-- dump date 20140619_035011 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 907271000001 SEQ_END SEQ_END NC_021898.1 1038839 1038839 DR NC_021898.1; contig end 1038839..1038839 Chlamydia trachomatis RC-J/966 YP_008353558.1 CDS CTRC966_00005 NC_021898.1 1038243 1176 D hypothetical protein join(1038243..1038839,1..1176) Chlamydia trachomatis RC-J/966 16429074 YP_008353559.1 CDS CTRC966_00010 NC_021898.1 1321 1593 R COG2155 Uncharacterized conserved protein; hypothetical protein complement(1321..1593) Chlamydia trachomatis RC-J/966 16429088 YP_008353560.1 CDS gatC NC_021898.1 1794 2096 D COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 1794..2096 Chlamydia trachomatis RC-J/966 16429073 YP_008353561.1 CDS gatA NC_021898.1 2108 3583 D COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A 2108..3583 Chlamydia trachomatis RC-J/966 16429089 YP_008353562.1 CDS gatB NC_021898.1 3585 5051 D COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B 3585..5051 Chlamydia trachomatis RC-J/966 16429090 YP_008353563.1 CDS CTRC966_00030 NC_021898.1 5150 6241 R hypothetical protein complement(5150..6241) Chlamydia trachomatis RC-J/966 16429091 YP_008353564.1 CDS CTRC966_00035 NC_021898.1 6369 6938 R hypothetical protein complement(6369..6938) Chlamydia trachomatis RC-J/966 16429092 YP_008353565.1 CDS CTRC966_00040 NC_021898.1 7093 7221 D hypothetical protein 7093..7221 Chlamydia trachomatis RC-J/966 16429093 YP_008353566.1 CDS CTRC966_00045 NC_021898.1 7252 8202 D hypothetical protein 7252..8202 Chlamydia trachomatis RC-J/966 16429094 YP_008353567.1 CDS CTRC966_00050 NC_021898.1 8218 9120 R COG1039 Ribonuclease HIII; ribonuclease HIII complement(8218..9120) Chlamydia trachomatis RC-J/966 16429095 YP_008353568.1 CDS CTRC966_00055 NC_021898.1 9376 9807 D COG1426 Uncharacterized protein conserved in bacteria; hypothetical protein 9376..9807 Chlamydia trachomatis RC-J/966 16429096 YP_008353569.1 CDS CTRC966_00060 NC_021898.1 9794 11161 R COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase complement(9794..11161) Chlamydia trachomatis RC-J/966 16429097 YP_008353570.1 CDS CTRC966_00065 NC_021898.1 11293 12549 R hypothetical protein complement(11293..12549) Chlamydia trachomatis RC-J/966 16429098 YP_008353571.1 CDS CTRC966_00070 NC_021898.1 12546 13340 R COG1624 Uncharacterized conserved protein; putative integral membrane protein complement(12546..13340) Chlamydia trachomatis RC-J/966 16429099 YP_008353572.1 CDS CTRC966_00075 NC_021898.1 13615 14955 D COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome d ubiquinol oxidase subunit I 13615..14955 Chlamydia trachomatis RC-J/966 16429100 YP_008353573.1 CDS CTRC966_00080 NC_021898.1 14967 16028 D COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome d ubiquinol oxidase subunit II 14967..16028 Chlamydia trachomatis RC-J/966 16429101 YP_008353574.1 CDS CTRC966_00085 NC_021898.1 16126 17430 R COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH; hypothetical protein complement(16126..17430) Chlamydia trachomatis RC-J/966 16429102 YP_008353575.1 CDS CTRC966_00090 NC_021898.1 17639 18367 D hypothetical protein 17639..18367 Chlamydia trachomatis RC-J/966 16429103 YP_008353576.1 CDS CTRC966_00095 NC_021898.1 18553 19854 D COG3103 SH3 domain protein; hypothetical protein 18553..19854 Chlamydia trachomatis RC-J/966 16429104 YP_008353577.1 CDS CTRC966_00100 NC_021898.1 19916 20389 R hypothetical protein complement(19916..20389) Chlamydia trachomatis RC-J/966 16429105 YP_008353578.1 CDS CTRC966_00105 NC_021898.1 20375 20533 D hypothetical protein 20375..20533 Chlamydia trachomatis RC-J/966 16429106 YP_008353579.1 CDS ileS NC_021898.1 21435 24545 D COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 21435..24545 Chlamydia trachomatis RC-J/966 16429107 YP_008353580.1 CDS CTRC966_00115 NC_021898.1 24603 26489 R COG0681 Signal peptidase I; signal peptidase I complement(24603..26489) Chlamydia trachomatis RC-J/966 16429108 YP_008353581.1 CDS CTRC966_00120 NC_021898.1 26675 27418 R hypothetical protein complement(26675..27418) Chlamydia trachomatis RC-J/966 16429109 YP_008353582.1 CDS rpmE2 NC_021898.1 27494 27820 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 type B 27494..27820 Chlamydia trachomatis RC-J/966 16429110 YP_008353583.1 CDS prfA NC_021898.1 28008 29087 D COG0216 Protein chain release factor A; peptide chain release factor 1 28008..29087 Chlamydia trachomatis RC-J/966 16429111 YP_008353584.1 CDS CTRC966_00135 NC_021898.1 29071 29943 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 29071..29943 Chlamydia trachomatis RC-J/966 16429112 YP_008353585.1 CDS CTRC966_00140 NC_021898.1 29940 31286 D COG0541 Signal recognition particle GTPase; signal recognition particle protein 29940..31286 Chlamydia trachomatis RC-J/966 16429113 YP_008353586.1 CDS rpsP NC_021898.1 31277 31627 D COG0228 Ribosomal protein S16; 30S ribosomal protein S16 31277..31627 Chlamydia trachomatis RC-J/966 16429114 YP_008353587.1 CDS trmD NC_021898.1 31643 32701 D COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein 31643..32701 Chlamydia trachomatis RC-J/966 16429115 YP_008353588.1 CDS rplS NC_021898.1 32727 33092 D COG0335 Ribosomal protein L19; 50S ribosomal protein L19 32727..33092 Chlamydia trachomatis RC-J/966 16429116 YP_008353589.1 CDS rnhB NC_021898.1 33156 33809 D COG0164 Ribonuclease HII; ribonuclease HII 33156..33809 Chlamydia trachomatis RC-J/966 16429117 YP_008353590.1 CDS gmk NC_021898.1 33800 34417 D COG0194 Guanylate kinase; guanylate kinase 33800..34417 Chlamydia trachomatis RC-J/966 16429118 YP_008353591.1 CDS CTRC966_00170 NC_021898.1 34410 34712 D hypothetical protein 34410..34712 Chlamydia trachomatis RC-J/966 16429119 YP_008353592.1 CDS CTRC966_00175 NC_021898.1 34712 36364 D COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase 34712..36364 Chlamydia trachomatis RC-J/966 16429120 YP_008353593.1 CDS CTRC966_00180 NC_021898.1 36503 38743 R COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; exodeoxyribonuclease V alpha chain complement(36503..38743) Chlamydia trachomatis RC-J/966 16429121 YP_008353594.1 CDS CTRC966_00185 NC_021898.1 38991 40013 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; drug/metabolite exporter family protein complement(38991..40013) Chlamydia trachomatis RC-J/966 16429122 YP_008353595.1 CDS CTRC966_00190 NC_021898.1 40354 41127 D COG4285 Uncharacterized conserved protein; putative protein ligase 40354..41127 Chlamydia trachomatis RC-J/966 16429123 YP_008353596.1 CDS CTRC966_00195 NC_021898.1 41092 42249 R hypothetical protein complement(41092..42249) Chlamydia trachomatis RC-J/966 16429124 YP_008353597.1 CDS CTRC966_00200 NC_021898.1 42795 43139 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; hypothetical protein complement(42795..43139) Chlamydia trachomatis RC-J/966 16429126 YP_008353598.1 CDS dcd NC_021898.1 43161 43733 R COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase complement(43161..43733) Chlamydia trachomatis RC-J/966 16429127 YP_008353599.1 CDS CTRC966_00210 NC_021898.1 43820 43972 D hypothetical protein 43820..43972 Chlamydia trachomatis RC-J/966 16429128 YP_008353600.1 CDS ruvB NC_021898.1 44014 45018 D COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB 44014..45018 Chlamydia trachomatis RC-J/966 16429129 YP_008353601.1 CDS CTRC966_00220 NC_021898.1 45020 45832 D COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain; hypothetical protein 45020..45832 Chlamydia trachomatis RC-J/966 16429130 YP_008353602.1 CDS CTRC966_00225 NC_021898.1 45893 47893 R COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; putative glycosyl hydrolase complement(45893..47893) Chlamydia trachomatis RC-J/966 16429131 YP_008353603.1 CDS CTRC966_00230 NC_021898.1 48014 48517 R putative type III secretion system chaperone complement(48014..48517) Chlamydia trachomatis RC-J/966 16429132 YP_008353604.1 CDS CTRC966_00235 NC_021898.1 48983 49456 D COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein 48983..49456 Chlamydia trachomatis RC-J/966 16429133 YP_008353605.1 CDS CTRC966_00240 NC_021898.1 49443 49568 D hypothetical protein 49443..49568 Chlamydia trachomatis RC-J/966 16429134 YP_008353606.1 CDS CTRC966_00245 NC_021898.1 49799 51298 D COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A 49799..51298 Chlamydia trachomatis RC-J/966 16429135 YP_008353607.1 CDS CTRC966_00250 NC_021898.1 51442 52107 D histone-like protein 2 51442..52107 Chlamydia trachomatis RC-J/966 16429136 YP_008353608.1 CDS CTRC966_00255 NC_021898.1 52262 53206 D COG1466 DNA polymerase III, delta subunit; hypothetical protein 52262..53206 Chlamydia trachomatis RC-J/966 16429137 YP_008353609.1 CDS CTRC966_00260 NC_021898.1 53301 54014 D COG0313 Predicted methyltransferases; hypothetical protein 53301..54014 Chlamydia trachomatis RC-J/966 16429138 YP_008353610.1 CDS CTRC966_00265 NC_021898.1 54105 55577 D hypothetical protein 54105..55577 Chlamydia trachomatis RC-J/966 16429139 YP_008353611.1 CDS CTRC966_00270 NC_021898.1 55814 56338 D hypothetical protein 55814..56338 Chlamydia trachomatis RC-J/966 16429140 YP_008353612.1 CDS CTRC966_00275 NC_021898.1 57607 58149 D hypothetical protein 57607..58149 Chlamydia trachomatis RC-J/966 16429141 YP_008353613.1 CDS CTRC966_00280 NC_021898.1 59091 60221 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(59091..60221) Chlamydia trachomatis RC-J/966 16429142 YP_008353614.1 CDS CTRC966_00285 NC_021898.1 60211 60657 R hypothetical protein complement(60211..60657) Chlamydia trachomatis RC-J/966 16429143 YP_008353615.1 CDS CTRC966_00290 NC_021898.1 60710 60847 R hypothetical protein complement(60710..60847) Chlamydia trachomatis RC-J/966 16429144 YP_008353616.1 CDS sucA NC_021898.1 60989 63700 D COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; 2-oxoglutarate dehydrogenase E1 component 60989..63700 Chlamydia trachomatis RC-J/966 16429145 YP_008353617.1 CDS CTRC966_00300 NC_021898.1 63704 64801 D COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide succinyltransferase 63704..64801 Chlamydia trachomatis RC-J/966 16429146 YP_008353618.1 CDS CTRC966_00305 NC_021898.1 64830 65561 R COG1496 Uncharacterized conserved protein; multicopper polyphenol oxidase complement(64830..65561) Chlamydia trachomatis RC-J/966 16429147 YP_008353619.1 CDS CTRC966_00310 NC_021898.1 65570 67378 R COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(65570..67378) Chlamydia trachomatis RC-J/966 16429148 YP_008353620.1 CDS CTRC966_00315 NC_021898.1 67530 68621 R hypothetical protein complement(67530..68621) Chlamydia trachomatis RC-J/966 16429149 YP_008353621.1 CDS CTRC966_00320 NC_021898.1 68701 68976 R COG0633 Ferredoxin; ferredoxin complement(68701..68976) Chlamydia trachomatis RC-J/966 16429150 YP_008353622.1 CDS CTRC966_00325 NC_021898.1 69158 70975 D COG1298 Flagellar biosynthesis pathway, component FlhA; type III secretion system protein 69158..70975 Chlamydia trachomatis RC-J/966 16429152 YP_008353623.1 CDS CTRC966_00330 NC_021898.1 71083 71844 D COG1191 DNA-directed RNA polymerase specialized sigma subunit; RNA polymerase sigma factor sigma-28 71083..71844 Chlamydia trachomatis RC-J/966 16429153 YP_008353624.1 CDS CTRC966_00335 NC_021898.1 72003 73241 D COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 72003..73241 Chlamydia trachomatis RC-J/966 16429154 YP_008353625.1 CDS CTRC966_00340 NC_021898.1 73251 74693 D COG0362 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 73251..74693 Chlamydia trachomatis RC-J/966 16429155 YP_008353626.1 CDS CTRC966_00345 NC_021898.1 74754 76562 R COG0481 Membrane GTPase LepA; GTP-binding protein LepA complement(74754..76562) Chlamydia trachomatis RC-J/966 16429156 YP_008353627.1 CDS CTRC966_00350 NC_021898.1 76748 78334 R COG3202 ATP/ADP translocase; ADP,ATP carrier protein complement(76748..78334) Chlamydia trachomatis RC-J/966 16429157 YP_008353628.1 CDS CTRC966_00355 NC_021898.1 78486 78638 D hypothetical protein 78486..78638 Chlamydia trachomatis RC-J/966 16429158 YP_008353629.1 CDS CTRC966_00360 NC_021898.1 78685 79161 R hypothetical protein complement(78685..79161) Chlamydia trachomatis RC-J/966 16429159 YP_008353630.1 CDS CTRC966_00365 NC_021898.1 79822 80802 D COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; ABC transport protein, solute binding component 79822..80802 Chlamydia trachomatis RC-J/966 16429160 YP_008353631.1 CDS CTRC966_00370 NC_021898.1 80795 81574 D COG1121 ABC-type Mn/Zn transport systems, ATPase component; ABC transport protein, ATP-binding component 80795..81574 Chlamydia trachomatis RC-J/966 16429161 YP_008353632.1 CDS CTRC966_00375 NC_021898.1 81575 82930 D COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; ABC transport protein, membrane permease 81575..82930 Chlamydia trachomatis RC-J/966 16429162 YP_008353633.1 CDS CTRC966_00380 NC_021898.1 82920 83876 D COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; ABC transport protein, membrane permease 82920..83876 Chlamydia trachomatis RC-J/966 16429163 YP_008353634.1 CDS CTRC966_00385 NC_021898.1 83903 85042 D COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 83903..85042 Chlamydia trachomatis RC-J/966 16429164 YP_008353635.1 CDS CTRC966_00390 NC_021898.1 85238 87097 D COG0750 Predicted membrane-associated Zn-dependent proteases 1; putative protease 85238..87097 Chlamydia trachomatis RC-J/966 16429165 YP_008353636.1 CDS CTRC966_00395 NC_021898.1 87044 88021 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); exported protein complement(87044..88021) Chlamydia trachomatis RC-J/966 16429166 YP_008353637.1 CDS recF NC_021898.1 88179 89276 R COG1195 Recombinational DNA repair ATPase (RecF pathway); recombination protein F complement(88179..89276) Chlamydia trachomatis RC-J/966 16429167 YP_008353638.1 CDS CTRC966_00405 NC_021898.1 89276 90376 R COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta complement(89276..90376) Chlamydia trachomatis RC-J/966 16429168 YP_008353639.1 CDS smpB NC_021898.1 90656 91111 D COG0691 tmRNA-binding protein; SsrA-binding protein 90656..91111 Chlamydia trachomatis RC-J/966 16429169 YP_008353640.1 CDS CTRC966_00415 NC_021898.1 91089 92039 R COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; thiamine biosynthesis lipoprotein complement(91089..92039) Chlamydia trachomatis RC-J/966 16429170 YP_008353641.1 CDS CTRC966_00420 NC_021898.1 92009 92872 R COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(92009..92872) Chlamydia trachomatis RC-J/966 16429171 YP_008353642.1 CDS CTRC966_00425 NC_021898.1 92990 93385 R putative integral membrane protein complement(92990..93385) Chlamydia trachomatis RC-J/966 16429172 YP_008353643.1 CDS CTRC966_00430 NC_021898.1 93710 94003 D late transcription unit B protein 93710..94003 Chlamydia trachomatis RC-J/966 16429173 YP_008353644.1 CDS CTRC966_00435 NC_021898.1 94366 96048 D hypothetical protein 94366..96048 Chlamydia trachomatis RC-J/966 16429174 YP_008353645.1 CDS CTRC966_00440 NC_021898.1 96045 96527 D hypothetical protein 96045..96527 Chlamydia trachomatis RC-J/966 16429175 YP_008353646.1 CDS CTRC966_00445 NC_021898.1 96541 97626 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein complement(96541..97626) Chlamydia trachomatis RC-J/966 16429176 YP_008353647.1 CDS CTRC966_00450 NC_021898.1 97797 99536 R COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; putative decarboxylase complement(97797..99536) Chlamydia trachomatis RC-J/966 16429177 YP_008353648.1 CDS rpmB NC_021898.1 99656 99925 R COG0227 Ribosomal protein L28; 50S ribosomal protein L28 complement(99656..99925) Chlamydia trachomatis RC-J/966 16429178 YP_008353649.1 CDS CTRC966_00460 NC_021898.1 100074 101657 R COG1640 4-alpha-glucanotransferase; 4-alpha-glucanotransferase complement(100074..101657) Chlamydia trachomatis RC-J/966 16429179 YP_008353650.1 CDS CTRC966_00465 NC_021898.1 101661 102101 R type III secretion chaperone complement(101661..102101) Chlamydia trachomatis RC-J/966 16429180 YP_008353651.1 CDS CTRC966_00470 NC_021898.1 102139 103404 R low calcium response E complement(102139..103404) Chlamydia trachomatis RC-J/966 16429181 YP_008353652.1 CDS CTRC966_00475 NC_021898.1 103422 105548 R COG4789 Type III secretory pathway, component EscV; low calcium response protein D (predicted to be part of the TTSS apparatus) complement(103422..105548) Chlamydia trachomatis RC-J/966 16429182 YP_008353653.1 CDS CTRC966_00480 NC_021898.1 105548 106630 R COG1377 Flagellar biosynthesis pathway, component FlhB; type III secretion system protein complement(105548..106630) Chlamydia trachomatis RC-J/966 16429183 YP_008353654.1 CDS CTRC966_00485 NC_021898.1 106887 107987 D COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF 106887..107987 Chlamydia trachomatis RC-J/966 16429184 YP_008353655.1 CDS CTRC966_00490 NC_021898.1 107996 108901 R COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase complement(107996..108901) Chlamydia trachomatis RC-J/966 16429185 YP_008353656.1 CDS truB NC_021898.1 108858 109583 R COG0130 Pseudouridine synthase; tRNA pseudouridine synthase B complement(108858..109583) Chlamydia trachomatis RC-J/966 16429186 YP_008353657.1 CDS rbfA NC_021898.1 109621 109992 R COG0858 Ribosome-binding factor A; ribosome-binding factor A complement(109621..109992) Chlamydia trachomatis RC-J/966 16429187 YP_008353658.1 CDS infB NC_021898.1 109999 112689 R COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 complement(109999..112689) Chlamydia trachomatis RC-J/966 16429188 YP_008353659.1 CDS nusA NC_021898.1 112646 113950 R COG0195 Transcription elongation factor; transcription elongation factor NusA complement(112646..113950) Chlamydia trachomatis RC-J/966 16429189 YP_008353660.1 CDS rpsA NC_021898.1 114068 115777 R COG0539 Ribosomal protein S1; 30S ribosomal protein S1 complement(114068..115777) Chlamydia trachomatis RC-J/966 16429190 YP_008353661.1 CDS CTRC966_00520 NC_021898.1 116022 117077 D COG0492 Thioredoxin reductase; thioredoxin reductase 116022..117077 Chlamydia trachomatis RC-J/966 16429191 YP_008353662.1 CDS acpS NC_021898.1 117083 117442 D COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase 117083..117442 Chlamydia trachomatis RC-J/966 16429192 YP_008353663.1 CDS CTRC966_00530 NC_021898.1 117443 117904 R hypothetical protein complement(117443..117904) Chlamydia trachomatis RC-J/966 16429193 YP_008353664.1 CDS CTRC966_00535 NC_021898.1 118040 118501 D hypothetical protein 118040..118501 Chlamydia trachomatis RC-J/966 16429194 YP_008353665.1 CDS CTRC966_00540 NC_021898.1 118536 119432 D COG0561 Predicted hydrolases of the HAD superfamily; hypothetical protein 118536..119432 Chlamydia trachomatis RC-J/966 16429195 YP_008353666.1 CDS CTRC966_00545 NC_021898.1 119422 120318 R COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-(acyl carrier protein) reductase complement(119422..120318) Chlamydia trachomatis RC-J/966 16429196 YP_008353667.1 CDS CTRC966_00550 NC_021898.1 120630 122600 D hypothetical protein 120630..122600 Chlamydia trachomatis RC-J/966 16429197 YP_008353668.1 CDS CTRC966_00555 NC_021898.1 122800 123624 R COG0564 Pseudouridylate synthases, 23S RNA-specific; tRNA pseudouridine synthase A complement(122800..123624) Chlamydia trachomatis RC-J/966 16429198 YP_008353669.1 CDS CTRC966_00560 NC_021898.1 123671 124777 D COG1194 A/G-specific DNA glycosylase; A/G-specific adenine glycosylase 123671..124777 Chlamydia trachomatis RC-J/966 16429199 YP_008353670.1 CDS CTRC966_00565 NC_021898.1 124831 125586 D COG0327 Uncharacterized conserved protein; hypothetical protein 124831..125586 Chlamydia trachomatis RC-J/966 16429200 YP_008353671.1 CDS CTRC966_00570 NC_021898.1 125599 126387 R hypothetical protein complement(125599..126387) Chlamydia trachomatis RC-J/966 16429201 YP_008353672.1 CDS groEL NC_021898.1 126516 128150 R COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL complement(126516..128150) Chlamydia trachomatis RC-J/966 16429202 YP_008353673.1 CDS groES NC_021898.1 128189 128497 R COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES complement(128189..128497) Chlamydia trachomatis RC-J/966 16429203 YP_008353674.1 CDS CTRC966_00585 NC_021898.1 128517 128645 R hypothetical protein complement(128517..128645) Chlamydia trachomatis RC-J/966 16429204 YP_008353675.1 CDS CTRC966_00590 NC_021898.1 128669 130495 R COG1164 Oligoendopeptidase F; oligoendopeptidase F complement(128669..130495) Chlamydia trachomatis RC-J/966 16429205 YP_008353676.1 CDS CTRC966_00595 NC_021898.1 130506 130619 R hypothetical protein complement(130506..130619) Chlamydia trachomatis RC-J/966 16429206 YP_008353677.1 CDS CTRC966_00600 NC_021898.1 130797 133400 D COG0542 ATPases with chaperone activity, ATP-binding subunit; chaperone-protease ClpB 130797..133400 Chlamydia trachomatis RC-J/966 16429207 YP_008353678.1 CDS CTRC966_00605 NC_021898.1 133426 134886 D COG2912 Uncharacterized conserved protein; hypothetical protein 133426..134886 Chlamydia trachomatis RC-J/966 16429208 YP_008353679.1 CDS CTRC966_00610 NC_021898.1 135114 135554 D inclusion membrane protein D 135114..135554 Chlamydia trachomatis RC-J/966 16429209 