-- dump date 20140619_035012 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_008353558.1 527327367 16429074 join(1038243..1038839,1..1176) 1 NC_021898.1 hypothetical protein 1176 16429074 CTRC966_00005 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353558.1 1038243 D 907271 CDS YP_008353559.1 527327368 16429088 complement(1321..1593) 1 NC_021898.1 COG2155 Uncharacterized conserved protein; hypothetical protein 1593 16429088 CTRC966_00010 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353559.1 1321 R 907271 CDS YP_008353560.1 527327369 16429073 1794..2096 1 NC_021898.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 2096 gatC 16429073 gatC Chlamydia trachomatis RC-J/966 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_008353560.1 1794 D 907271 CDS YP_008353561.1 527327370 16429089 2108..3583 1 NC_021898.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A 3583 gatA 16429089 gatA Chlamydia trachomatis RC-J/966 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_008353561.1 2108 D 907271 CDS YP_008353562.1 527327371 16429090 3585..5051 1 NC_021898.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B 5051 gatB 16429090 gatB Chlamydia trachomatis RC-J/966 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_008353562.1 3585 D 907271 CDS YP_008353563.1 527327372 16429091 complement(5150..6241) 1 NC_021898.1 hypothetical protein 6241 16429091 CTRC966_00030 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353563.1 5150 R 907271 CDS YP_008353564.1 527327373 16429092 complement(6369..6938) 1 NC_021898.1 hypothetical protein 6938 16429092 CTRC966_00035 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353564.1 6369 R 907271 CDS YP_008353565.1 527327374 16429093 7093..7221 1 NC_021898.1 hypothetical protein 7221 16429093 CTRC966_00040 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353565.1 7093 D 907271 CDS YP_008353566.1 527327375 16429094 7252..8202 1 NC_021898.1 hypothetical protein 8202 16429094 CTRC966_00045 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353566.1 7252 D 907271 CDS YP_008353567.1 527327376 16429095 complement(8218..9120) 1 NC_021898.1 COG1039 Ribonuclease HIII; ribonuclease HIII 9120 16429095 CTRC966_00050 Chlamydia trachomatis RC-J/966 ribonuclease HIII YP_008353567.1 8218 R 907271 CDS YP_008353568.1 527327377 16429096 9376..9807 1 NC_021898.1 COG1426 Uncharacterized protein conserved in bacteria; hypothetical protein 9807 16429096 CTRC966_00055 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353568.1 9376 D 907271 CDS YP_008353569.1 527327378 16429097 complement(9794..11161) 1 NC_021898.1 COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 11161 16429097 CTRC966_00060 Chlamydia trachomatis RC-J/966 lipid A biosynthesis lauroyl acyltransferase YP_008353569.1 9794 R 907271 CDS YP_008353570.1 527327379 16429098 complement(11293..12549) 1 NC_021898.1 hypothetical protein 12549 16429098 CTRC966_00065 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353570.1 11293 R 907271 CDS YP_008353571.1 527327380 16429099 complement(12546..13340) 1 NC_021898.1 COG1624 Uncharacterized conserved protein; putative integral membrane protein 13340 16429099 CTRC966_00070 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008353571.1 12546 R 907271 CDS YP_008353572.1 527327381 16429100 13615..14955 1 NC_021898.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome d ubiquinol oxidase subunit I 14955 16429100 CTRC966_00075 Chlamydia trachomatis RC-J/966 cytochrome d ubiquinol oxidase subunit I YP_008353572.1 13615 D 907271 CDS YP_008353573.1 527327382 16429101 14967..16028 1 NC_021898.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome d ubiquinol oxidase subunit II 16028 16429101 CTRC966_00080 Chlamydia trachomatis RC-J/966 cytochrome d ubiquinol oxidase subunit II YP_008353573.1 14967 D 907271 CDS YP_008353574.1 527327383 16429102 complement(16126..17430) 1 NC_021898.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH; hypothetical protein 17430 16429102 CTRC966_00085 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353574.1 16126 R 907271 CDS YP_008353575.1 527327384 16429103 17639..18367 1 NC_021898.1 hypothetical protein 18367 16429103 CTRC966_00090 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353575.1 17639 D 907271 CDS YP_008353576.1 527327385 16429104 18553..19854 1 NC_021898.1 COG3103 SH3 domain protein; hypothetical protein 19854 16429104 CTRC966_00095 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353576.1 18553 D 907271 CDS YP_008353577.1 527327386 16429105 complement(19916..20389) 1 NC_021898.1 hypothetical protein 20389 16429105 CTRC966_00100 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353577.1 19916 R 907271 CDS YP_008353578.1 527327387 16429106 20375..20533 1 NC_021898.1 hypothetical protein 20533 16429106 CTRC966_00105 