR; KEGG: cau:Caur_1177 regulatory protein ArsR YP_002463801.1 PFAM: manganese and iron superoxide dismutase; KEGG: cau:Caur_1176 superoxide dismutase YP_002463802.1 PFAM: glycosyl transferase group 1; KEGG: amr:AM1_5546 glycosyl transferase, group 1 family protein YP_002463803.1 KEGG: cau:Caur_1175 hypothetical protein YP_002463804.1 KEGG: cau:Caur_1174 hypothetical protein YP_002463806.1 KEGG: cau:Caur_1016 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_002463807.1 PFAM: fumarate lyase; delta crystallin domain protein; KEGG: cau:Caur_1443 fumarate lyase YP_002463808.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1658 ABC transporter related YP_002463809.1 PFAM: aminotransferase class V; KEGG: cau:Caur_1659 aminotransferase class V YP_002463811.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_002463812.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: cau:Caur_1661 peptide methionine sulfoxide reductase YP_002463813.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cau:Caur_1190 CDP-alcohol phosphatidyltransferase YP_002463814.1 KEGG: cau:Caur_1191 hypothetical protein YP_002463815.1 KEGG: cau:Caur_1192 hypothetical protein YP_002463816.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; KEGG: cau:Caur_1193 competence/damage-inducible protein CinA YP_002463817.1 KEGG: cau:Caur_1194 hypothetical protein YP_002463818.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: cau:Caur_1195 threonyl-tRNA synthetase YP_002463819.1 KEGG: cau:Caur_1196 hypothetical protein YP_002463820.1 PFAM: protein of unknown function DUF990; KEGG: cau:Caur_0977 hypothetical protein YP_002463821.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1801 glycosyl transferase group 1 YP_002463822.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1800 ABC transporter related YP_002463823.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: cau:Caur_1799 nucleotidyl transferase YP_002463824.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: cau:Caur_1798 response regulator receiver YP_002463825.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cau:Caur_1797 mandelate racemase/muconate lactonizing protein YP_002463826.1 KEGG: cau:Caur_1796 hypothetical protein YP_002463827.1 TIGRFAM: alanine racemase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; alanine racemase domain protein; Mur ligase middle domain protein; KEGG: cau:Caur_1795 alanine racemase YP_002463828.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002463829.1 KEGG: cau:Caur_2047 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_002463830.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_2048 alpha/beta hydrolase fold-containing protein YP_002463831.1 KEGG: cau:Caur_2041 ABC-2 type transporter YP_002463832.1 KEGG: cau:Caur_2042 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_002463833.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_002463834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_2044 AMP-dependent synthetase and ligase YP_002463835.1 PFAM: gamma-glutamyltranspeptidase; AMP-dependent synthetase and ligase; KEGG: cau:Caur_2044 AMP-dependent synthetase and ligase YP_002463836.1 PFAM: gamma-glutamyltranspeptidase; KEGG: cau:Caur_2045 gamma-glutamyltransferase YP_002463837.1 KEGG: cau:Caur_1440 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_002463838.1 PFAM: helix-hairpin-helix motif; HhH-GPD family protein; Endonuclease III FCL domain protein; SMART: iron-sulfur cluster loop; KEGG: cau:Caur_1441 HhH-GPD family protein YP_002463839.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_1442 histidine kinase YP_002463840.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_002463841.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: cau:Caur_1375 succinic semialdehyde dehydrogenase YP_002463842.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_1376 amine oxidase YP_002463843.1 PFAM: Amidase; KEGG: cau:Caur_1377 amidase YP_002463844.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: cau:Caur_1378 acetyl-CoA carboxylase, biotin carboxylase YP_002463845.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cau:Caur_1323 cupin 2 domain-containing protein YP_002463846.1 PFAM: regulatory protein ArsR; Protein-tyrosine phosphatase, low molecular weight; KEGG: cau:Caur_1324 low molecular weight phosphotyrosine protein phosphatase YP_002463847.1 TIGRFAM: modification methylase, HemK family; PFAM: putative RNA methylase; methyltransferase small; ribosomal L11 methyltransferase; KEGG: cau:Caur_1618 protein-(glutamine-N5) methyltransferase, release factor-specific YP_002463848.1 KEGG: cau:Caur_1619 hypothetical protein YP_002463849.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: cau:Caur_1620 alpha/beta hydrolase fold-containing protein YP_002463850.1 KEGG: cau:Caur_0943 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase YP_002463851.1 PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: cau:Caur_0942 cytochrome c-type biogenesis protein CcmB YP_002463852.1 KEGG: cau:Caur_1844 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase YP_002463853.1 KEGG: cau:Caur_1845 amidophosphoribosyltransferase-like protein YP_002463854.1 KEGG: mma:MM_3038 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002463855.1 KEGG: cau:Caur_1846 hypothetical protein YP_002463856.1 KEGG: cau:Caur_1056 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2 YP_002463857.1 PFAM: helix-hairpin-helix motif; KEGG: cau:Caur_1057 helix-hairpin-helix DNA-binding motif-containing protein YP_002463858.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_1058 alpha/beta hydrolase fold-containing protein YP_002463859.1 PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_1059 stage II sporulation E family protein YP_002463860.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1060 anti-anti-sigma factor YP_002463861.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1061 anti-anti-sigma factor YP_002463862.1 KEGG: cau:Caur_1062 hypothetical protein YP_002463863.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002463864.1 PFAM: protein of unknown function DUF159; KEGG: cau:Caur_1906 hypothetical protein YP_002463865.1 KEGG: cau:Caur_1907 hypothetical protein YP_002463866.1 KEGG: cau:Caur_1908 hypothetical protein YP_002463867.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: cau:Caur_1909 peptidase S8 and S53 subtilisin kexin sedolisin YP_002463868.1 KEGG: cau:Caur_1910 hypothetical protein YP_002463869.1 PFAM: aminotransferase class I and II; KEGG: cau:Caur_1911 aminotransferase class I and II YP_002463870.1 KEGG: cau:Caur_1912 hypothetical protein YP_002463871.1 KEGG: cau:Caur_1913 hypothetical protein YP_002463872.1 KEGG: cau:Caur_1915 hypothetical protein YP_002463873.1 KEGG: cau:Caur_1916 hypothetical protein YP_002463874.1 PFAM: regulatory protein LuxR; Kelch repeat-containing protein; Kelch repeat protein; KEGG: cau:Caur_1917 regulatory protein LuxR YP_002463875.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1918 glycosyl transferase group 1 YP_002463876.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1919 glycosyl transferase group 1 YP_002463877.1 KEGG: cau:Caur_1920 hypothetical protein YP_002463878.1 KEGG: cau:Caur_1921 hypothetical protein YP_002463879.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: cau:Caur_1922 homoserine dehydrogenase YP_002463880.1 PFAM: regulatory protein LuxR; KEGG: cau:Caur_1923 regulatory protein LuxR YP_002463881.1 KEGG: cau:Caur_1924 periplasmic sugar-binding protein YP_002463882.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1925 ABC transporter related YP_002463883.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_1926 inner-membrane translocator YP_002463884.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: cau:Caur_1927 response regulator receiver YP_002463885.1 PFAM: ABC transporter related; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: AAA ATPase; KEGG: cau:Caur_1928 ABC transporter related YP_002463886.1 KEGG: cau:Caur_1041 hypothetical protein YP_002463887.1 KEGG: cau:Caur_1939 hypothetical protein YP_002463888.1 KEGG: cau:Caur_1936 putative integral membrane protein YP_002463889.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_002463890.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: cau:Caur_1934 MazG nucleotide pyrophosphohydrolase YP_002463891.1 PFAM: inositol monophosphatase; KEGG: cau:Caur_1933 inositol monophosphatase YP_002463892.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: cau:Caur_1932 histidinol-phosphate aminotransferase YP_002463893.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: cau:Caur_1931 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_002463894.1 TIGRFAM: DNA polymerase III, delta prime subunit; SMART: AAA ATPase; KEGG: cau:Caur_1930 DNA polymerase III, delta prime subunit YP_002463895.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: cau:Caur_1929 DEAD/DEAH box helicase domain-containing protein YP_002463896.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: cau:Caur_0840 helicase domain-containing protein YP_002463897.1 KEGG: cau:Caur_0841 hypothetical protein YP_002463898.1 PFAM: cyclic nucleotide-binding; beta-lactamase domain protein; KEGG: cau:Caur_1042 cyclic nucleotide-binding YP_002463899.1 PFAM: protein of unknown function DUF28; KEGG: cau:Caur_1043 hypothetical protein YP_002463900.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_002463901.1 KEGG: cau:Caur_1045 hypothetical protein YP_002463902.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cau:Caur_1017 molybdopterin oxidoreductase YP_002463903.1 KEGG: cau:Caur_1018 hypothetical protein YP_002463904.1 KEGG: cau:Caur_1019 hypothetical protein YP_002463905.1 PFAM: PGAP1 family protein; KEGG: cau:Caur_1444 PGAP1 family protein YP_002463906.1 KEGG: NEMVEDRAFT_v1g210976; predicted protein YP_002463907.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: rca:Rcas_2227 excinuclease ABC subunit C YP_002463909.1 KEGG: cau:Caur_1445 hypothetical protein YP_002463910.1 KEGG: rca:Rcas_2950 hypothetical protein YP_002463911.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002463912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cau:Caur_2026 HAD family hydrolase YP_002463913.1 KEGG: cau:Caur_2031 hypothetical protein YP_002463914.1 PFAM: metallophosphoesterase; KEGG: cau:Caur_2032 metallophosphoesterase YP_002463915.1 KEGG: cau:Caur_2033 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_002463916.1 PFAM: carboxyl transferase; KEGG: cau:Caur_2034 propionyl-CoA carboxylase YP_002463917.1 PFAM: protein of unknown function DUF58; KEGG: cau:Caur_2035 hypothetical protein YP_002463918.1 PFAM: Indigoidine synthase A family protein; KEGG: cau:Caur_2036 indigoidine synthase A family protein YP_002463919.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: cau:Caur_2037 sigma-70 family RNA polymerase sigma factor YP_002463920.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; KEGG: cau:Caur_1803 peptidase S41 YP_002463921.1 PFAM: penicillin-binding protein transpeptidase; KEGG: cau:Caur_1804 peptidoglycan glycosyltransferase YP_002463922.1 PFAM: ATP-binding region ATPase domain protein; KEGG: cau:Caur_1805 ATPase domain-containing protein YP_002463923.1 KEGG: cau:Caur_1806 hypothetical protein YP_002463924.1 PFAM: regulatory protein MarR; KEGG: cau:Caur_1807 regulatory protein MarR YP_002463925.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1808 glycosyl transferase family protein YP_002463926.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cau:Caur_1809 hypothetical protein YP_002463927.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: hau:Haur_1720 ABC transporter related YP_002463928.1 PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; KEGG: cau:Caur_1817 CBS domain-containing protein YP_002463929.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: cau:Caur_2096 N-acetylmuramoyl-L-alanine amidase YP_002463930.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Cache domain protein; KEGG: cau:Caur_2095 histidine kinase YP_002463931.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_2094 histidine kinase YP_002463932.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2093 ABC transporter related YP_002463933.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2092 ABC transporter related YP_002463934.1 PFAM: antenna complex alpha/beta subunit; KEGG: cau:Caur_2091 antenna complex alpha/beta subunit YP_002463935.1 KEGG: cau:Caur_2090 hypothetical protein YP_002463936.1 KEGG: cau:Caur_2089 hypothetical protein YP_002463937.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cau:Caur_2088 bacteriochlorophyll/chlorophyll a synthase YP_002463938.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; KEGG: cau:Caur_2087 geranylgeranyl reductase YP_002463939.1 PFAM: blue (type 1) copper domain protein; KEGG: cau:Caur_2581 blue (type 1) copper domain protein YP_002463940.1 PFAM: dihydroorotate dehydrogenase; KEGG: cau:Caur_2081 dihydroorotate dehydrogenase YP_002463941.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: cau:Caur_2080 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002463942.1 KEGG: cau:Caur_2079 hypothetical protein YP_002463943.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0866 glycosyl transferase group 1 YP_002463944.1 KEGG: mta:Moth_0915 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein YP_002463945.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_002463946.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: rrs:RoseRS_0970 riboflavin synthase YP_002463947.1 KEGG: rrs:RoseRS_0970 riboflavin synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_002463948.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: cau:Caur_0865 carbamoyl-phosphate synthase, small subunit YP_002463949.1 KEGG: cau:Caur_0595 transcriptional regulator domain-containing protein YP_002463950.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cau:Caur_0861 mandelate racemase/muconate lactonizing protein YP_002463951.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: cau:Caur_0860 peptidylprolyl isomerase FKBP-type YP_002463952.1 PFAM: glutamine cyclotransferase; KEGG: cau:Caur_0859 glutamine cyclotransferase YP_002463953.1 PFAM: CBS domain containing protein; KEGG: cau:Caur_0858 CBS domain-containing protein YP_002463955.1 KEGG: cau:Caur_0857 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002463956.1 KEGG: cau:Caur_0847 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein YP_002463957.1 PFAM: ferredoxin; KEGG: cau:Caur_0846 ferredoxin YP_002463958.1 KEGG: rrs:RoseRS_3481 hypothetical protein YP_002463959.1 PFAM: cytochrome c class I; KEGG: cau:Caur_0845 cytochrome c class I YP_002463961.