YP_008353680.1 CDS CTRC966_00615 NC_021898.1 135621 136019 D inclusion membrane protein E 135621..136019 Chlamydia trachomatis RC-J/966 16429210 YP_008353681.1 CDS CTRC966_00620 NC_021898.1 136036 136338 D inclusion membrane protein F 136036..136338 Chlamydia trachomatis RC-J/966 16429211 YP_008353682.1 CDS CTRC966_00625 NC_021898.1 136425 136928 D inclusion membrane protein G 136425..136928 Chlamydia trachomatis RC-J/966 16429212 YP_008353683.1 CDS CTRC966_00630 NC_021898.1 137095 137916 R COG1196 Chromosome segregation ATPases; inclusion membrane protein A complement(137095..137916) Chlamydia trachomatis RC-J/966 16429213 YP_008353684.1 CDS CTRC966_00635 NC_021898.1 137962 138237 R hypothetical protein complement(137962..138237) Chlamydia trachomatis RC-J/966 16429214 YP_008353685.1 CDS CTRC966_00640 NC_021898.1 138336 139022 D COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 138336..139022 Chlamydia trachomatis RC-J/966 16429215 YP_008353686.1 CDS CTRC966_00645 NC_021898.1 139009 139566 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 139009..139566 Chlamydia trachomatis RC-J/966 16429216 YP_008353687.1 CDS CTRC966_00650 NC_021898.1 139579 140073 D COG0511 Biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 139579..140073 Chlamydia trachomatis RC-J/966 16429217 YP_008353688.1 CDS CTRC966_00655 NC_021898.1 140077 141450 D COG0439 Biotin carboxylase; acetyl-CoA carboxylase biotin carboxylase subunit 140077..141450 Chlamydia trachomatis RC-J/966 16429218 YP_008353689.1 CDS CTRC966_00660 NC_021898.1 141491 141598 R hypothetical protein complement(141491..141598) Chlamydia trachomatis RC-J/966 16429219 YP_008353690.1 CDS rplM NC_021898.1 141673 142125 D COG0102 Ribosomal protein L13; 50S ribosomal protein L13 141673..142125 Chlamydia trachomatis RC-J/966 16429220 YP_008353691.1 CDS rpsI NC_021898.1 142151 142540 D COG0103 Ribosomal protein S9; 30S ribosomal protein S9 142151..142540 Chlamydia trachomatis RC-J/966 16429221 YP_008353692.1 CDS CTRC966_00675 NC_021898.1 142588 143439 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); chitinase complement(142588..143439) Chlamydia trachomatis RC-J/966 16429222 YP_008353693.1 CDS adk NC_021898.1 143535 144272 R COG0563 Adenylate kinase and related kinases; adenylate kinase complement(143535..144272) Chlamydia trachomatis RC-J/966 16429223 YP_008353694.1 CDS CTRC966_00685 NC_021898.1 144479 145123 D COG0765 ABC-type amino acid transport system, permease component; putative ABC-membrane transport protein, inner membrane component 144479..145123 Chlamydia trachomatis RC-J/966 16429224 YP_008353695.1 CDS CTRC966_00690 NC_021898.1 145120 145821 D COG1126 ABC-type polar amino acid transport system, ATPase component; ABC transporter, ATP-binding component 145120..145821 Chlamydia trachomatis RC-J/966 16429225 YP_008353696.1 CDS CTRC966_00695 NC_021898.1 145824 149240 R hypothetical protein complement(145824..149240) Chlamydia trachomatis RC-J/966 16429226 YP_008353697.1 CDS CTRC966_00700 NC_021898.1 149237 150514 R COG1295 Predicted membrane protein; hypothetical protein complement(149237..150514) Chlamydia trachomatis RC-J/966 16429227 YP_008353698.1 CDS CTRC966_00705 NC_021898.1 150593 151396 R COG0500 SAM-dependent methyltransferases; putative methyltransferase complement(150593..151396) Chlamydia trachomatis RC-J/966 16429228 YP_008353699.1 CDS CTRC966_00710 NC_021898.1 151852 152265 D hypothetical protein 151852..152265 Chlamydia trachomatis RC-J/966 16429229 YP_008353700.1 CDS CTRC966_00715 NC_021898.1 152323 153405 D hypothetical protein 152323..153405 Chlamydia trachomatis RC-J/966 16429230 YP_008353701.1 CDS CTRC966_00720 NC_021898.1 153495 154214 D COG0400 Predicted esterase; putative phospholipase-carboxylesterase family protein 153495..154214 Chlamydia trachomatis RC-J/966 16429231 YP_008353702.1 CDS CTRC966_00725 NC_021898.1 154233 155078 D COG0009 Putative translation factor (SUA5); hypothetical protein 154233..155078 Chlamydia trachomatis RC-J/966 16429232 YP_008353703.1 CDS CTRC966_00730 NC_021898.1 155056 156003 D COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog; microsomal dipeptidase 155056..156003 Chlamydia trachomatis RC-J/966 16429233 YP_008353704.1 CDS CTRC966_00735 NC_021898.1 156000 157280 R COG0747 ABC-type dipeptide transport system, periplasmic component; oligopeptide transport system binding protein complement(156000..157280) Chlamydia trachomatis RC-J/966 16429234 YP_008353705.1 CDS CTRC966_00740 NC_021898.1 157456 158142 D COG1738 Uncharacterized conserved protein; exported protein 157456..158142 Chlamydia trachomatis RC-J/966 16429235 YP_008353706.1 CDS CTRC966_00745 NC_021898.1 158326 158772 D protein translocase 158326..158772 Chlamydia trachomatis RC-J/966 16429236 YP_008353707.1 CDS CTRC966_00755 NC_021898.1 159172 160029 D hypothetical protein 159172..160029 Chlamydia trachomatis RC-J/966 16429239 YP_008353708.1 CDS CTRC966_00760 NC_021898.1 160031 160873 D hypothetical protein 160031..160873 Chlamydia trachomatis RC-J/966 16429240 YP_008353709.1 CDS CTRC966_00765 NC_021898.1 160873 161739 D hypothetical protein 160873..161739 Chlamydia trachomatis RC-J/966 16429241 YP_008353710.1 CDS CTRC966_00770 NC_021898.1 161925 163769 D COG0515 Serine/threonine protein kinase; serine-threonine-protein kinase 161925..163769 Chlamydia trachomatis RC-J/966 16429242 YP_008353711.1 CDS ligA NC_021898.1 163780 165771 D COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA 163780..165771 Chlamydia trachomatis RC-J/966 16429243 YP_008353712.1 CDS CTRC966_00780 NC_021898.1 165869 170218 D putative integral membrane protein 165869..170218 Chlamydia trachomatis RC-J/966 16429244 YP_008353713.1 CDS CTRC966_00785 NC_021898.1 170281 171804 R COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; FAD-dependent monooxygenase complement(170281..171804) Chlamydia trachomatis RC-J/966 16429245 YP_008353714.1 CDS CTRC966_00790 NC_021898.1 172004 172951 R COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein complement(172004..172951) Chlamydia trachomatis RC-J/966 16429246 YP_008353715.1 CDS rpmG NC_021898.1 173350 173508 D COG0267 Ribosomal protein L33; 50S ribosomal protein L33 173350..173508 Chlamydia trachomatis RC-J/966 16429247 YP_008353716.1 CDS CTRC966_00800 NC_021898.1 173544 175055 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein releasing systen, inner membrane component 173544..175055 Chlamydia trachomatis RC-J/966 16429248 YP_008353717.1 CDS CTRC966_00805 NC_021898.1 175060 175737 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; lipoprotein release ATP-binding component 175060..175737 Chlamydia trachomatis RC-J/966 16429249 YP_008353718.1 CDS CTRC966_00810 NC_021898.1 175888 178320 R MAC/perforin family protein complement(175888..178320) Chlamydia trachomatis RC-J/966 16429250 YP_008353719.1 CDS CTRC966_00825 NC_021898.1 180057 180995 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein complement(180057..180995) Chlamydia trachomatis RC-J/966 16429251 YP_008353720.1 CDS CTRC966_00830 NC_021898.1 181509 182714 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein complement(181509..182714) Chlamydia trachomatis RC-J/966 16429252 YP_008353721.1 CDS CTRC966_00835 NC_021898.1 182837 183478 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase D endonuclease superfamily protein complement(182837..183478) Chlamydia trachomatis RC-J/966 16429253 YP_008353722.1 CDS CTRC966_00840 NC_021898.1 183774 183884 D hypothetical protein 183774..183884 Chlamydia trachomatis RC-J/966 16429254 YP_008353723.1 CDS CTRC966_00845 NC_021898.1 184058 184339 R hypothetical protein complement(184058..184339) Chlamydia trachomatis RC-J/966 16429255 YP_008353724.1 CDS CTRC966_00850 NC_021898.1 184598 185068 R hypothetical protein complement(184598..185068) Chlamydia trachomatis RC-J/966 16429256 YP_008353725.1 CDS CTRC966_00855 NC_021898.1 185061 185807 R hypothetical protein complement(185061..185807) Chlamydia trachomatis RC-J/966 16429257 YP_008353726.1 CDS CTRC966_00860 NC_021898.1 185940 186188 R hypothetical protein complement(185940..186188) Chlamydia trachomatis RC-J/966 16429258 YP_008353727.1 CDS CTRC966_00865 NC_021898.1 186418 187947 D hypothetical protein 186418..187947 Chlamydia trachomatis RC-J/966 16429259 YP_008353728.1 CDS CTRC966_00880 NC_021898.1 189162 189446 D COG2973 Trp operon repressor; Trp operon repressor 189162..189446 Chlamydia trachomatis RC-J/966 16429260 YP_008353729.1 CDS CTRC966_00885 NC_021898.1 189487 189666 D hypothetical protein 189487..189666 Chlamydia trachomatis RC-J/966 16429261 YP_008353730.1 CDS CTRC966_00890 NC_021898.1 189795 190973 D COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta 189795..190973 Chlamydia trachomatis RC-J/966 16429262 YP_008353731.1 CDS CTRC966_00895 NC_021898.1 190966 191727 D COG0159 Tryptophan synthase alpha chain; tryptophan synthase alpha chain 190966..191727 Chlamydia trachomatis RC-J/966 16429263 YP_008353732.1 CDS CTRC966_00900 NC_021898.1 191918 192439 R hypothetical protein complement(191918..192439) Chlamydia trachomatis RC-J/966 16429264 YP_008353733.1 CDS CTRC966_00905 NC_021898.1 192516 192761 R hypothetical protein complement(192516..192761) Chlamydia trachomatis RC-J/966 16429265 YP_008353734.1 CDS CTRC966_00910 NC_021898.1 192746 192853 R hypothetical protein complement(192746..192853) Chlamydia trachomatis RC-J/966 16429266 YP_008353735.1 CDS CTRC966_00915 NC_021898.1 193048 194637 D COG4166 ABC-type oligopeptide transport system, periplasmic component; oligopeptide transport system binding protein 193048..194637 Chlamydia trachomatis RC-J/966 16429267 YP_008353736.1 CDS CTRC966_00920 NC_021898.1 194664 195071 R COG1495 Disulfide bond formation protein DsbB; putative disulfide oxidoreductase complement(194664..195071) Chlamydia trachomatis RC-J/966 16429268 YP_008353737.1 CDS CTRC966_00925 NC_021898.1 195068 195784 R COG1651 Protein-disulfide isomerase; disulfide bond chaperone complement(195068..195784) Chlamydia trachomatis RC-J/966 16429269 YP_008353738.1 CDS CTRC966_00930 NC_021898.1 195930 197144 D putative integral membrane protein 195930..197144 Chlamydia trachomatis RC-J/966 16429270 YP_008353739.1 CDS CTRC966_00935 NC_021898.1 197146 197658 R hypothetical protein complement(197146..197658) Chlamydia trachomatis RC-J/966 16429271 YP_008353740.1 CDS CTRC966_00940 NC_021898.1 197802 198494 R COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; ABC transporter, ATP-binding protein complement(197802..198494) Chlamydia trachomatis RC-J/966 16429272 YP_008353741.1 CDS CTRC966_00945 NC_021898.1 198802 199512 R hypothetical protein complement(198802..199512) Chlamydia trachomatis RC-J/966 16429275 YP_008353742.1 CDS CTRC966_00950 NC_021898.1 199880 200644 D COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase 199880..200644 Chlamydia trachomatis RC-J/966 16429276 YP_008353743.1 CDS pyrG NC_021898.1 200620 202239 D COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase 200620..202239 Chlamydia trachomatis RC-J/966 16429277 YP_008353744.1 CDS CTRC966_00960 NC_021898.1 202226 202672 D COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 202226..202672 Chlamydia trachomatis RC-J/966 16429278 YP_008353745.1 CDS CTRC966_00965 NC_021898.1 202789 204312 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 202789..204312 Chlamydia trachomatis RC-J/966 16429279 YP_008353746.1 CDS CTRC966_00970 NC_021898.1 204337 205107 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 204337..205107 Chlamydia trachomatis RC-J/966 16429280 YP_008353747.1 CDS CTRC966_00975 NC_021898.1 205104 205976 R COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' complement(205104..205976) Chlamydia trachomatis RC-J/966 16429281 YP_008353748.1 CDS tmk NC_021898.1 205990 206601 R COG0125 Thymidylate kinase; thymidylate kinase complement(205990..206601) Chlamydia trachomatis RC-J/966 16429282 YP_008353749.1 CDS CTRC966_00985 NC_021898.1 206603 209113 R COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A complement(206603..209113) Chlamydia trachomatis RC-J/966 16429283 YP_008353750.1 CDS gyrB NC_021898.1 209128 211542 R COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B complement(209128..211542) Chlamydia trachomatis RC-J/966 16429284 YP_008353751.1 CDS CTRC966_00995 NC_021898.1 211545 211895 R hypothetical protein complement(211545..211895) Chlamydia trachomatis RC-J/966 16429285 YP_008353752.1 CDS CTRC966_01000 NC_021898.1 212042 212737 R hypothetical protein complement(212042..212737) Chlamydia trachomatis RC-J/966 16429286 YP_008353753.1 CDS CTRC966_01005 NC_021898.1 212841 213959 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(212841..213959) Chlamydia trachomatis RC-J/966 16429287 YP_008353754.1 CDS CTRC966_01010 NC_021898.1 214086 215498 R COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); magnesium transport protein complement(214086..215498) Chlamydia trachomatis RC-J/966 16429288 YP_008353755.1 CDS CTRC966_01015 NC_021898.1 215938 217029 R putative integral membrane protein complement(215938..217029) Chlamydia trachomatis RC-J/966 16429289 YP_008353756.1 CDS CTRC966_01020 NC_021898.1 217255 217575 D hypothetical protein 217255..217575 Chlamydia trachomatis RC-J/966 16429290 YP_008353757.1 CDS CTRC966_01025 NC_021898.1 217651 218667 D COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 217651..218667 Chlamydia trachomatis RC-J/966 16429291 YP_008353758.1 CDS CTRC966_01030 NC_021898.1 218631 220187 D COG4166 ABC-type oligopeptide transport system, periplasmic component; oligopeptide transport system binding protein 218631..220187 Chlamydia trachomatis RC-J/966 16429292 YP_008353759.1 CDS CTRC966_01035 NC_021898.1 220346 221287 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide transport system membrane permease 220346..221287 Chlamydia trachomatis RC-J/966 16429293 YP_008353760.1 CDS CTRC966_01040 NC_021898.1 221319 222164 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide transport system membrane permease 221319..222164 Chlamydia trachomatis RC-J/966 16429294 YP_008353761.1 CDS CTRC966_01045 NC_021898.1 222157 222990 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide transport system ATP-binding protein 222157..222990 Chlamydia trachomatis RC-J/966 16429295 YP_008353762.1 CDS CTRC966_01050 NC_021898.1 223005 223748 D COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide transport system ATP-binding protein 223005..223748 Chlamydia trachomatis RC-J/966 16429296 YP_008353763.1 CDS CTRC966_01055 NC_021898.1 224060 224809 D hypothetical protein 224060..224809 Chlamydia trachomatis RC-J/966 16429297 YP_008353764.1 CDS CTRC966_01060 NC_021898.1 224839 226254 D COG0471 Di- and tricarboxylate transporters; sodium:sulfate symporter 224839..226254 Chlamydia trachomatis RC-J/966 16429298 YP_008353765.1 CDS CTRC966_01065 NC_021898.1 226274 227935 D COG0205 6-phosphofructokinase; diphosphate--fructose-6-phosphate 1-phosphotransferase 226274..227935 Chlamydia trachomatis RC-J/966 16429299 YP_008353766.1 CDS CTRC966_01070 NC_021898.1 227944 228792 D COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein 227944..228792 Chlamydia trachomatis RC-J/966 16429300 YP_008353767.1 CDS CTRC966_01075 NC_021898.1 228774 230420 D COG0205 6-phosphofructokinase; diphosphate--fructose-6-phosphate 1-phosphotransferase 228774..230420 Chlamydia trachomatis RC-J/966 16429301 YP_008353768.1 CDS CTRC966_01080 NC_021898.1 230666 231961 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(230666..231961) Chlamydia trachomatis RC-J/966 16429304 YP_008353769.1 CDS leuS NC_021898.1 231958 234417 R COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(231958..234417) Chlamydia trachomatis RC-J/966 16429305 YP_008353770.1 CDS CTRC966_01090 NC_021898.1 234614 235882 D COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 234614..235882 Chlamydia trachomatis RC-J/966 16429306 YP_008353771.1 CDS CTRC966_01095 NC_021898.1 235874 236443 R COG1678 Putative transcriptional regulator; hypothetical protein complement(235874..236443) Chlamydia trachomatis RC-J/966 16429307 YP_008353772.1 CDS CTRC966_01100 NC_021898.1 236463 236909 R COG1259 Uncharacterized conserved protein; hypothetical protein complement(236463..236909) Chlamydia trachomatis RC-J/966 16429308 YP_008353773.1 CDS CTRC966_01105 NC_021898.1 236899 237627 R COG0120 Ribose 5-phosphate isomerase; ribose-5-phosphate isomerase A complement(236899..237627) Chlamydia trachomatis RC-J/966 16429309 YP_008353774.1 CDS CTRC966_01110 NC_021898.1 237722 239365 R hypothetical protein complement(237722..239365) Chlamydia trachomatis RC-J/966 16429310 YP_008353775.1 CDS CTRC966_01115 NC_021898.1 239669 240715 D COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; fructose-bisphosphate aldolase 239669..240715 Chlamydia trachomatis RC-J/966 16429311 YP_008353776.1 CDS CTRC966_01120 NC_021898.1 240729 242129 D COG0531 Amino acid transporters; glutamate/gamma-aminobutyrate antiporter 240729..242129 Chlamydia trachomatis RC-J/966 16429312 YP_008353777.1 CDS CTRC966_01125 NC_021898.1 242223 242987 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; hypothetical protein 242223..242987 Chlamydia trachomatis RC-J/966 16429313 YP_008353778.1 CDS surE NC_021898.1 243118 243969 D COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 243118..243969 Chlamydia trachomatis RC-J/966 16429314 YP_008353779.1 CDS ubiA NC_021898.1 244081 244989 D COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; prenyltransferase 244081..244989 Chlamydia trachomatis RC-J/966 16429315 YP_008353780.1 CDS CTRC966_01140 NC_021898.1 244986 245564 D COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; aromatic acid decarboxylase 244986..245564 Chlamydia trachomatis RC-J/966 16429316 YP_008353781.1 CDS CTRC966_01145 NC_021898.1 245561 246457 R COG1284 Uncharacterized conserved protein; hypothetical protein complement(245561..246457) Chlamydia trachomatis RC-J/966 16429317 YP_008353782.1 CDS CTRC966_01150 NC_021898.1 246747 246887 R hypothetical protein complement(246747..246887) Chlamydia trachomatis RC-J/966 16429320 YP_008353783.1 CDS CTRC966_01155 NC_021898.1 246914 247300 R hypothetical protein complement(246914..247300) Chlamydia trachomatis RC-J/966 16429321 YP_008353784.1 CDS CTRC966_01160 NC_021898.1 247442 248248 R COG0525 Valyl-tRNA synthetase; hypothetical protein complement(247442..248248) Chlamydia trachomatis RC-J/966 16429322 YP_008353785.1 CDS CTRC966_01165 NC_021898.1 248640 249083 R hypothetical protein complement(248640..249083) Chlamydia trachomatis RC-J/966 16429323 YP_008353786.1 CDS CTRC966_01170 NC_021898.1 249191 249559 R hypothetical protein complement(249191..249559) Chlamydia trachomatis RC-J/966 16429324 YP_008353787.1 CDS CTRC966_01175 NC_021898.1 249658 250155 R hypothetical protein complement(249658..250155) Chlamydia trachomatis RC-J/966 16429325 YP_008353788.1 CDS CTRC966_01180 NC_021898.1 250302 250703 R hypothetical protein complement(250302..250703) Chlamydia trachomatis RC-J/966 16429326 YP_008353789.1 CDS CTRC966_01185 NC_021898.1 250984 251574 R hypothetical protein complement(250984..251574) Chlamydia trachomatis RC-J/966 16429327 YP_008353790.1 CDS CTRC966_01190 NC_021898.1 251724 252371 R hypothetical protein complement(251724..252371) Chlamydia trachomatis RC-J/966 16429328 YP_008353791.1 CDS CTRC966_01195 NC_021898.1 252597 253844 D COG1301 Na+/H+-dicarboxylate symporters; putative sodium:dicarboxylate symport protein 252597..253844 Chlamydia trachomatis RC-J/966 16429329 YP_008353792.1 CDS CTRC966_01200 NC_021898.1 254028 255500 D COG0733 Na+-dependent transporters of the SNF family; sodium-dependent amino acid transporter 254028..255500 Chlamydia trachomatis RC-J/966 16429330 YP_008353793.1 CDS CTRC966_01205 NC_021898.1 255670 255846 R hypothetical protein complement(255670..255846) Chlamydia trachomatis RC-J/966 16429331 YP_008353794.1 CDS CTRC966_01210 NC_021898.1 256029 256565 D inclusion membrane protein C 256029..256565 Chlamydia trachomatis RC-J/966 16429332 YP_008353795.1 CDS CTRC966_01215 NC_021898.1 256623 259409 D putative membrane transport protein 256623..259409 Chlamydia trachomatis RC-J/966 16429333 YP_008353796.1 CDS CTRC966_01220 NC_021898.1 259438 259851 D COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; Crp family transcriptional regulator 259438..259851 Chlamydia trachomatis RC-J/966 16429334 YP_008353797.1 CDS acpP NC_021898.1 259912 260145 R COG0236 Acyl carrier protein; acyl carrier protein complement(259912..260145) Chlamydia trachomatis RC-J/966 16429335 YP_008353798.1 CDS fabG NC_021898.1 260514 261260 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-(acyl-carrier-protein) reductase complement(260514..261260) Chlamydia trachomatis RC-J/966 16429336 YP_008353799.1 CDS CTRC966_01235 NC_021898.1 261257 262183 R COG0331 (acyl-carrier-protein) S-malonyltransferase; acyl-carrier-protein S-malonyltransferase complement(261257..262183) Chlamydia trachomatis RC-J/966 16429337 YP_008353800.1 CDS CTRC966_01240 NC_021898.1 262200 263183 R COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-(acyl