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353578.1 20375 D 907271 CDS YP_008353579.1 527327388 16429107 21435..24545 1 NC_021898.1 COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 24545 ileS 16429107 ileS Chlamydia trachomatis RC-J/966 isoleucyl-tRNA synthetase YP_008353579.1 21435 D 907271 CDS YP_008353580.1 527327389 16429108 complement(24603..26489) 1 NC_021898.1 COG0681 Signal peptidase I; signal peptidase I 26489 16429108 CTRC966_00115 Chlamydia trachomatis RC-J/966 signal peptidase I YP_008353580.1 24603 R 907271 CDS YP_008353581.1 527327390 16429109 complement(26675..27418) 1 NC_021898.1 hypothetical protein 27418 16429109 CTRC966_00120 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353581.1 26675 R 907271 CDS YP_008353582.1 527327391 16429110 27494..27820 1 NC_021898.1 COG0254 Ribosomal protein L31; 50S ribosomal protein L31 type B 27820 rpmE2 16429110 rpmE2 Chlamydia trachomatis RC-J/966 50S ribosomal protein L31 type B YP_008353582.1 27494 D 907271 CDS YP_008353583.1 527327392 16429111 28008..29087 1 NC_021898.1 COG0216 Protein chain release factor A; peptide chain release factor 1 29087 prfA 16429111 prfA Chlamydia trachomatis RC-J/966 peptide chain release factor 1 YP_008353583.1 28008 D 907271 CDS YP_008353584.1 527327393 16429112 29071..29943 1 NC_021898.1 COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 29943 16429112 CTRC966_00135 Chlamydia trachomatis RC-J/966 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_008353584.1 29071 D 907271 CDS YP_008353585.1 527327394 16429113 29940..31286 1 NC_021898.1 COG0541 Signal recognition particle GTPase; signal recognition particle protein 31286 16429113 CTRC966_00140 Chlamydia trachomatis RC-J/966 signal recognition particle protein YP_008353585.1 29940 D 907271 CDS YP_008353586.1 527327395 16429114 31277..31627 1 NC_021898.1 COG0228 Ribosomal protein S16; 30S ribosomal protein S16 31627 rpsP 16429114 rpsP Chlamydia trachomatis RC-J/966 30S ribosomal protein S16 YP_008353586.1 31277 D 907271 CDS YP_008353587.1 527327396 16429115 31643..32701 1 NC_021898.1 COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein 32701 trmD 16429115 trmD Chlamydia trachomatis RC-J/966 tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein YP_008353587.1 31643 D 907271 CDS YP_008353588.1 527327397 16429116 32727..33092 1 NC_021898.1 COG0335 Ribosomal protein L19; 50S ribosomal protein L19 33092 rplS 16429116 rplS Chlamydia trachomatis RC-J/966 50S ribosomal protein L19 YP_008353588.1 32727 D 907271 CDS YP_008353589.1 527327398 16429117 33156..33809 1 NC_021898.1 COG0164 Ribonuclease HII; ribonuclease HII 33809 rnhB 16429117 rnhB Chlamydia trachomatis RC-J/966 ribonuclease HII YP_008353589.1 33156 D 907271 CDS YP_008353590.1 527327399 16429118 33800..34417 1 NC_021898.1 COG0194 Guanylate kinase; guanylate kinase 34417 gmk 16429118 gmk Chlamydia trachomatis RC-J/966 guanylate kinase YP_008353590.1 33800 D 907271 CDS YP_008353591.1 527327400 16429119 34410..34712 1 NC_021898.1 hypothetical protein 34712 16429119 CTRC966_00170 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353591.1 34410 D 907271 CDS YP_008353592.1 527327401 16429120 34712..36364 1 NC_021898.1 COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase 36364 16429120 CTRC966_00175 Chlamydia trachomatis RC-J/966 methionyl-tRNA synthetase YP_008353592.1 34712 D 907271 CDS YP_008353593.1 527327402 16429121 complement(36503..38743) 1 NC_021898.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; exodeoxyribonuclease V alpha chain 38743 16429121 CTRC966_00180 Chlamydia trachomatis RC-J/966 exodeoxyribonuclease V alpha chain YP_008353593.1 36503 R 907271 CDS YP_008353594.1 527327403 16429122 complement(38991..40013) 1 NC_021898.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; drug/metabolite exporter family protein 40013 16429122 CTRC966_00185 Chlamydia trachomatis RC-J/966 drug/metabolite exporter family protein YP_008353594.1 38991 R 907271 CDS YP_008353595.1 527327404 16429123 40354..41127 1 NC_021898.1 COG4285 Uncharacterized conserved protein; putative protein ligase 41127 16429123 CTRC966_00190 Chlamydia trachomatis RC-J/966 putative protein ligase YP_008353595.1 40354 D 907271 CDS YP_008353596.1 527327405 16429124 complement(41092..42249) 1 NC_021898.1 hypothetical protein 42249 16429124 CTRC966_00195 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353596.1 41092 R 907271 CDS YP_008353597.1 527327406 16429126 complement(42795..43139) 1 NC_021898.