-- dump date 20140619_041008 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 340177000001 SEQ_END SEQ_END NC_007514.1 2572079 2572079 DR NC_007514.1; contig end 2572079..2572079 Chlorobium chlorochromatii CaD3 YP_378323.1 CDS dnaA NC_007514.1 346 1824 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 346..1824 Chlorobium chlorochromatii CaD3 3747794 YP_378324.1 CDS Cag_0002 NC_007514.1 2113 3237 D DNA polymerase III subunit beta 2113..3237 Chlorobium chlorochromatii CaD3 3747795 YP_378325.1 CDS Cag_0003 NC_007514.1 3251 4345 D RecF protein 3251..4345 Chlorobium chlorochromatii CaD3 3747796 YP_378326.1 CDS Cag_0004 NC_007514.1 4354 5295 R hypothetical protein complement(4354..5295) Chlorobium chlorochromatii CaD3 3747797 YP_378327.1 CDS Cag_0005 NC_007514.1 5321 7048 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(5321..7048) Chlorobium chlorochromatii CaD3 3747874 YP_378328.1 CDS Cag_0006 NC_007514.1 7276 8118 R orotidine 5'-phosphate decarboxylase subfamily protein complement(7276..8118) Chlorobium chlorochromatii CaD3 3747876 YP_378329.1 CDS Cag_0007 NC_007514.1 8311 10410 D peptidase M41, FtsH 8311..10410 Chlorobium chlorochromatii CaD3 3747877 YP_378330.1 CDS Cag_0008 NC_007514.1 10861 12009 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 10861..12009 Chlorobium chlorochromatii CaD3 3747878 YP_378331.1 CDS Cag_0009 NC_007514.1 12186 13547 D peptidase M50 membrane-associated zinc metallopeptidase 12186..13547 Chlorobium chlorochromatii CaD3 3747879 YP_378332.1 CDS prfA NC_007514.1 13563 14636 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 13563..14636 Chlorobium chlorochromatii CaD3 3747880 YP_378333.1 CDS Cag_0011 NC_007514.1 14728 15366 D hypothetical protein 14728..15366 Chlorobium chlorochromatii CaD3 3747881 YP_378334.1 CDS Cag_0012 NC_007514.1 15391 15780 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(15391..15780) Chlorobium chlorochromatii CaD3 3747882 YP_378335.1 CDS Cag_0013 NC_007514.1 15817 16050 R hypothetical protein complement(15817..16050) Chlorobium chlorochromatii CaD3 3747883 YP_378336.1 CDS Cag_0014 NC_007514.1 16209 16631 D Holliday junction resolvase YqgF 16209..16631 Chlorobium chlorochromatii CaD3 3747884 YP_378337.1 CDS Cag_0015 NC_007514.1 16701 16988 D hypothetical protein 16701..16988 Chlorobium chlorochromatii CaD3 3747885 YP_378338.1 CDS Cag_0016 NC_007514.1 16981 17355 D hypothetical protein 16981..17355 Chlorobium chlorochromatii CaD3 3747886 YP_378339.1 CDS pyrE NC_007514.1 17432 18019 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 17432..18019 Chlorobium chlorochromatii CaD3 3747887 YP_378340.1 CDS Cag_0018 NC_007514.1 18027 18893 D prephenate dehydrogenase 18027..18893 Chlorobium chlorochromatii CaD3 3747888 YP_378341.1 CDS Cag_0019 NC_007514.1 18890 19750 D NAD+ kinase 18890..19750 Chlorobium chlorochromatii CaD3 3747889 YP_378342.1 CDS Cag_0020 NC_007514.1 19790 21253 D hypothetical protein 19790..21253 Chlorobium chlorochromatii CaD3 3747890 YP_378343.1 CDS Cag_0021 NC_007514.1 21262 22461 D hypothetical protein 21262..22461 Chlorobium chlorochromatii CaD3 3747891 YP_378344.1 CDS Cag_0022 NC_007514.1 22529 23458 R patatin family protein complement(22529..23458) Chlorobium chlorochromatii CaD3 3746991 YP_378345.1 CDS Cag_0023 NC_007514.1 23776 24714 D peptide chain release factor 2 23776..24714 Chlorobium chlorochromatii CaD3 3746992 YP_378346.1 CDS Cag_0024 NC_007514.1 24724 25554 D hypothetical protein 24724..25554 Chlorobium chlorochromatii CaD3 3746993 YP_378347.1 CDS mscL NC_007514.1 25717 26184 R forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(25717..26184) Chlorobium chlorochromatii CaD3 3746994 YP_378348.1 CDS secD NC_007514.1 26628 28544 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 26628..28544 Chlorobium chlorochromatii CaD3 3746995 YP_378349.1 CDS secF NC_007514.1 28632 29564 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 28632..29564 Chlorobium chlorochromatii CaD3 3746996 YP_378350.1 CDS Cag_0028 NC_007514.1 29679 30995 D peptidyl-prolyl cis-trans isomerase SurA 29679..30995 Chlorobium chlorochromatii CaD3 3746997 YP_378351.1 CDS Cag_0029 NC_007514.1 31358 33271 R DNA gyrase subunit B complement(31358..33271) Chlorobium chlorochromatii CaD3 3746998 YP_378352.1 CDS Cag_0030 NC_007514.1 33852 34154 D (2Fe-2S) ferredoxin 33852..34154 Chlorobium chlorochromatii CaD3 3746999 YP_378353.1 CDS Cag_0031 NC_007514.1 34161 34343 R hypothetical protein complement(34161..34343) Chlorobium chlorochromatii CaD3 3747000 YP_378354.1 CDS Cag_0032 NC_007514.1 34369 34647 R hypothetical protein complement(34369..34647) Chlorobium chlorochromatii CaD3 3747001 YP_378355.1 CDS Cag_0033 NC_007514.1 34929 36197 R hypothetical protein complement(34929..36197) Chlorobium chlorochromatii CaD3 3747002 YP_378356.1 CDS Cag_0034 NC_007514.1 36458 37150 R hypothetical protein complement(36458..37150) Chlorobium chlorochromatii CaD3 3747005 YP_378357.1 CDS Cag_0035 NC_007514.1 37150 38292 R geranylgeranyl reductase complement(37150..38292) Chlorobium chlorochromatii CaD3 3747006 YP_378358.1 CDS Cag_0036 NC_007514.1 38299 39768 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(38299..39768) Chlorobium chlorochromatii CaD3 3747007 YP_378359.1 CDS Cag_0037 NC_007514.1 39973 40950 D hypothetical protein 39973..40950 Chlorobium chlorochromatii CaD3 3747008 YP_378360.1 CDS Cag_0038 NC_007514.1 41185 42159 D hypothetical protein 41185..42159 Chlorobium chlorochromatii CaD3 3747237 YP_378361.1 CDS Cag_0039 NC_007514.1 42581 44194 R EmrB/QacA family drug resistance transporter complement(42581..44194) Chlorobium chlorochromatii CaD3 3747238 YP_378362.1 CDS Cag_0040 NC_007514.1 44199 45227 R multidrug resistance protein A complement(44199..45227) Chlorobium chlorochromatii CaD3 3747239 YP_378363.1 CDS Cag_0041 NC_007514.1 45345 46718 R hypothetical protein complement(45345..46718) Chlorobium chlorochromatii CaD3 3747240 YP_378364.1 CDS Cag_0042 NC_007514.1 47090 48994 R hypothetical protein complement(47090..48994) Chlorobium chlorochromatii CaD3 3747241 YP_378365.1 CDS Cag_0043 NC_007514.1 49023 49817 R hypothetical protein complement(49023..49817) Chlorobium chlorochromatii CaD3 3747242 YP_378366.1 CDS pgk NC_007514.1 49892 51085 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(49892..51085) Chlorobium chlorochromatii CaD3 3747243 YP_378367.1 CDS Cag_0045 NC_007514.1 51249 52259 R aminodeoxychorismate lyase complement(51249..52259) Chlorobium chlorochromatii CaD3 3747244 YP_378368.1 CDS Cag_0046 NC_007514.1 52277 52603 R chorismate mutase complement(52277..52603) Chlorobium chlorochromatii CaD3 3747245 YP_378369.1 CDS Cag_0047 NC_007514.1 52929 53915 D methyltransferase 52929..53915 Chlorobium chlorochromatii CaD3 3747246 YP_378370.1 CDS Cag_0048 NC_007514.1 53994 54224 D hypothetical protein 53994..54224 Chlorobium chlorochromatii CaD3 3747247 YP_378371.1 CDS Cag_0049 NC_007514.1 54326 56317 D penicillin-binding protein 3 54326..56317 Chlorobium chlorochromatii CaD3 3747248 YP_378372.1 CDS Cag_0050 NC_007514.1 56323 57873 D UDP-N-acetylmuramyl-tripeptide synthetase 56323..57873 Chlorobium chlorochromatii CaD3 3747249 YP_378373.1 CDS Cag_0051 NC_007514.1 58082 59512 D UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase 58082..59512 Chlorobium chlorochromatii CaD3 3747250 YP_378374.1 CDS mraY NC_007514.1 59660 60766 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 59660..60766 Chlorobium chlorochromatii CaD3 3747251 YP_378375.1 CDS Cag_0053 NC_007514.1 60769 62163 D UDP-N-acetylmuramoylalanine-D-glutamate ligase 60769..62163 Chlorobium chlorochromatii CaD3 3747252 YP_378376.1 CDS Cag_0054 NC_007514.1 62160 63374 D cell cycle protein FtsW 62160..63374 Chlorobium chlorochromatii CaD3 3747253 YP_378377.1 CDS murG NC_007514.1 63371 64459 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 63371..64459 Chlorobium chlorochromatii CaD3 3747254 YP_378378.1 CDS murC NC_007514.1 64680 66083 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 64680..66083 Chlorobium chlorochromatii CaD3 3747255 YP_378379.1 CDS Cag_0057 NC_007514.1 66233 67108 D cell division protein FtsQ 66233..67108 Chlorobium chlorochromatii CaD3 3746391 YP_378380.1 CDS Cag_0058 NC_007514.1 67141 68448 D cell division protein FtsA 67141..68448 Chlorobium chlorochromatii CaD3 3746392 YP_378381.1 CDS Cag_0059 NC_007514.1 68500 69783 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 68500..69783 Chlorobium chlorochromatii CaD3 3746393 YP_378382.1 CDS Cag_0060 NC_007514.1 69885 71177 D 4-hydroxybutyrate CoA-transferase 69885..71177 Chlorobium chlorochromatii CaD3 3746394 YP_378383.1 CDS Cag_0061 NC_007514.1 71235 72002 R hypothetical protein complement(71235..72002) Chlorobium chlorochromatii CaD3 3746395 YP_378384.1 CDS Cag_0062 NC_007514.1 72153 72440 D hypothetical protein 72153..72440 Chlorobium chlorochromatii CaD3 3746396 YP_378385.1 CDS Cag_0063 NC_007514.1 72485 72865 D hypothetical protein 72485..72865 Chlorobium chlorochromatii CaD3 3746397 YP_378386.1 CDS Cag_0064 NC_007514.1 72869 73906 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 72869..73906 Chlorobium chlorochromatii CaD3 3746398 YP_378387.1 CDS Cag_0065 NC_007514.1 74018 74245 D ATP synthase F0 subunit C 74018..74245 Chlorobium chlorochromatii CaD3 3746399 YP_378388.1 CDS Cag_0066 NC_007514.1 74350 74877 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 74350..74877 Chlorobium chlorochromatii CaD3 3746400 YP_378389.1 CDS Cag_0067 NC_007514.1 74894 75433 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 74894..75433 Chlorobium chlorochromatii CaD3 3746401 YP_378390.1 CDS Cag_0068 NC_007514.1 75750 76685 D lipoprotein 75750..76685 Chlorobium chlorochromatii CaD3 3746402 YP_378391.1 CDS Cag_0069 NC_007514.1 76707 77282 D nicotinate-nucleotide adenylyltransferase 76707..77282 Chlorobium chlorochromatii CaD3 3746403 YP_378392.1 CDS argS NC_007514.1 77346 79004 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(77346..79004) Chlorobium chlorochromatii CaD3 3746404 YP_378393.1 CDS Cag_0071 NC_007514.1 79067 79771 R Beta-phosphoglucomutase hydrolase complement(79067..79771) Chlorobium chlorochromatii CaD3 3746405 YP_378394.1 CDS Cag_0072 NC_007514.1 79762 80826 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(79762..80826) Chlorobium chlorochromatii CaD3 3746406 YP_378395.1 CDS Cag_0073 NC_007514.1 81266 82315 D transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine; deoxyhypusine synthase-like protein 81266..82315 Chlorobium chlorochromatii CaD3 3746407 YP_378396.1 CDS Cag_0074 NC_007514.1 82330 82998 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 82330..82998 Chlorobium chlorochromatii CaD3 3746408 YP_378397.1 CDS Cag_0075 NC_007514.1 83182 85578 R DNA topoisomerase I complement(83182..85578) Chlorobium chlorochromatii CaD3 3746409 YP_378398.1 CDS Cag_0076 NC_007514.1 85769 87493 D cell wall hydrolase/autolysin 85769..87493 Chlorobium chlorochromatii CaD3 3746410 YP_378399.1 CDS Cag_0077 NC_007514.1 87595 88578 D biotin--acetyl-CoA-carboxylase ligase 87595..88578 Chlorobium chlorochromatii CaD3 3746411 YP_378400.1 CDS Cag_0078 NC_007514.1 88598 89590 D Elongator protein 3/MiaB/NifB 88598..89590 Chlorobium chlorochromatii CaD3 3746412 YP_378401.1 CDS Cag_0079 NC_007514.1 89590 90774 D 8-amino-7-oxononanoate synthase 89590..90774 Chlorobium chlorochromatii CaD3 3746413 YP_378402.1 CDS Cag_0080 NC_007514.1 90774 91547 D hypothetical protein 90774..91547 Chlorobium chlorochromatii CaD3 3746414 YP_378403.1 CDS Cag_0081 NC_007514.1 91532 92317 D biotin biosynthesis protein BioC 91532..92317 Chlorobium chlorochromatii CaD3 3746415 YP_378404.1 CDS bioD NC_007514.1 92326 93009 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 92326..93009 Chlorobium chlorochromatii CaD3 3746416 YP_378405.1 CDS Cag_0083 NC_007514.1 93049 94332 D adenosylmethionine-8-amino-7-oxononanoate aminotransferase 93049..94332 Chlorobium chlorochromatii CaD3 3746417 YP_378406.1 CDS Cag_0084 NC_007514.1 94409 94738 R XRE family transcriptional regulator complement(94409..94738) Chlorobium chlorochromatii CaD3 3746418 YP_378407.1 CDS Cag_0085 NC_007514.1 94725 95057 R phage-like complement(94725..95057) Chlorobium chlorochromatii CaD3 3746419 YP_378408.1 CDS Cag_0086 NC_007514.1 95231 96466 D transposase 95231..96466 Chlorobium chlorochromatii CaD3 3746420 YP_378409.1 CDS Cag_0087 NC_007514.1 96733 97122 D Iojap-like protein 96733..97122 Chlorobium chlorochromatii CaD3 3746422 YP_378410.1 CDS Cag_0088 NC_007514.1 97415 99901 D DNA gyrase, subunit A 97415..99901 Chlorobium chlorochromatii CaD3 3746423 YP_378411.1 CDS pyrG NC_007514.1 100407 102116 D CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 100407..102116 Chlorobium chlorochromatii CaD3 3746424 YP_378412.1 CDS Cag_0091 NC_007514.1 107762 108169 D hypothetical protein 107762..108169 Chlorobium chlorochromatii CaD3 3746425 YP_378413.1 CDS Cag_0092 NC_007514.1 108181 108708 D hypothetical protein 108181..108708 Chlorobium chlorochromatii CaD3 3746426 YP_378414.1 CDS Cag_0093 NC_007514.1 108712 109719 D heptosyltransferase 108712..109719 Chlorobium chlorochromatii CaD3 3746427 YP_378415.1 CDS rpsF NC_007514.1 109940 110338 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 109940..110338 Chlorobium chlorochromatii CaD3 3746428 YP_378416.1 CDS Cag_0095 NC_007514.1 110399 110857 D single-strand binding protein 110399..110857 Chlorobium chlorochromatii CaD3 3747583 YP_378417.1 CDS rpsR NC_007514.1 110910 111188 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 110910..111188 Chlorobium chlorochromatii CaD3 3747584 YP_378418.1 CDS rplI NC_007514.1 111223 111678 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 111223..111678 Chlorobium chlorochromatii CaD3 3747585 YP_378419.1 CDS Cag_0098 NC_007514.1 111785 112417 R hypothetical protein complement(111785..112417) Chlorobium chlorochromatii CaD3 3747586 YP_378420.1 CDS Cag_0099 NC_007514.1 112665 113891 D sulfide dehydrogenase, flavoprotein subunit 112665..113891 Chlorobium chlorochromatii CaD3 3747587 YP_378421.1 CDS trmE NC_007514.1 114064 115485 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 114064..115485 Chlorobium chlorochromatii CaD3 3747588 YP_378422.1 CDS Cag_0101 NC_007514.1 115674 116975 R hypothetical protein complement(115674..116975) Chlorobium chlorochromatii CaD3 3747589 YP_378423.1 CDS Cag_0102 NC_007514.1 116979 117326 R XRE family transcriptional regulator complement(116979..117326) Chlorobium chlorochromatii CaD3 3747590 YP_378424.1 CDS Cag_0103 NC_007514.1 117743 118165 R cytochrome c-555, membrane-bound complement(117743..118165) Chlorobium chlorochromatii CaD3 3747591 YP_378425.1 CDS Cag_0104 NC_007514.1 118404 119819 R Elongator protein 3/MiaB/NifB complement(118404..119819) Chlorobium chlorochromatii CaD3 3747592 YP_378426.1 CDS Cag_0105 NC_007514.1 119823 120446 R hypothetical protein complement(119823..120446) Chlorobium chlorochromatii CaD3 3747593 YP_378427.1 CDS Cag_0106 NC_007514.1 120516 121655 R class V aminotransferase complement(120516..121655) Chlorobium chlorochromatii CaD3 3747594 YP_378428.1 CDS Cag_0107 NC_007514.1 121673 122776 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(121673..122776) Chlorobium chlorochromatii CaD3 3747595 YP_378429.1 CDS Cag_0108 NC_007514.1 122786 123142 R hypothetical protein complement(122786..123142) Chlorobium chlorochromatii CaD3 3747596 YP_378430.1 CDS Cag_0109 NC_007514.1 123241 124293 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(123241..124293) Chlorobium chlorochromatii CaD3 3747597 YP_378431.1 CDS Cag_0110 NC_007514.1 124318 124545 D hypothetical protein 124318..124545 Chlorobium chlorochromatii CaD3 3747598 YP_378432.1 CDS Cag_0111 NC_007514.1 124581 125579 D magnesium chelatase, subunit I 124581..125579 Chlorobium chlorochromatii CaD3 3747599 YP_378433.1 CDS Cag_0112 NC_007514.1 125579 126508 D von Willebrand factor A 125579..126508 Chlorobium chlorochromatii CaD3 3747600 YP_378434.1 CDS Cag_0113 NC_007514.1 126528 127475 D hypothetical protein 126528..127475 Chlorobium chlorochromatii CaD3 3747601 YP_378435.1 CDS Cag_0114 NC_007514.1 127503 129332 R Elongator protein 3/MiaB/NifB complement(127503..129332) Chlorobium chlorochromatii CaD3 3747602 YP_378436.1 CDS Cag_0115 NC_007514.1 129473 130489 R CrtF-like protein complement(129473..130489) Chlorobium chlorochromatii CaD3 3747065 YP_378437.1 CDS Cag_0116 NC_007514.1 130592 131977 R Elongator protein 3/MiaB/NifB complement(130592..131977) Chlorobium chlorochromatii CaD3 3747066 YP_378438.1 CDS Cag_0117 NC_007514.1 132031 133236 R anion-transporting ATPase complement(132031..133236) Chlorobium chlorochromatii CaD3 3747067 YP_378439.1 CDS Cag_0118 NC_007514.1 133602 133814 D hypothetical protein 133602..133814 Chlorobium chlorochromatii CaD3 3747068 YP_378440.1 CDS Cag_0119 NC_007514.1 133896 134516 D hypothetical protein 133896..134516 Chlorobium chlorochromatii CaD3 3747069 YP_378441.1 CDS Cag_0120 NC_007514.1 135000 135632 D hypothetical protein 135000..135632 Chlorobium chlorochromatii CaD3 3747070 YP_378442.1 CDS Cag_0121 NC_007514.1 135930 136190 D hypothetical protein 135930..136190 Chlorobium chlorochromatii CaD3 3747071 YP_378443.1 CDS Cag_0122 NC_007514.1 136281 137522 D LipD protein 136281..137522 Chlorobium chlorochromatii CaD3 3747072 YP_378444.1 CDS Cag_0123 NC_007514.1 137580 140804 D AcrB/AcrD/AcrF family protein 137580..140804 Chlorobium chlorochromatii CaD3 3747074 YP_378445.1 CDS Cag_0124 NC_007514.1 140817 141125 D hypothetical protein 140817..141125 Chlorobium chlorochromatii CaD3 3747075 YP_378446.1 CDS Cag_0125 NC_007514.1 141125 141781 D hydroxyacylglutathione hydrolase 141125..141781 Chlorobium chlorochromatii CaD3 3747076 YP_378447.1 CDS Cag_0126 NC_007514.1 142005 142451 D hypothetical protein 142005..142451 Chlorobium chlorochromatii CaD3 3747077 YP_378448.1 CDS Cag_0127 NC_007514.1 142665 144368 D succinate dehydrogenase or fumarate reductase, flavoprotein subunit 142665..144368 Chlorobium chlorochromatii CaD3 3747078 YP_378449.1 CDS Cag_0128 NC_007514.1 144381 145418 D succinate dehydrogenase/fumarate reductase iron-sulfur protein 144381..145418 Chlorobium chlorochromatii CaD3 3747079 YP_378450.1 CDS Cag_0129 NC_007514.1 145434 146282 D succinate/fumarate oxidoreductase 145434..146282 Chlorobium chlorochromatii CaD3 3747080 YP_378451.1 CDS hemE NC_007514.1 146461 147516 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 146461..147516 Chlorobium chlorochromatii CaD3 3747081 YP_378452.1 CDS Cag_0131 NC_007514.1 147619 148251 D phosphoheptose isomerase 147619..148251 Chlorobium chlorochromatii CaD3 3747082 YP_378453.1 CDS ribH NC_007514.1 148328 148795 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 148328..148795 Chlorobium chlorochromatii CaD3 3747178 YP_378454.1 CDS Cag_0133 NC_007514.1 149294 149536 D hypothetical protein 149294..149536 Chlorobium chlorochromatii CaD3 3747179 YP_378455.1 CDS Cag_0134 NC_007514.1 149804 150520 D hypothetical protein 149804..150520 Chlorobium chlorochromatii CaD3 3747180 YP_378456.1 CDS Cag_0135 NC_007514.1 150630 150794 D hypothetical protein 150630..150794 Chlorobium chlorochromatii CaD3 3747181 YP_378457.1 CDS Cag_0136 NC_007514.1 150794 150889 D hypothetical protein 150794..150889 Chlorobium chlorochromatii CaD3 3747182 YP_378458.1 CDS Cag_0137 NC_007514.1 150909 151619 R 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(150909..151619) Chlorobium chlorochromatii CaD3 3747183 YP_378459.1 CDS Cag_0138 NC_007514.1 151639 152958 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(151639..152958) Chlorobium chlorochromatii CaD3 3747184 YP_378460.1 CDS Cag_0139 NC_007514.1 153005 153967 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(153005..153967) Chlorobium chlorochromatii CaD3 3747185 YP_378461.1 CDS Cag_0140 NC_007514.1 154291 155871 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 154291..155871 Chlorobium chlorochromatii CaD3 3747186 YP_378462.1 CDS Cag_0141 NC_007514.1 155918 156799 D produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 155918..156799 Chlorobium chlorochromatii CaD3 3747187 YP_378463.1 CDS thrA NC_007514.1 157165 159627 D multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 157165..159627 Chlorobium chlorochromatii CaD3 3747188 YP_378464.1 CDS Cag_0143 NC_007514.1 159634 160905 D competence-damaged protein 159634..160905 Chlorobium chlorochromatii CaD3 3747189 YP_378465.1 CDS Cag_0144 NC_007514.1 161116 162813 D ATPase 161116..162813 Chlorobium chlorochromatii CaD3 3747190 YP_378466.1 CDS Cag_0145 NC_007514.1 162849 164783 D DNA mismatch repair protein 162849..164783 Chlorobium chlorochromatii CaD3 3747191 YP_378467.1 CDS Cag_0146 NC_007514.1 165069 165965 D monofunctional biosynthetic peptidoglycan transglycosylase 165069..165965 Chlorobium chlorochromatii CaD3 3747192 YP_378468.1 CDS Cag_0147 NC_007514.1 166003 166161 R rubredoxin complement(166003..166161) Chlorobium chlorochromatii CaD3 3747193 YP_378469.1 CDS Cag_0148 NC_007514.1 166303 167058 D hypothetical protein 166303..167058 Chlorobium chlorochromatii CaD3 3747194 YP_378470.1 CDS Cag_0149 NC_007514.1 167163 167756 D NusG antitermination factor 167163..167756 Chlorobium chlorochromatii CaD3 3747195 YP_378471.1 CDS Cag_0150 NC_007514.1 167801 169042 D hypothetical protein 167801..169042 Chlorobium chlorochromatii CaD3 3747196 YP_378472.1 CDS Cag_0151 NC_007514.1 169072 169362 D hypothetical protein 169072..169362 Chlorobium chlorochromatii CaD3 3747197 YP_378473.1 CDS Cag_0152 NC_007514.1 169359 169835 D hypothetical protein 169359..169835 Chlorobium chlorochromatii CaD3 3747717 YP_378474.1 CDS Cag_0153 NC_007514.1 169918 171174 D hypothetical protein 169918..171174 Chlorobium chlorochromatii CaD3 3747718 YP_378475.1 CDS Cag_0154 NC_007514.1 171329 174184 R excinuclease ABC subunit A complement(171329..174184) Chlorobium chlorochromatii CaD3 3747719 YP_378476.1 CDS Cag_0155 NC_007514.1 174339 177089 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(174339..177089) Chlorobium chlorochromatii CaD3 3747720 YP_378477.1 CDS Cag_0156 NC_007514.1 177361 178239 D ABC transporter permease 177361..178239 Chlorobium chlorochromatii CaD3 3747721 YP_378478.1 CDS Cag_0157 NC_007514.1 178260 179066 R zinc transporter ZupT complement(178260..179066) Chlorobium chlorochromatii CaD3 3747722 YP_378479.1 CDS Cag_0158 NC_007514.1 179185 179661 R CrtK protein complement(179185..179661) Chlorobium chlorochromatii CaD3 3747723 YP_378480.1 CDS Cag_0159 NC_007514.1 179744 180235 D hypothetical protein 179744..180235 Chlorobium chlorochromatii CaD3 3747724 YP_378481.1 CDS Cag_0160 NC_007514.1 180237 181553 D TPR repeat-containing protein 180237..181553 Chlorobium chlorochromatii CaD3 3747725 YP_378482.1 CDS Cag_0161 NC_007514.1 181614 182417 D extragenic suppressor protein SuhB 181614..182417 Chlorobium chlorochromatii CaD3 3747726 YP_378483.1 CDS Cag_0162 NC_007514.1 182612 184015 D catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase 182612..184015 Chlorobium chlorochromatii CaD3 3747727 YP_378484.1 CDS Cag_0163 NC_007514.1 184548 185102 R CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(184548..185102) Chlorobium chlorochromatii CaD3 3747728 YP_378485.1 CDS Cag_0164 NC_007514.1 185205 185783 R crossover junction endodeoxyribonuclease RuvC complement(185205..185783) Chlorobium chlorochromatii CaD3 3747729 YP_378486.2 CDS Cag_0165 NC_007514.1 185792 186544 R hypothetical protein complement(185792..186544) Chlorobium chlorochromatii CaD3 3747730 YP_378487.1 CDS Cag_0166 NC_007514.1 186875 188113 D transcriptional regulator 186875..188113 Chlorobium chlorochromatii CaD3 3747731 YP_378488.1 CDS Cag_0167 NC_007514.1 188169 188846 R isoprenoid biosynthesis protein with amidotransferase-like domain complement(188169..188846) Chlorobium chlorochromatii CaD3 3747732 YP_378489.1 CDS Cag_0168 NC_007514.1 188945 189487 D isochorismatase superfamily hydrolase 188945..189487 Chlorobium chlorochromatii CaD3 3747733 YP_378490.1 CDS Cag_0169 NC_007514.1 189581 190696 R tetraacyldisaccharide-1-P 4'-kinase complement(189581..190696) Chlorobium chlorochromatii CaD3 3747734 YP_378491.1 CDS Cag_0170 NC_007514.1 190689 191300 R hypothetical protein complement(190689..191300) Chlorobium chlorochromatii CaD3 3747735 YP_378492.1 CDS Cag_0171 NC_007514.1 191587 192873 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 191587..192873 Chlorobium chlorochromatii CaD3 3747697 YP_378493.1 CDS Cag_0172 NC_007514.1 192870 193304 D hypothetical protein 192870..193304 Chlorobium chlorochromatii CaD3 3747698 YP_378494.1 CDS Cag_0173 NC_007514.1 193438 194916 D carbamoyl-phosphate synthase, medium subunit 193438..194916 Chlorobium chlorochromatii CaD3 3747699 YP_378495.1 CDS trpC NC_007514.1 194938 195711 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 194938..195711 Chlorobium chlorochromatii CaD3 3747700 YP_378496.1 CDS Cag_0175 NC_007514.1 195698 196354 R ribulose-phosphate 3-epimerase complement(195698..196354) Chlorobium chlorochromatii CaD3 3747701 YP_378497.1 CDS Cag_0176 NC_007514.1 196403 198628 R hypothetical protein complement(196403..198628) Chlorobium chlorochromatii CaD3 3747702 YP_378498.1 CDS Cag_0177 NC_007514.1 198728 198955 R hypothetical protein complement(198728..198955) Chlorobium chlorochromatii CaD3 3747703 YP_378499.1 CDS Cag_0178 NC_007514.1 198984 199949 R hypothetical protein complement(198984..199949) Chlorobium chlorochromatii CaD3 3747704 YP_378500.1 CDS Cag_0179 NC_007514.1 200023 202797 R DNA polymerase A complement(200023..202797) Chlorobium chlorochromatii CaD3 3747705 YP_378501.1 CDS Cag_0180 NC_007514.1 202983 203834 R prephenate dehydratase complement(202983..203834) Chlorobium chlorochromatii CaD3 3747706 YP_378502.1 CDS Cag_0181 NC_007514.1 203930 204532 R hypothetical protein complement(203930..204532) Chlorobium chlorochromatii CaD3 3747707 YP_378503.1 CDS Cag_0182 NC_007514.1 204766 205824 R Fic family protein complement(204766..205824) Chlorobium chlorochromatii CaD3 3747708 YP_378504.1 CDS clpX NC_007514.1 206164 207495 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(206164..207495) Chlorobium chlorochromatii CaD3 3747709 YP_378505.1 CDS Cag_0184 NC_007514.1 207619 207891 R hypothetical protein complement(207619..207891) Chlorobium chlorochromatii CaD3 3747710 YP_378506.1 CDS gltD NC_007514.1 207912 209387 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(207912..209387) Chlorobium chlorochromatii CaD3 3747711 YP_378507.1 CDS Cag_0186 NC_007514.1 209408 214009 R glutamate synthase, large subunit complement(209408..214009) Chlorobium chlorochromatii CaD3 3747712 YP_378508.1 CDS gpmA NC_007514.1 214160 214903 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(214160..214903) Chlorobium chlorochromatii CaD3 3747713 YP_378509.1 CDS Cag_0188 NC_007514.1 215376 216629 D hypothetical protein 215376..216629 Chlorobium chlorochromatii CaD3 3747714 YP_378510.1 CDS Cag_0189 NC_007514.1 216759 217760 D hypothetical protein 216759..217760 Chlorobium chlorochromatii CaD3 3747715 YP_378511.1 CDS Cag_0190 NC_007514.1 217771 218232 R cytosine deaminase complement(217771..218232) Chlorobium chlorochromatii CaD3 3747716 YP_378512.1 CDS Cag_0191 NC_007514.1 218518 218745 D chlorosome envelope protein B 218518..218745 Chlorobium chlorochromatii CaD3 3746678 YP_378513.1 CDS Cag_0192 NC_007514.1 218900 219934 D hypothetical protein 218900..219934 Chlorobium chlorochromatii CaD3 3746679 YP_378514.1 CDS Cag_0193 NC_007514.1 219931 220878 D mannose-1-phosphate guanylyltransferase 219931..220878 Chlorobium chlorochromatii CaD3 3746680 YP_378515.1 CDS Cag_0194 NC_007514.1 220889 222049 D hypothetical protein 220889..222049 Chlorobium chlorochromatii CaD3 3746681 YP_378516.1 CDS Cag_0195 NC_007514.1 222055 223461 D sodium:solute symporter family protein 222055..223461 Chlorobium chlorochromatii CaD3 3746682 YP_378517.1 CDS Cag_0196 NC_007514.1 223481 224032 R hypothetical protein complement(223481..224032) Chlorobium chlorochromatii CaD3 3746683 YP_378518.1 CDS Cag_0197 NC_007514.1 224255 226897 D hypothetical protein 224255..226897 Chlorobium chlorochromatii CaD3 3746684 YP_378519.1 CDS Cag_0198 NC_007514.1 226904 227701 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 226904..227701 Chlorobium chlorochromatii CaD3 3746685 YP_378520.1 CDS Cag_0199 NC_007514.1 227719 228699 D glucokinase 227719..228699 Chlorobium chlorochromatii CaD3 3746686 YP_378521.1 CDS Cag_0200 NC_007514.1 228792 229601 D competence protein 228792..229601 Chlorobium chlorochromatii CaD3 3746687 YP_378522.1 CDS Cag_0201 NC_007514.1 229604 230347 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 229604..230347 Chlorobium chlorochromatii CaD3 3746688 YP_378523.1 CDS Cag_0202 NC_007514.1 230436 231671 D transposase 230436..231671 Chlorobium chlorochromatii CaD3 3746689 YP_378524.1 CDS Cag_0203 NC_007514.1 231802 232890 D hypothetical protein 231802..232890 Chlorobium chlorochromatii CaD3 3746690 YP_378525.1 CDS Cag_0204 NC_007514.1 232987 233409 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(232987..233409) Chlorobium chlorochromatii CaD3 3746691 YP_378526.1 CDS Cag_0205 NC_007514.1 233768 234214 R bacterioferritin comigratory protein, thiol peroxidase complement(233768..234214) Chlorobium chlorochromatii CaD3 3746692 YP_378527.1 CDS Cag_0206 NC_007514.1 234586 235779 D IscS protein 234586..235779 Chlorobium chlorochromatii CaD3 3746693 YP_378528.1 CDS Cag_0207 NC_007514.1 235763 236374 D IscU protein 235763..236374 Chlorobium chlorochromatii CaD3 3746694 YP_378529.1 CDS Cag_0208 NC_007514.1 236460 237809 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 236460..237809 Chlorobium chlorochromatii CaD3 3746695 YP_378530.1 CDS Cag_0209 NC_007514.1 238027 239031 D catalyzes the synthesis of bacteriochlorophyll c which is the primary pigment in the chlorosomes of the photosynthetic green bacteria; bacteriochlorophyll c synthase 238027..239031 Chlorobium chlorochromatii CaD3 3746696 YP_378531.1 CDS Cag_0210 NC_007514.1 239132 239860 D hypothetical protein 239132..239860 Chlorobium chlorochromatii CaD3 3747798 YP_378532.1 CDS hisG NC_007514.1 239900 240784 D long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 239900..240784 Chlorobium chlorochromatii CaD3 3747799 YP_378533.1 CDS Cag_0212 NC_007514.1 240892 242040 D glycosyl transferase 240892..242040 Chlorobium chlorochromatii CaD3 3747800 YP_378534.1 CDS Cag_0213 NC_007514.1 242187 243137 D hypothetical protein 242187..243137 Chlorobium chlorochromatii CaD3 3747801 YP_378535.1 CDS Cag_0214 NC_007514.1 243397 243606 D cold-shock DNA-binding domain-containing protein 243397..243606 Chlorobium chlorochromatii CaD3 3747802 YP_378536.1 CDS Cag_0215 NC_007514.1 243712 244602 D hypothetical protein 243712..244602 Chlorobium chlorochromatii CaD3 3747803 YP_378537.1 CDS Cag_0216 NC_007514.1 244724 245920 R response regulator receiver domain-containing protein complement(244724..245920) Chlorobium chlorochromatii CaD3 3747804 YP_378538.1 CDS Cag_0217 NC_007514.1 246309 247466 R anion-transporting ATPase complement(246309..247466) Chlorobium chlorochromatii CaD3 3747805 YP_378539.1 CDS Cag_0218 NC_007514.1 247545 248897 R hypothetical protein complement(247545..248897) Chlorobium chlorochromatii CaD3 3747806 YP_378540.1 CDS Cag_0219 NC_007514.1 249124 249366 R chlorosome envelope protein A complement(249124..249366) Chlorobium chlorochromatii CaD3 3747807 YP_378541.1 CDS Cag_0220 NC_007514.1 249517 249966 R chlorosome envelope protein C complement(249517..249966) Chlorobium chlorochromatii CaD3 3747808 YP_378542.1 CDS Cag_0221 NC_007514.1 250060 251286 R anion-transporting ATPase complement(250060..251286) Chlorobium chlorochromatii CaD3 3747809 YP_378543.1 CDS Cag_0222 NC_007514.1 251539 252363 D dihydroorotate dehydrogenase, electron transfer subunit 251539..252363 Chlorobium chlorochromatii CaD3 3747810 YP_378544.1 CDS Cag_0223 NC_007514.1 252467 252985 D single-strand binding protein 252467..252985 Chlorobium chlorochromatii CaD3 3747811 YP_378545.1 CDS Cag_0224 NC_007514.1 253059 254099 D DNA polymerase III subunit delta 253059..254099 Chlorobium chlorochromatii CaD3 3747812 YP_378546.1 CDS Cag_0225 NC_007514.1 254138 255130 R NAD-dependent epimerase/dehydratase complement(254138..255130) Chlorobium chlorochromatii CaD3 3747813 YP_378547.1 CDS Cag_0226 NC_007514.1 255377 256582 D 8-amino-7-oxononanoate synthase 255377..256582 Chlorobium chlorochromatii CaD3 3747814 YP_378548.1 CDS Cag_0227 NC_007514.1 257107 260907 D magnesium-chelatase, subunit H 257107..260907 Chlorobium chlorochromatii CaD3 3747815 YP_378549.1 CDS Cag_0228 NC_007514.1 261208 261906 D catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 261208..261906 Chlorobium chlorochromatii CaD3 3747816 YP_378550.1 CDS Cag_0229 NC_007514.1 262156 263799 D magnesium-protoporphyrin IX monomethyl ester cyclase 262156..263799 Chlorobium chlorochromatii CaD3 3747817 YP_378551.1 CDS Cag_0230 NC_007514.1 263926 264432 R 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase complement(263926..264432) Chlorobium chlorochromatii CaD3 3747892 YP_378552.1 CDS Cag_0233 NC_007514.1 265541 265921 R dihydroneopterin aldolase complement(265541..265921) Chlorobium chlorochromatii CaD3 3747893 YP_378553.1 CDS Cag_0234 NC_007514.1 266236 267114 D nicotinate-nucleotide pyrophosphorylase 266236..267114 Chlorobium chlorochromatii CaD3 3747894 YP_378554.1 CDS acpS NC_007514.1 267121 267477 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 267121..267477 Chlorobium chlorochromatii CaD3 3747895 YP_378555.1 CDS Cag_0236 NC_007514.1 267525 267899 R XRE family transcriptional regulator complement(267525..267899) Chlorobium chlorochromatii CaD3 3747896 YP_378556.1 CDS Cag_0237 NC_007514.1 267915 268283 R killer suppression protein HigA complement(267915..268283) Chlorobium chlorochromatii CaD3 3747897 YP_378557.1 CDS Cag_0238 NC_007514.1 268432 269754 R trigger factor complement(268432..269754) Chlorobium chlorochromatii CaD3 3747898 YP_378558.1 CDS Cag_0239 NC_007514.1 269986 271245 R M16 family peptidase complement(269986..271245) Chlorobium chlorochromatii CaD3 3747899 YP_378559.1 CDS Cag_0240 NC_007514.1 271394 272383 D dihydroflavonol 4-reductase 271394..272383 Chlorobium chlorochromatii CaD3 3747900 YP_378560.1 CDS recA NC_007514.1 272459 273520 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 272459..273520 Chlorobium chlorochromatii CaD3 3747901 YP_378561.1 CDS Cag_0242 NC_007514.1 273517 274563 D dihydrouridine synthase TIM-barrel protein nifR3 273517..274563 Chlorobium chlorochromatii CaD3 3747902 YP_378562.1 CDS Cag_0243 NC_007514.1 274576 275634 R ABC transporter substrate-binding protein complement(274576..275634) Chlorobium chlorochromatii CaD3 3747903 YP_378563.1 CDS Cag_0244 NC_007514.1 275813 276556 D hydrogenase/sulfur reductase subunit delta 275813..276556 Chlorobium chlorochromatii CaD3 3747904 YP_378564.1 CDS Cag_0245 NC_007514.1 276553 277833 D hydrogenase/sulfur reductase subunit alpha 276553..277833 Chlorobium chlorochromatii CaD3 3747905 YP_378565.1 CDS Cag_0246 NC_007514.1 277904 278332 R FKBP-type peptidylprolyl isomerase complement(277904..278332) Chlorobium chlorochromatii CaD3 3747906 YP_378566.1 CDS Cag_0247 NC_007514.1 278397 279482 R hypothetical protein complement(278397..279482) Chlorobium chlorochromatii CaD3 3747907 YP_378567.1 CDS Cag_0248 NC_007514.1 279486 280682 R protoporphyrinogen oxidase complement(279486..280682) Chlorobium chlorochromatii CaD3 3747908 YP_378568.1 CDS Cag_0249 NC_007514.1 280793 281326 R acetyltransferase complement(280793..281326) Chlorobium chlorochromatii CaD3 3747909 YP_378569.1 CDS Cag_0250 NC_007514.1 281562 281825 D chlorosome envelope protein E 281562..281825 Chlorobium chlorochromatii CaD3 3747910 YP_378570.1 CDS Cag_0251 NC_007514.1 281917 282651 D ATPase 281917..282651 Chlorobium chlorochromatii CaD3 3748171 YP_378571.1 CDS Cag_0252 NC_007514.1 282719 283624 D hypothetical protein 282719..283624 Chlorobium chlorochromatii CaD3 3748172 YP_378572.1 CDS Cag_0253 NC_007514.1 283567 284181 R hypothetical protein complement(283567..284181) Chlorobium chlorochromatii CaD3 3748173 YP_378573.1 CDS mnmA NC_007514.1 284409 285488 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(284409..285488) Chlorobium chlorochromatii CaD3 3748174 YP_378574.1 CDS Cag_0255 NC_007514.1 285599 286561 D (Fe-S)-binding protein 285599..286561 Chlorobium chlorochromatii CaD3 3748176 YP_378575.1 CDS Cag_0256 NC_007514.1 286558 287061 R hypothetical protein complement(286558..287061) Chlorobium chlorochromatii CaD3 3748177 YP_378576.1 CDS Cag_0257 NC_007514.1 287058 288269 R ATPase complement(287058..288269) Chlorobium chlorochromatii CaD3 3748178 YP_378577.1 CDS purH NC_007514.1 288300 289874 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(288300..289874) Chlorobium chlorochromatii CaD3 3748179 YP_378578.1 CDS Cag_0259 NC_007514.1 290002 290742 D 3-oxoacyl-ACP reductase 290002..290742 Chlorobium chlorochromatii CaD3 3748180 YP_378579.1 CDS Cag_0260 NC_007514.1 290790 291113 D hypothetical protein 290790..291113 Chlorobium chlorochromatii CaD3 3748181 YP_378580.1 CDS Cag_0261 NC_007514.1 291140 291538 D hypothetical protein 291140..291538 Chlorobium chlorochromatii CaD3 3748182 YP_378581.1 CDS Cag_0262 NC_007514.1 291522 291911 D hypothetical protein 291522..291911 Chlorobium chlorochromatii CaD3 3748183 YP_378582.1 CDS Cag_0263 NC_007514.1 292007 295441 D alpha amylase 292007..295441 Chlorobium chlorochromatii CaD3 3748184 YP_378583.1 CDS Cag_0264 