carrier protein) synthase III complement(262200..263183) Chlamydia trachomatis RC-J/966 16429338 YP_008353801.1 CDS recR NC_021898.1 263321 263923 D COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 263321..263923 Chlamydia trachomatis RC-J/966 16429339 YP_008353802.1 CDS CTRC966_01250 NC_021898.1 264297 266675 D COG4775 Outer membrane protein/protective antigen OMA87; outer membrane protein (variable surface antigen) 264297..266675 Chlamydia trachomatis RC-J/966 16429340 YP_008353803.1 CDS CTRC966_01255 NC_021898.1 266742 267263 D COG2825 Outer membrane protein; outer membrane protein 266742..267263 Chlamydia trachomatis RC-J/966 16429341 YP_008353804.1 CDS lpxD NC_021898.1 267291 268355 D COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 267291..268355 Chlamydia trachomatis RC-J/966 16429342 YP_008353805.1 CDS CTRC966_01265 NC_021898.1 268352 269548 R hypothetical protein complement(268352..269548) Chlamydia trachomatis RC-J/966 16429343 YP_008353806.1 CDS CTRC966_01270 NC_021898.1 269770 270792 D COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; pyruvate dehydrogenase E1 component alpha subunit 269770..270792 Chlamydia trachomatis RC-J/966 16429344 YP_008353807.1 CDS CTRC966_01275 NC_021898.1 270785 271771 D COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; pyruvate dehydrogenase E1 component beta subunit 270785..271771 Chlamydia trachomatis RC-J/966 16429345 YP_008353808.1 CDS CTRC966_01280 NC_021898.1 271776 273065 D COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; branched-chain alpha-keto acid dehydrogenase subunit E2 271776..273065 Chlamydia trachomatis RC-J/966 16429346 YP_008353809.1 CDS CTRC966_01285 NC_021898.1 273092 275536 R COG0058 Glucan phosphorylase; glycogen phosphorylase complement(273092..275536) Chlamydia trachomatis RC-J/966 16429347 YP_008353810.1 CDS CTRC966_01290 NC_021898.1 275692 276042 D hypothetical protein 275692..276042 Chlamydia trachomatis RC-J/966 16429348 YP_008353811.1 CDS CTRC966_01295 NC_021898.1 276096 277466 R COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein complement(276096..277466) Chlamydia trachomatis RC-J/966 16429349 YP_008353812.1 CDS CTRC966_01300 NC_021898.1 277543 279900 R COG0706 Preprotein translocase subunit YidC; putative inner membrane protein translocase component YidC complement(277543..279900) Chlamydia trachomatis RC-J/966 16429350 YP_008353813.1 CDS CTRC966_01305 NC_021898.1 280216 281034 R COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase complement(280216..281034) Chlamydia trachomatis RC-J/966 16429351 YP_008353814.1 CDS CTRC966_01310 NC_021898.1 281285 281932 D putative lipoprotein 281285..281932 Chlamydia trachomatis RC-J/966 16429352 YP_008353815.1 CDS CTRC966_01315 NC_021898.1 281936 282706 D COG1266 Predicted metal-dependent membrane protease; inner membrane protein 281936..282706 Chlamydia trachomatis RC-J/966 16429353 YP_008353816.1 CDS CTRC966_01320 NC_021898.1 282914 283297 R COG1694 Predicted pyrophosphatase; hypothetical protein complement(282914..283297) Chlamydia trachomatis RC-J/966 16429354 YP_008353817.1 CDS CTRC966_01325 NC_021898.1 283486 284730 D COG1253 Hemolysins and related proteins containing CBS domains; putative membrane transport protein 283486..284730 Chlamydia trachomatis RC-J/966 16429355 YP_008353818.1 CDS CTRC966_01330 NC_021898.1 284720 285934 D COG1253 Hemolysins and related proteins containing CBS domains; hypothetical protein 284720..285934 Chlamydia trachomatis RC-J/966 16429356 YP_008353819.1 CDS CTRC966_01335 NC_021898.1 285938 287062 R COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; putative cysteine desulfurase complement(285938..287062) Chlamydia trachomatis RC-J/966 16429357 YP_008353820.1 CDS CTRC966_01340 NC_021898.1 287068 287814 R COG0631 Serine/threonine protein phosphatase; protein phosphatase 2C complement(287068..287814) Chlamydia trachomatis RC-J/966 16429358 YP_008353821.1 CDS CTRC966_01345 NC_021898.1 287938 288030 R hypothetical protein complement(287938..288030) Chlamydia trachomatis RC-J/966 16429359 YP_008353822.1 CDS CTRC966_01350 NC_021898.1 288133 288624 D COG5465 Uncharacterized conserved protein; hypothetical protein 288133..288624 Chlamydia trachomatis RC-J/966 16429360 YP_008353823.1 CDS CTRC966_01355 NC_021898.1 288633 289331 D COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon 288633..289331 Chlamydia trachomatis RC-J/966 16429361 YP_008353824.1 CDS CTRC966_01360 NC_021898.1 289328 290098 D COG2107 Predicted periplasmic solute-binding protein; hypothetical protein 289328..290098 Chlamydia trachomatis RC-J/966 16429362 YP_008353825.1 CDS CTRC966_01365 NC_021898.1 290091 290681 D hypothetical protein 290091..290681 Chlamydia trachomatis RC-J/966 16429363 YP_008353826.1 CDS CTRC966_01370 NC_021898.1 290702 292642 R COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC transporter, ATP-binding and membrane components complement(290702..292642) Chlamydia trachomatis RC-J/966 16429364 YP_008353827.1 CDS CTRC966_01375 NC_021898.1 292608 293582 R COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(292608..293582) Chlamydia trachomatis RC-J/966 16429365 YP_008353828.1 CDS CTRC966_01380 NC_021898.1 293715 294896 R hypothetical protein complement(293715..294896) Chlamydia trachomatis RC-J/966 16429366 YP_008353829.1 CDS CTRC966_01385 NC_021898.1 295014 295316 R COG0776 Bacterial nucleoid DNA-binding protein; integration host factor alpha-subunit complement(295014..295316) Chlamydia trachomatis RC-J/966 16429367 YP_008353830.1 CDS CTRC966_01390 NC_021898.1 295536 296315 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(295536..296315) Chlamydia trachomatis RC-J/966 16429368 YP_008353831.1 CDS murE NC_021898.1 296230 297681 R COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(296230..297681) Chlamydia trachomatis RC-J/966 16429369 YP_008353832.1 CDS CTRC966_01400 NC_021898.1 298004 299947 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein complement(298004..299947) Chlamydia trachomatis RC-J/966 16429370 YP_008353833.1 CDS CTRC966_01405 NC_021898.1 299934 300221 R hypothetical protein complement(299934..300221) Chlamydia trachomatis RC-J/966 16429371 YP_008353834.1 CDS CTRC966_01410 NC_021898.1 300221 301123 R COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltransferase complement(300221..301123) Chlamydia trachomatis RC-J/966 16429372 YP_008353835.1 CDS CTRC966_01415 NC_021898.1 301401 301967 D hypothetical protein 301401..301967 Chlamydia trachomatis RC-J/966 16429373 YP_008353836.1 CDS CTRC966_01420 NC_021898.1 301974 302393 D COG0457 FOG: TPR repeat; hypothetical protein 301974..302393 Chlamydia trachomatis RC-J/966 16429374 YP_008353837.1 CDS dnaA NC_021898.1 302635 304002 D COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein 302635..304002 Chlamydia trachomatis RC-J/966 16429375 YP_008353838.1 CDS CTRC966_01430 NC_021898.1 304054 304638 D COG1664 Integral membrane protein CcmA involved in cell shape determination; hypothetical protein 304054..304638 Chlamydia trachomatis RC-J/966 16429376 YP_008353839.1 CDS CTRC966_01435 NC_021898.1 304610 305269 R hypothetical protein complement(304610..305269) Chlamydia trachomatis RC-J/966 16429377 YP_008353840.1 CDS CTRC966_01440 NC_021898.1 305271 306782 D COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB; Na(+)-translocating NADH-quinone reductase subunit B 305271..306782 Chlamydia trachomatis RC-J/966 16429378 YP_008353841.1 CDS CTRC966_01445 NC_021898.1 306786 307736 D COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC; Na(+)-translocating NADH-quinone reductase subunit C 306786..307736 Chlamydia trachomatis RC-J/966 16429379 YP_008353842.1 CDS CTRC966_01450 NC_021898.1 307726 308367 D COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD; Na(+)-translocating NADH-quinone reductase subunit D 307726..308367 Chlamydia trachomatis RC-J/966 16429380 YP_008353843.1 CDS CTRC966_01455 NC_021898.1 308373 309107 D COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE; Na(+)-translocating NADH-quinone reductase subunit E 308373..309107 Chlamydia trachomatis RC-J/966 16429381 YP_008353844.1 CDS CTRC966_01460 NC_021898.1 309131 309484 R COG0509 Glycine cleavage system H protein (lipoate-binding); glycine cleavage system protein H complement(309131..309484) Chlamydia trachomatis RC-J/966 16429382 YP_008353845.1 CDS CTRC966_01465 NC_021898.1 309504 311576 R hypothetical protein complement(309504..311576) Chlamydia trachomatis RC-J/966 16429383 YP_008353846.1 CDS CTRC966_01470 NC_021898.1 311771 313195 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase D complement(311771..313195) Chlamydia trachomatis RC-J/966 16429384 YP_008353847.1 CDS CTRC966_01475 NC_021898.1 313201 313920 R COG0095 Lipoate-protein ligase A; lipoate-protein ligase A complement(313201..313920) Chlamydia trachomatis RC-J/966 16429385 YP_008353848.1 CDS CTRC966_01480 NC_021898.1 314185 316749 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent Clp protease 314185..316749 Chlamydia trachomatis RC-J/966 16429386 YP_008353849.1 CDS mnmA NC_021898.1 316730 317806 R COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA complement(316730..317806) Chlamydia trachomatis RC-J/966 16429387 YP_008353850.1 CDS CTRC966_01490 NC_021898.1 318038 319732 D hypothetical protein 318038..319732 Chlamydia trachomatis RC-J/966 16429388 YP_008353851.1 CDS CTRC966_01495 NC_021898.1 319819 320964 R hypothetical protein complement(319819..320964) Chlamydia trachomatis RC-J/966 16429389 YP_008353852.1 CDS CTRC966_01500 NC_021898.1 321022 321699 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS family membrane transport protein IIA subunit complement(321022..321699) Chlamydia trachomatis RC-J/966 16429390 YP_008353853.1 CDS CTRC966_01505 NC_021898.1 321702 322178 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS-family membrane transport protein IIA component complement(321702..322178) Chlamydia trachomatis RC-J/966 16429391 YP_008353854.1 CDS dut NC_021898.1 322180 322617 R COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(322180..322617) Chlamydia trachomatis RC-J/966 16429392 YP_008353855.1 CDS CTRC966_01515 NC_021898.1 322654 323580 R COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta complement(322654..323580) Chlamydia trachomatis RC-J/966 16429393 YP_008353856.1 CDS CTRC966_01520 NC_021898.1 323651 324271 R COG0605 Superoxide dismutase; superoxide dismutase complement(323651..324271) Chlamydia trachomatis RC-J/966 16429394 YP_008353857.1 CDS CTRC966_01525 NC_021898.1 324403 326184 R COG1109 Phosphomannomutase; phosphoglucomutase complement(324403..326184) Chlamydia trachomatis RC-J/966 16429395 YP_008353858.1 CDS CTRC966_01530 NC_021898.1 326336 326803 R hypothetical protein complement(326336..326803) Chlamydia trachomatis RC-J/966 16429396 YP_008353859.1 CDS rnc NC_021898.1 326912 327607 D COG0571 dsRNA-specific ribonuclease; ribonuclease III 326912..327607 Chlamydia trachomatis RC-J/966 16429397 YP_008353860.1 CDS CTRC966_01540 NC_021898.1 327591 328955 D COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 327591..328955 Chlamydia trachomatis RC-J/966 16429398 YP_008353861.1 CDS CTRC966_01545 NC_021898.1 328933 329658 D COG0181 Porphobilinogen deaminase; porphobilinogen deaminase 328933..329658 Chlamydia trachomatis RC-J/966 16429399 YP_008353862.1 CDS pknD NC_021898.1 330451 333255 R COG0515 Serine/threonine protein kinase; serine/threonine-protein kinase complement(330451..333255) Chlamydia trachomatis RC-J/966 16429400 YP_008353863.1 CDS valS NC_021898.1 333270 336089 R COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase complement(333270..336089) Chlamydia trachomatis RC-J/966 16429401 YP_008353864.1 CDS CTRC966_01560 NC_021898.1 336216 336731 R hypothetical protein complement(336216..336731) Chlamydia trachomatis RC-J/966 16429402 YP_008353865.1 CDS CTRC966_01565 NC_021898.1 336652 337077 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; V-type ATP synthase subunit K complement(336652..337077) Chlamydia trachomatis RC-J/966 16429403 YP_008353866.1 CDS CTRC966_01570 NC_021898.1 337140 339089 R COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; V-type ATP synthase subunit I complement(337140..339089) Chlamydia trachomatis RC-J/966 16429404 YP_008353867.1 CDS CTRC966_01575 NC_021898.1 339095 339706 R COG1394 Archaeal/vacuolar-type H+-ATPase subunit D; V-type ATP synthase subunit D complement(339095..339706) Chlamydia trachomatis RC-J/966 16429405 YP_008353868.1 CDS CTRC966_01580 NC_021898.1 339691 341007 R COG1156 Archaeal/vacuolar-type H+-ATPase subunit B; V-type ATP synthase subunit B complement(339691..341007) Chlamydia trachomatis RC-J/966 16429406 YP_008353869.1 CDS CTRC966_01585 NC_021898.1 341010 342785 R COG1155 Archaeal/vacuolar-type H+-ATPase subunit A; V-type ATP synthase subunit A complement(341010..342785) Chlamydia trachomatis RC-J/966 16429407 YP_008353870.1 CDS CTRC966_01590 NC_021898.1 342779 343579 R hypothetical protein complement(342779..343579) Chlamydia trachomatis RC-J/966 16429408 YP_008353871.1 CDS CTRC966_01595 NC_021898.1 343746 344372 R COG1390 Archaeal/vacuolar-type H+-ATPase subunit E; V-type ATP synthase subunit E complement(343746..344372) Chlamydia trachomatis RC-J/966 16429409 YP_008353872.1 CDS CTRC966_01600 NC_021898.1 344481 345191 D hypothetical protein 344481..345191 Chlamydia trachomatis RC-J/966 16429410 YP_008353873.1 CDS CTRC966_01605 NC_021898.1 345199 345570 R hypothetical protein complement(345199..345570) Chlamydia trachomatis RC-J/966 16429411 YP_008353874.1 CDS CTRC966_01610 NC_021898.1 345615 346598 R COG0176 Transaldolase; transaldolase B complement(345615..346598) Chlamydia trachomatis RC-J/966 16429412 YP_008353875.1 CDS CTRC966_01615 NC_021898.1 346710 350900 R COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-directed RNA polymerase subunit beta' complement(346710..350900) Chlamydia trachomatis RC-J/966 16429413 YP_008353876.1 CDS rpoB NC_021898.1 350925 354683 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta complement(350925..354683) Chlamydia trachomatis RC-J/966 16429414 YP_008353877.1 CDS rplL NC_021898.1 355044 355436 R COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(355044..355436) Chlamydia trachomatis RC-J/966 16429415 YP_008353878.1 CDS rplJ NC_021898.1 355468 355986 R COG0244 Ribosomal protein L10; 50S ribosomal protein L10 complement(355468..355986) Chlamydia trachomatis RC-J/966 16429416 YP_008353879.1 CDS rplA NC_021898.1 356008 356706 R COG0081 Ribosomal protein L1; 50S ribosomal protein L1 complement(356008..356706) Chlamydia trachomatis RC-J/966 16429417 YP_008353880.1 CDS rplK NC_021898.1 356729 357154 R COG0080 Ribosomal protein L11; 50S ribosomal protein L11 complement(356729..357154) Chlamydia trachomatis RC-J/966 16429418 YP_008353881.1 CDS nusG NC_021898.1 357260 357808 R COG0250 Transcription antiterminator; transcription antitermination protein NusG complement(357260..357808) Chlamydia trachomatis RC-J/966 16429419 YP_008353882.1 CDS secE NC_021898.1 357812 358060 R COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE complement(357812..358060) Chlamydia trachomatis RC-J/966 16429420 YP_008353883.1 CDS CTRC966_01655 NC_021898.1 358203 359387 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(358203..359387) Chlamydia trachomatis RC-J/966 16429422 YP_008353884.1 CDS infA NC_021898.1 359735 359956 R COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 complement(359735..359956) Chlamydia trachomatis RC-J/966 16429424 YP_008353885.1 CDS CTRC966_01665 NC_021898.1 360368 361279 D hypothetical protein 360368..361279 Chlamydia trachomatis RC-J/966 16429425 YP_008353886.1 CDS CTRC966_01670 NC_021898.1 361276 361722 D COG2166 SufE protein probably involved in Fe-S center assembly; hypothetical protein 361276..361722 Chlamydia trachomatis RC-J/966 16429426 YP_008353887.1 CDS CTRC966_01675 NC_021898.1 361774 363546 R hypothetical protein complement(361774..363546) Chlamydia trachomatis RC-J/966 16429427 YP_008353888.1 CDS CTRC966_01680 NC_021898.1 363563 363751 R hypothetical protein complement(363563..363751) Chlamydia trachomatis RC-J/966 16429428 YP_008353889.1 CDS CTRC966_01685 NC_021898.1 363941 364123 R hypothetical protein complement(363941..364123) Chlamydia trachomatis RC-J/966 16429429 YP_008353890.1 CDS CTRC966_01690 NC_021898.1 364843 365469 R COG0135 Phosphoribosylanthranilate isomerase; N-(5'-phosphoribosyl)anthranilate isomerase complement(364843..365469) Chlamydia trachomatis RC-J/966 16429431 YP_008353891.1 CDS tpiA NC_021898.1 365666 366490 D COG0149 Triosephosphate isomerase; triosephosphate isomerase 365666..366490 Chlamydia trachomatis RC-J/966 16429432 YP_008353892.1 CDS xseA NC_021898.1 366504 368054 D COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 366504..368054 Chlamydia trachomatis RC-J/966 16429433 YP_008353893.1 CDS CTRC966_01705 NC_021898.1 368038 368256 D COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 368038..368256 Chlamydia trachomatis RC-J/966 16429434 YP_008353894.1 CDS CTRC966_01710 NC_021898.1 368263 368535 D COG1197 Transcription-repair coupling factor (superfamily II helicase); hypothetical protein 368263..368535 Chlamydia trachomatis RC-J/966 16429435 YP_008353895.1 CDS CTRC966_01715 NC_021898.1 368532 370454 D COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 368532..370454 Chlamydia trachomatis RC-J/966 16429436 YP_008353896.1 CDS CTRC966_01720 NC_021898.1 370551 372008 D COG0469 Pyruvate kinase; pyruvate kinase 370551..372008 Chlamydia trachomatis RC-J/966 16429437 YP_008353897.1 CDS CTRC966_01725 NC_021898.1 372031 377391 D COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A 372031..377391 Chlamydia trachomatis RC-J/966 16429438 YP_008353898.1 CDS CTRC966_01730 NC_021898.1 377609 379009 D COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau 377609..379009 Chlamydia trachomatis RC-J/966 16429439 YP_008353899.1 CDS CTRC966_01735 NC_021898.1 379002 379292 D COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 379002..379292 Chlamydia trachomatis RC-J/966 16429440 YP_008353900.1 CDS CTRC966_01740 NC_021898.1 379302 381017 R COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); phosphoenolpyruvate-protein phosphotransferase complement(379302..381017) Chlamydia trachomatis RC-J/966 16429441 YP_008353901.1 CDS CTRC966_01745 NC_021898.1 381017 381346 R COG1925 Phosphotransferase system, HPr-related proteins; phosphocarrier protein HPr complement(381017..381346) Chlamydia trachomatis RC-J/966 16429442 YP_008353902.1 CDS CTRC966_01750 NC_021898.1 381484 381945 R hypothetical protein complement(381484..381945) Chlamydia trachomatis RC-J/966 16429443 YP_008353903.1 CDS CTRC966_01755 NC_021898.1 382002 382256 R putative cytoplasmic protein complement(382002..382256) Chlamydia trachomatis RC-J/966 16429444 YP_008353904.1 CDS CTRC966_01760 NC_021898.1 382229 383758 D COG0658 Predicted membrane metal-binding protein; hypothetical protein 382229..383758 Chlamydia trachomatis RC-J/966 16429445 YP_008353905.1 CDS CTRC966_01765 NC_021898.1 383830 385866 R COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; 2-oxoisovalerate dehydrogenase alpha subunit complement(383830..385866) Chlamydia trachomatis RC-J/966 16429446 YP_008353906.1 CDS CTRC966_01770 NC_021898.1 385901 387079 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(385901..387079) Chlamydia trachomatis RC-J/966 16429447 YP_008353907.1 CDS rpsU NC_021898.1 387108 387284 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(387108..387284) Chlamydia trachomatis RC-J/966 16429448 YP_008353908.1 CDS CTRC966_01780 NC_021898.1 387482 388114 R COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; O-sialoglycoprotein endopeptidase complement(387482..388114) Chlamydia trachomatis RC-J/966 16429449 YP_008353909.1 CDS CTRC966_01785 NC_021898.1 388424 390883 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 388424..390883 Chlamydia trachomatis RC-J/966 16429450 YP_008353910.1 CDS CTRC966_01790 NC_021898.1 390985 391350 D hypothetical protein 390985..391350 Chlamydia trachomatis RC-J/966 16429451 YP_008353911.1 CDS CTRC966_01795 NC_021898.1 391444 391590 R hypothetical protein complement(391444..391590) Chlamydia trachomatis RC-J/966 16429452 YP_008353912.1 CDS CTRC966_01800 NC_021898.1 391693 392607 D COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; ribonuclease Z 391693..392607 Chlamydia trachomatis RC-J/966 16429453 YP_008353913.1 CDS xerC NC_021898.1 392669 393616 D COG0582 Integrase; site-specific tyrosine recombinase XerC 392669..393616 Chlamydia trachomatis RC-J/966 16429454 YP_008353914.1 CDS CTRC966_01810 NC_021898.1 393670 395259 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter, ATP-binding component 393670..395259 Chlamydia trachomatis RC-J/966 16429455 YP_008353915.1 CDS CTRC966_01815 NC_021898.1 395295 395885 D COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 395295..395885 Chlamydia trachomatis RC-J/966 16429456 YP_008353916.1 CDS CTRC966_01820 NC_021898.1 395867 397567 D COG1413 FOG: HEAT