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases; hypothetical protein 43139 16429126 CTRC966_00200 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353597.1 42795 R 907271 CDS YP_008353598.1 527327407 16429127 complement(43161..43733) 1 NC_021898.1 COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase 43733 dcd 16429127 dcd Chlamydia trachomatis RC-J/966 deoxycytidine triphosphate deaminase YP_008353598.1 43161 R 907271 CDS YP_008353599.1 527327408 16429128 43820..43972 1 NC_021898.1 hypothetical protein 43972 16429128 CTRC966_00210 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353599.1 43820 D 907271 CDS YP_008353600.1 527327409 16429129 44014..45018 1 NC_021898.1 COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB 45018 ruvB 16429129 ruvB Chlamydia trachomatis RC-J/966 Holliday junction DNA helicase RuvB YP_008353600.1 44014 D 907271 CDS YP_008353601.1 527327410 16429130 45020..45832 1 NC_021898.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain; hypothetical protein 45832 16429130 CTRC966_00220 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353601.1 45020 D 907271 CDS YP_008353602.1 527327411 16429131 complement(45893..47893) 1 NC_021898.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; putative glycosyl hydrolase 47893 16429131 CTRC966_00225 Chlamydia trachomatis RC-J/966 putative glycosyl hydrolase YP_008353602.1 45893 R 907271 CDS YP_008353603.1 527327412 16429132 complement(48014..48517) 1 NC_021898.1 putative type III secretion system chaperone 48517 16429132 CTRC966_00230 Chlamydia trachomatis RC-J/966 putative type III secretion system chaperone YP_008353603.1 48014 R 907271 CDS YP_008353604.1 527327413 16429133 48983..49456 1 NC_021898.1 COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein 49456 16429133 CTRC966_00235 Chlamydia trachomatis RC-J/966 single-stranded DNA-binding protein YP_008353604.1 48983 D 907271 CDS YP_008353605.1 527327414 16429134 49443..49568 1 NC_021898.1 hypothetical protein 49568 16429134 CTRC966_00240 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353605.1 49443 D 907271 CDS YP_008353606.1 527327415 16429135 49799..51298 1 NC_021898.1 COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A 51298 16429135 CTRC966_00245 Chlamydia trachomatis RC-J/966 multifunctional aminopeptidase A YP_008353606.1 49799 D 907271 CDS YP_008353607.1 527327416 16429136 51442..52107 1 NC_021898.1 histone-like protein 2 52107 16429136 CTRC966_00250 Chlamydia trachomatis RC-J/966 histone-like protein 2 YP_008353607.1 51442 D 907271 CDS YP_008353608.1 527327417 16429137 52262..53206 1 NC_021898.1 COG1466 DNA polymerase III, delta subunit; hypothetical protein 53206 16429137 CTRC966_00255 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353608.1 52262 D 907271 CDS YP_008353609.1 527327418 16429138 53301..54014 1 NC_021898.1 COG0313 Predicted methyltransferases; hypothetical protein 54014 16429138 CTRC966_00260 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353609.1 53301 D 907271 CDS YP_008353610.1 527327419 16429139 54105..55577 1 NC_021898.1 hypothetical protein 55577 16429139 CTRC966_00265 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353610.1 54105 D 907271 CDS YP_008353611.1 527327420 16429140 55814..56338 1 NC_021898.1 hypothetical protein 56338 16429140 CTRC966_00270 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353611.1 55814 D 907271 CDS YP_008353612.1 527327421 16429141 57607..58149 1 NC_021898.1 hypothetical protein 58149 16429141 CTRC966_00275 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353612.1 57607 D 907271 CDS YP_008353613.1 527327422 16429142 complement(59091..60221) 1 NC_021898.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 60221 16429142 CTRC966_00280 Chlamydia trachomatis RC-J/966 coproporphyrinogen III oxidase YP_008353613.1 59091 R 907271 CDS YP_008353614.1 527327423 16429143 complement(60211..60657) 1 NC_021898.1 hypothetical protein 60657 16429143 CTRC966_00285 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353614.1 60211 R 907271 CDS YP_008353615.1 527327424 16429144 complement(60710..60847) 1 NC_021898.1 hypothetical protein 60847 16429144 CTRC966_00290 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353615.1 60710 R 907271 CDS YP_008353616.1 527327425 16429145 60989..63700 1 NC_021898.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; 2-oxoglutarate dehydrogenase E1 component 63700 sucA 16429145 sucA Chlamydia trachomatis RC-J/966 2-oxoglutarate dehydrogenase E1 component YP_008353616.1 60989 D 907271 CDS YP_008353617.1 527327426 16429146 63704..64801 1 NC_021898.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide succinyltransferase 64801 16429146 CTRC966_00300 Chlamydia trachomatis RC-J/966 dihydrolipoamide succinyltransferase YP_008353617.1 63704 D 907271 CDS YP_008353618.1 527327427 16429147 complement(64830..65561) 1 NC_021898.1 COG1496 Uncharacterized conserved protein; multicopper polyphenol oxidase 65561 16429147 CTRC966_00305 Chlamydia trachomatis RC-J/966 multicopper polyphenol oxidase YP_008353618.1 64830 R 907271 CDS YP_008353619.1 527327428 16429148 complement(65570..67378) 1 NC_021898.