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: cau:Caur_0844 glutamine synthetase catalytic region YP_002463962.1 PFAM: UbiA prenyltransferase; KEGG: cau:Caur_0843 UbiA prenyltransferase YP_002463963.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_1782 sulfate transporter/antisigma-factor antagonist STAS YP_002463964.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rca:Rcas_1856 anti-sigma-factor antagonist YP_002463965.1 KEGG: abc:ACICU_00936 hypothetical protein YP_002463966.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: cau:Caur_2038 tRNA(Ile)-lysidine synthetase YP_002463967.1 KEGG: cau:Caur_2039 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002463968.1 KEGG: cau:Caur_2040 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_002463969.1 KEGG: cau:Caur_2050 hypothetical protein YP_002463970.1 KEGG: cau:Caur_2051 hypothetical protein YP_002463971.1 KEGG: rrs:RoseRS_3536 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002463972.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rrs:RoseRS_0595 CRP/FNR family transcriptional regulator YP_002463973.1 KEGG: rca:Rcas_3898 hypothetical protein YP_002463974.1 KEGG: rrs:RoseRS_0597 hypothetical protein YP_002463975.1 KEGG: cau:Caur_2052 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_002463976.1 PFAM: ribosomal protein S16; KEGG: cau:Caur_2053 ribosomal protein S16 YP_002463977.1 KEGG: cau:Caur_2054 RNA-binding protein YP_002463978.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: cau:Caur_2055 16S rRNA processing protein RimM YP_002463979.1 KEGG: cau:Caur_2056 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002463980.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: cau:Caur_2057 phosphoribosyl-ATP diphosphatase YP_002463981.1 involved in de novo purine biosynthesis YP_002463982.1 KEGG: cau:Caur_2059 hypothetical protein YP_002463983.1 KEGG: cau:Caur_2060 hypothetical protein YP_002463984.1 PFAM: Roadblock/LC7 family protein; KEGG: cau:Caur_2061 roadblock/LC7 family protein YP_002463985.1 PFAM: Roadblock/LC7 family protein; KEGG: cau:Caur_2062 roadblock/LC7 family protein YP_002463986.1 KEGG: cau:Caur_2063 hypothetical protein YP_002463987.1 KEGG: cau:Caur_2064 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002463988.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF58; KEGG: cau:Caur_2065 hypothetical protein YP_002463989.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; FAD dependent oxidoreductase; KEGG: cau:Caur_2066 thioredoxin reductase YP_002463990.1 KEGG: cau:Caur_2067 hypothetical protein YP_002463991.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cau:Caur_2068 hydrolase YP_002463992.1 PFAM: response regulator receiver; KEGG: cau:Caur_2069 response regulator receiver YP_002463993.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: cau:Caur_2070 Glu/Leu/Phe/Val dehydrogenase YP_002463994.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_2071 GCN5-related N-acetyltransferase YP_002463996.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cau:Caur_2072 RNA methyltransferase YP_002463997.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: cau:Caur_2073 chaperone protein DnaJ YP_002463998.1 KEGG: cau:Caur_2074 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_002463999.1 PFAM: GrpE protein; KEGG: cau:Caur_2075 GrpE protein YP_002464000.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: cau:Caur_2076 heat-inducible transcription repressor HrcA YP_002464001.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cau:Caur_0867 peptidase M20 YP_002464002.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: cau:Caur_0868 heavy metal translocating P-type ATPase YP_002464003.1 SMART: AAA ATPase; KEGG: tth:TTC1430 hypothetical protein YP_002464004.1 KEGG: tth:TTC1429 hypothetical protein YP_002464005.1 KEGG: tth:TTC1428 hypothetical protein YP_002464006.1 KEGG: cau:Caur_0869 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_002464007.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cau:Caur_0870 single-strand binding protein YP_002464008.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: cau:Caur_0871 AsnC/Lrp family regulatory protein YP_002464009.1 KEGG: cau:Caur_0872 hypothetical protein YP_002464010.1 KEGG: cau:Caur_0873 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_002464011.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002464012.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_0875 histidine kinase YP_002464013.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_0876 response regulator receiver YP_002464014.1 KEGG: cau:Caur_0877 hypothetical protein YP_002464015.1 PFAM: aminoglycoside phosphotransferase; aminotransferase class-III; Peptidase M23; KEGG: cau:Caur_0878 hypothetical protein YP_002464016.1 KEGG: cau:Caur_0879 alpha-1,6-glucosidase, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_002464017.1 KEGG: cau:Caur_0837 hypothetical protein YP_002464018.1 KEGG: cau:Caur_0837 hypothetical protein YP_002464019.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: cau:Caur_0831 sigma-70 family RNA polymerase sigma factor YP_002464020.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: cau:Caur_0830 GTP-binding protein TypA YP_002464021.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cau:Caur_0829 hypothetical protein YP_002464022.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: rca:Rcas_0811 iron-sulfur cluster binding protein YP_002464023.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_0827 GCN5-related N-acetyltransferase YP_002464024.1 PFAM: protein of unknown function DUF162; KEGG: cau:Caur_0826 hypothetical protein YP_002464025.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: cau:Caur_0825 glyoxylate reductase YP_002464026.1 TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase; KEGG: cau:Caur_0824 RecD/TraA family helicase YP_002464027.1 KEGG: rca:Rcas_2505 hypothetical protein YP_002464028.1 KEGG: gur:Gura_0596 hypothetical protein YP_002464030.1 PFAM: protein of unknown function DUF214; KEGG: cau:Caur_0823 hypothetical protein YP_002464031.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0822 ABC transporter related YP_002464032.1 PFAM: secretion protein HlyD family protein; KEGG: cau:Caur_0821 secretion protein HlyD family protein YP_002464033.1 PFAM: regulatory protein TetR; KEGG: cau:Caur_0820 regulatory protein TetR YP_002464034.1 PFAM: NMT1/THI5 like domain protein; KEGG: cau:Caur_0817 NMT1/THI5-like domain-containing protein YP_002464035.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0816 binding-protein-dependent transport systems inner membrane component YP_002464036.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: cau:Caur_0813 electron transport protein SCO1/SenC YP_002464037.1 KEGG: cau:Caur_0812 hypothetical protein YP_002464038.1 KEGG: cau:Caur_0811 zinc finger SWIM domain-containing protein YP_002464039.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cau:Caur_0810 glycerophosphoryl diester phosphodiesterase YP_002464040.1 KEGG: cau:Caur_0809 hypothetical protein YP_002464041.1 KEGG: cau:Caur_0808 hypothetical protein YP_002464042.1 KEGG: cau:Caur_0807 hypothetical protein YP_002464043.1 KEGG: cau:Caur_0806 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_002464044.1 PFAM: transcriptional regulator TrmB; KEGG: cau:Caur_0805 transcriptional regulator TrmB YP_002464045.1 KEGG: cau:Caur_0804 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002464046.1 PFAM: protein of unknown function DUF512; KEGG: cau:Caur_1728 hypothetical protein YP_002464047.1 PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cau:Caur_1729 GAF domain-containing protein YP_002464048.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: cau:Caur_1730 glutamine amidotransferase of anthranilate synthase YP_002464049.1 KEGG: cau:Caur_1731 hypothetical protein YP_002464050.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_1732 short-chain dehydrogenase/reductase SDR YP_002464051.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: cau:Caur_1733 methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding YP_002464052.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cau:Caur_1734 major facilitator transporter YP_002464053.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_1736 alpha/beta hydrolase fold-containing protein YP_002464054.1 PFAM: polysaccharide deacetylase; KEGG: cau:Caur_1737 polysaccharide deacetylase YP_002464055.1 PFAM: ABC-2 type transporter; KEGG: cau:Caur_1738 ABC-2 type transporter YP_002464056.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_1739 ABC transporter related YP_002464057.1 KEGG: cau:Caur_1740 glycosyl transferase, group 1 YP_002464058.1 PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_2745 glycosyl transferase family protein YP_002464059.1 PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2745 glycosyl transferase family protein YP_002464060.1 PFAM: FG-GAP repeat protein; KEGG: cau:Caur_1744 pyrrolo-quinoline quinone YP_002464061.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_1745 NAD-dependent epimerase/dehydratase YP_002464062.1 KEGG: cau:Caur_1746 hypothetical protein YP_002464063.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_1747 glycosyl transferase group 1 YP_002464064.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: cau:Caur_1748 aminotransferase class V YP_002464065.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_1749 alpha/beta hydrolase fold-containing protein YP_002464066.1 Catalyzes the rate-limiting step in dNTP synthesis YP_002464067.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002464068.1 PFAM: TrkA-N domain protein; KEGG: cau:Caur_1752 TrkA domain-containing protein YP_002464069.1 PFAM: Amidohydrolase 3; KEGG: cau:Caur_1753 amidohydrolase 3 YP_002464070.1 PFAM: Auxin Efflux Carrier; KEGG: cau:Caur_1754 auxin efflux carrier YP_002464071.1 TIGRFAM: conserved repeat domain protein; KEGG: cau:Caur_1756 hypothetical protein YP_002464072.1 KEGG: cau:Caur_1757 hypothetical protein YP_002464073.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: cau:Caur_1758 FmdB family regulatory protein YP_002464074.1 PFAM: Nucleotidyl transferase; KEGG: cau:Caur_1759 nucleotidyl transferase YP_002464075.1 KEGG: cau:Caur_1760 hypothetical protein YP_002464076.1 PFAM: protein of unknown function DUF839; KEGG: rrs:RoseRS_1716 hypothetical protein YP_002464077.1 KEGG: rca:Rcas_1188 hypothetical protein YP_002464078.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cau:Caur_0839 NADH:flavin oxidoreductase/NADH oxidase YP_002464079.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_1549 major facilitator transporter YP_002464080.1 KEGG: cau:Caur_1548 beta-galactosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_002464081.1 PFAM: ABC-1 domain protein; KEGG: cau:Caur_1826 hypothetical protein YP_002464082.1 KEGG: cau:Caur_1825 hypothetical protein YP_002464083.1 KEGG: cau:Caur_1824 hypothetical protein YP_002464084.1 PFAM: DSBA oxidoreductase; KEGG: cau:Caur_1823 DsbA oxidoreductase YP_002464085.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cau:Caur_0680 lysine exporter protein LysE/YggA YP_002464086.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cau:Caur_0679 tRNA/rRNA methyltransferase (SpoU) YP_002464087.1 PFAM: FAD linked oxidase domain protein; KEGG: cau:Caur_0678 D-lactate dehydrogenase (cytochrome) YP_002464088.1 KEGG: cau:Caur_0677 PemK family protein YP_002464089.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: cau:Caur_0676 helix-turn-helix domain-containing protein YP_002464090.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_0673 AMP-dependent synthetase and ligase YP_002464091.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_0672 alpha/beta hydrolase fold-containing protein YP_002464092.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: cau:Caur_0671 alpha/beta hydrolase fold-containing protein YP_002464093.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002464094.1 KEGG: cau:Caur_0669 hypothetical protein YP_002464095.1 KEGG: cau:Caur_0668 hypothetical protein YP_002464096.1 PFAM: protein of unknown function DUF1385; KEGG: cau:Caur_0667 hypothetical protein YP_002464097.1 KEGG: cau:Caur_0666 hypothetical protein YP_002464098.1 TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: cau:Caur_0665 small GTP-binding protein YP_002464099.1 PFAM: histone family protein DNA-binding protein; KEGG: cau:Caur_0664 histone family protein DNA-binding protein YP_002464100.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: cau:Caur_0663 peptidase M1 membrane alanine aminopeptidase YP_002464101.1 KEGG: cau:Caur_0662 hypothetical protein YP_002464102.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_0661 histidine kinase dimerisation and phosphoacceptor region YP_002464103.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: cau:Caur_0660 response regulator receiver YP_002464104.1 KEGG: cau:Caur_0681 hypothetical protein YP_002464105.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: cau:Caur_0682 PucC protein YP_002464106.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_002464107.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: cau:Caur_0684 AsnC/Lrp family regulatory protein YP_002464108.1 PFAM: Acetamidase/Formamidase; KEGG: cau:Caur_0685 acetamidase/formamidase YP_002464109.1 KEGG: cau:Caur_0694 hypothetical protein YP_002464110.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_0695 TPR repeat-containing protein YP_002464111.1 PFAM: Roadblock/LC7 family protein; KEGG: cau:Caur_0696 roadblock/LC7 family protein YP_002464112.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_002464113.1 KEGG: cau:Caur_0698 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_002464114.1 PFAM: cell cycle protein; KEGG: cau:Caur_0699 cell cycle protein YP_002464115.1 PFAM: PfkB domain protein; KEGG: cau:Caur_0700 ribokinase-like domain-containing protein YP_002464116.1 KEGG: cau:Caur_0701 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_002464117.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: cau:Caur_0702 succinyl-CoA synthetase, alpha subunit YP_002464118.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_0703 GAF domain-containing protein YP_002464119.