repeat; putative lipoprotein 395867..397567 Chlamydia trachomatis RC-J/966 16429457 YP_008353917.1 CDS CTRC966_01825 NC_021898.1 397574 399676 D hypothetical protein 397574..399676 Chlamydia trachomatis RC-J/966 16429458 YP_008353918.1 CDS secG NC_021898.1 399750 400058 R preprotein translocase subunit SecG complement(399750..400058) Chlamydia trachomatis RC-J/966 16429459 YP_008353919.1 CDS def NC_021898.1 400214 400759 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(400214..400759) Chlamydia trachomatis RC-J/966 16429460 YP_008353920.1 CDS ksgA NC_021898.1 401034 401867 R COG0030 Dimethyladenosine transferase (rRNA methylation); 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein complement(401034..401867) Chlamydia trachomatis RC-J/966 16429461 YP_008353921.1 CDS CTRC966_01845 NC_021898.1 401883 402944 R hypothetical protein complement(401883..402944) Chlamydia trachomatis RC-J/966 16429462 YP_008353922.1 CDS CTRC966_01850 NC_021898.1 403249 405363 R COG1331 Highly conserved protein containing a thioredoxin domain; hypothetical protein complement(403249..405363) Chlamydia trachomatis RC-J/966 16429463 YP_008353923.1 CDS CTRC966_01860 NC_021898.1 405681 405935 R putative cytoplasmic protein complement(405681..405935) Chlamydia trachomatis RC-J/966 16429465 YP_008353924.1 CDS CTRC966_01865 NC_021898.1 405934 406152 D putative inclusion membrane protein 405934..406152 Chlamydia trachomatis RC-J/966 16429466 YP_008353925.1 CDS CTRC966_01870 NC_021898.1 406178 406690 D putative inner membrane protein 406178..406690 Chlamydia trachomatis RC-J/966 16429467 YP_008353926.1 CDS CTRC966_01875 NC_021898.1 406772 407362 R COG1268 Uncharacterized conserved protein; putative inner membrane protein complement(406772..407362) Chlamydia trachomatis RC-J/966 16429468 YP_008353927.1 CDS CTRC966_01880 NC_021898.1 407417 407671 R hypothetical protein complement(407417..407671) Chlamydia trachomatis RC-J/966 16429469 YP_008353928.1 CDS CTRC966_01885 NC_021898.1 407614 408240 R hypothetical protein complement(407614..408240) Chlamydia trachomatis RC-J/966 16429470 YP_008353929.1 CDS CTRC966_01890 NC_021898.1 408402 409262 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase complement(408402..409262) Chlamydia trachomatis RC-J/966 16429471 YP_008353930.1 CDS CTRC966_01895 NC_021898.1 409272 410567 R COG0527 Aspartokinases; aspartate kinase complement(409272..410567) Chlamydia trachomatis RC-J/966 16429472 YP_008353931.1 CDS CTRC966_01900 NC_021898.1 410560 411564 R COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(410560..411564) Chlamydia trachomatis RC-J/966 16429473 YP_008353932.1 CDS CTRC966_01905 NC_021898.1 411574 412335 R COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(411574..412335) Chlamydia trachomatis RC-J/966 16429474 YP_008353933.1 CDS CTRC966_01910 NC_021898.1 412512 414239 R putative integral membrane protein complement(412512..414239) Chlamydia trachomatis RC-J/966 16429475 YP_008353934.1 CDS CTRC966_01915 NC_021898.1 414409 415731 D COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 414409..415731 Chlamydia trachomatis RC-J/966 16429476 YP_008353935.1 CDS CTRC966_01920 NC_021898.1 415673 416227 D COG0703 Shikimate kinase; shikimate kinase 415673..416227 Chlamydia trachomatis RC-J/966 16429477 YP_008353936.1 CDS CTRC966_01925 NC_021898.1 416220 417293 D COG0082 Chorismate synthase; chorismate synthase 416220..417293 Chlamydia trachomatis RC-J/966 16429478 YP_008353937.1 CDS aroB NC_021898.1 417290 418411 D COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 417290..418411 Chlamydia trachomatis RC-J/966 16429479 YP_008353938.1 CDS aroDE NC_021898.1 418392 419834 D COG0710 3-dehydroquinate dehydratase; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein 418392..419834 Chlamydia trachomatis RC-J/966 16429480 YP_008353939.1 CDS CTRC966_01940 NC_021898.1 419876 420661 D hypothetical protein 419876..420661 Chlamydia trachomatis RC-J/966 16429481 YP_008353940.1 CDS CTRC966_01945 NC_021898.1 420802 422130 D hypothetical protein 420802..422130 Chlamydia trachomatis RC-J/966 16429482 YP_008353941.1 CDS CTRC966_01950 NC_021898.1 422199 422582 D COG1945 Uncharacterized conserved protein; hypothetical protein 422199..422582 Chlamydia trachomatis RC-J/966 16429483 YP_008353942.1 CDS CTRC966_01955 NC_021898.1 422802 424253 D COG0531 Amino acid transporters; arginine/ornithine antiporter 422802..424253 Chlamydia trachomatis RC-J/966 16429484 YP_008353943.1 CDS CTRC966_01960 NC_021898.1 424425 425483 D COG0665 Glycine/D-amino acid oxidases (deaminating); putative oxidoreductase 424425..425483 Chlamydia trachomatis RC-J/966 16429485 YP_008353944.1 CDS CTRC966_01965 NC_021898.1 425525 426505 R COG0039 Malate/lactate dehydrogenases; malate dehydrogenase complement(425525..426505) Chlamydia trachomatis RC-J/966 16429486 YP_008353945.1 CDS CTRC966_01970 NC_021898.1 426695 426835 R late transcription unit A protein complement(426695..426835) Chlamydia trachomatis RC-J/966 16429487 YP_008353946.1 CDS pgi NC_021898.1 426950 428527 R COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase complement(426950..428527) Chlamydia trachomatis RC-J/966 16429488 YP_008353947.1 CDS CTRC966_01980 NC_021898.1 428640 429983 R COG2262 GTPases; putative nucleotide-binding protein complement(428640..429983) Chlamydia trachomatis RC-J/966 16429489 YP_008353948.1 CDS CTRC966_01985 NC_021898.1 429996 430796 R COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; metal-dependent hydrolase complement(429996..430796) Chlamydia trachomatis RC-J/966 16429490 YP_008353949.1 CDS CTRC966_01990 NC_021898.1 430825 431598 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; arginine transport substrate-binding protein complement(430825..431598) Chlamydia trachomatis RC-J/966 16429491 YP_008353950.1 CDS CTRC966_01995 NC_021898.1 431667 432503 R COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; 3-deoxy-7-phosphoheptulonate synthase complement(431667..432503) Chlamydia trachomatis RC-J/966 16429492 YP_008353951.1 CDS CTRC966_02000 NC_021898.1 433014 433745 D hypothetical protein 433014..433745 Chlamydia trachomatis RC-J/966 16429493 YP_008353952.1 CDS CTRC966_02005 NC_021898.1 433756 435375 R COG1413 FOG: HEAT repeat; hypothetical protein complement(433756..435375) Chlamydia trachomatis RC-J/966 16429494 YP_008353953.1 CDS CTRC966_02010 NC_021898.1 435390 435725 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; hypothetical protein complement(435390..435725) Chlamydia trachomatis RC-J/966 16429495 YP_008353954.1 CDS CTRC966_02015 NC_021898.1 435722 436591 R COG4286 Uncharacterized conserved protein related to MYG1 family; MYG1 protein complement(435722..436591) Chlamydia trachomatis RC-J/966 16429496 YP_008353955.1 CDS CTRC966_02020 NC_021898.1 436878 438953 D COG1611 Predicted Rossmann fold nucleotide-binding protein; hypothetical protein 436878..438953 Chlamydia trachomatis RC-J/966 16429497 YP_008353956.1 CDS CTRC966_02025 NC_021898.1 438967 439314 R COG1872 Uncharacterized conserved protein; hypothetical protein complement(438967..439314) Chlamydia trachomatis RC-J/966 16429498 YP_008353957.1 CDS CTRC966_02030 NC_021898.1 439496 440722 D hypothetical protein 439496..440722 Chlamydia trachomatis RC-J/966 16429499 YP_008353958.1 CDS CTRC966_02035 NC_021898.1 440830 442014 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; L,L-diaminopimelate aminotransferase 440830..442014 Chlamydia trachomatis RC-J/966 16429500 YP_008353959.1 CDS CTRC966_02040 NC_021898.1 442022 443029 D COG2984 ABC-type uncharacterized transport system, periplasmic component; ABC transporter substrate-binding component 442022..443029 Chlamydia trachomatis RC-J/966 16429501 YP_008353960.1 CDS CTRC966_02045 NC_021898.1 443038 444168 R hypothetical protein complement(443038..444168) Chlamydia trachomatis RC-J/966 16429502 YP_008353961.1 CDS CTRC966_02050 NC_021898.1 444369 446114 D COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase 444369..446114 Chlamydia trachomatis RC-J/966 16429503 YP_008353962.1 CDS hrcA NC_021898.1 446201 447361 D COG1420 Transcriptional regulator of heat shock gene; heat-inducible transcription repressor 446201..447361 Chlamydia trachomatis RC-J/966 16429504 YP_008353963.1 CDS CTRC966_02060 NC_021898.1 447358 447930 D COG0576 Molecular chaperone GrpE (heat shock protein); HSP-70 cofactor 447358..447930 Chlamydia trachomatis RC-J/966 16429505 YP_008353964.1 CDS dnaK NC_021898.1 447956 449938 D COG0443 Molecular chaperone; molecular chaperone DnaK 447956..449938 Chlamydia trachomatis RC-J/966 16429506 YP_008353965.1 CDS CTRC966_02070 NC_021898.1 450231 452315 D COG0557 Exoribonuclease R; exoribonuclease II 450231..452315 Chlamydia trachomatis RC-J/966 16429507 YP_008353966.1 CDS CTRC966_02075 NC_021898.1 452571 453335 D COG1579 Zn-ribbon protein, possibly nucleic acid-binding; hypothetical protein 452571..453335 Chlamydia trachomatis RC-J/966 16429508 YP_008353967.1 CDS CTRC966_02080 NC_021898.1 453758 454744 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; carbohydrate isomerase complement(453758..454744) Chlamydia trachomatis RC-J/966 16429509 YP_008353968.1 CDS CTRC966_02085 NC_021898.1 454776 455942 R COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(454776..455942) Chlamydia trachomatis RC-J/966 16429510 YP_008353969.1 CDS CTRC966_02090 NC_021898.1 455941 456042 D hypothetical protein 455941..456042 Chlamydia trachomatis RC-J/966 16429511 YP_008353970.1 CDS CTRC966_02095 NC_021898.1 456188 457426 R COG1301 Na+/H+-dicarboxylate symporters; Sodium:dicarboxylate symport protein complement(456188..457426) Chlamydia trachomatis RC-J/966 16429512 YP_008353971.1 CDS lpxK NC_021898.1 457423 458532 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(457423..458532) Chlamydia trachomatis RC-J/966 16429513 YP_008353972.1 CDS CTRC966_02105 NC_021898.1 458698 459507 R COG0566 rRNA methylases; 23S rRNA methyltransferase complement(458698..459507) Chlamydia trachomatis RC-J/966 16429514 YP_008353973.1 CDS CTRC966_02110 NC_021898.1 459495 460322 R COG1092 Predicted SAM-dependent methyltransferases; N6-adenine-specific DNA methylase complement(459495..460322) Chlamydia trachomatis RC-J/966 16429515 YP_008353974.1 CDS CTRC966_02115 NC_021898.1 460319 460918 R COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha complement(460319..460918) Chlamydia trachomatis RC-J/966 16429516 YP_008353975.1 CDS nrdR NC_021898.1 461311 461775 D COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains; transcriptional regulator NrdR 461311..461775 Chlamydia trachomatis RC-J/966 16429517 YP_008353976.1 CDS CTRC966_02125 NC_021898.1 461789 462163 D COG1734 DnaK suppressor protein; dnaK suppressor protein 461789..462163 Chlamydia trachomatis RC-J/966 16429518 YP_008353977.1 CDS lspA NC_021898.1 462169 462672 D COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase 462169..462672 Chlamydia trachomatis RC-J/966 16429519 YP_008353978.1 CDS CTRC966_02135 NC_021898.1 462774 464135 D COG1115 Na+/alanine symporter; Sodium/alanine symporter protein 462774..464135 Chlamydia trachomatis RC-J/966 16429520 YP_008353979.1 CDS CTRC966_02140 NC_021898.1 464351 465628 D COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; polyA polymerase 464351..465628 Chlamydia trachomatis RC-J/966 16429521 YP_008353980.1 CDS lpxB NC_021898.1 465689 467512 D COG3952 Predicted membrane protein; lipid-A-disaccharide synthase 465689..467512 Chlamydia trachomatis RC-J/966 16429522 YP_008353981.1 CDS CTRC966_02150 NC_021898.1 467619 470546 D polymorphic outer membrane protein 467619..470546 Chlamydia trachomatis RC-J/966 16429523 YP_008353982.1 CDS CTRC966_02155 NC_021898.1 470685 475934 D polymorphic outer membrane protein 470685..475934 Chlamydia trachomatis RC-J/966 16429524 YP_008353983.1 CDS CTRC966_02160 NC_021898.1 476109 481433 D polymorphic outer membrane protein 476109..481433 Chlamydia trachomatis RC-J/966 16429525 YP_008353984.1 CDS CTRC966_02165 NC_021898.1 481986 482816 D COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; metal transporter, metal-binding component 481986..482816 Chlamydia trachomatis RC-J/966 16429527 YP_008353985.1 CDS CTRC966_02170 NC_021898.1 482813 483523 D COG1121 ABC-type Mn/Zn transport systems, ATPase component; metal transport system ATP-binding protein 482813..483523 Chlamydia trachomatis RC-J/966 16429528 YP_008353986.1 CDS CTRC966_02175 NC_021898.1 483514 484395 D COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; metal transporter, membrane permease component 483514..484395 Chlamydia trachomatis RC-J/966 16429529 YP_008353987.1 CDS obgE NC_021898.1 484311 485318 R COG0536 Predicted GTPase; GTPase CgtA complement(484311..485318) Chlamydia trachomatis RC-J/966 16429530 YP_008353988.1 CDS rpmA NC_021898.1 485408 485659 R COG0211 Ribosomal protein L27; 50S ribosomal protein L27 complement(485408..485659) Chlamydia trachomatis RC-J/966 16429531 YP_008353989.1 CDS rplU NC_021898.1 485690 486013 R COG0261 Ribosomal protein L21; 50S ribosomal protein L21 complement(485690..486013) Chlamydia trachomatis RC-J/966 16429532 YP_008353990.1 CDS CTRC966_02195 NC_021898.1 486563 487264 D COG2928 Uncharacterized conserved protein; putative inner membrane protein 486563..487264 Chlamydia trachomatis RC-J/966 16429534 YP_008353991.1 CDS CTRC966_02200 NC_021898.1 487449 487610 D hypothetical protein 487449..487610 Chlamydia trachomatis RC-J/966 16429535 YP_008353992.1 CDS CTRC966_02205 NC_021898.1 487627 487788 D hypothetical protein 487627..487788 Chlamydia trachomatis RC-J/966 16429536 YP_008353993.1 CDS CTRC966_02210 NC_021898.1 487801 488286 D COG0319 Predicted metal-dependent hydrolase; hypothetical protein 487801..488286 Chlamydia trachomatis RC-J/966 16429537 YP_008353994.1 CDS CTRC966_02215 NC_021898.1 488419 489528 D COG1253 Hemolysins and related proteins containing CBS domains; putative cation efflux protein 488419..489528 Chlamydia trachomatis RC-J/966 16429538 YP_008353995.1 CDS CTRC966_02220 NC_021898.1 489717 490067 D COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); anti-sigma F factor antagonist 489717..490067 Chlamydia trachomatis RC-J/966 16429539 YP_008353996.1 CDS CTRC966_02225 NC_021898.1 490245 492110 D hypothetical protein 490245..492110 Chlamydia trachomatis RC-J/966 16429540 YP_008353997.1 CDS CTRC966_02230 NC_021898.1 492307 493416 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 492307..493416 Chlamydia trachomatis RC-J/966 16429541 YP_008353998.1 CDS CTRC966_02235 NC_021898.1 493389 494210 D COG1427 Predicted periplasmic solute-binding protein; hypothetical protein 493389..494210 Chlamydia trachomatis RC-J/966 16429542 YP_008353999.1 CDS ubiE NC_021898.1 494146 494835 D COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase 494146..494835 Chlamydia trachomatis RC-J/966 16429543 YP_008354000.1 CDS CTRC966_02245 NC_021898.1 494861 495850 R hypothetical protein complement(494861..495850) Chlamydia trachomatis RC-J/966 16429544 YP_008354001.1 CDS dapF NC_021898.1 495911 496738 R COG0253 Diaminopimelate epimerase; diaminopimelate epimerase complement(495911..496738) Chlamydia trachomatis RC-J/966 16429545 YP_008354002.1 CDS CTRC966_02255 NC_021898.1 496707 497285 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(496707..497285) Chlamydia trachomatis RC-J/966 16429546 YP_008354003.1 CDS CTRC966_02260 NC_021898.1 497297 498790 R COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase complement(497297..498790) Chlamydia trachomatis RC-J/966 16429547 YP_008354004.1 CDS CTRC966_02265 NC_021898.1 499041 499148 R hypothetical protein complement(499041..499148) Chlamydia trachomatis RC-J/966 16429548 YP_008354005.1 CDS hemD NC_021898.1 499154 499825 D uroporphyrinogen-III synthase 499154..499825 Chlamydia trachomatis RC-J/966 16429549 YP_008354006.1 CDS ispF NC_021898.1 499928 500464 D COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 499928..500464 Chlamydia trachomatis RC-J/966 16429550 YP_008354007.1 CDS CTRC966_02280 NC_021898.1 500461 501513 R COG0369 Sulfite reductase, alpha subunit (flavoprotein); putative oxidoreductase complement(500461..501513) Chlamydia trachomatis RC-J/966 16429551 YP_008354008.1 CDS rpsJ NC_021898.1 501530 501847 R COG0051 Ribosomal protein S10; 30S ribosomal protein S10 complement(501530..501847) Chlamydia trachomatis RC-J/966 16429552 YP_008354009.1 CDS CTRC966_02290 NC_021898.1 501855 503939 R COG0480 Translation elongation factors (GTPases); elongation factor G complement(501855..503939) Chlamydia trachomatis RC-J/966 16429553 YP_008354010.1 CDS CTRC966_02295 NC_021898.1 503981 504454 R COG0049 Ribosomal protein S7; 30S ribosomal protein S7 complement(503981..504454) Chlamydia trachomatis RC-J/966 16429554 YP_008354011.1 CDS rpsL NC_021898.1 504504 504875 R COG0048 Ribosomal protein S12; 30S ribosomal protein S12 complement(504504..504875) Chlamydia trachomatis RC-J/966 16429555 YP_008354012.1 CDS CTRC966_02305 NC_021898.1 505135 505473 D hypothetical protein 505135..505473 Chlamydia trachomatis RC-J/966 16429556 YP_008354013.1 CDS CTRC966_02310 NC_021898.1 505631 507580 D COG0793 Periplasmic protease; carboxy-terminal processing protease 505631..507580 Chlamydia trachomatis RC-J/966 16429557 YP_008354014.1 CDS CTRC966_02315 NC_021898.1 507687 508139 R cysteine-rich membrane protein complement(507687..508139) Chlamydia trachomatis RC-J/966 16429558 YP_008354015.1 CDS CTRC966_02320 NC_021898.1 508317 509978 R 60kD cysteine-rich outer membrane protein complement(508317..509978) Chlamydia trachomatis RC-J/966 16429559 YP_008354016.1 CDS CTRC966_02325 NC_021898.1 510125 510391 R cysteine-rich outer membrane protein complement(510125..510391) Chlamydia trachomatis RC-J/966 16429560 YP_008354017.1 CDS CTRC966_02330 NC_021898.1 510728 510952 D putative lipoprotein 510728..510952 Chlamydia trachomatis RC-J/966 16429561 YP_008354018.1 CDS gltX NC_021898.1 510949 512469 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase complement(510949..512469) Chlamydia trachomatis RC-J/966 16429562 YP_008354019.1 CDS CTRC966_02340 NC_021898.1 512740 513291 R COG0005 Purine nucleoside phosphorylase; hypothetical protein complement(512740..513291) Chlamydia trachomatis RC-J/966 16429563 YP_008354020.1 CDS CTRC966_02345 NC_021898.1 513695 515449 R COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease complement(513695..515449) Chlamydia trachomatis RC-J/966 16429564 YP_008354021.1 CDS CTRC966_02350 NC_021898.1 515474 515566 R hypothetical protein complement(515474..515566) Chlamydia trachomatis RC-J/966 16429565 YP_008354022.1 CDS CTRC966_02355 NC_021898.1 515567 519769 R COG0342 Preprotein translocase subunit SecD; bifunctional preprotein translocase subunit SecD/SecF complement(515567..519769) Chlamydia trachomatis RC-J/966 16429566 YP_008354023.1 CDS CTRC966_02360 NC_021898.1 520189 520521 R hypothetical protein complement(520189..520521) Chlamydia trachomatis RC-J/966 16429567 YP_008354024.1 CDS CTRC966_02365 NC_021898.1 520983 521744 D COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase 520983..521744 Chlamydia trachomatis RC-J/966 16429568 YP_008354025.1 CDS CTRC966_02370 NC_021898.1 521648 521812 R hypothetical protein complement(521648..521812) Chlamydia trachomatis RC-J/966 16429569 YP_008354026.1 CDS CTRC966_02375 NC_021898.1 521750 522667 D COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 521750..522667 Chlamydia trachomatis RC-J/966 16429570 YP_008354027.1 CDS cmk NC_021898.1 522664 523314 D COG0283 Cytidylate kinase; cytidylate kinase 522664..523314 Chlamydia trachomatis RC-J/966 16429571 YP_008354028.1 CDS CTRC966_02385 NC_021898.1 523311 523961 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 523311..523961 Chlamydia trachomatis RC-J/966 16429572 YP_008354029.1 CDS argS NC_021898.1 523976 525667 D COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase 523976..525667 Chlamydia trachomatis RC-J/966 16429573 YP_008354030.1 CDS CTRC966_02395 NC_021898.1 525705 527039 R COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(525705..527039) Chlamydia trachomatis RC-J/966 16429574 YP_008354031.1 CDS CTRC966_02400 NC_021898.1 527252 530269 D translocated actin-recruiting phosphoprotein 527252..530269 Chlamydia trachomatis RC-J/966 16429575 YP_008354032.1 CDS CTRC966_02405 NC_021898.1 530321 531037 R COG0217 Uncharacterized conserved protein; hypothetical protein complement(530321..531037) Chlamydia trachomatis RC-J/966 16429576 YP_008354033.1 CDS CTRC966_02410 NC_021898.1 531220 531723 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; ribosomal-protein-alanine acetyltransferase complement(531220..531723) Chlamydia trachomatis RC-J/966 16429577 YP_008354034.1 CDS prfB NC_021898.1 531720 532724 R COG1186 Protein chain release factor B; peptide chain release factor 2 complement(531720..532724) Chlamydia trachomatis RC-J/966 16429578 YP_008354035.1 CDS CTRC966_02420 NC_021898.1 533147 533407 D COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling; hypothetical protein 533147..533407 Chlamydia trachomatis RC-J/966 16429579 YP_008354036.1 CDS CTRC966_02425 