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 67378 16429148 CTRC966_00310 Chlamydia trachomatis RC-J/966 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_008353619.1 65570 R 907271 CDS YP_008353620.1 527327429 16429149 complement(67530..68621) 1 NC_021898.1 hypothetical protein 68621 16429149 CTRC966_00315 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353620.1 67530 R 907271 CDS YP_008353621.1 527327430 16429150 complement(68701..68976) 1 NC_021898.1 COG0633 Ferredoxin; ferredoxin 68976 16429150 CTRC966_00320 Chlamydia trachomatis RC-J/966 ferredoxin YP_008353621.1 68701 R 907271 CDS YP_008353622.1 527327431 16429152 69158..70975 1 NC_021898.1 COG1298 Flagellar biosynthesis pathway, component FlhA; type III secretion system protein 70975 16429152 CTRC966_00325 Chlamydia trachomatis RC-J/966 type III secretion system protein YP_008353622.1 69158 D 907271 CDS YP_008353623.1 527327432 16429153 71083..71844 1 NC_021898.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit; RNA polymerase sigma factor sigma-28 71844 16429153 CTRC966_00330 Chlamydia trachomatis RC-J/966 RNA polymerase sigma factor sigma-28 YP_008353623.1 71083 D 907271 CDS YP_008353624.1 527327433 16429154 72003..73241 1 NC_021898.1 COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 73241 16429154 CTRC966_00335 Chlamydia trachomatis RC-J/966 tyrosyl-tRNA synthetase YP_008353624.1 72003 D 907271 CDS YP_008353625.1 527327434 16429155 73251..74693 1 NC_021898.1 COG0362 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 74693 16429155 CTRC966_00340 Chlamydia trachomatis RC-J/966 6-phosphogluconate dehydrogenase YP_008353625.1 73251 D 907271 CDS YP_008353626.1 527327435 16429156 complement(74754..76562) 1 NC_021898.1 COG0481 Membrane GTPase LepA; GTP-binding protein LepA 76562 16429156 CTRC966_00345 Chlamydia trachomatis RC-J/966 GTP-binding protein LepA YP_008353626.1 74754 R 907271 CDS YP_008353627.1 527327436 16429157 complement(76748..78334) 1 NC_021898.1 COG3202 ATP/ADP translocase; ADP,ATP carrier protein 78334 16429157 CTRC966_00350 Chlamydia trachomatis RC-J/966 ADP,ATP carrier protein YP_008353627.1 76748 R 907271 CDS YP_008353628.1 527327437 16429158 78486..78638 1 NC_021898.1 hypothetical protein 78638 16429158 CTRC966_00355 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353628.1 78486 D 907271 CDS YP_008353629.1 527327438 16429159 complement(78685..79161) 1 NC_021898.1 hypothetical protein 79161 16429159 CTRC966_00360 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353629.1 78685 R 907271 CDS YP_008353630.1 527327439 16429160 79822..80802 1 NC_021898.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; ABC transport protein, solute binding component 80802 16429160 CTRC966_00365 Chlamydia trachomatis RC-J/966 ABC transport protein, solute binding component YP_008353630.1 79822 D 907271 CDS YP_008353631.1 527327440 16429161 80795..81574 1 NC_021898.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component; ABC transport protein, ATP-binding component 81574 16429161 CTRC966_00370 Chlamydia trachomatis RC-J/966 ABC transport protein, ATP-binding component YP_008353631.1 80795 D 907271 CDS YP_008353632.1 527327441 16429162 81575..82930 1 NC_021898.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; ABC transport protein, membrane permease 82930 16429162 CTRC966_00375 Chlamydia trachomatis RC-J/966 ABC transport protein, membrane permease YP_008353632.1 81575 D 907271 CDS YP_008353633.1 527327442 16429163 82920..83876 1 NC_021898.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; ABC transport protein, membrane permease 83876 16429163 CTRC966_00380 Chlamydia trachomatis RC-J/966 ABC transport protein, membrane permease YP_008353633.1 82920 D 907271 CDS YP_008353634.1 527327443 16429164 83903..85042 1 NC_021898.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 85042 16429164 CTRC966_00385 Chlamydia trachomatis RC-J/966 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_008353634.1 83903 D 907271 CDS YP_008353635.1 527327444 16429165 85238..87097 1 NC_021898.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1; putative protease 87097 16429165 CTRC966_00390 Chlamydia trachomatis RC-J/966 putative protease YP_008353635.1 85238 D 907271 CDS YP_008353636.1 527327445 16429166 complement(87044..88021) 1 NC_021898.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); exported protein 88021 16429166 CTRC966_00395 Chlamydia trachomatis RC-J/966 exported protein YP_008353636.1 87044 R 907271 CDS YP_008353637.1 527327446 16429167 complement(88179..89276) 1 NC_021898.1 COG1195 Recombinational DNA repair ATPase (RecF pathway); recombination protein F 89276 recF 16429167 recF Chlamydia trachomatis RC-J/966 recombination protein F YP_008353637.1 88179 R 907271 CDS YP_008353638.1 527327447 16429168 complement(89276..90376) 1 NC_021898.