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: cau:Caur_0704 Rieske (2Fe-2S) domain-containing protein YP_002464120.1 PFAM: PspC domain protein; KEGG: cau:Caur_0706 PspC domain-containing protein YP_002464121.1 PFAM: metallophosphoesterase; KEGG: cau:Caur_0707 metallophosphoesterase YP_002464123.1 KEGG: cau:Caur_0708 hypothetical protein YP_002464124.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0709 glycosyl transferase group 1 YP_002464125.1 KEGG: cau:Caur_0710 membrane protein-like protein YP_002464126.1 KEGG: cau:Caur_0711 hypothetical protein YP_002464127.1 PFAM: Tetratricopeptide TPR_4; KEGG: cau:Caur_0712 tetratricopeptide TPR_4 YP_002464128.1 PFAM: transposase IS200-family protein; transposase IS605 OrfB; KEGG: sto:ST2553 transposase YP_002464129.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_0713 tetratricopeptide TPR_4 YP_002464130.1 PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3701 SARP family transcriptional regulator YP_002464131.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: cau:Caur_0775 VWA containing CoxE family protein YP_002464132.1 KEGG: cau:Caur_0774 hypothetical protein YP_002464133.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_0773 alpha/beta hydrolase fold-containing protein YP_002464134.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: cau:Caur_0772 TRAP transporter solute receptor TAXI family protein YP_002464135.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: cau:Caur_0771 TRAP transporter, 4TM/12TM fusion protein YP_002464136.1 PFAM: protein of unknown function DUF182; KEGG: cau:Caur_0770 hypothetical protein YP_002464137.1 KEGG: cau:Caur_0769 xanthine and Co dehydrogenase maturation factor YP_002464138.1 KEGG: cau:Caur_0768 hypothetical protein YP_002464139.1 KEGG: cau:Caur_0767 hypothetical protein YP_002464140.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: cau:Caur_0765 molybdenum cofactor biosynthesis protein C YP_002464141.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: cau:Caur_0764 MraZ protein YP_002464142.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: cau:Caur_0763 S-adenosyl-methyltransferase MraW YP_002464143.1 KEGG: cau:Caur_0762 hypothetical protein YP_002464144.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: cau:Caur_0761 peptidoglycan glycosyltransferase YP_002464145.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cau:Caur_0760 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_002464146.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002464147.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cau:Caur_0758 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002464148.1 PFAM: Rhomboid family protein; KEGG: cau:Caur_0757 rhomboid family protein YP_002464149.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: cau:Caur_0756 cell division protein FtsW YP_002464150.1 KEGG: cau:Caur_0755 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_002464151.1 KEGG: cau:Caur_0754 hypothetical protein YP_002464152.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cau:Caur_0753 UDP-N-acetylmuramate--alanine ligase YP_002464153.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_002464154.1 KEGG: cau:Caur_0751 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; D-alanine--D-alanine ligase domain protein YP_002464155.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: cau:Caur_0750 polypeptide-transport-associated domain-containing protein YP_002464156.1 PFAM: cell division protein FtsA; KEGG: cau:Caur_0749 cell division protein FtsA YP_002464157.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: cau:Caur_0748 cell division protein FtsZ YP_002464158.1 KEGG: cau:Caur_0747 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia YP_002464159.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: cau:Caur_0746 SH3 type 3 domain-containing protein YP_002464160.1 PFAM: Forkhead-associated protein; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_0745 protein kinase YP_002464161.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: cau:Caur_0744 phosphoribosylformylglycinamidine synthase I YP_002464162.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: cau:Caur_0743 prolipoprotein diacylglyceryl transferase YP_002464163.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0742 glycosyl transferase group 1 YP_002464164.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_0741 GCN5-related N-acetyltransferase YP_002464165.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_0740 methyltransferase type 11 YP_002464166.1 KEGG: cau:Caur_0739 hypothetical protein YP_002464167.1 PFAM: selenium-binding protein; KEGG: cau:Caur_0737 selenium-binding protein YP_002464168.1 KEGG: cau:Caur_0738 hypothetical protein YP_002464169.1 KEGG: cau:Caur_0736 hypothetical protein YP_002464170.1 KEGG: cau:Caur_0735 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_002464171.1 PFAM: HhH-GPD family protein; KEGG: cau:Caur_0734 HhH-GPD family protein YP_002464172.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: cau:Caur_0733 chromate transporter YP_002464173.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: cau:Caur_0732 low molecular weight phosphotyrosine protein phosphatase YP_002464174.1 PFAM: Peptidase M23; KEGG: cau:Caur_0731 peptidase M23B YP_002464175.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cau:Caur_0730 ErfK/YbiS/YcfS/YnhG family protein YP_002464177.1 PFAM: histidine triad (HIT) protein; KEGG: cau:Caur_0728 histidine triad (HIT) protein YP_002464178.1 PFAM: response regulator receiver; KEGG: cau:Caur_0727 response regulator receiver YP_002464179.1 PFAM: thioesterase superfamily protein; KEGG: cau:Caur_0726 thioesterase superfamily protein YP_002464180.1 KEGG: cau:Caur_0777 response regulator receiver/SARP domain-containing protein YP_002464181.1 KEGG: cau:Caur_0778 helicase YP_002464182.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_0779 alpha/beta hydrolase fold-containing protein YP_002464183.1 KEGG: cau:Caur_1781 hypothetical protein YP_002464184.1 PFAM: small multidrug resistance protein; KEGG: cau:Caur_1780 small multidrug resistance protein YP_002464185.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cau:Caur_1779 regulatory protein LysR YP_002464186.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rca:Rcas_0566 NADH dehydrogenase (quinone) YP_002464188.1 KEGG: rca:Rcas_0567 hypothetical protein YP_002464190.1 KEGG: cau:Caur_0798 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_002464191.1 PFAM: regulatory protein GntR HTH; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: cau:Caur_0799 regulatory protein DeoR YP_002464192.1 TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: cau:Caur_0801 phosphoenolpyruvate-protein phosphotransferase YP_002464193.1 KEGG: cau:Caur_0802 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_002464194.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS fructose-specific IIB subunit; KEGG: cau:Caur_0803 PTS system, fructose subfamily, IIC subunit YP_002464195.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: cau:Caur_1726 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_002464196.1 KEGG: cau:Caur_1725 putative lipase YP_002464197.1 KEGG: cau:Caur_1724 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_002464198.1 KEGG: cau:Caur_1723 hypothetical protein YP_002464199.1 KEGG: cau:Caur_1722 hypothetical protein YP_002464200.1 PFAM: inner-membrane translocator; KEGG: gtn:GTNG_3171 ribose ABC transporter (permease) YP_002464201.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dth:DICTH_1559 ribose transport ATP-binding protein RbsA YP_002464202.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: drm:Dred_2522 periplasmic binding protein/LacI transcriptional regulator YP_002464203.1 PFAM: inner-membrane translocator; KEGG: tte:TTE0205 ribose/xylose/arabinose/galactoside ABC-type transporter permease YP_002464204.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source YP_002464205.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: cau:Caur_1720 ribokinase YP_002464206.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_4199 transcriptional regulator, LacI family YP_002464207.1 PFAM: cyclic nucleotide-binding; KEGG: cau:Caur_1719 cyclic nucleotide-binding YP_002464208.1 PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: cau:Caur_2203 hypothetical protein YP_002464209.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: cau:Caur_2204 2-alkenal reductase YP_002464210.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_2205 NUDIX hydrolase YP_002464211.1 PFAM: aminotransferase class-III; KEGG: cau:Caur_2206 aminotransferase class-III YP_002464212.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002464213.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002464214.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_2209 alpha/beta hydrolase fold-containing protein YP_002464215.1 PFAM: Integral membrane protein TerC; KEGG: cau:Caur_2210 integral membrane protein TerC YP_002464216.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: cau:Caur_2211 CaCA family Na(+)/Ca(+) antiporter YP_002464217.1 KEGG: cau:Caur_2212 blue (type 1) copper domain protein YP_002464218.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: cau:Caur_2213 NADH dehydrogenase (quinone) YP_002464219.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: cau:Caur_2214 Na+/H+ antiporter MnhB subunit-related protein YP_002464220.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: cau:Caur_2215 NADH-ubiquinone oxidoreductase chain 4L YP_002464221.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: cau:Caur_2216 NADH dehydrogenase (quinone) YP_002464222.1 PFAM: cation antiporter; KEGG: cau:Caur_2217 cation antiporter YP_002464223.1 PFAM: multiple resistance and pH regulation protein F; KEGG: cau:Caur_2218 multiple resistance and pH regulation protein F YP_002464224.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: cau:Caur_2219 monovalent cation/proton antiporter, MnhG/PhaG subunit YP_002464225.1 KEGG: cau:Caur_2224 hypothetical protein YP_002464226.1 KEGG: mta:Moth_1929 hypothetical protein YP_002464227.1 PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_2225 stage II sporulation E family protein YP_002464228.1 PFAM: O-methyltransferase family 3; KEGG: cau:Caur_2226 O-methyltransferase family protein YP_002464229.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: cau:Caur_2227 response regulator receiver YP_002464230.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: cau:Caur_2228 chorismate mutase YP_002464231.1 KEGG: cau:Caur_2229 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_002464232.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002464233.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: cau:Caur_2231 SNO glutamine amidotransferase YP_002464234.1 KEGG: cau:Caur_2232 hypothetical protein YP_002464235.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: AAA ATPase; KEGG: cau:Caur_2233 single-stranded nucleic acid binding R3H domain-containing protein YP_002464236.1 PFAM: thymidylate kinase; KEGG: cau:Caur_2234 dTMP kinase YP_002464237.1 PFAM: protein of unknown function DUF970; KEGG: cau:Caur_2235 hypothetical protein YP_002464238.1 KEGG: cau:Caur_2236 hypothetical protein YP_002464239.1 PFAM: peptidase S58 DmpA; KEGG: cau:Caur_2237 peptidase S58 DmpA YP_002464240.1 PFAM: extracellular solute-binding protein family 5; KEGG: cau:Caur_2238 extracellular solute-binding protein YP_002464241.1 PFAM: Mur ligase middle domain protein; domain of unknown function DUF1727; KEGG: cau:Caur_2239 hypothetical protein YP_002464242.1 KEGG: cau:Caur_2240 hypothetical protein YP_002464243.1 KEGG: cau:Caur_2241 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein YP_002464244.1 PFAM: LmbE family protein; KEGG: cau:Caur_2243 LmbE family protein YP_002464245.1 PFAM: metallophosphoesterase; KEGG: cau:Caur_2244 metallophosphoesterase YP_002464246.1 KEGG: rca:Rcas_0220 hypothetical protein YP_002464247.1 PFAM: SMC domain protein; KEGG: cau:Caur_2245 SMC domain-containing protein YP_002464248.1 KEGG: cau:Caur_2246 hypothetical protein YP_002464249.1 PFAM: Integral membrane protein TerC; KEGG: cau:Caur_2247 integral membrane protein TerC YP_002464250.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cau:Caur_2248 LysR substrate-binding YP_002464251.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_2249 amine oxidase (flavin-containing) YP_002464252.1 KEGG: cau:Caur_2250 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_002464253.1 SMART: adenylyl cyclase class-3/4/guanylyl cyclase; AAA ATPase; KEGG: cau:Caur_2251 tetratricopeptide TPR_4 YP_002464254.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: cau:Caur_3520 adenylyl cyclase class-3/4/guanylyl cyclase YP_002464255.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_2256 glycosyl transferase group 1 YP_002464256.1 PFAM: protein of unknown function DUF970; KEGG: cau:Caur_2257 hypothetical protein YP_002464257.1 KEGG: cau:Caur_2258 phosphoribosyltransferase YP_002464258.1 PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_2259 transcriptional activator domain-containing protein YP_002464259.1 PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_1670 protein kinase YP_002464260.1 KEGG: cau:Caur_2260 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_002464261.1 KEGG: cau:Caur_2261 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_002464262.1 PFAM: cytochrome c oxidase subunit I; KEGG: cau:Caur_2426 cytochrome-c oxidase YP_002464263.1 PFAM: blue (type 1) copper domain protein; cytochrome c oxidase subunit II; KEGG: cau:Caur_2425 cytochrome c oxidase subunit II YP_002464264.1 KEGG: cau:Caur_2424 hypothetical protein YP_002464265.1 PFAM: electron transport protein SCO1/SenC; KEGG: cau:Caur_2423 electron transport protein SCO1/SenC YP_002464266.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_2422 phytoene desaturase YP_002464267.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: cau:Caur_2421 integral membrane protein MviN YP_002464268.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002464269.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: cau:Caur_2419 DNA polymerase III, delta subunit YP_002464270.1 KEGG: cau:Caur_2418 hypothetical protein YP_002464271.1 PFAM: peptidase domain protein; KEGG: cau:Caur_2417 peptidase domain-containing protein YP_002464272.1 KEGG: cau:Caur_2416 hypothetical protein YP_002464274.1 KEGG: cau:Caur_2415 hypothetical protein YP_002464275.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_002464276.