NC_021898.1 533465 534454 D COG1408 Predicted phosphohydrolases; putative metallo-phosphoesterase 533465..534454 Chlamydia trachomatis RC-J/966 16429580 YP_008354037.1 CDS ispD NC_021898.1 534444 535103 D COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 534444..535103 Chlamydia trachomatis RC-J/966 16429581 YP_008354038.1 CDS truA NC_021898.1 535112 535915 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 535112..535915 Chlamydia trachomatis RC-J/966 16429582 YP_008354039.1 CDS CTRC966_02440 NC_021898.1 535867 536541 R COG0637 Predicted phosphatase/phosphohexomutase; HAD superfamily hydrolase complement(535867..536541) Chlamydia trachomatis RC-J/966 16429583 YP_008354040.1 CDS CTRC966_02445 NC_021898.1 536634 537275 D hypothetical protein 536634..537275 Chlamydia trachomatis RC-J/966 16429584 YP_008354041.1 CDS CTRC966_02450 NC_021898.1 537569 537898 D hypothetical protein 537569..537898 Chlamydia trachomatis RC-J/966 16429586 YP_008354042.1 CDS CTRC966_02455 NC_021898.1 537876 538934 D COG0642 Signal transduction histidine kinase; two component regulator, histidine kinase 537876..538934 Chlamydia trachomatis RC-J/966 16429587 YP_008354043.1 CDS CTRC966_02460 NC_021898.1 538977 540137 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; two component system response regulator 538977..540137 Chlamydia trachomatis RC-J/966 16429588 YP_008354044.1 CDS CTRC966_02465 NC_021898.1 540364 540900 D hypothetical protein 540364..540900 Chlamydia trachomatis RC-J/966 16429590 YP_008354045.1 CDS recO NC_021898.1 540870 541601 D COG1381 Recombinational DNA repair protein (RecF pathway); DNA repair protein RecO 540870..541601 Chlamydia trachomatis RC-J/966 16429591 YP_008354046.1 CDS CTRC966_02475 NC_021898.1 541598 542200 R hypothetical protein complement(541598..542200) Chlamydia trachomatis RC-J/966 16429592 YP_008354047.1 CDS CTRC966_02485 NC_021898.1 542678 543472 D COG1723 Uncharacterized conserved protein; hypothetical protein 542678..543472 Chlamydia trachomatis RC-J/966 16429594 YP_008354048.1 CDS CTRC966_02490 NC_021898.1 543478 543792 D COG0759 Uncharacterized conserved protein; hypothetical protein 543478..543792 Chlamydia trachomatis RC-J/966 16429595 YP_008354049.1 CDS CTRC966_02495 NC_021898.1 543731 544660 R hypothetical protein complement(543731..544660) Chlamydia trachomatis RC-J/966 16429596 YP_008354050.1 CDS pheT NC_021898.1 544748 547120 D COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 544748..547120 Chlamydia trachomatis RC-J/966 16429597 YP_008354051.1 CDS CTRC966_02505 NC_021898.1 547117 548082 D COG2849 Uncharacterized protein conserved in bacteria; hypothetical protein 547117..548082 Chlamydia trachomatis RC-J/966 16429598 YP_008354052.1 CDS CTRC966_02510 NC_021898.1 548101 548613 D COG0350 Methylated DNA-protein cysteine methyltransferase; putative DNA methyltransferase 548101..548613 Chlamydia trachomatis RC-J/966 16429599 YP_008354053.1 CDS CTRC966_02515 NC_021898.1 548610 550346 R COG4239 ABC-type uncharacterized transport system, permease component; oligonucleotide transport system permease complement(548610..550346) Chlamydia trachomatis RC-J/966 16429600 YP_008354054.1 CDS CTRC966_02520 NC_021898.1 550348 551826 R COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; hypothetical protein complement(550348..551826) Chlamydia trachomatis RC-J/966 16429601 YP_008354055.1 CDS CTRC966_02525 NC_021898.1 551808 553898 R COG4166 ABC-type oligopeptide transport system, periplasmic component; oligopeptide transport system, binding protein complement(551808..553898) Chlamydia trachomatis RC-J/966 16429602 YP_008354056.1 CDS CTRC966_02530 NC_021898.1 554149 554310 R hypothetical protein complement(554149..554310) Chlamydia trachomatis RC-J/966 16429603 YP_008354057.1 CDS CTRC966_02535 NC_021898.1 554504 555235 R COG0726 Predicted xylanase/chitin deacetylase; hypothetical protein complement(554504..555235) Chlamydia trachomatis RC-J/966 16429604 YP_008354058.1 CDS CTRC966_02540 NC_021898.1 555220 555381 R hypothetical protein complement(555220..555381) Chlamydia trachomatis RC-J/966 16429605 YP_008354059.1 CDS CTRC966_02545 NC_021898.1 555397 556050 R hypothetical protein complement(555397..556050) Chlamydia trachomatis RC-J/966 16429606 YP_008354060.1 CDS CTRC966_02550 NC_021898.1 556287 556409 D hypothetical protein 556287..556409 Chlamydia trachomatis RC-J/966 16429607 YP_008354061.1 CDS CTRC966_02555 NC_021898.1 556518 556883 D hypothetical protein 556518..556883 Chlamydia trachomatis RC-J/966 16429608 YP_008354062.1 CDS CTRC966_02560 NC_021898.1 556862 557860 R COG0457 FOG: TPR repeat; hypothetical protein complement(556862..557860) Chlamydia trachomatis RC-J/966 16429609 YP_008354063.1 CDS hemH NC_021898.1 558017 558961 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(558017..558961) Chlamydia trachomatis RC-J/966 16429610 YP_008354064.1 CDS CTRC966_02570 NC_021898.1 558983 559768 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine-binding protein complement(558983..559768) Chlamydia trachomatis RC-J/966 16429611 YP_008354065.1 CDS CTRC966_02575 NC_021898.1 559814 560386 R COG0742 N6-adenine-specific methylase; methyltransferase complement(559814..560386) Chlamydia trachomatis RC-J/966 16429612 YP_008354066.1 CDS CTRC966_02580 NC_021898.1 560383 561117 R COG1768 Predicted phosphohydrolase; putative phosphohydrolase complement(560383..561117) Chlamydia trachomatis RC-J/966 16429613 YP_008354067.1 CDS CTRC966_02585 NC_021898.1 561206 562531 R COG0448 ADP-glucose pyrophosphorylase; glucose-1-phosphate adenylyltransferase complement(561206..562531) Chlamydia trachomatis RC-J/966 16429614 YP_008354068.1 CDS CTRC966_02590 NC_021898.1 562723 562974 D hypothetical protein 562723..562974 Chlamydia trachomatis RC-J/966 16429615 YP_008354069.1 CDS rho NC_021898.1 562984 564378 R COG1158 Transcription termination factor; transcription termination factor Rho complement(562984..564378) Chlamydia trachomatis RC-J/966 16429616 YP_008354070.1 CDS coaE NC_021898.1 564375 564983 R COG0237 Dephospho-CoA kinase; dephospho-CoA kinase complement(564375..564983) Chlamydia trachomatis RC-J/966 16429617 YP_008354071.1 CDS CTRC966_02605 NC_021898.1 564977 567577 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I complement(564977..567577) Chlamydia trachomatis RC-J/966 16429618 YP_008354072.1 CDS CTRC966_02610 NC_021898.1 567594 568589 R COG0616 Periplasmic serine proteases (ClpP class); exported protease IV complement(567594..568589) Chlamydia trachomatis RC-J/966 16429619 YP_008354073.1 CDS CTRC966_02615 NC_021898.1 568729 570351 R COG3202 ATP/ADP translocase; putative nucleotide transport protein complement(568729..570351) Chlamydia trachomatis RC-J/966 16429620 YP_008354074.1 CDS CTRC966_02620 NC_021898.1 570563 571069 R COG0558 Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(570563..571069) Chlamydia trachomatis RC-J/966 16429621 YP_008354075.1 CDS CTRC966_02625 NC_021898.1 571465 571614 R hypothetical protein complement(571465..571614) Chlamydia trachomatis RC-J/966 16429623 YP_008354076.1 CDS CTRC966_02630 NC_021898.1 571583 573001 D COG0305 Replicative DNA helicase; replicative DNA helicase 571583..573001 Chlamydia trachomatis RC-J/966 16429624 YP_008354077.1 CDS CTRC966_02635 NC_021898.1 573296 575128 D COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 573296..575128 Chlamydia trachomatis RC-J/966 16429625 YP_008354078.1 CDS CTRC966_02640 NC_021898.1 575118 575819 D COG0095 Lipoate-protein ligase A; lipoate-protein ligase A 575118..575819 Chlamydia trachomatis RC-J/966 16429626 YP_008354079.1 CDS ndk NC_021898.1 575876 576301 R COG0105 Nucleoside diphosphate kinase; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase complement(575876..576301) Chlamydia trachomatis RC-J/966 16429627 YP_008354080.1 CDS ruvA NC_021898.1 576461 577063 R COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA complement(576461..577063) Chlamydia trachomatis RC-J/966 16429628 YP_008354081.1 CDS ruvC NC_021898.1 577083 577595 R COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase complement(577083..577595) Chlamydia trachomatis RC-J/966 16429629 YP_008354082.1 CDS CTRC966_02660 NC_021898.1 577703 578257 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); hypothetical protein complement(577703..578257) Chlamydia trachomatis RC-J/966 16429630 YP_008354083.1 CDS CTRC966_02665 NC_021898.1 578544 579410 R hypothetical protein complement(578544..579410) Chlamydia trachomatis RC-J/966 16429632 YP_008354084.1 CDS CTRC966_02670 NC_021898.1 579421 580425 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(579421..580425) Chlamydia trachomatis RC-J/966 16429633 YP_008354085.1 CDS rplQ NC_021898.1 580469 580894 R COG0203 Ribosomal protein L17; 50S ribosomal protein L17 complement(580469..580894) Chlamydia trachomatis RC-J/966 16429634 YP_008354086.1 CDS CTRC966_02680 NC_021898.1 580903 582036 R COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(580903..582036) Chlamydia trachomatis RC-J/966 16429635 YP_008354087.1 CDS CTRC966_02685 NC_021898.1 582057 582455 R COG0100 Ribosomal protein S11; 30S ribosomal protein S11 complement(582057..582455) Chlamydia trachomatis RC-J/966 16429636 YP_008354088.1 CDS rpsM NC_021898.1 582477 582845 R COG0099 Ribosomal protein S13; 30S ribosomal protein S13 complement(582477..582845) Chlamydia trachomatis RC-J/966 16429637 YP_008354089.1 CDS secY NC_021898.1 582901 584274 R COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY complement(582901..584274) Chlamydia trachomatis RC-J/966 16429638 YP_008354090.1 CDS rplO NC_021898.1 584297 584731 R COG0200 Ribosomal protein L15; 50S ribosomal protein L15 complement(584297..584731) Chlamydia trachomatis RC-J/966 16429639 YP_008354091.1 CDS rpsE NC_021898.1 584724 585221 R COG0098 Ribosomal protein S5; 30S ribosomal protein S5 complement(584724..585221) Chlamydia trachomatis RC-J/966 16429640 YP_008354092.1 CDS rplR NC_021898.1 585236 585607 R COG0256 Ribosomal protein L18; 50S ribosomal protein L18 complement(585236..585607) Chlamydia trachomatis RC-J/966 16429641 YP_008354093.1 CDS rplF NC_021898.1 585629 586180 R COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(585629..586180) Chlamydia trachomatis RC-J/966 16429642 YP_008354094.1 CDS rpsH NC_021898.1 586208 586609 R COG0096 Ribosomal protein S8; 30S ribosomal protein S8 complement(586208..586609) Chlamydia trachomatis RC-J/966 16429643 YP_008354095.1 CDS rplE NC_021898.1 586627 587169 R COG0094 Ribosomal protein L5; 50S ribosomal protein L5 complement(586627..587169) Chlamydia trachomatis RC-J/966 16429644 YP_008354096.1 CDS rplX NC_021898.1 587171 587506 R COG0198 Ribosomal protein L24; 50S ribosomal protein L24 complement(587171..587506) Chlamydia trachomatis RC-J/966 16429645 YP_008354097.1 CDS rplN NC_021898.1 587519 587887 R COG0093 Ribosomal protein L14; 50S ribosomal protein L14 complement(587519..587887) Chlamydia trachomatis RC-J/966 16429646 YP_008354098.1 CDS rpsQ NC_021898.1 587904 588155 R COG0186 Ribosomal protein S17; 30S ribosomal protein S17 complement(587904..588155) Chlamydia trachomatis RC-J/966 16429647 YP_008354099.1 CDS CTRC966_02745 NC_021898.1 588148 588366 R COG0255 Ribosomal protein L29; 50S ribosomal protein L29 complement(588148..588366) Chlamydia trachomatis RC-J/966 16429648 YP_008354100.1 CDS rplP NC_021898.1 588368 588784 R COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(588368..588784) Chlamydia trachomatis RC-J/966 16429649 YP_008354101.1 CDS rpsC NC_021898.1 588817 589491 R COG0092 Ribosomal protein S3; 30S ribosomal protein S3 complement(588817..589491) Chlamydia trachomatis RC-J/966 16429650 YP_008354102.1 CDS rplV NC_021898.1 589501 589836 R COG0091 Ribosomal protein L22; 50S ribosomal protein L22 complement(589501..589836) Chlamydia trachomatis RC-J/966 16429651 YP_008354103.1 CDS rpsS NC_021898.1 589855 590121 R COG0185 Ribosomal protein S19; 30S ribosomal protein S19 complement(589855..590121) Chlamydia trachomatis RC-J/966 16429652 YP_008354104.1 CDS rplB NC_021898.1 590127 590981 R COG0090 Ribosomal protein L2; 50S ribosomal protein L2 complement(590127..590981) Chlamydia trachomatis RC-J/966 16429653 YP_008354105.1 CDS rplW NC_021898.1 591005 591340 R COG0089 Ribosomal protein L23; 50S ribosomal protein L23 complement(591005..591340) Chlamydia trachomatis RC-J/966 16429654 YP_008354106.1 CDS rplD NC_021898.1 591356 592024 R COG0088 Ribosomal protein L4; 50S ribosomal protein L4 complement(591356..592024) Chlamydia trachomatis RC-J/966 16429655 YP_008354107.1 CDS rplC NC_021898.1 592033 592698 R COG0087 Ribosomal protein L3; 50S ribosomal protein L3 complement(592033..592698) Chlamydia trachomatis RC-J/966 16429656 YP_008354108.1 CDS CTRC966_02790 NC_021898.1 593133 594029 R hypothetical protein complement(593133..594029) Chlamydia trachomatis RC-J/966 16429657 YP_008354109.1 CDS fmt NC_021898.1 594195 595145 R COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(594195..595145) Chlamydia trachomatis RC-J/966 16429658 YP_008354110.1 CDS CTRC966_02800 NC_021898.1 595135 595977 R COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase complement(595135..595977) Chlamydia trachomatis RC-J/966 16429659 YP_008354111.1 CDS fabZ NC_021898.1 595989 596450 R COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(595989..596450) Chlamydia trachomatis RC-J/966 16429660 YP_008354112.1 CDS lpxC NC_021898.1 596447 597307 R COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(596447..597307) Chlamydia trachomatis RC-J/966 16429661 YP_008354113.1 CDS lnt NC_021898.1 597407 599035 R COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(597407..599035) Chlamydia trachomatis RC-J/966 16429662 YP_008354114.1 CDS CTRC966_02820 NC_021898.1 599099 599581 R COG1607 Acyl-CoA hydrolase; acyl-CoA hydrolase complement(599099..599581) Chlamydia trachomatis RC-J/966 16429663 YP_008354115.1 CDS CTRC966_02825 NC_021898.1 599717 600469 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(599717..600469) Chlamydia trachomatis RC-J/966 16429664 YP_008354116.1 CDS CTRC966_02830 NC_021898.1 600473 600946 R COG0802 Predicted ATPase or kinase; putative nucleotide-binding protein complement(600473..600946) Chlamydia trachomatis RC-J/966 16429665 YP_008354117.1 CDS CTRC966_02835 NC_021898.1 600925 601641 R hypothetical protein complement(600925..601641) Chlamydia trachomatis RC-J/966 16429666 YP_008354118.1 CDS CTRC966_02840 NC_021898.1 602363 602671 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 602363..602671 Chlamydia trachomatis RC-J/966 16429668 YP_008354119.1 CDS CTRC966_02845 NC_021898.1 602721 603176 R COG0219 Predicted rRNA methylase (SpoU class); SpoU family rRNA methylase complement(602721..603176) Chlamydia trachomatis RC-J/966 16429669 YP_008354120.1 CDS CTRC966_02850 NC_021898.1 603192 603923 R COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; peptidyl-prolyl cis-trans isomerase complement(603192..603923) Chlamydia trachomatis RC-J/966 16429670 YP_008354121.1 CDS aspS NC_021898.1 604061 605809 R COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase complement(604061..605809) Chlamydia trachomatis RC-J/966 16429671 YP_008354122.1 CDS hisS NC_021898.1 605790 607076 R COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(605790..607076) Chlamydia trachomatis RC-J/966 16429672 YP_008354123.1 CDS CTRC966_02865 NC_021898.1 607512 608882 D COG2271 Sugar phosphate permease; putative sugar phosphate permease 607512..608882 Chlamydia trachomatis RC-J/966 16429673 YP_008354124.1 CDS dnaE NC_021898.1 608896 612609 D COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 608896..612609 Chlamydia trachomatis RC-J/966 16429674 YP_008354125.1 CDS CTRC966_02875 NC_021898.1 612838 613707 R hypothetical protein complement(612838..613707) Chlamydia trachomatis RC-J/966 16429675 YP_008354126.1 CDS CTRC966_02880 NC_021898.1 613859 614815 D COG1729 Uncharacterized protein conserved in bacteria; hypothetical protein 613859..614815 Chlamydia trachomatis RC-J/966 16429676 YP_008354127.1 CDS CTRC966_02885 NC_021898.1 614840 615424 D hypothetical protein 614840..615424 Chlamydia trachomatis RC-J/966 16429677 YP_008354128.1 CDS CTRC966_02890 NC_021898.1 615411 615851 D COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); sigma regulatory factor-histidine kinase 615411..615851 Chlamydia trachomatis RC-J/966 16429678 YP_008354129.1 CDS CTRC966_02895 NC_021898.1 615858 616283 R hypothetical protein complement(615858..616283) Chlamydia trachomatis RC-J/966 16429679 YP_008354130.1 CDS CTRC966_02900 NC_021898.1 616391 617704 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 616391..617704 Chlamydia trachomatis RC-J/966 16429680 YP_008354131.1 CDS CTRC966_02905 NC_021898.1 617837 618244 D hypothetical protein 617837..618244 Chlamydia trachomatis RC-J/966 16429681 YP_008354132.1 CDS CTRC966_02910 NC_021898.1 618241 619347 D COG0144 tRNA and rRNA cytosine-C5-methylases; putative methyltransferase 618241..619347 Chlamydia trachomatis RC-J/966 16429682 YP_008354133.1 CDS CTRC966_02915 NC_021898.1 619497 620732 D COG1114 Branched-chain amino acid permeases; branched-chain amino acid transport system carrier protein 619497..620732 Chlamydia trachomatis RC-J/966 16429683 YP_008354134.1 CDS CTRC966_02920 NC_021898.1 620906 624505 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; helicase 620906..624505 Chlamydia trachomatis RC-J/966 16429684 YP_008354135.1 CDS CTRC966_02925 NC_021898.1 624684 625163 D hypothetical protein 624684..625163 Chlamydia trachomatis RC-J/966 16429685 YP_008354136.1 CDS CTRC966_02930 NC_021898.1 625372 626769 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase 625372..626769 Chlamydia trachomatis RC-J/966 16429686 YP_008354137.1 CDS CTRC966_02935 NC_021898.1 626766 627701 D COG0320 Lipoate synthase; lipoyl synthase 626766..627701 Chlamydia trachomatis RC-J/966 16429687 YP_008354138.1 CDS CTRC966_02940 NC_021898.1 627805 628782 D COG4669 Type III secretory pathway, lipoprotein EscJ; type III secretion system protein, membrane component 627805..628782 Chlamydia trachomatis RC-J/966 16429688 YP_008354139.1 CDS CTRC966_02945 NC_021898.1 628783 629619 D hypothetical protein 628783..629619 Chlamydia trachomatis RC-J/966 16429689 YP_008354140.1 CDS CTRC966_02950 NC_021898.1 629704 629898 D hypothetical protein 629704..629898 Chlamydia trachomatis RC-J/966 16429690 YP_008354141.1 CDS CTRC966_02955 NC_021898.1 629895 630566 D COG1317 Flagellar biosynthesis/type III secretory pathway protein; type III secretion system protein 629895..630566 Chlamydia trachomatis RC-J/966 16429691 YP_008354142.1 CDS CTRC966_02960 NC_021898.1 630579 631499 D COG1338 Flagellar biosynthesis pathway, component FliP; type III secretion system protein 630579..631499 Chlamydia trachomatis RC-J/966 16429692 YP_008354143.1 CDS CTRC966_02965 NC_021898.1 631511 631795 D COG4794 Type III secretory pathway, component EscS; type III secretion system, membrane protein 631511..631795 Chlamydia trachomatis RC-J/966 16429693 YP_008354144.1 CDS CTRC966_02970 NC_021898.1 631802 632671 D COG4791 Type III secretory pathway, component EscT; type III secretion system, membrane protein 631802..632671 Chlamydia trachomatis RC-J/966 16429694 YP_008354145.1 CDS CTRC966_02975 NC_021898.1 632750 633193 R hypothetical protein complement(632750..633193) Chlamydia trachomatis RC-J/966 16429695 YP_008354146.1 CDS CTRC966_02980 NC_021898.1 633283 634275 R hypothetical protein complement(633283..634275) Chlamydia trachomatis RC-J/966 16429696 YP_008354147.1 CDS CTRC966_02985 NC_021898.1 634281 634805 R hypothetical protein complement(634281..634805) Chlamydia trachomatis RC-J/966 16429697 YP_008354148.1 CDS CTRC966_02990 NC_021898.1 634790 635245 R hypothetical protein complement(634790..635245) Chlamydia trachomatis RC-J/966 16429698 YP_008354149.1 CDS CTRC966_02995 NC_021898.1 635229 635558 R general secretion pathway protein G complement(635229..635558) Chlamydia trachomatis RC-J/966 16429699 YP_008354150.1 CDS CTRC966_03000 NC_021898.1 635620 636795 R COG1459 Type II secretory pathway, component PulF; general secretion pathway protein F complement(635620..636795) Chlamydia trachomatis RC-J/966 16429700 YP_008354151.1 CDS CTRC966_03005 NC_021898.1 636807 638312 R COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; general secretion pathway protein E complement(636807..638312) Chlamydia trachomatis RC-J/966 16429701 YP_008354152.1 CDS CTRC966_03010 NC_021898.1 638296 640578 R COG1450 Type II secretory pathway, component PulD; general secretion pathway protein D complement(638296..640578) Chlamydia trachomatis RC-J/966 16429702 YP_008354153.1 CDS CTRC966_03015 NC_021898.1 640579 641808 R hypothetical protein complement(640579..641808) Chlamydia trachomatis RC-J/966 16429703 YP_008354154.1 CDS CTRC966_03020 NC_021898.1 641936 643006 R COG0006 Xaa-Pro aminopeptidase; proline dipeptidase complement(641936..643006) Chlamydia trachomatis RC-J/966 16429704 YP_008354155.1 CDS mutL NC_021898.1 643017 644747 R COG0323 DNA mismatch repair enzyme (predicted ATPase); DNA mismatch repair protein