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 90376 16429168 CTRC966_00405 Chlamydia trachomatis RC-J/966 DNA polymerase III subunit beta YP_008353638.1 89276 R 907271 CDS YP_008353639.1 527327448 16429169 90656..91111 1 NC_021898.1 COG0691 tmRNA-binding protein; SsrA-binding protein 91111 smpB 16429169 smpB Chlamydia trachomatis RC-J/966 SsrA-binding protein YP_008353639.1 90656 D 907271 CDS YP_008353640.1 527327449 16429170 complement(91089..92039) 1 NC_021898.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; thiamine biosynthesis lipoprotein 92039 16429170 CTRC966_00415 Chlamydia trachomatis RC-J/966 thiamine biosynthesis lipoprotein YP_008353640.1 91089 R 907271 CDS YP_008353641.1 527327450 16429171 complement(92009..92872) 1 NC_021898.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 92872 16429171 CTRC966_00420 Chlamydia trachomatis RC-J/966 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_008353641.1 92009 R 907271 CDS YP_008353642.1 527327451 16429172 complement(92990..93385) 1 NC_021898.1 putative integral membrane protein 93385 16429172 CTRC966_00425 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008353642.1 92990 R 907271 CDS YP_008353643.1 527327452 16429173 93710..94003 1 NC_021898.1 late transcription unit B protein 94003 16429173 CTRC966_00430 Chlamydia trachomatis RC-J/966 late transcription unit B protein YP_008353643.1 93710 D 907271 CDS YP_008353644.1 527327453 16429174 94366..96048 1 NC_021898.1 hypothetical protein 96048 16429174 CTRC966_00435 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353644.1 94366 D 907271 CDS YP_008353645.1 527327454 16429175 96045..96527 1 NC_021898.1 hypothetical protein 96527 16429175 CTRC966_00440 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353645.1 96045 D 907271 CDS YP_008353646.1 527327455 16429176 complement(96541..97626) 1 NC_021898.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein 97626 16429176 CTRC966_00445 Chlamydia trachomatis RC-J/966 phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein YP_008353646.1 96541 R 907271 CDS YP_008353647.1 527327456 16429177 complement(97797..99536) 1 NC_021898.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; putative decarboxylase 99536 16429177 CTRC966_00450 Chlamydia trachomatis RC-J/966 putative decarboxylase YP_008353647.1 97797 R 907271 CDS YP_008353648.1 527327457 16429178 complement(99656..99925) 1 NC_021898.1 COG0227 Ribosomal protein L28; 50S ribosomal protein L28 99925 rpmB 16429178 rpmB Chlamydia trachomatis RC-J/966 50S ribosomal protein L28 YP_008353648.1 99656 R 907271 CDS YP_008353649.1 527327458 16429179 complement(100074..101657) 1 NC_021898.1 COG1640 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 101657 16429179 CTRC966_00460 Chlamydia trachomatis RC-J/966 4-alpha-glucanotransferase YP_008353649.1 100074 R 907271 CDS YP_008353650.1 527327459 16429180 complement(101661..102101) 1 NC_021898.1 type III secretion chaperone 102101 16429180 CTRC966_00465 Chlamydia trachomatis RC-J/966 type III secretion chaperone YP_008353650.1 101661 R 907271 CDS YP_008353651.1 527327460 16429181 complement(102139..103404) 1 NC_021898.1 low calcium response E 103404 16429181 CTRC966_00470 Chlamydia trachomatis RC-J/966 low calcium response E YP_008353651.1 102139 R 907271 CDS YP_008353652.1 527327461 16429182 complement(103422..105548) 1 NC_021898.1 COG4789 Type III secretory pathway, component EscV; low calcium response protein D (predicted to be part of the TTSS apparatus) 105548 16429182 CTRC966_00475 Chlamydia trachomatis RC-J/966 low calcium response protein D (predicted to be part of the TTSS apparatus) YP_008353652.1 103422 R 907271 CDS YP_008353653.1 527327462 16429183 complement(105548..106630) 1 NC_021898.1 COG1377 Flagellar biosynthesis pathway, component FlhB; type III secretion system protein 106630 16429183 CTRC966_00480 Chlamydia trachomatis RC-J/966 type III secretion system protein YP_008353653.1 105548 R 907271 CDS YP_008353654.1 527327463 16429184 106887..107987 1 NC_021898.1 COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF 107987 16429184 CTRC966_00485 Chlamydia trachomatis RC-J/966 GTP-binding protein YchF YP_008353654.1 106887 D 907271 CDS YP_008353655.1 527327464 16429185 complement(107996..108901) 1 NC_021898.1 COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase 108901 16429185 CTRC966_00490 Chlamydia trachomatis RC-J/966 bifunctional riboflavin kinase/FMN adenylyltransferase YP_008353655.1 107996 R 907271 CDS YP_008353656.1 527327465 16429186 complement(108858..109583) 1 NC_021898.1 COG0130 Pseudouridine synthase; tRNA pseudouridine synthase B 109583 truB 16429186 truB Chlamydia trachomatis RC-J/966 tRNA pseudouridine synthase B YP_008353656.1 108858 R 907271 CDS YP_008353657.1 527327466 16429187 complement(109621..109992) 1 NC_021898.1 COG0858 Ribosome-binding