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_2413 TPR repeat-containing protein YP_002464277.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cau:Caur_2412 ATPase central domain-containing protein YP_002464278.1 PFAM: type II secretion system protein E; KEGG: cau:Caur_2411 type II secretion system protein E YP_002464279.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_2410 phytoene desaturase YP_002464280.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_2409 short-chain dehydrogenase/reductase SDR YP_002464281.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_2408 short-chain dehydrogenase/reductase SDR YP_002464282.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cau:Caur_2407 malonyl CoA-acyl carrier protein transacylase YP_002464283.1 KEGG: cau:Caur_2406 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_002464284.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: cau:Caur_2405 ribosomal protein L32 YP_002464285.1 PFAM: protein of unknown function DUF177; KEGG: cau:Caur_2404 hypothetical protein YP_002464286.1 KEGG: cau:Caur_2403 hypothetical protein YP_002464287.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002464288.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: cau:Caur_2401 methyltransferase YP_002464289.1 PFAM: ribosomal protein S9; KEGG: cau:Caur_2400 ribosomal protein S9 YP_002464290.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002464291.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_002464292.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002464293.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002464294.1 PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: cau:Caur_2395 ribosomal protein S4 YP_002464295.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002464296.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002464297.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_002464298.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_002464299.1 PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: cau:Caur_2390 adenylate kinase YP_002464300.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: cau:Caur_2389 preprotein translocase, SecY subunit YP_002464301.1 late assembly protein YP_002464302.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002464303.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_002464304.1 binds 5S rRNA along with protein L5 and L25 YP_002464305.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002464306.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002464308.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_002464309.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002464310.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002464311.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_002464312.1 one of the stabilizing components for the large ribosomal subunit YP_002464313.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002464314.1 KEGG: cau:Caur_2375 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein YP_002464315.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002464316.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002464317.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002464318.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_002464319.1 PFAM: ribosomal protein L4/L1e; KEGG: cau:Caur_2370 ribosomal protein L4/L1e YP_002464320.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002464321.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002464322.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002464323.1 KEGG: cau:Caur_2366 putative SAM-dependent methyltransferase YP_002464324.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002464325.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002464326.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002464327.1 KEGG: cau:Caur_2361 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_002464328.1 PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: min:Minf_1900 transposon IS605 OrfB YP_002464329.1 PFAM: ATP-binding region ATPase domain protein; KEGG: cau:Caur_2359 ATPase domain-containing protein YP_002464330.1 KEGG: cau:Caur_2358 ATPase domain-containing protein YP_002464331.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cau:Caur_2357 anti-anti-sigma factor YP_002464332.1 PFAM: PfkB domain protein; KEGG: cau:Caur_2356 ribokinase-like domain-containing protein YP_002464333.1 PFAM: aminotransferase class I and II; KEGG: cau:Caur_2355 aminotransferase class I and II YP_002464334.1 KEGG: cau:Caur_2353 hypothetical protein YP_002464335.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_2352 carotene 7,8-desaturase YP_002464336.1 PFAM: WD-40 repeat protein; SMART: serine/threonine protein kinase; KEGG: cau:Caur_2351 WD-40 repeat-containing protein YP_002464337.1 PFAM: glycosyl transferase family 28; KEGG: cau:Caur_2350 glycosyl transferase family protein YP_002464338.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: cau:Caur_2349 Rieske (2Fe-2S) domain-containing protein YP_002464339.1 PFAM: oxidoreductase molybdopterin binding; KEGG: cau:Caur_2348 oxidoreductase molybdopterin binding YP_002464340.1 PFAM: Endonuclease V; KEGG: cau:Caur_2347 deoxyribonuclease V YP_002464341.1 KEGG: cau:Caur_2346 hypothetical protein YP_002464342.1 PFAM: ROK family protein; KEGG: cau:Caur_2345 ROK family protein YP_002464343.1 KEGG: cau:Caur_2344 hypothetical protein YP_002464344.1 KEGG: cau:Caur_2343 hypothetical protein YP_002464345.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: cau:Caur_2342 heat repeat-containing PBS lyase YP_002464346.1 PFAM: LmbE family protein; KEGG: cau:Caur_2341 LmbE family protein YP_002464347.1 PFAM: Methicillin resistance protein; KEGG: cau:Caur_2340 methicillin resistance protein YP_002464348.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cau:Caur_2339 UDP-N-acetylmuramyl-tripeptide synthetase YP_002464349.1 PFAM: dihydroorotate dehydrogenase; KEGG: cau:Caur_2338 dihydroorotate dehydrogenase YP_002464350.1 KEGG: cau:Caur_2335 hypothetical protein YP_002464351.1 KEGG: cau:Caur_2334 hypothetical protein YP_002464352.1 PFAM: extracellular solute-binding protein family 5; KEGG: cau:Caur_2333 extracellular solute-binding protein YP_002464353.1 TIGRFAM: preprotein translocase, SecG subunit; KEGG: cau:Caur_2332 preprotein translocase subunit SecG YP_002464354.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_002464355.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: cau:Caur_2330 tripartite ATP-independent periplasmic transporter DctQ YP_002464356.1 TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: cau:Caur_2329 TRAP dicarboxylate transporter DctM subunit YP_002464357.1 PFAM: TRAP dicarboxylate transporter DctM subunit; KEGG: cau:Caur_2328 TRAP dicarboxylate transporter-DctP subunit YP_002464358.1 PFAM: Auxin Efflux Carrier; KEGG: cau:Caur_2327 auxin efflux carrier YP_002464359.1 PFAM: response regulator receiver; KEGG: cau:Caur_2326 response regulator receiver YP_002464361.1 TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: cau:Caur_2325 polynucleotide adenylyltransferase region YP_002464362.1 PFAM: peptidase S45 penicillin amidase; KEGG: cau:Caur_2322 peptidase S45 penicillin amidase YP_002464363.1 PFAM: Polyprenyl synthetase; KEGG: cau:Caur_2321 polyprenyl synthetase YP_002464364.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: cau:Caur_2320 aspartyl-tRNA synthetase YP_002464365.1 PFAM: response regulator receiver; Roadblock/LC7 family protein; KEGG: cau:Caur_2319 response regulator receiver YP_002464366.1 PFAM: ribosomal protein L21; KEGG: cau:Caur_2318 ribosomal protein L21 YP_002464367.1 involved in the peptidyltransferase reaction during translation YP_002464368.1 PFAM: ribosomal protein L31; KEGG: cau:Caur_2316 ribosomal protein L31 YP_002464369.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: cau:Caur_2315 helix-turn-helix type 11 domain-containing protein YP_002464371.1 KEGG: cau:Caur_2314 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_002464372.1 KEGG: cau:Caur_2313 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_002464373.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_2312 dTDP-glucose 4,6-dehydratase YP_002464374.1 KEGG: cau:Caur_2311 hypothetical protein YP_002464375.1 PFAM: conserved hypothetical protein; KEGG: cau:Caur_2310 hypothetical protein YP_002464376.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_002464377.1 PFAM: PspA/IM30 family protein; KEGG: cau:Caur_2308 PspA/IM30 family protein YP_002464378.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_002464379.1 KEGG: cau:Caur_2306 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_002464380.1 KEGG: cau:Caur_2305 hypothetical protein YP_002464381.1 KEGG: cau:Caur_2304 hypothetical protein YP_002464382.1 KEGG: cau:Caur_2303 hypothetical protein YP_002464383.1 PFAM: isochorismatase hydrolase; KEGG: rca:Rcas_3491 N-carbamoylsarcosine amidase YP_002464384.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rca:Rcas_3492 5-oxoprolinase (ATP-hydrolyzing) YP_002464385.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rca:Rcas_3493 5-oxoprolinase (ATP-hydrolyzing) YP_002464386.1 PFAM: pyruvate carboxyltransferase; KEGG: rca:Rcas_3494 pyruvate carboxyltransferase YP_002464387.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rca:Rcas_3495 formyl-CoA transferase YP_002464388.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rca:Rcas_3496 GntR family transcriptional regulator YP_002464389.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_2268 glycosyl transferase family protein YP_002464391.1 TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: cau:Caur_0438 GTP-binding protein HflX YP_002464392.1 PFAM: protein of unknown function DUF990; KEGG: cau:Caur_0437 hypothetical protein YP_002464393.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cau:Caur_0436 FolC bifunctional protein YP_002464394.1 PFAM: Peptidase M23; KEGG: cau:Caur_0650 fibronectin type III domain-containing protein YP_002464395.1 KEGG: cau:Caur_0435 hypothetical protein YP_002464396.1 KEGG: cau:Caur_0434 hypothetical protein YP_002464403.1 KEGG: cau:Caur_0433 luciferase family protein YP_002464404.1 PFAM: aminotransferase class I and II; KEGG: cau:Caur_0432 aminotransferase class I and II YP_002464405.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: cau:Caur_0431 sortase family protein YP_002464406.1 KEGG: cau:Caur_0430 hypothetical protein YP_002464407.1 PFAM: membrane protein of unknown function; KEGG: cau:Caur_0429 membrane protein of unknown function YP_002464408.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_0428 methyltransferase type 11 YP_002464409.1 PFAM: protein of unknown function DUF77; KEGG: cau:Caur_0427 hypothetical protein YP_002464410.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0426 binding-protein-dependent transport systems inner membrane component YP_002464411.1 PFAM: NMT1/THI5 like domain protein; KEGG: cau:Caur_0425 NMT1/THI5-like domain-containing protein YP_002464412.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0424 ABC transporter related YP_002464413.1 KEGG: cau:Caur_0423 hypothetical protein YP_002464414.1 PFAM: FAD dependent oxidoreductase; KEGG: cau:Caur_0422 FAD dependent oxidoreductase YP_002464415.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: cau:Caur_0421 recombination factor protein RarA YP_002464416.1 KEGG: cau:Caur_0420 magnesium chelatase ATPase subunit D; TIGRFAM: magnesium chelatase ATPase subunit D; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_002464417.1 KEGG: cau:Caur_0419 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; SMART: AAA ATPase YP_002464419.1 PFAM: protein of unknown function DUF169; KEGG: cau:Caur_0418 hypothetical protein YP_002464421.1 KEGG: cau:Caur_0417 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein YP_002464422.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_0416 alcohol dehydrogenase YP_002464423.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: cau:Caur_0415 2-vinyl bacteriochlorophyllide hydratase YP_002464424.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_0414 methyltransferase type 11 YP_002464425.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: cau:Caur_0413 PucC protein YP_002464426.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; Thrombospondin type 3 repeat; Cna B domain protein; KEGG: cau:Caur_0412 hypothetical protein YP_002464427.1 KEGG: cau:Caur_0411 hypothetical protein YP_002464428.1 KEGG: cau:Caur_0410 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002464429.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cau:Caur_0409 dTDP-4-dehydrorhamnose reductase YP_002464430.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_0408 glycosyl transferase family protein YP_002464431.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_0407 glycosyl transferase family protein YP_002464432.1 PFAM: protein of unknown function UPF0044; KEGG: cau:Caur_0406 hypothetical protein YP_002464433.1 KEGG: cau:Caur_0405 hypothetical protein YP_002464434.1 KEGG: cau:Caur_0404 hypothetical protein YP_002464435.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cau:Caur_0403 flavin reductase domain-containing protein YP_002464436.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE domain protein; PAS fold-4 domain protein; KEGG: cau:Caur_0402 histidine kinase YP_002464437.1 KEGG: cau:Caur_0401 hypothetical protein YP_002464438.1 KEGG: cau:Caur_0400 putative transmembrane anti-sigma factor YP_002464439.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_0399 sigma-70 family RNA polymerase sigma factor YP_002464440.1 PFAM: protein of unknown function DUF37; KEGG: cau:Caur_0398 hypothetical protein YP_002464441.1 KEGG: cau:Caur_0397 4-vinyl reductase 4VR YP_002464442.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: cau:Caur_0396 molybdenum cofactor synthesis domain-containing protein YP_002464443.1 PFAM: protein of unknown function DUF59; KEGG: cau:Caur_0395 hypothetical protein YP_002464444.1 PFAM: amidohydrolase 2; KEGG: cau:Caur_0394 amidohydrolase 2 YP_002464445.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_002464446.1 TIGRFAM: conserved repeat domain protein; SMART: Parallel beta-helix repeat; KEGG: cau:Caur_0392 hypothetical protein YP_002464447.1 KEGG: cau:Caur_0391 hypothetical protein YP_002464448.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002464449.