NC_007514.1 295819 296559 D ATPase 295819..296559 Chlorobium chlorochromatii CaD3 3748185 YP_378584.1 CDS Cag_0265 NC_007514.1 296733 298262 D hypothetical protein 296733..298262 Chlorobium chlorochromatii CaD3 3748186 YP_378585.1 CDS Cag_0266 NC_007514.1 298405 298830 D hypothetical protein 298405..298830 Chlorobium chlorochromatii CaD3 3748187 YP_378586.1 CDS Cag_0267 NC_007514.1 298827 299063 D hypothetical protein 298827..299063 Chlorobium chlorochromatii CaD3 3748188 YP_378587.1 CDS Cag_0268 NC_007514.1 299060 299263 D hypothetical protein 299060..299263 Chlorobium chlorochromatii CaD3 3748189 YP_378588.1 CDS Cag_0269 NC_007514.1 299524 300063 D hypothetical protein 299524..300063 Chlorobium chlorochromatii CaD3 3748152 YP_378589.1 CDS Cag_0270 NC_007514.1 300175 300441 D hypothetical protein 300175..300441 Chlorobium chlorochromatii CaD3 3748153 YP_378590.1 CDS Cag_0271 NC_007514.1 300452 300718 D hypothetical protein 300452..300718 Chlorobium chlorochromatii CaD3 3748154 YP_378591.1 CDS Cag_0272 NC_007514.1 300864 301283 R hypothetical protein complement(300864..301283) Chlorobium chlorochromatii CaD3 3748155 YP_378592.1 CDS Cag_0273 NC_007514.1 301311 301610 R hypothetical protein complement(301311..301610) Chlorobium chlorochromatii CaD3 3748156 YP_378593.1 CDS Cag_0274 NC_007514.1 301607 301843 R hypothetical protein complement(301607..301843) Chlorobium chlorochromatii CaD3 3748157 YP_378594.1 CDS Cag_0275 NC_007514.1 302186 304189 D NAD-dependent DNA ligase 302186..304189 Chlorobium chlorochromatii CaD3 3748158 YP_378595.1 CDS Cag_0276 NC_007514.1 304195 304572 D hypothetical protein 304195..304572 Chlorobium chlorochromatii CaD3 3748159 YP_378596.1 CDS Cag_0277 NC_007514.1 304949 305764 D Sel1 repeat-containing protein 304949..305764 Chlorobium chlorochromatii CaD3 3748160 YP_378597.1 CDS Cag_0278 NC_007514.1 305881 306573 D hypothetical protein 305881..306573 Chlorobium chlorochromatii CaD3 3748161 YP_378598.1 CDS Cag_0279 NC_007514.1 306808 307011 D hypothetical protein 306808..307011 Chlorobium chlorochromatii CaD3 3748162 YP_378599.1 CDS Cag_0280 NC_007514.1 307014 307400 D hypothetical protein 307014..307400 Chlorobium chlorochromatii CaD3 3748163 YP_378600.1 CDS Cag_0281 NC_007514.1 307448 307759 D hypothetical protein 307448..307759 Chlorobium chlorochromatii CaD3 3748164 YP_378601.1 CDS Cag_0282 NC_007514.1 307958 308974 D aspartate-semialdehyde dehydrogenase 307958..308974 Chlorobium chlorochromatii CaD3 3748165 YP_378602.1 CDS Cag_0283 NC_007514.1 309615 309938 R SugE protein complement(309615..309938) Chlorobium chlorochromatii CaD3 3748166 YP_378603.1 CDS Cag_0284 NC_007514.1 309943 311076 R Gfo/Idh/MocA family oxidoreductase complement(309943..311076) Chlorobium chlorochromatii CaD3 3748167 YP_378604.1 CDS Cag_0285 NC_007514.1 311173 312600 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(311173..312600) Chlorobium chlorochromatii CaD3 3748168 YP_378605.1 CDS Cag_0286 NC_007514.1 312746 313255 D 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 312746..313255 Chlorobium chlorochromatii CaD3 3748169 YP_378606.1 CDS Cag_0287 NC_007514.1 313248 313778 D hypothetical protein 313248..313778 Chlorobium chlorochromatii CaD3 3748170 YP_378607.1 CDS Cag_0288 NC_007514.1 313860 315188 D NADH dehydrogenase 313860..315188 Chlorobium chlorochromatii CaD3 3748117 YP_378608.1 CDS Cag_0289 NC_007514.1 315655 316494 R Acetyl-CoA carboxylase carboxyl transferase subunit beta complement(315655..316494) Chlorobium chlorochromatii CaD3 3748118 YP_378609.1 CDS Cag_0290 NC_007514.1 316631 319576 D hypothetical protein 316631..319576 Chlorobium chlorochromatii CaD3 3748119 YP_378610.1 CDS Cag_0291 NC_007514.1 319644 320462 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 319644..320462 Chlorobium chlorochromatii CaD3 3748120 YP_378611.1 CDS Cag_0292 NC_007514.1 320467 322164 D hypothetical protein 320467..322164 Chlorobium chlorochromatii CaD3 3748121 YP_378612.1 CDS Cag_0293 NC_007514.1 322277 323362 R cytoplasmic protein complement(322277..323362) Chlorobium chlorochromatii CaD3 3748122 YP_378613.1 CDS Cag_0294 NC_007514.1 323822 324835 R hypothetical protein complement(323822..324835) Chlorobium chlorochromatii CaD3 3748123 YP_378614.1 CDS Cag_0295 NC_007514.1 325140 325520 R transcriptional regulator-like complement(325140..325520) Chlorobium chlorochromatii CaD3 3748124 YP_378615.1 CDS Cag_0296 NC_007514.1 325757 326173 D hypothetical protein 325757..326173 Chlorobium chlorochromatii CaD3 3748125 YP_378616.1 CDS Cag_0297 NC_007514.1 326246 326968 R hypothetical protein complement(326246..326968) Chlorobium chlorochromatii CaD3 3748126 YP_378617.1 CDS Cag_0298 NC_007514.1 326981 327544 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(326981..327544) Chlorobium chlorochromatii CaD3 3748127 YP_378618.1 CDS Cag_0299 NC_007514.1 327558 328805 R hypothetical protein complement(327558..328805) Chlorobium chlorochromatii CaD3 3748128 YP_378619.1 CDS Cag_0300 NC_007514.1 329102 329512 D hypothetical protein 329102..329512 Chlorobium chlorochromatii CaD3 3748129 YP_378620.1 CDS Cag_0301 NC_007514.1 329598 335081 R TPR repeat-containing protein complement(329598..335081) Chlorobium chlorochromatii CaD3 3748130 YP_378621.1 CDS Cag_0302 NC_007514.1 335085 336164 R hypothetical protein complement(335085..336164) Chlorobium chlorochromatii CaD3 3748100 YP_378622.1 CDS Cag_0303 NC_007514.1 336183 339134 R M16 family peptidase complement(336183..339134) Chlorobium chlorochromatii CaD3 3748101 YP_378623.1 CDS Cag_0304 NC_007514.1 340173 340391 D hypothetical protein 340173..340391 Chlorobium chlorochromatii CaD3 3748102 YP_378624.1 CDS Cag_0305 NC_007514.1 340391 340558 D hypothetical protein 340391..340558 Chlorobium chlorochromatii CaD3 3748103 YP_378625.1 CDS Cag_0308 NC_007514.1 342239 344158 D hypothetical protein 342239..344158 Chlorobium chlorochromatii CaD3 3748104 YP_378626.1 CDS Cag_0309 NC_007514.1 344369 345547 D hypothetical protein 344369..345547 Chlorobium chlorochromatii CaD3 3748105 YP_378627.1 CDS Cag_0310 NC_007514.1 345544 346056 D hypothetical protein 345544..346056 Chlorobium chlorochromatii CaD3 3748106 YP_378628.1 CDS Cag_0311 NC_007514.1 346240 348126 D hypothetical protein 346240..348126 Chlorobium chlorochromatii CaD3 3748107 YP_378629.1 CDS Cag_0312 NC_007514.1 348349 348609 D hypothetical protein 348349..348609 Chlorobium chlorochromatii CaD3 3748108 YP_378630.1 CDS Cag_0314 NC_007514.1 349424 351469 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 349424..351469 Chlorobium chlorochromatii CaD3 3748109 YP_378631.1 CDS Cag_0315 NC_007514.1 351688 352029 D hypothetical protein 351688..352029 Chlorobium chlorochromatii CaD3 3748110 YP_378632.1 CDS Cag_0316 NC_007514.1 352031 352825 D hypothetical protein 352031..352825 Chlorobium chlorochromatii CaD3 3748111 YP_378633.1 CDS Cag_0317 NC_007514.1 353279 354622 D citrate synthase I 353279..354622 Chlorobium chlorochromatii CaD3 3748112 YP_378634.1 CDS gatC NC_007514.1 354786 355073 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 354786..355073 Chlorobium chlorochromatii CaD3 3748113 YP_378635.1 CDS Cag_0319 NC_007514.1 355078 355377 D hypothetical protein 355078..355377 Chlorobium chlorochromatii CaD3 3748114 YP_378636.1 CDS Cag_0320 NC_007514.1 355449 356195 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 355449..356195 Chlorobium chlorochromatii CaD3 3748115 YP_378637.1 CDS xseA NC_007514.1 356170 357393 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(356170..357393) Chlorobium chlorochromatii CaD3 3748116 YP_378638.1 CDS Cag_0322 NC_007514.1 357677 358906 D hypothetical protein 357677..358906 Chlorobium chlorochromatii CaD3 3748042 YP_378639.1 CDS Cag_0323 NC_007514.1 360104 361156 D hypothetical protein 360104..361156 Chlorobium chlorochromatii CaD3 3748043 YP_378640.1 CDS Cag_0324 NC_007514.1 361137 362375 D chlorophyllide reductase subunit Y 361137..362375 Chlorobium chlorochromatii CaD3 3748044 YP_378641.1 CDS Cag_0325 NC_007514.1 362432 364141 D hypothetical protein 362432..364141 Chlorobium chlorochromatii CaD3 3748045 YP_378642.1 CDS frr NC_007514.1 364260 364820 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(364260..364820) Chlorobium chlorochromatii CaD3 3748046 YP_378643.1 CDS rpmE NC_007514.1 364870 365082 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(364870..365082) Chlorobium chlorochromatii CaD3 3748047 YP_378644.1 CDS Cag_0328 NC_007514.1 365337 367457 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 365337..367457 Chlorobium chlorochromatii CaD3 3748048 YP_378645.1 CDS Cag_0329 NC_007514.1 367528 368487 D GTPase EngC 367528..368487 Chlorobium chlorochromatii CaD3 3748049 YP_378646.1 CDS Cag_0330 NC_007514.1 368830 370203 D aldehyde dehydrogenase 368830..370203 Chlorobium chlorochromatii CaD3 3748050 YP_378647.1 CDS Cag_0331 NC_007514.1 370233 370637 D hypothetical protein 370233..370637 Chlorobium chlorochromatii CaD3 3748051 YP_378648.1 CDS Cag_0332 NC_007514.1 370767 372359 D type II DNA modification methyltransferase 370767..372359 Chlorobium chlorochromatii CaD3 3748052 YP_378649.1 CDS Cag_0333 NC_007514.1 372668 373450 D type II restriction endonuclease TdeIII 372668..373450 Chlorobium chlorochromatii CaD3 3748053 YP_378650.1 CDS Cag_0334 NC_007514.1 373499 375469 R ATPase complement(373499..375469) Chlorobium chlorochromatii CaD3 3748054 YP_378651.1 CDS Cag_0335 NC_007514.1 375680 376990 D FusA/NodT family protein 375680..376990 Chlorobium chlorochromatii CaD3 3748055 YP_378652.1 CDS Cag_0336 NC_007514.1 376974 377948 D secretion protein HlyD 376974..377948 Chlorobium chlorochromatii CaD3 3748056 YP_378653.1 CDS Cag_0337 NC_007514.1 377945 379918 D ATPase 377945..379918 Chlorobium chlorochromatii CaD3 3748057 YP_378654.1 CDS sucC NC_007514.1 379999 381171 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(379999..381171) Chlorobium chlorochromatii CaD3 3748058 YP_378655.1 CDS Cag_0339 NC_007514.1 381437 382633 R endoglucanase Y-like protein complement(381437..382633) Chlorobium chlorochromatii CaD3 3748059 YP_378656.1 CDS Cag_0340 NC_007514.1 382630 384141 R cell wall biosynthesis glycosyltransferase-like protein complement(382630..384141) Chlorobium chlorochromatii CaD3 3748060 YP_378657.1 CDS Cag_0341 NC_007514.1 384212 386470 R TPR repeat-containing protein complement(384212..386470) Chlorobium chlorochromatii CaD3 3748061 YP_378658.1 CDS dapF NC_007514.1 386816 387628 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(386816..387628) Chlorobium chlorochromatii CaD3 3748024 YP_378659.1 CDS Cag_0343 NC_007514.1 388095 390290 D photosystem P840 reaction center, large subunit 388095..390290 Chlorobium chlorochromatii CaD3 3748025 YP_378660.1 CDS Cag_0344 NC_007514.1 390381 391085 D photosystem P840 reaction center iron-sulfur protein 390381..391085 Chlorobium chlorochromatii CaD3 3748027 YP_378661.1 CDS Cag_0345 NC_007514.1 391238 392038 D dolichol-phosphate mannosyltransferase 391238..392038 Chlorobium chlorochromatii CaD3 3748028 YP_378662.1 CDS Cag_0346 NC_007514.1 392155 394230 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(392155..394230) Chlorobium chlorochromatii CaD3 3748029 YP_378663.1 CDS eno NC_007514.1 394573 395886 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 394573..395886 Chlorobium chlorochromatii CaD3 3748030 YP_378664.1 CDS Cag_0348 NC_007514.1 395978 396298 D hypothetical protein 395978..396298 Chlorobium chlorochromatii CaD3 3748031 YP_378665.1 CDS Cag_0349 NC_007514.1 396365 398431 D IspG protein 396365..398431 Chlorobium chlorochromatii CaD3 3748032 YP_378666.1 CDS Cag_0350 NC_007514.1 398428 399207 D short chain dehydrogenase/reductase oxidoreductase 398428..399207 Chlorobium chlorochromatii CaD3 3748033 YP_378667.1 CDS secE NC_007514.1 399687 399878 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 399687..399878 Chlorobium chlorochromatii CaD3 3748034 YP_378668.1 CDS Cag_0352 NC_007514.1 399902 400477 D NusG antitermination factor 399902..400477 Chlorobium chlorochromatii CaD3 3748035 YP_378669.1 CDS rplK NC_007514.1 400525 400950 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 400525..400950 Chlorobium chlorochromatii CaD3 3748036 YP_378670.1 CDS rplA NC_007514.1 401018 401707 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 401018..401707 Chlorobium chlorochromatii CaD3 3748037 YP_378671.1 CDS rplJ NC_007514.1 401726 402244 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 401726..402244 Chlorobium chlorochromatii CaD3 3748038 YP_378672.1 CDS rplL NC_007514.1 402312 402686 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 402312..402686 Chlorobium chlorochromatii CaD3 3748039 YP_378673.1 CDS rpoB NC_007514.1 403046 406948 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 403046..406948 Chlorobium chlorochromatii CaD3 3748040 YP_378674.1 CDS Cag_0358 NC_007514.1 407046 411554 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 407046..411554 Chlorobium chlorochromatii CaD3 3748041 YP_378675.1 CDS Cag_0359 NC_007514.1 411656 412999 R Acetyl-CoA carboxylase, biotin carboxylase complement(411656..412999) Chlorobium chlorochromatii CaD3 3748004 YP_378676.1 CDS Cag_0360 NC_007514.1 413017 413490 R Acetyl-CoA biotin carboxyl carrier complement(413017..413490) Chlorobium chlorochromatii CaD3 3748005 YP_378677.1 CDS Cag_0361 NC_007514.1 413551 414117 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(413551..414117) Chlorobium chlorochromatii CaD3 3748006 YP_378678.1 CDS Cag_0362 NC_007514.1 414466 414741 D histone-like DNA-binding protein 414466..414741 Chlorobium chlorochromatii CaD3 3748007 YP_378679.1 CDS Cag_0363 NC_007514.1 414830 415834 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 414830..415834 Chlorobium chlorochromatii CaD3 3748008 YP_378680.1 CDS Cag_0364 NC_007514.1 416121 419003 D signal transduction protein 416121..419003 Chlorobium chlorochromatii CaD3 3748009 YP_378681.1 CDS Cag_0365 NC_007514.1 419388 420416 R catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta complement(419388..420416) Chlorobium chlorochromatii CaD3 3748010 YP_378682.1 CDS Cag_0366 NC_007514.1 420420 422306 R 2-oxoglutarate ferredoxin oxidoreductase subunit alpha complement(420420..422306) Chlorobium chlorochromatii CaD3 3748011 YP_378683.1 CDS Cag_0367 NC_007514.1 422821 423096 R hypothetical protein complement(422821..423096) Chlorobium chlorochromatii CaD3 3748012 YP_378684.1 CDS Cag_0368 NC_007514.1 423147 424010 R hypothetical protein complement(423147..424010) Chlorobium chlorochromatii CaD3 3748013 YP_378685.1 CDS alaS NC_007514.1 424216 426876 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 424216..426876 Chlorobium chlorochromatii CaD3 3748014 YP_378686.1 CDS Cag_0370 NC_007514.1 426976 427302 D ferredoxin, 4Fe-4S 426976..427302 Chlorobium chlorochromatii CaD3 3748015 YP_378687.1 CDS Cag_0371 NC_007514.1 427343 428611 D ABC transporter, integral membrane protein 427343..428611 Chlorobium chlorochromatii CaD3 3748016 YP_378688.1 CDS folE NC_007514.1 428716 429387 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(428716..429387) Chlorobium chlorochromatii CaD3 3748017 YP_378689.1 CDS Cag_0373 NC_007514.1 429347 429793 R 6-pyruvoyl tetrahydrobiopterin synthase complement(429347..429793) Chlorobium chlorochromatii CaD3 3748018 YP_378690.1 CDS Cag_0374 NC_007514.1 429803 430282 R hypothetical protein complement(429803..430282) Chlorobium chlorochromatii CaD3 3748019 YP_378691.1 CDS Cag_0375 NC_007514.1 430440 432335 D ATPase 430440..432335 Chlorobium chlorochromatii CaD3 3748020 YP_378692.1 CDS Cag_0376 NC_007514.1 432649 433185 R hypothetical protein complement(432649..433185) Chlorobium chlorochromatii CaD3 3748021 YP_378693.1 CDS Cag_0377 NC_007514.1 433195 433866 R hypothetical protein complement(433195..433866) Chlorobium chlorochromatii CaD3 3748022 YP_378694.1 CDS Cag_0378 NC_007514.1 434114 435541 R helicase complement(434114..435541) Chlorobium chlorochromatii CaD3 3748023 YP_378695.1 CDS Cag_0379 NC_007514.1 435543 436577 R hypothetical protein complement(435543..436577) Chlorobium chlorochromatii CaD3 3747547 YP_378696.1 CDS Cag_0380 NC_007514.1 436570 440475 R DEAD/DEAH box helicase-like protein complement(436570..440475) Chlorobium chlorochromatii CaD3 3747548 YP_378697.1 CDS Cag_0381 NC_007514.1 440734 441009 R XRE family transcriptional regulator complement(440734..441009) Chlorobium chlorochromatii CaD3 3747549 YP_378698.1 CDS Cag_0382 NC_007514.1 441231 442826 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(441231..442826) Chlorobium chlorochromatii CaD3 3747550 YP_378699.1 CDS Cag_0383 NC_007514.1 443051 443971 D short chain dehydrogenase/reductase oxidoreductase 443051..443971 Chlorobium chlorochromatii CaD3 3747551 YP_378700.1 CDS Cag_0384 NC_007514.1 444104 444979 D hypothetical protein 444104..444979 Chlorobium chlorochromatii CaD3 3747552 YP_378701.1 CDS Cag_0385 NC_007514.1 445043 445513 D hypothetical protein 445043..445513 Chlorobium chlorochromatii CaD3 3747553 YP_378702.1 CDS Cag_0386 NC_007514.1 445775 447976 R heme catalase/peroxidase complement(445775..447976) Chlorobium chlorochromatii CaD3 3747554 YP_378703.1 CDS Cag_0387 NC_007514.1 448296 449195 R RNA polymerase sigma factor rpoD (sigma-A) complement(448296..449195) Chlorobium chlorochromatii CaD3 3747555 YP_378704.1 CDS valS NC_007514.1 449392 452100 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(449392..452100) Chlorobium chlorochromatii CaD3 3747556 YP_378705.1 CDS Cag_0389 NC_007514.1 452131 452808 R peptidase S14, ClpP complement(452131..452808) Chlorobium chlorochromatii CaD3 3747557 YP_378706.1 CDS thyX NC_007514.1 453033 453701 D flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 453033..453701 Chlorobium chlorochromatii CaD3 3747558 YP_378707.1 CDS Cag_0391 NC_007514.1 453655 455643 R peptidase M41, FtsH complement(453655..455643) Chlorobium chlorochromatii CaD3 3747559 YP_378708.1 CDS gltX NC_007514.1 456112 457620 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 456112..457620 Chlorobium chlorochromatii CaD3 3747560 YP_378709.1 CDS Cag_0393 NC_007514.1 457978 459099 D hydroxyneurosporene synthase CrtC 457978..459099 Chlorobium chlorochromatii CaD3 3747561 YP_378710.1 CDS Cag_0394 NC_007514.1 459410 459955 D cytochrome b6-f complex, iron-sulfur subunit 459410..459955 Chlorobium chlorochromatii CaD3 3747562 YP_378711.1 CDS Cag_0395 NC_007514.1 459991 461271 D cytochrome b-c complex, cytochrome b subunit 459991..461271 Chlorobium chlorochromatii CaD3 3747563 YP_378712.1 CDS Cag_0396 NC_007514.1 461634 462176 D hypothetical protein 461634..462176 Chlorobium chlorochromatii CaD3 3747564 YP_378713.1 CDS Cag_0397 NC_007514.1 462279 462707 R protein tyrosine phosphatase complement(462279..462707) Chlorobium chlorochromatii CaD3 3747565 YP_378714.1 CDS Cag_0398 NC_007514.1 462881 463915 R hypothetical protein complement(462881..463915) Chlorobium chlorochromatii CaD3 3747776 YP_378715.1 CDS Cag_0399 NC_007514.1 463906 464202 R redox-active disulfide protein 2 complement(463906..464202) Chlorobium chlorochromatii CaD3 3747777 YP_378716.1 CDS Cag_0400 NC_007514.1 464414 465523 R chlorophyllide reductase iron protein subunit X complement(464414..465523) Chlorobium chlorochromatii CaD3 3747778 YP_378717.1 CDS Cag_0401 NC_007514.1 465941 466939 R 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide complement(465941..466939) Chlorobium chlorochromatii CaD3 3747779 YP_378718.1 CDS Cag_0402 NC_007514.1 467024 467497 R 2-vinyl bacteriochlorophyllide hydratase complement(467024..467497) Chlorobium chlorochromatii CaD3 3747780 YP_378719.1 CDS Cag_0403 NC_007514.1 468043 469044 D hypothetical protein 468043..469044 Chlorobium chlorochromatii CaD3 3747781 YP_378720.1 CDS Cag_0404 NC_007514.1 469051 470739 R peptide ABC transporter substrate-binding protein complement(469051..470739) Chlorobium chlorochromatii CaD3 3747782 YP_378721.1 CDS Cag_0405 NC_007514.1 471075 472274 R hypothetical protein complement(471075..472274) Chlorobium chlorochromatii CaD3 3747785 YP_378722.1 CDS Cag_0406 NC_007514.1 472535 479083 R alkaline phosphatase complement(472535..479083) Chlorobium chlorochromatii CaD3 3747786 YP_378723.1 CDS Cag_0407 NC_007514.1 479264 479752 D protein tyrosine phosphatase 479264..479752 Chlorobium chlorochromatii CaD3 3747787 YP_378724.1 CDS Cag_0408 NC_007514.1 479958 480935 R sodium/bile acid symporter family protein complement(479958..480935) Chlorobium chlorochromatii CaD3 3747788 YP_378725.1 CDS Cag_0409 NC_007514.1 481339 482655 D phosphoserine phosphatase SerB 481339..482655 Chlorobium chlorochromatii CaD3 3747789 YP_378726.1 CDS Cag_0410 NC_007514.1 482856 483302 D hypothetical protein 482856..483302 Chlorobium chlorochromatii CaD3 3747790 YP_378727.1 CDS Cag_0411 NC_007514.1 483373 484419 D AraC family transcriptional regulator 483373..484419 Chlorobium chlorochromatii CaD3 3747791 YP_378728.1 CDS Cag_0412 NC_007514.1 484595 485443 D molybdenum utilization protein ModD 484595..485443 Chlorobium chlorochromatii CaD3 3747792 YP_378729.1 CDS Cag_0413 NC_007514.1 485464 486213 D molybdenum ABC transporter periplasmic-binding protein 485464..486213 Chlorobium chlorochromatii CaD3 3747793 YP_378730.1 CDS Cag_0414 NC_007514.1 486215 486901 D molybdate ABC transporter permease 486215..486901 Chlorobium chlorochromatii CaD3 3747680 YP_378731.1 CDS Cag_0415 NC_007514.1 486898 487953 D molybdate ABC transporter ATP-binding protein 486898..487953 Chlorobium chlorochromatii CaD3 3747681 YP_378732.1 CDS Cag_0416 NC_007514.1 487980 488606 R endonuclease III/Nth complement(487980..488606) Chlorobium chlorochromatii CaD3 3747682 YP_378733.1 CDS Cag_0417 NC_007514.1 488614 489123 R NusB antitermination factor complement(488614..489123) Chlorobium chlorochromatii CaD3 3747683 YP_378734.1 CDS Cag_0418 NC_007514.1 489147 489839 R HAD superfamily hydrolase complement(489147..489839) Chlorobium chlorochromatii CaD3 3747684 YP_378735.1 CDS Cag_0419 NC_007514.1 489846 493418 R chromosome segregation protein SMC complement(489846..493418) Chlorobium chlorochromatii CaD3 3747685 YP_378736.1 CDS Cag_0420 NC_007514.1 493489 494364 R dihydropteroate synthase complement(493489..494364) Chlorobium chlorochromatii CaD3 3747686 YP_378737.1 CDS Cag_0421 NC_007514.1 494541 494969 R 6-pyruvoyl tetrahydrobiopterin synthase complement(494541..494969) Chlorobium chlorochromatii CaD3 3747687 YP_378738.1 CDS Cag_0422 NC_007514.1 495126 496898 R Para-aminobenzoate synthase, component I complement(495126..496898) Chlorobium chlorochromatii CaD3 3747688 YP_378739.1 CDS Cag_0423 NC_007514.1 497006 498565 R exopolyphosphatase complement(497006..498565) Chlorobium chlorochromatii CaD3 3747689 YP_378740.1 CDS Cag_0424 NC_007514.1 498781 500004 R drug:proton antiporter complement(498781..500004) Chlorobium chlorochromatii CaD3 3747690 YP_378741.1 CDS Cag_0425 NC_007514.1 500194 500577 D ArsR family transcriptional regulator 500194..500577 Chlorobium chlorochromatii CaD3 3747691 YP_378742.1 CDS Cag_0426 NC_007514.1 500926 501159 D hypothetical protein 500926..501159 Chlorobium chlorochromatii CaD3 3747692 YP_378743.1 CDS Cag_0427 NC_007514.1 501166 501783 D hypothetical protein 501166..501783 Chlorobium chlorochromatii CaD3 3747693 YP_378744.1 CDS Cag_0428 NC_007514.1 501983 502225 D transcriptional regulator/antitoxin, MazE 501983..502225 Chlorobium chlorochromatii CaD3 3747696 YP_378745.1 CDS Cag_0429 NC_007514.1 502212 502562 D transcriptional modulator of MazE/toxin, MazF 502212..502562 Chlorobium chlorochromatii CaD3 3748135 YP_378746.1 CDS Cag_0430 NC_007514.1 502684 503802 R hypothetical protein complement(502684..503802) Chlorobium chlorochromatii CaD3 3748136 YP_378747.1 CDS Cag_0431 NC_007514.1 503840 505930 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(503840..505930) Chlorobium chlorochromatii CaD3 3748137 YP_378748.1 CDS Cag_0432 NC_007514.1 505946 506617 R hypothetical protein complement(505946..506617) Chlorobium chlorochromatii CaD3 3748138 YP_378749.1 CDS Cag_0433 NC_007514.1 506964 507509 D PvlArgDC; converts arginine to agmatine and carbon dioxide; has a role in polyamine metabolism; in Methanococcus jannaschii this enzyme self-cleaves at serine-serine bond to form alpha (N-terminal) and beta (C-terminal) subunits; the alpha subunit contains a catalytically active pyruvoyl group; the beta subunit contains the substrate-binding residues; forms homotrimers of the alpha/beta complex; pyruvoyl-dependent arginine decarboxylase 506964..507509 Chlorobium chlorochromatii CaD3 3748139 YP_378750.1 CDS Cag_0434 NC_007514.1 508548 509327 R hypothetical protein complement(508548..509327) Chlorobium chlorochromatii CaD3 3748140 YP_378751.1 CDS Cag_0435 NC_007514.1 509675 510436 D two component transcriptional regulator 509675..510436 Chlorobium chlorochromatii CaD3 3748141 YP_378752.1 CDS Cag_0436 NC_007514.1 510426 512213 D multi-sensor signal transduction histidine kinase 510426..512213 Chlorobium chlorochromatii CaD3 3748142 YP_378753.1 CDS Cag_0437 NC_007514.1 512251 513582 R hypothetical protein complement(512251..513582) Chlorobium chlorochromatii CaD3 3748143 YP_378754.1 CDS Cag_0438 NC_007514.1 513745 514203 D hypothetical protein 513745..514203 Chlorobium chlorochromatii CaD3 3748144 YP_378755.1 CDS Cag_0439 NC_007514.1 514411 515913 R periplasmic sensor signal transduction histidine kinase complement(514411..515913) Chlorobium chlorochromatii CaD3 3748145 YP_378756.1 CDS Cag_0440 NC_007514.1 515910 516587 R two component transcriptional regulator complement(515910..516587) Chlorobium chlorochromatii CaD3 3748146 YP_378757.1 CDS Cag_0441 NC_007514.1 516708 517238 R hypothetical protein complement(516708..517238) Chlorobium chlorochromatii CaD3 3748147 YP_378758.1 CDS Cag_0442 NC_007514.1 517332 518087 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(517332..518087) Chlorobium chlorochromatii CaD3 3748148 YP_378759.1 CDS hppA NC_007514.1 518819 521074 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 518819..521074 Chlorobium chlorochromatii CaD3 3748149 YP_378760.1 CDS Cag_0444 NC_007514.1 521321 521866 D inorganic pyrophosphatase 521321..521866 Chlorobium chlorochromatii CaD3 3748150 YP_378761.1 CDS Cag_0445 NC_007514.1 522293 523588 D hypothetical protein 522293..523588 Chlorobium chlorochromatii CaD3 3748151 YP_378762.1 CDS Cag_0446 NC_007514.1 523786 524052 D hypothetical protein 523786..524052 Chlorobium chlorochromatii CaD3 3747371 YP_378763.1 CDS Cag_0447 NC_007514.1 524280 525518 R hypothetical protein complement(524280..525518) Chlorobium chlorochromatii CaD3 3747372 YP_378764.1 CDS Cag_0448 NC_007514.1 525533 526738 R DegT/DnrJ/EryC1/StrS family protein complement(525533..526738) Chlorobium chlorochromatii CaD3 3747373 YP_378765.1 CDS Cag_0449 NC_007514.1 526796 528280 D L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 526796..528280 Chlorobium chlorochromatii CaD3 3747374 YP_378766.1 CDS Cag_0450 NC_007514.1 528313 528711 D hypothetical protein 528313..528711 Chlorobium chlorochromatii CaD3 3747375 YP_378767.1 CDS Cag_0451 NC_007514.1 529030 530403 D catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 529030..530403 Chlorobium chlorochromatii CaD3 3747376 YP_378768.1 CDS Cag_0452 NC_007514.1 530507 531292 R Fic family protein complement(530507..531292) Chlorobium chlorochromatii CaD3 3747377 YP_378769.1 CDS Cag_0453 NC_007514.1 531318 533162 R ATPase complement(531318..533162) Chlorobium chlorochromatii CaD3 3747378 YP_378770.1 CDS Cag_0454 NC_007514.1 533159 534562 R phosphoglucomutase/phosphomannomutase complement(533159..534562) Chlorobium chlorochromatii CaD3 3747379 YP_378771.1 CDS Cag_0455 NC_007514.1 534879 535082 D hypothetical protein 534879..535082 Chlorobium chlorochromatii CaD3 3747380 YP_378772.1 CDS rpsT NC_007514.1 535338 535619 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 535338..535619 Chlorobium chlorochromatii CaD3 3747381 YP_378773.1 CDS ruvA NC_007514.1 535712 536326 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 535712..536326 Chlorobium chlorochromatii CaD3 3747382 YP_378774.1 CDS Cag_0458 NC_007514.1 536332 537618 D folylpolyglutamate synthetase 536332..537618 Chlorobium chlorochromatii CaD3 3747383 YP_378775.1 CDS rho NC_007514.1 537944 539233 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 537944..539233 Chlorobium chlorochromatii CaD3 3747384 YP_378776.1 CDS Cag_0460 NC_007514.1 539838 540581 D electron transfer flavoprotein beta-subunit (beta-ETF) 539838..540581 Chlorobium chlorochromatii CaD3 3747385 YP_378777.1 CDS Cag_0461 NC_007514.1 540693 541682 D electron transfer flavoprotein alpha-subunit 540693..541682 Chlorobium chlorochromatii CaD3 3747386 YP_378778.1 CDS Cag_0462 NC_007514.1 541825 542433 D hypothetical protein 541825..542433 Chlorobium chlorochromatii CaD3 3747387 YP_378779.1 CDS Cag_0463 NC_007514.1 542549 545125 R surface antigen family protein complement(542549..545125) Chlorobium chlorochromatii CaD3 3747388 YP_378780.1 CDS Cag_0464 NC_007514.1 545212 546069 R di-trans-poly-cis-decaprenylcistransferase complement(545212..546069) Chlorobium chlorochromatii CaD3 3747389 YP_378781.1 CDS gatA NC_007514.1 546260 547684 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 546260..547684 Chlorobium chlorochromatii CaD3 3748190 YP_378782.1 CDS Cag_0466 NC_007514.1 547735 548634 D succinyl-CoA ligase subunit alpha 547735..548634 Chlorobium chlorochromatii CaD3 3748191 YP_378783.1 CDS Cag_0467 NC_007514.1 548723 549709 R KpsF/GutQ complement(548723..549709) Chlorobium chlorochromatii CaD3 3748192 YP_378784.1 CDS Cag_0468 NC_007514.1 549819 550151 D hypothetical protein 549819..550151 Chlorobium chlorochromatii CaD3 3748193 YP_378785.1 CDS Cag_0469 NC_007514.1 550167 551702 D polysaccharide biosynthesis protein 550167..551702 Chlorobium chlorochromatii CaD3 3748194 YP_378786.1 CDS Cag_0470 NC_007514.1 551719 552231 R hypothetical protein complement(551719..552231) Chlorobium chlorochromatii CaD3 3748195 YP_378787.1 CDS Cag_0471 NC_007514.1 552329 552799 R hypothetical protein complement(552329..552799) Chlorobium chlorochromatii CaD3 3748196 YP_378788.1 CDS Cag_0472 NC_007514.1 552867 553226 R hypothetical protein complement(552867..553226) Chlorobium chlorochromatii CaD3 3748197 YP_378789.1 CDS Cag_0473 NC_007514.1 553311 553871 R sigma-24 (FecI-like) complement(553311..553871) Chlorobium chlorochromatii CaD3 3748198 YP_378790.1 CDS Cag_0474 NC_007514.1 554056 555438 R phosphoglucomutase/phosphomannomutase complement(554056..555438) Chlorobium chlorochromatii CaD3 3748199 YP_378791.1 CDS Cag_0475 NC_007514.1 555642 556784 D glycosyl transferase 555642..556784 Chlorobium chlorochromatii CaD3 3748200 YP_378792.1 CDS Cag_0476 NC_007514.1 556816 557190 D hypothetical protein 556816..557190 Chlorobium chlorochromatii CaD3 3748201 YP_378793.1 CDS Cag_0477 NC_007514.1 557120 558277 R D-alanyl-D-alanine carboxypeptidease complement(557120..558277) Chlorobium chlorochromatii CaD3 3748202 YP_378794.1 CDS Cag_0478 NC_007514.1 558290 559168 R VpsC protein complement(558290..559168) Chlorobium chlorochromatii CaD3 3748203 YP_378795.1 CDS Cag_0479 NC_007514.1 559192 559926 R ATPase complement(559192..559926) Chlorobium chlorochromatii CaD3 3748204 YP_378796.1 CDS Cag_0480 NC_007514.1 559930 560724 R ABC transport system permease complement(559930..560724) Chlorobium chlorochromatii CaD3 3748205 YP_378797.1 CDS Cag_0481 NC_007514.1 560773 561633 R phosphoesterase PHP-like protein complement(560773..561633) Chlorobium chlorochromatii CaD3 3748206 YP_378798.1 CDS Cag_0482 NC_007514.1 561719 562567 R phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase complement(561719..562567) Chlorobium chlorochromatii CaD3 3748207 YP_378799.1 CDS Cag_0483 NC_007514.1 562564 563259 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(562564..563259) Chlorobium chlorochromatii CaD3 3746352 YP_378800.1 CDS Cag_0484 NC_007514.1 563334 564041 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(563334..564041) Chlorobium chlorochromatii CaD3 3746353 YP_378801.1 CDS Cag_0485 NC_007514.1 564249 565466 D hypothetical protein 564249..565466 Chlorobium chlorochromatii CaD3 3746354 YP_378802.1 CDS Cag_0486 NC_007514.1 565456 568353 D TPR repeat-containing protein 565456..568353 Chlorobium chlorochromatii CaD3 3746355 YP_378803.1 CDS Cag_0487 NC_007514.1 568475 569419 R methionyl-tRNA formyltransferase complement(568475..569419) Chlorobium chlorochromatii CaD3 3746356 YP_378804.1 CDS Cag_0488 NC_007514.1 569511 570110 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(569511..570110) Chlorobium chlorochromatii CaD3 3746357 YP_378805.1 CDS Cag_0489 NC_007514.1 570869 572362 D IMP dehydrogenase 570869..572362 Chlorobium chlorochromatii CaD3 3746358 YP_378806.1 CDS Cag_0490 NC_007514.1 572581 574398 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 572581..574398 Chlorobium chlorochromatii CaD3 3746359 YP_378807.1 CDS Cag_0491 NC_007514.1 574568 575407 D peptidase S26A, signal peptidase I 574568..575407 Chlorobium chlorochromatii CaD3 3746360 YP_378808.1 CDS Cag_0492 NC_007514.1 575556 575945 R hypothetical protein complement(575556..575945) Chlorobium chlorochromatii CaD3 3746361 YP_378809.1 CDS Cag_0493 NC_007514.1 576139 577626 D anthranilate synthase component I 576139..577626 Chlorobium chlorochromatii CaD3 3746362 YP_378810.1 CDS Cag_0494 NC_007514.1 577652 579172 D peptidase S1C, Do 577652..579172 Chlorobium chlorochromatii CaD3 3746363 YP_378811.1 CDS greA NC_007514.1 579482 579964 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 579482..579964 Chlorobium chlorochromatii CaD3 3746364 YP_378812.1 CDS Cag_0496 NC_007514.1 579979 580203 D hypothetical protein 579979..580203 Chlorobium chlorochromatii CaD3 3746365 YP_378813.1 CDS tpiA NC_007514.1 580210 580968 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 580210..580968 Chlorobium chlorochromatii CaD3 3746366 YP_378814.1 CDS Cag_0498 NC_007514.1 581090 581854 R phosphate ABC transporter permease complement(581090..581854) Chlorobium chlorochromatii CaD3 3746367 YP_378815.1 CDS Cag_0499 NC_007514.1 581888 583078 R phosphate ABC transporter permease complement(581888..583078) Chlorobium chlorochromatii CaD3 3746368 YP_378816.1 CDS Cag_0500 NC_007514.1 583071 584315 R phosphate ABC transporter permease complement(583071..584315) Chlorobium chlorochromatii CaD3 3746369 YP_378817.1 CDS Cag_0501 NC_007514.1 584389 585417 R periplasmic phosphate binding protein complement(584389..585417) Chlorobium chlorochromatii CaD3 3746370 YP_378818.1 CDS Cag_0502 NC_007514.1 585692 585934 R hypothetical protein complement(585692..585934) Chlorobium chlorochromatii CaD3 3746371 YP_378819.1 CDS Cag_0503 NC_007514.1 585934 587130 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(585934..587130) Chlorobium chlorochromatii CaD3 3747836 YP_378820.1 CDS Cag_0504 NC_007514.1 587382 587984 D phosphoribosylglycinamide formyltransferase 587382..587984 Chlorobium chlorochromatii CaD3 3747837 YP_378821.1 CDS Cag_0505 NC_007514.1 587981 588661 D radical activating enzyme 587981..588661 Chlorobium chlorochromatii CaD3 3747838 YP_378822.1 CDS Cag_0506 NC_007514.1 588743 589741 D glycosyl transferase 588743..589741 Chlorobium chlorochromatii CaD3 3747839 YP_378823.1 CDS Cag_0507 NC_007514.1 589877 591721 D hypothetical protein 589877..591721 Chlorobium chlorochromatii CaD3 3747840 YP_378824.1 CDS Cag_0508 NC_007514.1 591743 594178 D Rab family protein 591743..594178 Chlorobium chlorochromatii CaD3 3747841 YP_378825.1 CDS Cag_0509 NC_007514.1 594556 595746 R hypothetical protein complement(594556..595746) Chlorobium chlorochromatii CaD3 3747842 YP_378826.1 CDS Cag_0510 NC_007514.1 595913 596824 R hypothetical protein complement(595913..596824) Chlorobium chlorochromatii CaD3 3747843 YP_378827.1 CDS Cag_0511 NC_007514.1 596824 598278 R metal dependent phosphohydrolase complement(596824..598278) Chlorobium chlorochromatii CaD3 3747844 YP_378828.1 CDS Cag_0512 NC_007514.1 598397 599284 D glucose-1-phosphate thymidylyltransferase, long form 598397..599284 Chlorobium chlorochromatii CaD3 3747845 YP_378829.1 CDS Cag_0513 NC_007514.1 599333 600208 D DNA-binding protein 599333..600208 Chlorobium chlorochromatii CaD3 3747846 YP_378830.1 CDS Cag_0514 NC_007514.1 600247 600840 D dTDP-4-dehydrorhamnose 3,5-epimerase-like protein 600247..600840 Chlorobium chlorochromatii CaD3 3747847 YP_378831.1 CDS Cag_0515 NC_007514.1 600848 601723 D dTDP-4-dehydrorhamnose reductase 600848..601723 Chlorobium chlorochromatii CaD3 3747848 YP_378832.1 CDS Cag_0516 NC_007514.1 601736 602785 D dTDP-glucose 4,6-dehydratase 601736..602785 Chlorobium chlorochromatii CaD3 3747849 YP_378833.1 CDS Cag_0517 NC_007514.1 602924 603901 D UDP-glucose 4-epimerase 602924..603901 Chlorobium chlorochromatii CaD3 3747850 YP_378834.1 CDS Cag_0518 NC_007514.1 604266 605678 D mannose-1-phosphate guanylyltransferase 604266..605678 Chlorobium chlorochromatii CaD3 3747851 YP_378835.1 CDS Cag_0519 NC_007514.1 605937 607121 D hypothetical protein 605937..607121 Chlorobium chlorochromatii CaD3 3747852 YP_378836.1 CDS Cag_0520 NC_007514.1 607200 607508 D hypothetical protein 607200..607508 Chlorobium chlorochromatii CaD3 3747853 YP_378837.1 CDS Cag_0521 NC_007514.1 607498 607782 D hypothetical protein 607498..607782 Chlorobium chlorochromatii CaD3 3747854 YP_378838.1 CDS Cag_0522 NC_007514.1 608061 608258 D hypothetical protein 608061..608258 Chlorobium chlorochromatii CaD3 3746332 YP_378839.1 CDS ileS NC_007514.1 608416 611667 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 