factor A; ribosome-binding factor A 109992 rbfA 16429187 rbfA Chlamydia trachomatis RC-J/966 ribosome-binding factor A YP_008353657.1 109621 R 907271 CDS YP_008353658.1 527327467 16429188 complement(109999..112689) 1 NC_021898.1 COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 112689 infB 16429188 infB Chlamydia trachomatis RC-J/966 translation initiation factor IF-2 YP_008353658.1 109999 R 907271 CDS YP_008353659.1 527327468 16429189 complement(112646..113950) 1 NC_021898.1 COG0195 Transcription elongation factor; transcription elongation factor NusA 113950 nusA 16429189 nusA Chlamydia trachomatis RC-J/966 transcription elongation factor NusA YP_008353659.1 112646 R 907271 CDS YP_008353660.1 527327469 16429190 complement(114068..115777) 1 NC_021898.1 COG0539 Ribosomal protein S1; 30S ribosomal protein S1 115777 rpsA 16429190 rpsA Chlamydia trachomatis RC-J/966 30S ribosomal protein S1 YP_008353660.1 114068 R 907271 CDS YP_008353661.1 527327470 16429191 116022..117077 1 NC_021898.1 COG0492 Thioredoxin reductase; thioredoxin reductase 117077 16429191 CTRC966_00520 Chlamydia trachomatis RC-J/966 thioredoxin reductase YP_008353661.1 116022 D 907271 CDS YP_008353662.1 527327471 16429192 117083..117442 1 NC_021898.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase 117442 acpS 16429192 acpS Chlamydia trachomatis RC-J/966 4'-phosphopantetheinyl transferase YP_008353662.1 117083 D 907271 CDS YP_008353663.1 527327472 16429193 complement(117443..117904) 1 NC_021898.1 hypothetical protein 117904 16429193 CTRC966_00530 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353663.1 117443 R 907271 CDS YP_008353664.1 527327473 16429194 118040..118501 1 NC_021898.1 hypothetical protein 118501 16429194 CTRC966_00535 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353664.1 118040 D 907271 CDS YP_008353665.1 527327474 16429195 118536..119432 1 NC_021898.1 COG0561 Predicted hydrolases of the HAD superfamily; hypothetical protein 119432 16429195 CTRC966_00540 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353665.1 118536 D 907271 CDS YP_008353666.1 527327475 16429196 complement(119422..120318) 1 NC_021898.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-(acyl carrier protein) reductase 120318 16429196 CTRC966_00545 Chlamydia trachomatis RC-J/966 enoyl-(acyl carrier protein) reductase YP_008353666.1 119422 R 907271 CDS YP_008353667.1 527327476 16429197 120630..122600 1 NC_021898.1 hypothetical protein 122600 16429197 CTRC966_00550 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353667.1 120630 D 907271 CDS YP_008353668.1 527327477 16429198 complement(122800..123624) 1 NC_021898.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; tRNA pseudouridine synthase A 123624 16429198 CTRC966_00555 Chlamydia trachomatis RC-J/966 tRNA pseudouridine synthase A YP_008353668.1 122800 R 907271 CDS YP_008353669.1 527327478 16429199 123671..124777 1 NC_021898.1 COG1194 A/G-specific DNA glycosylase; A/G-specific adenine glycosylase 124777 16429199 CTRC966_00560 Chlamydia trachomatis RC-J/966 A/G-specific adenine glycosylase YP_008353669.1 123671 D 907271 CDS YP_008353670.1 527327479 16429200 124831..125586 1 NC_021898.1 COG0327 Uncharacterized conserved protein; hypothetical protein 125586 16429200 CTRC966_00565 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353670.1 124831 D 907271 CDS YP_008353671.1 527327480 16429201 complement(125599..126387) 1 NC_021898.1 hypothetical protein 126387 16429201 CTRC966_00570 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353671.1 125599 R 907271 CDS YP_008353672.1 527327481 16429202 complement(126516..128150) 1 NC_021898.1 COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL 128150 groEL 16429202 groEL Chlamydia trachomatis RC-J/966 chaperonin GroEL YP_008353672.1 126516 R 907271 CDS YP_008353673.1 527327482 16429203 complement(128189..128497) 1 NC_021898.1 COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES 128497 groES 16429203 groES Chlamydia trachomatis RC-J/966 co-chaperonin GroES YP_008353673.1 128189 R 907271 CDS YP_008353674.1 527327483 16429204 complement(128517..128645) 1 NC_021898.1 hypothetical protein 128645 16429204 CTRC966_00585 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353674.1 128517 R 907271 CDS YP_008353675.1 527327484 16429205 complement(128669..130495) 1 NC_021898.1 COG1164 Oligoendopeptidase F; oligoendopeptidase F 130495 16429205 CTRC966_00590 Chlamydia trachomatis RC-J/966 oligoendopeptidase F YP_008353675.1 128669 R 907271 CDS YP_008353676.1 527327485 16429206 complement(130506..130619) 1 NC_021898.1 hypothetical protein 130619 16429206 CTRC966_00595 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353676.1 130506 R 907271 CDS YP_008353677.1 527327486 16429207 130797..133400 1 NC_021898.