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: rca:Rcas_2076 IS605 family transposase OrfB YP_002464450.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cau:Caur_0389 xylose isomerase domain-containing protein YP_002464451.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cau:Caur_0388 hypothetical protein YP_002464452.1 KEGG: cau:Caur_0387 hypothetical protein YP_002464453.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002464454.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cau:Caur_0385 tRNA/rRNA methyltransferase (SpoU) YP_002464455.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002464456.1 KEGG: cau:Caur_0383 hypothetical protein YP_002464457.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: cau:Caur_0382 translation initiation factor IF-3 YP_002464459.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP YP_002464460.1 KEGG: cau:Caur_0374 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_002464461.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: cau:Caur_0373 phosphomethylpyrimidine kinase YP_002464462.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_0377 short-chain dehydrogenase/reductase SDR YP_002464463.1 KEGG: cau:Caur_0537 LamG domain-containing protein YP_002464464.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_0536 hypothetical protein YP_002464465.1 PFAM: conserved hypothetical protein; KEGG: cau:Caur_0535 hypothetical protein YP_002464466.1 KEGG: cau:Caur_0534 hypothetical protein YP_002464467.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cau:Caur_0533 flavin reductase domain-containing protein YP_002464468.1 PFAM: thioesterase superfamily protein; KEGG: cau:Caur_0532 thioesterase superfamily protein YP_002464469.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_0531 inner-membrane translocator YP_002464470.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0530 ABC transporter related YP_002464471.1 KEGG: cau:Caur_0504 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase YP_002464472.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_002464473.1 TIGRFAM: ribosomal protein S21; KEGG: cau:Caur_0492 ribosomal protein S21 YP_002464474.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_0493 alpha amylase catalytic region YP_002464475.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0494 binding-protein-dependent transport systems inner membrane component YP_002464476.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0495 binding-protein-dependent transport systems inner membrane component YP_002464477.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_0496 extracellular solute-binding protein YP_002464478.1 PFAM: regulatory protein MarR; KEGG: cau:Caur_0497 regulatory protein MarR YP_002464479.1 KEGG: cau:Caur_0498 transcriptional regulator, CdaR YP_002464480.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: cau:Caur_0499 transcription attenuator LytR YP_002464481.1 KEGG: rca:Rcas_3651 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_002464482.1 PFAM: transposase IS200-family protein; KEGG: dge:Dgeo_2273 transposase IS200-like protein YP_002464483.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_002464484.1 KEGG: cau:Caur_0501 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_002464485.1 KEGG: cau:Caur_0502 glucose-6-P dehydrogenase subunit-like protein YP_002464486.1 KEGG: cau:Caur_0503 hypothetical protein YP_002464487.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: cau:Caur_0529 preprotein translocase, SecA subunit YP_002464488.1 KEGG: cau:Caur_0528 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_002464489.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_0527 ATPase domain-containing protein YP_002464490.1 KEGG: cau:Caur_0526 hypothetical protein YP_002464491.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: cau:Caur_0525 ATPase YP_002464492.1 KEGG: cau:Caur_0524 hypothetical protein YP_002464493.1 KEGG: cau:Caur_0523 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_002464494.1 PFAM: conserved hypothetical protein; KEGG: cau:Caur_0522 hypothetical protein YP_002464495.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002464496.1 KEGG: cau:Caur_0520 hypothetical protein YP_002464497.1 KEGG: cau:Caur_0519 hypothetical protein YP_002464498.1 KEGG: cau:Caur_0518 hypothetical protein YP_002464499.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_0517 alpha amylase catalytic region YP_002464500.1 KEGG: cau:Caur_0516 hypothetical protein YP_002464501.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_0515 alpha/beta hydrolase fold-containing protein YP_002464502.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: cau:Caur_0514 SAF domain-containing protein YP_002464503.1 PFAM: response regulator receiver; KEGG: rca:Rcas_1683 response regulator receiver protein YP_002464504.1 PFAM: type II secretion system protein E; KEGG: cau:Caur_0512 type II secretion system protein E YP_002464505.1 PFAM: type II secretion system protein; KEGG: cau:Caur_0511 type II secretion system protein YP_002464506.1 PFAM: type II secretion system protein; KEGG: cau:Caur_0510 type II secretion system protein YP_002464507.1 PFAM: protein of unknown function DUF192; KEGG: cau:Caur_0509 hypothetical protein YP_002464508.1 KEGG: cau:Caur_0508 hypothetical protein YP_002464509.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: cau:Caur_0507 hypothetical protein YP_002464510.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: cau:Caur_0506 aspartate/glutamate/uridylate kinase YP_002464511.1 PFAM: UbiA prenyltransferase; KEGG: cau:Caur_0505 UbiA prenyltransferase YP_002464512.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: cau:Caur_0490 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_002464513.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: cau:Caur_0488 branched-chain amino acid aminotransferase YP_002464514.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0487 ABC transporter related YP_002464516.1 PFAM: protein of unknown function RIO1; tyrosine protein kinase; PASTA domain containing protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_0486 protein kinase YP_002464517.1 KEGG: cau:Caur_0485 exonuclease-like protein YP_002464518.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: cau:Caur_0484 inosine/uridine-preferring nucleoside hydrolase YP_002464519.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: cau:Caur_0483 integral membrane protein MviN YP_002464520.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: cau:Caur_0482 transcription attenuator LytR YP_002464521.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: cau:Caur_0481 biotin--acetyl-CoA-carboxylase ligase YP_002464523.1 KEGG: cau:Caur_0480 hypothetical protein YP_002464524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0479 ABC transporter related YP_002464525.1 KEGG: cau:Caur_0478 hypothetical protein YP_002464528.1 KEGG: cau:Caur_0477 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein YP_002464529.1 KEGG: cau:Caur_0476 hypothetical protein YP_002464530.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: cau:Caur_0475 holo-acyl-carrier-protein synthase YP_002464531.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: cau:Caur_0474 carbohydrate kinase, YjeF related protein YP_002464532.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; KEGG: hau:Haur_4182 pyrimidine-nucleoside phosphorylase YP_002464533.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: cau:Caur_0472 FmdB family regulatory protein YP_002464534.1 KEGG: cau:Caur_0471 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase YP_002464535.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_002464536.1 KEGG: cau:Caur_0469 hypothetical protein YP_002464537.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: cau:Caur_0468 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_002464538.1 PFAM: Disulphide bond formation protein DsbB; KEGG: cau:Caur_0467 disulphide bond formation protein DsbB YP_002464539.1 KEGG: cau:Caur_0466 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002464540.1 PFAM: VanW family protein; KEGG: cau:Caur_0464 VanW family protein YP_002464541.1 KEGG: cau:Caur_0463 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_002464542.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: cau:Caur_0462 peptidase C26 YP_002464543.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: cau:Caur_0461 peptidase C26 YP_002464544.1 KEGG: cau:Caur_0460 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002464545.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_0459 stage II sporulation E family protein YP_002464546.1 PFAM: ATP-binding region ATPase domain protein; KEGG: cau:Caur_0458 ATPase domain-containing protein YP_002464547.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_002464548.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: cau:Caur_0448 PilT domain-containing protein YP_002464549.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002464550.1 PFAM: O-antigen polymerase; KEGG: cau:Caur_2461 O-antigen polymerase YP_002464551.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cau:Caur_0053 methyltransferase type 11 YP_002464553.1 KEGG: cau:Caur_2440 hypothetical protein YP_002464554.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2439 ABC transporter related YP_002464555.1 KEGG: rxy:Rxyl_0038 hypothetical protein YP_002464558.1 KEGG: cau:Caur_2438 hypothetical protein YP_002464559.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_2437 response regulator receiver YP_002464560.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_2436 ATPase domain-containing protein YP_002464561.1 PFAM: regulatory protein MarR; KEGG: rrs:RoseRS_1206 MarR family transcriptional regulator YP_002464562.1 PFAM: glutaredoxin; KEGG: cau:Caur_1822 glutaredoxin-like protein YP_002464563.1 KEGG: rrs:RoseRS_1207 hypothetical protein YP_002464565.1 PFAM: DsrE family protein; KEGG: afw:Anae109_3261 DsrE family protein YP_002464566.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cpo:COPRO5265_0003 SAM-dependent methyltransferase, UbiE/COQ5 family YP_002464567.1 KEGG: gme:Gmet_2089 hypothetical protein YP_002464568.1 SMART: low-density lipoprotein receptor YWTD repeat; PA14 domain protein; KEGG: rca:Rcas_3703 dystroglycan-type cadherin domain-containing protein YP_002464570.1 KEGG: rca:Rcas_3699 hypothetical protein YP_002464571.1 KEGG: rrs:RoseRS_4272 hypothetical protein YP_002464572.1 KEGG: cau:Caur_0300 hypothetical protein YP_002464573.1 KEGG: cau:Caur_0299 hypothetical protein YP_002464575.1 PFAM: protein of unknown function DUF1568; KEGG: rca:Rcas_3702 hypothetical protein YP_002464576.1 PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: AAA ATPase; Tetratricopeptide domain protein; KEGG: rca:Rcas_3701 SARP family transcriptional regulator YP_002464580.1 KEGG: cph:Cpha266_0024 transposase YP_002464581.1 KEGG: cau:Caur_1815 hypothetical protein YP_002464582.1 KEGG: cau:Caur_1813 restriction modification system DNA specificity subunit YP_002464583.1 PFAM: protein of unknown function DUF86; KEGG: tth:TTC1284 nucleotidyltransferase YP_002464584.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_0274 DNA polymerase beta subunit YP_002464585.1 PFAM: N-6 DNA methylase; KEGG: cau:Caur_1810 N-6 DNA methylase YP_002464586.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cau:Caur_2434 response regulator receiver YP_002464587.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_2433 histidine kinase YP_002464588.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: cau:Caur_2431 iron dependent repressor YP_002464589.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: cau:Caur_2430 antibiotic biosynthesis monooxygenase YP_002464590.1 PFAM: transport system permease protein; KEGG: rca:Rcas_4371 transport system permease protein YP_002464591.1 PFAM: periplasmic binding protein; KEGG: cau:Caur_2428 periplasmic binding protein YP_002464592.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2427 ABC transporter related YP_002464593.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: cau:Caur_2290 regulatory protein DeoR YP_002464594.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2289 ABC transporter related YP_002464595.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_2288 monosaccharide-transporting ATPase YP_002464596.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_2287 monosaccharide-transporting ATPase YP_002464597.1 KEGG: cau:Caur_2286 ABC-type sugar transport system periplasmic component-like protein YP_002464598.1 PFAM: protein of unknown function DUF718; KEGG: cau:Caur_2285 hypothetical protein YP_002464599.1 catalyzes the formation of L-rhamnulose from L-rhamnose YP_002464600.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cau:Caur_2283 short chain dehydrogenase YP_002464601.1 PFAM: carbohydrate kinase FGGY; KEGG: cau:Caur_2282 carbohydrate kinase FGGY YP_002464602.1 PFAM: DNA photolyase FAD-binding; deoxyribodipyrimidine photolyase-related protein; KEGG: cau:Caur_0440 deoxyribodipyrimidine photolyase-related protein YP_002464603.1 KEGG: NEMVEDRAFT_v1g73923; predicted protein YP_002464604.1 KEGG: cau:Caur_0441 hypothetical protein YP_002464605.1 KEGG: mca:MCA0837 hypothetical protein YP_002464606.1 KEGG: rrs:RoseRS_0299 hypothetical protein YP_002464607.1 PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_0298 helicase domain-containing protein YP_002464608.1 PFAM: glycoside hydrolase family 31; KEGG: cau:Caur_1897 alpha-glucosidase YP_002464609.1 PFAM: Thioredoxin domain; KEGG: cau:Caur_2541 thioredoxin YP_002464610.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: det:DET1532 dinitrogenase iron-molybdenum cofactor family protein YP_002464611.1 KEGG: rca:Rcas_2874 polymorphic outer membrane protein YP_002464612.1 TIGRFAM: polymorphic outer membrane protein; KEGG: cau:Caur_0298 polymorphic outer membrane protein YP_002464613.1 KEGG: rca:Rcas_1408 hypothetical protein YP_002464614.1 PFAM: Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: cau:Caur_1792 proline--tRNA ligase YP_002464615.1 PFAM: protein of unknown function DUF72; KEGG: cau:Caur_1793 hypothetical protein YP_002464616.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: cau:Caur_1794 delta-1-pyrroline-5-carboxylate dehydrogenase YP_002464617.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_4176 methyltransferase type 11 YP_002464618.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: vei:Veis_3519 DNA methylase N-4/N-6 domain protein YP_002464619.