608416..611667 Chlorobium chlorochromatii CaD3 3746333 YP_378840.1 CDS Cag_0524 NC_007514.1 611730 612167 D TraR/DksA family transcriptional regulator 611730..612167 Chlorobium chlorochromatii CaD3 3746334 YP_378841.1 CDS Cag_0525 NC_007514.1 612287 613780 R amidophosphoribosyltransferase complement(612287..613780) Chlorobium chlorochromatii CaD3 3746335 YP_378842.1 CDS Cag_0526 NC_007514.1 614113 614637 D hypothetical protein 614113..614637 Chlorobium chlorochromatii CaD3 3746336 YP_378843.1 CDS Cag_0527 NC_007514.1 614996 615883 D cell division protein 614996..615883 Chlorobium chlorochromatii CaD3 3746337 YP_378844.1 CDS Cag_0528 NC_007514.1 616283 617131 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(616283..617131) Chlorobium chlorochromatii CaD3 3746338 YP_378845.1 CDS Cag_0529 NC_007514.1 617409 631502 R hypothetical protein complement(617409..631502) Chlorobium chlorochromatii CaD3 3746339 YP_378846.1 CDS Cag_0530 NC_007514.1 632445 633530 R hydrogenase formation HypD protein complement(632445..633530) Chlorobium chlorochromatii CaD3 3746340 YP_378847.1 CDS Cag_0531 NC_007514.1 633534 633821 R hydrogenase expression/formation protein HupF/HypC complement(633534..633821) Chlorobium chlorochromatii CaD3 3746341 YP_378848.1 CDS Cag_0532 NC_007514.1 634330 635193 R hypothetical protein complement(634330..635193) Chlorobium chlorochromatii CaD3 3746342 YP_378849.1 CDS Cag_0533 NC_007514.1 635481 637730 R hydrogenase maturation protein HypF complement(635481..637730) Chlorobium chlorochromatii CaD3 3746343 YP_378850.1 CDS Cag_0534 NC_007514.1 637748 638575 R hydrogenase accessory protein HypB complement(637748..638575) Chlorobium chlorochromatii CaD3 3746344 YP_378851.1 CDS Cag_0535 NC_007514.1 638618 640135 R hypothetical protein complement(638618..640135) Chlorobium chlorochromatii CaD3 3746345 YP_378852.1 CDS Cag_0536 NC_007514.1 640287 640703 R hydrogenase expression/synthesis, HypA complement(640287..640703) Chlorobium chlorochromatii CaD3 3746346 YP_378853.1 CDS Cag_0537 NC_007514.1 640802 642244 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase complement(640802..642244) Chlorobium chlorochromatii CaD3 3746347 YP_378854.2 CDS Cag_0538 NC_007514.1 642270 643118 R ferredoxin-NADP reductase complement(642270..643118) Chlorobium chlorochromatii CaD3 3746348 YP_378855.1 CDS hisH NC_007514.1 643445 644050 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 643445..644050 Chlorobium chlorochromatii CaD3 3746349 YP_378856.1 CDS Cag_0540 NC_007514.1 644368 645141 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 644368..645141 Chlorobium chlorochromatii CaD3 3746350 YP_378857.1 CDS Cag_0541 NC_007514.1 645430 646104 D transcriptional regulator 645430..646104 Chlorobium chlorochromatii CaD3 3746351 YP_378858.1 CDS Cag_0542 NC_007514.1 646079 646834 D pseudouridine synthase 646079..646834 Chlorobium chlorochromatii CaD3 3747046 YP_378859.1 CDS Cag_0543 NC_007514.1 646895 648955 D hypothetical protein 646895..648955 Chlorobium chlorochromatii CaD3 3747047 YP_378860.1 CDS Cag_0544 NC_007514.1 649042 649608 R hypothetical protein complement(649042..649608) Chlorobium chlorochromatii CaD3 3747048 YP_378861.1 CDS Cag_0545 NC_007514.1 649867 650103 D hypothetical protein 649867..650103 Chlorobium chlorochromatii CaD3 3747049 YP_378862.1 CDS Cag_0546 NC_007514.1 650202 650768 R hypothetical protein complement(650202..650768) Chlorobium chlorochromatii CaD3 3747050 YP_378863.1 CDS Cag_0547 NC_007514.1 651268 652536 R collagenase complement(651268..652536) Chlorobium chlorochromatii CaD3 3747051 YP_378864.1 CDS Cag_0548 NC_007514.1 652586 654568 R DNA primase complement(652586..654568) Chlorobium chlorochromatii CaD3 3747052 YP_378865.1 CDS Cag_0549 NC_007514.1 654730 655473 D MotA/TolQ/ExbB proton channel family protein 654730..655473 Chlorobium chlorochromatii CaD3 3747053 YP_378866.1 CDS Cag_0550 NC_007514.1 655473 656006 D hypothetical protein 655473..656006 Chlorobium chlorochromatii CaD3 3747054 YP_378867.1 CDS Cag_0551 NC_007514.1 656008 656547 D hypothetical protein 656008..656547 Chlorobium chlorochromatii CaD3 3747055 YP_378868.1 CDS Cag_0552 NC_007514.1 656544 657311 D TonB-like 656544..657311 Chlorobium chlorochromatii CaD3 3747056 YP_378869.1 CDS Cag_0553 NC_007514.1 657379 658035 R hypothetical protein complement(657379..658035) Chlorobium chlorochromatii CaD3 3747057 YP_378870.1 CDS Cag_0554 NC_007514.1 658051 658584 R hypothetical protein complement(658051..658584) Chlorobium chlorochromatii CaD3 3747058 YP_378871.1 CDS Cag_0555 NC_007514.1 658585 658968 R hypothetical protein complement(658585..658968) Chlorobium chlorochromatii CaD3 3747059 YP_378872.1 CDS Cag_0556 NC_007514.1 659396 660430 D hydrogenase expression/formation protein HypE 659396..660430 Chlorobium chlorochromatii CaD3 3747060 YP_378873.1 CDS Cag_0557 NC_007514.1 660522 661502 D cobalamin biosynthesis protein CbiM 660522..661502 Chlorobium chlorochromatii CaD3 3747061 YP_378874.1 CDS Cag_0558 NC_007514.1 661582 662664 R secretion protein HlyD complement(661582..662664) Chlorobium chlorochromatii CaD3 3747062 YP_378875.1 CDS hisI NC_007514.1 662873 663286 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 662873..663286 Chlorobium chlorochromatii CaD3 3747063 YP_378876.1 CDS Cag_0560 NC_007514.1 663270 664007 D ubiquinone/menaquinone biosynthesis methyltransferase 663270..664007 Chlorobium chlorochromatii CaD3 3747064 YP_378877.1 CDS Cag_0561 NC_007514.1 664471 664722 D hypothetical protein 664471..664722 Chlorobium chlorochromatii CaD3 3747508 YP_378878.1 CDS Cag_0562 NC_007514.1 665033 666031 R PAS/PAC sensor protein complement(665033..666031) Chlorobium chlorochromatii CaD3 3747509 YP_378879.1 CDS Cag_0563 NC_007514.1 666254 669361 R PAS/PAC sensor protein complement(666254..669361) Chlorobium chlorochromatii CaD3 3747510 YP_378880.1 CDS Cag_0564 NC_007514.1 669531 669839 D histone-like DNA-binding protein 669531..669839 Chlorobium chlorochromatii CaD3 3747511 YP_378881.1 CDS Cag_0565 NC_007514.1 669928 670521 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(669928..670521) Chlorobium chlorochromatii CaD3 3747512 YP_378882.1 CDS Cag_0566 NC_007514.1 670534 671946 R hypothetical protein complement(670534..671946) Chlorobium chlorochromatii CaD3 3747513 YP_378883.1 CDS Cag_0567 NC_007514.1 672255 672683 D hypothetical protein 672255..672683 Chlorobium chlorochromatii CaD3 3747514 YP_378884.1 CDS Cag_0568 NC_007514.1 672736 674001 R rod shape-determining protein RodA complement(672736..674001) Chlorobium chlorochromatii CaD3 3747515 YP_378885.1 CDS era NC_007514.1 674186 675103 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 674186..675103 Chlorobium chlorochromatii CaD3 3747516 YP_378886.1 CDS rpsA NC_007514.1 675279 677057 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(675279..677057) Chlorobium chlorochromatii CaD3 3747517 YP_378887.1 CDS Cag_0571 NC_007514.1 677141 677719 R cytidylate kinase complement(677141..677719) Chlorobium chlorochromatii CaD3 3747518 YP_378888.1 CDS Cag_0572 NC_007514.1 678292 679383 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 678292..679383 Chlorobium chlorochromatii CaD3 3747519 YP_378889.1 CDS Cag_0573 NC_007514.1 679418 680221 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 679418..680221 Chlorobium chlorochromatii CaD3 3747520 YP_378890.1 CDS Cag_0574 NC_007514.1 680480 680668 D hypothetical protein 680480..680668 Chlorobium chlorochromatii CaD3 3747521 YP_378891.1 CDS Cag_0575 NC_007514.1 680653 680967 D hypothetical protein 680653..680967 Chlorobium chlorochromatii CaD3 3747522 YP_378892.1 CDS Cag_0576 NC_007514.1 681076 681297 D hypothetical protein 681076..681297 Chlorobium chlorochromatii CaD3 3747523 YP_378893.1 CDS Cag_0577 NC_007514.1 681346 682284 D hypothetical protein 681346..682284 Chlorobium chlorochromatii CaD3 3747524 YP_378894.1 CDS Cag_0578 NC_007514.1 682281 683330 D hypothetical protein 682281..683330 Chlorobium chlorochromatii CaD3 3747525 YP_378895.1 CDS ispH NC_007514.1 683327 684313 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 683327..684313 Chlorobium chlorochromatii CaD3 3747526 YP_378896.1 CDS Cag_0580 NC_007514.1 684372 686333 D these proteins belong to a family of oxidoreductases related to the NADPH-dependent glutamate synthase; NADPH-dependent glutamate synthase small subunit 684372..686333 Chlorobium chlorochromatii CaD3 3747527 YP_378897.1 CDS Cag_0581 NC_007514.1 686358 686630 D hypothetical protein 686358..686630 Chlorobium chlorochromatii CaD3 3747489 YP_378898.1 CDS Cag_0582 NC_007514.1 687080 687484 D hypothetical protein 687080..687484 Chlorobium chlorochromatii CaD3 3747490 YP_378899.1 CDS Cag_0583 NC_007514.1 687628 687864 D hypothetical protein 687628..687864 Chlorobium chlorochromatii CaD3 3747491 YP_378900.1 CDS Cag_0584 NC_007514.1 688130 688405 D hypothetical protein 688130..688405 Chlorobium chlorochromatii CaD3 3747492 YP_378901.1 CDS Cag_0585 NC_007514.1 688405 688686 D hypothetical protein 688405..688686 Chlorobium chlorochromatii CaD3 3747493 YP_378902.1 CDS Cag_0586 NC_007514.1 688745 689311 D hypothetical protein 688745..689311 Chlorobium chlorochromatii CaD3 3747494 YP_378903.1 CDS Cag_0587 NC_007514.1 689476 690072 R hypothetical protein complement(689476..690072) Chlorobium chlorochromatii CaD3 3747495 YP_378904.1 CDS Cag_0588 NC_007514.1 690066 691259 R hypothetical protein complement(690066..691259) Chlorobium chlorochromatii CaD3 3747496 YP_378905.1 CDS guaA NC_007514.1 691317 692852 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(691317..692852) Chlorobium chlorochromatii CaD3 3747497 YP_378906.1 CDS Cag_0590 NC_007514.1 692934 695222 R penicillin-binding protein 1A complement(692934..695222) Chlorobium chlorochromatii CaD3 3747498 YP_378907.1 CDS Cag_0591 NC_007514.1 695270 696145 R proline iminopeptidase complement(695270..696145) Chlorobium chlorochromatii CaD3 3747499 YP_378908.1 CDS Cag_0592 NC_007514.1 696372 697031 D DedA family protein 696372..697031 Chlorobium chlorochromatii CaD3 3747500 YP_378909.1 CDS Cag_0593 NC_007514.1 697153 697563 D nucleotidyltransferase substrate-binding protein 697153..697563 Chlorobium chlorochromatii CaD3 3747501 YP_378910.1 CDS Cag_0594 NC_007514.1 697560 697868 D hypothetical protein 697560..697868 Chlorobium chlorochromatii CaD3 3747502 YP_378911.1 CDS Cag_0595 NC_007514.1 697937 698707 R hypothetical protein complement(697937..698707) Chlorobium chlorochromatii CaD3 3747503 YP_378912.1 CDS Cag_0596 NC_007514.1 698937 699458 R acetyltransferase complement(698937..699458) Chlorobium chlorochromatii CaD3 3747504 YP_378913.1 CDS Cag_0597 NC_007514.1 699769 701004 D transposase 699769..701004 Chlorobium chlorochromatii CaD3 3747505 YP_378914.1 CDS Cag_0598 NC_007514.1 701288 702289 R hypothetical protein complement(701288..702289) Chlorobium chlorochromatii CaD3 3747506 YP_378915.1 CDS Cag_0599 NC_007514.1 702757 703590 R hypothetical protein complement(702757..703590) Chlorobium chlorochromatii CaD3 3747507 YP_378916.1 CDS Cag_0600 NC_007514.1 703887 704180 R hypothetical protein complement(703887..704180) Chlorobium chlorochromatii CaD3 3746293 YP_378917.1 CDS Cag_0601 NC_007514.1 704592 704849 R hypothetical protein complement(704592..704849) Chlorobium chlorochromatii CaD3 3746294 YP_378918.1 CDS Cag_0602 NC_007514.1 704964 705965 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(704964..705965) Chlorobium chlorochromatii CaD3 3746295 YP_378919.1 CDS Cag_0603 NC_007514.1 706047 707753 D RecJ exonuclease 706047..707753 Chlorobium chlorochromatii CaD3 3746296 YP_378920.1 CDS Cag_0604 NC_007514.1 707865 708752 R hypothetical protein complement(707865..708752) Chlorobium chlorochromatii CaD3 3746297 YP_378921.1 CDS Cag_0605 NC_007514.1 708736 709668 R glycosyl transferase complement(708736..709668) Chlorobium chlorochromatii CaD3 3746298 YP_378922.1 CDS Cag_0606 NC_007514.1 709687 711237 R hypothetical protein complement(709687..711237) Chlorobium chlorochromatii CaD3 3746299 YP_378923.1 CDS Cag_0607 NC_007514.1 711209 711748 R PA-phosphatase-like phosphoesterase complement(711209..711748) Chlorobium chlorochromatii CaD3 3746300 YP_378924.1 CDS Cag_0608 NC_007514.1 711931 712155 R hypothetical protein complement(711931..712155) Chlorobium chlorochromatii CaD3 3746301 YP_378925.1 CDS Cag_0609 NC_007514.1 712253 712477 D hypothetical protein 712253..712477 Chlorobium chlorochromatii CaD3 3746302 YP_378926.1 CDS Cag_0610 NC_007514.1 712553 713212 R hypothetical protein complement(712553..713212) Chlorobium chlorochromatii CaD3 3746303 YP_378927.1 CDS Cag_0611 NC_007514.1 713435 713845 D anti-sigma regulatory factor (serine/threonine protein kinase) 713435..713845 Chlorobium chlorochromatii CaD3 3746304 YP_378928.1 CDS pgi NC_007514.1 713865 715511 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 713865..715511 Chlorobium chlorochromatii CaD3 3746305 YP_378929.1 CDS Cag_0613 NC_007514.1 716235 716969 D SapC-like protein 716235..716969 Chlorobium chlorochromatii CaD3 3746306 YP_378930.1 CDS Cag_0614 NC_007514.1 717094 827511 D parallel beta-helix repeat-containing protein 717094..827511 Chlorobium chlorochromatii CaD3 3746307 YP_378931.1 CDS Cag_0615 NC_007514.1 827589 829322 D Outer membrane protein-like 827589..829322 Chlorobium chlorochromatii CaD3 3746308 YP_378932.1 CDS Cag_0616 NC_007514.1 829510 891450 D parallel beta-helix repeat-containing protein 829510..891450 Chlorobium chlorochromatii CaD3 3746309 YP_378933.1 CDS Cag_0617 NC_007514.1 891714 892106 R hypothetical protein complement(891714..892106) Chlorobium chlorochromatii CaD3 3746932 YP_378934.1 CDS Cag_0618 NC_007514.1 892192 893184 R formate-dependent nitrite reductase membrane component-like protein complement(892192..893184) Chlorobium chlorochromatii CaD3 3746933 YP_378935.1 CDS Cag_0619 NC_007514.1 893187 893729 R NrfC protein complement(893187..893729) Chlorobium chlorochromatii CaD3 3746934 YP_378936.1 CDS Cag_0620 NC_007514.1 893750 895975 R twin-arginine translocation pathway signal complement(893750..895975) Chlorobium chlorochromatii CaD3 3746935 YP_378937.1 CDS Cag_0621 NC_007514.1 896297 896704 R cytosolic long-chain acyl-CoA thioester hydrolase complement(896297..896704) Chlorobium chlorochromatii CaD3 3746936 YP_378938.1 CDS Cag_0622 NC_007514.1 896940 897461 D deoxycytidylate deaminase 896940..897461 Chlorobium chlorochromatii CaD3 3746937 YP_378939.1 CDS Cag_0623 NC_007514.1 897461 898561 D riboflavin biosynthesis protein RibD 897461..898561 Chlorobium chlorochromatii CaD3 3746938 YP_378940.1 CDS tpx NC_007514.1 898616 899122 D antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 898616..899122 Chlorobium chlorochromatii CaD3 3746939 YP_378941.1 CDS Cag_0625 NC_007514.1 899122 899781 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 899122..899781 Chlorobium chlorochromatii CaD3 3746940 YP_378942.1 CDS Cag_0626 NC_007514.1 899851 901212 D recombination factor protein RarA 899851..901212 Chlorobium chlorochromatii CaD3 3746941 YP_378943.1 CDS Cag_0627 NC_007514.1 901229 902641 D outer membrane efflux protein 901229..902641 Chlorobium chlorochromatii CaD3 3746942 YP_378944.1 CDS Cag_0628 NC_007514.1 902652 903590 R hypothetical protein complement(902652..903590) Chlorobium chlorochromatii CaD3 3746943 YP_378945.1 CDS Cag_0629 NC_007514.1 903654 904136 R Hit family protein complement(903654..904136) Chlorobium chlorochromatii CaD3 3746944 YP_378946.1 CDS Cag_0630 NC_007514.1 904565 905158 D hypothetical protein 904565..905158 Chlorobium chlorochromatii CaD3 3746945 YP_378947.1 CDS Cag_0631 NC_007514.1 905140 906189 D ferrochelatase 905140..906189 Chlorobium chlorochromatii CaD3 3746946 YP_378948.1 CDS Cag_0632 NC_007514.1 906205 906801 D TPR repeat-containing protein 906205..906801 Chlorobium chlorochromatii CaD3 3746947 YP_378949.1 CDS Cag_0633 NC_007514.1 906798 907046 D hypothetical protein 906798..907046 Chlorobium chlorochromatii CaD3 3746948 YP_378950.1 CDS Cag_0634 NC_007514.1 907186 907626 D NADH dehydrogenase I, subunit 3 907186..907626 Chlorobium chlorochromatii CaD3 3746949 YP_378951.1 CDS Cag_0635 NC_007514.1 907643 908215 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 907643..908215 Chlorobium chlorochromatii CaD3 3747312 YP_378952.1 CDS Cag_0636 NC_007514.1 908241 908759 D NADH (or F420H2) dehydrogenase, subunit C 908241..908759 Chlorobium chlorochromatii CaD3 3747313 YP_378953.1 CDS Cag_0637 NC_007514.1 908789 909991 D NADH dehydrogenase I, 49 kDa subunit 908789..909991 Chlorobium chlorochromatii CaD3 3747314 YP_378954.1 CDS Cag_0638 NC_007514.1 909988 911106 D NADH dehydrogenase I chain H 909988..911106 Chlorobium chlorochromatii CaD3 3747315 YP_378955.1 CDS Cag_0639 NC_007514.1 911155 911757 D NADH dehydrogenase I, 23 kDa subunit 911155..911757 Chlorobium chlorochromatii CaD3 3747316 YP_378956.1 CDS Cag_0640 NC_007514.1 911762 912277 D NADH dehydrogenase I subunit 6 911762..912277 Chlorobium chlorochromatii CaD3 3747317 YP_378957.1 CDS Cag_0641 NC_007514.1 912292 912612 D NADH dehydrogenase I subunit 4L 912292..912612 Chlorobium chlorochromatii CaD3 3747318 YP_378958.1 CDS Cag_0642 NC_007514.1 912666 914978 D NADH-plastoquinone oxidoreductase subunit 5 912666..914978 Chlorobium chlorochromatii CaD3 3747319 YP_378959.1 CDS Cag_0643 NC_007514.1 915019 916653 D proton-translocating NADH-quinone oxidoreductase subunit M 915019..916653 Chlorobium chlorochromatii CaD3 3747320 YP_378960.1 CDS Cag_0644 NC_007514.1 916695 918236 D proton-translocating NADH-quinone oxidoreductase subunit N 916695..918236 Chlorobium chlorochromatii CaD3 3747321 YP_378961.1 CDS Cag_0645 NC_007514.1 918428 919213 D hypothetical protein 918428..919213 Chlorobium chlorochromatii CaD3 3747322 YP_378962.1 CDS Cag_0646 NC_007514.1 919226 919699 D hypothetical protein 919226..919699 Chlorobium chlorochromatii CaD3 3747323 YP_378963.1 CDS Cag_0647 NC_007514.1 919985 921058 D glycosyl transferase 919985..921058 Chlorobium chlorochromatii CaD3 3747324 YP_378964.1 CDS Cag_0648 NC_007514.1 921085 921897 D polysaccharide export periplasmic protein 921085..921897 Chlorobium chlorochromatii CaD3 3747325 YP_378965.1 CDS Cag_0649 NC_007514.1 921961 924381 D hypothetical protein 921961..924381 Chlorobium chlorochromatii CaD3 3747326 YP_378966.1 CDS Cag_0650 NC_007514.1 924397 925116 D exopolysaccharide biosynthesis protein 924397..925116 Chlorobium chlorochromatii CaD3 3747327 YP_378967.1 CDS Cag_0651 NC_007514.1 925165 926136 D GDP-L-fucose synthetase 925165..926136 Chlorobium chlorochromatii CaD3 3747328 YP_378968.1 CDS Cag_0652 NC_007514.1 926145 927347 D GDP-mannose 4,6-dehydratase 926145..927347 Chlorobium chlorochromatii CaD3 3747329 YP_378969.1 CDS Cag_0653 NC_007514.1 928258 928599 D transcriptional modulator of MazE/toxin, MazF 928258..928599 Chlorobium chlorochromatii CaD3 3747330 YP_378970.1 CDS Cag_0654 NC_007514.1 929060 929359 D hypothetical protein 929060..929359 Chlorobium chlorochromatii CaD3 3747331 YP_378971.1 CDS Cag_0655 NC_007514.1 929436 929675 D hypothetical protein 929436..929675 Chlorobium chlorochromatii CaD3 3747528 YP_378972.1 CDS Cag_0656 NC_007514.1 929659 930039 D nucleic acid binding protein 929659..930039 Chlorobium chlorochromatii CaD3 3747529 YP_378973.1 CDS Cag_0657 NC_007514.1 930370 931527 D transcriptional regulator 930370..931527 Chlorobium chlorochromatii CaD3 3747530 YP_378974.1 CDS Cag_0658 NC_007514.1 931743 932978 R transposase complement(931743..932978) Chlorobium chlorochromatii CaD3 3747531 YP_378975.1 CDS Cag_0659 NC_007514.1 933468 933740 D hypothetical protein 933468..933740 Chlorobium chlorochromatii CaD3 3747532 YP_378976.1 CDS Cag_0660 NC_007514.1 933737 934126 D hypothetical protein 933737..934126 Chlorobium chlorochromatii CaD3 3747533 YP_378977.1 CDS Cag_0661 NC_007514.1 934166 934366 D hypothetical protein 934166..934366 Chlorobium chlorochromatii CaD3 3747534 YP_378978.1 CDS Cag_0662 NC_007514.1 934842 935195 D hypothetical protein 934842..935195 Chlorobium chlorochromatii CaD3 3747535 YP_378979.1 CDS Cag_0663 NC_007514.1 935574 935888 D hypothetical protein 935574..935888 Chlorobium chlorochromatii CaD3 3747536 YP_378980.1 CDS Cag_0664 NC_007514.1 936305 937204 D transcriptional regulator 936305..937204 Chlorobium chlorochromatii CaD3 3747537 YP_378981.1 CDS Cag_0665 NC_007514.1 937448 938728 D polysaccharide biosynthesis protein 937448..938728 Chlorobium chlorochromatii CaD3 3747538 YP_378982.1 CDS Cag_0666 NC_007514.1 938721 939422 D hypothetical protein 938721..939422 Chlorobium chlorochromatii CaD3 3747539 YP_378983.1 CDS Cag_0667 NC_007514.1 939419 941173 D hypothetical protein 939419..941173 Chlorobium chlorochromatii CaD3 3747540 YP_378984.1 CDS Cag_0668 NC_007514.1 941170 942303 D poly-gamma-glutamate biosynthesis protein 941170..942303 Chlorobium chlorochromatii CaD3 3747541 YP_378985.1 CDS Cag_0669 NC_007514.1 942305 943201 D sugar transferase 942305..943201 Chlorobium chlorochromatii CaD3 3747542 YP_378986.1 CDS Cag_0670 NC_007514.1 943210 944031 D hypothetical protein 943210..944031 Chlorobium chlorochromatii CaD3 3747543 YP_378987.1 CDS Cag_0671 NC_007514.1 944021 945004 D UDP-glucose 4-epimerase 944021..945004 Chlorobium chlorochromatii CaD3 3747544 YP_378988.1 CDS Cag_0672 NC_007514.1 945055 946158 D apparently involved in regulation of cell wall biogenesis; pyridoxal phosphate-dependent enzyme 945055..946158 Chlorobium chlorochromatii CaD3 3747545 YP_378989.1 CDS Cag_0673 NC_007514.1 946158 947141 D glycosyltransferase 946158..947141 Chlorobium chlorochromatii CaD3 3747546 YP_378990.1 CDS Cag_0674 NC_007514.1 947286 948251 D hypothetical protein 947286..948251 Chlorobium chlorochromatii CaD3 3746756 YP_378991.1 CDS Cag_0675 NC_007514.1 948251 948988 D glycosyl transferase 948251..948988 Chlorobium chlorochromatii CaD3 3746757 YP_378992.1 CDS Cag_0676 NC_007514.1 948975 949832 D teichuronic acid biosynthesis 948975..949832 Chlorobium chlorochromatii CaD3 3746758 YP_378993.1 CDS Cag_0678 NC_007514.1 950877 951098 D hypothetical protein 950877..951098 Chlorobium chlorochromatii CaD3 3746759 YP_378994.1 CDS Cag_0679 NC_007514.1 951102 951521 D hypothetical protein 951102..951521 Chlorobium chlorochromatii CaD3 3746760 YP_378995.1 CDS Cag_0680 NC_007514.1 951915 952274 D hypothetical protein 951915..952274 Chlorobium chlorochromatii CaD3 3746761 YP_378996.1 CDS Cag_0681 NC_007514.1 952261 952644 D hypothetical protein 952261..952644 Chlorobium chlorochromatii CaD3 3746762 YP_378997.1 CDS Cag_0682 NC_007514.1 952670 953818 R transposase complement(952670..953818) Chlorobium chlorochromatii CaD3 3746763 YP_378998.1 CDS Cag_0683 NC_007514.1 954542 955039 R hypothetical protein complement(954542..955039) Chlorobium chlorochromatii CaD3 3746764 YP_378999.1 CDS Cag_0684 NC_007514.1 955586 955783 D hypothetical protein 955586..955783 Chlorobium chlorochromatii CaD3 3746765 YP_379000.1 CDS Cag_0685 NC_007514.1 955774 956076 D hypothetical protein 955774..956076 Chlorobium chlorochromatii CaD3 3746766 YP_379001.1 CDS Cag_0686 NC_007514.1 956189 957127 R hypothetical protein complement(956189..957127) Chlorobium chlorochromatii CaD3 3746767 YP_379002.1 CDS Cag_0688 NC_007514.1 958798 959736 R MoaA/NifB/PqqE family protein complement(958798..959736) Chlorobium chlorochromatii CaD3 3746768 YP_379003.1 CDS Cag_0689 NC_007514.1 959742 961088 R PucC protein complement(959742..961088) Chlorobium chlorochromatii CaD3 3746769 YP_379004.1 CDS Cag_0690 NC_007514.1 961350 963047 R hypothetical protein complement(961350..963047) Chlorobium chlorochromatii CaD3 3746770 YP_379005.1 CDS Cag_0691 NC_007514.1 963044 964783 R hypothetical protein complement(963044..964783) Chlorobium chlorochromatii CaD3 3746771 YP_379006.1 CDS Cag_0692 NC_007514.1 964915 965568 R hypothetical protein complement(964915..965568) Chlorobium chlorochromatii CaD3 3746772 YP_379007.1 CDS Cag_0693 NC_007514.1 965701 966426 D sepiapterin reductase 965701..966426 Chlorobium chlorochromatii CaD3 3746773 YP_379008.1 CDS Cag_0694 NC_007514.1 966817 967275 D hypothetical protein 966817..967275 Chlorobium chlorochromatii CaD3 3746774 YP_379009.1 CDS Cag_0695 NC_007514.1 967300 968580 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 967300..968580 Chlorobium chlorochromatii CaD3 3746775 YP_379010.1 CDS Cag_0696 NC_007514.1 969321 969566 R hypothetical protein complement(969321..969566) Chlorobium chlorochromatii CaD3 3747470 YP_379011.1 CDS Cag_0697 NC_007514.1 969702 970103 R hypothetical protein complement(969702..970103) Chlorobium chlorochromatii CaD3 3747471 YP_379012.1 CDS Cag_0698 NC_007514.1 970100 970339 R hypothetical protein complement(970100..970339) Chlorobium chlorochromatii CaD3 3747472 YP_379013.1 CDS Cag_0699 NC_007514.1 970440 972821 D DNA mismatch repair protein MutS-like protein 970440..972821 Chlorobium chlorochromatii CaD3 3747473 YP_379014.1 CDS Cag_0700 NC_007514.1 972916 973506 R thiolredoxin peroxidase complement(972916..973506) Chlorobium chlorochromatii CaD3 3747474 YP_379015.1 CDS Cag_0701 NC_007514.1 973618 974229 R hypothetical protein complement(973618..974229) Chlorobium chlorochromatii CaD3 3747475 YP_379016.1 CDS Cag_0702 NC_007514.1 974478 974906 D phage-related lysozyme 974478..974906 Chlorobium chlorochromatii CaD3 3747476 YP_379017.1 CDS Cag_0703 NC_007514.1 975458 979999 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 975458..979999 Chlorobium chlorochromatii CaD3 3747477 YP_379018.1 CDS Cag_0704 NC_007514.1 980274 981095 D hypothetical protein 980274..981095 Chlorobium chlorochromatii CaD3 3747478 YP_379019.1 CDS Cag_0705 NC_007514.1 981228 981608 D hypothetical protein 981228..981608 Chlorobium chlorochromatii CaD3 3747479 YP_379020.1 CDS Cag_0706 NC_007514.1 982067 982300 D hypothetical protein 982067..982300 Chlorobium chlorochromatii CaD3 3747480 YP_379021.1 CDS Cag_0707 NC_007514.1 982290 982583 D hypothetical protein 982290..982583 Chlorobium chlorochromatii CaD3 3747481 YP_379022.1 CDS Cag_0708 NC_007514.1 982852 984087 R transposase complement(982852..984087) Chlorobium chlorochromatii CaD3 3747482 YP_379023.1 CDS Cag_0709 NC_007514.1 984157 984321 D hypothetical protein 984157..984321 Chlorobium chlorochromatii CaD3 3747483 YP_379024.1 CDS Cag_0710 NC_007514.1 984359 984601 D hypothetical protein 984359..984601 Chlorobium chlorochromatii CaD3 3747484 YP_379025.1 CDS Cag_0711 NC_007514.1 984745 986190 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 984745..986190 Chlorobium chlorochromatii CaD3 3747485 YP_379026.1 CDS Cag_0712 NC_007514.1 986327 987460 D queuine tRNA-ribosyltransferase 986327..987460 Chlorobium chlorochromatii CaD3 3747486 YP_379027.1 CDS Cag_0713 NC_007514.1 987538 988854 D hypothetical protein 987538..988854 Chlorobium chlorochromatii CaD3 3747487 YP_379028.1 CDS Cag_0714 NC_007514.1 988873 989079 D hypothetical protein 988873..989079 Chlorobium chlorochromatii CaD3 3747488 YP_379029.1 CDS Cag_0715 NC_007514.1 989066 989737 D hypothetical protein 989066..989737 Chlorobium chlorochromatii CaD3 3747411 YP_379030.1 CDS Cag_0716 NC_007514.1 989727 991475 D ATPase 989727..991475 Chlorobium chlorochromatii CaD3 3747412 YP_379031.1 CDS Cag_0717 NC_007514.1 991472 993223 D ATPase 991472..993223 Chlorobium chlorochromatii CaD3 3747413 YP_379032.1 CDS Cag_0718 NC_007514.1 993186 993437 R hypothetical protein complement(993186..993437) Chlorobium chlorochromatii CaD3 3747414 YP_379033.1 CDS Cag_0719 NC_007514.1 993430 994071 R hypothetical protein complement(993430..994071) Chlorobium chlorochromatii CaD3 3747415 YP_379034.1 CDS Cag_0720 NC_007514.1 994284 995063 R hypothetical protein complement(994284..995063) Chlorobium chlorochromatii CaD3 3747416 YP_379035.1 CDS Cag_0721 NC_007514.1 995225 996238 R hypothetical protein complement(995225..996238) Chlorobium chlorochromatii CaD3 3747417 YP_379036.1 CDS Cag_0722 NC_007514.1 996712 998142 R hypothetical protein complement(996712..998142) Chlorobium chlorochromatii CaD3 3747418 YP_379037.1 CDS Cag_0723 NC_007514.1 998166 999203 R Gfo/Idh/MocA family oxidoreductase complement(998166..999203) Chlorobium chlorochromatii CaD3 3747419 YP_379038.1 CDS Cag_0724 NC_007514.1 999222 1000790 R hypothetical protein complement(999222..1000790) Chlorobium chlorochromatii CaD3 3747420 YP_379039.1 CDS Cag_0725 NC_007514.1 1000962 1002215 R drug resistance protein complement(1000962..1002215) Chlorobium chlorochromatii CaD3 3747421 YP_379040.1 CDS Cag_0726 NC_007514.1 1002356 1003270 R ABC transporter, periplasmic substrate-binding protein complement(1002356..1003270) Chlorobium chlorochromatii CaD3 3747422 YP_379041.1 CDS Cag_0727 NC_007514.1 1003248 1003700 R NUDIX/MutT family protein complement(1003248..1003700) Chlorobium chlorochromatii CaD3 3747423 YP_379042.1 CDS Cag_0728 NC_007514.1 1003884 1004858 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(1003884..1004858) Chlorobium chlorochromatii CaD3 3747424 YP_379043.1 CDS Cag_0729 NC_007514.1 1005202 1007253 D peptidase S41A, C-terminal protease 1005202..1007253 Chlorobium chlorochromatii CaD3 3747425 YP_379044.1 CDS Cag_0730 NC_007514.1 1007315 1008700 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(1007315..1008700) Chlorobium chlorochromatii CaD3 3747426 YP_379045.1 CDS Cag_0731 NC_007514.1 1008962 1009555 R adenylylsulfate kinase complement(1008962..1009555) Chlorobium chlorochromatii CaD3 3747427 YP_379046.1 CDS Cag_0732 NC_007514.1 1009651 1011771 D TPR repeat-containing protein 1009651..1011771 Chlorobium chlorochromatii CaD3 3747428 YP_379047.1 CDS Cag_0733 NC_007514.1 1012049 1013539 D hypothetical protein 1012049..1013539 Chlorobium chlorochromatii CaD3 3747429 YP_379048.1 CDS Cag_0734 NC_007514.1 1013558 1014037 D hypothetical protein 1013558..1014037 Chlorobium chlorochromatii CaD3 3747430 YP_379049.1 CDS Cag_0735 NC_007514.1 1014164 1014706 D hypothetical protein 1014164..1014706 Chlorobium chlorochromatii CaD3 3746486 YP_379050.1 CDS Cag_0736 NC_007514.1 1014905 1015303 D hypothetical protein 1014905..1015303 Chlorobium chlorochromatii CaD3 3746487 YP_379051.1 CDS Cag_0737 NC_007514.1 1015695 1016018 D nucleotidyltransferase 1015695..1016018 Chlorobium chlorochromatii CaD3 3746488 YP_379052.1 CDS Cag_0738 NC_007514.1 1017685 1044300 D hypothetical protein 1017685..1044300 Chlorobium chlorochromatii CaD3 3746489 YP_379053.1 CDS Cag_0739 NC_007514.1 1044584 1045291 D hypothetical protein 1044584..1045291 Chlorobium chlorochromatii CaD3 3746490 YP_379054.1 CDS Cag_0740 NC_007514.1 1045452 1047215 D Type I secretion system ATPase, PrtD 1045452..1047215 Chlorobium chlorochromatii CaD3 3746491 YP_379055.1 CDS Cag_0743 NC_007514.1 1049137 1050306 D metalloprotease secretion protein 1049137..1050306 Chlorobium chlorochromatii CaD3 3746492 YP_379056.1 CDS Cag_0744 NC_007514.1 1050357 1051706 D Type I secretion outer membrane protein, TolC 1050357..1051706 Chlorobium chlorochromatii CaD3 3746493 YP_379057.1 CDS Cag_0745 NC_007514.1 1051935 1052669 D glycosyl transferase 1051935..1052669 Chlorobium chlorochromatii CaD3 3746494 YP_379058.1 CDS Cag_0746 NC_007514.1 1052782 1053540 D hypothetical protein 1052782..1053540 Chlorobium chlorochromatii CaD3 3746495 YP_379059.1 CDS Cag_0747 NC_007514.1 1053574 1054266 D hypothetical protein 1053574..1054266 Chlorobium chlorochromatii CaD3 3746496 YP_379060.1 CDS Cag_0748 NC_007514.1 1054528 1055763 D transposase 1054528..1055763 Chlorobium chlorochromatii CaD3 3746497 YP_379061.1 CDS Cag_0749 NC_007514.1 1055929 1056450 D hypothetical protein 1055929..1056450 Chlorobium chlorochromatii CaD3 3746498 YP_379062.1 CDS Cag_0750 NC_007514.1 1056684 1057235 D hypothetical protein 1056684..1057235 Chlorobium chlorochromatii CaD3 3746499 YP_379063.1 CDS Cag_0751 NC_007514.1 1057311 1058417 D hypothetical protein 1057311..1058417 Chlorobium chlorochromatii CaD3 3746500 YP_379064.1 CDS Cag_0752 NC_007514.1 1058684 1061068 D ribonuclease R 1058684..1061068 Chlorobium chlorochromatii CaD3 3746501 YP_379065.1 CDS Cag_0753 NC_007514.1 1061268 1061795 D cob(I)alamin adenosyltransferase 1061268..1061795 Chlorobium chlorochromatii CaD3 3746502 YP_379066.1 CDS Cag_0754 NC_007514.1 1061795 1062832 D FecCD transport family protein 1061795..1062832 Chlorobium chlorochromatii CaD3 3746503 YP_379067.1 CDS Cag_0755 NC_007514.1 1062947 1064464 D hypothetical protein 1062947..1064464 Chlorobium chlorochromatii CaD3 3746504 YP_379068.1 CDS Cag_0756 NC_007514.1 1064574 1065755 D hypothetical protein 1064574..1065755 Chlorobium chlorochromatii CaD3 3747603 YP_379069.1 CDS cobD NC_007514.1 1065780 1066745 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1065780..1066745 Chlorobium chlorochromatii CaD3 3747604 YP_379070.1 CDS Cag_0759 NC_007514.1 1067117 1069855 D hypothetical protein 1067117..1069855 Chlorobium chlorochromatii CaD3 3747605 YP_379071.1 CDS Cag_0760 NC_007514.1 1069858 1071798 D DEAD/DEAH box helicase-like protein 1069858..1071798 Chlorobium chlorochromatii CaD3 3747606 YP_379072.1 CDS Cag_0761 NC_007514.1 1071785 1072981 D hypothetical protein 1071785..1072981 Chlorobium chlorochromatii CaD3 3747607 YP_379073.1 CDS Cag_0762 NC_007514.1 1073861 1074814 D hypothetical protein 1073861..1074814 Chlorobium chlorochromatii CaD3 3747608 YP_379074.1 CDS Cag_0763 NC_007514.1 1074992 1078375 D exodeoxyribonuclease V, RecC subunit 1074992..1078375 Chlorobium chlorochromatii CaD3 3747609 YP_379075.1 CDS Cag_0765 NC_007514.1 1079123 1080358 R transposase complement(1079123..1080358) Chlorobium chlorochromatii CaD3 3747610 YP_379076.1 CDS Cag_0766 NC_007514.1 1080457 1080714 D hypothetical protein 1080457..1080714 Chlorobium chlorochromatii CaD3 3747611 YP_379077.1 CDS Cag_0767 NC_007514.1 1080775 1082478 D abortive infection phage resistance protein 1080775..1082478 Chlorobium chlorochromatii CaD3 3747612 YP_379078.1 CDS Cag_0769 NC_007514.1 1083474 1087097 D exodeoxyribonuclease V subunit beta 1083474..1087097 Chlorobium chlorochromatii CaD3 3747613 YP_379079.1 CDS Cag_0770 NC_007514.1 1087346 1089085 D exodeoxyribonuclease V subunit alpha 1087346..1089085 Chlorobium chlorochromatii CaD3 3747614 YP_379080.1 CDS Cag_0771 NC_007514.1 1089177 1089668 D hypothetical protein 1089177..1089668 Chlorobium chlorochromatii CaD3 3747615 YP_379081.1 CDS argC NC_007514.1 1089945 1090952 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1089945..1090952 Chlorobium chlorochromatii CaD3 3747616 YP_379082.1 CDS argJ NC_007514.1 1091080 1092369 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1091080..1092369 Chlorobium chlorochromatii CaD3 3747617 YP_379083.1 CDS Cag_0774 NC_007514.1 1092604 1093464 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1092604..1093464 Chlorobium chlorochromatii CaD3 3747618 YP_379084.1 CDS Cag_0775 NC_007514.1 1093594 1094598 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1093594..1094598 Chlorobium chlorochromatii CaD3 3747620 YP_379085.1 CDS Cag_0776 NC_007514.1 1094629 1095075 D arginine repressor ArgR 1094629..1095075 Chlorobium chlorochromatii CaD3 3747621 YP_379086.1 CDS Cag_0777 NC_007514.1 1095095 1096294 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1095095..1096294 Chlorobium chlorochromatii CaD3 3748062 YP_379087.1 CDS Cag_0778 NC_007514.1 1096584 1097948 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(1096584..1097948) Chlorobium chlorochromatii CaD3 3748063 YP_379088.1 CDS Cag_0779 NC_007514.1 1097968 1098855 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(1097968..1098855) Chlorobium chlorochromatii CaD3 3748064 YP_379089.1 CDS Cag_0780 NC_007514.1 1099153 1099734 D hypothetical protein 1099153..1099734 Chlorobium chlorochromatii CaD3 3748065 YP_379090.1 CDS Cag_0781 NC_007514.1 1099727 1101163 D sigma-54 factor 1099727..1101163 Chlorobium chlorochromatii CaD3 3748066 YP_379091.1 CDS Cag_0782 NC_007514.1 1101167 1101715 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1101167..1101715 Chlorobium chlorochromatii CaD3 3748067 YP_379092.1 CDS hslU NC_007514.1 1101994 1103481 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1101994..1103481 Chlorobium chlorochromatii CaD3 3748068 YP_379093.1 CDS Cag_0784 NC_007514.1 1103508 1104029 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1103508..1104029 Chlorobium chlorochromatii CaD3 3748069 YP_379094.1 CDS Cag_0785 NC_007514.1 1104044 1104463 R hypothetical protein complement(1104044..1104463) Chlorobium chlorochromatii CaD3 3748070 YP_379095.1 CDS Cag_0786 NC_007514.1 1104450 1104710 R hypothetical protein complement(1104450..1104710) Chlorobium chlorochromatii CaD3 3748071 YP_379096.1 CDS Cag_0787 NC_007514.1 1104851 1106185 R alkaline phosphatase complement(1104851..1106185) Chlorobium chlorochromatii CaD3 3748072 YP_379097.1 CDS Cag_0788 NC_007514.1 1106516 1107751 R transposase complement(1106516..1107751) Chlorobium chlorochromatii CaD3 3748073 YP_379098.1 CDS Cag_0789 NC_007514.1 1107977 1109962 D periplasmic sensor hybrid histidine kinase 1107977..1109962 Chlorobium chlorochromatii CaD3 3748074 YP_379099.1 CDS Cag_0790 NC_007514.1 1110049 1111587 R hypothetical protein complement(1110049..1111587) Chlorobium chlorochromatii CaD3 3748075 YP_379100.1 CDS Cag_0791 NC_007514.1 1111663 1112328 R cell wall-associated hydrolase (invasion-associated proteins)-like protein complement(1111663..1112328) Chlorobium chlorochromatii CaD3 3748076 YP_379101.1 CDS Cag_0792 NC_007514.1 1112596 1113660 D basic membrane protein A 1112596..1113660 Chlorobium chlorochromatii CaD3 3748077 YP_379102.1 CDS Cag_0793 NC_007514.1 1113714 1114709 D 3-beta hydroxysteroid