complement(643017..644747) Chlamydia trachomatis RC-J/966 16429705 YP_008354156.1 CDS CTRC966_03030 NC_021898.1 645042 645740 D COG0457 FOG: TPR repeat; type III secretion chaperone (low calcium response protein H) 645042..645740 Chlamydia trachomatis RC-J/966 16429706 YP_008354157.1 CDS CTRC966_03035 NC_021898.1 645757 646116 D hypothetical protein 645757..646116 Chlamydia trachomatis RC-J/966 16429707 YP_008354158.1 CDS CTRC966_03040 NC_021898.1 646153 647616 D putative type III secretion system membrane protein 646153..647616 Chlamydia trachomatis RC-J/966 16429708 YP_008354159.1 CDS CTRC966_03045 NC_021898.1 647647 648966 D putative type III secretion system protein 647647..648966 Chlamydia trachomatis RC-J/966 16429709 YP_008354160.1 CDS CTRC966_03050 NC_021898.1 649044 650027 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative integral membrane protein complement(649044..650027) Chlamydia trachomatis RC-J/966 16429710 YP_008354161.1 CDS thrS NC_021898.1 650332 652239 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 650332..652239 Chlamydia trachomatis RC-J/966 16429711 YP_008354162.1 CDS CTRC966_03060 NC_021898.1 652691 653458 D COG1192 ATPases involved in chromosome partitioning; Chromosome partitioning ATPase (ParA family) protein 652691..653458 Chlamydia trachomatis RC-J/966 16429712 YP_008354163.1 CDS CTRC966_03065 NC_021898.1 653463 654254 D COG0542 ATPases with chaperone activity, ATP-binding subunit; virulence plasmid protein pGP6-D-related protein 653463..654254 Chlamydia trachomatis RC-J/966 16429713 YP_008354164.1 CDS CTRC966_03070 NC_021898.1 654220 654771 D hypothetical protein 654220..654771 Chlamydia trachomatis RC-J/966 16429714 YP_008354165.1 CDS CTRC966_03075 NC_021898.1 654950 655990 D COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 654950..655990 Chlamydia trachomatis RC-J/966 16429715 YP_008354166.1 CDS CTRC966_03080 NC_021898.1 656015 658021 D COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B 656015..658021 Chlamydia trachomatis RC-J/966 16429716 YP_008354167.1 CDS eno NC_021898.1 658183 659457 D COG0148 Enolase; enolase 658183..659457 Chlamydia trachomatis RC-J/966 16429717 YP_008354168.1 CDS CTRC966_03090 NC_021898.1 659585 661537 D COG2208 Serine phosphatase RsbU, regulator of sigma subunit; sigma regulatory family protein-PP2C phosphatase 659585..661537 Chlamydia trachomatis RC-J/966 16429718 YP_008354169.1 CDS CTRC966_03095 NC_021898.1 661662 663470 D hypothetical protein 661662..663470 Chlamydia trachomatis RC-J/966 16429719 YP_008354170.1 CDS CTRC966_03100 NC_021898.1 663485 666349 R hypothetical protein complement(663485..666349) Chlamydia trachomatis RC-J/966 16429720 YP_008354171.1 CDS sdhB NC_021898.1 666446 667144 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; succinate dehydrogenase iron-sulfur subunit complement(666446..667144) Chlamydia trachomatis RC-J/966 16429721 YP_008354172.1 CDS sdhA NC_021898.1 667223 669103 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase flavoprotein subunit complement(667223..669103) Chlamydia trachomatis RC-J/966 16429722 YP_008354173.1 CDS CTRC966_03115 NC_021898.1 669100 669618 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase cytochrome b558 subunit complement(669100..669618) Chlamydia trachomatis RC-J/966 16429723 YP_008354174.1 CDS CTRC966_03120 NC_021898.1 669770 669961 R succinate dehydrogenase, cytochrome b558 subunit, putative complement(669770..669961) Chlamydia trachomatis RC-J/966 16429724 YP_008354175.1 CDS CTRC966_03125 NC_021898.1 670108 670899 R COG0084 Mg-dependent DNase; putative hydrolase complement(670108..670899) Chlamydia trachomatis RC-J/966 16429725 YP_008354176.1 CDS CTRC966_03130 NC_021898.1 670984 673062 R COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis; thiol:disulfide interchange protein complement(670984..673062) Chlamydia trachomatis RC-J/966 16429726 YP_008354177.1 CDS CTRC966_03135 NC_021898.1 673215 673913 D COG0811 Biopolymer transport proteins; macromolecule transporter 673215..673913 Chlamydia trachomatis RC-J/966 16429727 YP_008354178.1 CDS CTRC966_03140 NC_021898.1 673910 674317 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 673910..674317 Chlamydia trachomatis RC-J/966 16429728 YP_008354179.1 CDS CTRC966_03145 NC_021898.1 674320 675027 D histone H1-I 674320..675027 Chlamydia trachomatis RC-J/966 16429729 YP_008354180.1 CDS tolB NC_021898.1 675027 676322 D COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB 675027..676322 Chlamydia trachomatis RC-J/966 16429730 YP_008354181.1 CDS CTRC966_03155 NC_021898.1 676319 676885 D COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein 676319..676885 Chlamydia trachomatis RC-J/966 16429731 YP_008354182.1 CDS CTRC966_03160 NC_021898.1 676875 677477 D COG1388 FOG: LysM repeat; putative soluble transglycosylase 676875..677477 Chlamydia trachomatis RC-J/966 16429732 YP_008354183.1 CDS CTRC966_03165 NC_021898.1 677548 677940 D COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; hypothetical protein 677548..677940 Chlamydia trachomatis RC-J/966 16429733 YP_008354184.1 CDS CTRC966_03170 NC_021898.1 677937 678524 R COG0450 Peroxiredoxin; thioredoxin peroxidase complement(677937..678524) Chlamydia trachomatis RC-J/966 16429734 YP_008354185.1 CDS CTRC966_03175 NC_021898.1 678732 680333 R COG0459 Chaperonin GroEL (HSP60 family); 60 kDa chaperonin GroEL2 complement(678732..680333) Chlamydia trachomatis RC-J/966 16429736 YP_008354186.1 CDS CTRC966_03180 NC_021898.1 680413 681639 R COG3876 Uncharacterized protein conserved in bacteria; hypothetical protein complement(680413..681639) Chlamydia trachomatis RC-J/966 16429737 YP_008354187.1 CDS CTRC966_03185 NC_021898.1 681746 681838 D hypothetical protein 681746..681838 Chlamydia trachomatis RC-J/966 16429738 YP_008354188.1 CDS CTRC966_03190 NC_021898.1 681835 682464 D COG0127 Xanthosine triphosphate pyrophosphatase; dITP/XTP pyrophosphatase 681835..682464 Chlamydia trachomatis RC-J/966 16429739 YP_008354189.1 CDS CTRC966_03195 NC_021898.1 682438 682665 R hypothetical protein complement(682438..682665) Chlamydia trachomatis RC-J/966 16429740 YP_008354190.1 CDS CTRC966_03200 NC_021898.1 682662 683351 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(682662..683351) Chlamydia trachomatis RC-J/966 16429741 YP_008354191.1 CDS CTRC966_03205 NC_021898.1 683432 685336 D COG0210 Superfamily I DNA and RNA helicases; DNA helicase 683432..685336 Chlamydia trachomatis RC-J/966 16429742 YP_008354192.1 CDS CTRC966_03210 NC_021898.1 685340 686650 D COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 685340..686650 Chlamydia trachomatis RC-J/966 16429743 YP_008354193.1 CDS CTRC966_03215 NC_021898.1 686758 687453 R COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; hypothetical protein complement(686758..687453) Chlamydia trachomatis RC-J/966 16429744 YP_008354194.1 CDS CTRC966_03220 NC_021898.1 687450 688181 R COG1478 Uncharacterized conserved protein; hypothetical protein complement(687450..688181) Chlamydia trachomatis RC-J/966 16429745 YP_008354195.1 CDS CTRC966_03225 NC_021898.1 688153 688632 R COG0262 Dihydrofolate reductase; dihydrofolate reductase complement(688153..688632) Chlamydia trachomatis RC-J/966 16429746 YP_008354196.1 CDS CTRC966_03230 NC_021898.1 688629 689981 R COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase complement(688629..689981) Chlamydia trachomatis RC-J/966 16429747 YP_008354197.1 CDS CTRC966_03235 NC_021898.1 689978 690352 R COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase complement(689978..690352) Chlamydia trachomatis RC-J/966 16429748 YP_008354198.1 CDS CTRC966_03240 NC_021898.1 690371 692086 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor complement(690371..692086) Chlamydia trachomatis RC-J/966 16429749 YP_008354199.1 CDS CTRC966_03245 NC_021898.1 692234 693523 R putative integral membrane protein complement(692234..693523) Chlamydia trachomatis RC-J/966 16429750 YP_008354200.1 CDS rpsT NC_021898.1 693972 694268 D COG0268 Ribosomal protein S20; 30S ribosomal protein S20 693972..694268 Chlamydia trachomatis RC-J/966 16429751 YP_008354201.1 CDS CTRC966_03255 NC_021898.1 694501 695301 D hypothetical protein 694501..695301 Chlamydia trachomatis RC-J/966 16429752 YP_008354202.1 CDS CTRC966_03260 NC_021898.1 695357 697990 R hypothetical protein complement(695357..697990) Chlamydia trachomatis RC-J/966 16429753 YP_008354203.1 CDS CTRC966_03265 NC_021898.1 698105 700621 D COG0525 Valyl-tRNA synthetase; hypothetical protein 698105..700621 Chlamydia trachomatis RC-J/966 16429754 YP_008354204.1 CDS CTRC966_03270 NC_021898.1 700685 703183 R hypothetical protein complement(700685..703183) Chlamydia trachomatis RC-J/966 16429755 YP_008354205.1 CDS CTRC966_03275 NC_021898.1 703411 705366 R CHLPN 76 kD protein-like protein complement(703411..705366) Chlamydia trachomatis RC-J/966 16429756 YP_008354206.1 CDS CTRC966_03280 NC_021898.1 705474 706772 R hypothetical protein complement(705474..706772) Chlamydia trachomatis RC-J/966 16429757 YP_008354207.1 CDS CTRC966_03285 NC_021898.1 707015 708625 R COG0728 Uncharacterized membrane protein, putative virulence factor; integral membrane protein complement(707015..708625) Chlamydia trachomatis RC-J/966 16429758 YP_008354208.1 CDS CTRC966_03290 NC_021898.1 708798 709664 D COG0648 Endonuclease IV; endonuclease IV 708798..709664 Chlamydia trachomatis RC-J/966 16429759 YP_008354209.1 CDS CTRC966_03295 NC_021898.1 709647 709739 R hypothetical protein complement(709647..709739) Chlamydia trachomatis RC-J/966 16429760 YP_008354210.1 CDS rpsD NC_021898.1 709761 710390 R COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 complement(709761..710390) Chlamydia trachomatis RC-J/966 16429761 YP_008354211.1 CDS CTRC966_03305 NC_021898.1 710774 711757 D COG1054 Predicted sulfurtransferase; putative rhodanese-related sulfurtransferase 710774..711757 Chlamydia trachomatis RC-J/966 16429762 YP_008354212.1 CDS CTRC966_03310 NC_021898.1 711829 712704 R COG0142 Geranylgeranyl pyrophosphate synthase; dimethylallyltransferase complement(711829..712704) Chlamydia trachomatis RC-J/966 16429763 YP_008354213.1 CDS CTRC966_03315 NC_021898.1 712760 713377 R COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); glucosamine-1-phosphate acetyltransferase complement(712760..713377) Chlamydia trachomatis RC-J/966 16429764 YP_008354214.1 CDS CTRC966_03320 NC_021898.1 713430 714113 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; CpxR complement(713430..714113) Chlamydia trachomatis RC-J/966 16429765 YP_008354215.1 CDS CTRC966_03325 NC_021898.1 714291 714545 D hypothetical protein 714291..714545 Chlamydia trachomatis RC-J/966 16429766 YP_008354216.1 CDS CTRC966_03330 NC_021898.1 714726 716315 R COG1351 Predicted alternative thymidylate synthase; hypothetical protein complement(714726..716315) Chlamydia trachomatis RC-J/966 16429768 YP_008354217.1 CDS CTRC966_03335 NC_021898.1 716364 716528 R hypothetical protein complement(716364..716528) Chlamydia trachomatis RC-J/966 16429769 YP_008354218.1 CDS CTRC966_03340 NC_021898.1 716613 717629 D COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 716613..717629 Chlamydia trachomatis RC-J/966 16429770 YP_008354219.1 CDS CTRC966_03345 NC_021898.1 717655 719052 R COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA; Na(+)-translocating NADH-quinone reductase subunit A complement(717655..719052) Chlamydia trachomatis RC-J/966 16429771 YP_008354220.1 CDS CTRC966_03350 NC_021898.1 719074 719508 R hypothetical protein complement(719074..719508) Chlamydia trachomatis RC-J/966 16429772 YP_008354221.1 CDS CTRC966_03355 NC_021898.1 719622 721769 D COG1747 Uncharacterized N-terminal domain of the transcription elongation factor GreA; transcript cleavage factor/unknown domain fusion protein 719622..721769 Chlamydia trachomatis RC-J/966 16429773 YP_008354222.1 CDS CTRC966_03360 NC_021898.1 721957 723159 D COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase 721957..723159 Chlamydia trachomatis RC-J/966 16429775 YP_008354223.1 CDS CTRC966_03365 NC_021898.1 723134 724144 D COG1792 Cell shape-determining protein; rod shape-determining protein MreC 723134..724144 Chlamydia trachomatis RC-J/966 16429776 YP_008354224.1 CDS CTRC966_03370 NC_021898.1 724160 727240 R COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); exodeoxyribonuclease V beta chain complement(724160..727240) Chlamydia trachomatis RC-J/966 16429777 YP_008354225.1 CDS CTRC966_03375 NC_021898.1 727242 730256 R COG1330 Exonuclease V gamma subunit; exodeoxyribonuclease V gamma chain complement(727242..730256) Chlamydia trachomatis RC-J/966 16429778 YP_008354226.1 CDS CTRC966_03380 NC_021898.1 730269 731948 D COG0477 Permeases of the major facilitator superfamily; putative membrane efflux protein 730269..731948 Chlamydia trachomatis RC-J/966 16429779 YP_008354227.1 CDS CTRC966_03385 NC_021898.1 731968 732783 R hypothetical protein complement(731968..732783) Chlamydia trachomatis RC-J/966 16429780 YP_008354228.1 CDS CTRC966_03390 NC_021898.1 733678 736251 D COG0550 Topoisomerase IA; DNA topoisomerase I/SWI domain fusion protein 733678..736251 Chlamydia trachomatis RC-J/966 16429781 YP_008354229.1 CDS CTRC966_03395 NC_021898.1 736281 737285 R COG0042 tRNA-dihydrouridine synthase; putative oxidoreductase complement(736281..737285) Chlamydia trachomatis RC-J/966 16429782 YP_008354230.1 CDS CTRC966_03400 NC_021898.1 737264 737560 R COG0762 Predicted integral membrane protein; integral membrane protein complement(737264..737560) Chlamydia trachomatis RC-J/966 16429783 YP_008354231.1 CDS CTRC966_03405 NC_021898.1 737661 739040 D hypothetical protein 737661..739040 Chlamydia trachomatis RC-J/966 16429784 YP_008354232.1 CDS CTRC966_03410 NC_021898.1 739040 739618 D hypothetical protein 739040..739618 Chlamydia trachomatis RC-J/966 16429785 YP_008354233.1 CDS CTRC966_03415 NC_021898.1 739609 740883 D COG2849 Uncharacterized protein conserved in bacteria; hypothetical protein 739609..740883 Chlamydia trachomatis RC-J/966 16429786 YP_008354234.1 CDS CTRC966_03420 NC_021898.1 740886 741422 D COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 740886..741422 Chlamydia trachomatis RC-J/966 16429787 YP_008354235.1 CDS CTRC966_03425 NC_021898.1 741419 741637 R hypothetical protein complement(741419..741637) Chlamydia trachomatis RC-J/966 16429788 YP_008354236.1 CDS recA NC_021898.1 741683 742741 D COG0468 RecA/RadA recombinase; recombinase A 741683..742741 Chlamydia trachomatis RC-J/966 16429789 YP_008354237.1 CDS CTRC966_03435 NC_021898.1 743027 744853 D putative exported lipoprotein 743027..744853 Chlamydia trachomatis RC-J/966 16429790 YP_008354238.1 CDS CTRC966_03440 NC_021898.1 744850 746340 D COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; exodeoxyribonuclease V alpha chain 744850..746340 Chlamydia trachomatis RC-J/966 16429791 YP_008354239.1 CDS CTRC966_03445 NC_021898.1 746406 746585 D hypothetical protein 746406..746585 Chlamydia trachomatis RC-J/966 16429792 YP_008354240.1 CDS CTRC966_03450 NC_021898.1 746686 747405 R COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein complement(746686..747405) Chlamydia trachomatis RC-J/966 16429793 YP_008354241.1 CDS CTRC966_03455 NC_021898.1 747414 747902 R hypothetical protein complement(747414..747902) Chlamydia trachomatis RC-J/966 16429794 YP_008354242.1 CDS CTRC966_03460 NC_021898.1 747899 748708 R COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(747899..748708) Chlamydia trachomatis RC-J/966 16429795 YP_008354243.1 CDS CTRC966_03470 NC_021898.1 749194 749487 D hypothetical protein 749194..749487 Chlamydia trachomatis RC-J/966 16429797 YP_008354244.1 CDS CTRC966_03475 NC_021898.1 749487 749804 D hypothetical protein 749487..749804 Chlamydia trachomatis RC-J/966 16429798 YP_008354245.1 CDS CTRC966_03480 NC_021898.1 749886 750893 D COG0564 Pseudouridylate synthases, 23S RNA-specific; ribosomal large subunit pseudouridine synthase D 749886..750893 Chlamydia trachomatis RC-J/966 16429799 YP_008354246.1 CDS CTRC966_03485 NC_021898.1 750993 751229 D COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein 750993..751229 Chlamydia trachomatis RC-J/966 16429800 YP_008354247.1 CDS CTRC966_03490 NC_021898.1 751368 752840 R COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA topoisomerase IV subunit A complement(751368..752840) Chlamydia trachomatis RC-J/966 16429801 YP_008354248.1 CDS CTRC966_03495 NC_021898.1 752855 754672 R COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA topoisomerase IV subunit B complement(752855..754672) Chlamydia trachomatis RC-J/966 16429802 YP_008354249.1 CDS hemA NC_021898.1 755052 756059 D COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase 755052..756059 Chlamydia trachomatis RC-J/966 16429803 YP_008354250.1 CDS CTRC966_03505 NC_021898.1 756777 757178 D COG1072 Panthothenate kinase; Type III secretion system chaperone 756777..757178 Chlamydia trachomatis RC-J/966 16429804 YP_008354251.1 CDS CTRC966_03510 NC_021898.1 757182 759671 D COG1716 FOG: FHA domain; phosphopeptide binding protein ( to be a TTSS protein) 757182..759671 Chlamydia trachomatis RC-J/966 16429805 YP_008354252.1 CDS CTRC966_03515 NC_021898.1 759715 759966 D hypothetical protein 759715..759966 Chlamydia trachomatis RC-J/966 16429806 YP_008354253.1 CDS CTRC966_03520 NC_021898.1 759993 760244 D hypothetical protein 759993..760244 Chlamydia trachomatis RC-J/966 16429807 YP_008354254.1 CDS CTRC966_03525 NC_021898.1 760263 760712 D COG0457 FOG: TPR repeat; hypothetical protein 760263..760712 Chlamydia trachomatis RC-J/966 16429808 YP_008354255.1 CDS CTRC966_03530 NC_021898.1 760732 761403 D hypothetical protein 760732..761403 Chlamydia trachomatis RC-J/966 16429809 YP_008354256.1 CDS CTRC966_03535 NC_021898.1 761405 762733 D COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; type III secretion system ATPase 761405..762733 Chlamydia trachomatis RC-J/966 16429810 YP_008354257.1 CDS CTRC966_03540 NC_021898.1 762756 763262 D hypothetical protein 762756..763262 Chlamydia trachomatis RC-J/966 16429811 YP_008354258.1 CDS CTRC966_03545 NC_021898.1 763266 764117 D COG1879 ABC-type sugar transport system, periplasmic component; hypothetical protein 763266..764117 Chlamydia trachomatis RC-J/966 16429812 YP_008354259.1 CDS CTRC966_03550 NC_021898.1 764127 765248 D COG1886 Flagellar motor switch/type III secretory pathway protein; type III secretion system protein 764127..765248 Chlamydia trachomatis RC-J/966 16429813 YP_008354260.1 CDS CTRC966_03555 NC_021898.1 765383 766855 D COG0515 Serine/threonine protein kinase; putative serine/threonine-protein kinase (TTSS effector protein) 765383..766855 Chlamydia trachomatis RC-J/966 16429814 YP_008354261.1 CDS CTRC966_03560 NC_021898.1 766852 769617 D COG1450 Type II secretory pathway, component PulD; Yop proteins translocation protein C/general secretion pathway protein 766852..769617 Chlamydia trachomatis RC-J/966 16429815 YP_008354262.1 CDS CTRC966_03565 NC_021898.1 769930 771000 R COG3869 Arginine kinase; ATP:guanido phosphotransferase complement(769930..771000) Chlamydia trachomatis RC-J/966 16429817 YP_008354263.1 CDS CTRC966_03570 NC_021898.1 770990 771511 R COG3880 Uncharacterized protein with conserved CXXC pairs; hypothetical protein complement(770990..771511) Chlamydia trachomatis RC-J/966 16429818 YP_008354264.1 CDS CTRC966_03575 NC_021898.1 771503 771625 D hypothetical protein 771503..771625 Chlamydia trachomatis RC-J/966 16429819 YP_008354265.1 CDS frr NC_021898.1 771882 772421 R COG0233 Ribosome recycling factor; ribosome recycling factor complement(771882..772421) Chlamydia trachomatis RC-J/966 16429822 YP_008354266.1 CDS pyrH NC_021898.1 772418 773155 R COG0528 Uridylate kinase; uridylate kinase complement(772418..773155) Chlamydia trachomatis RC-J/966 16429823 YP_008354267.1 CDS tsf NC_021898.1 773168 774016 R COG0264 Translation elongation factor Ts; elongation factor Ts complement(773168..774016) Chlamydia trachomatis RC-J/966 16429824 YP_008354268.1 CDS rpsB NC_021898.1 774013 774861 R COG0052 Ribosomal protein S2; 30S ribosomal protein S2 complement(774013..774861) Chlamydia trachomatis RC-J/966 16429825 YP_008354269.1 CDS CTRC966_03600 NC_021898.1 775230 776423 R major outer membrane protein complement(775230..776423) Chlamydia trachomatis RC-J/966 16429827 YP_008354270.1 CDS CTRC966_03605 NC_021898.1 777032 780274 D COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 777032..780274 Chlamydia trachomatis RC-J/966 16429828 YP_008354271.1 CDS CTRC966_03610 NC_021898.1 780338 781345 D COG0457 FOG: TPR repeat; tetratricopeptide repeat protein 780338..781345 Chlamydia trachomatis RC-J/966 16429829 YP_008354272.1 CDS CTRC966_03615 NC_021898.1 781549 781689 R hypothetical protein complement(781549..781689) Chlamydia trachomatis RC-J/966 16429830 YP_008354273.1 CDS CTRC966_03620 NC_021898.1 781688 783139 D COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; cysteine desulfurase activator complex subunit SufB 781688..783139 Chlamydia trachomatis RC-J/966 16429831 YP_008354274.1 CDS CTRC966_03625 NC_021898.1 