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: mar:MAE_07890 heat repeat-containing protein YP_002464620.1 KEGG: min:Minf_1805 type II restriction enzyme, SfiI family YP_002464621.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_4184 DNA methylase N-4/N-6 domain-containing protein YP_002464622.1 KEGG: rca:Rcas_2235 hypothetical protein YP_002464623.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rca:Rcas_2231 DNA methylase N-4/N-6 domain-containing protein YP_002464624.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rca:Rcas_2232 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_002464625.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_1072 AMP-dependent synthetase and ligase YP_002464626.1 KEGG: cau:Caur_1071 hypothetical protein YP_002464627.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources YP_002464628.1 KEGG: hau:Haur_4208 hypothetical protein YP_002464629.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: cau:Caur_1617 glutamine amidotransferase YP_002464630.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_002464631.1 KEGG: cau:Caur_1615 hypothetical protein YP_002464632.1 KEGG: cau:Caur_3138 hypothetical protein YP_002464633.1 KEGG: rca:Rcas_2375 hypothetical protein YP_002464634.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rca:Rcas_2376 AraC family transcriptional regulator YP_002464635.1 PFAM: amino acid-binding ACT domain protein; malic protein domain protein; malic protein NAD-binding; KEGG: cau:Caur_1614 malate dehydrogenase YP_002464636.1 KEGG: cau:Caur_1613 hypothetical protein YP_002464637.1 KEGG: cau:Caur_1612 hypothetical protein YP_002464638.1 PFAM: peptidase M48 Ste24p; KEGG: cau:Caur_1611 peptidase M48 Ste24p YP_002464639.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: cau:Caur_1609 response regulator receiver YP_002464640.1 KEGG: cau:Caur_1892 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3 YP_002464641.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_002464642.1 PFAM: phosphoribosyltransferase; KEGG: cau:Caur_1890 phosphoribosyltransferase YP_002464643.1 PFAM: Glycosyltransferase 28 domain; Monogalactosyldiacylglycerol synthase; KEGG: cau:Caur_0652 monogalactosyldiacylglycerol synthase YP_002464644.1 PFAM: glycosyl transferase group 1; Glycosyltransferase 28 domain; Monogalactosyldiacylglycerol synthase; KEGG: cau:Caur_0651 monogalactosyldiacylglycerol synthase YP_002464645.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: mxa:MXAN_3034 putative ADP-ribosylglycohydrolase YP_002464646.1 KEGG: NEMVEDRAFT_v1g222522; hypothetical protein YP_002464647.1 TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_0645 protoporphyrinogen oxidase YP_002464648.1 KEGG: cau:Caur_0644 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002464649.1 PFAM: glycosyl transferase group 1; KEGG: cau:Caur_0642 glycosyl transferase group 1 YP_002464650.1 KEGG: cau:Caur_0641 hypothetical protein YP_002464651.1 KEGG: cau:Caur_0640 hypothetical protein YP_002464652.1 KEGG: cau:Caur_0639 hypothetical protein YP_002464653.1 KEGG: cau:Caur_0638 hypothetical protein YP_002464654.1 KEGG: cau:Caur_0634 hypothetical protein YP_002464655.1 PFAM: Phosphoglycerate mutase; KEGG: cau:Caur_0633 phosphoglycerate mutase YP_002464656.1 PFAM: diacylglycerol kinase; KEGG: cau:Caur_0632 diacylglycerol kinase YP_002464657.1 PFAM: ABC-1 domain protein; KEGG: cau:Caur_0631 hypothetical protein YP_002464658.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: cau:Caur_0630 phosphoribosylglycinamide formyltransferase YP_002464659.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_002464660.1 PFAM: protein of unknown function DUF123; KEGG: cau:Caur_0628 hypothetical protein YP_002464661.1 KEGG: cau:Caur_0627 hypothetical protein YP_002464662.1 KEGG: cau:Caur_0626 hypothetical protein YP_002464663.1 KEGG: cau:Caur_0625 hypothetical protein YP_002464664.1 KEGG: cau:Caur_0624 transmembrane prediction YP_002464665.1 PFAM: Polysulphide reductase NrfD; KEGG: cau:Caur_0623 polysulphide reductase NrfD YP_002464666.1 KEGG: cau:Caur_0622 Fe-S-cluster-containing hydrogenase components 1-like protein YP_002464667.1 KEGG: cau:Caur_0621 hypothetical protein YP_002464668.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_002464669.1 PFAM: MOFRL domain protein; KEGG: cau:Caur_0619 hydroxypyruvate reductase YP_002464670.1 KEGG: cau:Caur_0617 GHMP kinase domain-containing protein YP_002464671.1 KEGG: cau:Caur_0616 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase YP_002464672.1 KEGG: cau:Caur_0615 hypothetical protein YP_002464673.1 KEGG: cau:Caur_0614 hypothetical protein YP_002464674.1 PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_0613 AMP-dependent synthetase and ligase YP_002464675.1 PFAM: glycosyl transferase family 4; KEGG: cau:Caur_0612 glycosyl transferase family protein YP_002464676.1 KEGG: cau:Caur_0611 TPR repeat-containing protein YP_002464677.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: cau:Caur_0610 DNA repair protein RecN YP_002464678.1 KEGG: cau:Caur_0596 hypothetical protein YP_002464679.1 PFAM: Saccharopine dehydrogenase; KEGG: cau:Caur_0593 saccharopine dehydrogenase YP_002464680.1 PFAM: Amidase; KEGG: cau:Caur_0592 amidase YP_002464681.1 KEGG: cau:Caur_0591 hypothetical protein YP_002464682.1 PFAM: class II aldolase/adducin family protein; KEGG: cau:Caur_0590 class II aldolase/adducin family protein YP_002464683.1 KEGG: cau:Caur_0589 hypothetical protein YP_002464684.1 KEGG: cau:Caur_0588 hypothetical protein YP_002464685.1 KEGG: cau:Caur_0587 hypothetical protein YP_002464686.1 KEGG: cau:Caur_0586 hypothetical protein YP_002464687.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cau:Caur_0585 L-carnitine dehydratase/bile acid-inducible protein F YP_002464688.1 KEGG: cau:Caur_0584 heat repeat-containing PBS lyase YP_002464689.1 PFAM: Aldehyde Dehydrogenase; KEGG: cau:Caur_0583 aldehyde dehydrogenase YP_002464690.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0582 ABC transporter related YP_002464691.1 PFAM: protein of unknown function DUF156; KEGG: cau:Caur_0580 hypothetical protein YP_002464692.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: cau:Caur_0579 heavy metal transport/detoxification protein YP_002464693.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: cau:Caur_0578 copper-translocating P-type ATPase YP_002464694.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cau:Caur_0577 metal dependent phophohydrolase YP_002464695.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: cau:Caur_0576 diaminopimelate decarboxylase YP_002464696.1 PFAM: ROK family protein; KEGG: cau:Caur_0575 ROK family protein YP_002464697.1 PFAM: Amidohydrolase 3; KEGG: rrs:RoseRS_2426 amidohydrolase 3 YP_002464699.1 PFAM: FAD dependent oxidoreductase; KEGG: cau:Caur_0564 FAD dependent oxidoreductase YP_002464700.1 KEGG: cau:Caur_0565 hypothetical protein YP_002464701.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: cau:Caur_0566 electron transport protein SCO1/SenC YP_002464702.1 PFAM: protein of unknown function DUF461; KEGG: cau:Caur_0567 hypothetical protein YP_002464703.1 KEGG: cau:Caur_0568 hypothetical protein YP_002464704.1 KEGG: cau:Caur_0570 GCN5-related N-acetyltransferase YP_002464705.1 KEGG: rca:Rcas_3627 hypothetical protein YP_002464706.1 PFAM: asparagine synthase; KEGG: nfa:nfa29020 hypothetical protein YP_002464707.1 KEGG: rca:Rcas_3020 hypothetical protein YP_002464708.1 KEGG: rca:Rcas_3019 hypothetical protein YP_002464709.1 KEGG: rca:Rcas_3018 hypothetical protein YP_002464710.1 KEGG: rrs:RoseRS_2040 hypothetical protein YP_002464711.1 KEGG: rca:Rcas_3017 hypothetical protein YP_002464712.1 PFAM: Domain of unknown function DUF1801; KEGG: cau:Caur_2584 hypothetical protein YP_002464713.1 PFAM: glycoside hydrolase family 9; cellulose-binding family II; type 3a cellulose-binding domain protein; KEGG: hau:Haur_0296 glycoside hydrolase family protein YP_002464714.1 PFAM: SirA family protein; KEGG: cau:Caur_0571 SirA family protein YP_002464715.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cau:Caur_0572 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002464716.1 catalyzes the formation of phenol and pyruvate from tyrosine YP_002464717.1 KEGG: eta:ETA_24160 hypothetical protein YP_002464718.1 PFAM: conserved hypothetical protein; KEGG: cau:Caur_2790 hypothetical protein YP_002464719.1 KEGG: cau:Caur_2789 hypothetical protein YP_002464720.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: cau:Caur_2788 hypothetical protein YP_002464721.1 TIGRFAM: CRISPR-associated protein, Csm1 family; KEGG: cau:Caur_0563 CRISPR-associated Csm1 family protein YP_002464722.1 TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: protein of unknown function DUF310; KEGG: cau:Caur_0562 CRISPR-associated Csm2 family protein YP_002464723.1 TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: cau:Caur_0561 CRISPR-associated RAMP Csm3 family protein YP_002464724.1 TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; KEGG: cau:Caur_0560 CRISPR-associated RAMP Csm4 family protein YP_002464725.1 TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; KEGG: cau:Caur_0559 CRISPR-associated RAMP Csm5 family protein YP_002464726.1 KEGG: cau:Caur_0558 hypothetical protein YP_002464727.1 KEGG: cau:Caur_0557 hypothetical protein YP_002464728.1 TIGRFAM: CRISPR-associated protein Cas6; PFAM: CRISPR-associated protein TM1814; KEGG: cau:Caur_0556 CRISPR-associated Cas family protein YP_002464729.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: cau:Caur_0555 CRISPR-associated Cas1 family protein YP_002464730.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: cau:Caur_0554 CRISPR-associated Cas2 family protein YP_002464731.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: cau:Caur_0551 phosphate transport system regulatory protein PhoU YP_002464732.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli YP_002464733.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate YP_002464734.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rxy:Rxyl_1714 2-hydroxy-3-oxopropionate reductase YP_002464735.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cau:Caur_3641 hydroxypyruvate isomerase YP_002464736.1 PFAM: deoxyhypusine synthase; KEGG: cau:Caur_0545 deoxyhypusine synthase YP_002464737.1 KEGG: cau:Caur_0542 membrane protein-like protein YP_002464738.1 PFAM: Na+/solute symporter; KEGG: cau:Caur_0541 Na+/solute symporter YP_002464739.1 KEGG: cau:Caur_0540 hypothetical protein YP_002464740.1 KEGG: cau:Caur_0539 helix-turn-helix type 11 domain-containing protein YP_002464741.1 PFAM: protein of unknown function DUF156; KEGG: cau:Caur_2540 hypothetical protein YP_002464742.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: cau:Caur_2541 thioredoxin YP_002464743.1 PFAM: beta-lactamase domain protein; KEGG: cau:Caur_2542 beta-lactamase domain-containing protein YP_002464744.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002464745.1 KEGG: cau:Caur_2544 hypothetical protein YP_002464746.1 KEGG: cau:Caur_2545 hypothetical protein YP_002464747.1 PFAM: Polyphosphate kinase; KEGG: cau:Caur_2546 polyphosphate kinase YP_002464748.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_2547 major facilitator transporter YP_002464749.1 KEGG: cau:Caur_2548 hypothetical protein YP_002464750.1 KEGG: cau:Caur_2549 glycosyl transferase family protein YP_002464751.1 KEGG: cau:Caur_2550 NHL repeat-containing protein; TIGRFAM: NHL repeat protein; PFAM: NHL repeat containing protein; SMART: low-density lipoprotein receptor YWTD repeat YP_002464752.1 KEGG: cau:Caur_2551 hypothetical protein YP_002464753.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: cau:Caur_2552 6-phosphogluconolactonase YP_002464754.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production YP_002464755.1 PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: cau:Caur_2555 coenzyme F420 hydrogenase/dehydrogenase beta subunit YP_002464756.1 light-independent reduction of protochlorophyllide to form chlorophyllide a YP_002464757.1 light-independent reduction of protochlorophyllide to form chlorophyllide a YP_002464758.1 KEGG: cau:Caur_2972 hypothetical protein YP_002464759.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_2973 extracellular solute-binding protein YP_002464760.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage YP_002464761.1 PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_4116 allergen V5/TPX-1 family protein YP_002464762.1 KEGG: rca:Rcas_2085 hypothetical protein YP_002464763.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: cau:Caur_2976 ATPase YP_002464765.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: rca:Rcas_2586 TrkA domain-containing protein YP_002464766.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rca:Rcas_2587 hypothetical protein YP_002464767.1 KEGG: rca:Rcas_2588 hypothetical protein YP_002464768.1 PFAM: protein of unknown function UPF0118; KEGG: rca:Rcas_2589 hypothetical protein YP_002464769.1 KEGG: rca:Rcas_2590 glucan 1,4-alpha-glucosidase; TIGRFAM: glucan 1,4-alpha-glucosidase; PFAM: glycoside hydrolase 15-related; Glucodextranase N YP_002464770.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rca:Rcas_2591 alcohol dehydrogenase YP_002464771.1 PFAM: major facilitator superfamily MFS_1; KEGG: rca:Rcas_2592 major facilitator transporter YP_002464773.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: rca:Rcas_2594 peptidase YP_002464774.1 PFAM: protein of unknown function DUF1003; KEGG: rca:Rcas_2595 membrane protein-like protein YP_002464775.1 PFAM: conserved hypothetical protein; KEGG: rca:Rcas_2596 hypothetical protein YP_002464776.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_2598 integral membrane sensor signal transduction histidine kinase YP_002464777.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rca:Rcas_2599 two component transcriptional regulator YP_002464778.1 KEGG: cau:Caur_2977 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002464779.1 KEGG: cau:Caur_2978 hypothetical protein YP_002464780.1 KEGG: cau:Caur_2979 hypothetical protein YP_002464781.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rrs:RoseRS_1585 phosphonate metabolism protein PhnM YP_002464782.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1586 ABC transporter related YP_002464783.