dehydrogenase/isomerase 1113714..1114709 Chlorobium chlorochromatii CaD3 3748078 YP_379103.1 CDS Cag_0794 NC_007514.1 1114825 1115466 D hypothetical protein 1114825..1115466 Chlorobium chlorochromatii CaD3 3748079 YP_379104.1 CDS Cag_0795 NC_007514.1 1115474 1116331 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(1115474..1116331) Chlorobium chlorochromatii CaD3 3748080 YP_379105.1 CDS Cag_0796 NC_007514.1 1116440 1117636 D citrate lyase, subunit 1 1116440..1117636 Chlorobium chlorochromatii CaD3 3747450 YP_379106.1 CDS Cag_0797 NC_007514.1 1117684 1119516 D citrate lyase, subunit 2 1117684..1119516 Chlorobium chlorochromatii CaD3 3747451 YP_379107.1 CDS Cag_0798 NC_007514.1 1119712 1120875 R aspartate aminotransferase complement(1119712..1120875) Chlorobium chlorochromatii CaD3 3747452 YP_379108.1 CDS Cag_0799 NC_007514.1 1120924 1124568 R oxidoreductase, FAD-binding complement(1120924..1124568) Chlorobium chlorochromatii CaD3 3747453 YP_379109.1 CDS Cag_0800 NC_007514.1 1124699 1125538 R hypothetical protein complement(1124699..1125538) Chlorobium chlorochromatii CaD3 3747454 YP_379110.1 CDS rplS NC_007514.1 1125677 1126039 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(1125677..1126039) Chlorobium chlorochromatii CaD3 3747455 YP_379111.1 CDS trmD NC_007514.1 1126066 1126761 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(1126066..1126761) Chlorobium chlorochromatii CaD3 3747456 YP_379112.1 CDS Cag_0803 NC_007514.1 1126793 1127296 R 16S rRNA-processing protein RimM complement(1126793..1127296) Chlorobium chlorochromatii CaD3 3747457 YP_379113.1 CDS rpsP NC_007514.1 1127329 1127739 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(1127329..1127739) Chlorobium chlorochromatii CaD3 3747458 YP_379114.1 CDS Cag_0805 NC_007514.1 1127792 1129147 R Signal recognition particle protein complement(1127792..1129147) Chlorobium chlorochromatii CaD3 3747459 YP_379115.1 CDS Cag_0806 NC_007514.1 1129256 1130290 D bifunctional ADP-heptose synthase 1129256..1130290 Chlorobium chlorochromatii CaD3 3747460 YP_379116.1 CDS Cag_0807 NC_007514.1 1130395 1131855 D DNA-methyltransferase, type I restriction-modification enzyme subunit M 1130395..1131855 Chlorobium chlorochromatii CaD3 3747461 YP_379117.1 CDS Cag_0808 NC_007514.1 1131852 1132943 D specificity determinant HsdS-like 1131852..1132943 Chlorobium chlorochromatii CaD3 3747462 YP_379118.1 CDS Cag_0809 NC_007514.1 1133897 1134358 D transposase 1133897..1134358 Chlorobium chlorochromatii CaD3 3747463 YP_379119.1 CDS Cag_0810 NC_007514.1 1134416 1136809 D DEAD/DEAH box helicase-like protein 1134416..1136809 Chlorobium chlorochromatii CaD3 3747464 YP_379120.1 CDS Cag_0811 NC_007514.1 1136940 1137581 R hypothetical protein complement(1136940..1137581) Chlorobium chlorochromatii CaD3 3747465 YP_379121.1 CDS Cag_0812 NC_007514.1 1137735 1138397 R hypothetical protein complement(1137735..1138397) Chlorobium chlorochromatii CaD3 3747466 YP_379122.1 CDS Cag_0813 NC_007514.1 1138419 1140074 R peptidase S41A, C-terminal protease complement(1138419..1140074) Chlorobium chlorochromatii CaD3 3747467 YP_379123.1 CDS Cag_0814 NC_007514.1 1140990 1141502 R hypothetical protein complement(1140990..1141502) Chlorobium chlorochromatii CaD3 3747468 YP_379124.1 CDS Cag_0815 NC_007514.1 1141931 1142605 D thiamine-phosphate pyrophosphorylase 1141931..1142605 Chlorobium chlorochromatii CaD3 3747469 YP_379125.1 CDS Cag_0816 NC_007514.1 1142602 1143255 D thiamine monophosphate synthase 1142602..1143255 Chlorobium chlorochromatii CaD3 3746815 YP_379126.1 CDS Cag_0817 NC_007514.1 1143252 1144079 D phosphomethylpyrimidine kinase 1143252..1144079 Chlorobium chlorochromatii CaD3 3746816 YP_379127.1 CDS Cag_0818 NC_007514.1 1144432 1144824 R hypothetical protein complement(1144432..1144824) Chlorobium chlorochromatii CaD3 3746817 YP_379128.1 CDS Cag_0819 NC_007514.1 1144817 1145056 R hypothetical protein complement(1144817..1145056) Chlorobium chlorochromatii CaD3 3746818 YP_379129.1 CDS Cag_0820 NC_007514.1 1145221 1146225 R hypothetical protein complement(1145221..1146225) Chlorobium chlorochromatii CaD3 3746819 YP_379130.1 CDS Cag_0821 NC_007514.1 1146374 1147711 R UDP-glucose/GDP-mannose dehydrogenase complement(1146374..1147711) Chlorobium chlorochromatii CaD3 3746820 YP_379131.1 CDS Cag_0822 NC_007514.1 1147844 1148695 R hypothetical protein complement(1147844..1148695) Chlorobium chlorochromatii CaD3 3746821 YP_379132.1 CDS Cag_0823 NC_007514.1 1148836 1150422 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(1148836..1150422) Chlorobium chlorochromatii CaD3 3746822 YP_379133.1 CDS Cag_0824 NC_007514.1 1150406 1151470 R DHH family protein complement(1150406..1151470) Chlorobium chlorochromatii CaD3 3746823 YP_379134.1 CDS Cag_0825 NC_007514.1 1151584 1152684 D hypothetical protein 1151584..1152684 Chlorobium chlorochromatii CaD3 3746824 YP_379135.1 CDS Cag_0826 NC_007514.1 1152719 1153525 D hypothetical protein 1152719..1153525 Chlorobium chlorochromatii CaD3 3746825 YP_379136.1 CDS Cag_0827 NC_007514.1 1153534 1154190 D adenylate kinase 1153534..1154190 Chlorobium chlorochromatii CaD3 3746826 YP_379137.1 CDS Cag_0828 NC_007514.1 1154285 1156732 D primosomal protein n 1154285..1156732 Chlorobium chlorochromatii CaD3 3746827 YP_379138.1 CDS Cag_0829 NC_007514.1 1156774 1157103 R transcriptional modulator of MazE/toxin, MazF complement(1156774..1157103) Chlorobium chlorochromatii CaD3 3746828 YP_379139.1 CDS Cag_0830 NC_007514.1 1157100 1157312 R hypothetical protein complement(1157100..1157312) Chlorobium chlorochromatii CaD3 3746829 YP_379140.1 CDS Cag_0831 NC_007514.1 1157520 1158569 D AsnC family transcriptional regulator 1157520..1158569 Chlorobium chlorochromatii CaD3 3746830 YP_379141.1 CDS Cag_0832 NC_007514.1 1158648 1159883 D transposase 1158648..1159883 Chlorobium chlorochromatii CaD3 3746831 YP_379142.1 CDS Cag_0833 NC_007514.1 1160095 1160334 R hypothetical protein complement(1160095..1160334) Chlorobium chlorochromatii CaD3 3746832 YP_379143.1 CDS Cag_0834 NC_007514.1 1160364 1161167 R hypothetical protein complement(1160364..1161167) Chlorobium chlorochromatii CaD3 3746833 YP_379144.1 CDS Cag_0835 NC_007514.1 1161151 1161564 R hypothetical protein complement(1161151..1161564) Chlorobium chlorochromatii CaD3 3746795 YP_379145.1 CDS Cag_0836 NC_007514.1 1162001 1162441 R hypothetical protein complement(1162001..1162441) Chlorobium chlorochromatii CaD3 3746796 YP_379146.1 CDS Cag_0837 NC_007514.1 1162740 1163639 D alpha/beta hydrolase 1162740..1163639 Chlorobium chlorochromatii CaD3 3746797 YP_379147.1 CDS Cag_0838 NC_007514.1 1163934 1165376 D hypothetical protein 1163934..1165376 Chlorobium chlorochromatii CaD3 3746798 YP_379148.1 CDS Cag_0839 NC_007514.1 1165383 1166024 D hypothetical protein 1165383..1166024 Chlorobium chlorochromatii CaD3 3746799 YP_379149.1 CDS Cag_0840 NC_007514.1 1166236 1170351 R TPR repeat-containing protein complement(1166236..1170351) Chlorobium chlorochromatii CaD3 3746800 YP_379150.1 CDS Cag_0841 NC_007514.1 1170943 1171170 D hypothetical protein 1170943..1171170 Chlorobium chlorochromatii CaD3 3746801 YP_379151.1 CDS Cag_0843 NC_007514.1 1171771 1175148 D hypothetical protein 1171771..1175148 Chlorobium chlorochromatii CaD3 3746802 YP_379152.1 CDS Cag_0844 NC_007514.1 1175145 1176338 D hypothetical protein 1175145..1176338 Chlorobium chlorochromatii CaD3 3746803 YP_379153.1 CDS Cag_0845 NC_007514.1 1176737 1177132 D XRE family transcriptional regulator 1176737..1177132 Chlorobium chlorochromatii CaD3 3746804 YP_379154.1 CDS Cag_0846 NC_007514.1 1177160 1177690 R cobalamin biosynthesis protein CobP complement(1177160..1177690) Chlorobium chlorochromatii CaD3 3746805 YP_379155.1 CDS Cag_0847 NC_007514.1 1177760 1179976 R helicase RecD/TraA complement(1177760..1179976) Chlorobium chlorochromatii CaD3 3746806 YP_379156.1 CDS Cag_0848 NC_007514.1 1179976 1180284 R histone-like DNA-binding protein complement(1179976..1180284) Chlorobium chlorochromatii CaD3 3746807 YP_379157.1 CDS Cag_0849 NC_007514.1 1180454 1181149 R ATPase complement(1180454..1181149) Chlorobium chlorochromatii CaD3 3746808 YP_379158.1 CDS Cag_0850 NC_007514.1 1181142 1181870 R ATPase complement(1181142..1181870) Chlorobium chlorochromatii CaD3 3746809 YP_379159.1 CDS Cag_0851 NC_007514.1 1181867 1182868 R branched-chain amino acid ABC transporter permease complement(1181867..1182868) Chlorobium chlorochromatii CaD3 3746810 YP_379160.1 CDS Cag_0852 NC_007514.1 1182869 1183738 R branched-chain amino acid ABC transporter permease complement(1182869..1183738) Chlorobium chlorochromatii CaD3 3746811 YP_379161.1 CDS Cag_0853 NC_007514.1 1183878 1185023 R branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein complement(1183878..1185023) Chlorobium chlorochromatii CaD3 3746812 YP_379162.1 CDS Cag_0854 NC_007514.1 1185124 1185345 R hypothetical protein complement(1185124..1185345) Chlorobium chlorochromatii CaD3 3746813 YP_379163.1 CDS Cag_0855 NC_007514.1 1185433 1185615 D hypothetical protein 1185433..1185615 Chlorobium chlorochromatii CaD3 3746814 YP_379164.1 CDS Cag_0856 NC_007514.1 1186090 1188861 R hypothetical protein complement(1186090..1188861) Chlorobium chlorochromatii CaD3 3747566 YP_379165.1 CDS Cag_0857 NC_007514.1 1189209 1189373 R hypothetical protein complement(1189209..1189373) Chlorobium chlorochromatii CaD3 3747567 YP_379166.1 CDS Cag_0858 NC_007514.1 1189360 1189632 R hypothetical protein complement(1189360..1189632) Chlorobium chlorochromatii CaD3 3747568 YP_379167.1 CDS Cag_0859 NC_007514.1 1189816 1191768 R oxaloacetate decarboxylase subunit alpha complement(1189816..1191768) Chlorobium chlorochromatii CaD3 3747569 YP_379168.1 CDS Cag_0860 NC_007514.1 1192034 1193554 R Fe-S type hydro-lyase tartrate/fumarate alpha and beta region complement(1192034..1193554) Chlorobium chlorochromatii CaD3 3747570 YP_379169.1 CDS Cag_0861 NC_007514.1 1193843 1195441 D hypothetical protein 1193843..1195441 Chlorobium chlorochromatii CaD3 3747571 YP_379170.1 CDS Cag_0862 NC_007514.1 1195530 1196462 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(1195530..1196462) Chlorobium chlorochromatii CaD3 3747572 YP_379171.1 CDS rpmA NC_007514.1 1196731 1196988 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(1196731..1196988) Chlorobium chlorochromatii CaD3 3747575 YP_379172.1 CDS rplU NC_007514.1 1197031 1197321 R 50S ribosomal protein L21 complement(1197031..1197321) Chlorobium chlorochromatii CaD3 3747576 YP_379173.1 CDS Cag_0865 NC_007514.1 1197469 1197930 R hypothetical protein complement(1197469..1197930) Chlorobium chlorochromatii CaD3 3747577 YP_379174.1 CDS Cag_0866 NC_007514.1 1197989 1198252 R hypothetical protein complement(1197989..1198252) Chlorobium chlorochromatii CaD3 3747578 YP_379175.1 CDS Cag_0867 NC_007514.1 1198249 1198545 R hypothetical protein complement(1198249..1198545) Chlorobium chlorochromatii CaD3 3747579 YP_379176.1 CDS Cag_0868 NC_007514.1 1198650 1200185 R RND efflux system outer membrane lipoprotein NodT complement(1198650..1200185) Chlorobium chlorochromatii CaD3 3747580 YP_379177.1 CDS Cag_0869 NC_007514.1 1200223 1200954 R ATPase complement(1200223..1200954) Chlorobium chlorochromatii CaD3 3747581 YP_379178.1 CDS Cag_0870 NC_007514.1 1200958 1202160 R ABC transporter permease complement(1200958..1202160) Chlorobium chlorochromatii CaD3 3747582 YP_379179.1 CDS Cag_0871 NC_007514.1 1202157 1203377 R secretion protein HlyD complement(1202157..1203377) Chlorobium chlorochromatii CaD3 3747332 YP_379180.1 CDS Cag_0872 NC_007514.1 1203569 1204939 D hypothetical protein 1203569..1204939 Chlorobium chlorochromatii CaD3 3747333 YP_379181.1 CDS Cag_0873 NC_007514.1 1204936 1206639 D TPR repeat-containing protein 1204936..1206639 Chlorobium chlorochromatii CaD3 3747334 YP_379182.1 CDS Cag_0874 NC_007514.1 1206683 1207846 D hypothetical protein 1206683..1207846 Chlorobium chlorochromatii CaD3 3747335 YP_379183.1 CDS Cag_0875 NC_007514.1 1207864 1208580 D glutamine amidotransferase, class I 1207864..1208580 Chlorobium chlorochromatii CaD3 3747336 YP_379184.1 CDS Cag_0876 NC_007514.1 1208588 1209967 D DNA photolyase, class 2 1208588..1209967 Chlorobium chlorochromatii CaD3 3747337 YP_379185.1 CDS Cag_0877 NC_007514.1 1210075 1210812 R hypothetical protein complement(1210075..1210812) Chlorobium chlorochromatii CaD3 3747338 YP_379186.1 CDS Cag_0878 NC_007514.1 1210809 1211891 R hypothetical protein complement(1210809..1211891) Chlorobium chlorochromatii CaD3 3747339 YP_379187.1 CDS pfkA NC_007514.1 1211927 1212979 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(1211927..1212979) Chlorobium chlorochromatii CaD3 3747340 YP_379188.1 CDS Cag_0880 NC_007514.1 1213263 1213715 R hypothetical protein complement(1213263..1213715) Chlorobium chlorochromatii CaD3 3747341 YP_379189.1 CDS Cag_0881 NC_007514.1 1213776 1213928 R hypothetical protein complement(1213776..1213928) Chlorobium chlorochromatii CaD3 3747342 YP_379190.1 CDS Cag_0882 NC_007514.1 1213988 1215442 R sulfide-quinone reductase complement(1213988..1215442) Chlorobium chlorochromatii CaD3 3747343 YP_379191.1 CDS Cag_0883 NC_007514.1 1215679 1215882 R hypothetical protein complement(1215679..1215882) Chlorobium chlorochromatii CaD3 3747344 YP_379192.1 CDS Cag_0884 NC_007514.1 1215951 1216628 R hypothetical protein complement(1215951..1216628) Chlorobium chlorochromatii CaD3 3747345 YP_379193.1 CDS Cag_0885 NC_007514.1 1216712 1217356 R methyltransferase complement(1216712..1217356) Chlorobium chlorochromatii CaD3 3747346 YP_379194.1 CDS Cag_0886 NC_007514.1 1217353 1217886 R hypothetical protein complement(1217353..1217886) Chlorobium chlorochromatii CaD3 3747347 YP_379195.1 CDS Cag_0887 NC_007514.1 1217902 1218300 R hypothetical protein complement(1217902..1218300) Chlorobium chlorochromatii CaD3 3747348 YP_379196.1 CDS Cag_0888 NC_007514.1 1218452 1219660 R iron-containing alcohol dehydrogenase complement(1218452..1219660) Chlorobium chlorochromatii CaD3 3747349 YP_379197.1 CDS Cag_0889 NC_007514.1 1219728 1221041 R transporter complement(1219728..1221041) Chlorobium chlorochromatii CaD3 3747350 YP_379198.1 CDS Cag_0890 NC_007514.1 1221177 1221692 D methylated-DNA-(protein)-cysteine S-methyltransferase 1221177..1221692 Chlorobium chlorochromatii CaD3 3747351 YP_379199.1 CDS Cag_0891 NC_007514.1 1221741 1222622 R metacaspase complement(1221741..1222622) Chlorobium chlorochromatii CaD3 3748081 YP_379200.1 CDS Cag_0892 NC_007514.1 1222701 1224104 R internalin-like protein complement(1222701..1224104) Chlorobium chlorochromatii CaD3 3748082 YP_379201.1 CDS Cag_0893 NC_007514.1 1224229 1227798 D DNA polymerase III subunit alpha 1224229..1227798 Chlorobium chlorochromatii CaD3 3748083 YP_379202.1 CDS Cag_0894 NC_007514.1 1227874 1229610 R hypothetical protein complement(1227874..1229610) Chlorobium chlorochromatii CaD3 3748084 YP_379203.1 CDS Cag_0895 NC_007514.1 1229607 1230062 R hypothetical protein complement(1229607..1230062) Chlorobium chlorochromatii CaD3 3748085 YP_379204.1 CDS Cag_0896 NC_007514.1 1230109 1230897 R methyltransferase complement(1230109..1230897) Chlorobium chlorochromatii CaD3 3748086 YP_379205.1 CDS Cag_0897 NC_007514.1 1231067 1231261 R hypothetical protein complement(1231067..1231261) Chlorobium chlorochromatii CaD3 3748087 YP_379206.1 CDS pyrC NC_007514.1 1231394 1232722 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(1231394..1232722) Chlorobium chlorochromatii CaD3 3748088 YP_379207.1 CDS Cag_0899 NC_007514.1 1232975 1233559 D 5-formyltetrahydrofolate cyclo-ligase 1232975..1233559 Chlorobium chlorochromatii CaD3 3748090 YP_379208.1 CDS Cag_0900 NC_007514.1 1233594 1235717 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1233594..1235717 Chlorobium chlorochromatii CaD3 3748091 YP_379209.1 CDS Cag_0901 NC_007514.1 1235714 1236166 D ribose/galactose isomerase 1235714..1236166 Chlorobium chlorochromatii CaD3 3748092 YP_379210.1 CDS Cag_0902 NC_007514.1 1236145 1236837 D XRE family transcriptional regulator 1236145..1236837 Chlorobium chlorochromatii CaD3 3748093 YP_379211.1 CDS Cag_0903 NC_007514.1 1237181 1238410 D peptidase M20D, amidohydrolase 1237181..1238410 Chlorobium chlorochromatii CaD3 3748094 YP_379212.1 CDS Cag_0904 NC_007514.1 1238471 1239058 R hypothetical protein complement(1238471..1239058) Chlorobium chlorochromatii CaD3 3748095 YP_379213.1 CDS ddl NC_007514.1 1239058 1240140 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(1239058..1240140) Chlorobium chlorochromatii CaD3 3748096 YP_379214.1 CDS Cag_0906 NC_007514.1 1240368 1241162 D lipoate-protein ligase A 1240368..1241162 Chlorobium chlorochromatii CaD3 3748097 YP_379215.1 CDS panB NC_007514.1 1241490 1242323 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1241490..1242323 Chlorobium chlorochromatii CaD3 3748098 YP_379216.1 CDS Cag_0908 NC_007514.1 1242588 1242869 D prevent-host-death protein 1242588..1242869 Chlorobium chlorochromatii CaD3 3746834 YP_379217.1 CDS Cag_0909 NC_007514.1 1242866 1243147 D hypothetical protein 1242866..1243147 Chlorobium chlorochromatii CaD3 3746835 YP_379218.1 CDS Cag_0911 NC_007514.1 1243727 1245412 D hypothetical protein 1243727..1245412 Chlorobium chlorochromatii CaD3 3746836 YP_379219.1 CDS Cag_0912 NC_007514.1 1246137 1246601 D hypothetical protein 1246137..1246601 Chlorobium chlorochromatii CaD3 3746837 YP_379220.1 CDS Cag_0913 NC_007514.1 1246954 1247295 D hypothetical protein 1246954..1247295 Chlorobium chlorochromatii CaD3 3746838 YP_379221.1 CDS Cag_0914 NC_007514.1 1247299 1247625 D XRE family transcriptional regulator 1247299..1247625 Chlorobium chlorochromatii CaD3 3746839 YP_379222.1 CDS Cag_0916 NC_007514.1 1248356 1248760 D cytochrome C 1248356..1248760 Chlorobium chlorochromatii CaD3 3746840 YP_379223.1 CDS Cag_0917 NC_007514.1 1248852 1249187 R cytochrome c-555 complement(1248852..1249187) Chlorobium chlorochromatii CaD3 3746841 YP_379224.1 CDS Cag_0918 NC_007514.1 1249459 1250016 D cytochrome c family protein 1249459..1250016 Chlorobium chlorochromatii CaD3 3746842 YP_379225.1 CDS Cag_0919 NC_007514.1 1250109 1251350 R ABC transporter permease complement(1250109..1251350) Chlorobium chlorochromatii CaD3 3746843 YP_379226.1 CDS Cag_0920 NC_007514.1 1251366 1252634 R hypothetical protein complement(1251366..1252634) Chlorobium chlorochromatii CaD3 3746844 YP_379227.1 CDS Cag_0921 NC_007514.1 1253056 1254312 R diguanylate cyclase complement(1253056..1254312) Chlorobium chlorochromatii CaD3 3746845 YP_379228.1 CDS Cag_0922 NC_007514.1 1254566 1255258 D hypothetical protein 1254566..1255258 Chlorobium chlorochromatii CaD3 3746846 YP_379229.1 CDS Cag_0923 NC_007514.1 1255263 1256750 D amino acid permease 1255263..1256750 Chlorobium chlorochromatii CaD3 3746847 YP_379230.1 CDS Cag_0924 NC_007514.1 1256755 1257453 D short chain dehydrogenase/reductase oxidoreductase 1256755..1257453 Chlorobium chlorochromatii CaD3 3746848 YP_379231.1 CDS Cag_0925 NC_007514.1 1257479 1258147 D thymidylate kinase 1257479..1258147 Chlorobium chlorochromatii CaD3 3746849 YP_379232.1 CDS Cag_0926 NC_007514.1 1258255 1259517 D hypothetical protein 1258255..1259517 Chlorobium chlorochromatii CaD3 3746850 YP_379233.1 CDS Cag_0927 NC_007514.1 1259555 1262722 D Beta-phosphoglucomutase hydrolase 1259555..1262722 Chlorobium chlorochromatii CaD3 3746851 YP_379234.1 CDS Cag_0928 NC_007514.1 1262809 1263849 D S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1262809..1263849 Chlorobium chlorochromatii CaD3 3746852 YP_379235.1 CDS Cag_0929 NC_007514.1 1263894 1264655 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1263894..1264655 Chlorobium chlorochromatii CaD3 3746853 YP_379236.1 CDS Cag_0930 NC_007514.1 1264935 1265384 D phenylacetic acid degradation-like protein 1264935..1265384 Chlorobium chlorochromatii CaD3 3747083 YP_379237.1 CDS Cag_0931 NC_007514.1 1265432 1266829 D Elongator protein 3/MiaB/NifB 1265432..1266829 Chlorobium chlorochromatii CaD3 3747084 YP_379238.1 CDS aspS NC_007514.1 1266950 1268767 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1266950..1268767) Chlorobium chlorochromatii CaD3 3747085 YP_379239.1 CDS Cag_0933 NC_007514.1 1268930 1269433 R DNA polymerase III subunit gamma/tau complement(1268930..1269433) Chlorobium chlorochromatii CaD3 3747086 YP_379240.1 CDS Cag_0934 NC_007514.1 1269562 1270752 R ATPase complement(1269562..1270752) Chlorobium chlorochromatii CaD3 3747087 YP_379241.1 CDS Cag_0935 NC_007514.1 1270957 1272255 R ribonuclease BN complement(1270957..1272255) Chlorobium chlorochromatii CaD3 3747088 YP_379242.1 CDS Cag_0936 NC_007514.1 1272299 1273675 R MFS transporter family protein complement(1272299..1273675) Chlorobium chlorochromatii CaD3 3747089 YP_379243.1 CDS Cag_0937 NC_007514.1 1273704 1274408 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I complement(1273704..1274408) Chlorobium chlorochromatii CaD3 3747090 YP_379244.1 CDS Cag_0938 NC_007514.1 1274488 1274742 R phosphoribosylformylglycinamidine synthetase PurS complement(1274488..1274742) Chlorobium chlorochromatii CaD3 3747091 YP_379245.1 CDS Cag_0939 NC_007514.1 1274779 1275582 R CDP-diacylglycerol--serine O-phosphatidyltransferase complement(1274779..1275582) Chlorobium chlorochromatii CaD3 3747092 YP_379246.1 CDS Cag_0940 NC_007514.1 1275940 1276980 R hypothetical protein complement(1275940..1276980) Chlorobium chlorochromatii CaD3 3747093 YP_379247.1 CDS Cag_0941 NC_007514.1 1276984 1278252 R CAAX prenyl protease 1 complement(1276984..1278252) Chlorobium chlorochromatii CaD3 3747094 YP_379248.1 CDS Cag_0942 NC_007514.1 1278328 1279212 R carbon-nitrogen hydrolase complement(1278328..1279212) Chlorobium chlorochromatii CaD3 3747095 YP_379249.1 CDS Cag_0943 NC_007514.1 1279243 1280139 R catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(1279243..1280139) Chlorobium chlorochromatii CaD3 3747096 YP_379250.1 CDS Cag_0944 NC_007514.1 1280132 1281193 R thioredoxin reductase complement(1280132..1281193) Chlorobium chlorochromatii CaD3 3747097 YP_379251.1 CDS Cag_0945 NC_007514.1 1281218 1281553 R hypothetical protein complement(1281218..1281553) Chlorobium chlorochromatii CaD3 3747098 YP_379252.1 CDS Cag_0946 NC_007514.1 1281788 1283380 D peptide chain release factor 3 1281788..1283380 Chlorobium chlorochromatii CaD3 3747099 YP_379253.1 CDS Cag_0947 NC_007514.1 1283462 1285405 D D-alanine-D-alanine ligase-like protein 1283462..1285405 Chlorobium chlorochromatii CaD3 3747100 YP_379254.1 CDS Cag_0948 NC_007514.1 1285421 1285891 R hypothetical protein complement(1285421..1285891) Chlorobium chlorochromatii CaD3 3747101 YP_379255.1 CDS Cag_0949 NC_007514.1 1286069 1287790 D D-alanine-D-alanine ligase-like protein 1286069..1287790 Chlorobium chlorochromatii CaD3 3746524 YP_379256.1 CDS Cag_0950 NC_007514.1 1288189 1289112 R K+-dependent Na+/Ca+ exchanger-like protein complement(1288189..1289112) Chlorobium chlorochromatii CaD3 3746525 YP_379257.1 CDS Cag_0951 NC_007514.1 1289134 1289712 R hypothetical protein complement(1289134..1289712) Chlorobium chlorochromatii CaD3 3746526 YP_379258.1 CDS Cag_0952 NC_007514.1 1289804 1290718 R polysulfide reductase, subunit C complement(1289804..1290718) Chlorobium chlorochromatii CaD3 3746527 YP_379259.1 CDS Cag_0953 NC_007514.1 1290738 1291337 R polysulfide reductase, subunit B complement(1290738..1291337) Chlorobium chlorochromatii CaD3 3746528 YP_379260.1 CDS Cag_0954 NC_007514.1 1291484 1294267 R twin-arginine translocation pathway signal complement(1291484..1294267) Chlorobium chlorochromatii CaD3 3746529 YP_379261.1 CDS Cag_0955 NC_007514.1 1294375 1295190 R rhodanese-like protein complement(1294375..1295190) Chlorobium chlorochromatii CaD3 3746530 YP_379262.1 CDS Cag_0956 NC_007514.1 1295446 1295727 D prevent-host-death protein 1295446..1295727 Chlorobium chlorochromatii CaD3 3746531 YP_379263.1 CDS Cag_0957 NC_007514.1 1295724 1296053 D hypothetical protein 1295724..1296053 Chlorobium chlorochromatii CaD3 3746532 YP_379264.1 CDS Cag_0958 NC_007514.1 1296190 1296525 R hypothetical protein complement(1296190..1296525) Chlorobium chlorochromatii CaD3 3746533 YP_379265.1 CDS Cag_0959 NC_007514.1 1296538 1298823 R heavy metal translocating P-type ATPase complement(1296538..1298823) Chlorobium chlorochromatii CaD3 3746534 YP_379266.1 CDS Cag_0960 NC_007514.1 1298841 1299704 R this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein complement(1298841..1299704) Chlorobium chlorochromatii CaD3 3746535 YP_379267.1 CDS Cag_0961 NC_007514.1 1299817 1300317 R PA-phosphatase-like phosphoesterase complement(1299817..1300317) Chlorobium chlorochromatii CaD3 3746536 YP_379268.1 CDS Cag_0962 NC_007514.1 1300726 1301454 R hypothetical protein complement(1300726..1301454) Chlorobium chlorochromatii CaD3 3746537 YP_379269.1 CDS Cag_0963 NC_007514.1 1301514 1302488 R polyprenyl synthetase complement(1301514..1302488) Chlorobium chlorochromatii CaD3 3746538 YP_379270.1 CDS Cag_0964 NC_007514.1 1302885 1303613 D Sec-independent periplasmic protein translocase 1302885..1303613 Chlorobium chlorochromatii CaD3 3746539 YP_379271.1 CDS coaE NC_007514.1 1303643 1304281 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(1303643..1304281) Chlorobium chlorochromatii CaD3 3746540 YP_379272.1 CDS Cag_0966 NC_007514.1 1304271 1304624 R hypothetical protein complement(1304271..1304624) Chlorobium chlorochromatii CaD3 3746541 YP_379273.1 CDS Cag_0967 NC_007514.1 1304764 1305360 D superoxide dismutase 1304764..1305360 Chlorobium chlorochromatii CaD3 3746542 YP_379274.1 CDS Cag_0968 NC_007514.1 1305530 1305949 R hypothetical protein complement(1305530..1305949) Chlorobium chlorochromatii CaD3 3746543 YP_379275.1 CDS Cag_0969 NC_007514.1 1305981 1307300 R hypothetical protein complement(1305981..1307300) Chlorobium chlorochromatii CaD3 3746894 YP_379276.1 CDS Cag_0970 NC_007514.1 1307374 1307751 R hypothetical protein complement(1307374..1307751) Chlorobium chlorochromatii CaD3 3746895 YP_379277.1 CDS Cag_0971 NC_007514.1 1307812 1310922 R NolG efflux transporter complement(1307812..1310922) Chlorobium chlorochromatii CaD3 3746896 YP_379278.1 CDS Cag_0972 NC_007514.1 1310941 1312002 R secretion protein HlyD complement(1310941..1312002) Chlorobium chlorochromatii CaD3 3746897 YP_379279.1 CDS Cag_0973 NC_007514.1 1312099 1312830 R transcriptional regulator complement(1312099..1312830) Chlorobium chlorochromatii CaD3 3746898 YP_379280.1 CDS Cag_0974 NC_007514.1 1312996 1313682 R hypothetical protein complement(1312996..1313682) Chlorobium chlorochromatii CaD3 3746899 YP_379281.1 CDS Cag_0975 NC_007514.1 1314105 1314329 D chlorosome envelope protein B 1314105..1314329 Chlorobium chlorochromatii CaD3 3746900 YP_379282.1 CDS Cag_0976 NC_007514.1 1314434 1315111 D HAD family hydrolase 1314434..1315111 Chlorobium chlorochromatii CaD3 3746901 YP_379283.1 CDS Cag_0977 NC_007514.1 1315144 1316697 D hypothetical protein 1315144..1316697 Chlorobium chlorochromatii CaD3 3746902 YP_379284.1 CDS Cag_0978 NC_007514.1 1316694 1317440 D ParaA family ATPase 1316694..1317440 Chlorobium chlorochromatii CaD3 3746903 YP_379285.1 CDS Cag_0979 NC_007514.1 1317496 1318221 R ATPase complement(1317496..1318221) Chlorobium chlorochromatii CaD3 3746904 YP_379286.1 CDS Cag_0980 NC_007514.1 1318588 1319691 D hypothetical protein 1318588..1319691 Chlorobium chlorochromatii CaD3 3746905 YP_379287.1 CDS Cag_0981 NC_007514.1 1319847 1321196 D hypothetical protein 1319847..1321196 Chlorobium chlorochromatii CaD3 3746906 YP_379288.1 CDS Cag_0982 NC_007514.1 1321209 1324469 D acyl-CoA synthetase 1321209..1324469 Chlorobium chlorochromatii CaD3 3746907 YP_379289.1 CDS Cag_0983 NC_007514.1 1324771 1328595 D magnesium-chelatase, subunit H 1324771..1328595 Chlorobium chlorochromatii CaD3 3746908 YP_379290.1 CDS Cag_0984 NC_007514.1 1328822 1330063 R hypothetical protein complement(1328822..1330063) Chlorobium chlorochromatii CaD3 3746909 YP_379291.1 CDS Cag_0985 NC_007514.1 1330276 1330524 D XRE family transcriptional regulator 1330276..1330524 Chlorobium chlorochromatii CaD3 3746910 YP_379292.1 CDS Cag_0986 NC_007514.1 1330600 1332054 D outer membrane efflux protein 1330600..1332054 Chlorobium chlorochromatii CaD3 3746911 YP_379293.1 CDS Cag_0987 NC_007514.1 1332330 1333589 D secretion protein HlyD 1332330..1333589 Chlorobium chlorochromatii CaD3 3746912 YP_379294.1 CDS Cag_0988 NC_007514.1 1333586 1334287 D ATPase 1333586..1334287 Chlorobium chlorochromatii CaD3 3747736 YP_379295.1 CDS Cag_0989 NC_007514.1 1334382 1335596 D ABC transporter efflux protein 1334382..1335596 Chlorobium chlorochromatii CaD3 3747737 YP_379296.1 CDS Cag_0990 NC_007514.1 1335619 1336854 D ABC transporter efflux protein 1335619..1336854 Chlorobium chlorochromatii CaD3 3747738 YP_379297.1 CDS Cag_0991 NC_007514.1 1337042 1338016 R hypothetical protein complement(1337042..1338016) Chlorobium chlorochromatii CaD3 3747739 YP_379298.1 CDS Cag_0992 NC_007514.1 1338727 1338909 D hypothetical protein 1338727..1338909 Chlorobium chlorochromatii CaD3 3747740 YP_379299.1 CDS Cag_0993 NC_007514.1 1338916 1339215 D hypothetical protein 1338916..1339215 Chlorobium chlorochromatii CaD3 3747741 YP_379300.1 CDS Cag_0994 NC_007514.1 1339237 1339419 D hypothetical protein 1339237..1339419 Chlorobium chlorochromatii CaD3 3747742 YP_379301.1 CDS Cag_0995 NC_007514.1 1339426 1339704 D hypothetical protein 1339426..1339704 Chlorobium chlorochromatii CaD3 3747743 YP_379302.1 CDS Cag_0997 NC_007514.1 1340116 1340511 D hypothetical protein 1340116..1340511 Chlorobium chlorochromatii CaD3 3747744 YP_379304.1 CDS Cag_0999 NC_007514.1 1341019 1341696 D hypothetical protein 1341019..1341696 Chlorobium chlorochromatii CaD3 3747746 YP_379305.1 CDS Cag_1000 NC_007514.1 1342028 1342414 D hypothetical protein 1342028..1342414 Chlorobium chlorochromatii CaD3 3747747 YP_379308.1 CDS Cag_1003 NC_007514.1 1343294 1343671 R hypothetical protein complement(1343294..1343671) Chlorobium chlorochromatii CaD3 3747750 YP_379309.1 CDS Cag_1004 NC_007514.1 1343970 1344260 R hypothetical protein complement(1343970..1344260) Chlorobium chlorochromatii CaD3 3747751 YP_379310.1 CDS Cag_1005 NC_007514.1 1344306 1345337 R hypothetical protein complement(1344306..1345337) Chlorobium chlorochromatii CaD3 3747752 YP_379311.1 CDS Cag_1006 NC_007514.1 1345334 1345981 R hypothetical protein complement(1345334..1345981) Chlorobium chlorochromatii CaD3 3747753 YP_379312.1 CDS Cag_1007 NC_007514.1 1346002 1346844 R CRISPR-associated Csh2 family protein complement(1346002..1346844) Chlorobium chlorochromatii CaD3 3747754 YP_379313.1 CDS Cag_1008 NC_007514.1 1346873 1348801 R CRISPR-associated Csd1 family protein complement(1346873..1348801) Chlorobium chlorochromatii CaD3 3747755 YP_379314.1 CDS Cag_1009 NC_007514.1 1348798 1349514 R CRISPR-associated Csd1 family protein complement(1348798..1349514) Chlorobium chlorochromatii CaD3 3746737 YP_379315.1 CDS Cag_1010 NC_007514.1 1349524 1351998 R CRISPR-associated helicase Cas3 family protein complement(1349524..1351998) Chlorobium chlorochromatii CaD3 3746738 YP_379316.1 CDS Cag_1011 NC_007514.1 1352481 1353599 R L-threonine-O-3-phosphate decarboxylase complement(1352481..1353599) Chlorobium chlorochromatii CaD3 3746739 YP_379317.1 CDS Cag_1012 NC_007514.1 1353577 1355097 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(1353577..1355097) Chlorobium chlorochromatii CaD3 3746740 YP_379318.1 CDS Cag_1013 NC_007514.1 1355091 1355735 R nitroreductase complement(1355091..1355735) Chlorobium chlorochromatii CaD3 3746741 YP_379319.1 CDS Cag_1014 NC_007514.1 1356053 1357996 R TonB-dependent receptor-like protein complement(1356053..1357996) Chlorobium chlorochromatii CaD3 3746742 YP_379320.1 CDS Cag_1015 NC_007514.1 1358615 1359589 R hypothetical protein complement(1358615..1359589) Chlorobium chlorochromatii CaD3 3746743 YP_379321.1 CDS Cag_1016 NC_007514.1 1359894 1360589 D hypothetical protein 1359894..1360589 Chlorobium chlorochromatii CaD3 3746744 YP_379322.1 CDS Cag_1017 NC_007514.1 1361039 1361977 D hypothetical protein 1361039..1361977 Chlorobium chlorochromatii CaD3 3746745 YP_379323.1 CDS secA NC_007514.1 1362394 1365447 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 1362394..1365447 Chlorobium chlorochromatii CaD3 3746746 YP_379324.1 CDS Cag_1019 NC_007514.1 1365493 1367778 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1365493..1367778 Chlorobium chlorochromatii CaD3 3746747 YP_379325.1 CDS Cag_1020 NC_007514.1 1368168 1369745 D hypothetical protein 1368168..1369745 Chlorobium chlorochromatii CaD3 3746748 YP_379326.1 CDS Cag_1021 NC_007514.1 1369800 1371317 R hypothetical protein complement(1369800..1371317) Chlorobium chlorochromatii CaD3 3746749 YP_379327.1 CDS Cag_1022 NC_007514.1 1371435 1377236 R hypothetical protein complement(1371435..1377236) Chlorobium chlorochromatii CaD3 3746750 YP_379328.1 CDS Cag_1023 NC_007514.1 1377302 1378519 R glycosyltransferase-like protein complement(1377302..1378519) Chlorobium chlorochromatii CaD3 3746751 YP_379329.1 CDS Cag_1024 NC_007514.1 1378520 1380037 R hypothetical protein complement(1378520..1380037) Chlorobium chlorochromatii CaD3 3746752 YP_379330.1 CDS Cag_1025 NC_007514.1 1380089 1381606 R hypothetical protein complement(1380089..1381606) Chlorobium chlorochromatii CaD3 3746753 YP_379331.1 CDS Cag_1026 NC_007514.1 1381847 1394986 R C-type lectin complement(1381847..1394986) Chlorobium chlorochromatii CaD3 3746754 YP_379332.1 CDS Cag_1027 NC_007514.1 1395188 1396390 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(1395188..1396390) Chlorobium chlorochromatii CaD3 3746755 YP_379333.1 CDS Cag_1028 NC_007514.1 1396661 1398169 D heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C 1396661..1398169 Chlorobium chlorochromatii CaD3 3747756 YP_379334.1 CDS Cag_1029 NC_007514.1 1398353 1400323 D heterodisulfide reductase, subunit A 1398353..1400323 Chlorobium chlorochromatii CaD3 3747757 YP_379335.1 CDS Cag_1030 NC_007514.1 1400408 1400857 D hydrogenase, methyl-violgen-reducing type subunit delta 1400408..1400857 Chlorobium chlorochromatii CaD3 3747758 YP_379336.1 CDS Cag_1031 NC_007514.1 1400864 1401700 D hydrogenase, iron-sulfur binding protein 1400864..1401700 Chlorobium chlorochromatii CaD3 3747759 YP_379337.1 CDS Cag_1032 NC_007514.1 1401712 1402725 D hydrogenase/sulfur reductase subunit beta 1401712..1402725 Chlorobium chlorochromatii CaD3 3747760 YP_379338.1 CDS Cag_1033 NC_007514.1 1402736 1403590 D hydrogenase/sulfur reductase subunit gamma 1402736..1403590 Chlorobium chlorochromatii CaD3 3747761 YP_379339.1 CDS Cag_1034 NC_007514.1 1403907 1404872 R hypothetical protein complement(1403907..1404872) Chlorobium chlorochromatii CaD3 3747762 YP_379340.1 CDS Cag_1035 NC_007514.1 1406113 1406646 D hypothetical protein 1406113..1406646 Chlorobium chlorochromatii CaD3 3747763 YP_379341.1 CDS Cag_1036 NC_007514.1 1406725 1407015 D hypothetical protein 1406725..1407015 Chlorobium chlorochromatii CaD3 3747764 YP_379342.1 CDS Cag_1037 NC_007514.1 1407190 1407645 D hypothetical protein 1407190..1407645 Chlorobium chlorochromatii CaD3 3747765 YP_379343.1 CDS Cag_1038 NC_007514.1 1407794 1408201 D hypothetical protein 1407794..1408201 Chlorobium chlorochromatii CaD3 3747766 YP_379344.1 CDS Cag_1039 NC_007514.1 1408290 1408841 R peptidoglycan-associated (lipo)protein-like protein complement(1408290..1408841) Chlorobium chlorochromatii CaD3 3747767 YP_379345.1 CDS Cag_1040 NC_007514.1 1409175 1409699 D hypothetical protein 1409175..1409699 Chlorobium chlorochromatii CaD3 3747768 YP_379346.1 CDS Cag_1041 NC_007514.1 1409777 1410067 D hypothetical protein 1409777..1410067 Chlorobium chlorochromatii CaD3 3747769 YP_379347.1 CDS Cag_1042 NC_007514.1 1410353 1410823 D hypothetical protein 1410353..1410823 Chlorobium chlorochromatii CaD3 3747770 YP_379348.1 CDS Cag_1043 NC_007514.1 1410881 1411084 D hypothetical protein 1410881..1411084 Chlorobium chlorochromatii CaD3 3747771 YP_379349.1 CDS Cag_1044 NC_007514.1 1411104 1411451 D hypothetical protein 1411104..1411451 Chlorobium chlorochromatii CaD3 3747772 YP_379350.1 CDS Cag_1045 NC_007514.1 1411475 1414048 D hypothetical protein 1411475..1414048 Chlorobium chlorochromatii CaD3 3747773 YP_379351.1 CDS Cag_1046 NC_007514.1 1414240 1415802 D hypothetical protein 1414240..1415802 Chlorobium chlorochromatii CaD3 3747774 YP_379352.1 CDS Cag_1047 NC_007514.1 1416029 1417507 D hypothetical protein 1416029..1417507 Chlorobium chlorochromatii CaD3 3747775 YP_379353.1 CDS Cag_1048 NC_007514.1 1417669 1421049 D hypothetical protein 1417669..1421049 Chlorobium chlorochromatii CaD3 3747029 YP_379354.1 CDS Cag_1049 NC_007514.1 1421332 1421529 D hypothetical protein 1421332..1421529 Chlorobium chlorochromatii CaD3 3747030 YP_379355.1 CDS Cag_1050 NC_007514.1 1422067 1422360 D hypothetical protein 1422067..1422360 Chlorobium chlorochromatii CaD3 3747031 YP_379356.1 CDS Cag_1051 NC_007514.1 1422743 1423045 D hypothetical protein 1422743..1423045 Chlorobium chlorochromatii CaD3 3747032 YP_379357.1 CDS Cag_1052 NC_007514.1 1423658 1424986 R hypothetical protein complement(1423658..1424986) Chlorobium chlorochromatii CaD3 3747033 YP_379358.1 CDS Cag_1053 NC_007514.1 1425092 1429435 R filamentous hemagglutinin complement(1425092..1429435) Chlorobium chlorochromatii CaD3 3747034 YP_379359.1 CDS Cag_1054 NC_007514.1 1429504 1431234 R activation/secretion signal peptide protein complement(1429504..1431234) Chlorobium chlorochromatii CaD3 3747035 YP_379360.1 CDS Cag_1055 NC_007514.1 1431759 1436114 R filamentous hemagglutinin complement(1431759..1436114) Chlorobium