783142 783909 D COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component; ABC transporter ATP-binding protein 783142..783909 Chlamydia trachomatis RC-J/966 16429832 YP_008354275.1 CDS CTRC966_03630 NC_021898.1 783913 785100 D COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; ABC transporter membrane protein 783913..785100 Chlamydia trachomatis RC-J/966 16429833 YP_008354276.1 CDS CTRC966_03635 NC_021898.1 785093 786298 D COG0520 Selenocysteine lyase; cysteine desulfurase 785093..786298 Chlamydia trachomatis RC-J/966 16429834 YP_008354277.1 CDS CTRC966_03640 NC_021898.1 786434 787279 D COG1475 Predicted transcriptional regulators; putative chromosome partitioning protein 786434..787279 Chlamydia trachomatis RC-J/966 16429835 YP_008354278.1 CDS CTRC966_03645 NC_021898.1 787271 788101 R COG4608 ABC-type oligopeptide transport system, ATPase component; ABC transport protein, ATPase component complement(787271..788101) Chlamydia trachomatis RC-J/966 16429836 YP_008354279.1 CDS CTRC966_03650 NC_021898.1 788094 789059 R COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; peptide ABC transporter ATPase complement(788094..789059) Chlamydia trachomatis RC-J/966 16429837 YP_008354280.1 CDS CTRC966_03655 NC_021898.1 789220 789894 D COG1392 Phosphate transport regulator (distant homolog of PhoU); hypothetical protein 789220..789894 Chlamydia trachomatis RC-J/966 16429838 YP_008354281.1 CDS CTRC966_03660 NC_021898.1 789897 791177 D COG0306 Phosphate/sulphate permeases; inorganic phosphate transporter 789897..791177 Chlamydia trachomatis RC-J/966 16429839 YP_008354282.1 CDS pgk NC_021898.1 791305 792516 D COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase 791305..792516 Chlamydia trachomatis RC-J/966 16429840 YP_008354283.1 CDS CTRC966_03670 NC_021898.1 792775 793746 D hypothetical protein 792775..793746 Chlamydia trachomatis RC-J/966 16429841 YP_008354284.1 CDS CTRC966_03675 NC_021898.1 793797 794993 D hypothetical protein 793797..794993 Chlamydia trachomatis RC-J/966 16429842 YP_008354285.1 CDS CTRC966_03680 NC_021898.1 795079 796257 D hypothetical protein 795079..796257 Chlamydia trachomatis RC-J/966 16429843 YP_008354286.1 CDS CTRC966_03685 NC_021898.1 796254 796889 R COG0177 Predicted EndoIII-related endonuclease; endonuclease III complement(796254..796889) Chlamydia trachomatis RC-J/966 16429844 YP_008354287.1 CDS trmE NC_021898.1 796896 798230 R COG0486 Predicted GTPase; tRNA modification GTPase TrmE complement(796896..798230) Chlamydia trachomatis RC-J/966 16429845 YP_008354288.1 CDS CTRC966_03695 NC_021898.1 798497 799402 D COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 798497..799402 Chlamydia trachomatis RC-J/966 16429846 YP_008354289.1 CDS CTRC966_03700 NC_021898.1 799467 800792 D COG0457 FOG: TPR repeat; hypothetical protein 799467..800792 Chlamydia trachomatis RC-J/966 16429847 YP_008354290.1 CDS secA NC_021898.1 801051 803960 D COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 801051..803960 Chlamydia trachomatis RC-J/966 16429848 YP_008354291.1 CDS CTRC966_03710 NC_021898.1 804054 804581 R COG0556 Helicase subunit of the DNA excision repair complex; hypothetical protein complement(804054..804581) Chlamydia trachomatis RC-J/966 16429849 YP_008354292.1 CDS CTRC966_03715 NC_021898.1 804658 806130 R COG1160 Predicted GTPases; GTP-binding protein Der complement(804658..806130) Chlamydia trachomatis RC-J/966 16429850 YP_008354293.1 CDS CTRC966_03720 NC_021898.1 806246 807478 R COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; polyA polymerase complement(806246..807478) Chlamydia trachomatis RC-J/966 16429851 YP_008354294.1 CDS clpX NC_021898.1 807493 808752 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(807493..808752) Chlamydia trachomatis RC-J/966 16429852 YP_008354295.1 CDS clpP NC_021898.1 808762 809373 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(808762..809373) Chlamydia trachomatis RC-J/966 16429853 YP_008354296.1 CDS tig NC_021898.1 809540 810868 R COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor complement(809540..810868) Chlamydia trachomatis RC-J/966 16429854 YP_008354297.1 CDS CTRC966_03740 NC_021898.1 810990 811187 R hypothetical protein complement(810990..811187) Chlamydia trachomatis RC-J/966 16429856 YP_008354298.1 CDS CTRC966_03745 NC_021898.1 811226 814717 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; SWF/SNF family helicase 811226..814717 Chlamydia trachomatis RC-J/966 16429857 YP_008354299.1 CDS CTRC966_03750 NC_021898.1 814722 815822 D COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB 814722..815822 Chlamydia trachomatis RC-J/966 16429858 YP_008354300.1 CDS CTRC966_03755 NC_021898.1 815819 817618 D COG1274 Phosphoenolpyruvate carboxykinase (GTP); phosphoenolpyruvate carboxykinase 815819..817618 Chlamydia trachomatis RC-J/966 16429859 YP_008354301.1 CDS CTRC966_03760 NC_021898.1 817730 820033 D hypothetical protein 817730..820033 Chlamydia trachomatis RC-J/966 16429860 YP_008354302.1 CDS CTRC966_03765 NC_021898.1 820060 821232 D hypothetical protein 820060..821232 Chlamydia trachomatis RC-J/966 16429861 YP_008354303.1 CDS CTRC966_03770 NC_021898.1 821298 822320 R outer membrane protein B complement(821298..822320) Chlamydia trachomatis RC-J/966 16429862 YP_008354304.1 CDS gpsA NC_021898.1 822454 823458 R COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(822454..823458) Chlamydia trachomatis RC-J/966 16429863 YP_008354305.1 CDS CTRC966_03780 NC_021898.1 823455 824822 R COG4284 UDP-glucose pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase complement(823455..824822) Chlamydia trachomatis RC-J/966 16429864 YP_008354306.1 CDS CTRC966_03785 NC_021898.1 824834 825199 R hypothetical protein complement(824834..825199) Chlamydia trachomatis RC-J/966 16429865 YP_008354307.1 CDS CTRC966_03790 NC_021898.1 825192 826496 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; type III secretion system ATPase complement(825192..826496) Chlamydia trachomatis RC-J/966 16429866 YP_008354308.1 CDS CTRC966_03795 NC_021898.1 826570 827094 R hypothetical protein complement(826570..827094) Chlamydia trachomatis RC-J/966 16429867 YP_008354309.1 CDS CTRC966_03800 NC_021898.1 827099 828103 R COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; type III secretion system protein complement(827099..828103) Chlamydia trachomatis RC-J/966 16429868 YP_008354310.1 CDS CTRC966_03805 NC_021898.1 828195 828302 D hypothetical protein 828195..828302 Chlamydia trachomatis RC-J/966 16429869 YP_008354311.1 CDS CTRC966_03810 NC_021898.1 828377 829159 R COG0822 NifU homolog involved in Fe-S cluster formation; hypothetical protein complement(828377..829159) Chlamydia trachomatis RC-J/966 16429870 YP_008354312.1 CDS CTRC966_03815 NC_021898.1 829156 830310 R COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase complement(829156..830310) Chlamydia trachomatis RC-J/966 16429871 YP_008354313.1 CDS CTRC966_03820 NC_021898.1 830265 830945 R COG0588 Phosphoglycerate mutase 1; phosphoglyceromutase complement(830265..830945) Chlamydia trachomatis RC-J/966 16429872 YP_008354314.1 CDS CTRC966_03825 NC_021898.1 830942 831049 R hypothetical protein complement(830942..831049) Chlamydia trachomatis RC-J/966 16429873 YP_008354315.1 CDS CTRC966_03830 NC_021898.1 831240 831965 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; ribosomal large subunit pseudouridine synthase B 831240..831965 Chlamydia trachomatis RC-J/966 16429874 YP_008354316.1 CDS CTRC966_03835 NC_021898.1 832084 832608 D hypothetical protein 832084..832608 Chlamydia trachomatis RC-J/966 16429875 YP_008354317.1 CDS CTRC966_03840 NC_021898.1 832635 833189 D COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase 832635..833189 Chlamydia trachomatis RC-J/966 16429876 YP_008354318.1 CDS CTRC966_03845 NC_021898.1 833196 834335 R COG0772 Bacterial cell division membrane protein; cell cycle protein complement(833196..834335) Chlamydia trachomatis RC-J/966 16429877 YP_008354319.1 CDS CTRC966_03850 NC_021898.1 834427 836406 R COG2217 Cation transport ATPase; cation transporting ATPase complement(834427..836406) Chlamydia trachomatis RC-J/966 16429878 YP_008354320.1 CDS CTRC966_03855 NC_021898.1 836430 837176 R COG1814 Uncharacterized membrane protein; putative integral membrane protein complement(836430..837176) Chlamydia trachomatis RC-J/966 16429879 YP_008354321.1 CDS CTRC966_03860 NC_021898.1 837213 838499 R COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase complement(837213..838499) Chlamydia trachomatis RC-J/966 16429880 YP_008354322.1 CDS CTRC966_03865 NC_021898.1 838541 839668 D COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) 838541..839668 Chlamydia trachomatis RC-J/966 16429881 YP_008354323.1 CDS CTRC966_03870 NC_021898.1 839778 841052 D COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 839778..841052 Chlamydia trachomatis RC-J/966 16429882 YP_008354324.1 CDS ribH NC_021898.1 841021 841494 D COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase 841021..841494 Chlamydia trachomatis RC-J/966 16429883 YP_008354325.1 CDS CTRC966_03880 NC_021898.1 841545 842891 R hypothetical protein complement(841545..842891) Chlamydia trachomatis RC-J/966 16429884 YP_008354326.1 CDS CTRC966_03885 NC_021898.1 843276 843941 D putative lipoprotein 843276..843941 Chlamydia trachomatis RC-J/966 16429885 YP_008354327.1 CDS CTRC966_03890 NC_021898.1 844046 845413 D COG1115 Na+/alanine symporter; Na(+)-linked D-alanine glycine permease 844046..845413 Chlamydia trachomatis RC-J/966 16429886 YP_008354328.1 CDS CTRC966_03895 NC_021898.1 845471 845923 D COG1881 Phospholipid-binding protein; hypothetical protein 845471..845923 Chlamydia trachomatis RC-J/966 16429887 YP_008354329.1 CDS CTRC966_03900 NC_021898.1 845932 846591 R COG2940 Proteins containing SET domain; SET domain containing protein complement(845932..846591) Chlamydia trachomatis RC-J/966 16429888 YP_008354330.1 CDS CTRC966_03905 NC_021898.1 846588 847376 R COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; Zn-dependent hydrolase complement(846588..847376) Chlamydia trachomatis RC-J/966 16429889 YP_008354331.1 CDS CTRC966_03910 NC_021898.1 847380 849779 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein complement(847380..849779) Chlamydia trachomatis RC-J/966 16429890 YP_008354332.1 CDS CTRC966_03920 NC_021898.1 850137 850367 R hypothetical protein complement(850137..850367) Chlamydia trachomatis RC-J/966 16429892 YP_008354333.1 CDS CTRC966_03925 NC_021898.1 856051 857346 R COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF; Na(+)-translocating NADH-quinone reductase subunit F complement(856051..857346) Chlamydia trachomatis RC-J/966 16429896 YP_008354334.1 CDS yajC NC_021898.1 857489 857833 R COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC complement(857489..857833) Chlamydia trachomatis RC-J/966 16429897 YP_008354335.1 CDS CTRC966_03935 NC_021898.1 857938 859128 R COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; rRNA methyltransferase complement(857938..859128) Chlamydia trachomatis RC-J/966 16429898 YP_008354336.1 CDS CTRC966_03940 NC_021898.1 859316 859693 R histone H1--like developmental protein complement(859316..859693) Chlamydia trachomatis RC-J/966 16429899 YP_008354337.1 CDS CTRC966_03945 NC_021898.1 860089 862557 D COG0457 FOG: TPR repeat; hypothetical protein 860089..862557 Chlamydia trachomatis RC-J/966 16429900 YP_008354338.1 CDS CTRC966_03950 NC_021898.1 862549 863823 R COG1232 Protoporphyrinogen oxidase; protoporphyrinogen oxidase complement(862549..863823) Chlamydia trachomatis RC-J/966 16429901 YP_008354339.1 CDS CTRC966_03955 NC_021898.1 863820 865193 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(863820..865193) Chlamydia trachomatis RC-J/966 16429902 YP_008354340.1 CDS hemE NC_021898.1 865166 866176 R COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase complement(865166..866176) Chlamydia trachomatis RC-J/966 16429903 YP_008354341.1 CDS CTRC966_03965 NC_021898.1 866189 869428 R COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor complement(866189..869428) Chlamydia trachomatis RC-J/966 16429904 YP_008354342.1 CDS alaS NC_021898.1 869404 872031 R COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase complement(869404..872031) Chlamydia trachomatis RC-J/966 16429905 YP_008354343.1 CDS CTRC966_03975 NC_021898.1 872181 872411 R hypothetical protein complement(872181..872411) Chlamydia trachomatis RC-J/966 16429906 YP_008354344.1 CDS CTRC966_03980 NC_021898.1 877856 879856 D COG0021 Transketolase; transketolase 877856..879856 Chlamydia trachomatis RC-J/966 16429910 YP_008354345.1 CDS CTRC966_03985 NC_021898.1 879853 880722 R COG0775 Nucleoside phosphorylase; AMP nucleosidase complement(879853..880722) Chlamydia trachomatis RC-J/966 16429911 YP_008354346.1 CDS CTRC966_03990 NC_021898.1 880774 880893 D hypothetical protein 880774..880893 Chlamydia trachomatis RC-J/966 16429912 YP_008354347.1 CDS CTRC966_03995 NC_021898.1 880942 881514 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 880942..881514 Chlamydia trachomatis RC-J/966 16429913 YP_008354348.1 CDS CTRC966_04000 NC_021898.1 881530 881754 R hypothetical protein complement(881530..881754) Chlamydia trachomatis RC-J/966 16429914 YP_008354349.1 CDS CTRC966_04005 NC_021898.1 881801 882673 R COG1409 Predicted phosphohydrolases; hypothetical protein complement(881801..882673) Chlamydia trachomatis RC-J/966 16429915 YP_008354350.1 CDS CTRC966_04010 NC_021898.1 882754 884292 R COG0459 Chaperonin GroEL (HSP60 family); 60 kDa chaperonin GroEL complement(882754..884292) Chlamydia trachomatis RC-J/966 16429916 YP_008354351.1 CDS CTRC966_04015 NC_021898.1 884740 886092 D COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 884740..886092 Chlamydia trachomatis RC-J/966 16429918 YP_008354352.1 CDS mraY NC_021898.1 886238 887248 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 886238..887248 Chlamydia trachomatis RC-J/966 16429919 YP_008354353.1 CDS murD NC_021898.1 887260 888510 D COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 887260..888510 Chlamydia trachomatis RC-J/966 16429920 YP_008354354.1 CDS CTRC966_04030 NC_021898.1 888507 889244 D COG1388 FOG: LysM repeat; muramidase 888507..889244 Chlamydia trachomatis RC-J/966 16429921 YP_008354355.1 CDS CTRC966_04035 NC_021898.1 889260 890417 D COG0772 Bacterial cell division membrane protein; cell division protein FtsW 889260..890417 Chlamydia trachomatis RC-J/966 16429922 YP_008354356.1 CDS murG NC_021898.1 890326 891384 D COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 890326..891384 Chlamydia trachomatis RC-J/966 16429923 YP_008354357.1 CDS CTRC966_04045 NC_021898.1 891389 893800 D COG0773 UDP-N-acetylmuramate-alanine ligase; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase 891389..893800 Chlamydia trachomatis RC-J/966 16429924 YP_008354358.1 CDS CTRC966_04050 NC_021898.1 893837 894256 R COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein complement(893837..894256) Chlamydia trachomatis RC-J/966 16429925 YP_008354359.1 CDS CTRC966_04055 NC_021898.1 894414 895220 R hypothetical protein complement(894414..895220) Chlamydia trachomatis RC-J/966 16429926 YP_008354360.1 CDS CTRC966_04060 NC_021898.1 895374 895706 D COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); anti-sigma F factor antagonist 895374..895706 Chlamydia trachomatis RC-J/966 16429927 YP_008354361.1 CDS miaA NC_021898.1 895710 896729 D COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 895710..896729 Chlamydia trachomatis RC-J/966 16429928 YP_008354362.1 CDS CTRC966_04070 NC_021898.1 896734 897786 R COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein complement(896734..897786) Chlamydia trachomatis RC-J/966 16429929 YP_008354363.1 CDS CTRC966_04075 NC_021898.1 897876 899558 D hypothetical protein 897876..899558 Chlamydia trachomatis RC-J/966 16429930 YP_008354364.1 CDS CTRC966_04080 NC_021898.1 900012 900371 D COG0799 Uncharacterized homolog of plant Iojap protein; hypothetical protein 900012..900371 Chlamydia trachomatis RC-J/966 16429931 YP_008354365.1 CDS CTRC966_04085 NC_021898.1 900382 901638 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II 900382..901638 Chlamydia trachomatis RC-J/966 16429932 YP_008354366.1 CDS CTRC966_04090 NC_021898.1 901635 902087 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 901635..902087 Chlamydia trachomatis RC-J/966 16429933 YP_008354367.1 CDS CTRC966_04095 NC_021898.1 902168 902797 R COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase complement(902168..902797) Chlamydia trachomatis RC-J/966 16429934 YP_008354368.1 CDS CTRC966_04100 NC_021898.1 902822 902938 R hypothetical protein complement(902822..902938) Chlamydia trachomatis RC-J/966 16429935 YP_008354369.1 CDS CTRC966_04105 NC_021898.1 903045 904085 D COG0334 Glutamate dehydrogenase/leucine dehydrogenase; leucine dehydrogenase 903045..904085 Chlamydia trachomatis RC-J/966 16429936 YP_008354370.1 CDS CTRC966_04110 NC_021898.1 904051 905079 R COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; 3'(2'),5'-bisphosphate nucleotidase complement(904051..905079) Chlamydia trachomatis RC-J/966 16429937 YP_008354371.1 CDS CTRC966_04115 NC_021898.1 905377 906138 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 905377..906138 Chlamydia trachomatis RC-J/966 16429938 YP_008354372.1 CDS CTRC966_04120 NC_021898.1 906146 907759 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long chain fatty acid--[acyl-carrier-protein] ligase 906146..907759 Chlamydia trachomatis RC-J/966 16429939 YP_008354373.1 CDS CTRC966_04125 NC_021898.1 907802 908935 D COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase 907802..908935 Chlamydia trachomatis RC-J/966 16429940 YP_008354374.1 CDS CTRC966_04130 NC_021898.1 908854 911115 R COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA complement(908854..911115) Chlamydia trachomatis RC-J/966 16429941 YP_008354375.1 CDS CTRC966_04135 NC_021898.1 911070 911759 R hypothetical protein complement(911070..911759) Chlamydia trachomatis RC-J/966 16429942 YP_008354376.1 CDS CTRC966_04140 NC_021898.1 911915 912409 D COG0526 Thiol-disulfide isomerase and thioredoxins; protein disulfide isomerase 911915..912409 Chlamydia trachomatis RC-J/966 16429943 YP_008354377.1 CDS lysS NC_021898.1 912641 914221 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 912641..914221 Chlamydia trachomatis RC-J/966 16429944 YP_008354378.1 CDS cysS NC_021898.1 914218 915711 R COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase complement(914218..915711) Chlamydia trachomatis RC-J/966 16429945 YP_008354379.1 CDS CTRC966_04155 NC_021898.1 915776 915946 R hypothetical protein complement(915776..915946) Chlamydia trachomatis RC-J/966 16429946 YP_008354380.1 CDS CTRC966_04160 NC_021898.1 915964 917013 D COG0526 Thiol-disulfide isomerase and thioredoxins; hypothetical protein 915964..917013 Chlamydia trachomatis RC-J/966 16429947 YP_008354381.1 CDS rnpA NC_021898.1 917091 917453 R COG0594 RNase P protein component; ribonuclease P complement(917091..917453) Chlamydia trachomatis RC-J/966 16429948 YP_008354382.1 CDS rpmJ NC_021898.1 918080 918217 D COG0257 Ribosomal protein L36; 50S ribosomal protein L36 918080..918217 Chlamydia trachomatis RC-J/966 16429949 YP_008354383.1 CDS rpsN NC_021898.1 918241 918546 D COG0199 Ribosomal protein S14; 30S ribosomal protein S14 918241..918546 Chlamydia trachomatis RC-J/966 16429950 YP_008354384.1 CDS CTRC966_04180 NC_021898.1 918580 918963 R hypothetical protein complement(918580..918963) Chlamydia trachomatis RC-J/966 16429951 YP_008354385.1 CDS CTRC966_04185 NC_021898.1 918941 919132 D hypothetical protein 918941..919132 Chlamydia trachomatis RC-J/966 16429952 YP_008354386.1 CDS CTRC966_04190 NC_021898.1 919202 919453 R putative integral membrane protein complement(919202..919453) Chlamydia trachomatis RC-J/966 16429953 YP_008354387.1 CDS CTRC966_04195 NC_021898.1 919733 920227 D COG1302 Uncharacterized protein conserved in bacteria; hypothetical protein 919733..920227 Chlamydia trachomatis RC-J/966 16429954 YP_008354388.1 CDS uvrC NC_021898.1 920273 922069 R COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C complement(920273..922069) Chlamydia trachomatis RC-J/966 16429955 YP_008354389.1 CDS CTRC966_04205 NC_021898.1 922094 924556 R COG0249 Mismatch repair ATPase (MutS family); DNA mismatch repair protein MutS complement(922094..924556) Chlamydia trachomatis RC-J/966 16429956 YP_008354390.1 CDS CTRC966_04210 NC_021898.1 924619 924843 D hypothetical protein 924619..924843 Chlamydia trachomatis RC-J/966 16429957 YP_008354391.1 CDS dnaG NC_021898.1 924889 926676 D COG0358 DNA primase (bacterial type); DNA primase 924889..926676 Chlamydia trachomatis RC-J/966 16429958 YP_008354392.1 CDS CTRC966_04220 NC_021898.1 926770 927048 D hypothetical protein 926770..927048 Chlamydia trachomatis RC-J/966 16429959 YP_008354393.1 CDS CTRC966_04225 NC_021898.1 927174 927665 D hypothetical protein 927174..927665 Chlamydia trachomatis RC-J/966 16429960 YP_008354394.1 CDS CTRC966_04230 NC_021898.1 927748 930759 