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_2982 ABC transporter related YP_002464784.1 PFAM: phosphonate metabolism PhnJ; KEGG: rrs:RoseRS_1588 phosphonate metabolism PhnJ YP_002464785.1 PFAM: phosphonate metabolism; KEGG: rrs:RoseRS_1589 phosphonate metabolism YP_002464786.1 TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: cau:Caur_2985 phosphonate C-P lyase system protein PhnH YP_002464788.1 TIGRFAM: phosphonate C-P lyase system protein PhnG; KEGG: rrs:RoseRS_1591 hypothetical protein YP_002464789.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1592 phosphonate ABC transporter, inner membrane subunit YP_002464790.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1593 phosphonate ABC transporter, inner membrane subunit YP_002464791.1 KEGG: cau:Caur_2989 phosphonate ABC transporter, ATPase subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_002464792.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: cau:Caur_2990 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_002464793.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_2991 GCN5-related N-acetyltransferase YP_002464794.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cau:Caur_2992 quinone oxidoreductase YP_002464795.1 KEGG: cau:Caur_2993 hypothetical protein YP_002464796.1 KEGG: cau:Caur_2994 hypothetical protein YP_002464798.1 KEGG: cau:Caur_2995 hypothetical protein YP_002464799.1 KEGG: cau:Caur_2996 hypothetical protein YP_002464800.1 PFAM: TrkA-C domain protein; Chloride channel core; KEGG: mta:Moth_1588 Cl-channel, voltage gated YP_002464801.1 PFAM: Rhomboid family protein; KEGG: cau:Caur_2997 rhomboid family protein YP_002464802.1 PFAM: protein of unknown function DUF114; KEGG: cau:Caur_2998 hypothetical protein YP_002464803.1 KEGG: cau:Caur_3000 hypothetical protein YP_002464804.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cau:Caur_3001 phosphotransferase domain-containing protein YP_002464805.1 KEGG: cau:Caur_3002 hypothetical protein YP_002464806.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cau:Caur_3005 peptidase M20 YP_002464808.1 KEGG: cau:Caur_3006 hypothetical protein YP_002464809.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cau:Caur_3007 xanthine dehydrogenase YP_002464811.1 KEGG: rrs:RoseRS_4272 hypothetical protein YP_002464812.1 KEGG: shw:Sputw3181_3687 fibronectin, type III domain-containing protein YP_002464813.1 KEGG: cau:Caur_3008 hypothetical protein YP_002464814.1 KEGG: cau:Caur_3008 hypothetical protein YP_002464815.1 KEGG: cau:Caur_3008 hypothetical protein YP_002464816.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: rca:Rcas_3874 DtxR family iron dependent repressor YP_002464817.1 PFAM: FeoA family protein; KEGG: rrs:RoseRS_0552 FeoA family protein YP_002464818.1 PFAM: FeoA family protein; KEGG: rrs:RoseRS_0553 FeoA family protein YP_002464819.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: rca:Rcas_4259 small GTP-binding protein YP_002464820.1 PFAM: Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rrs:RoseRS_0555 ferrous iron transport B domain-containing protein YP_002464821.1 PFAM: Protein of unknown function DUF1920; KEGG: rrs:RoseRS_0556 hypothetical protein YP_002464822.1 PFAM: protein of unknown function DUF161; KEGG: cau:Caur_3019 hypothetical protein YP_002464823.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_002464824.1 KEGG: cau:Caur_2977 diguanylate cyclase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002464825.1 KEGG: cau:Caur_2978 hypothetical protein YP_002464826.1 KEGG: cau:Caur_3007 xanthine dehydrogenase YP_002464827.1 PFAM: periplasmic solute binding protein; KEGG: cau:Caur_0197 periplasmic solute binding protein YP_002464828.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0196 ABC transporter related YP_002464829.1 PFAM: ABC-3 protein; KEGG: cau:Caur_0195 ABC-3 protein YP_002464830.1 PFAM: ABC-3 protein; KEGG: cau:Caur_0194 ABC-3 protein YP_002464831.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: cau:Caur_0207 TrkA domain-containing protein YP_002464832.1 PFAM: cation transporter; KEGG: cau:Caur_0208 H(+)-transporting two-sector ATPase YP_002464833.1 KEGG: cau:Caur_0209 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002464834.1 KEGG: cau:Caur_3025 aIF-2BI family translation initiation factor; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_002464835.1 KEGG: cau:Caur_3024 hypothetical protein YP_002464836.1 PFAM: PfkB domain protein; KEGG: cau:Caur_3023 ribokinase-like domain-containing protein YP_002464837.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cau:Caur_3022 oxidoreductase domain-containing protein YP_002464838.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_002464839.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_002464840.1 PFAM: protein of unknown function DUF161; KEGG: cau:Caur_3019 hypothetical protein YP_002464842.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: cau:Caur_3018 threonyl/alanyl tRNA synthetase SAD YP_002464843.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: cau:Caur_3017 tRNA pseudouridine synthase B YP_002464844.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cau:Caur_3016 phosphoesterase domain-containing protein YP_002464845.1 PFAM: protein of unknown function DUF820; KEGG: rca:Rcas_2195 hypothetical protein YP_002464846.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: cau:Caur_2970 glutamyl-tRNA(Gln) amidotransferase, B subunit YP_002464847.1 PFAM: SH3 type 3 domain protein; KEGG: cau:Caur_2971 SH3 type 3 domain-containing protein YP_002464848.1 PFAM: thymidylate synthase complementing protein ThyX; KEGG: cau:Caur_0354 thymidylate synthase complementing protein ThyX YP_002464850.1 TIGRFAM: YD repeat protein; PFAM: cell wall hydrolase/autolysin; YD repeat-containing protein; KEGG: mba:Mbar_A3399 hypothetical protein YP_002464851.1 PFAM: FG-GAP repeat protein; KEGG: hch:HCH_06456 FG-GAP repeat-containing protein YP_002464852.1 PFAM: Phosphoglycerate mutase; KEGG: cau:Caur_0353 phosphoglycerate mutase YP_002464853.1 PFAM: RDD domain containing protein; KEGG: cau:Caur_0352 RDD domain-containing protein YP_002464854.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002464855.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_0350 GCN5-related N-acetyltransferase YP_002464856.1 PFAM: alpha/beta hydrolase fold; KEGG: cau:Caur_0349 alpha/beta hydrolase fold-containing protein YP_002464857.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_002464858.1 KEGG: cau:Caur_0347 hypothetical protein YP_002464859.1 PFAM: putative RNA methylase; Methyltransferase type 11; KEGG: cau:Caur_0346 putative RNA methylase YP_002464860.1 KEGG: cau:Caur_0345 hypothetical protein YP_002464861.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_002464862.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002464863.1 PFAM: histone deacetylase superfamily; KEGG: cau:Caur_0342 histone deacetylase superfamily protein YP_002464864.1 KEGG: cau:Caur_0341 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_002464865.1 KEGG: hau:Haur_2909 hypothetical protein YP_002464866.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_0338 glycosyl transferase family protein YP_002464867.1 PFAM: band 7 protein; KEGG: cau:Caur_0337 band 7 protein YP_002464868.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rca:Rcas_3336 thioredoxin YP_002464869.1 KEGG: cau:Caur_0336 hypothetical protein YP_002464870.1 KEGG: cau:Caur_0335 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_002464871.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; lysine biosynthesis enzyme LysX; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: cau:Caur_0334 lysine biosynthesis enzyme LysX YP_002464872.1 TIGRFAM: lysine biosynthesis protein LysW; KEGG: cau:Caur_0332 lysine biosynthesis protein LysW YP_002464873.1 TIGRFAM: lysine biosynthesis protein LysW; KEGG: cau:Caur_0332 lysine biosynthesis protein LysW YP_002464874.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: cau:Caur_0331 3-isopropylmalate dehydrogenase YP_002464875.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis YP_002464876.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis YP_002464877.1 PFAM: pyruvate carboxyltransferase; KEGG: cau:Caur_0328 pyruvate carboxyltransferase YP_002464878.1 PFAM: band 7 protein; KEGG: cau:Caur_0311 band 7 protein YP_002464879.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cau:Caur_0327 cupin 2 domain-containing protein YP_002464880.1 KEGG: cau:Caur_0326 hypothetical protein YP_002464881.1 KEGG: cau:Caur_0310 hypothetical protein YP_002464882.1 KEGG: cau:Caur_0309 hypothetical protein YP_002464883.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: cau:Caur_0308 chaperone DnaJ domain-containing protein YP_002464884.1 KEGG: cau:Caur_0307 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein YP_002464885.1 KEGG: cau:Caur_0306 hypothetical protein YP_002464886.1 KEGG: cau:Caur_0305 hypothetical protein YP_002464887.1 KEGG: cau:Caur_0304 molecular chaperone (small heat shock protein)-like protein YP_002464888.1 KEGG: cau:Caur_0303 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_002464889.1 PFAM: DSBA oxidoreductase; KEGG: cau:Caur_0302 DsbA oxidoreductase YP_002464890.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: cau:Caur_0301 2'-5' RNA ligase YP_002464891.1 PFAM: Vitamin K epoxide reductase; KEGG: cau:Caur_0293 vitamin K epoxide reductase YP_002464892.1 KEGG: cau:Caur_0281 hypothetical protein YP_002464893.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002464894.1 KEGG: cau:Caur_0279 phosphoheptose isomerase YP_002464895.1 KEGG: cau:Caur_2336 hypothetical protein YP_002464896.1 KEGG: hau:Haur_0153 molecular chaperone-like protein YP_002464897.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_0277 extracellular solute-binding protein YP_002464898.1 PFAM: Roadblock/LC7 family protein; KEGG: cau:Caur_0276 roadblock/LC7 family protein YP_002464899.1 PFAM: protein of unknown function DUF124; KEGG: cau:Caur_0275 hypothetical protein YP_002464900.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_002464901.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_002464902.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0272 ABC transporter related YP_002464903.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: cau:Caur_0270 GAF domain-containing protein YP_002464904.1 PFAM: Integral membrane protein TerC; KEGG: cau:Caur_0269 integral membrane protein TerC YP_002464905.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: cau:Caur_0268 N-acetylmuramoyl-L-alanine amidase YP_002464906.1 KEGG: cau:Caur_0267 polymorphic outer membrane protein YP_002464907.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_0266 phosphate binding protein YP_002464908.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0265 phosphate ABC transporter, inner membrane subunit PstC YP_002464909.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_0264 phosphate ABC transporter, inner membrane subunit PstA YP_002464910.1 KEGG: cau:Caur_0263 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_002464911.1 required for 70S ribosome assembly YP_002464912.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cau:Caur_0260 DegV family protein YP_002464913.1 catalyzes branch migration in Holliday junction intermediates YP_002464914.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: cau:Caur_0262 E3 binding domain-containing protein YP_002464915.1 PFAM: phosphofructokinase; KEGG: cau:Caur_0258 6-phosphofructokinase YP_002464916.1 KEGG: cau:Caur_0257 hypothetical protein YP_002464917.1 KEGG: cau:Caur_0256 hypothetical protein YP_002464918.1 KEGG: cau:Caur_0255 hypothetical protein YP_002464919.1 KEGG: cau:Caur_0254 hypothetical protein YP_002464920.1 KEGG: cau:Caur_0253 hypothetical protein YP_002464921.1 KEGG: cau:Caur_0252 hypothetical protein YP_002464922.1 KEGG: cau:Caur_0251 hypothetical protein YP_002464923.1 catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_002464924.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cau:Caur_0249 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_002464925.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cau:Caur_0248 peptidylprolyl isomerase YP_002464926.1 KEGG: cau:Caur_0247 UV damage repair endonuclease-like protein YP_002464927.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cau:Caur_0246 TPR repeat-containing protein YP_002464928.1 KEGG: cau:Caur_0245 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_002464929.1 PFAM: HhH-GPD family protein; KEGG: cau:Caur_0244 DNA-3-methyladenine glycosylase II YP_002464931.1 KEGG: cau:Caur_0242 hypothetical protein YP_002464932.1 KEGG: cau:Caur_0241 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase YP_002464933.1 KEGG: cau:Caur_0030 hypothetical protein YP_002464934.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: cau:Caur_0029 protoheme IX farnesyltransferase YP_002464935.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: cau:Caur_0028 iron-sulfur cluster assembly accessory protein YP_002464936.1 PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: cau:Caur_0027 formylmethanofuran dehydrogenase subunit E region YP_002464937.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; Inorganic pyrophosphatase; KEGG: cau:Caur_0025 molybdopterin oxidoreductase YP_002464938.1 PFAM: Polysulphide reductase NrfD; KEGG: cau:Caur_0024 polysulphide reductase NrfD YP_002464939.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cau:Caur_0023 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_002464940.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: cau:Caur_0022 response regulator receiver YP_002464941.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_0021 ATPase domain-containing protein YP_002464942.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: cau:Caur_0020 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_002464943.1 KEGG: maq:Maqu_3276 bile acid:sodium symporter YP_002464944.1 PFAM: protein of unknown function DUF81; KEGG: rca:Rcas_3621 hypothetical protein YP_002464945.1 PFAM: permease; KEGG: cau:Caur_0015 permease YP_002464946.1 TIGRFAM: redox-active disulfide protein 2; KEGG: cau:Caur_0014 redox-active disulfide protein 2 YP_002464947.1 PFAM: regulatory protein ArsR; KEGG: cau:Caur_0013 regulatory protein ArsR YP_002464948.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bbr:BB2505 MerR family transcriptional regulator YP_002464949.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_0011 major facilitator transporter YP_002464950.1 KEGG: cau:Caur_0010 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_002464951.1 PFAM: methyltransferase small; Methyltransferase type 12; KEGG: cau:Caur_3015 methyltransferase small YP_002464952.1 PFAM: ribosome-binding factor A; KEGG: cau:Caur_3014 ribosome-binding factor A YP_002464953.