chlorochromatii CaD3 3747037 YP_379361.1 CDS Cag_1056 NC_007514.1 1436182 1437912 R hemolysin activation/secretion protein-like complement(1436182..1437912) Chlorobium chlorochromatii CaD3 3747039 YP_379362.1 CDS Cag_1057 NC_007514.1 1438222 1438980 R cobalamin-5-phosphate synthase CobS complement(1438222..1438980) Chlorobium chlorochromatii CaD3 3747040 YP_379363.1 CDS cobT NC_007514.1 1438984 1440048 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(1438984..1440048) Chlorobium chlorochromatii CaD3 3747041 YP_379364.1 CDS Cag_1059 NC_007514.1 1440094 1441092 R hypothetical protein complement(1440094..1441092) Chlorobium chlorochromatii CaD3 3747042 YP_379365.1 CDS Cag_1060 NC_007514.1 1441377 1442483 R in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; MobB is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA complement(1441377..1442483) Chlorobium chlorochromatii CaD3 3747043 YP_379366.1 CDS Cag_1061 NC_007514.1 1442501 1443415 R phage AbiD protein complement(1442501..1443415) Chlorobium chlorochromatii CaD3 3747044 YP_379367.1 CDS Cag_1062 NC_007514.1 1443874 1445340 R hypothetical protein complement(1443874..1445340) Chlorobium chlorochromatii CaD3 3747045 YP_379368.1 CDS Cag_1063 NC_007514.1 1445420 1446655 D transposase 1445420..1446655 Chlorobium chlorochromatii CaD3 3746717 YP_379369.1 CDS Cag_1064 NC_007514.1 1446707 1447933 R molybdopterin binding domain-containing protein complement(1446707..1447933) Chlorobium chlorochromatii CaD3 3746718 YP_379370.1 CDS moaC NC_007514.1 1447930 1448874 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA complement(1447930..1448874) Chlorobium chlorochromatii CaD3 3746719 YP_379371.1 CDS Cag_1066 NC_007514.1 1448871 1449152 R hypothetical protein complement(1448871..1449152) Chlorobium chlorochromatii CaD3 3746720 YP_379372.1 CDS Cag_1067 NC_007514.1 1449166 1449435 R hypothetical protein complement(1449166..1449435) Chlorobium chlorochromatii CaD3 3746721 YP_379373.1 CDS Cag_1068 NC_007514.1 1449677 1450579 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1449677..1450579 Chlorobium chlorochromatii CaD3 3746722 YP_379374.1 CDS Cag_1069 NC_007514.1 1450612 1451181 D hypothetical protein 1450612..1451181 Chlorobium chlorochromatii CaD3 3746723 YP_379375.1 CDS Cag_1070 NC_007514.1 1451308 1452186 R hypothetical protein complement(1451308..1452186) Chlorobium chlorochromatii CaD3 3746724 YP_379376.1 CDS Cag_1071 NC_007514.1 1452372 1454261 R molecular chaperone; heat shock protein 90 complement(1452372..1454261) Chlorobium chlorochromatii CaD3 3746725 YP_379377.1 CDS Cag_1072 NC_007514.1 1454547 1455428 R sialic acid synthase complement(1454547..1455428) Chlorobium chlorochromatii CaD3 3746726 YP_379378.1 CDS Cag_1073 NC_007514.1 1455526 1456044 R phosphatase kdsC complement(1455526..1456044) Chlorobium chlorochromatii CaD3 3746727 YP_379379.1 CDS Cag_1074 NC_007514.1 1456228 1457529 D xanthine/uracil permease 1456228..1457529 Chlorobium chlorochromatii CaD3 3746728 YP_379380.1 CDS Cag_1075 NC_007514.1 1457541 1458383 D carbon-nitrogen hydrolase 1457541..1458383 Chlorobium chlorochromatii CaD3 3746729 YP_379381.1 CDS Cag_1076 NC_007514.1 1458376 1459218 R hypothetical protein complement(1458376..1459218) Chlorobium chlorochromatii CaD3 3746730 YP_379382.1 CDS Cag_1077 NC_007514.1 1459223 1459624 R hypothetical protein complement(1459223..1459624) Chlorobium chlorochromatii CaD3 3746731 YP_379383.1 CDS Cag_1078 NC_007514.1 1459621 1459869 R AbrB family transcriptional regulator complement(1459621..1459869) Chlorobium chlorochromatii CaD3 3746732 YP_379384.1 CDS Cag_1079 NC_007514.1 1459989 1461254 R ATPase complement(1459989..1461254) Chlorobium chlorochromatii CaD3 3746733 YP_379385.1 CDS Cag_1080 NC_007514.1 1461357 1462874 R hypothetical protein complement(1461357..1462874) Chlorobium chlorochromatii CaD3 3746734 YP_379386.1 CDS Cag_1081 NC_007514.1 1463210 1464631 D D-alanyl-D-alanine carboxypeptidase 1463210..1464631 Chlorobium chlorochromatii CaD3 3746735 YP_379387.1 CDS Cag_1082 NC_007514.1 1464739 1464927 R ferredoxin, 4Fe-4S complement(1464739..1464927) Chlorobium chlorochromatii CaD3 3746736 YP_379388.1 CDS Cag_1083 NC_007514.1 1465060 1466019 R PhoH family protein complement(1465060..1466019) Chlorobium chlorochromatii CaD3 3747950 YP_379389.1 CDS Cag_1084 NC_007514.1 1466203 1467183 R ADP-L-glycero-D-manno-heptose-6-epimerase complement(1466203..1467183) Chlorobium chlorochromatii CaD3 3747951 YP_379390.1 CDS Cag_1085 NC_007514.1 1467362 1467760 R hypothetical protein complement(1467362..1467760) Chlorobium chlorochromatii CaD3 3747952 YP_379391.1 CDS Cag_1086 NC_007514.1 1467990 1469081 D histidinol-phosphate aminotransferase 1467990..1469081 Chlorobium chlorochromatii CaD3 3747953 YP_379392.1 CDS Cag_1087 NC_007514.1 1469078 1469632 D SpoU rRNA methylase 1469078..1469632 Chlorobium chlorochromatii CaD3 3747954 YP_379393.1 CDS Cag_1088 NC_007514.1 1469670 1470455 D alpha/beta hydrolase 1469670..1470455 Chlorobium chlorochromatii CaD3 3747955 YP_379394.1 CDS Cag_1089 NC_007514.1 1470466 1471119 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(1470466..1471119) Chlorobium chlorochromatii CaD3 3747956 YP_379395.1 CDS hppA NC_007514.1 1471230 1473656 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1471230..1473656 Chlorobium chlorochromatii CaD3 3747957 YP_379396.1 CDS Cag_1091 NC_007514.1 1474068 1475036 D hypothetical protein 1474068..1475036 Chlorobium chlorochromatii CaD3 3747958 YP_379397.1 CDS Cag_1092 NC_007514.1 1475323 1478955 R hypothetical protein complement(1475323..1478955) Chlorobium chlorochromatii CaD3 3747959 YP_379398.1 CDS Cag_1093 NC_007514.1 1478952 1480256 R exonuclease complement(1478952..1480256) Chlorobium chlorochromatii CaD3 3747960 YP_379399.1 CDS Cag_1094 NC_007514.1 1480443 1481729 D hypothetical protein 1480443..1481729 Chlorobium chlorochromatii CaD3 3747961 YP_379400.1 CDS Cag_1095 NC_007514.1 1481823 1482149 D SMR drug efflux transporter 1481823..1482149 Chlorobium chlorochromatii CaD3 3747962 YP_379401.1 CDS Cag_1096 NC_007514.1 1482157 1483245 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1482157..1483245 Chlorobium chlorochromatii CaD3 3747963 YP_379402.1 CDS Cag_1097 NC_007514.1 1483498 1484538 D hypothetical protein 1483498..1484538 Chlorobium chlorochromatii CaD3 3747964 YP_379403.1 CDS Cag_1098 NC_007514.1 1484674 1486071 D hypothetical protein 1484674..1486071 Chlorobium chlorochromatii CaD3 3747965 YP_379404.1 CDS Cag_1099 NC_007514.1 1486323 1487564 D DNA modification methylase-like protein 1486323..1487564 Chlorobium chlorochromatii CaD3 3747966 YP_379405.1 CDS Cag_1100 NC_007514.1 1487671 1488264 D hypothetical protein 1487671..1488264 Chlorobium chlorochromatii CaD3 3747967 YP_379406.1 CDS Cag_1101 NC_007514.1 1488373 1489581 D transcriptional regulator 1488373..1489581 Chlorobium chlorochromatii CaD3 3747968 YP_379407.1 CDS proA NC_007514.1 1489710 1490966 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1489710..1490966 Chlorobium chlorochromatii CaD3 3748320 YP_379408.1 CDS Cag_1103 NC_007514.1 1491093 1491383 D hypothetical protein 1491093..1491383 Chlorobium chlorochromatii CaD3 3748321 YP_379409.1 CDS Cag_1104 NC_007514.1 1491355 1491594 D hypothetical protein 1491355..1491594 Chlorobium chlorochromatii CaD3 3748322 YP_379410.1 CDS Cag_1105 NC_007514.1 1492029 1492928 D bacteriochlorophyll/chlorophyll a synthase 1492029..1492928 Chlorobium chlorochromatii CaD3 3748323 YP_379411.1 CDS Cag_1106 NC_007514.1 1492925 1493572 D glycosyl transferase 1492925..1493572 Chlorobium chlorochromatii CaD3 3748324 YP_379412.1 CDS Cag_1107 NC_007514.1 1493593 1495860 R ComEC/Rec2-like protein complement(1493593..1495860) Chlorobium chlorochromatii CaD3 3748325 YP_379413.1 CDS Cag_1108 NC_007514.1 1496045 1496914 D 5,10-methylenetetrahydrofolate reductase 1496045..1496914 Chlorobium chlorochromatii CaD3 3748326 YP_379414.1 CDS Cag_1109 NC_007514.1 1497068 1498324 R diaminopimelate decarboxylase complement(1497068..1498324) Chlorobium chlorochromatii CaD3 3748327 YP_379415.1 CDS rpmG NC_007514.1 1498535 1498717 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1498535..1498717 Chlorobium chlorochromatii CaD3 3748328 YP_379416.1 CDS Cag_1111 NC_007514.1 1499073 1499873 D hypothetical protein 1499073..1499873 Chlorobium chlorochromatii CaD3 3748329 YP_379417.1 CDS Cag_1112 NC_007514.1 1500740 1501675 D hypothetical protein 1500740..1501675 Chlorobium chlorochromatii CaD3 3748330 YP_379418.1 CDS Cag_1113 NC_007514.1 1502232 1502645 D hypothetical protein 1502232..1502645 Chlorobium chlorochromatii CaD3 3748331 YP_379419.1 CDS Cag_1114 NC_007514.1 1502746 1503903 R DegT/DnrJ/EryC1/StrS family protein complement(1502746..1503903) Chlorobium chlorochromatii CaD3 3748332 YP_379420.1 CDS Cag_1115 NC_007514.1 1503996 1505306 R 3-deoxy-D-manno-octulosonic-acid transferase complement(1503996..1505306) Chlorobium chlorochromatii CaD3 3748333 YP_379421.1 CDS Cag_1116 NC_007514.1 1505789 1507711 D DEAD/DEAH box helicase-like protein 1505789..1507711 Chlorobium chlorochromatii CaD3 3748334 YP_379422.1 CDS Cag_1117 NC_007514.1 1507723 1508199 D hypothetical protein 1507723..1508199 Chlorobium chlorochromatii CaD3 3748335 YP_379423.1 CDS Cag_1118 NC_007514.1 1508225 1509139 R tyrosine recombinase XerD complement(1508225..1509139) Chlorobium chlorochromatii CaD3 3748336 YP_379424.1 CDS Cag_1119 NC_007514.1 1509145 1510434 R Fmu, rRNA SAM-dependent methyltransferase complement(1509145..1510434) Chlorobium chlorochromatii CaD3 3748337 YP_379425.1 CDS Cag_1120 NC_007514.1 1510560 1512143 D type I restriction-modification system specificity subunit 1510560..1512143 Chlorobium chlorochromatii CaD3 3748338 YP_379426.1 CDS Cag_1121 NC_007514.1 1512148 1513386 D hypothetical protein 1512148..1513386 Chlorobium chlorochromatii CaD3 3748339 YP_379427.1 CDS Cag_1122 NC_007514.1 1513370 1514656 D restriction endonuclease S subunits-like protein 1513370..1514656 Chlorobium chlorochromatii CaD3 3747276 YP_379428.1 CDS Cag_1123 NC_007514.1 1514844 1515440 D hypothetical protein 1514844..1515440 Chlorobium chlorochromatii CaD3 3747279 YP_379429.1 CDS Cag_1124 NC_007514.1 1515437 1518691 D Type I site-specific deoxyribonuclease HsdR 1515437..1518691 Chlorobium chlorochromatii CaD3 3747280 YP_379430.1 CDS Cag_1125 NC_007514.1 1518946 1520868 D propionate--CoA ligase 1518946..1520868 Chlorobium chlorochromatii CaD3 3747281 YP_379431.1 CDS Cag_1126 NC_007514.1 1520865 1521272 D hypothetical protein 1520865..1521272 Chlorobium chlorochromatii CaD3 3747282 YP_379432.1 CDS Cag_1127 NC_007514.1 1521301 1523097 D Acetyl-CoA carboxylase alpha subunit-like 1521301..1523097 Chlorobium chlorochromatii CaD3 3747283 YP_379433.1 CDS Cag_1128 NC_007514.1 1523220 1524350 R iron-containing alcohol dehydrogenase complement(1523220..1524350) Chlorobium chlorochromatii CaD3 3747284 YP_379434.1 CDS Cag_1129 NC_007514.1 1524509 1524712 D hypothetical protein 1524509..1524712 Chlorobium chlorochromatii CaD3 3747285 YP_379435.1 CDS Cag_1130 NC_007514.1 1524713 1525009 D hypothetical protein 1524713..1525009 Chlorobium chlorochromatii CaD3 3747286 YP_379436.1 CDS Cag_1131 NC_007514.1 1525024 1525821 R hypothetical protein complement(1525024..1525821) Chlorobium chlorochromatii CaD3 3747287 YP_379437.1 CDS Cag_1132 NC_007514.1 1525876 1526565 R acylneuraminate cytidylyltransferase complement(1525876..1526565) Chlorobium chlorochromatii CaD3 3747288 YP_379438.1 CDS Cag_1133 NC_007514.1 1526758 1527714 R hypothetical protein complement(1526758..1527714) Chlorobium chlorochromatii CaD3 3747289 YP_379439.1 CDS Cag_1134 NC_007514.1 1527711 1528775 R hypothetical protein complement(1527711..1528775) Chlorobium chlorochromatii CaD3 3747290 YP_379440.1 CDS Cag_1135 NC_007514.1 1529044 1530876 D long-chain fatty-acid-CoA ligase 1529044..1530876 Chlorobium chlorochromatii CaD3 3747291 YP_379441.1 CDS Cag_1136 NC_007514.1 1531344 1531922 R hypothetical protein complement(1531344..1531922) Chlorobium chlorochromatii CaD3 3747292 YP_379442.1 CDS Cag_1137 NC_007514.1 1531982 1532827 R hypothetical protein complement(1531982..1532827) Chlorobium chlorochromatii CaD3 3747855 YP_379443.1 CDS Cag_1138 NC_007514.1 1532858 1533700 R metal-dependent hydrolase complement(1532858..1533700) Chlorobium chlorochromatii CaD3 3747856 YP_379444.1 CDS Cag_1139 NC_007514.1 1533911 1535188 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1533911..1535188 Chlorobium chlorochromatii CaD3 3747857 YP_379445.1 CDS Cag_1140 NC_007514.1 1535185 1535667 D hypothetical protein 1535185..1535667 Chlorobium chlorochromatii CaD3 3747858 YP_379446.1 CDS Cag_1141 NC_007514.1 1535671 1536489 D hypothetical protein 1535671..1536489 Chlorobium chlorochromatii CaD3 3747859 YP_379447.1 CDS Cag_1142 NC_007514.1 1536687 1539425 R ATPase, E1-E2 type complement(1536687..1539425) Chlorobium chlorochromatii CaD3 3747860 YP_379448.1 CDS Cag_1143 NC_007514.1 1539725 1540720 R cation efflux protein complement(1539725..1540720) Chlorobium chlorochromatii CaD3 3747861 YP_379449.1 CDS Cag_1144 NC_007514.1 1540744 1541043 R hypothetical protein complement(1540744..1541043) Chlorobium chlorochromatii CaD3 3747862 YP_379450.1 CDS Cag_1145 NC_007514.1 1541263 1541841 D hypothetical protein 1541263..1541841 Chlorobium chlorochromatii CaD3 3747863 YP_379451.1 CDS Cag_1146 NC_007514.1 1541849 1543129 D hypothetical protein 1541849..1543129 Chlorobium chlorochromatii CaD3 3747864 YP_379452.1 CDS Cag_1147 NC_007514.1 1543244 1543588 D hypothetical protein 1543244..1543588 Chlorobium chlorochromatii CaD3 3747865 YP_379453.1 CDS Cag_1148 NC_007514.1 1543585 1544016 D hypothetical protein 1543585..1544016 Chlorobium chlorochromatii CaD3 3747866 YP_379454.1 CDS Cag_1149 NC_007514.1 1544112 1544648 D hypothetical protein 1544112..1544648 Chlorobium chlorochromatii CaD3 3747867 YP_379455.1 CDS Cag_1150 NC_007514.1 1544881 1545210 D thioredoxin 1544881..1545210 Chlorobium chlorochromatii CaD3 3747868 YP_379456.1 CDS Cag_1151 NC_007514.1 1545306 1546241 D thioredoxin reductase 1545306..1546241 Chlorobium chlorochromatii CaD3 3747870 YP_379457.1 CDS Cag_1152 NC_007514.1 1546349 1547050 D OmpA family protein 1546349..1547050 Chlorobium chlorochromatii CaD3 3747871 YP_379458.1 CDS Cag_1153 NC_007514.1 1547279 1547674 D hypothetical protein 1547279..1547674 Chlorobium chlorochromatii CaD3 3747872 YP_379459.1 CDS Cag_1154 NC_007514.1 1547669 1548748 R UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD complement(1547669..1548748) Chlorobium chlorochromatii CaD3 3747873 YP_379460.1 CDS Cag_1155 NC_007514.1 1549089 1550060 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1549089..1550060 Chlorobium chlorochromatii CaD3 3747911 YP_379461.1 CDS Cag_1156 NC_007514.1 1550095 1550682 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1550095..1550682 Chlorobium chlorochromatii CaD3 3747912 YP_379462.1 CDS Cag_1157 NC_007514.1 1550847 1552268 D peptide ABC transporter permease 1550847..1552268 Chlorobium chlorochromatii CaD3 3747913 YP_379463.1 CDS Cag_1158 NC_007514.1 1552288 1552566 D hypothetical protein 1552288..1552566 Chlorobium chlorochromatii CaD3 3747914 YP_379464.1 CDS Cag_1159 NC_007514.1 1552616 1554211 R L-aspartate oxidase complement(1552616..1554211) Chlorobium chlorochromatii CaD3 3747915 YP_379465.1 CDS Cag_1160 NC_007514.1 1554335 1554880 R PvlArgDC; converts arginine to agmatine and carbon dioxide; has a role in polyamine metabolism; in Methanococcus jannaschii this enzyme self-cleaves at serine-serine bond to form alpha (N-terminal) and beta (C-terminal) subunits; the alpha subunit contains a catalytically active pyruvoyl group; the beta subunit contains the substrate-binding residues; forms homotrimers of the alpha/beta complex; pyruvoyl-dependent arginine decarboxylase complement(1554335..1554880) Chlorobium chlorochromatii CaD3 3747916 YP_379466.1 CDS Cag_1161 NC_007514.1 1555089 1556297 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(1555089..1556297) Chlorobium chlorochromatii CaD3 3747917 YP_379467.1 CDS smpB NC_007514.1 1556294 1556767 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(1556294..1556767) Chlorobium chlorochromatii CaD3 3747918 YP_379468.1 CDS Cag_1163 NC_007514.1 1557074 1558570 R oxidoreductase, FAD-binding complement(1557074..1558570) Chlorobium chlorochromatii CaD3 3747919 YP_379469.1 CDS Cag_1164 NC_007514.1 1558567 1560510 R penicillin-binding protein 2 complement(1558567..1560510) Chlorobium chlorochromatii CaD3 3747920 YP_379470.1 CDS Cag_1165 NC_007514.1 1560540 1561034 R hypothetical protein complement(1560540..1561034) Chlorobium chlorochromatii CaD3 3747921 YP_379471.1 CDS Cag_1166 NC_007514.1 1561050 1561901 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1561050..1561901) Chlorobium chlorochromatii CaD3 3747922 YP_379472.1 CDS Cag_1167 NC_007514.1 1562000 1562389 D chaperonin, 10 kDa 1562000..1562389 Chlorobium chlorochromatii CaD3 3747923 YP_379473.1 CDS Cag_1168 NC_007514.1 1562460 1563419 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1562460..1563419 Chlorobium chlorochromatii CaD3 3747924 YP_379474.1 CDS Cag_1169 NC_007514.1 1563540 1564874 D TPR repeat-containing protein 1563540..1564874 Chlorobium chlorochromatii CaD3 3747925 YP_379475.1 CDS Cag_1170 NC_007514.1 1564900 1566063 R hypothetical protein complement(1564900..1566063) Chlorobium chlorochromatii CaD3 3747926 YP_379476.1 CDS Cag_1171 NC_007514.1 1566136 1566858 R carbonic anhydrase complement(1566136..1566858) Chlorobium chlorochromatii CaD3 3747927 YP_379477.1 CDS Cag_1172 NC_007514.1 1566954 1567391 R chlorosome envelope protein I complement(1566954..1567391) Chlorobium chlorochromatii CaD3 3747928 YP_379478.1 CDS Cag_1173 NC_007514.1 1567407 1567877 R hypothetical protein complement(1567407..1567877) Chlorobium chlorochromatii CaD3 3747929 YP_379479.1 CDS Cag_1174 NC_007514.1 1567867 1569162 R GTP-binding protein HflX complement(1567867..1569162) Chlorobium chlorochromatii CaD3 3748208 YP_379480.1 CDS Cag_1175 NC_007514.1 1569415 1570365 D phytoene desaturase 1569415..1570365 Chlorobium chlorochromatii CaD3 3748209 YP_379481.1 CDS lysS NC_007514.1 1570430 1571965 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1570430..1571965 Chlorobium chlorochromatii CaD3 3748210 YP_379482.1 CDS Cag_1177 NC_007514.1 1571978 1572460 D hypothetical protein 1571978..1572460 Chlorobium chlorochromatii CaD3 3748211 YP_379483.1 CDS Cag_1178 NC_007514.1 1572450 1572689 D hypothetical protein 1572450..1572689 Chlorobium chlorochromatii CaD3 3748212 YP_379484.1 CDS Cag_1179 NC_007514.1 1572707 1574419 D hypothetical protein 1572707..1574419 Chlorobium chlorochromatii CaD3 3748213 YP_379485.1 CDS Cag_1180 NC_007514.1 1574424 1574735 D hypothetical protein 1574424..1574735 Chlorobium chlorochromatii CaD3 3748214 YP_379486.1 CDS Cag_1181 NC_007514.1 1574737 1574994 D hypothetical protein 1574737..1574994 Chlorobium chlorochromatii CaD3 3748215 YP_379487.1 CDS Cag_1182 NC_007514.1 1575023 1576036 R capsular polysaccharide biosynthesis protein I complement(1575023..1576036) Chlorobium chlorochromatii CaD3 3748216 YP_379488.1 CDS Cag_1183 NC_007514.1 1576315 1577763 D hypothetical protein 1576315..1577763 Chlorobium chlorochromatii CaD3 3748217 YP_379489.1 CDS Cag_1184 NC_007514.1 1577808 1578881 D hypothetical protein 1577808..1578881 Chlorobium chlorochromatii CaD3 3748218 YP_379490.1 CDS Cag_1185 NC_007514.1 1578904 1579722 D transglutaminase-like 1578904..1579722 Chlorobium chlorochromatii CaD3 3748219 YP_379491.1 CDS Cag_1186 NC_007514.1 1579835 1580833 D hypothetical protein 1579835..1580833 Chlorobium chlorochromatii CaD3 3748220 YP_379492.1 CDS Cag_1187 NC_007514.1 1580886 1581944 R cytochrome c551 peroxidase complement(1580886..1581944) Chlorobium chlorochromatii CaD3 3748221 YP_379493.1 CDS Cag_1188 NC_007514.1 1582340 1583725 R phytoene desaturase complement(1582340..1583725) Chlorobium chlorochromatii CaD3 3748222 YP_379494.1 CDS recR NC_007514.1 1583846 1584460 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(1583846..1584460) Chlorobium chlorochromatii CaD3 3748223 YP_379495.1 CDS Cag_1190 NC_007514.1 1584468 1584803 R hypothetical protein complement(1584468..1584803) Chlorobium chlorochromatii CaD3 3748224 YP_379496.1 CDS Cag_1191 NC_007514.1 1584910 1585443 R hypothetical protein complement(1584910..1585443) Chlorobium chlorochromatii CaD3 3748225 YP_379497.1 CDS Cag_1192 NC_007514.1 1585510 1586493 R transketolase-like complement(1585510..1586493) Chlorobium chlorochromatii CaD3 3748226 YP_379498.1 CDS ksgA NC_007514.1 1586589 1587380 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1586589..1587380 Chlorobium chlorochromatii CaD3 3748227 YP_379499.1 CDS Cag_1194 NC_007514.1 1587393 1588502 R XRE family transcriptional regulator complement(1587393..1588502) Chlorobium chlorochromatii CaD3 3748228 YP_379500.1 CDS Cag_1195 NC_007514.1 1588515 1588850 R killer suppression protein HigA complement(1588515..1588850) Chlorobium chlorochromatii CaD3 3748229 YP_379501.1 CDS Cag_1196 NC_007514.1 1589213 1592392 D adenine-specific DNA methyltransferase 1589213..1592392 Chlorobium chlorochromatii CaD3 3748230 YP_379502.1 CDS Cag_1197 NC_007514.1 1592499 1592753 D hypothetical protein 1592499..1592753 Chlorobium chlorochromatii CaD3 3748231 YP_379503.1 CDS Cag_1198 NC_007514.1 1592849 1594327 R RND efflux system outer membrane lipoprotein NodT complement(1592849..1594327) Chlorobium chlorochromatii CaD3 3748232 YP_379504.1 CDS Cag_1199 NC_007514.1 1594402 1595328 R hypothetical protein complement(1594402..1595328) Chlorobium chlorochromatii CaD3 3748233 YP_379505.1 CDS Cag_1200 NC_007514.1 1595325 1596146 R hypothetical protein complement(1595325..1596146) Chlorobium chlorochromatii CaD3 3748234 YP_379506.1 CDS Cag_1201 NC_007514.1 1596417 1596779 D hypothetical protein 1596417..1596779 Chlorobium chlorochromatii CaD3 3748235 YP_379507.1 CDS Cag_1202 NC_007514.1 1596808 1597431 D hypothetical protein 1596808..1597431 Chlorobium chlorochromatii CaD3 3748236 YP_379508.1 CDS Cag_1203 NC_007514.1 1597682 1600849 R hydrophobe/amphiphile efflux-1 HAE1 complement(1597682..1600849) Chlorobium chlorochromatii CaD3 3748237 YP_379509.1 CDS Cag_1204 NC_007514.1 1600889 1602076 R secretion protein HlyD complement(1600889..1602076) Chlorobium chlorochromatii CaD3 3748238 YP_379510.1 CDS Cag_1205 NC_007514.1 1602203 1604353 R Na+/H+ anti-porter complement(1602203..1604353) Chlorobium chlorochromatii CaD3 3748239 YP_379511.1 CDS Cag_1206 NC_007514.1 1604935 1606008 D homoserine O-acetyltransferase 1604935..1606008 Chlorobium chlorochromatii CaD3 3748240 YP_379512.1 CDS Cag_1207 NC_007514.1 1606040 1606504 D hypothetical protein 1606040..1606504 Chlorobium chlorochromatii CaD3 3748241 YP_379513.1 CDS Cag_1208 NC_007514.1 1606508 1607524 D pyridoxal phosphate biosynthetic protein PdxA 1606508..1607524 Chlorobium chlorochromatii CaD3 3748242 YP_379514.1 CDS Cag_1209 NC_007514.1 1607777 1609870 R PpiC-type peptidyl-prolyl cis-trans isomerase complement(1607777..1609870) Chlorobium chlorochromatii CaD3 3748243 YP_379515.1 CDS Cag_1210 NC_007514.1 1609943 1610212 R hypothetical protein complement(1609943..1610212) Chlorobium chlorochromatii CaD3 3748244 YP_379516.1 CDS Cag_1211 NC_007514.1 1610273 1610842 D hypothetical protein 1610273..1610842 Chlorobium chlorochromatii CaD3 3748245 YP_379517.1 CDS Cag_1212 NC_007514.1 1611112 1612065 R cell division transporter substrate-binding protein FtsY complement(1611112..1612065) Chlorobium chlorochromatii CaD3 3748246 YP_379518.1 CDS Cag_1213 NC_007514.1 1612181 1613290 D thiamine-monophosphate kinase 1612181..1613290 Chlorobium chlorochromatii CaD3 3748247 YP_379519.1 CDS Cag_1214 NC_007514.1 1613701 1613985 R hypothetical protein complement(1613701..1613985) Chlorobium chlorochromatii CaD3 3748248 YP_379520.1 CDS Cag_1215 NC_007514.1 1614212 1614994 D hypothetical protein 1614212..1614994 Chlorobium chlorochromatii CaD3 3748249 YP_379521.1 CDS Cag_1216 NC_007514.1 1615108 1615470 R hypothetical protein complement(1615108..1615470) Chlorobium chlorochromatii CaD3 3748250 YP_379522.1 CDS Cag_1217 NC_007514.1 1615678 1616184 D hypothetical protein 1615678..1616184 Chlorobium chlorochromatii CaD3 3748251 YP_379523.1 CDS Cag_1218 NC_007514.1 1616227 1617027 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 1616227..1617027 Chlorobium chlorochromatii CaD3 3748252 YP_379524.1 CDS aroB NC_007514.1 1617127 1618224 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1617127..1618224) Chlorobium chlorochromatii CaD3 3748253 YP_379525.1 CDS aroK NC_007514.1 1618311 1618883 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(1618311..1618883) Chlorobium chlorochromatii CaD3 3748254 YP_379526.1 CDS Cag_1221 NC_007514.1 1619191 1620375 R transcriptional regulator complement(1619191..1620375) Chlorobium chlorochromatii CaD3 3748255 YP_379527.1 CDS Cag_1222 NC_007514.1 1620671 1622464 D methylmalonyl-CoA mutase N-terminal domain-containing protein 1620671..1622464 Chlorobium chlorochromatii CaD3 3748256 YP_379528.1 CDS Cag_1223 NC_007514.1 1622461 1624599 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 1622461..1624599 Chlorobium chlorochromatii CaD3 3748257 YP_379529.1 CDS Cag_1224 NC_007514.1 1624902 1627139 R hypothetical protein complement(1624902..1627139) Chlorobium chlorochromatii CaD3 3748258 YP_379530.1 CDS Cag_1226 NC_007514.1 1627859 1629013 D hypothetical protein 1627859..1629013 Chlorobium chlorochromatii CaD3 3748259 YP_379531.1 CDS Cag_1227 NC_007514.1 1629010 1629291 D hypothetical protein 1629010..1629291 Chlorobium chlorochromatii CaD3 3748260 YP_379532.1 CDS Cag_1228 NC_007514.1 1629314 1630963 R Fis family transcriptional regulator complement(1629314..1630963) Chlorobium chlorochromatii CaD3 3748261 YP_379533.1 CDS Cag_1229 NC_007514.1 1631078 1632223 R homocitrate synthase complement(1631078..1632223) Chlorobium chlorochromatii CaD3 3748262 YP_379534.1 CDS Cag_1230 NC_007514.1 1632539 1633384 D molybdenum-pterin binding protein 1632539..1633384 Chlorobium chlorochromatii CaD3 3748263 YP_379535.1 CDS Cag_1231 NC_007514.1 1633438 1633710 R hypothetical protein complement(1633438..1633710) Chlorobium chlorochromatii CaD3 3748264 YP_379536.1 CDS Cag_1232 NC_007514.1 1634163 1635113 D aldo/keto reductase 1634163..1635113 Chlorobium chlorochromatii CaD3 3748265 YP_379537.1 CDS Cag_1233 NC_007514.1 1635128 1635892 D hypothetical protein 1635128..1635892 Chlorobium chlorochromatii CaD3 3748266 YP_379538.1 CDS Cag_1234 NC_007514.1 1635904 1636362 D universal stress protein 1635904..1636362 Chlorobium chlorochromatii CaD3 3748267 YP_379539.1 CDS Cag_1235 NC_007514.1 1636866 1642940 D hypothetical protein 1636866..1642940 Chlorobium chlorochromatii CaD3 3748268 YP_379540.1 CDS Cag_1236 NC_007514.1 1643076 1643783 D hypothetical protein 1643076..1643783 Chlorobium chlorochromatii CaD3 3748269 YP_379541.1 CDS Cag_1237 NC_007514.1 1643795 1644805 R functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase complement(1643795..1644805) Chlorobium chlorochromatii CaD3 3748270 YP_379542.1 CDS Cag_1238 NC_007514.1 1644888 1645400 R hypothetical protein complement(1644888..1645400) Chlorobium chlorochromatii CaD3 3748271 YP_379543.1 CDS Cag_1239 NC_007514.1 1645671 1653056 R hypothetical protein complement(1645671..1653056) Chlorobium chlorochromatii CaD3 3748272 YP_379544.1 CDS Cag_1240 NC_007514.1 1653350 1654354 R hypothetical protein complement(1653350..1654354) Chlorobium chlorochromatii CaD3 3748273 YP_379545.1 CDS Cag_1241 NC_007514.1 1654521 1656080 R hypothetical protein complement(1654521..1656080) Chlorobium chlorochromatii CaD3 3748274 YP_379546.1 CDS Cag_1242 NC_007514.1 1656265 1705200 R hypothetical protein complement(1656265..1705200) Chlorobium chlorochromatii CaD3 3748275 YP_379547.1 CDS Cag_1243 NC_007514.1 1705687 1706619 D hypothetical protein 1705687..1706619 Chlorobium chlorochromatii CaD3 3748281 YP_379548.1 CDS nifH NC_007514.1 1707194 1708018 D nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; nitrogenase reductase 1707194..1708018 Chlorobium chlorochromatii CaD3 3748282 YP_379549.1 CDS Cag_1245 NC_007514.1 1708036 1708389 D nitrogen regulatory protein P-II (GlnB, GlnK) 1708036..1708389 Chlorobium chlorochromatii CaD3 3748283 YP_379550.1 CDS Cag_1246 NC_007514.1 1708390 1708767 D nitrogen regulatory protein P-II (GlnB, GlnK) 1708390..1708767 Chlorobium chlorochromatii CaD3 3748284 YP_379551.1 CDS Cag_1247 NC_007514.1 1708852 1710486 D nitrogenase molybdenum-iron protein alpha chain 1708852..1710486 Chlorobium chlorochromatii CaD3 3748285 YP_379552.1 CDS Cag_1248 NC_007514.1 1710520 1711977 D nitrogenase molybdenum-iron protein beta chain 1710520..1711977 Chlorobium chlorochromatii CaD3 3748286 YP_379553.1 CDS Cag_1249 NC_007514.1 1712231 1713592 D nitrogenase MoFe cofactor biosynthesis protein NifE 1712231..1713592 Chlorobium chlorochromatii CaD3 3748287 YP_379554.1 CDS Cag_1250 NC_007514.1 1713589 1714947 D nitrogenase iron-molybdenum cofactor biosynthesis protein NifN 1713589..1714947 Chlorobium chlorochromatii CaD3 3748288 YP_379555.1 CDS Cag_1251 NC_007514.1 1714963 1716234 D nitrogenase cofactor biosynthesis protein NifB 1714963..1716234 Chlorobium chlorochromatii CaD3 3748289 YP_379556.1 CDS Cag_1252 NC_007514.1 1716681 1716989 D (2Fe-2S) ferredoxin 1716681..1716989 Chlorobium chlorochromatii CaD3 3748290 YP_379557.1 CDS Cag_1253 NC_007514.1 1717111 1719333 D TonB-dependent receptor 1717111..1719333 Chlorobium chlorochromatii CaD3 3748291 YP_379558.1 CDS Cag_1254 NC_007514.1 1719779 1720444 R hypothetical protein complement(1719779..1720444) Chlorobium chlorochromatii CaD3 3748292 YP_379559.1 CDS Cag_1255 NC_007514.1 1720458 1721726 R peptidoglycan-associated (lipo)protein-like protein complement(1720458..1721726) Chlorobium chlorochromatii CaD3 3748293 YP_379560.1 CDS Cag_1256 NC_007514.1 1721839 1723560 R TPR repeat-containing protein complement(1721839..1723560) Chlorobium chlorochromatii CaD3 3748294 YP_379561.1 CDS Cag_1257 NC_007514.1 1723872 1725146 D O-acetylhomoserine/O-acetylserine sulfhydrylase 1723872..1725146 Chlorobium chlorochromatii CaD3 3748295 YP_379562.1 CDS Cag_1258 NC_007514.1 1725416 1726399 D cysteine synthase K/M/A 1725416..1726399 Chlorobium chlorochromatii CaD3 3748296 YP_379563.1 CDS Cag_1259 NC_007514.1 1726497 1726868 D hypothetical protein 1726497..1726868 Chlorobium chlorochromatii CaD3 3748297 YP_379564.1 CDS Cag_1260 NC_007514.1 1726903 1727466 D XRE family transcriptional regulator 1726903..1727466 Chlorobium chlorochromatii CaD3 3748298 YP_379565.1 CDS Cag_1261 NC_007514.1 1727552 1728442 D serine acetyltransferase 1727552..1728442 Chlorobium chlorochromatii CaD3 3748299 YP_379566.1 CDS Cag_1262 NC_007514.1 1728528 1728770 D hypothetical protein 1728528..1728770 Chlorobium chlorochromatii CaD3 3748300 YP_379567.1 CDS Cag_1263 NC_007514.1 1728823 1729443 D hypothetical protein 1728823..1729443 Chlorobium chlorochromatii CaD3 3748301 YP_379568.1 CDS Cag_1264 NC_007514.1 1729512 1730663 D trans-sulfuration enzyme family protein 1729512..1730663 Chlorobium chlorochromatii CaD3 3748302 YP_379569.1 CDS Cag_1265 NC_007514.1 1730878 1732860 D membrane-located cell surface saccharide acetylase 1730878..1732860 Chlorobium chlorochromatii CaD3 3748303 YP_379570.1 CDS Cag_1266 NC_007514.1 1732968 1733171 D thiamine biosynthesis protein ThiS 1732968..1733171 Chlorobium chlorochromatii CaD3 3748304 YP_379571.1 CDS thiG NC_007514.1 1733220 1733990 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1733220..1733990 Chlorobium chlorochromatii CaD3 3748305 YP_379572.1 CDS thiH NC_007514.1 1733993 1735063 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 1733993..1735063 Chlorobium chlorochromatii CaD3 3748306 YP_379573.1 CDS Cag_1269 NC_007514.1 1735150 1735536 D hypothetical protein 1735150..1735536 Chlorobium chlorochromatii CaD3 3748307 YP_379574.1 CDS Cag_1270 NC_007514.1 1735556 1736302 D thiamine biosynthesis protein ThiF 1735556..1736302 Chlorobium chlorochromatii CaD3 3748308 YP_379575.1 CDS Cag_1271 NC_007514.1 1736327 1736743 R rhodanese-like protein complement(1736327..1736743) Chlorobium chlorochromatii CaD3 3748309 YP_379576.1 CDS Cag_1272 NC_007514.1 1736883 1737122 D hypothetical protein 1736883..1737122 Chlorobium chlorochromatii CaD3 3748310 YP_379577.1 CDS Cag_1273 NC_007514.1 1737133 1737636 D hypothetical protein 1737133..1737636 Chlorobium chlorochromatii CaD3 3748311 YP_379578.1 CDS Cag_1274 NC_007514.1 1737738 1737998 D XRE family transcriptional regulator 1737738..1737998 Chlorobium chlorochromatii CaD3 3748312 YP_379579.1 CDS Cag_1275 NC_007514.1 1737991 1739268 D hypothetical protein 1737991..1739268 Chlorobium chlorochromatii CaD3 3748313 YP_379580.1 CDS Cag_1276 NC_007514.1 1739311 1740747 D dihydrolipoamide dehydrogenase 1739311..1740747 Chlorobium chlorochromatii CaD3 3748314 YP_379581.1 CDS Cag_1277 NC_007514.1 1741184 1741372 R hypothetical protein complement(1741184..1741372) Chlorobium chlorochromatii CaD3 3748315 YP_379582.1 CDS Cag_1278 NC_007514.1 1741615 1742211 D hypothetical protein 1741615..1742211 Chlorobium chlorochromatii CaD3 3748316 YP_379583.1 CDS nadE NC_007514.1 1743376 1744206 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(1743376..1744206) Chlorobium chlorochromatii CaD3 3748317 YP_379584.1 CDS Cag_1280 NC_007514.1 1744216 1744770 R hypothetical protein complement(1744216..1744770) Chlorobium chlorochromatii CaD3 3748318 YP_379585.1 CDS Cag_1281 NC_007514.1 1744799 1746310 R membrane-bound metallopeptidase-like protein complement(1744799..1746310) Chlorobium chlorochromatii CaD3 3748319 YP_379586.1 CDS Cag_1282 NC_007514.1 1746629 1747900 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1746629..1747900 Chlorobium chlorochromatii CaD3 3747431 YP_379587.1 CDS Cag_1283 NC_007514.1 1748041 1748412 R hypothetical protein complement(1748041..1748412) Chlorobium chlorochromatii CaD3 3747432 YP_379588.1 CDS Cag_1284 NC_007514.1 1748442 1748774 R hypothetical protein complement(1748442..1748774) Chlorobium chlorochromatii CaD3 3747433 YP_379589.1 CDS Cag_1285 NC_007514.1 1749610 1749903 R hypothetical protein complement(1749610..1749903) Chlorobium chlorochromatii CaD3 3747434 YP_379590.1 CDS Cag_1286 NC_007514.1 1749962 1752529 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(1749962..1752529) Chlorobium chlorochromatii CaD3 3747435 YP_379591.1 CDS Cag_1287 NC_007514.1 1752645 1752908 D hypothetical protein 1752645..1752908 Chlorobium chlorochromatii CaD3 3747436 YP_379592.1 CDS Cag_1288 NC_007514.1 1752971 1753996 R S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(1752971..1753996) Chlorobium chlorochromatii CaD3 3747437 YP_379593.1 CDS hisD NC_007514.1 1754009 1755295 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(1754009..1755295) Chlorobium chlorochromatii CaD3 3747438 YP_379594.1 CDS Cag_1290 NC_007514.1 1755473 1756501 D rod shape-determining protein MreB 1755473..1756501 Chlorobium chlorochromatii CaD3 3747439 YP_379595.1 CDS Cag_1291 NC_007514.1 1756524 1756814 D hypothetical protein 1756524..1756814 Chlorobium chlorochromatii CaD3 3747440 YP_379596.1 CDS Cag_1292 NC_007514.1 1756796 1757203 D hypothetical protein 1756796..1757203 Chlorobium chlorochromatii CaD3 3747441 YP_379597.1 CDS Cag_1294 NC_007514.1 1757917 1759056 R glycosyl transferase complement(1757917..1759056) Chlorobium chlorochromatii CaD3 3747442 YP_379598.1 CDS Cag_1295 NC_007514.1 1759135 1759719 R MCBG protein (microcin resistance protein)-like protein complement(1759135..1759719) Chlorobium chlorochromatii CaD3 3747443 YP_379599.1 CDS Cag_1296 NC_007514.1 1759852 1760805 D hypothetical protein 1759852..1760805 Chlorobium chlorochromatii CaD3 3747444 YP_379600.1 CDS Cag_1297 NC_007514.1 1761182 1762381 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1761182..1762381) Chlorobium chlorochromatii CaD3 3747445 YP_379601.1 CDS Cag_1298 NC_007514.1 1762589 1765150 D hypothetical protein 1762589..1765150 Chlorobium chlorochromatii CaD3 3747446 YP_379602.1 CDS Cag_1299 NC_007514.1 1765147 1766013 R dihydrolipoamide acetyltransferase complement(1765147..1766013) Chlorobium chlorochromatii CaD3 3747447 YP_379603.1 CDS Cag_1300 NC_007514.1 1766153 1766713 D hypothetical protein 1766153..1766713 Chlorobium chlorochromatii CaD3 3747448 YP_379604.1 CDS Cag_1301 NC_007514.1 1766885 1769713 D excinuclease ABC subunit A 1766885..1769713 Chlorobium chlorochromatii CaD3 3747449 YP_379605.1 CDS Cag_1302 NC_007514.1 1769809 1771068 D ATPase-like protein 1769809..1771068 Chlorobium chlorochromatii CaD3 3747391 YP_379606.1 CDS Cag_1303 NC_007514.1 1771065 1771571 D hypothetical protein 1771065..1771571 Chlorobium chlorochromatii CaD3 3747392 YP_379607.1 CDS Cag_1304 NC_007514.1 1771601 1771909 R hypothetical protein complement(1771601..1771909) Chlorobium chlorochromatii CaD3 3747393 YP_379608.2 CDS groES NC_007514.1 1772111 1772395 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1772111..1772395 Chlorobium chlorochromatii CaD3 3747394 YP_379609.1 CDS groEL NC_007514.1 1772444 1774087 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 1772444..1774087 Chlorobium chlorochromatii CaD3 3747395 YP_379610.1 CDS Cag_1307 NC_007514.1 1774268 1774615 D hypothetical protein 1774268..1774615 Chlorobium chlorochromatii CaD3 3747396 YP_379611.1 CDS Cag_1308 NC_007514.1 1774629 1774976 D hypothetical protein 1774629..1774976 Chlorobium chlorochromatii CaD3 3747397 YP_379612.1 