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; chaperone-protease ClpB 133400 16429207 CTRC966_00600 Chlamydia trachomatis RC-J/966 chaperone-protease ClpB YP_008353677.1 130797 D 907271 CDS YP_008353678.1 527327487 16429208 133426..134886 1 NC_021898.1 COG2912 Uncharacterized conserved protein; hypothetical protein 134886 16429208 CTRC966_00605 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353678.1 133426 D 907271 CDS YP_008353679.1 527327488 16429209 135114..135554 1 NC_021898.1 inclusion membrane protein D 135554 16429209 CTRC966_00610 Chlamydia trachomatis RC-J/966 inclusion membrane protein D YP_008353679.1 135114 D 907271 CDS YP_008353680.1 527327489 16429210 135621..136019 1 NC_021898.1 inclusion membrane protein E 136019 16429210 CTRC966_00615 Chlamydia trachomatis RC-J/966 inclusion membrane protein E YP_008353680.1 135621 D 907271 CDS YP_008353681.1 527327490 16429211 136036..136338 1 NC_021898.1 inclusion membrane protein F 136338 16429211 CTRC966_00620 Chlamydia trachomatis RC-J/966 inclusion membrane protein F YP_008353681.1 136036 D 907271 CDS YP_008353682.1 527327491 16429212 136425..136928 1 NC_021898.1 inclusion membrane protein G 136928 16429212 CTRC966_00625 Chlamydia trachomatis RC-J/966 inclusion membrane protein G YP_008353682.1 136425 D 907271 CDS YP_008353683.1 527327492 16429213 complement(137095..137916) 1 NC_021898.1 COG1196 Chromosome segregation ATPases; inclusion membrane protein A 137916 16429213 CTRC966_00630 Chlamydia trachomatis RC-J/966 inclusion membrane protein A YP_008353683.1 137095 R 907271 CDS YP_008353684.1 527327493 16429214 complement(137962..138237) 1 NC_021898.1 hypothetical protein 138237 16429214 CTRC966_00635 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353684.1 137962 R 907271 CDS YP_008353685.1 527327494 16429215 138336..139022 1 NC_021898.1 COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 139022 16429215 CTRC966_00640 Chlamydia trachomatis RC-J/966 ribulose-phosphate 3-epimerase YP_008353685.1 138336 D 907271 CDS YP_008353686.1 527327495 16429216 139009..139566 1 NC_021898.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 139566 16429216 CTRC966_00645 Chlamydia trachomatis RC-J/966 elongation factor P YP_008353686.1 139009 D 907271 CDS YP_008353687.1 527327496 16429217 139579..140073 1 NC_021898.1 COG0511 Biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 140073 16429217 CTRC966_00650 Chlamydia trachomatis RC-J/966 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_008353687.1 139579 D 907271 CDS YP_008353688.1 527327497 16429218 140077..141450 1 NC_021898.1 COG0439 Biotin carboxylase; acetyl-CoA carboxylase biotin carboxylase subunit 141450 16429218 CTRC966_00655 Chlamydia trachomatis RC-J/966 acetyl-CoA carboxylase biotin carboxylase subunit YP_008353688.1 140077 D 907271 CDS YP_008353689.1 527327498 16429219 complement(141491..141598) 1 NC_021898.1 hypothetical protein 141598 16429219 CTRC966_00660 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353689.1 141491 R 907271 CDS YP_008353690.1 527327499 16429220 141673..142125 1 NC_021898.1 COG0102 Ribosomal protein L13; 50S ribosomal protein L13 142125 rplM 16429220 rplM Chlamydia trachomatis RC-J/966 50S ribosomal protein L13 YP_008353690.1 141673 D 907271 CDS YP_008353691.1 527327500 16429221 142151..142540 1 NC_021898.1 COG0103 Ribosomal protein S9; 30S ribosomal protein S9 142540 rpsI 16429221 rpsI Chlamydia trachomatis RC-J/966 30S ribosomal protein S9 YP_008353691.1 142151 D 907271 CDS YP_008353692.1 527327501 16429222 complement(142588..143439) 1 NC_021898.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins); chitinase 143439 16429222 CTRC966_00675 Chlamydia trachomatis RC-J/966 chitinase YP_008353692.1 142588 R 907271 CDS YP_008353693.1 527327502 16429223 complement(143535..144272) 1 NC_021898.1 COG0563 Adenylate kinase and related kinases; adenylate kinase 144272 adk 16429223 adk Chlamydia trachomatis RC-J/966 adenylate kinase YP_008353693.1 143535 R 907271 CDS YP_008353694.1 527327503 16429224 144479..145123 1 NC_021898.1 COG0765 ABC-type amino acid transport system, permease component; putative ABC-membrane transport protein, inner membrane component 145123 16429224 CTRC966_00685 Chlamydia trachomatis RC-J/966 putative ABC-membrane transport protein, inner membrane component YP_008353694.1 144479 D 907271 CDS YP_008353695.1 527327504 16429225 145120..145821 1 NC_021898.1 COG1126 ABC-type polar amino acid transport system, ATPase component; ABC transporter, ATP-binding component 145821 16429225 CTRC966_00690 Chlamydia trachomatis RC-J/966 ABC transporter, ATP-binding component YP_008353695.1 145120 D 907271 CDS YP_008353696.1 527327505 16429226 complement(145824..149240) 1 NC_021898.1 hypothetical protein 149240 16429226 CTRC966_00695 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353696.1 145824 R 907271 CDS YP_008353697.1 527327506 