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_002464954.1 PFAM: protein of unknown function DUF448; KEGG: cau:Caur_3012 hypothetical protein YP_002464955.1 KEGG: cau:Caur_3011 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; SMART: KH domain protein YP_002464956.1 KEGG: cau:Caur_3010 hypothetical protein YP_002464957.1 KEGG: cau:Caur_3009 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_002464958.1 KEGG: rca:Rcas_2295 hypothetical protein YP_002464959.1 KEGG: cau:Caur_3008 hypothetical protein YP_002464960.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_0198 GCN5-related N-acetyltransferase YP_002464961.1 KEGG: cph:Cpha266_1670 hypothetical protein YP_002464962.1 PFAM: protein of unknown function DUF355; KEGG: rrs:RoseRS_1110 hypothetical protein YP_002464963.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rca:Rcas_1791 YbaK/prolyl-tRNA synthetase associated region YP_002464965.1 KEGG: rrs:RoseRS_2584 hypothetical protein YP_002464966.1 KEGG: hau:Haur_5156 hypothetical protein YP_002464967.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2583 TPR repeat-containing protein YP_002464972.1 PFAM: diacylglycerol kinase catalytic region; KEGG: cau:Caur_2704 diacylglycerol kinase catalytic region YP_002464973.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002464974.1 PFAM: protein of unknown function DUF343; KEGG: cau:Caur_2706 hypothetical protein YP_002464975.1 KEGG: cau:Caur_2707 metallophosphoesterase YP_002464976.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: cau:Caur_2708 phosphoribosylanthranilate isomerase YP_002464977.1 PFAM: protein of unknown function DUF88; KEGG: cau:Caur_2709 hypothetical protein YP_002464978.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_2710 glycosyl transferase family protein YP_002464979.1 PFAM: inositol monophosphatase; KEGG: cau:Caur_2716 inositol-phosphate phosphatase YP_002464980.1 PFAM: Radical SAM domain protein; KEGG: cau:Caur_2717 radical SAM domain-containing protein YP_002464981.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: cau:Caur_2718 ribosomal-protein-alanine acetyltransferase YP_002464982.1 KEGG: cau:Caur_2719 hypothetical protein YP_002464983.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP YP_002464984.1 PFAM: Stage V sporulation protein S; KEGG: cau:Caur_2723 stage V sporulation protein S YP_002464985.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: cau:Caur_2724 protein of unknown function DUF294 nucleotidyltransferase putative YP_002464986.1 KEGG: cau:Caur_2725 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_002464987.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cau:Caur_2731 alanine racemase YP_002464988.1 PFAM: extracellular solute-binding protein family 1; KEGG: cau:Caur_2730 extracellular solute-binding protein YP_002464989.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_2729 binding-protein-dependent transport systems inner membrane component YP_002464990.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cau:Caur_2728 binding-protein-dependent transport systems inner membrane component YP_002464991.1 PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: cau:Caur_2727 glycosyl hydrolase family 32 protein YP_002464992.1 KEGG: cau:Caur_3149 hypothetical protein YP_002464993.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: cau:Caur_3150 aconitate hydratase 1 YP_002464994.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: cau:Caur_3726 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_002464995.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_002464997.1 KEGG: cau:Caur_3728 hypothetical protein YP_002464998.1 KEGG: cau:Caur_3729 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_002464999.1 KEGG: cau:Caur_3730 colicin V production protein YP_002465000.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_002465001.1 PFAM: carbohydrate kinase FGGY; KEGG: cau:Caur_3818 carbohydrate kinase FGGY YP_002465002.1 PFAM: tyrosine protein kinase; Pyrrolo-quinoline quinone; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_3817 protein kinase YP_002465003.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cau:Caur_3816 protein phosphatase 2C-like protein YP_002465004.1 PFAM: von Willebrand factor type A; KEGG: cau:Caur_3815 von Willebrand factor type A YP_002465005.1 PFAM: Forkhead-associated protein; KEGG: cau:Caur_3814 forkhead-associated protein YP_002465006.1 KEGG: cau:Caur_3813 hypothetical protein YP_002465007.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cau:Caur_3812 arginase/agmatinase/formiminoglutamase YP_002465008.1 PFAM: major facilitator superfamily MFS_1; KEGG: cau:Caur_3811 major facilitator transporter YP_002465009.1 KEGG: cau:Caur_3810 hypothetical protein YP_002465010.1 KEGG: cau:Caur_3809 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_002465011.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002465012.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cau:Caur_3095 hypothetical protein YP_002465013.1 KEGG: cau:Caur_3096 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_002465014.1 KEGG: cau:Caur_3097 hypothetical protein YP_002465015.1 PFAM: SNARE associated Golgi protein; KEGG: cau:Caur_3098 SNARE associated Golgi protein YP_002465016.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cau:Caur_3099 ATPase domain-containing protein YP_002465017.1 PFAM: NUDIX hydrolase; KEGG: cau:Caur_3100 NUDIX hydrolase YP_002465018.1 PFAM: putative methyltransferase; KEGG: cau:Caur_3101 putative methyltransferase YP_002465019.1 PFAM: protein of unknown function UPF0153; KEGG: cau:Caur_3102 hypothetical protein YP_002465020.1 KEGG: cau:Caur_3103 hypothetical protein YP_002465021.1 PFAM: LrgB family protein; KEGG: cau:Caur_3104 LrgB family protein YP_002465022.1 PFAM: LrgA family protein; KEGG: cau:Caur_3105 LrgA family protein YP_002465023.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002465024.1 KEGG: cau:Caur_3107 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_002465025.1 KEGG: cau:Caur_3108 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_002465026.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: cau:Caur_3109 PfpI family intracellular peptidase YP_002465027.1 PFAM: von Willebrand factor type A; protein of unknown function DUF1355; KEGG: cau:Caur_3110 von Willebrand factor type A YP_002465028.1 KEGG: cau:Caur_3111 hypothetical protein YP_002465029.1 KEGG: cau:Caur_3112 UvrD/REP helicase YP_002465030.1 KEGG: cau:Caur_3113 hypothetical protein YP_002465031.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_3114 RNA polymerase sigma-70 factor YP_002465032.1 KEGG: similar to hedgehog protein YP_002465033.1 PFAM: basic membrane lipoprotein; KEGG: cau:Caur_3116 basic membrane lipoprotein YP_002465034.1 PFAM: band 7 protein; KEGG: cau:Caur_3117 band 7 protein YP_002465035.1 PFAM: band 7 protein; KEGG: cau:Caur_3118 band 7 protein YP_002465036.1 TIGRFAM: prevent-host-death family protein; KEGG: cau:Caur_3119 prevent-host-death family protein YP_002465037.1 PFAM: heat shock protein Hsp20; KEGG: cau:Caur_3120 heat shock protein HSP20 YP_002465038.1 PFAM: dehydrogenase E1 component; KEGG: cau:Caur_3121 pyruvate dehydrogenase (acetyl-transferring) YP_002465039.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_3122 transketolase central region YP_002465040.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: cau:Caur_2954 DNA mismatch repair protein MutS YP_002465041.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: cau:Caur_2955 riboflavin biosynthesis protein RibF YP_002465042.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: cau:Caur_2956 3-hydroxybutyrate dehydrogenase YP_002465043.1 PFAM: adenylate kinase; SMART: AAA ATPase; KEGG: cau:Caur_2957 adenylate kinase YP_002465044.1 PFAM: protein of unknown function RIO1; tyrosine protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: cau:Caur_2958 protein kinase YP_002465045.1 KEGG: cau:Caur_2959 hypothetical protein YP_002465046.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cau:Caur_2960 nucleotidyl transferase YP_002465047.1 PFAM: RNA binding S1 domain protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: cau:Caur_2961 RNA-binding S1 domain-containing protein YP_002465048.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_2962 AMP-dependent synthetase and ligase YP_002465049.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002465050.1 PFAM: protein of unknown function DUF299; KEGG: cau:Caur_2965 hypothetical protein YP_002465051.1 PFAM: alpha/beta hydrolase fold; cyclic nucleotide-binding; KEGG: cau:Caur_2966 alpha/beta hydrolase fold-containing protein YP_002465052.1 KEGG: cau:Caur_2967 hypothetical protein YP_002465053.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: cau:Caur_2968 NAD-dependent epimerase/dehydratase YP_002465054.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle YP_002465055.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: cau:Caur_0009 septum site-determining protein MinC YP_002465056.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cau:Caur_0008 septum site-determining protein MinD YP_002465057.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell YP_002465058.1 PFAM: protein of unknown function UPF0118; KEGG: cau:Caur_0006 hypothetical protein YP_002465059.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: cau:Caur_0005 GTP-binding protein Era YP_002465060.1 PFAM: protein of unknown function RIO1; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_0004 protein kinase YP_002465061.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_0003 acetate--CoA ligase YP_002465062.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cau:Caur_0002 AMP-dependent synthetase and ligase YP_002465063.1 PFAM: UspA domain protein; KEGG: cau:Caur_2530 UspA domain-containing protein YP_002465064.1 KEGG: cau:Caur_2529 hypothetical protein YP_002465065.1 PFAM: MOSC domain containing protein; KEGG: cau:Caur_2528 MOSC domain-containing protein YP_002465066.1 PFAM: UspA domain protein; KEGG: cau:Caur_2527 UspA domain-containing protein YP_002465067.1 KEGG: cau:Caur_2524 hypothetical protein YP_002465069.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cau:Caur_2523 glucose-1-phosphate adenylyltransferase YP_002465070.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: cau:Caur_2522 nucleotidyl transferase YP_002465071.1 KEGG: cau:Caur_2521 SAM-dependent methyltransferase YP_002465072.1 PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: cau:Caur_2520 glycosyl transferase group 1 YP_002465073.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002465074.1 KEGG: cau:Caur_2518 hypothetical protein YP_002465075.1 PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cau:Caur_2517 prephenate dehydrogenase YP_002465076.1 PFAM: Abortive infection protein; KEGG: cau:Caur_2515 abortive infection protein YP_002465077.1 PFAM: homogentisate 12-dioxygenase; KEGG: cau:Caur_2513 homogentisate 12-dioxygenase YP_002465078.1 KEGG: cau:Caur_2512 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_002465079.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cau:Caur_2510 peptidase M20 YP_002465080.1 PFAM: Ferritin Dps family protein; KEGG: cau:Caur_3918 ferroxidase YP_002465081.1 PFAM: protein of unknown function DUF88; KEGG: rca:Rcas_4231 hypothetical protein YP_002465082.1 KEGG: rrs:RoseRS_2587 hypothetical protein YP_002465083.1 KEGG: trq:TRQ2_0317 hypothetical protein YP_002465084.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: tye:THEYE_A1093 CRISPR-associated RAMP protein, Cmr4 family YP_002465085.1 KEGG: trq:TRQ2_0315 CRISPR-associated Csx11 family protein YP_002465086.1 PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_2591 hypothetical protein YP_002465087.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; PFAM: Collagen triple helix repeat; KEGG: rca:Rcas_4232 CRISPR-associated RAMP Cmr1 family protein YP_002465088.1 KEGG: rca:Rcas_4233 hypothetical protein YP_002465089.1 KEGG: rca:Rcas_4234 hypothetical protein YP_002465090.1 PFAM: AIG2 family protein; KEGG: rca:Rcas_4235 AIG2 family protein YP_002465092.1 KEGG: rca:Rcas_4236 hypothetical protein YP_002465093.1 KEGG: rca:Rcas_4237 hypothetical protein YP_002465095.1 KEGG: rca:Rcas_4238 hypothetical protein YP_002465096.1 KEGG: rca:Rcas_4239 hypothetical protein YP_002465097.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_4240 CRISPR-associated RAMP Cmr4 family protein family protein YP_002465098.1 TIGRFAM: CRISPR-associated protein, Csx11 family; KEGG: rca:Rcas_4241 CRISPR-associated Csx11 family protein YP_002465099.1 PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_4242 hypothetical protein YP_002465100.1 KEGG: rca:Rcas_4243 hypothetical protein YP_002465101.1 KEGG: rca:Rcas_4244 hypothetical protein YP_002465102.1 TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: rca:Rcas_4245 CRISPR-associated RAMP Cmr1 family protein YP_002465103.1 KEGG: GH12647 gene product from transcript GH12647-RA YP_002465104.1 TIGRFAM: photosynthetic complex assembly protein 2; KEGG: cau:Caur_3919 hypothetical protein YP_002465105.1 TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain protein; PFAM: CoA-binding domain protein; KEGG: cau:Caur_3920 acetyl coenzyme A synthetase subunit alpha YP_002465106.1 PFAM: DRTGG domain protein; KEGG: cau:Caur_3921 DRTGG domain-containing protein YP_002465107.1 KEGG: cau:Caur_3922 hypothetical protein YP_002465108.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_002465109.1 KEGG: cau:Caur_3924 hypothetical protein YP_002465110.1 KEGG: cau:Caur_3925 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_002465111.1 PFAM: phosphoribosyltransferase; KEGG: cau:Caur_3926 phosphoribosyltransferase YP_002465112.1 KEGG: cau:Caur_3927 hypothetical protein YP_002465113.1 KEGG: cau:Caur_3928 hypothetical protein YP_002465114.1 KEGG: cau:Caur_3929 hypothetical protein YP_002465115.1 KEGG: cau:Caur_3930 hypothetical protein YP_002465116.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cau:Caur_3931 sigma-70 family RNA polymerase sigma factor YP_002465117.1 KEGG: cau:Caur_3932 hypothetical protein YP_002465118.1 PFAM: inner-membrane translocator; KEGG: cau:Caur_3933 inner-membrane translocator YP_002465119.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: cau:Caur_3934 segregation and condensation protein B