CDS Cag_1309 NC_007514.1 1775083 1777884 D methylase 1775083..1777884 Chlorobium chlorochromatii CaD3 3747398 YP_379613.1 CDS Cag_1310 NC_007514.1 1777911 1778585 D HNH nuclease 1777911..1778585 Chlorobium chlorochromatii CaD3 3747399 YP_379614.1 CDS Cag_1311 NC_007514.1 1778637 1778873 D hypothetical protein 1778637..1778873 Chlorobium chlorochromatii CaD3 3747400 YP_379615.1 CDS Cag_1312 NC_007514.1 1779270 1779521 D hypothetical protein 1779270..1779521 Chlorobium chlorochromatii CaD3 3747401 YP_379616.1 CDS Cag_1313 NC_007514.1 1779678 1780334 D exoenzyme S synthesis protein B 1779678..1780334 Chlorobium chlorochromatii CaD3 3747402 YP_379617.1 CDS Cag_1314 NC_007514.1 1780430 1781119 D hypothetical protein 1780430..1781119 Chlorobium chlorochromatii CaD3 3747403 YP_379618.1 CDS trpA NC_007514.1 1781123 1781926 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1781123..1781926 Chlorobium chlorochromatii CaD3 3747404 YP_379619.1 CDS Cag_1316 NC_007514.1 1781942 1783018 D glycosyl transferase 1781942..1783018 Chlorobium chlorochromatii CaD3 3747405 YP_379620.1 CDS Cag_1317 NC_007514.1 1783423 1786044 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1783423..1786044 Chlorobium chlorochromatii CaD3 3747406 YP_379621.1 CDS Cag_1318 NC_007514.1 1786282 1786515 D hypothetical protein 1786282..1786515 Chlorobium chlorochromatii CaD3 3747407 YP_379622.1 CDS Cag_1319 NC_007514.1 1786512 1786865 D transcriptional modulator of MazE/toxin, MazF 1786512..1786865 Chlorobium chlorochromatii CaD3 3747408 YP_379623.1 CDS Cag_1320 NC_007514.1 1787030 1788448 D Elongator protein 3/MiaB/NifB 1787030..1788448 Chlorobium chlorochromatii CaD3 3747409 YP_379624.1 CDS Cag_1321 NC_007514.1 1788995 1789543 R hypothetical protein complement(1788995..1789543) Chlorobium chlorochromatii CaD3 3747410 YP_379625.1 CDS Cag_1322 NC_007514.1 1789662 1789967 R hypothetical protein complement(1789662..1789967) Chlorobium chlorochromatii CaD3 3746603 YP_379626.1 CDS Cag_1323 NC_007514.1 1789964 1790200 R hypothetical protein complement(1789964..1790200) Chlorobium chlorochromatii CaD3 3746604 YP_379627.1 CDS Cag_1324 NC_007514.1 1791517 1791750 D hypothetical protein 1791517..1791750 Chlorobium chlorochromatii CaD3 3746605 YP_379628.1 CDS Cag_1325 NC_007514.1 1791751 1792152 D nucleic acid binding protein 1791751..1792152 Chlorobium chlorochromatii CaD3 3746606 YP_379629.1 CDS Cag_1326 NC_007514.1 1792412 1792825 D peptidyl-tRNA hydrolase domain-containing protein 1792412..1792825 Chlorobium chlorochromatii CaD3 3746607 YP_379630.1 CDS Cag_1327 NC_007514.1 1792836 1794650 R ATPase complement(1792836..1794650) Chlorobium chlorochromatii CaD3 3746608 YP_379631.1 CDS Cag_1328 NC_007514.1 1794684 1795112 D MerR family transcriptional regulator 1794684..1795112 Chlorobium chlorochromatii CaD3 3746609 YP_379632.1 CDS Cag_1329 NC_007514.1 1795246 1796346 R bacteriochlorophyll A protein complement(1795246..1796346) Chlorobium chlorochromatii CaD3 3746610 YP_379633.1 CDS Cag_1330 NC_007514.1 1796607 1798166 D apolipoprotein N-acyltransferase 1796607..1798166 Chlorobium chlorochromatii CaD3 3746611 YP_379634.1 CDS Cag_1331 NC_007514.1 1798169 1799416 R Fis family transcriptional regulator complement(1798169..1799416) Chlorobium chlorochromatii CaD3 3746612 YP_379635.1 CDS Cag_1332 NC_007514.1 1799441 1800175 R hypothetical protein complement(1799441..1800175) Chlorobium chlorochromatii CaD3 3746614 YP_379636.1 CDS Cag_1333 NC_007514.1 1800320 1801186 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1800320..1801186 Chlorobium chlorochromatii CaD3 3746615 YP_379637.1 CDS pyrB NC_007514.1 1801448 1802383 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 1801448..1802383 Chlorobium chlorochromatii CaD3 3746616 YP_379638.1 CDS Cag_1335 NC_007514.1 1802451 1803320 D hypothetical protein 1802451..1803320 Chlorobium chlorochromatii CaD3 3746617 YP_379639.1 CDS Cag_1336 NC_007514.1 1803473 1804423 D hypothetical protein 1803473..1804423 Chlorobium chlorochromatii CaD3 3746618 YP_379640.1 CDS Cag_1337 NC_007514.1 1804911 1805963 D hypothetical protein 1804911..1805963 Chlorobium chlorochromatii CaD3 3746619 YP_379641.1 CDS Cag_1338 NC_007514.1 1806432 1806869 D universal stress protein 1806432..1806869 Chlorobium chlorochromatii CaD3 3746620 YP_379642.1 CDS Cag_1339 NC_007514.1 1806943 1808520 D sugar transport protein 1806943..1808520 Chlorobium chlorochromatii CaD3 3746854 YP_379643.1 CDS Cag_1340 NC_007514.1 1808550 1808774 D hypothetical protein 1808550..1808774 Chlorobium chlorochromatii CaD3 3746855 YP_379644.1 CDS uvrC NC_007514.1 1808936 1810825 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1808936..1810825 Chlorobium chlorochromatii CaD3 3746856 YP_379645.1 CDS Cag_1342 NC_007514.1 1810831 1811034 R hypothetical protein complement(1810831..1811034) Chlorobium chlorochromatii CaD3 3746857 YP_379646.1 CDS Cag_1343 NC_007514.1 1811021 1811509 R hypothetical protein complement(1811021..1811509) Chlorobium chlorochromatii CaD3 3746858 YP_379647.1 CDS Cag_1344 NC_007514.1 1811730 1813145 D TPR repeat-containing protein 1811730..1813145 Chlorobium chlorochromatii CaD3 3746859 YP_379648.1 CDS Cag_1345 NC_007514.1 1813138 1814001 D quinate/shikimate 5-dehydrogenase 1813138..1814001 Chlorobium chlorochromatii CaD3 3746860 YP_379649.1 CDS Cag_1346 NC_007514.1 1814035 1814526 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1814035..1814526 Chlorobium chlorochromatii CaD3 3746861 YP_379650.1 CDS Cag_1347 NC_007514.1 1814533 1815339 D TatD-related deoxyribonuclease 1814533..1815339 Chlorobium chlorochromatii CaD3 3746862 YP_379651.1 CDS Cag_1348 NC_007514.1 1815781 1816446 D TPR repeat-containing protein 1815781..1816446 Chlorobium chlorochromatii CaD3 3746863 YP_379652.1 CDS Cag_1349 NC_007514.1 1816498 1816986 D cyclophilin type peptidyl-prolyl cis-trans isomerase 1816498..1816986 Chlorobium chlorochromatii CaD3 3746864 YP_379653.1 CDS Cag_1350 NC_007514.1 1816996 1817685 D hypothetical protein 1816996..1817685 Chlorobium chlorochromatii CaD3 3746865 YP_379654.1 CDS Cag_1351 NC_007514.1 1817780 1818601 D catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 1817780..1818601 Chlorobium chlorochromatii CaD3 3746866 YP_379655.1 CDS Cag_1352 NC_007514.1 1818881 1819384 D hypothetical protein 1818881..1819384 Chlorobium chlorochromatii CaD3 3746867 YP_379656.1 CDS Cag_1353 NC_007514.1 1819545 1819850 D hypothetical protein 1819545..1819850 Chlorobium chlorochromatii CaD3 3746868 YP_379657.1 CDS Cag_1354 NC_007514.1 1819847 1820293 D nucleic acid binding protein 1819847..1820293 Chlorobium chlorochromatii CaD3 3746869 YP_379658.1 CDS Cag_1355 NC_007514.1 1820661 1821791 D initiation factor 2B alpha/beta/delta 1820661..1821791 Chlorobium chlorochromatii CaD3 3746870 YP_379659.1 CDS Cag_1356 NC_007514.1 1821951 1823339 D cytochrome-cbb3 oxidase, subunit I 1821951..1823339 Chlorobium chlorochromatii CaD3 3746871 YP_379660.1 CDS Cag_1357 NC_007514.1 1823368 1824039 D CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1823368..1824039 Chlorobium chlorochromatii CaD3 3746872 YP_379661.1 CDS Cag_1358 NC_007514.1 1824338 1824796 D cb-type cytochrome c oxidase subunit III 1824338..1824796 Chlorobium chlorochromatii CaD3 3746873 YP_379662.1 CDS Cag_1359 NC_007514.1 1825127 1826272 D polyferredoxin-like 1825127..1826272 Chlorobium chlorochromatii CaD3 3747622 YP_379663.1 CDS Cag_1360 NC_007514.1 1826517 1826786 D hypothetical protein 1826517..1826786 Chlorobium chlorochromatii CaD3 3747623 YP_379664.1 CDS Cag_1361 NC_007514.1 1826797 1827078 D hypothetical protein 1826797..1827078 Chlorobium chlorochromatii CaD3 3747624 YP_379665.1 CDS Cag_1362 NC_007514.1 1827214 1828149 D hypothetical protein 1827214..1828149 Chlorobium chlorochromatii CaD3 3747625 YP_379666.1 CDS Cag_1363 NC_007514.1 1828351 1829787 D serine/threonine protein kinase 1828351..1829787 Chlorobium chlorochromatii CaD3 3747626 YP_379667.1 CDS Cag_1364 NC_007514.1 1830009 1830230 D hypothetical protein 1830009..1830230 Chlorobium chlorochromatii CaD3 3747627 YP_379668.1 CDS Cag_1367 NC_007514.1 1830859 1831299 D hypothetical protein 1830859..1831299 Chlorobium chlorochromatii CaD3 3747628 YP_379669.1 CDS Cag_1368 NC_007514.1 1831278 1831706 D hypothetical protein 1831278..1831706 Chlorobium chlorochromatii CaD3 3747629 YP_379670.1 CDS Cag_1369 NC_007514.1 1831693 1834137 D heavy metal translocating P-type ATPase 1831693..1834137 Chlorobium chlorochromatii CaD3 3747630 YP_379671.1 CDS Cag_1370 NC_007514.1 1834134 1834298 D cytochrome oxidase maturation protein cbb3-type 1834134..1834298 Chlorobium chlorochromatii CaD3 3747631 YP_379672.1 CDS Cag_1371 NC_007514.1 1834295 1834972 D hypothetical protein 1834295..1834972 Chlorobium chlorochromatii CaD3 3747632 YP_379673.1 CDS Cag_1372 NC_007514.1 1835061 1835729 D hypothetical protein 1835061..1835729 Chlorobium chlorochromatii CaD3 3747633 YP_379674.1 CDS Cag_1373 NC_007514.1 1835886 1836368 D hypothetical protein 1835886..1836368 Chlorobium chlorochromatii CaD3 3747634 YP_379675.1 CDS Cag_1374 NC_007514.1 1836346 1836591 D hypothetical protein 1836346..1836591 Chlorobium chlorochromatii CaD3 3747635 YP_379676.1 CDS Cag_1375 NC_007514.1 1836676 1837815 R hypothetical protein complement(1836676..1837815) Chlorobium chlorochromatii CaD3 3747636 YP_379677.1 CDS Cag_1376 NC_007514.1 1837967 1839019 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1837967..1839019) Chlorobium chlorochromatii CaD3 3747637 YP_379678.1 CDS Cag_1377 NC_007514.1 1839260 1840876 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1839260..1840876 Chlorobium chlorochromatii CaD3 3747638 YP_379679.1 CDS Cag_1378 NC_007514.1 1840971 1842161 R anion-transporting ATPase complement(1840971..1842161) Chlorobium chlorochromatii CaD3 3747639 YP_379680.1 CDS Cag_1379 NC_007514.1 1842366 1844036 R peptidoglycan-binding LysM complement(1842366..1844036) Chlorobium chlorochromatii CaD3 3747640 YP_379681.1 CDS truA NC_007514.1 1844279 1845010 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(1844279..1845010) Chlorobium chlorochromatii CaD3 3746564 YP_379682.1 CDS Cag_1381 NC_007514.1 1845111 1847096 D alpha-amylase 1845111..1847096 Chlorobium chlorochromatii CaD3 3746565 YP_379683.1 CDS Cag_1382 NC_007514.1 1847114 1848025 D carbohydrate kinase 1847114..1848025 Chlorobium chlorochromatii CaD3 3746566 YP_379684.1 CDS Cag_1383 NC_007514.1 1848546 1848830 R hypothetical protein complement(1848546..1848830) Chlorobium chlorochromatii CaD3 3746567 YP_379685.1 CDS Cag_1384 NC_007514.1 1848972 1850738 D sodium:solute symporter family protein 1848972..1850738 Chlorobium chlorochromatii CaD3 3746568 YP_379686.1 CDS Cag_1385 NC_007514.1 1850748 1850954 D hypothetical protein 1850748..1850954 Chlorobium chlorochromatii CaD3 3746569 YP_379687.1 CDS Cag_1386 NC_007514.1 1850935 1851240 D XRE family transcriptional regulator 1850935..1851240 Chlorobium chlorochromatii CaD3 3746570 YP_379688.1 CDS Cag_1387 NC_007514.1 1851699 1853351 D ATP-dependent OLD family endonuclease 1851699..1853351 Chlorobium chlorochromatii CaD3 3746571 YP_379689.1 CDS Cag_1388 NC_007514.1 1853550 1853831 D hypothetical protein 1853550..1853831 Chlorobium chlorochromatii CaD3 3746572 YP_379690.1 CDS Cag_1389 NC_007514.1 1853831 1854208 D nucleic acid binding protein 1853831..1854208 Chlorobium chlorochromatii CaD3 3746573 YP_379691.1 CDS Cag_1390 NC_007514.1 1854223 1854447 D hypothetical protein 1854223..1854447 Chlorobium chlorochromatii CaD3 3746574 YP_379692.1 CDS Cag_1391 NC_007514.1 1854511 1855293 D type II restriction enzyme 1854511..1855293 Chlorobium chlorochromatii CaD3 3746575 YP_379693.1 CDS Cag_1392 NC_007514.1 1855303 1856358 D type II DNA modification methyltransferase 1855303..1856358 Chlorobium chlorochromatii CaD3 3746576 YP_379694.1 CDS Cag_1393 NC_007514.1 1856370 1856960 D Maf-like protein 1856370..1856960 Chlorobium chlorochromatii CaD3 3746577 YP_379695.1 CDS Cag_1394 NC_007514.1 1856960 1857895 D tRNA isopentenyltransferase 1856960..1857895 Chlorobium chlorochromatii CaD3 3746578 YP_379696.1 CDS Cag_1395 NC_007514.1 1858140 1858910 D anti-anti-sigma factor 1858140..1858910 Chlorobium chlorochromatii CaD3 3746579 YP_379697.1 CDS Cag_1396 NC_007514.1 1858973 1860166 R hypothetical protein complement(1858973..1860166) Chlorobium chlorochromatii CaD3 3746580 YP_379698.1 CDS Cag_1397 NC_007514.1 1860226 1860618 R hypothetical protein complement(1860226..1860618) Chlorobium chlorochromatii CaD3 3746581 YP_379699.1 CDS Cag_1398 NC_007514.1 1860768 1862153 R hypothetical protein complement(1860768..1862153) Chlorobium chlorochromatii CaD3 3746582 YP_379700.1 CDS Cag_1399 NC_007514.1 1862226 1863533 D hypothetical protein 1862226..1863533 Chlorobium chlorochromatii CaD3 3746583 YP_379701.1 CDS Cag_1400 NC_007514.1 1863568 1865463 R chloride channel complement(1863568..1865463) Chlorobium chlorochromatii CaD3 3747159 YP_379702.1 CDS Cag_1401 NC_007514.1 1865498 1866283 R hypothetical protein complement(1865498..1866283) Chlorobium chlorochromatii CaD3 3747160 YP_379703.1 CDS Cag_1402 NC_007514.1 1866280 1867074 R DNA modification methylase-like protein complement(1866280..1867074) Chlorobium chlorochromatii CaD3 3747161 YP_379704.1 CDS metG NC_007514.1 1867431 1869548 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1867431..1869548) Chlorobium chlorochromatii CaD3 3747162 YP_379705.1 CDS Cag_1404 NC_007514.1 1869567 1870568 R hypothetical protein complement(1869567..1870568) Chlorobium chlorochromatii CaD3 3747163 YP_379706.1 CDS Cag_1405 NC_007514.1 1870633 1870920 R hypothetical protein complement(1870633..1870920) Chlorobium chlorochromatii CaD3 3747164 YP_379707.1 CDS Cag_1406 NC_007514.1 1870910 1871989 R hypothetical protein complement(1870910..1871989) Chlorobium chlorochromatii CaD3 3747165 YP_379708.1 CDS Cag_1407 NC_007514.1 1872134 1874296 R M50 family peptidase complement(1872134..1874296) Chlorobium chlorochromatii CaD3 3747166 YP_379709.1 CDS Cag_1408 NC_007514.1 1874297 1876192 R membrane-fusion protein-like protein complement(1874297..1876192) Chlorobium chlorochromatii CaD3 3747167 YP_379710.1 CDS Cag_1409 NC_007514.1 1876262 1877200 R membrane-fusion protein-like protein complement(1876262..1877200) Chlorobium chlorochromatii CaD3 3747168 YP_379711.1 CDS Cag_1410 NC_007514.1 1877389 1879614 R isocitrate dehydrogenase NADP-dependent, monomeric type complement(1877389..1879614) Chlorobium chlorochromatii CaD3 3747169 YP_379712.1 CDS Cag_1411 NC_007514.1 1879918 1880796 R enoyl-ACP reductase complement(1879918..1880796) Chlorobium chlorochromatii CaD3 3747170 YP_379713.1 CDS Cag_1412 NC_007514.1 1880924 1882228 R anion-transporting ATPase complement(1880924..1882228) Chlorobium chlorochromatii CaD3 3747171 YP_379714.1 CDS Cag_1413 NC_007514.1 1882375 1882953 R nitroreductase complement(1882375..1882953) Chlorobium chlorochromatii CaD3 3747172 YP_379715.1 CDS Cag_1414 NC_007514.1 1882972 1884003 R hypothetical protein complement(1882972..1884003) Chlorobium chlorochromatii CaD3 3747173 YP_379716.1 CDS Cag_1415 NC_007514.1 1884000 1886231 R DNA helicase II complement(1884000..1886231) Chlorobium chlorochromatii CaD3 3747174 YP_379717.1 CDS Cag_1416 NC_007514.1 1886457 1887902 D alpha amylase 1886457..1887902 Chlorobium chlorochromatii CaD3 3747175 YP_379718.1 CDS Cag_1417 NC_007514.1 1887973 1888398 D hypothetical protein 1887973..1888398 Chlorobium chlorochromatii CaD3 3747176 YP_379719.1 CDS Cag_1418 NC_007514.1 1888413 1888871 R phosphatidylglycerophosphatase A complement(1888413..1888871) Chlorobium chlorochromatii CaD3 3747177 YP_379720.1 CDS Cag_1419 NC_007514.1 1888875 1889495 R CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(1888875..1889495) Chlorobium chlorochromatii CaD3 3746312 YP_379721.1 CDS Cag_1420 NC_007514.1 1889812 1890816 D glyceraldehyde-3-phosphate dehydrogenase, type I 1889812..1890816 Chlorobium chlorochromatii CaD3 3746313 YP_379722.1 CDS Cag_1421 NC_007514.1 1890940 1891386 D hypothetical protein 1890940..1891386 Chlorobium chlorochromatii CaD3 3746314 YP_379723.1 CDS Cag_1422 NC_007514.1 1891468 1892670 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ complement(1891468..1892670) Chlorobium chlorochromatii CaD3 3746315 YP_379724.1 CDS Cag_1423 NC_007514.1 1892703 1893350 R molecular chaperone GrpE (heat shock protein)-like protein complement(1892703..1893350) Chlorobium chlorochromatii CaD3 3746316 YP_379725.1 CDS Cag_1424 NC_007514.1 1893393 1894439 R negative regulator of class I heat shock protein complement(1893393..1894439) Chlorobium chlorochromatii CaD3 3746317 YP_379726.1 CDS Cag_1425 NC_007514.1 1894509 1895402 R modification methylase HemK complement(1894509..1895402) Chlorobium chlorochromatii CaD3 3746318 YP_379727.1 CDS Cag_1427 NC_007514.1 1895741 1896097 D hypothetical protein 1895741..1896097 Chlorobium chlorochromatii CaD3 3746319 YP_379728.1 CDS Cag_1428 NC_007514.1 1896198 1896992 D hypothetical protein 1896198..1896992 Chlorobium chlorochromatii CaD3 3746320 YP_379729.1 CDS Cag_1429 NC_007514.1 1897078 1898421 D cobyrinic acid a,c-diamide synthase CbiA 1897078..1898421 Chlorobium chlorochromatii CaD3 3746321 YP_379730.1 CDS Cag_1430 NC_007514.1 1898866 1900515 D UDP-N-acetylenolpyruvoylglucosamine reductase 1898866..1900515 Chlorobium chlorochromatii CaD3 3746322 YP_379731.1 CDS Cag_1431 NC_007514.1 1900634 1901629 R hypothetical protein complement(1900634..1901629) Chlorobium chlorochromatii CaD3 3746323 YP_379732.1 CDS Cag_1432 NC_007514.1 1901863 1902078 D virulence-associated protein 1901863..1902078 Chlorobium chlorochromatii CaD3 3746324 YP_379733.1 CDS Cag_1433 NC_007514.1 1902062 1902484 D NtrR protein 1902062..1902484 Chlorobium chlorochromatii CaD3 3746325 YP_379734.1 CDS Cag_1434 NC_007514.1 1902822 1903217 D hypothetical protein 1902822..1903217 Chlorobium chlorochromatii CaD3 3746326 YP_379735.1 CDS Cag_1435 NC_007514.1 1903281 1903988 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1903281..1903988 Chlorobium chlorochromatii CaD3 3746327 YP_379736.1 CDS Cag_1436 NC_007514.1 1904014 1904670 D DedA family protein 1904014..1904670 Chlorobium chlorochromatii CaD3 3746328 YP_379737.1 CDS Cag_1437 NC_007514.1 1904809 1905702 D transketolase-like 1904809..1905702 Chlorobium chlorochromatii CaD3 3746329 YP_379738.1 CDS Cag_1438 NC_007514.1 1905723 1906277 D hypothetical protein 1905723..1906277 Chlorobium chlorochromatii CaD3 3746330 YP_379739.1 CDS coaD NC_007514.1 1906274 1906768 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1906274..1906768 Chlorobium chlorochromatii CaD3 3746331 YP_379740.1 CDS Cag_1440 NC_007514.1 1907038 1908237 D aspartate aminotransferase 1907038..1908237 Chlorobium chlorochromatii CaD3 3746639 YP_379741.1 CDS Cag_1441 NC_007514.1 1908495 1909598 R hypothetical protein complement(1908495..1909598) Chlorobium chlorochromatii CaD3 3746640 YP_379742.1 CDS Cag_1443 NC_007514.1 1910580 1911404 R hypothetical protein complement(1910580..1911404) Chlorobium chlorochromatii CaD3 3746641 YP_379743.1 CDS Cag_1444 NC_007514.1 1911515 1912228 D ATPase 1911515..1912228 Chlorobium chlorochromatii CaD3 3746642 YP_379744.1 CDS Cag_1445 NC_007514.1 1912403 1913476 D catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 1912403..1913476 Chlorobium chlorochromatii CaD3 3746643 YP_379745.1 CDS Cag_1446 NC_007514.1 1913488 1914483 D isoprenyl synthetase 1913488..1914483 Chlorobium chlorochromatii CaD3 3746644 YP_379746.1 CDS Cag_1447 NC_007514.1 1914605 1915762 D SMF protein 1914605..1915762 Chlorobium chlorochromatii CaD3 3746645 YP_379747.1 CDS Cag_1448 NC_007514.1 1915969 1916514 D outer membrane protein OmpH 1915969..1916514 Chlorobium chlorochromatii CaD3 3746646 YP_379748.1 CDS Cag_1449 NC_007514.1 1916555 1917067 D hypothetical protein 1916555..1917067 Chlorobium chlorochromatii CaD3 3746647 YP_379749.1 CDS Cag_1450 NC_007514.1 1917121 1917510 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 1917121..1917510 Chlorobium chlorochromatii CaD3 3746648 YP_379750.1 CDS Cag_1451 NC_007514.1 1917526 1918269 D UDP-N-acetylglucosamine pyrophosphorylase 1917526..1918269 Chlorobium chlorochromatii CaD3 3746649 YP_379751.1 CDS Cag_1452 NC_007514.1 1918344 1919669 D hypothetical protein 1918344..1919669 Chlorobium chlorochromatii CaD3 3746650 YP_379752.1 CDS Cag_1453 NC_007514.1 1919771 1921690 D TPR repeat-containing protein 1919771..1921690 Chlorobium chlorochromatii CaD3 3746651 YP_379753.1 CDS Cag_1454 NC_007514.1 1921724 1922224 R glutathione S-transferase, fosfomycin resistance protein complement(1921724..1922224) Chlorobium chlorochromatii CaD3 3746652 YP_379754.1 CDS Cag_1455 NC_007514.1 1922202 1922558 R hypothetical protein complement(1922202..1922558) Chlorobium chlorochromatii CaD3 3746653 YP_379755.1 CDS gmk NC_007514.1 1922567 1923139 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1922567..1923139) Chlorobium chlorochromatii CaD3 3746654 YP_379756.1 CDS Cag_1457 NC_007514.1 1923145 1924032 R hypothetical protein complement(1923145..1924032) Chlorobium chlorochromatii CaD3 3746655 YP_379757.2 CDS rpsO NC_007514.1 1924111 1924380 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(1924111..1924380) Chlorobium chlorochromatii CaD3 3746656 YP_379758.1 CDS Cag_1459 NC_007514.1 1924431 1925393 R riboflavin kinase / FAD synthetase complement(1924431..1925393) Chlorobium chlorochromatii CaD3 3746657 YP_379759.1 CDS Cag_1460 NC_007514.1 1925459 1926226 R tRNA pseudouridine synthase B complement(1925459..1926226) Chlorobium chlorochromatii CaD3 3746429 YP_379760.1 CDS Cag_1461 NC_007514.1 1926296 1926667 R ribosome-binding factor A complement(1926296..1926667) Chlorobium chlorochromatii CaD3 3746430 YP_379761.1 CDS infB NC_007514.1 1926690 1929758 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(1926690..1929758) Chlorobium chlorochromatii CaD3 3746431 YP_379762.1 CDS nusA NC_007514.1 1929886 1931469 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(1929886..1931469) Chlorobium chlorochromatii CaD3 3746432 YP_379763.1 CDS Cag_1464 NC_007514.1 1931513 1932052 R hypothetical protein complement(1931513..1932052) Chlorobium chlorochromatii CaD3 3746433 YP_379764.1 CDS Cag_1465 NC_007514.1 1932363 1932629 R hypothetical protein complement(1932363..1932629) Chlorobium chlorochromatii CaD3 3746434 YP_379765.1 CDS Cag_1466 NC_007514.1 1932630 1932869 R hypothetical protein complement(1932630..1932869) Chlorobium chlorochromatii CaD3 3746435 YP_379766.1 CDS hisS NC_007514.1 1932884 1934161 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1932884..1934161) Chlorobium chlorochromatii CaD3 3746436 YP_379767.1 CDS Cag_1468 NC_007514.1 1934171 1934641 R PTS IIA-like nitrogen-regulatory protein PtsN complement(1934171..1934641) Chlorobium chlorochromatii CaD3 3746437 YP_379768.1 CDS Cag_1469 NC_007514.1 1934892 1935875 R death-on-curing protein complement(1934892..1935875) Chlorobium chlorochromatii CaD3 3746438 YP_379769.1 CDS Cag_1470 NC_007514.1 1935951 1936775 R phosphatidate cytidylyltransferase complement(1935951..1936775) Chlorobium chlorochromatii CaD3 3746439 YP_379770.1 CDS Cag_1471 NC_007514.1 1936812 1937747 R hypothetical protein complement(1936812..1937747) Chlorobium chlorochromatii CaD3 3746440 YP_379771.1 CDS Cag_1472 NC_007514.1 1937960 1939051 D glycosyl transferase 1937960..1939051 Chlorobium chlorochromatii CaD3 3746441 YP_379772.1 CDS Cag_1473 NC_007514.1 1939060 1940211 D hypothetical protein 1939060..1940211 Chlorobium chlorochromatii CaD3 3746442 YP_379773.1 CDS Cag_1474 NC_007514.1 1940244 1941287 D heptosyltransferase 1940244..1941287 Chlorobium chlorochromatii CaD3 3746444 YP_379774.1 CDS Cag_1475 NC_007514.1 1941332 1942405 D glycosyl transferase 1941332..1942405 Chlorobium chlorochromatii CaD3 3746445 YP_379775.1 CDS Cag_1476 NC_007514.1 1942462 1943502 D glycosyl transferase 1942462..1943502 Chlorobium chlorochromatii CaD3 3746446 YP_379776.1 CDS Cag_1477 NC_007514.1 1943519 1944520 R glycosyl transferase complement(1943519..1944520) Chlorobium chlorochromatii CaD3 3746447 YP_379777.1 CDS Cag_1478 NC_007514.1 1944524 1945501 R glycosyl transferase complement(1944524..1945501) Chlorobium chlorochromatii CaD3 3747969 YP_379778.1 CDS Cag_1479 NC_007514.1 1945633 1946556 R cell wall biosynthesis glycosyltransferase-like protein complement(1945633..1946556) Chlorobium chlorochromatii CaD3 3747970 YP_379779.1 CDS Cag_1480 NC_007514.1 1946569 1947132 R acetyltransferase complement(1946569..1947132) Chlorobium chlorochromatii CaD3 3747971 YP_379780.1 CDS Cag_1481 NC_007514.1 1947129 1950488 R glycosyltransferase-like protein complement(1947129..1950488) Chlorobium chlorochromatii CaD3 3747972 YP_379781.1 CDS Cag_1482 NC_007514.1 1950687 1952585 R ATPase complement(1950687..1952585) Chlorobium chlorochromatii CaD3 3747973 YP_379782.1 CDS Cag_1483 NC_007514.1 1952625 1953548 R acyltransferase complement(1952625..1953548) Chlorobium chlorochromatii CaD3 3747974 YP_379783.1 CDS Cag_1484 NC_007514.1 1953672 1956263 R ATPase complement(1953672..1956263) Chlorobium chlorochromatii CaD3 3747975 YP_379784.1 CDS Cag_1485 NC_007514.1 1956525 1956995 D hypothetical protein 1956525..1956995 Chlorobium chlorochromatii CaD3 3747976 YP_379785.1 CDS Cag_1486 NC_007514.1 1957117 1958538 R toluene transport protein complement(1957117..1958538) Chlorobium chlorochromatii CaD3 3747981 YP_379786.1 CDS Cag_1487 NC_007514.1 1958779 1959090 R XRE family transcriptional regulator complement(1958779..1959090) Chlorobium chlorochromatii CaD3 3747982 YP_379787.1 CDS Cag_1488 NC_007514.1 1959092 1959373 R hypothetical protein complement(1959092..1959373) Chlorobium chlorochromatii CaD3 3747983 YP_379788.1 CDS Cag_1489 NC_007514.1 1959630 1960337 D hypothetical protein 1959630..1960337 Chlorobium chlorochromatii CaD3 3746950 YP_379789.2 CDS Cag_1490 NC_007514.1 1960399 1962021 R catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase complement(1960399..1962021) Chlorobium chlorochromatii CaD3 3746951 YP_379790.1 CDS Cag_1491 NC_007514.1 1962389 1962793 R TPR repeat-containing protein complement(1962389..1962793) Chlorobium chlorochromatii CaD3 3746953 YP_379791.1 CDS Cag_1492 NC_007514.1 1963025 1963900 R (Fe-S)-binding protein complement(1963025..1963900) Chlorobium chlorochromatii CaD3 3746954 YP_379792.1 CDS Cag_1493 NC_007514.1 1963955 1964386 R hypothetical protein complement(1963955..1964386) Chlorobium chlorochromatii CaD3 3746955 YP_379793.1 CDS Cag_1494 NC_007514.1 1964776 1965006 D hypothetical protein 1964776..1965006 Chlorobium chlorochromatii CaD3 3746956 YP_379794.1 CDS Cag_1495 NC_007514.1 1965023 1965367 D hypothetical protein 1965023..1965367 Chlorobium chlorochromatii CaD3 3746957 YP_379795.1 CDS Cag_1496 NC_007514.1 1965405 1965893 R nuclear protein SET complement(1965405..1965893) Chlorobium chlorochromatii CaD3 3746958 YP_379796.1 CDS Cag_1497 NC_007514.1 1966060 1967016 D chlorobiumquinone synthase BchC related protein 1966060..1967016 Chlorobium chlorochromatii CaD3 3746959 YP_379797.1 CDS Cag_1498 NC_007514.1 1967051 1968592 D ATPase 1967051..1968592 Chlorobium chlorochromatii CaD3 3746960 YP_379798.1 CDS Cag_1499 NC_007514.1 1968617 1969654 D hypothetical protein 1968617..1969654 Chlorobium chlorochromatii CaD3 3746961 YP_379799.1 CDS Cag_1500 NC_007514.1 1969797 1970054 D hypothetical protein 1969797..1970054 Chlorobium chlorochromatii CaD3 3746962 YP_379800.1 CDS Cag_1501 NC_007514.1 1970106 1970330 D hypothetical protein 1970106..1970330 Chlorobium chlorochromatii CaD3 3746963 YP_379801.1 CDS Cag_1502 NC_007514.1 1970612 1971112 D hypothetical protein 1970612..1971112 Chlorobium chlorochromatii CaD3 3746964 YP_379802.1 CDS Cag_1503 NC_007514.1 1971117 1971380 D hypothetical protein 1971117..1971380 Chlorobium chlorochromatii CaD3 3746965 YP_379803.1 CDS Cag_1504 NC_007514.1 1971392 1975333 D TPR repeat-containing protein 1971392..1975333 Chlorobium chlorochromatii CaD3 3746966 YP_379804.1 CDS Cag_1505 NC_007514.1 1975407 1975625 D hypothetical protein 1975407..1975625 Chlorobium chlorochromatii CaD3 3746967 YP_379805.1 CDS Cag_1506 NC_007514.1 1975615 1975953 D hypothetical protein 1975615..1975953 Chlorobium chlorochromatii CaD3 3747140 YP_379806.1 CDS Cag_1507 NC_007514.1 1976160 1977395 D transposase 1976160..1977395 Chlorobium chlorochromatii CaD3 3747141 YP_379807.1 CDS Cag_1508 NC_007514.1 1977515 1977709 D hypothetical protein 1977515..1977709 Chlorobium chlorochromatii CaD3 3747142 YP_379808.1 CDS Cag_1509 NC_007514.1 1977873 1978835 R hypothetical protein complement(1977873..1978835) Chlorobium chlorochromatii CaD3 3747143 YP_379809.1 CDS Cag_1511 NC_007514.1 1980291 1980572 D hypothetical protein 1980291..1980572 Chlorobium chlorochromatii CaD3 3747144 YP_379810.1 CDS Cag_1512 NC_007514.1 1980792 1986791 R filamentous hemagglutinin complement(1980792..1986791) Chlorobium chlorochromatii CaD3 3747145 YP_379811.1 CDS radC NC_007514.1 1987113 1987781 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1987113..1987781 Chlorobium chlorochromatii CaD3 3747146 YP_379812.1 CDS Cag_1514 NC_007514.1 1987848 1988591 R uroporphyrinogen-III synthase complement(1987848..1988591) Chlorobium chlorochromatii CaD3 3747147 YP_379813.1 CDS hemC NC_007514.1 1988591 1989532 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(1988591..1989532) Chlorobium chlorochromatii CaD3 3747148 YP_379814.1 CDS hemA NC_007514.1 1989559 1990839 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(1989559..1990839) Chlorobium chlorochromatii CaD3 3747149 YP_379815.1 CDS Cag_1517 NC_007514.1 1991123 1991956 R HemX protein complement(1991123..1991956) Chlorobium chlorochromatii CaD3 3747150 YP_379816.1 CDS Cag_1518 NC_007514.1 1992193 1994019 D GTP-binding protein TypA 1992193..1994019 Chlorobium chlorochromatii CaD3 3747152 YP_379817.1 CDS Cag_1519 NC_007514.1 1994220 1995419 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1994220..1995419) Chlorobium chlorochromatii CaD3 3747153 YP_379818.1 CDS Cag_1520 NC_007514.1 1995864 1996850 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1995864..1996850) Chlorobium chlorochromatii CaD3 3747154 YP_379819.1 CDS Cag_1521 NC_007514.1 1996949 1998490 R methylmalonyl-CoA decarboxylase subunit alpha complement(1996949..1998490) Chlorobium chlorochromatii CaD3 3747155 YP_379820.1 CDS Cag_1522 NC_007514.1 1998757 1999542 D histidinol-phosphate phosphatase 1998757..1999542 Chlorobium chlorochromatii CaD3 3747156 YP_379821.1 CDS Cag_1523 NC_007514.1 1999556 2002366 D DEAD/DEAH box helicase-like protein 1999556..2002366 Chlorobium chlorochromatii CaD3 3747157 YP_379822.1 CDS dinD NC_007514.1 2002387 2003250 D DNA-damage-inducible protein D 2002387..2003250 Chlorobium chlorochromatii CaD3 3747158 YP_379823.1 CDS Cag_1525 NC_007514.1 2003262 2005001 D type I restriction modification enzyme methylase subunit 2003262..2005001 Chlorobium chlorochromatii CaD3 3746584 YP_379824.1 CDS Cag_1526 NC_007514.1 2004998 2006158 D restriction endonuclease S subunits-like protein 2004998..2006158 Chlorobium chlorochromatii CaD3 3746585 YP_379825.1 CDS Cag_1527 NC_007514.1 2006216 2006815 D hypothetical protein 2006216..2006815 Chlorobium chlorochromatii CaD3 3746586 YP_379826.1 CDS Cag_1528 NC_007514.1 2006935 2007093 D restriction modification system, type I 2006935..2007093 Chlorobium chlorochromatii CaD3 3746587 YP_379827.1 CDS Cag_1529 NC_007514.1 2007135 2007713 D hypothetical protein 2007135..2007713 Chlorobium chlorochromatii CaD3 3746588 YP_379828.1 CDS Cag_1530 NC_007514.1 2007833 2007985 D hypothetical protein 2007833..2007985 Chlorobium chlorochromatii CaD3 3746589 YP_379829.1 CDS secG NC_007514.1 2008109 2008462 R preprotein translocase subunit SecG complement(2008109..2008462) Chlorobium chlorochromatii CaD3 3746590 YP_379830.1 CDS Cag_1532 NC_007514.1 2008577 2008795 D hypothetical protein 2008577..2008795 Chlorobium chlorochromatii CaD3 3746591 YP_379831.1 CDS hisB NC_007514.1 2008820 2009410 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 2008820..2009410 Chlorobium chlorochromatii CaD3 3746592 YP_379832.1 CDS Cag_1534 NC_007514.1 2009481 2010182 D hypothetical protein 2009481..2010182 Chlorobium chlorochromatii CaD3 3746593 YP_379833.1 CDS Cag_1535 NC_007514.1 2010314 2010547 R hypothetical protein complement(2010314..2010547) Chlorobium chlorochromatii CaD3 3746594 YP_379834.1 CDS Cag_1536 NC_007514.1 2011144 2011512 R hypothetical protein complement(2011144..2011512) Chlorobium chlorochromatii CaD3 3746595 YP_379835.1 CDS Cag_1537 NC_007514.1 2012462 2013850 D Elongator protein 3/MiaB/NifB 2012462..2013850 Chlorobium chlorochromatii CaD3 3746596 YP_379836.1 CDS Cag_1538 NC_007514.1 2013889 2014905 D catalyzes the synthesis of bacteriochlorophyll c which is the primary pigment in the chlorosomes of the photosynthetic green bacteria; bacteriochlorophyll c synthase 2013889..2014905 Chlorobium chlorochromatii CaD3 3746597 YP_379837.1 CDS Cag_1539 NC_007514.1 2015173 2018994 D PAS/PAC sensor signal transduction histidine kinase 2015173..2018994 Chlorobium chlorochromatii CaD3 3746598 YP_379838.1 CDS Cag_1540 NC_007514.1 2019068 2019850 D two component transcriptional regulator 2019068..2019850 Chlorobium chlorochromatii CaD3 3746599 YP_379839.1 CDS Cag_1541 NC_007514.1 2020049 2021623 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(2020049..2021623) Chlorobium chlorochromatii CaD3 3746600 YP_379840.1 CDS Cag_1542 NC_007514.1 2022062 2022325 R hypothetical protein complement(2022062..2022325) Chlorobium chlorochromatii CaD3 3746601 YP_379841.1 CDS Cag_1543 NC_007514.1 2022343 2022648 R hypothetical protein complement(2022343..2022648) Chlorobium chlorochromatii CaD3 3746602 YP_379842.1 CDS pheT NC_007514.1 2022665 2025076 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(2022665..2025076) Chlorobium chlorochromatii CaD3 3746544 YP_379843.1 CDS Cag_1545 NC_007514.1 2025635 2026090 R NUDIX/MutT family protein complement(2025635..2026090) Chlorobium chlorochromatii CaD3 3746545 YP_379844.1 CDS Cag_1546 NC_007514.1 2026285 2027334 D glucose-1-phosphate thymidylyltransferase 2026285..2027334 Chlorobium chlorochromatii CaD3 3746546 YP_379845.1 CDS Cag_1547 NC_007514.1 2027891 2029105 D methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2027891..2029105 Chlorobium chlorochromatii CaD3 3746547 YP_379846.1 CDS Cag_1548 NC_007514.1 2029207 2030622 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 2029207..2030622 Chlorobium chlorochromatii CaD3 3746548 YP_379847.1 CDS Cag_1549 NC_007514.1 2030874 2031527 D N-(5'-phosphoribosyl)anthranilate isomerase 2030874..2031527 Chlorobium chlorochromatii CaD3 3746549 YP_379848.1 CDS Cag_1550 NC_007514.1 2031558 2033306 R glutathione-regulated potassium-efflux system protein KefC complement(2031558..2033306) Chlorobium chlorochromatii CaD3 3746550 YP_379849.1 CDS Cag_1551 NC_007514.1 2033723 2033995 D RNA recognition motif-containing protein 2033723..2033995 Chlorobium chlorochromatii CaD3 3746551 YP_379850.1 CDS Cag_1552 NC_007514.1 2034112 2034399 D hypothetical protein 2034112..2034399 Chlorobium chlorochromatii CaD3 3746552 YP_379851.1 CDS Cag_1553 NC_007514.1 2034607 2036268 D sulfate anion transporter 2034607..2036268 Chlorobium chlorochromatii CaD3 3746553 YP_379852.1 CDS Cag_1554 NC_007514.1 2036526 2036780 R hypothetical protein complement(2036526..2036780) Chlorobium chlorochromatii CaD3 3746554 YP_379853.1 CDS Cag_1555 NC_007514.1 2036929 2037342 D nitrogenase-associated protein 2036929..2037342 Chlorobium chlorochromatii CaD3 3746555 YP_379854.1 CDS Cag_1556 NC_007514.1 2037443 2037754 D hypothetical protein 2037443..2037754 Chlorobium chlorochromatii CaD3 3746556 YP_379855.1 CDS Cag_1557 NC_007514.1 2037899 2038345 D hypothetical protein 2037899..2038345 Chlorobium chlorochromatii CaD3 3746557 YP_379856.1 CDS Cag_1558 NC_007514.1 2038659 2039609 D hypothetical protein 2038659..2039609 Chlorobium chlorochromatii CaD3 3746558 YP_379857.1 CDS Cag_1559 NC_007514.1 2039958 2041013 R transposase for IS1663 complement(2039958..2041013) Chlorobium chlorochromatii CaD3 3746559 YP_379858.1 CDS Cag_1560 NC_007514.1 2041236 2046752 D hypothetical protein 2041236..2046752 Chlorobium chlorochromatii CaD3 3746560 YP_379859.1 CDS Cag_1561 NC_007514.1 2046926 2047660 R zinc protease complement(2046926..2047660) Chlorobium chlorochromatii CaD3 3746561 YP_379860.1 CDS Cag_1562 NC_007514.1 2047657 2048772 R hypothetical protein complement(2047657..2048772) Chlorobium chlorochromatii CaD3 3746562 YP_379861.1 CDS secA NC_007514.1 2048940 2050928 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 2048940..2050928 Chlorobium chlorochromatii CaD3 3746563 YP_379862.1 CDS Cag_1564 NC_007514.1 2051285 2051905 D hypothetical protein 2051285..2051905 Chlorobium chlorochromatii CaD3 3747121 YP_379863.1 CDS Cag_1565 NC_007514.1 2051896 2052870 D Sua5/YciO/YrdC/YwlC 2051896..2052870 Chlorobium chlorochromatii CaD3 3747122 YP_379864.1 CDS Cag_1566 NC_007514.1 2052927 2054006 D hydrogenase/sulfur reductase subunit beta 2052927..2054006 Chlorobium chlorochromatii CaD3 3747123 YP_379865.1 CDS Cag_1567 NC_007514.1 2054060 2054884 D hydrogenase/sulfur reductase subunit gamma 2054060..2054884 Chlorobium chlorochromatii CaD3 3747124 YP_379866.1 CDS Cag_1568 NC_007514.1 2054950 2055228 R hypothetical protein complement(2054950..2055228) Chlorobium chlorochromatii CaD3 3747125 YP_379867.1 CDS Cag_1569 NC_007514.1 2055502 2055750 R hypothetical protein complement(2055502..2055750) Chlorobium chlorochromatii CaD3 3747126 YP_379868.1 CDS Cag_1570 