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase complement(927748..930759) Chlamydia trachomatis RC-J/966 16429961 YP_008354395.1 CDS CTRC966_04235 NC_021898.1 931213 931821 D COG0558 Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 931213..931821 Chlamydia trachomatis RC-J/966 16429962 YP_008354396.1 CDS glgA NC_021898.1 931828 933252 R COG0297 Glycogen synthase; glycogen synthase complement(931828..933252) Chlamydia trachomatis RC-J/966 16429963 YP_008354397.1 CDS CTRC966_04245 NC_021898.1 933829 934386 D COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc 933829..934386 Chlamydia trachomatis RC-J/966 16429965 YP_008354398.1 CDS CTRC966_04250 NC_021898.1 934394 934933 D COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 934394..934933 Chlamydia trachomatis RC-J/966 16429966 YP_008354399.1 CDS rpsF NC_021898.1 935071 935409 D COG0360 Ribosomal protein S6; 30S ribosomal protein S6 935071..935409 Chlamydia trachomatis RC-J/966 16429967 YP_008354400.1 CDS rpsR NC_021898.1 935426 935671 D COG0238 Ribosomal protein S18; 30S ribosomal protein S18 935426..935671 Chlamydia trachomatis RC-J/966 16429968 YP_008354401.1 CDS rplI NC_021898.1 935692 936195 D COG0359 Ribosomal protein L9; 50S ribosomal protein L9 935692..936195 Chlamydia trachomatis RC-J/966 16429969 YP_008354402.1 CDS CTRC966_04270 NC_021898.1 936259 937125 D COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 936259..937125 Chlamydia trachomatis RC-J/966 16429970 YP_008354403.1 CDS CTRC966_04275 NC_021898.1 937095 937298 R hypothetical protein complement(937095..937298) Chlamydia trachomatis RC-J/966 16429971 YP_008354404.1 CDS CTRC966_04280 NC_021898.1 937428 938780 R putative integral membrane protein complement(937428..938780) Chlamydia trachomatis RC-J/966 16429972 YP_008354405.1 CDS CTRC966_04285 NC_021898.1 938959 941829 R COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like; exported insulinase/protease complement(938959..941829) Chlamydia trachomatis RC-J/966 16429973 YP_008354406.1 CDS CTRC966_04290 NC_021898.1 941881 942882 R glycerol-3-phosphate acyltransferase complement(941881..942882) Chlamydia trachomatis RC-J/966 16429974 YP_008354407.1 CDS CTRC966_04295 NC_021898.1 942895 944433 R COG1530 Ribonucleases G and E; ribonuclease G complement(942895..944433) Chlamydia trachomatis RC-J/966 16429975 YP_008354408.1 CDS CTRC966_04300 NC_021898.1 944703 944915 R hypothetical protein complement(944703..944915) Chlamydia trachomatis RC-J/966 16429976 YP_008354409.1 CDS CTRC966_04305 NC_021898.1 944898 945317 D hypothetical protein 944898..945317 Chlamydia trachomatis RC-J/966 16429977 YP_008354410.1 CDS rpmF NC_021898.1 945567 945746 D COG0333 Ribosomal protein L32; 50S ribosomal protein L32 945567..945746 Chlamydia trachomatis RC-J/966 16429978 YP_008354411.1 CDS CTRC966_04315 NC_021898.1 945768 946733 D COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative glycerol-3-phosphate acyltransferase PlsX 945768..946733 Chlamydia trachomatis RC-J/966 16429979 YP_008354412.1 CDS CTRC966_04320 NC_021898.1 946953 951545 D polymorphic outer membrane protein 946953..951545 Chlamydia trachomatis RC-J/966 16429980 YP_008354413.1 CDS CTRC966_04325 NC_021898.1 951618 951731 R hypothetical protein complement(951618..951731) Chlamydia trachomatis RC-J/966 16429981 YP_008354414.1 CDS CTRC966_04330 NC_021898.1 951664 951801 R hypothetical protein complement(951664..951801) Chlamydia trachomatis RC-J/966 16429982 YP_008354415.1 CDS CTRC966_04335 NC_021898.1 951746 952540 D hypothetical protein 951746..952540 Chlamydia trachomatis RC-J/966 16429983 YP_008354416.1 CDS CTRC966_04340 NC_021898.1 952624 952923 R COG4980 Gas vesicle protein; hypothetical protein complement(952624..952923) Chlamydia trachomatis RC-J/966 16429984 YP_008354417.1 CDS CTRC966_04345 NC_021898.1 952944 953327 R COG1338 Flagellar biosynthesis pathway, component FliP; hypothetical protein complement(952944..953327) Chlamydia trachomatis RC-J/966 16429985 YP_008354418.1 CDS glmM NC_021898.1 953551 954927 D COG1109 Phosphomannomutase; phosphoglucosamine mutase 953551..954927 Chlamydia trachomatis RC-J/966 16429986 YP_008354419.1 CDS CTRC966_04355 NC_021898.1 954938 956758 D COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 954938..956758 Chlamydia trachomatis RC-J/966 16429987 YP_008354420.1 CDS CTRC966_04360 NC_021898.1 956861 958057 D COG0814 Amino acid permeases; tyrosine-specific transport protein 956861..958057 Chlamydia trachomatis RC-J/966 16429988 YP_008354421.1 CDS CTRC966_04365 NC_021898.1 958101 958229 D hypothetical protein 958101..958229 Chlamydia trachomatis RC-J/966 16429989 YP_008354422.1 CDS CTRC966_04370 NC_021898.1 958240 959433 D COG0814 Amino acid permeases; tyrosine-specific transport protein 958240..959433 Chlamydia trachomatis RC-J/966 16429990 YP_008354423.1 CDS CTRC966_04375 NC_021898.1 959475 960191 D COG0670 Integral membrane protein, interacts with FtsH; putative membrane transport protein 959475..960191 Chlamydia trachomatis RC-J/966 16429991 YP_008354424.1 CDS CTRC966_04380 NC_021898.1 960289 961143 R COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY complement(960289..961143) Chlamydia trachomatis RC-J/966 16429992 YP_008354425.1 CDS sucC NC_021898.1 961213 962373 D COG0045 Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta 961213..962373 Chlamydia trachomatis RC-J/966 16429993 YP_008354426.1 CDS CTRC966_04390 NC_021898.1 962388 963263 D COG0074 Succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 962388..963263 Chlamydia trachomatis RC-J/966 16429994 YP_008354427.1 CDS CTRC966_04395 NC_021898.1 963402 964895 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine protease 963402..964895 Chlamydia trachomatis RC-J/966 16429995 YP_008354428.1 CDS CTRC966_04400 NC_021898.1 965096 968020 D COG1026 Predicted Zn-dependent peptidases, insulinase-like; metalloprotease-insulinase 965096..968020 Chlamydia trachomatis RC-J/966 16429996 YP_008354429.1 CDS CTRC966_04405 NC_021898.1 968034 969317 R COG1322 Uncharacterized protein conserved in bacteria; DNA recombination protein complement(968034..969317) Chlamydia trachomatis RC-J/966 16429997 YP_008354430.1 CDS CTRC966_04410 NC_021898.1 969321 970112 R COG1183 Phosphatidylserine synthase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(969321..970112) Chlamydia trachomatis RC-J/966 16429998 YP_008354431.1 CDS CTRC966_04415 NC_021898.1 970747 973890 D COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha 970747..973890 Chlamydia trachomatis RC-J/966 16429999 YP_008354432.1 CDS CTRC966_04420 NC_021898.1 973928 974968 D COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 973928..974968 Chlamydia trachomatis RC-J/966 16430000 YP_008354433.1 CDS trmB NC_021898.1 975228 975902 D COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 975228..975902 Chlamydia trachomatis RC-J/966 16430001 YP_008354434.1 CDS CTRC966_04430 NC_021898.1 976018 976602 D COG0500 SAM-dependent methyltransferases; putative SAM-dependent methyltransferase 976018..976602 Chlamydia trachomatis RC-J/966 16430003 YP_008354435.1 CDS murB NC_021898.1 976599 977474 R COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(976599..977474) Chlamydia trachomatis RC-J/966 16430004 YP_008354436.1 CDS CTRC966_04440 NC_021898.1 977473 977610 D hypothetical protein 977473..977610 Chlamydia trachomatis RC-J/966 16430005 YP_008354437.1 CDS nusB NC_021898.1 977607 978113 R COG0781 Transcription termination factor; transcription antitermination protein NusB complement(977607..978113) Chlamydia trachomatis RC-J/966 16430006 YP_008354438.1 CDS infC NC_021898.1 978545 979105 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 978545..979105 Chlamydia trachomatis RC-J/966 16430007 YP_008354439.1 CDS rpmI NC_021898.1 979083 979277 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 979083..979277 Chlamydia trachomatis RC-J/966 16430008 YP_008354440.1 CDS rplT NC_021898.1 979296 979667 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 979296..979667 Chlamydia trachomatis RC-J/966 16430009 YP_008354441.1 CDS pheS NC_021898.1 979674 980702 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 979674..980702 Chlamydia trachomatis RC-J/966 16430010 YP_008354442.1 CDS CTRC966_04475 NC_021898.1 981013 982989 D hypothetical protein 981013..982989 Chlamydia trachomatis RC-J/966 16430012 YP_008354443.1 CDS CTRC966_04480 NC_021898.1 982986 984086 R COG0795 Predicted permeases; putative membrane transport protein complement(982986..984086) Chlamydia trachomatis RC-J/966 16429043 YP_008354444.1 CDS CTRC966_04485 NC_021898.1 984089 985153 R COG0795 Predicted permeases; putative membrane transport protein complement(984089..985153) Chlamydia trachomatis RC-J/966 16429044 YP_008354445.1 CDS CTRC966_04490 NC_021898.1 985251 986216 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase 985251..986216 Chlamydia trachomatis RC-J/966 16429045 YP_008354446.1 CDS CTRC966_04495 NC_021898.1 986377 989118 D COG0465 ATP-dependent Zn proteases; cell division protein 986377..989118 Chlamydia trachomatis RC-J/966 16429046 YP_008354447.1 CDS CTRC966_04500 NC_021898.1 989333 991420 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase complement(989333..991420) Chlamydia trachomatis RC-J/966 16429047 YP_008354448.1 CDS rpsO NC_021898.1 991449 991718 R COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 complement(991449..991718) Chlamydia trachomatis RC-J/966 16429048 YP_008354449.1 CDS CTRC966_04510 NC_021898.1 991944 992435 D COG0590 Cytosine/adenosine deaminases; cytosine deaminase 991944..992435 Chlamydia trachomatis RC-J/966 16429049 YP_008354450.1 CDS CTRC966_04515 NC_021898.1 992467 992685 D hypothetical protein 992467..992685 Chlamydia trachomatis RC-J/966 16429050 YP_008354451.1 CDS CTRC966_04520 NC_021898.1 992657 993361 R putative integral membrane protein complement(992657..993361) Chlamydia trachomatis RC-J/966 16429051 YP_008354452.1 CDS CTRC966_04525 NC_021898.1 993496 994014 R hypothetical protein complement(993496..994014) Chlamydia trachomatis RC-J/966 16429052 YP_008354453.1 CDS CTRC966_04530 NC_021898.1 993935 994030 D hypothetical protein 993935..994030 Chlamydia trachomatis RC-J/966 16429053 YP_008354454.1 CDS CTRC966_04535 NC_021898.1 994027 994533 R hypothetical protein complement(994027..994533) Chlamydia trachomatis RC-J/966 16429054 YP_008354455.1 CDS CTRC966_04540 NC_021898.1 994561 995040 R hypothetical protein complement(994561..995040) Chlamydia trachomatis RC-J/966 16429055 YP_008354456.1 CDS CTRC966_04545 NC_021898.1 995357 995545 D hypothetical protein 995357..995545 Chlamydia trachomatis RC-J/966 16429056 YP_008354457.1 CDS CTRC966_04550 NC_021898.1 995564 996781 D putative integral membrane protein 995564..996781 Chlamydia trachomatis RC-J/966 16429057 YP_008354458.1 CDS CTRC966_04555 NC_021898.1 996738 997613 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(996738..997613) Chlamydia trachomatis RC-J/966 16429058 YP_008354459.1 CDS CTRC966_04560 NC_021898.1 997646 998287 R COG2095 Multiple antibiotic transporter; putative integral membrane protein complement(997646..998287) Chlamydia trachomatis RC-J/966 16429059 YP_008354460.1 CDS CTRC966_04565 NC_021898.1 998304 998903 R COG2095 Multiple antibiotic transporter; putative integral membrane protein complement(998304..998903) Chlamydia trachomatis RC-J/966 16429060 YP_008354461.1 CDS CTRC966_04570 NC_021898.1 999098 1000867 R COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; ABC transporter permease complement(999098..1000867) Chlamydia trachomatis RC-J/966 16429061 YP_008354462.1 CDS CTRC966_04590 NC_021898.1 1002394 1004094 R COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate transporter complement(1002394..1004094) Chlamydia trachomatis RC-J/966 16429062 YP_008354463.1 CDS CTRC966_04595 NC_021898.1 1004852 1006117 D COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; putative membrane transport protein 1004852..1006117 Chlamydia trachomatis RC-J/966 16429063 YP_008354464.1 CDS CTRC966_04600 NC_021898.1 1006227 1008032 D COG0793 Periplasmic protease; putative exported protease 1006227..1008032 Chlamydia trachomatis RC-J/966 16429064 YP_008354465.1 CDS ispH NC_021898.1 1008127 1009050 D COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1008127..1009050 Chlamydia trachomatis RC-J/966 16429065 YP_008354466.1 CDS CTRC966_04610 NC_021898.1 1009102 1010583 R hypothetical protein complement(1009102..1010583) Chlamydia trachomatis RC-J/966 16429066 YP_008354467.1 CDS CTRC966_04615 NC_021898.1 1010595 1012115 R putative type III secretion translocator complement(1010595..1012115) Chlamydia trachomatis RC-J/966 16429067 YP_008354468.1 CDS CTRC966_04620 NC_021898.1 1012143 1012661 R COG0457 FOG: TPR repeat; type III secretion chaperone complement(1012143..1012661) Chlamydia trachomatis RC-J/966 16429068 YP_008354469.1 CDS CTRC966_04625 NC_021898.1 1012661 1014109 R hypothetical protein complement(1012661..1014109) Chlamydia trachomatis RC-J/966 16429069 YP_008354470.1 CDS CTRC966_04630 NC_021898.1 1014286 1014453 R COG1352 Methylase of chemotaxis methyl-accepting proteins; hypothetical protein complement(1014286..1014453) Chlamydia trachomatis RC-J/966 16429070 YP_008354471.1 CDS CTRC966_04640 NC_021898.1 1014667 1014972 D hypothetical protein 1014667..1014972 Chlamydia trachomatis RC-J/966 16429072 YP_008354472.1 CDS xerD NC_021898.1 1014969 1015871 R COG0582 Integrase; site-specific tyrosine recombinase XerD complement(1014969..1015871) Chlamydia trachomatis RC-J/966 16429075 YP_008354473.1 CDS CTRC966_04650 NC_021898.1 1016119 1017108 D hypothetical protein 1016119..1017108 Chlamydia trachomatis RC-J/966 16429076 YP_008354474.1 CDS CTRC966_04655 NC_021898.1 1017123 1019339 D COG0296 1,4-alpha-glucan branching enzyme; glycogen branching enzyme 1017123..1019339 Chlamydia trachomatis RC-J/966 16429077 YP_008354475.1 CDS CTRC966_04660 NC_021898.1 1019350 1020369 R hypothetical protein complement(1019350..1020369) Chlamydia trachomatis RC-J/966 16429078 YP_008354476.1 CDS CTRC966_04665 NC_021898.1 1020592 1021797 R COG5160 Protease, Ulp1 family; hypothetical protein complement(1020592..1021797) Chlamydia trachomatis RC-J/966 16429079 YP_008354477.1 CDS CTRC966_04670 NC_021898.1 1021974 1024871 R polymorphic outer membrane protein complement(1021974..1024871) Chlamydia trachomatis RC-J/966 16429080 YP_008354478.1 CDS CTRC966_04675 NC_021898.1 1024874 1027972 R polymorphic outer membrane protein complement(1024874..1027972) Chlamydia trachomatis RC-J/966 16429081 YP_008354479.1 CDS CTRC966_04680 NC_021898.1 1028137 1031175 D polymorphic outer membrane protein 1028137..1031175 Chlamydia trachomatis RC-J/966 16429082 YP_008354480.1 CDS CTRC966_04685 NC_021898.1 1031206 1034226 D polymorphic outer membrane protein 1031206..1034226 Chlamydia trachomatis RC-J/966 16429083 YP_008354481.1 CDS CTRC966_04690 NC_021898.1 1034641 1035237 D hypothetical protein 1034641..1035237 Chlamydia trachomatis RC-J/966 16429084 YP_008354482.1 CDS CTRC966_04695 NC_021898.1 1035332 1037968 R polymorphic outer membrane protein complement(1035332..1037968) Chlamydia trachomatis RC-J/966 16429085 YP_008354483.1 CDS CTRC966_04700 NC_021898.1 1037954 1038097 D hypothetical protein 1037954..1038097 Chlamydia trachomatis RC-J/966 16429086 CTRC966_t04712 tRNA CTRC966_t04712 NC_021898.1 42660 42731 R tRNA-Asn complement(42660..42731) Chlamydia trachomatis RC-J/966 16429125 CTRC966_t04714 tRNA CTRC966_t04714 NC_021898.1 69014 69088 R tRNA-Pro complement(69014..69088) Chlamydia trachomatis RC-J/966 16429151 CTRC966_t04716 tRNA CTRC966_t04716 NC_021898.1 158841 158913 D tRNA-Thr 158841..158913 Chlamydia trachomatis RC-J/966 16429237 CTRC966_t04718 tRNA CTRC966_t04718 NC_021898.1 158924 159006 D tRNA-Tyr 158924..159006 Chlamydia trachomatis RC-J/966 16429238 CTRC966_t04720 tRNA CTRC966_t04720 NC_021898.1 198532 198605 R tRNA-Ile complement(198532..198605) Chlamydia trachomatis RC-J/966 16429273 CTRC966_t04722 tRNA CTRC966_t04722 NC_021898.1 198611 198683 R tRNA-Ala complement(198611..198683) Chlamydia trachomatis RC-J/966 16429274 CTRC966_t04724 tRNA CTRC966_t04724 NC_021898.1 230475 230548 R tRNA-Met complement(230475..230548) Chlamydia trachomatis RC-J/966 16429302 CTRC966_t04726 tRNA CTRC966_t04726 NC_021898.1 230567 230639 R tRNA-Met complement(230567..230639) Chlamydia trachomatis RC-J/966 16429303 CTRC966_t04728 tRNA CTRC966_t04728 NC_021898.1 246481 246554 R tRNA-Asp complement(246481..246554) Chlamydia trachomatis RC-J/966 16429318 CTRC966_t04730 tRNA CTRC966_t04730 NC_021898.1 246562 246634 R tRNA-Val complement(246562..246634) Chlamydia trachomatis RC-J/966 16429319 CTRC966_t04732 tRNA CTRC966_t04732 NC_021898.1 358090 358162 R tRNA-Trp complement(358090..358162) Chlamydia trachomatis RC-J/966 16429421 CTRC966_t04734 tRNA CTRC966_t04734 NC_021898.1 359433 359504 R tRNA-Thr complement(359433..359504) Chlamydia trachomatis RC-J/966 16429423 CTRC966_t04736 tRNA CTRC966_t04736 NC_021898.1 364730 364802 D tRNA-Met 364730..364802 Chlamydia trachomatis RC-J/966 16429430 CTRC966_t04738 tRNA CTRC966_t04738 NC_021898.1 405578 405664 D tRNA-Ser 405578..405664 Chlamydia trachomatis RC-J/966 16429464 CTRC966_t04740 tRNA CTRC966_t04740 NC_021898.1 481591 481677 R tRNA-Ser complement(481591..481677) Chlamydia trachomatis RC-J/966 16429526 CTRC966_t04742 tRNA CTRC966_t04742 NC_021898.1 486330 486402 R tRNA-Phe complement(486330..486402) Chlamydia trachomatis RC-J/966 16429533 CTRC966_t04744 tRNA CTRC966_t04744 NC_021898.1 537405 537487 D tRNA-Leu 537405..537487 Chlamydia trachomatis RC-J/966 16429585 CTRC966_t04746 tRNA CTRC966_t04746 NC_021898.1 540204 540277 D tRNA-Arg 540204..540277 Chlamydia trachomatis RC-J/966 16429589 CTRC966_t04748 tRNA CTRC966_t04748 NC_021898.1 542331 542412 R tRNA-Leu complement(542331..542412) Chlamydia trachomatis RC-J/966 16429593 CTRC966_t04750 tRNA CTRC966_t04750 NC_021898.1 571251 571339 R tRNA-Ser complement(571251..571339) Chlamydia trachomatis RC-J/966 16429622 CTRC966_t04752 tRNA CTRC966_t04752 NC_021898.1 578342 578424 R tRNA-Leu complement(578342..578424) Chlamydia trachomatis RC-J/966 16429631 CTRC966_t04754 tRNA CTRC966_t04754 NC_021898.1 602106 602189 D tRNA-Leu 602106..602189 Chlamydia trachomatis RC-J/966 16429667 CTRC966_t04756 tRNA CTRC966_t04756 NC_021898.1 678549 678621 R tRNA-Arg complement(678549..678621) Chlamydia trachomatis RC-J/966 16429735 CTRC966_t04758 tRNA CTRC966_t04758 NC_021898.1 714645 714718 D tRNA-Pro 714645..714718 Chlamydia trachomatis RC-J/966 16429767 CTRC966_t04760 tRNA CTRC966_t04760 NC_021898.1 721778 721850 R tRNA-Ala complement(721778..721850) Chlamydia trachomatis RC-J/966 16429774 CTRC966_t04762 tRNA CTRC966_t04762 NC_021898.1 749015 749087 D tRNA-Arg 749015..749087 Chlamydia trachomatis RC-J/966 16429796 CTRC966_t04764 tRNA CTRC966_t04764 NC_021898.1 769751 769823 D tRNA-Thr 769751..769823 Chlamydia trachomatis RC-J/966 16429816 CTRC966_t04766 tRNA CTRC966_t04766 NC_021898.1 771616 771688 R tRNA-Lys complement(771616..771688) Chlamydia trachomatis RC-J/966 16429820 CTRC966_t04768 tRNA CTRC966_t04768 NC_021898.1 771705 771779 R tRNA-Glu complement(771705..771779) Chlamydia trachomatis RC-J/966 16429821 CTRC966_t04770 tRNA CTRC966_t04770 NC_021898.1 774943 775013 R tRNA-Gly complement(774943..775013) Chlamydia trachomatis RC-J/966 16429826 CTRC966_t04772 tRNA CTRC966_t04772 NC_021898.1 810903 810974 R tRNA-Gly complement(810903..810974) Chlamydia trachomatis RC-J/966 16429855 CTRC966_t04774 tRNA CTRC966_t04774 NC_021898.1 849959 850032 R tRNA-His complement(849959..850032) Chlamydia trachomatis RC-J/966 16429891 CTRC966_t04776 tRNA CTRC966_t04776 NC_021898.1 884370 884440 R tRNA-Cys complement(884370..884440) Chlamydia trachomatis RC-J/966 16429917 CTRC966_t04778 tRNA CTRC966_t04778 NC_021898.1 933481 933552 D tRNA-Gln 933481..933552 Chlamydia trachomatis RC-J/966 16429964 CTRC966_t04780 tRNA CTRC966_t04780 NC_021898.1 975893 975966 R tRNA-Val complement(975893..975966) Chlamydia trachomatis RC-J/966 16430002 CTRC966_t04782 tRNA CTRC966_t04782 NC_021898.1 980703 980787 D tRNA-Ser 980703..980787 Chlamydia trachomatis RC-J/966 16430011 CTRC966_t04784 tRNA CTRC966_t04784 NC_021898.1 1014477 1014558 D tRNA-Leu 1014477..1014558 Chlamydia trachomatis RC-J/966 16429071 CTRC966_r04790 rRNA CTRC966_r04790 NC_021898.1 850563 852114 D 16S ribosomal RNA 850563..852114 Chlamydia trachomatis RC-J/966 16429893 CTRC966_r04794 rRNA CTRC966_r04794 NC_021898.1 852357 855297 D 23S ribosomal RNA 852357..855297 Chlamydia trachomatis RC-J/966 16429894 CTRC966_r04786 rRNA CTRC966_r04786 NC_021898.1 855418 855532 D 5S ribosomal RNA 855418..855532 Chlamydia trachomatis RC-J/966 16429895 CTRC966_r04792 rRNA CTRC966_r04792 NC_021898.1 872607 874158 D 16S ribosomal RNA 872607..874158 Chlamydia trachomatis RC-J/966 16429907 CTRC966_r04796 rRNA CTRC966_r04796 NC_021898.1 874401 877341 D 23S ribosomal RNA 874401..877341 Chlamydia trachomatis RC-J/966 16429908 CTRC966_r04788 rRNA CTRC966_r04788 NC_021898.1 877462 877576 D 5S ribosomal RNA 877462..877576 Chlamydia trachomatis RC-J/966 16429909