NC_007514.1 2055929 2056207 R virulence-associated protein D complement(2055929..2056207) Chlorobium chlorochromatii CaD3 3747127 YP_379869.1 CDS Cag_1571 NC_007514.1 2056207 2056446 R hypothetical protein complement(2056207..2056446) Chlorobium chlorochromatii CaD3 3747128 YP_379870.1 CDS Cag_1572 NC_007514.1 2056563 2057378 R hypothetical protein complement(2056563..2057378) Chlorobium chlorochromatii CaD3 3747129 YP_379871.1 CDS Cag_1573 NC_007514.1 2057540 2057764 R hypothetical protein complement(2057540..2057764) Chlorobium chlorochromatii CaD3 3747130 YP_379872.1 CDS Cag_1574 NC_007514.1 2058012 2058743 R hypothetical protein complement(2058012..2058743) Chlorobium chlorochromatii CaD3 3747131 YP_379873.1 CDS Cag_1575 NC_007514.1 2058740 2060002 R hypothetical protein complement(2058740..2060002) Chlorobium chlorochromatii CaD3 3747132 YP_379874.1 CDS Cag_1576 NC_007514.1 2060642 2060875 D hypothetical protein 2060642..2060875 Chlorobium chlorochromatii CaD3 3747133 YP_379875.1 CDS Cag_1577 NC_007514.1 2060872 2061150 D hypothetical protein 2060872..2061150 Chlorobium chlorochromatii CaD3 3747134 YP_379876.1 CDS Cag_1578 NC_007514.1 2061177 2061464 D hypothetical protein 2061177..2061464 Chlorobium chlorochromatii CaD3 3747135 YP_379877.1 CDS Cag_1579 NC_007514.1 2061477 2061704 D hypothetical protein 2061477..2061704 Chlorobium chlorochromatii CaD3 3747136 YP_379878.1 CDS Cag_1580 NC_007514.1 2061805 2063040 D transposase 2061805..2063040 Chlorobium chlorochromatii CaD3 3747137 YP_379879.1 CDS Cag_1581 NC_007514.1 2063194 2064297 R magnesium/cobalt transporter CorA complement(2063194..2064297) Chlorobium chlorochromatii CaD3 3747138 YP_379880.1 CDS Cag_1582 NC_007514.1 2064475 2065653 R heterodisulfide reductase complement(2064475..2065653) Chlorobium chlorochromatii CaD3 3747139 YP_379881.1 CDS Cag_1583 NC_007514.1 2065744 2067996 R heterodisulfide reductase, subunit A/hydrogenase subunit delta complement(2065744..2067996) Chlorobium chlorochromatii CaD3 3746658 YP_379882.1 CDS Cag_1584 NC_007514.1 2068000 2069238 R heterodisulfide reductase, subunit A complement(2068000..2069238) Chlorobium chlorochromatii CaD3 3746659 YP_379883.1 CDS Cag_1585 NC_007514.1 2069397 2071370 R catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite; adenylylsulfate reductase subunit alpha complement(2069397..2071370) Chlorobium chlorochromatii CaD3 3746660 YP_379884.1 CDS Cag_1586 NC_007514.1 2071398 2071820 R adenylylsulfate reductase subunit beta complement(2071398..2071820) Chlorobium chlorochromatii CaD3 3746661 YP_379885.1 CDS sat NC_007514.1 2071946 2073160 R ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; sulfate adenylyltransferase complement(2071946..2073160) Chlorobium chlorochromatii CaD3 3746662 YP_379886.1 CDS Cag_1588 NC_007514.1 2073700 2075844 R glutamine synthetase complement(2073700..2075844) Chlorobium chlorochromatii CaD3 3746663 YP_379887.1 CDS Cag_1589 NC_007514.1 2075936 2076460 R AsnC family transcriptional regulator complement(2075936..2076460) Chlorobium chlorochromatii CaD3 3746664 YP_379888.1 CDS Cag_1590 NC_007514.1 2076972 2078339 D zeta-carotene desaturase 2076972..2078339 Chlorobium chlorochromatii CaD3 3746665 YP_379889.1 CDS Cag_1591 NC_007514.1 2078351 2079385 D hypothetical protein 2078351..2079385 Chlorobium chlorochromatii CaD3 3746666 YP_379890.1 CDS Cag_1592 NC_007514.1 2079373 2080068 D hypothetical protein 2079373..2080068 Chlorobium chlorochromatii CaD3 3746667 YP_379891.1 CDS Cag_1593 NC_007514.1 2080065 2080757 D glycosyl transferase 2080065..2080757 Chlorobium chlorochromatii CaD3 3746668 YP_379892.1 CDS Cag_1594 NC_007514.1 2081012 2082037 D hypothetical protein 2081012..2082037 Chlorobium chlorochromatii CaD3 3746669 YP_379893.1 CDS Cag_1595 NC_007514.1 2082155 2082604 R dUTP pyrophosphatase subfamily protein complement(2082155..2082604) Chlorobium chlorochromatii CaD3 3746670 YP_379894.1 CDS Cag_1596 NC_007514.1 2082764 2083507 D hypothetical protein 2082764..2083507 Chlorobium chlorochromatii CaD3 3746671 YP_379895.1 CDS Cag_1597 NC_007514.1 2083645 2087514 D hypothetical protein 2083645..2087514 Chlorobium chlorochromatii CaD3 3746672 YP_379896.1 CDS Cag_1598 NC_007514.1 2087595 2089529 R hypothetical protein complement(2087595..2089529) Chlorobium chlorochromatii CaD3 3746673 YP_379897.1 CDS Cag_1599 NC_007514.1 2089859 2090593 R hypothetical protein complement(2089859..2090593) Chlorobium chlorochromatii CaD3 3746674 YP_379898.1 CDS Cag_1600 NC_007514.1 2090597 2091880 R ATPase complement(2090597..2091880) Chlorobium chlorochromatii CaD3 3746675 YP_379899.1 CDS Cag_1601 NC_007514.1 2092552 2093118 R hypothetical protein complement(2092552..2093118) Chlorobium chlorochromatii CaD3 3746676 YP_379900.1 CDS Cag_1602 NC_007514.1 2093155 2093631 R bacterioferritin comigratory protein, thiol peroxidase complement(2093155..2093631) Chlorobium chlorochromatii CaD3 3746677 YP_379901.1 CDS Cag_1603 NC_007514.1 2093814 2094308 D NUDIX/MutT family protein 2093814..2094308 Chlorobium chlorochromatii CaD3 3746468 YP_379902.1 CDS Cag_1604 NC_007514.1 2094445 2095620 D hypothetical protein 2094445..2095620 Chlorobium chlorochromatii CaD3 3746469 YP_379903.1 CDS Cag_1605 NC_007514.1 2095811 2096644 R hypothetical protein complement(2095811..2096644) Chlorobium chlorochromatii CaD3 3746470 YP_379904.1 CDS Cag_1606 NC_007514.1 2096888 2098261 D hypothetical protein 2096888..2098261 Chlorobium chlorochromatii CaD3 3746471 YP_379905.1 CDS Cag_1607 NC_007514.1 2098294 2100057 R phosphoenolpyruvate-protein phosphotransferase complement(2098294..2100057) Chlorobium chlorochromatii CaD3 3746473 YP_379906.1 CDS Cag_1608 NC_007514.1 2100167 2101702 R DnaB helicase complement(2100167..2101702) Chlorobium chlorochromatii CaD3 3746474 YP_379907.1 CDS Cag_1609 NC_007514.1 2102122 2103687 R hypothetical protein complement(2102122..2103687) Chlorobium chlorochromatii CaD3 3746475 YP_379908.1 CDS Cag_1610 NC_007514.1 2103687 2104634 R hypothetical protein complement(2103687..2104634) Chlorobium chlorochromatii CaD3 3746476 YP_379909.1 CDS Cag_1611 NC_007514.1 2104884 2107784 R DNA repair ATPase complement(2104884..2107784) Chlorobium chlorochromatii CaD3 3746477 YP_379910.1 CDS Cag_1614 NC_007514.1 2109011 2110249 R DNA/pantothenate metabolism flavoprotein complement(2109011..2110249) Chlorobium chlorochromatii CaD3 3746478 YP_379911.1 CDS Cag_1615 NC_007514.1 2110253 2114875 R hypothetical protein complement(2110253..2114875) Chlorobium chlorochromatii CaD3 3746479 YP_379912.1 CDS Cag_1616 NC_007514.1 2114886 2115377 R bifunctional ADP-heptose synthase complement(2114886..2115377) Chlorobium chlorochromatii CaD3 3746480 YP_379913.1 CDS Cag_1617 NC_007514.1 2115506 2116627 R contains a calcineurin-like phosphoesterase domain; hypothetical protein complement(2115506..2116627) Chlorobium chlorochromatii CaD3 3746481 YP_379914.1 CDS Cag_1618 NC_007514.1 2116979 2117359 D hypothetical protein 2116979..2117359 Chlorobium chlorochromatii CaD3 3746482 YP_379915.1 CDS Cag_1619 NC_007514.1 2117352 2117654 D hypothetical protein 2117352..2117654 Chlorobium chlorochromatii CaD3 3746483 YP_379916.1 CDS Cag_1620 NC_007514.1 2117852 2119717 R magnesium chelatase ATPase subunit D complement(2117852..2119717) Chlorobium chlorochromatii CaD3 3746484 YP_379917.1 CDS Cag_1621 NC_007514.1 2119717 2120865 R magnesium chelatase ATPase subunit I complement(2119717..2120865) Chlorobium chlorochromatii CaD3 3746485 YP_379918.1 CDS Cag_1622 NC_007514.1 2121088 2122179 D pseudouridine synthase 2121088..2122179 Chlorobium chlorochromatii CaD3 3747930 YP_379919.1 CDS Cag_1623 NC_007514.1 2122285 2122869 D hypothetical protein 2122285..2122869 Chlorobium chlorochromatii CaD3 3747931 YP_379920.1 CDS Cag_1624 NC_007514.1 2123121 2123975 R hypothetical protein complement(2123121..2123975) Chlorobium chlorochromatii CaD3 3747932 YP_379921.1 CDS Cag_1625 NC_007514.1 2124104 2124622 R helix-hairpin-helix DNA-binding, class 1 complement(2124104..2124622) Chlorobium chlorochromatii CaD3 3747933 YP_379922.1 CDS Cag_1626 NC_007514.1 2124939 2125265 D hypothetical protein 2124939..2125265 Chlorobium chlorochromatii CaD3 3747934 YP_379923.1 CDS Cag_1627 NC_007514.1 2125269 2126057 D 3-oxoadipate enol-lactonase 2125269..2126057 Chlorobium chlorochromatii CaD3 3747935 YP_379924.1 CDS Cag_1628 NC_007514.1 2126357 2127436 D C-5 cytosine-specific DNA methylase 2126357..2127436 Chlorobium chlorochromatii CaD3 3747936 YP_379925.1 CDS Cag_1629 NC_007514.1 2127417 2128514 D hypothetical protein 2127417..2128514 Chlorobium chlorochromatii CaD3 3747937 YP_379926.1 CDS Cag_1630 NC_007514.1 2128507 2129196 D hypothetical protein 2128507..2129196 Chlorobium chlorochromatii CaD3 3747938 YP_379927.1 CDS Cag_1631 NC_007514.1 2129790 2131097 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(2129790..2131097) Chlorobium chlorochromatii CaD3 3747939 YP_379928.1 CDS rpsU NC_007514.1 2131184 2131381 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(2131184..2131381) Chlorobium chlorochromatii CaD3 3747940 YP_379929.1 CDS Cag_1633 NC_007514.1 2131487 2132041 R hypothetical protein complement(2131487..2132041) Chlorobium chlorochromatii CaD3 3747941 YP_379930.1 CDS Cag_1634 NC_007514.1 2132227 2133600 R hypothetical protein complement(2132227..2133600) Chlorobium chlorochromatii CaD3 3747942 YP_379931.1 CDS Cag_1635 NC_007514.1 2133965 2135065 D alanine racemase 2133965..2135065 Chlorobium chlorochromatii CaD3 3747943 YP_379932.1 CDS Cag_1637 NC_007514.1 2136143 2136571 R hypothetical protein complement(2136143..2136571) Chlorobium chlorochromatii CaD3 3747944 YP_379933.1 CDS Cag_1638 NC_007514.1 2136644 2137141 R hypothetical protein complement(2136644..2137141) Chlorobium chlorochromatii CaD3 3747945 YP_379934.1 CDS Cag_1639 NC_007514.1 2137154 2137978 R short chain dehydrogenase/reductase oxidoreductase complement(2137154..2137978) Chlorobium chlorochromatii CaD3 3747946 YP_379935.1 CDS Cag_1640 NC_007514.1 2137992 2139290 R RuBisCo-like protein complement(2137992..2139290) Chlorobium chlorochromatii CaD3 3747947 YP_379936.1 CDS Cag_1641 NC_007514.1 2139446 2140327 R aldolase complement(2139446..2140327) Chlorobium chlorochromatii CaD3 3747948 YP_379937.1 CDS Cag_1642 NC_007514.1 2140412 2142529 R short chain dehydrogenase complement(2140412..2142529) Chlorobium chlorochromatii CaD3 3747949 YP_379938.1 CDS Cag_1643 NC_007514.1 2142648 2142866 R hypothetical protein complement(2142648..2142866) Chlorobium chlorochromatii CaD3 3747661 YP_379939.1 CDS Cag_1644 NC_007514.1 2142873 2143346 R 2-vinyl bacteriochlorophyllide hydratase complement(2142873..2143346) Chlorobium chlorochromatii CaD3 3747662 YP_379940.1 CDS recX NC_007514.1 2143507 2144004 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 2143507..2144004 Chlorobium chlorochromatii CaD3 3747663 YP_379941.1 CDS pyrH NC_007514.1 2144063 2144782 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2144063..2144782) Chlorobium chlorochromatii CaD3 3747664 YP_379942.1 CDS tsf NC_007514.1 2144916 2145782 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2144916..2145782) Chlorobium chlorochromatii CaD3 3747665 YP_379943.2 CDS rpsB NC_007514.1 2145896 2146651 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2145896..2146651) Chlorobium chlorochromatii CaD3 3747666 YP_379944.1 CDS rpsI NC_007514.1 2146798 2147187 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(2146798..2147187) Chlorobium chlorochromatii CaD3 3747667 YP_379945.1 CDS rplM NC_007514.1 2147212 2147667 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(2147212..2147667) Chlorobium chlorochromatii CaD3 3747668 YP_379946.1 CDS engA NC_007514.1 2147999 2149330 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2147999..2149330 Chlorobium chlorochromatii CaD3 3747669 YP_379947.1 CDS Cag_1652 NC_007514.1 2149495 2150412 D ATP-binding Mrp/Nbp35 family protein 2149495..2150412 Chlorobium chlorochromatii CaD3 3747670 YP_379948.1 CDS Cag_1653 NC_007514.1 2150535 2150789 D NifU protein 2150535..2150789 Chlorobium chlorochromatii CaD3 3747671 YP_379949.1 CDS Cag_1654 NC_007514.1 2150796 2152397 R ATPase complement(2150796..2152397) Chlorobium chlorochromatii CaD3 3747672 YP_379950.1 CDS Cag_1655 NC_007514.1 2152523 2153206 R DNA translocase FtsK complement(2152523..2153206) Chlorobium chlorochromatii CaD3 3747673 YP_379951.1 CDS gcvT NC_007514.1 2153251 2154351 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(2153251..2154351) Chlorobium chlorochromatii CaD3 3747674 YP_379952.1 CDS Cag_1657 NC_007514.1 2154547 2156325 R beta-N-acetylglucosaminidase complement(2154547..2156325) Chlorobium chlorochromatii CaD3 3747675 YP_379953.1 CDS Cag_1658 NC_007514.1 2156441 2157886 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(2156441..2157886) Chlorobium chlorochromatii CaD3 3747676 YP_379954.1 CDS Cag_1659 NC_007514.1 2158016 2158762 R ribonuclease III complement(2158016..2158762) Chlorobium chlorochromatii CaD3 3747677 YP_379955.1 CDS Cag_1660 NC_007514.1 2158919 2160172 R 3-oxoacyl-ACP synthase complement(2158919..2160172) Chlorobium chlorochromatii CaD3 3747678 YP_379956.1 CDS acpP NC_007514.1 2160303 2160542 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2160303..2160542) Chlorobium chlorochromatii CaD3 3747679 YP_379957.1 CDS Cag_1662 NC_007514.1 2160845 2161582 R 3-oxoacyl-ACP reductase complement(2160845..2161582) Chlorobium chlorochromatii CaD3 3747256 YP_379958.1 CDS Cag_1663 NC_007514.1 2161622 2162533 R malonyl CoA-ACP transacylase complement(2161622..2162533) Chlorobium chlorochromatii CaD3 3747257 YP_379959.1 CDS Cag_1664 NC_007514.1 2162543 2163532 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(2162543..2163532) Chlorobium chlorochromatii CaD3 3747258 YP_379960.1 CDS Cag_1665 NC_007514.1 2163744 2164769 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(2163744..2164769) Chlorobium chlorochromatii CaD3 3747259 YP_379961.1 CDS rpmF NC_007514.1 2164809 2164997 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2164809..2164997) Chlorobium chlorochromatii CaD3 3747260 YP_379962.1 CDS Cag_1667 NC_007514.1 2165030 2165650 R hypothetical protein complement(2165030..2165650) Chlorobium chlorochromatii CaD3 3747261 YP_379963.1 CDS Cag_1668 NC_007514.1 2165968 2167404 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(2165968..2167404) Chlorobium chlorochromatii CaD3 3747262 YP_379964.1 CDS Cag_1669 NC_007514.1 2167431 2168330 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(2167431..2168330) Chlorobium chlorochromatii CaD3 3747263 YP_379965.1 CDS Cag_1670 NC_007514.1 2168358 2169488 R glycosyl transferase complement(2168358..2169488) Chlorobium chlorochromatii CaD3 3747264 YP_379966.1 CDS Cag_1671 NC_007514.1 2169702 2171219 R hypothetical protein complement(2169702..2171219) Chlorobium chlorochromatii CaD3 3747265 YP_379967.1 CDS Cag_1672 NC_007514.1 2171327 2172796 R O-succinylbenzoate-CoA ligase complement(2171327..2172796) Chlorobium chlorochromatii CaD3 3747266 YP_379968.1 CDS Cag_1673 NC_007514.1 2173170 2174849 D 2-isopropylmalate synthase 2173170..2174849 Chlorobium chlorochromatii CaD3 3747267 YP_379969.1 CDS Cag_1674 NC_007514.1 2175180 2176115 D adhesion protein 2175180..2176115 Chlorobium chlorochromatii CaD3 3747268 YP_379970.1 CDS Cag_1675 NC_007514.1 2176112 2176813 D ATPase 2176112..2176813 Chlorobium chlorochromatii CaD3 3747269 YP_379971.1 CDS Cag_1676 NC_007514.1 2176869 2177696 D ABC transporter 2176869..2177696 Chlorobium chlorochromatii CaD3 3747270 YP_379972.1 CDS Cag_1677 NC_007514.1 2177866 2178051 R Ric1 protein complement(2177866..2178051) Chlorobium chlorochromatii CaD3 3747271 YP_379973.1 CDS Cag_1678 NC_007514.1 2178427 2179224 D hypothetical protein 2178427..2179224 Chlorobium chlorochromatii CaD3 3747272 YP_379974.1 CDS Cag_1679 NC_007514.1 2179263 2180627 R hypothetical protein complement(2179263..2180627) Chlorobium chlorochromatii CaD3 3747273 YP_379975.1 CDS Cag_1680 NC_007514.1 2180632 2181501 R Delta 1-pyrroline-5-carboxylate reductase complement(2180632..2181501) Chlorobium chlorochromatii CaD3 3747274 YP_379976.1 CDS Cag_1681 NC_007514.1 2181561 2182358 R cytochrome c biogenesis protein complement(2181561..2182358) Chlorobium chlorochromatii CaD3 3747275 YP_379977.1 CDS Cag_1682 NC_007514.1 2182365 2183633 R hypothetical protein complement(2182365..2183633) Chlorobium chlorochromatii CaD3 3746372 YP_379978.1 CDS Cag_1683 NC_007514.1 2183772 2185646 D thiol:disulfide interchange protein DsbD 2183772..2185646 Chlorobium chlorochromatii CaD3 3746373 YP_379979.1 CDS Cag_1684 NC_007514.1 2185737 2186189 R rare lipoprotein A complement(2185737..2186189) Chlorobium chlorochromatii CaD3 3746374 YP_379980.1 CDS Cag_1685 NC_007514.1 2186616 2188616 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(2186616..2188616) Chlorobium chlorochromatii CaD3 3746375 YP_379981.1 CDS Cag_1686 NC_007514.1 2188881 2189258 R hypothetical protein complement(2188881..2189258) Chlorobium chlorochromatii CaD3 3746376 YP_379982.1 CDS Cag_1687 NC_007514.1 2189255 2190394 R hypothetical protein complement(2189255..2190394) Chlorobium chlorochromatii CaD3 3746377 YP_379983.1 CDS leuS NC_007514.1 2190422 2192839 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(2190422..2192839) Chlorobium chlorochromatii CaD3 3746378 YP_379984.1 CDS Cag_1689 NC_007514.1 2192915 2195101 R polynucleotide phosphorylase complement(2192915..2195101) Chlorobium chlorochromatii CaD3 3746379 YP_379985.1 CDS Cag_1690 NC_007514.1 2195160 2195405 R hypothetical protein complement(2195160..2195405) Chlorobium chlorochromatii CaD3 3746380 YP_379986.1 CDS Cag_1691 NC_007514.1 2195426 2196109 D serine esterase 2195426..2196109 Chlorobium chlorochromatii CaD3 3746381 YP_379987.1 CDS metH NC_007514.1 2196259 2199933 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 2196259..2199933 Chlorobium chlorochromatii CaD3 3746382 YP_379988.1 CDS Cag_1694 NC_007514.1 2200530 2200991 D hypothetical protein 2200530..2200991 Chlorobium chlorochromatii CaD3 3746383 YP_379989.1 CDS Cag_1695 NC_007514.1 2200966 2202000 D reverse transcriptase 2200966..2202000 Chlorobium chlorochromatii CaD3 3746384 YP_379990.1 CDS Cag_1696 NC_007514.1 2202353 2204608 D hypothetical protein 2202353..2204608 Chlorobium chlorochromatii CaD3 3746385 YP_379991.1 CDS Cag_1697 NC_007514.1 2204905 2205150 R hypothetical protein complement(2204905..2205150) Chlorobium chlorochromatii CaD3 3746386 YP_379992.1 CDS Cag_1698 NC_007514.1 2205726 2206361 R peptidoglycan-associated (lipo)protein-like protein complement(2205726..2206361) Chlorobium chlorochromatii CaD3 3746387 YP_379993.1 CDS Cag_1699 NC_007514.1 2206529 2208310 R hypothetical protein complement(2206529..2208310) Chlorobium chlorochromatii CaD3 3746388 YP_379994.1 CDS Cag_1700 NC_007514.1 2208303 2210054 R menaquinone biosynthesis protein complement(2208303..2210054) Chlorobium chlorochromatii CaD3 3746389 YP_379995.1 CDS Cag_1701 NC_007514.1 2210051 2211499 R isochorismate synthase complement(2210051..2211499) Chlorobium chlorochromatii CaD3 3746390 YP_379996.1 CDS Cag_1702 NC_007514.1 2211573 2212253 R TPR repeat-containing protein complement(2211573..2212253) Chlorobium chlorochromatii CaD3 3746968 YP_379997.1 CDS Cag_1703 NC_007514.1 2212379 2214838 R hypothetical protein complement(2212379..2214838) Chlorobium chlorochromatii CaD3 3746969 YP_379998.1 CDS Cag_1704 NC_007514.1 2214894 2216699 R peptidase S49, protease IV complement(2214894..2216699) Chlorobium chlorochromatii CaD3 3746970 YP_379999.1 CDS Cag_1705 NC_007514.1 2216692 2217672 R oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein complement(2216692..2217672) Chlorobium chlorochromatii CaD3 3746971 YP_380000.1 CDS Cag_1706 NC_007514.1 2218198 2218932 D hypothetical protein 2218198..2218932 Chlorobium chlorochromatii CaD3 3746972 YP_380001.1 CDS panC NC_007514.1 2218919 2219791 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2218919..2219791 Chlorobium chlorochromatii CaD3 3746973 YP_380002.1 CDS Cag_1708 NC_007514.1 2219857 2220975 D hypothetical protein 2219857..2220975 Chlorobium chlorochromatii CaD3 3746974 YP_380003.1 CDS Cag_1709 NC_007514.1 2221546 2222820 R hypothetical protein complement(2221546..2222820) Chlorobium chlorochromatii CaD3 3746975 YP_380004.1 CDS Cag_1710 NC_007514.1 2223435 2224622 R NADH-dependent butanol dehydrogenase complement(2223435..2224622) Chlorobium chlorochromatii CaD3 3746976 YP_380005.1 CDS pheS NC_007514.1 2224770 2225804 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2224770..2225804) Chlorobium chlorochromatii CaD3 3746977 YP_380006.1 CDS rplT NC_007514.1 2225816 2226163 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(2225816..2226163) Chlorobium chlorochromatii CaD3 3746978 YP_380007.1 CDS rpmI NC_007514.1 2226194 2226388 R 50S ribosomal protein L35 complement(2226194..2226388) Chlorobium chlorochromatii CaD3 3746979 YP_380008.1 CDS infC NC_007514.1 2226496 2227176 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(2226496..2227176) Chlorobium chlorochromatii CaD3 3746980 YP_380009.1 CDS thrS NC_007514.1 2227260 2229233 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2227260..2229233) Chlorobium chlorochromatii CaD3 3746981 YP_380010.1 CDS Cag_1716 NC_007514.1 2229642 2231048 R chlorophyllide reductase subunit Z complement(2229642..2231048) Chlorobium chlorochromatii CaD3 3746982 YP_380011.1 CDS Cag_1717 NC_007514.1 2231122 2232060 R hypothetical protein complement(2231122..2232060) Chlorobium chlorochromatii CaD3 3746983 YP_380012.1 CDS Cag_1718 NC_007514.1 2232123 2233214 R O-succinylbenzoate-CoA synthase complement(2232123..2233214) Chlorobium chlorochromatii CaD3 3746984 YP_380013.1 CDS Cag_1719 NC_007514.1 2233214 2234035 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(2233214..2234035) Chlorobium chlorochromatii CaD3 3746985 YP_380014.1 CDS Cag_1720 NC_007514.1 2234049 2234846 R thioesterase complement(2234049..2234846) Chlorobium chlorochromatii CaD3 3746986 YP_380015.1 CDS Cag_1721 NC_007514.1 2234849 2236366 R hypothetical protein complement(2234849..2236366) Chlorobium chlorochromatii CaD3 3746987 YP_380016.1 CDS Cag_1722 NC_007514.1 2236557 2239598 R hypothetical protein complement(2236557..2239598) Chlorobium chlorochromatii CaD3 3746505 YP_380017.1 CDS Cag_1723 NC_007514.1 2239638 2240528 R hypothetical protein complement(2239638..2240528) Chlorobium chlorochromatii CaD3 3746506 YP_380018.1 CDS Cag_1724 NC_007514.1 2240643 2240894 R hypothetical protein complement(2240643..2240894) Chlorobium chlorochromatii CaD3 3746507 YP_380019.1 CDS Cag_1725 NC_007514.1 2241262 2243124 D Kup system potassium uptake protein 2241262..2243124 Chlorobium chlorochromatii CaD3 3746508 YP_380020.1 CDS Cag_1726 NC_007514.1 2243131 2243898 D hypothetical protein 2243131..2243898 Chlorobium chlorochromatii CaD3 3746509 YP_380021.1 CDS Cag_1727 NC_007514.1 2244057 2244356 D hypothetical protein 2244057..2244356 Chlorobium chlorochromatii CaD3 3746510 YP_380022.1 CDS Cag_1728 NC_007514.1 2244347 2245516 R pentapeptide repeat-containing protein complement(2244347..2245516) Chlorobium chlorochromatii CaD3 3746511 YP_380023.1 CDS Cag_1729 NC_007514.1 2245586 2246284 D hypothetical protein 2245586..2246284 Chlorobium chlorochromatii CaD3 3746512 YP_380024.1 CDS Cag_1730 NC_007514.1 2246346 2249915 R pyruvate:ferredoxin (flavodoxin) oxidoreductase complement(2246346..2249915) Chlorobium chlorochromatii CaD3 3746513 YP_380025.1 CDS Cag_1731 NC_007514.1 2250436 2251182 D RNA methyltransferase TrmH 2250436..2251182 Chlorobium chlorochromatii CaD3 3746514 YP_380026.1 CDS Cag_1732 NC_007514.1 2251324 2251701 D glycine cleavage H-protein 2251324..2251701 Chlorobium chlorochromatii CaD3 3746515 YP_380027.1 CDS Cag_1733 NC_007514.1 2251705 2253042 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 2251705..2253042 Chlorobium chlorochromatii CaD3 3746516 YP_380028.1 CDS dapA NC_007514.1 2253168 2254058 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(2253168..2254058) Chlorobium chlorochromatii CaD3 3746517 YP_380029.1 CDS Cag_1735 NC_007514.1 2254245 2255042 R SpoU rRNA methylase complement(2254245..2255042) Chlorobium chlorochromatii CaD3 3746518 YP_380030.1 CDS Cag_1736 NC_007514.1 2255039 2255812 R hypothetical protein complement(2255039..2255812) Chlorobium chlorochromatii CaD3 3746519 YP_380031.1 CDS Cag_1737 NC_007514.1 2256164 2257660 D hypothetical protein 2256164..2257660 Chlorobium chlorochromatii CaD3 3746520 YP_380032.1 CDS Cag_1738 NC_007514.1 2258334 2258573 R hypothetical protein complement(2258334..2258573) Chlorobium chlorochromatii CaD3 3746521 YP_380033.1 CDS Cag_1739 NC_007514.1 2258647 2259024 R hypothetical protein complement(2258647..2259024) Chlorobium chlorochromatii CaD3 3746522 YP_380034.1 CDS Cag_1740 NC_007514.1 2259095 2260195 R aminopeptidase complement(2259095..2260195) Chlorobium chlorochromatii CaD3 3746523 YP_380035.1 CDS trpD NC_007514.1 2260325 2261380 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2260325..2261380 Chlorobium chlorochromatii CaD3 3746874 YP_380036.1 CDS Cag_1742 NC_007514.1 2261630 2262460 D bacteriochlorophyll/chlorophyll a synthase 2261630..2262460 Chlorobium chlorochromatii CaD3 3746875 YP_380037.1 CDS rpmB NC_007514.1 2262568 2262786 D required for 70S ribosome assembly; 50S ribosomal protein L28 2262568..2262786 Chlorobium chlorochromatii CaD3 3746876 YP_380038.1 CDS rnhA NC_007514.1 2262878 2263318 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2262878..2263318 Chlorobium chlorochromatii CaD3 3746877 YP_380039.1 CDS Cag_1745 NC_007514.1 2263366 2264364 D hypothetical protein 2263366..2264364 Chlorobium chlorochromatii CaD3 3746878 YP_380040.1 CDS Cag_1746 NC_007514.1 2264365 2265429 R MesJ protein complement(2264365..2265429) Chlorobium chlorochromatii CaD3 3746879 YP_380041.1 CDS Cag_1747 NC_007514.1 2265522 2266160 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 2265522..2266160 Chlorobium chlorochromatii CaD3 3746880 YP_380042.1 CDS Cag_1748 NC_007514.1 2266354 2266563 D twin-arginine translocation protein TatA 2266354..2266563 Chlorobium chlorochromatii CaD3 3746881 YP_380043.1 CDS Cag_1749 NC_007514.1 2266628 2268352 D DNA repair protein RecN 2266628..2268352 Chlorobium chlorochromatii CaD3 3746882 YP_380044.1 CDS Cag_1750 NC_007514.1 2268369 2268983 D hypothetical protein 2268369..2268983 Chlorobium chlorochromatii CaD3 3746883 YP_380045.1 CDS Cag_1751 NC_007514.1 2269191 2269628 D prevent-host-death protein 2269191..2269628 Chlorobium chlorochromatii CaD3 3746884 YP_380046.1 CDS Cag_1752 NC_007514.1 2269625 2269936 D hypothetical protein 2269625..2269936 Chlorobium chlorochromatii CaD3 3746885 YP_380047.1 CDS Cag_1753 NC_007514.1 2270051 2270812 R hypothetical protein complement(2270051..2270812) Chlorobium chlorochromatii CaD3 3746886 YP_380048.1 CDS Cag_1754 NC_007514.1 2270961 2272403 D aldehyde dehydrogenase 2270961..2272403 Chlorobium chlorochromatii CaD3 3746887 YP_380049.1 CDS Cag_1755 NC_007514.1 2272562 2273113 D outer surface protein 2272562..2273113 Chlorobium chlorochromatii CaD3 3746888 YP_380050.1 CDS Cag_1756 NC_007514.1 2273499 2273957 D hypothetical protein 2273499..2273957 Chlorobium chlorochromatii CaD3 3746889 YP_380051.1 CDS Cag_1757 NC_007514.1 2273996 2275552 R Mg chelatase-like protein complement(2273996..2275552) Chlorobium chlorochromatii CaD3 3746890 YP_380052.1 CDS Cag_1758 NC_007514.1 2275984 2276571 D photosystem P840 reaction center cytochrome c-551 2275984..2276571 Chlorobium chlorochromatii CaD3 3746891 YP_380053.1 CDS Cag_1759 NC_007514.1 2276744 2277094 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(2276744..2277094) Chlorobium chlorochromatii CaD3 3746892 YP_380054.1 CDS Cag_1760 NC_007514.1 2277322 2278011 D hypothetical protein 2277322..2278011 Chlorobium chlorochromatii CaD3 3746893 YP_380055.1 CDS Cag_1761 NC_007514.1 2278008 2278895 D hypothetical protein 2278008..2278895 Chlorobium chlorochromatii CaD3 3746621 YP_380056.1 CDS Cag_1762 NC_007514.1 2278902 2279918 D phage/XerD family site-specific recombinase 2278902..2279918 Chlorobium chlorochromatii CaD3 3746622 YP_380057.1 CDS Cag_1763 NC_007514.1 2280006 2280326 D hypothetical protein 2280006..2280326 Chlorobium chlorochromatii CaD3 3746623 YP_380058.1 CDS Cag_1764 NC_007514.1 2280441 2281442 D catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 2280441..2281442 Chlorobium chlorochromatii CaD3 3746624 YP_380059.1 CDS Cag_1765 NC_007514.1 2281429 2283219 D peptide ABC transporter substrate-binding protein 2281429..2283219 Chlorobium chlorochromatii CaD3 3746625 YP_380060.1 CDS Cag_1766 NC_007514.1 2283235 2284200 D peptide ABC transporter permease 2283235..2284200 Chlorobium chlorochromatii CaD3 3746626 YP_380061.1 CDS ruvB NC_007514.1 2284284 2285342 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2284284..2285342 Chlorobium chlorochromatii CaD3 3746627 YP_380062.1 CDS Cag_1768 NC_007514.1 2285395 2286873 D TPR repeat-containing protein 2285395..2286873 Chlorobium chlorochromatii CaD3 3746628 YP_380063.1 CDS Cag_1769 NC_007514.1 2286893 2287318 R hypothetical protein complement(2286893..2287318) Chlorobium chlorochromatii CaD3 3746630 YP_380064.1 CDS Cag_1770 NC_007514.1 2287305 2287526 R hypothetical protein complement(2287305..2287526) Chlorobium chlorochromatii CaD3 3746631 YP_380065.1 CDS Cag_1771 NC_007514.1 2287575 2288330 R hypothetical protein complement(2287575..2288330) Chlorobium chlorochromatii CaD3 3746632 YP_380066.1 CDS Cag_1772 NC_007514.1 2288369 2290090 R hypothetical protein complement(2288369..2290090) Chlorobium chlorochromatii CaD3 3746633 YP_380067.1 CDS Cag_1773 NC_007514.1 2290172 2290942 R hypothetical protein complement(2290172..2290942) Chlorobium chlorochromatii CaD3 3746634 YP_380068.1 CDS Cag_1774 NC_007514.1 2290942 2291547 R LemA family protein complement(2290942..2291547) Chlorobium chlorochromatii CaD3 3746635 YP_380069.1 CDS Cag_1775 NC_007514.1 2291651 2293858 R metal dependent phosphohydrolase complement(2291651..2293858) Chlorobium chlorochromatii CaD3 3746636 YP_380070.1 CDS Cag_1776 NC_007514.1 2294482 2294682 D hypothetical protein 2294482..2294682 Chlorobium chlorochromatii CaD3 3746637 YP_380071.1 CDS Cag_1777 NC_007514.1 2294862 2295293 R twitching motility protein PilT complement(2294862..2295293) Chlorobium chlorochromatii CaD3 3746638 YP_380072.1 CDS Cag_1778 NC_007514.1 2295628 2296803 R DNA polymerase III subunit delta complement(2295628..2296803) Chlorobium chlorochromatii CaD3 3747198 YP_380073.1 CDS Cag_1779 NC_007514.1 2296926 2297837 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(2296926..2297837) Chlorobium chlorochromatii CaD3 3747199 YP_380074.1 CDS Cag_1780 NC_007514.1 2297911 2299116 R phosphofructokinase complement(2297911..2299116) Chlorobium chlorochromatii CaD3 3747200 YP_380075.1 CDS Cag_1781 NC_007514.1 2299387 2300661 D lipoprotein releasing system 2299387..2300661 Chlorobium chlorochromatii CaD3 3747201 YP_380076.1 CDS ispF NC_007514.1 2300836 2301309 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2300836..2301309) Chlorobium chlorochromatii CaD3 3747202 YP_380077.1 CDS Cag_1783 NC_007514.1 2301364 2302305 R dihydroorotate dehydrogenase 1 complement(2301364..2302305) Chlorobium chlorochromatii CaD3 3747203 YP_380078.1 CDS Cag_1784 NC_007514.1 2302392 2304509 R alpha-glucan phosphorylase complement(2302392..2304509) Chlorobium chlorochromatii CaD3 3747204 YP_380079.1 CDS Cag_1785 NC_007514.1 2304773 2305633 D hypothetical protein 2304773..2305633 Chlorobium chlorochromatii CaD3 3747205 YP_380080.1 CDS Cag_1786 NC_007514.1 2305915 2306379 R hypothetical protein complement(2305915..2306379) Chlorobium chlorochromatii CaD3 3747206 YP_380081.1 CDS Cag_1787 NC_007514.1 2306406 2308271 R carbamoyl-phosphate synthase, large subunit complement(2306406..2308271) Chlorobium chlorochromatii CaD3 3747207 YP_380082.1 CDS Cag_1788 NC_007514.1 2308541 2309782 D 3,4-dihydroxy-2-butanone 4-phosphate synthase 2308541..2309782 Chlorobium chlorochromatii CaD3 3747208 YP_380083.1 CDS glyA NC_007514.1 2309834 2311150 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2309834..2311150 Chlorobium chlorochromatii CaD3 3747209 YP_380084.1 CDS Cag_1790 NC_007514.1 2311272 2312963 R hypothetical protein complement(2311272..2312963) Chlorobium chlorochromatii CaD3 3747210 YP_380085.1 CDS Cag_1791 NC_007514.1 2312964 2313677 R hypothetical protein complement(2312964..2313677) Chlorobium chlorochromatii CaD3 3747211 YP_380086.1 CDS Cag_1792 NC_007514.1 2313821 2314621 R hypothetical protein complement(2313821..2314621) Chlorobium chlorochromatii CaD3 3747212 YP_380087.1 CDS Cag_1793 NC_007514.1 2314664 2315449 D 6-phosphogluconolactonase 2314664..2315449 Chlorobium chlorochromatii CaD3 3747213 YP_380088.1 CDS Cag_1794 NC_007514.1 2315524 2315751 R hypothetical protein complement(2315524..2315751) Chlorobium chlorochromatii CaD3 3747214 YP_380089.1 CDS Cag_1795 NC_007514.1 2315792 2316106 R hypothetical protein complement(2315792..2316106) Chlorobium chlorochromatii CaD3 3747215 YP_380090.1 CDS Cag_1796 NC_007514.1 2316188 2319331 D ankyrin 2316188..2319331 Chlorobium chlorochromatii CaD3 3747216 YP_380091.1 CDS Cag_1797 NC_007514.1 2319411 2319842 R hypothetical protein complement(2319411..2319842) Chlorobium chlorochromatii CaD3 3747217 YP_380092.1 CDS Cag_1798 NC_007514.1 2319848 2320255 R XRE family transcriptional regulator complement(2319848..2320255) Chlorobium chlorochromatii CaD3 3746913 YP_380093.1 CDS Cag_1799 NC_007514.1 2320259 2320741 R hypothetical protein complement(2320259..2320741) Chlorobium chlorochromatii CaD3 3746914 YP_380094.1 CDS Cag_1800 NC_007514.1 2320903 2322540 R electron transfer flavoprotein-ubiquinone oxidoreductase complement(2320903..2322540) Chlorobium chlorochromatii CaD3 3746915 YP_380095.1 CDS Cag_1801 NC_007514.1 2322562 2323944 R divalent cation transporter complement(2322562..2323944) Chlorobium chlorochromatii CaD3 3746916 YP_380096.1 CDS Cag_1802 NC_007514.1 2324131 2324742 R methylpurine-DNA glycosylase (MPG) complement(2324131..2324742) Chlorobium chlorochromatii CaD3 3746917 YP_380097.1 CDS Cag_1803 NC_007514.1 2324899 2325696 D ParaA family ATPase 2324899..2325696 Chlorobium chlorochromatii CaD3 3746918 YP_380098.1 CDS Cag_1804 NC_007514.1 2325721 2326632 D ParB-like partition protein 2325721..2326632 Chlorobium chlorochromatii CaD3 3746919 YP_380099.1 CDS Cag_1805 NC_007514.1 2326763 2327512 D dihydrodipicolinate reductase 2326763..2327512 Chlorobium chlorochromatii CaD3 3746920 YP_380100.1 CDS Cag_1806 NC_007514.1 2327595 2328719 R oxygen-independent coproporphyrinogen III oxidase complement(2327595..2328719) Chlorobium chlorochromatii CaD3 3746921 YP_380101.1 CDS Cag_1807 NC_007514.1 2328750 2329352 R histidinol-phosphate phosphatase complement(2328750..2329352) Chlorobium chlorochromatii CaD3 3746922 YP_380102.1 CDS Cag_1808 NC_007514.1 2329365 2330834 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(2329365..2330834) Chlorobium chlorochromatii CaD3 3746923 YP_380103.1 CDS Cag_1809 NC_007514.1 2330964 2332094 D hypothetical protein 2330964..2332094 Chlorobium chlorochromatii CaD3 3746924 YP_380104.1 CDS Cag_1810 NC_007514.1 2332111 2332683 D bacteriochlorophyll 4-vinyl reductase 2332111..2332683 Chlorobium chlorochromatii CaD3 3746925 YP_380105.1 CDS Cag_1811 NC_007514.1 2332987 2333313 R XRE family transcriptional regulator complement(2332987..2333313) Chlorobium chlorochromatii CaD3 3746926 YP_380106.1 CDS Cag_1812 NC_007514.1 2333303 2333614 R hypothetical protein complement(2333303..2333614) Chlorobium chlorochromatii CaD3 3746927 YP_380107.1 CDS chlL NC_007514.1 2333875 2334705 R light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein complement(2333875..2334705) Chlorobium chlorochromatii CaD3 3746928 YP_380108.1 CDS Cag_1814 NC_007514.1 2334897 2336519 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B complement(2334897..2336519) Chlorobium chlorochromatii CaD3 3746929 YP_380109.1 CDS Cag_1815 NC_007514.1 2336594 2337877 R light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N complement(2336594..2337877) Chlorobium chlorochromatii CaD3 3746930 YP_380110.1 CDS Cag_1816 NC_007514.1 2338086 2339390 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(2338086..2339390) Chlorobium chlorochromatii CaD3 3746931 YP_380111.1 CDS engB NC_007514.1 2339403 2339987 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2339403..2339987) Chlorobium chlorochromatii CaD3 3746448 YP_380112.1 CDS cysS NC_007514.1 2340235 2341677 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2340235..2341677 Chlorobium chlorochromatii CaD3 3746449 YP_380113.1 CDS Cag_1819 NC_007514.1 2341756 2342112 R hypothetical protein complement(2341756..2342112) Chlorobium chlorochromatii CaD3 3746450 YP_380114.1 CDS Cag_1820 NC_007514.1 2342122 2342763 R hypothetical protein complement(2342122..2342763) Chlorobium chlorochromatii CaD3 3746451 YP_380115.1 CDS Cag_1821 NC_007514.1 2342890 2344011 R mannose-1-phosphate guanylyltransferase complement(2342890..2344011) Chlorobium chlorochromatii CaD3 3746452 YP_380116.1 CDS gidB NC_007514.1 2344227 2344931 D glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 2344227..2344931 Chlorobium chlorochromatii CaD3 3746453 YP_380117.1 CDS rplQ NC_007514.1 2344992 2345456 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(2344992..2345456) Chlorobium chlorochromatii CaD3 3746454 YP_380118.1 CDS Cag_1824 NC_007514.1 2345498 2346481 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(2345498..2346481) Chlorobium chlorochromatii CaD3 3746455 YP_380119.1 CDS rpsD NC_007514.1 2346512 2347123 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(2346512..2347123) Chlorobium chlorochromatii CaD3 3746456 YP_380120.1 CDS Cag_1826 NC_007514.1 2347158 2347541 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(2347158..2347541) Chlorobium chlorochromatii CaD3 3746457 YP_380121.1 CDS rpsM NC_007514.1 2347586 2347963 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(2347586..2347963) Chlorobium chlorochromatii CaD3 3746458 YP_380122.1 CDS rpmJ NC_007514.1 2347997 2348113 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(2347997..2348113) Chlorobium chlorochromatii CaD3 3746459 YP_380123.1 CDS infA NC_007514.1 2348223 2348441 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2348223..2348441) Chlorobium chlorochromatii CaD3 3746460 YP_380124.1 CDS Cag_1830 NC_007514.1 2348495 2349277 R peptidase M24A complement(2348495..2349277) Chlorobium chlorochromatii CaD3 3746461 YP_380125.1 CDS secY NC_007514.1 2349286 2350617 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(2349286..2350617) Chlorobium chlorochromatii CaD3 3746462 YP_380126.1 CDS rplO NC_007514.1 2350647 2351201 R late assembly protein; 50S ribosomal protein L15 complement(2350647..2351201) Chlorobium chlorochromatii CaD3 3746463 YP_380127.1 CDS rpmD NC_007514.1 2351236 2351427 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(2351236..2351427) Chlorobium chlorochromatii CaD3 3746464 YP_380128.1 CDS rpsE NC_007514.1 2351443 2351961 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(2351443..2351961) Chlorobium chlorochromatii CaD3 3746465 YP_380129.1 CDS rplR NC_007514.1 2351986 2352345 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(2351986..2352345) Chlorobium chlorochromatii CaD3 3746466 YP_380130.1 CDS rplF NC_007514.1 2352399 2352938 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(2352399..2352938) Chlorobium chlorochromatii CaD3 3746467 YP_380131.1 CDS rpsH NC_007514.1 2352967 2353362 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(2352967..2353362) Chlorobium chlorochromatii CaD3 3747218 YP_380132.1 CDS rpsN NC_007514.1 2353423 2353692 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(2353423..2353692) Chlorobium chlorochromatii CaD3 3747219 YP_380133.1 CDS rplE NC_007514.1 2353709 2354296 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(2353709..2354296) Chlorobium chlorochromatii CaD3 3747220 YP_380134.2 CDS rplX NC_007514.1 2354358 2354600 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(2354358..2354600) Chlorobium chlorochromatii CaD3 3747221 YP_380135.1 CDS rplN NC_007514.1 2354719 2355087 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(2354719..2355087) Chlorobium chlorochromatii CaD3 3747222 YP_380136.1 CDS rpsQ NC_007514.1 2355127 2355396 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(2355127..2355396) Chlorobium chlorochromatii CaD3 3747223 YP_380137.1 CDS Cag_1843 NC_007514.1 2355455 2355652 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(2355455..2355652) Chlorobium chlorochromatii CaD3 3747224 YP_380138.1 CDS rplP NC_007514.1 2355683 2356102 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(2355683..2356102) Chlorobium chlorochromatii CaD3 3747225 YP_380139.1 CDS rpsC NC_007514.1 2356148 2356909 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(2356148..2356909) Chlorobium chlorochromatii CaD3 3747226 YP_380140.1 CDS rplV NC_007514.1 2356923 2357282 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(2356923..2357282) Chlorobium chlorochromatii CaD3 3747227 YP_380141.1 CDS rpsS NC_007514.1 2357313 2357609 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(2357313..2357609) Chlorobium chlorochromatii CaD3 3747228 YP_380142.1 CDS rplB NC_007514.1 2357643 2358482 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(2357643..2358482) Chlorobium chlorochromatii CaD3 3747229 YP_380143.1 CDS rplW NC_007514.1 2358513 2358824 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(2358513..2358824) Chlorobium chlorochromatii CaD3 3747230 YP_380144.1 CDS rplD NC_007514.1 2358855 2359481 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(2358855..2359481) Chlorobium chlorochromatii CaD3 3747231 YP_380145.1 CDS rplC NC_007514.1 2359502 2360131 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(2359502..2360131) Chlorobium chlorochromatii CaD3 3747232 YP_380146.1 CDS rpsJ NC_007514.1 2360158 2360469 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(2360158..2360469) Chlorobium chlorochromatii CaD3 3747233 YP_380147.1 CDS Cag_1853 NC_007514.1 2360547 2361728 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(2360547..2361728) Chlorobium chlorochromatii CaD3 3747234 YP_380148.1 CDS Cag_1854 NC_007514.1 2361788 2363902 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(2361788..2363902) Chlorobium chlorochromatii CaD3 3747235 YP_380149.1 CDS Cag_1855 NC_007514.1 2363940 2364407 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(2363940..2364407) Chlorobium chlorochromatii CaD3 3747236 YP_380150.1 CDS rpsL NC_007514.1 2364439 2364852 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(2364439..2364852) Chlorobium chlorochromatii CaD3 3747009 YP_380151.1 CDS Cag_1857 NC_007514.1 2365057 2367453 R hypothetical protein complement(2365057..2367453) Chlorobium chlorochromatii CaD3 3747010 YP_380152.1 CDS Cag_1858 NC_007514.1 2367653 2367955 R XRE family transcriptional regulator complement(2367653..2367955) Chlorobium chlorochromatii CaD3 3747011 YP_380153.1 CDS Cag_1860 NC_007514.1 2368507 2369754 D hypothetical protein 2368507..2369754 Chlorobium chlorochromatii CaD3 3747012 YP_380154.1 CDS Cag_1861 NC_007514.1 2370018 2370260 D hypothetical protein 2370018..2370260 Chlorobium chlorochromatii CaD3 3747013 YP_380155.1 CDS Cag_1862 NC_007514.1 2370424 2371914 R polysaccharide efflux transporter complement(2370424..2371914) Chlorobium chlorochromatii CaD3 3747014 YP_380156.1 CDS Cag_1863 NC_007514.1 2371911 2373047 R glycosyl transferase, group 1 family protein complement(2371911..2373047) Chlorobium chlorochromatii CaD3 3747015 YP_380157.1 CDS Cag_1864 NC_007514.1 2373200 2374228 R hypothetical protein complement(2373200..2374228) Chlorobium chlorochromatii CaD3 3747016 YP_380158.1 CDS Cag_1865 NC_007514.1 2374247 2374846 R hypothetical protein complement(2374247..2374846) Chlorobium chlorochromatii CaD3 3747017 YP_380159.1 CDS Cag_1866 NC_007514.1 2374880 2375887 R DNA-binding protein complement(2374880..2375887) Chlorobium chlorochromatii CaD3 3747018 YP_380160.1 CDS Cag_1867 NC_007514.1 2375927 2376778 R glycosyl transferase complement(2375927..2376778) Chlorobium chlorochromatii CaD3 3747019 YP_380161.1 CDS Cag_1868 NC_007514.1 2376775 2377902 R glycosyl transferase complement(2376775..2377902) Chlorobium chlorochromatii CaD3 3747020 YP_380162.1 CDS Cag_1869 NC_007514.1 2377905 2378171 R HPrNtr complement(2377905..2378171) Chlorobium chlorochromatii CaD3 3747021 YP_380163.1 CDS Cag_1870 NC_007514.1 2378361 2378858 R catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase complement(2378361..2378858) Chlorobium chlorochromatii CaD3 3747022 YP_380164.1 CDS obgE NC_007514.1 2378864 2379880 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(2378864..2379880) Chlorobium chlorochromatii CaD3 3747023 YP_380165.1 CDS Cag_1872 NC_007514.1 2379971 2380219 D exodeoxyribonuclease, small subunit 2379971..2380219 Chlorobium chlorochromatii CaD3 3747024 YP_380166.1 CDS gatB NC_007514.1 2380313 2381740 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(2380313..2381740) Chlorobium chlorochromatii CaD3 3747025 YP_380167.1 CDS Cag_1874 NC_007514.1 2381866 2382432 R hypothetical protein complement(2381866..2382432) Chlorobium chlorochromatii CaD3 3747026 YP_380168.1 CDS Cag_1875 NC_007514.1 2382485 2384926 R TPR repeat-containing protein complement(2382485..2384926) Chlorobium chlorochromatii CaD3 3747027 YP_380169.1 CDS Cag_1876 NC_007514.1 2384981 2386330 R ATPase complement(2384981..2386330) Chlorobium chlorochromatii CaD3 3747028 YP_380170.1 CDS Cag_1877 NC_007514.1 2386382 2386687 R hypothetical protein complement(2386382..2386687) Chlorobium chlorochromatii CaD3 3746776 YP_380171.1 CDS Cag_1878 NC_007514.1 2386923 2388056 R alanine dehydrogenase complement(2386923..2388056) Chlorobium chlorochromatii CaD3 3746777 YP_380172.1 CDS Cag_1879 NC_007514.1 2388232 2388720 R chlorosome envelope protein X complement(2388232..2388720) Chlorobium chlorochromatii CaD3 3746778 YP_380173.1 CDS Cag_1880 NC_007514.1 2389015 2390238 D hypothetical protein 2389015..2390238 Chlorobium chlorochromatii CaD3 3746779 YP_380174.1 CDS Cag_1881 NC_007514.1 2390238 2390645 D hypothetical protein 2390238..2390645 Chlorobium chlorochromatii CaD3 3746780 YP_380175.1 CDS Cag_1882 NC_007514.1 2390726 2394025 R transcription-repair coupling factor complement(2390726..2394025) Chlorobium chlorochromatii CaD3 3746781 YP_380176.1 CDS Cag_1883 NC_007514.1 2394177 2395148 D oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein 2394177..2395148 Chlorobium chlorochromatii CaD3 3746782 YP_380177.1 CDS Cag_1884 NC_007514.1 2395222 2395875 D hypothetical protein 2395222..2395875 Chlorobium chlorochromatii CaD3 3746783 YP_380178.1 CDS Cag_1885 NC_007514.1 2395872 2397317 D transcriptional regulator 2395872..2397317 Chlorobium chlorochromatii CaD3 3746784 YP_380179.1 CDS Cag_1886 NC_007514.1 2397314 2398303 D von Willebrand factor A 2397314..2398303 Chlorobium chlorochromatii CaD3 3746785 YP_380180.1 CDS Cag_1887 NC_007514.1 2398353 2399357 D von Willebrand factor A 2398353..2399357 Chlorobium chlorochromatii CaD3 3746786 YP_380181.1 CDS Cag_1888 NC_007514.1 2399583 2401100 R carotenoid isomerase complement(2399583..2401100) Chlorobium chlorochromatii CaD3 3746787 YP_380182.1 CDS Cag_1889 NC_007514.1 2401366 2402067 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 2401366..2402067 Chlorobium chlorochromatii CaD3 3746788 YP_380183.1 CDS Cag_1890 NC_007514.1 2402102 2402338 D hypothetical protein 2402102..2402338 Chlorobium chlorochromatii CaD3 3746789 YP_380184.1 CDS Cag_1891 NC_007514.1 2402646 2403035 D ArsR family transcriptional regulator 2402646..2403035 Chlorobium chlorochromatii CaD3 3746790 YP_380185.1 CDS Cag_1892 NC_007514.1 2403273 2403671 D heat shock protein 20 2403273..2403671 Chlorobium chlorochromatii CaD3 3746791 YP_380186.1 CDS dnaK NC_007514.1 2403753 2405666 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2403753..2405666 Chlorobium chlorochromatii CaD3 3746792 YP_380187.1 CDS Cag_1894 NC_007514.1 2405816 2406250 D photosystem P840 reaction center protein PscD 2405816..2406250 Chlorobium chlorochromatii CaD3 3746793 YP_380188.1 CDS Cag_1895 NC_007514.1 2406533 2409610 D hypothetical protein 2406533..2409610 Chlorobium chlorochromatii CaD3 3746794 YP_380189.1 CDS Cag_1896 NC_007514.1 2409689 2411413 D hypothetical protein 2409689..2411413 Chlorobium chlorochromatii CaD3 3747641 YP_380190.1 CDS Cag_1897 NC_007514.1 2411709 2416382 D Nidogen, extracellular region 2411709..2416382 Chlorobium chlorochromatii CaD3 3747642 YP_380191.1 CDS Cag_1898 NC_007514.1 2416439 2418037 R catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; alpha-isopropylmalate synthase complement(2416439..2418037) Chlorobium chlorochromatii CaD3 3747643 YP_380192.1 CDS Cag_1899 NC_007514.1 2418042 2418608 R 3-isopropylmalate dehydratase small subunit complement(2418042..2418608) Chlorobium chlorochromatii CaD3 3747644 YP_380193.1 CDS Cag_1900 NC_007514.1 2418637 2419932 R 3-isopropylmalate dehydratase complement(2418637..2419932) Chlorobium chlorochromatii CaD3 3747645 YP_380194.1 CDS Cag_1901 NC_007514.1 2420036 2421094 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(2420036..2421094) Chlorobium chlorochromatii CaD3 3747646 YP_380195.1 CDS Cag_1902 NC_007514.1 2421110 2422102 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2421110..2422102) Chlorobium chlorochromatii CaD3 3747647 YP_380196.1 CDS ilvH NC_007514.1 2422189 2422668 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(2422189..2422668) Chlorobium chlorochromatii CaD3 3747648 YP_380197.1 CDS Cag_1904 NC_007514.1 2422886 2423095 R hypothetical protein complement(2422886..2423095) Chlorobium chlorochromatii CaD3 3747649 YP_380198.1 CDS Cag_1905 NC_007514.1 2423177 2424898 R acetolactate synthase large subunit biosynthetic type complement(2423177..2424898) Chlorobium chlorochromatii CaD3 3747650 YP_380199.1 CDS Cag_1906 NC_007514.1 2425075 2426754 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(2425075..2426754) Chlorobium chlorochromatii CaD3 3747651 YP_380200.1 CDS Cag_1907 NC_007514.1 2427525 2428187 D ExbB/TolQ family protein 2427525..2428187 Chlorobium chlorochromatii CaD3 3747652 YP_380201.1 CDS Cag_1908 NC_007514.1 2428200 2428625 D ExbD/TolR family protein 2428200..2428625 Chlorobium chlorochromatii CaD3 3747653 YP_380202.1 CDS Cag_1909 NC_007514.1 2428627 2429571 D hypothetical protein 2428627..2429571 Chlorobium chlorochromatii CaD3 3747654 YP_380203.1 CDS Cag_1910 NC_007514.1 2429599 2430921 D TolB protein 2429599..2430921 Chlorobium chlorochromatii CaD3 3747655 YP_380204.1 CDS Cag_1911 NC_007514.1 2430964 2431581 D OmpA domain-containing protein 2430964..2431581 Chlorobium chlorochromatii CaD3 3747656 YP_380205.1 CDS Cag_1912 NC_007514.1 2431671 2432534 D TPR repeat-containing protein 2431671..2432534 Chlorobium chlorochromatii CaD3 3747657 YP_380206.1 CDS Cag_1913 NC_007514.1 2432740 2432979 R hypothetical protein complement(2432740..2432979) Chlorobium chlorochromatii CaD3 3747658 YP_380207.1 CDS Cag_1916 NC_007514.1 2434242 2435000 R hypothetical protein complement(2434242..2435000) Chlorobium chlorochromatii CaD3 3747659 YP_380208.1 CDS Cag_1917 NC_007514.1 2435056 2435325 D hypothetical protein 2435056..2435325 Chlorobium chlorochromatii CaD3 3747660 YP_380209.1 CDS Cag_1918 NC_007514.1 2435513 2436748 R transposase complement(2435513..2436748) Chlorobium chlorochromatii CaD3 3747293 YP_380210.1 CDS Cag_1919 NC_007514.1 2436941 2441521 R hypothetical protein complement(2436941..2441521) Chlorobium chlorochromatii CaD3 3747294 YP_380211.1 CDS Cag_1920 NC_007514.1 2441589 2453093 R hypothetical protein complement(2441589..2453093) Chlorobium chlorochromatii CaD3 3747295 YP_380212.1 CDS Cag_1921 NC_007514.1 2453687 2455000 D twin-arginine translocation pathway signal 2453687..2455000 Chlorobium chlorochromatii CaD3 3747296 YP_380213.1 CDS Cag_1922 NC_007514.1 2455297 2455644 D sulfur oxidation protein SoxX 2455297..2455644 Chlorobium chlorochromatii CaD3 3747297 YP_380214.1 CDS Cag_1923 NC_007514.1 2455707 2456168 D twin-arginine translocation pathway signal 2455707..2456168 Chlorobium chlorochromatii CaD3 3747298 YP_380215.1 CDS Cag_1924 NC_007514.1 2456275 2456580 D sulfur oxidation protein SoxZ 2456275..2456580 Chlorobium chlorochromatii CaD3 3747299 YP_380216.1 CDS Cag_1925 NC_007514.1 2456713 2457570 D sulfur oxidation protein SoxA 2456713..2457570 Chlorobium chlorochromatii CaD3 3747300 YP_380217.1 CDS Cag_1926 NC_007514.1 2457582 2457896 D hypothetical protein 2457582..2457896 Chlorobium chlorochromatii CaD3 3747301 YP_380218.1 CDS Cag_1927 NC_007514.1 2458034 2459791 D twin-arginine translocation pathway signal 2458034..2459791 Chlorobium chlorochromatii CaD3 3747302 YP_380219.1 CDS Cag_1928 NC_007514.1 2459879 2460430 D thioredoxin 2459879..2460430 Chlorobium chlorochromatii CaD3 3747303 YP_380220.1 CDS Cag_1929 NC_007514.1 2460579 2462717 R ferrous iron transport protein B complement(2460579..2462717) Chlorobium chlorochromatii CaD3 3747304 YP_380221.1 CDS Cag_1930 NC_007514.1 2462737 2462961 R ferrous iron transport protein A complement(2462737..2462961) Chlorobium chlorochromatii CaD3 3747305 YP_380222.1 CDS Cag_1931 NC_007514.1 2463146 2463511 R Hit family protein complement(2463146..2463511) Chlorobium chlorochromatii CaD3 3747306 YP_380223.1 CDS Cag_1932 NC_007514.1 2463544 2464914 R hypothetical protein complement(2463544..2464914) Chlorobium chlorochromatii CaD3 3747307 YP_380224.1 CDS Cag_1933 NC_007514.1 2464926 2465672 R catalyzes the reversible formation of fumarate and ubiquinol from succinate and ubiquinone; succinate dehydrogenase/fumarate reductase iron-sulfur subunit complement(2464926..2465672) Chlorobium chlorochromatii CaD3 3747308 YP_380225.1 CDS sdhA NC_007514.1 2465683 2467623 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(2465683..2467623) Chlorobium chlorochromatii CaD3 3747309 YP_380226.1 CDS Cag_1935 NC_007514.1 2467670 2468335 R succinate dehydrogenase, cytochrome b558 subunit complement(2467670..2468335) Chlorobium chlorochromatii CaD3 3747310 YP_380227.1 CDS Cag_1936 NC_007514.1 2468468 2469115 R hypothetical protein complement(2468468..2469115) Chlorobium chlorochromatii CaD3 3747311 YP_380228.1 CDS Cag_1937 NC_007514.1 2469119 2469736 R hypothetical protein complement(2469119..2469736) Chlorobium chlorochromatii CaD3 3746697 YP_380229.1 CDS Cag_1938 NC_007514.1 2469736 2471013 R Sel1 repeat-containing protein complement(2469736..2471013) Chlorobium chlorochromatii CaD3 3746698 YP_380230.1 CDS Cag_1939 NC_007514.1 2471042 2471794 R lysophospholipase L2 complement(2471042..2471794) Chlorobium chlorochromatii CaD3 3746699 YP_380231.1 CDS Cag_1940 NC_007514.1 2472234 2472725 D rare lipoprotein A 2472234..2472725 Chlorobium chlorochromatii CaD3 3746700 YP_380232.1 CDS Cag_1941 NC_007514.1 2472805 2473806 R Elongator protein 3/MiaB/NifB complement(2472805..2473806) Chlorobium chlorochromatii CaD3 3746701 YP_380233.1 CDS Cag_1942 NC_007514.1 2473799 2474794 R uroporphyrin-III C-methyltransferase complement(2473799..2474794) Chlorobium chlorochromatii CaD3 3746702 YP_380234.1 CDS Cag_1943 NC_007514.1 2474811 2475272 R siroheme synthase-like protein complement(2474811..2475272) Chlorobium chlorochromatii CaD3 3746703 YP_380235.1 CDS Cag_1944 NC_007514.1 2475380 2476399 R polysulfide reductase, subunit C complement(2475380..2476399) Chlorobium chlorochromatii CaD3 3746704 YP_380236.1 CDS Cag_1945 NC_007514.1 2476408 2477169 R polysulfide reductase, subunit B complement(2476408..2477169) Chlorobium chlorochromatii CaD3 3746705 YP_380237.1 CDS Cag_1946 NC_007514.1 2477172 2477552 R hypothetical protein complement(2477172..2477552) Chlorobium chlorochromatii CaD3 3746706 YP_380238.1 CDS Cag_1947 NC_007514.1 2477545 2479194 R DsrK protein complement(2477545..2479194) Chlorobium chlorochromatii CaD3 3746707 YP_380239.1 CDS Cag_1948 NC_007514.1 2479197 2480195 R DsrM protein complement(2479197..2480195) Chlorobium chlorochromatii CaD3 3746708 YP_380240.1 CDS Cag_1949 NC_007514.1 2480192 2480602 R hypothetical protein complement(2480192..2480602) Chlorobium chlorochromatii CaD3 3746709 YP_380241.1 CDS Cag_1950 NC_007514.1 2480679 2480972 R DsrH protein complement(2480679..2480972) Chlorobium chlorochromatii CaD3 3746710 YP_380242.1 CDS Cag_1951 NC_007514.1 2481004 2481375 R DsrF protein complement(2481004..2481375) Chlorobium chlorochromatii CaD3 3746711 YP_380243.1 CDS Cag_1952 NC_007514.1 2481383 2481742 R DsrE protein complement(2481383..2481742) Chlorobium chlorochromatii CaD3 3746712 YP_380244.1 CDS Cag_1953 NC_007514.1 2481863 2482225 R hypothetical protein complement(2481863..2482225) Chlorobium chlorochromatii CaD3 3746713 YP_380245.1 CDS Cag_1954 NC_007514.1 2482256 2483995 R unknown function; glutamate synthase (NADPH) small subunit complement(2482256..2483995) Chlorobium chlorochromatii CaD3 3746714 YP_380246.1 CDS Cag_1955 NC_007514.1 2484018 2485109 R sulfite reductase, dissimilatory-type beta subunit complement(2484018..2485109) Chlorobium chlorochromatii CaD3 3746715 YP_380247.1 CDS Cag_1956 NC_007514.1 2485192 2486448 R sulfite reductase, dissimilatory-type alpha subunit complement(2485192..2486448) Chlorobium chlorochromatii CaD3 3746716 YP_380248.1 CDS Cag_1957 NC_007514.1 2486502 2486837 R sulfite reductase, dissimilatory-type subunit gamma complement(2486502..2486837) Chlorobium chlorochromatii CaD3 3747819 YP_380249.1 CDS Cag_1958 NC_007514.1 2487099 2488517 R cobyrinic acid a,c-diamide synthase CbiA complement(2487099..2488517) Chlorobium chlorochromatii CaD3 3747820 YP_380250.1 CDS Cag_1959 NC_007514.1 2488607 2488918 R redox protein regulator of disulfide bond formation-like protein complement(2488607..2488918) Chlorobium chlorochromatii CaD3 3747821 YP_380251.1 CDS Cag_1960 NC_007514.1 2488902 2489369 R rhodanese-like protein complement(2488902..2489369) Chlorobium chlorochromatii CaD3 3747822 YP_380252.1 CDS Cag_1961 NC_007514.1 2489384 2489893 R hypothetical protein complement(2489384..2489893) Chlorobium chlorochromatii CaD3 3747823 YP_380253.1 CDS Cag_1962 NC_007514.1 2489984 2490397 R hypothetical protein complement(2489984..2490397) Chlorobium chlorochromatii CaD3 3747824 YP_380254.1 CDS Cag_1963 NC_007514.1 2490416 2491333 R hypothetical protein complement(2490416..2491333) Chlorobium chlorochromatii CaD3 3747825 YP_380255.1 CDS Cag_1964 NC_007514.1 2491503 2494361 R molybdenum enzyme related to thiosulfate reductase and polysulfide reductase, large subunit complement(2491503..2494361) Chlorobium chlorochromatii CaD3 3747826 YP_380256.1 CDS Cag_1965 NC_007514.1 2494383 2495936 R Fe-S-cluster-containing hydrogenase components 1-like protein complement(2494383..2495936) Chlorobium chlorochromatii CaD3 3747827 YP_380257.1 CDS Cag_1966 NC_007514.1 2496300 2496995 R transmembrane prediction; hypothetical protein complement(2496300..2496995) Chlorobium chlorochromatii CaD3 3747828 YP_380258.1 CDS Cag_1967 NC_007514.1 2497036 2499570 R hypothetical protein complement(2497036..2499570) Chlorobium chlorochromatii CaD3 3747829 YP_380259.1 CDS Cag_1968 NC_007514.1 2500292 2501587 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(2500292..2501587) Chlorobium chlorochromatii CaD3 3747830 YP_380260.1 CDS Cag_1969 NC_007514.1 2501729 2502580 R recombination protein O, RecO complement(2501729..2502580) Chlorobium chlorochromatii CaD3 3747831 YP_380261.1 CDS Cag_1970 NC_007514.1 2502662 2502907 D hypothetical protein 2502662..2502907 Chlorobium chlorochromatii CaD3 3747832 YP_380262.1 CDS Cag_1971 NC_007514.1 2502999 2503910 R hypothetical protein complement(2502999..2503910) Chlorobium chlorochromatii CaD3 3747833 YP_380263.1 CDS Cag_1972 NC_007514.1 2503979 2505103 R glycosyl hydrolase complement(2503979..2505103) Chlorobium chlorochromatii CaD3 3747834 YP_380264.1 CDS Cag_1973 NC_007514.1 2505100 2506419 R ATPase complement(2505100..2506419) Chlorobium chlorochromatii CaD3 3747835 YP_380265.1 CDS Cag_1974 NC_007514.1 2506774 2507607 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2506774..2507607 Chlorobium chlorochromatii CaD3 3747352 YP_380266.1 CDS Cag_1975 NC_007514.1 2507580 2508212 D 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 2507580..2508212 Chlorobium chlorochromatii CaD3 3747353 YP_380267.1 CDS Cag_1976 NC_007514.1 2508240 2508590 D hypothetical protein 2508240..2508590 Chlorobium chlorochromatii CaD3 3747354 YP_380268.1 CDS mazG NC_007514.1 2508625 2509428 D functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 2508625..2509428 Chlorobium chlorochromatii CaD3 3747355 YP_380269.1 CDS Cag_1978 NC_007514.1 2509542 2510042 R rubrerythrin complement(2509542..2510042) Chlorobium chlorochromatii CaD3 3747356 YP_380270.1 CDS Cag_1979 NC_007514.1 2510128 2510622 R bacterioferritin complement(2510128..2510622) Chlorobium chlorochromatii CaD3 3747357 YP_380271.1 CDS Cag_1980 NC_007514.1 2510734 2511399 R alkyl hydroperoxidase; catalyze the reduction of hydrogen peroxide to water and the reduction of alkyl hydroperoxides to the corresponding alcohols; peroxiredoxin complement(2510734..2511399) Chlorobium chlorochromatii CaD3 3747358 YP_380272.1 CDS Cag_1981 NC_007514.1 2513293 2514528 R transposase complement(2513293..2514528) Chlorobium chlorochromatii CaD3 3747359 YP_380273.1 CDS Cag_1982 NC_007514.1 2514742 2515239 R ferric uptake regulator family protein complement(2514742..2515239) Chlorobium chlorochromatii CaD3 3747361 YP_380274.1 CDS Cag_1983 NC_007514.1 2515296 2518592 R alpha amylase complement(2515296..2518592) Chlorobium chlorochromatii CaD3 3747362 YP_380275.1 CDS Cag_1984 NC_007514.1 2519000 2521015 R alpha amylase complement(2519000..2521015) Chlorobium chlorochromatii CaD3 3747363 YP_380276.1 CDS Cag_1985 NC_007514.1 2521259 2522191 R cold shock protein complement(2521259..2522191) Chlorobium chlorochromatii CaD3 3747364 YP_380277.1 CDS Cag_1986 NC_007514.1 2522309 2522992 R protease complement(2522309..2522992) Chlorobium chlorochromatii CaD3 3747365 YP_380278.1 CDS Cag_1987 NC_007514.1 2522992 2523429 R hypothetical protein complement(2522992..2523429) Chlorobium chlorochromatii CaD3 3747366 YP_380279.1 CDS Cag_1988 NC_007514.1 2523442 2524794 R hypothetical protein complement(2523442..2524794) Chlorobium chlorochromatii CaD3 3747367 YP_380280.1 CDS Cag_1989 NC_007514.1 2525145 2526851 D ribonuclease E and G 2525145..2526851 Chlorobium chlorochromatii CaD3 3747368 YP_380281.1 CDS dapD NC_007514.1 2526881 2527744 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2526881..2527744 Chlorobium chlorochromatii CaD3 3747369 YP_380282.1 CDS Cag_1991 NC_007514.1 2527749 2529497 D peptidase S41A, C-terminal protease 2527749..2529497 Chlorobium chlorochromatii CaD3 3747370 YP_380283.1 CDS Cag_1992 NC_007514.1 2529619 2530008 R hypothetical protein complement(2529619..2530008) Chlorobium chlorochromatii CaD3 3747102 YP_380284.1 CDS rnhB NC_007514.1 2530005 2530625 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2530005..2530625) Chlorobium chlorochromatii CaD3 3747103 YP_380285.1 CDS Cag_1994 NC_007514.1 2530731 2530949 D hypothetical protein 2530731..2530949 Chlorobium chlorochromatii CaD3 3747104 YP_380286.1 CDS Cag_1995 NC_007514.1 2530940 2531239 D hypothetical protein 2530940..2531239 Chlorobium chlorochromatii CaD3 3747105 YP_380287.1 CDS Cag_1996 NC_007514.1 2531281 2532027 R segregation and condensation protein A complement(2531281..2532027) Chlorobium chlorochromatii CaD3 3747106 YP_380288.1 CDS Cag_1997 NC_007514.1 2532303 2533049 D TPR repeat-containing protein 2532303..2533049 Chlorobium chlorochromatii CaD3 3747107 YP_380289.1 CDS Cag_1998 NC_007514.1 2533170 2533511 R nitrogen regulatory protein P-II (GlnB, GlnK) complement(2533170..2533511) Chlorobium chlorochromatii CaD3 3747108 YP_380290.1 CDS Cag_1999 NC_007514.1 2533520 2534854 R ammonium transporter complement(2533520..2534854) Chlorobium chlorochromatii CaD3 3747109 YP_380291.1 CDS Cag_2000 NC_007514.1 2535074 2537176 R Fis family transcriptional regulator complement(2535074..2537176) Chlorobium chlorochromatii CaD3 3747110 YP_380292.1 CDS Cag_2001 NC_007514.1 2537276 2538286 R hypothetical protein complement(2537276..2538286) Chlorobium chlorochromatii CaD3 3747111 YP_380293.1 CDS Cag_2002 NC_007514.1 2538602 2539081 D ferric uptake regulator family protein 2538602..2539081 Chlorobium chlorochromatii CaD3 3747112 YP_380294.1 CDS Cag_2003 NC_007514.1 2539273 2540406 D Fic family protein 2539273..2540406 Chlorobium chlorochromatii CaD3 3747113 YP_380295.1 CDS Cag_2004 NC_007514.1 2540686 2541981 R sulfide dehydrogenase, flavoprotein subunit complement(2540686..2541981) Chlorobium chlorochromatii CaD3 3747114 YP_380296.1 CDS Cag_2005 NC_007514.1 2542003 2542386 R sulfide dehydrogenase, cytochrome subunit complement(2542003..2542386) Chlorobium chlorochromatii CaD3 3747115 YP_380297.1 CDS Cag_2006 NC_007514.1 2542881 2544746 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2542881..2544746 Chlorobium chlorochromatii CaD3 3747116 YP_380298.1 CDS Cag_2007 NC_007514.1 2544884 2547250 D DNA-directed DNA polymerase B 2544884..2547250 Chlorobium chlorochromatii CaD3 3747117 YP_380299.1 CDS Cag_2008 NC_007514.1 2547439 2548662 D rubredoxin:oxygen oxidoreductase 2547439..2548662 Chlorobium chlorochromatii CaD3 3747118 YP_380300.1 CDS Cag_2009 NC_007514.1 2548801 2549094 R hypothetical protein complement(2548801..2549094) Chlorobium chlorochromatii CaD3 3747119 YP_380301.1 CDS Cag_2010 NC_007514.1 2549248 2550537 R transporter complement(2549248..2550537) Chlorobium chlorochromatii CaD3 3747120 YP_380302.1 CDS Cag_2011 NC_007514.1 2550760 2550981 D hypothetical protein 2550760..2550981 Chlorobium chlorochromatii CaD3 3747984 YP_380303.1 CDS Cag_2012 NC_007514.1 2551059 2552951 R catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase complement(2551059..2552951) Chlorobium chlorochromatii CaD3 3747985 YP_380304.1 CDS Cag_2013 NC_007514.1 2553185 2553715 R thiol:disulfide interchange protein, thioredoxin family protein complement(2553185..2553715) Chlorobium chlorochromatii CaD3 3747986 YP_380305.1 CDS Cag_2014 NC_007514.1 2554198 2555586 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 2554198..2555586 Chlorobium chlorochromatii CaD3 3747987 YP_380306.1 CDS Cag_2015 NC_007514.1 2555601 2555867 D ATP synthase F1 subunit epsilon 2555601..2555867 Chlorobium chlorochromatii CaD3 3747988 YP_380307.1 CDS Cag_2016 NC_007514.1 2556034 2556990 D muramoyltetrapeptide carboxypeptidase 2556034..2556990 Chlorobium chlorochromatii CaD3 3747989 YP_380308.1 CDS Cag_2017 NC_007514.1 2557003 2557359 D hypothetical protein 2557003..2557359 Chlorobium chlorochromatii CaD3 3747990 YP_380309.1 CDS Cag_2018 NC_007514.1 2557535 2558419 D hypothetical protein 2557535..2558419 Chlorobium chlorochromatii CaD3 3747991 YP_380310.1 CDS Cag_2019 NC_007514.1 2558847 2559785 R exopolyphosphatase complement(2558847..2559785) Chlorobium chlorochromatii CaD3 3747992 YP_380311.1 CDS Cag_2020 NC_007514.1 2559939 2560577 D hypothetical protein 2559939..2560577 Chlorobium chlorochromatii CaD3 3747993 YP_380312.1 CDS prmA NC_007514.1 2560587 2561453 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(2560587..2561453) Chlorobium chlorochromatii CaD3 3747994 YP_380313.1 CDS Cag_2022 NC_007514.1 2561520 2562140 R NLP/P60 family protein complement(2561520..2562140) Chlorobium chlorochromatii CaD3 3747995 YP_380314.1 CDS Cag_2023 NC_007514.1 2562192 2563607 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase 2562192..2563607 Chlorobium chlorochromatii CaD3 3747996 YP_380315.1 CDS Cag_2024 NC_007514.1 2563625 2564620 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2563625..2564620 Chlorobium chlorochromatii CaD3 3747997 YP_380316.1 CDS Cag_2025 NC_007514.1 2564677 2565381 D hypothetical protein 2564677..2565381 Chlorobium chlorochromatii CaD3 3747998 YP_380317.1 CDS gpsA NC_007514.1 2565402 2566403 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2565402..2566403 Chlorobium chlorochromatii CaD3 3747999 YP_380318.1 CDS Cag_2027 NC_007514.1 2566414 2566908 R phosphohistidine phosphatase SixA complement(2566414..2566908) Chlorobium chlorochromatii CaD3 3748000 YP_380319.1 CDS Cag_2028 NC_007514.1 2566954 2568387 R 23S rRNA methyltransferase complement(2566954..2568387) Chlorobium chlorochromatii CaD3 3748001 YP_380320.1 CDS Cag_2029 NC_007514.1 2568439 2569041 R PA-phosphatase-like phosphoesterase complement(2568439..2569041) Chlorobium chlorochromatii CaD3 3748002 YP_380321.1 CDS Cag_2030 NC_007514.1 2569060 2570814 R Oxa1/60 kDa IMP family protein complement(2569060..2570814) Chlorobium chlorochromatii CaD3 3748003 YP_380322.1 CDS Cag_2031 NC_007514.1 2570807 2571091 R hypothetical protein complement(2570807..2571091) Chlorobium chlorochromatii CaD3 3746988 YP_380323.1 CDS rnpA NC_007514.1 2571199 2571456 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(2571199..2571456) Chlorobium chlorochromatii CaD3 3746989 YP_380324.1 CDS rpmH NC_007514.1 2571689 2571844 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(2571689..2571844) Chlorobium chlorochromatii CaD3 3746990 Cag_t01 tRNA Cag_t01 NC_007514.1 10616 10692 R tRNA-Val complement(10616..10692) Chlorobium chlorochromatii CaD3 5469406 Cag_t02 tRNA Cag_t02 NC_007514.1 75584 75656 D tRNA-Ala 75584..75656 Chlorobium chlorochromatii CaD3 5469418 Cag_t03 tRNA Cag_t03 NC_007514.1 104236 104312 D tRNA-Ile 104236..104312 Chlorobium chlorochromatii CaD3 5469415 Cag_t04 tRNA Cag_t04 NC_007514.1 104342 104417 D tRNA-Ala 104342..104417 Chlorobium chlorochromatii CaD3 5469393 Cag_t05 tRNA Cag_t05 NC_007514.1 164847 164922 D tRNA-Arg 164847..164922 Chlorobium chlorochromatii CaD3 5469417 Cag_t06 tRNA Cag_t06 NC_007514.1 206029 206105 R tRNA-Val complement(206029..206105) Chlorobium chlorochromatii CaD3 5469394 Cag_t07 tRNA Cag_t07 NC_007514.1 352954 353031 R tRNA-Asp complement(352954..353031) Chlorobium chlorochromatii CaD3 5469416 Cag_t08 tRNA Cag_t08 NC_007514.1 399282 399354 D tRNA-Thr 399282..399354 Chlorobium chlorochromatii CaD3 5469425 Cag_t09 tRNA Cag_t09 NC_007514.1 399367 399451 D tRNA-Tyr 399367..399451 Chlorobium chlorochromatii CaD3 5469391 Cag_t10 tRNA Cag_t10 NC_007514.1 399460 399532 D tRNA-Thr 399460..399532 Chlorobium chlorochromatii CaD3 5469392 Cag_t11 tRNA Cag_t11 NC_007514.1 399570 399642 D tRNA-Trp 399570..399642 Chlorobium chlorochromatii CaD3 5469409 Cag_t12 tRNA Cag_t12 NC_007514.1 457755 457827 D tRNA-Phe 457755..457827 Chlorobium chlorochromatii CaD3 5469400 Cag_t13 tRNA Cag_t13 NC_007514.1 539473 539545 D tRNA-Lys 539473..539545 Chlorobium chlorochromatii CaD3 5469408 Cag_t14 tRNA Cag_t14 NC_007514.1 539576 539657 D tRNA-Leu 539576..539657 Chlorobium chlorochromatii CaD3 5469410 Cag_t15 tRNA Cag_t15 NC_007514.1 570229 570318 R tRNA-Ser complement(570229..570318) Chlorobium chlorochromatii CaD3 5469421 Cag_t16 tRNA Cag_t16 NC_007514.1 570333 570415 R tRNA-Ser complement(570333..570415) Chlorobium chlorochromatii CaD3 5469386 Cag_t17 tRNA Cag_t17 NC_007514.1 570522 570612 R tRNA-Ser complement(570522..570612) Chlorobium chlorochromatii CaD3 5469387 Cag_t18 tRNA Cag_t18 NC_007514.1 614696 614771 R tRNA-Ala complement(614696..614771) Chlorobium chlorochromatii CaD3 5469407 Cag_t19 tRNA Cag_t19 NC_007514.1 904266 904353 R tRNA-Leu complement(904266..904353) Chlorobium chlorochromatii CaD3 5469389 Cag_t20 tRNA Cag_t20 NC_007514.1 904368 904452 R tRNA-Leu complement(904368..904452) Chlorobium chlorochromatii CaD3 5469388 Cag_t21 tRNA Cag_t21 NC_007514.1 1161857 1161943 D tRNA-Ser 1161857..1161943 Chlorobium chlorochromatii CaD3 5469404 Cag_t22 tRNA Cag_t22 NC_007514.1 1264724 1264800 D tRNA-Met 1264724..1264800 Chlorobium chlorochromatii CaD3 5469427 Cag_t23 tRNA Cag_t23 NC_007514.1 1264812 1264887 D tRNA-Gly 1264812..1264887 Chlorobium chlorochromatii CaD3 5469384 Cag_t24 tRNA Cag_t24 NC_007514.1 1300530 1300606 D tRNA-Val 1300530..1300606 Chlorobium chlorochromatii CaD3 5469428 Cag_t25 tRNA Cag_t25 NC_007514.1 1498748 1498832 D tRNA-Leu 1498748..1498832 Chlorobium chlorochromatii CaD3 5469413 Cag_t26 tRNA Cag_t26 NC_007514.1 1501918 1501991 D tRNA-Cys 1501918..1501991 Chlorobium chlorochromatii CaD3 5469414 Cag_t27 tRNA Cag_t27 NC_007514.1 1582093 1582168 R tRNA-Pro complement(1582093..1582168) Chlorobium chlorochromatii CaD3 5469424 Cag_t28 tRNA Cag_t28 NC_007514.1 1582178 1582253 R tRNA-Arg complement(1582178..1582253) Chlorobium chlorochromatii CaD3 5469403 Cag_t29 tRNA Cag_t29 NC_007514.1 1613413 1613498 D tRNA-Leu 1613413..1613498 Chlorobium chlorochromatii CaD3 5469426 Cag_t30 tRNA Cag_t30 NC_007514.1 1748934 1749010 D tRNA-Met 1748934..1749010 Chlorobium chlorochromatii CaD3 5469420 Cag_t31 tRNA Cag_t31 NC_007514.1 1749027 1749100 D tRNA-Glu 1749027..1749100 Chlorobium chlorochromatii CaD3 5469396 Cag_t32 tRNA Cag_t32 NC_007514.1 1749108 1749184 D tRNA-Arg 1749108..1749184 Chlorobium chlorochromatii CaD3 5469397 Cag_t33 tRNA Cag_t33 NC_007514.1 1749199 1749275 D tRNA-Gln 1749199..1749275 Chlorobium chlorochromatii CaD3 5469398 Cag_t34 tRNA Cag_t34 NC_007514.1 1760904 1760979 R tRNA-Gly complement(1760904..1760979) Chlorobium chlorochromatii CaD3 5469395 Cag_t35 tRNA Cag_t35 NC_007514.1 1867271 1867346 R tRNA-Met complement(1867271..1867346) Chlorobium chlorochromatii CaD3 5469402 Cag_t36 tRNA Cag_t36 NC_007514.1 2008021 2008096 R tRNA-Lys complement(2008021..2008096) Chlorobium chlorochromatii CaD3 5469405 Cag_t37 tRNA Cag_t37 NC_007514.1 2025159 2025233 R tRNA-Glu complement(2025159..2025233) Chlorobium chlorochromatii CaD3 5469412 Cag_t38 tRNA Cag_t38 NC_007514.1 2025247 2025323 R tRNA-His complement(2025247..2025323) Chlorobium chlorochromatii CaD3 5469390 Cag_t39 tRNA Cag_t39 NC_007514.1 2025346 2025421 R tRNA-Arg complement(2025346..2025421) Chlorobium chlorochromatii CaD3 5469422 Cag_t40 tRNA Cag_t40 NC_007514.1 2025445 2025517 R tRNA-Pro complement(2025445..2025517) Chlorobium chlorochromatii CaD3 5469423 Cag_t41 tRNA Cag_t41 NC_007514.1 2030701 2030775 R tRNA-Gln complement(2030701..2030775) Chlorobium chlorochromatii CaD3 5469411 Cag_t42 tRNA Cag_t42 NC_007514.1 2060078 2060151 R tRNA-Pro complement(2060078..2060151) Chlorobium chlorochromatii CaD3 5469385 Cag_t43 tRNA Cag_t43 NC_007514.1 2165727 2165798 D tRNA-Asn 2165727..2165798 Chlorobium chlorochromatii CaD3 5469399 Cag_t44 tRNA Cag_t44 NC_007514.1 2354631 2354706 R tRNA-Gly complement(2354631..2354706) Chlorobium chlorochromatii CaD3 5469419 Cag_t45 tRNA Cag_t45 NC_007514.1 2554003 2554075 D tRNA-Thr 2554003..2554075 Chlorobium chlorochromatii CaD3 5469401 Cag_r1 rRNA Cag_r1 NC_007514.1 102592 104100 D 16S ribosomal RNA 102592..104100 Chlorobium chlorochromatii CaD3 4794296 Cag_r2 rRNA Cag_r2 NC_007514.1 104552 107472 D 23S ribosomal RNA 104552..107472 Chlorobium chlorochromatii CaD3 4794294 Cag_r3 rRNA Cag_r3 NC_007514.1 107553 107670 D 5S ribosomal RNA 107553..107670 Chlorobium chlorochromatii CaD3 4794295