16429227 complement(149237..150514) 1 NC_021898.1 COG1295 Predicted membrane protein; hypothetical protein 150514 16429227 CTRC966_00700 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353697.1 149237 R 907271 CDS YP_008353698.1 527327507 16429228 complement(150593..151396) 1 NC_021898.1 COG0500 SAM-dependent methyltransferases; putative methyltransferase 151396 16429228 CTRC966_00705 Chlamydia trachomatis RC-J/966 putative methyltransferase YP_008353698.1 150593 R 907271 CDS YP_008353699.1 527327508 16429229 151852..152265 1 NC_021898.1 hypothetical protein 152265 16429229 CTRC966_00710 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353699.1 151852 D 907271 CDS YP_008353700.1 527327509 16429230 152323..153405 1 NC_021898.1 hypothetical protein 153405 16429230 CTRC966_00715 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353700.1 152323 D 907271 CDS YP_008353701.1 527327510 16429231 153495..154214 1 NC_021898.1 COG0400 Predicted esterase; putative phospholipase-carboxylesterase family protein 154214 16429231 CTRC966_00720 Chlamydia trachomatis RC-J/966 putative phospholipase-carboxylesterase family protein YP_008353701.1 153495 D 907271 CDS YP_008353702.1 527327511 16429232 154233..155078 1 NC_021898.1 COG0009 Putative translation factor (SUA5); hypothetical protein 155078 16429232 CTRC966_00725 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353702.1 154233 D 907271 CDS YP_008353703.1 527327512 16429233 155056..156003 1 NC_021898.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog; microsomal dipeptidase 156003 16429233 CTRC966_00730 Chlamydia trachomatis RC-J/966 microsomal dipeptidase YP_008353703.1 155056 D 907271 CDS YP_008353704.1 527327513 16429234 complement(156000..157280) 1 NC_021898.1 COG0747 ABC-type dipeptide transport system, periplasmic component; oligopeptide transport system binding protein 157280 16429234 CTRC966_00735 Chlamydia trachomatis RC-J/966 oligopeptide transport system binding protein YP_008353704.1 156000 R 907271 CDS YP_008353705.1 527327514 16429235 157456..158142 1 NC_021898.1 COG1738 Uncharacterized conserved protein; exported protein 158142 16429235 CTRC966_00740 Chlamydia trachomatis RC-J/966 exported protein YP_008353705.1 157456 D 907271 CDS YP_008353706.1 527327515 16429236 158326..158772 1 NC_021898.1 protein translocase 158772 16429236 CTRC966_00745 Chlamydia trachomatis RC-J/966 protein translocase YP_008353706.1 158326 D 907271 CDS YP_008353707.1 527327516 16429239 159172..160029 1 NC_021898.1 hypothetical protein 160029 16429239 CTRC966_00755 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353707.1 159172 D 907271 CDS YP_008353708.1 527327517 16429240 160031..160873 1 NC_021898.1 hypothetical protein 160873 16429240 CTRC966_00760 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353708.1 160031 D 907271 CDS YP_008353709.1 527327518 16429241 160873..161739 1 NC_021898.1 hypothetical protein 161739 16429241 CTRC966_00765 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353709.1 160873 D 907271 CDS YP_008353710.1 527327519 16429242 161925..163769 1 NC_021898.1 COG0515 Serine/threonine protein kinase; serine-threonine-protein kinase 163769 16429242 CTRC966_00770 Chlamydia trachomatis RC-J/966 serine-threonine-protein kinase YP_008353710.1 161925 D 907271 CDS YP_008353711.1 527327520 16429243 163780..165771 1 NC_021898.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA 165771 ligA 16429243 ligA Chlamydia trachomatis RC-J/966 NAD-dependent DNA ligase LigA YP_008353711.1 163780 D 907271 CDS YP_008353712.1 527327521 16429244 165869..170218 1 NC_021898.1 putative integral membrane protein 170218 16429244 CTRC966_00780 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008353712.1 165869 D 907271 CDS YP_008353713.1 527327522 16429245 complement(170281..171804) 1 NC_021898.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; FAD-dependent monooxygenase 171804 16429245 CTRC966_00785 Chlamydia trachomatis RC-J/966 FAD-dependent monooxygenase YP_008353713.1 170281 R 907271 CDS YP_008353714.1 527327523 16429246 complement(172004..172951) 1 NC_021898.1 COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein 172951 16429246 CTRC966_00790 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353714.1 172004 R 907271 CDS YP_008353715.1 527327524 16429247 173350..173508 1 NC_021898.1 COG0267 Ribosomal protein L33; 50S ribosomal protein L33 173508 rpmG 16429247 rpmG Chlamydia trachomatis RC-J/966 50S ribosomal protein L33 YP_008353715.1 173350 D 907271 CDS YP_008353716.1 527327525 16429248 173544..175055 1 NC_021898.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein releasing systen, inner membrane component 175055 16429248 CTRC966_00800 Chlamydia trachomatis RC-J/966 lipoprotein releasing systen, inner membrane component YP_008353716.1 173544 D 907271 CDS YP_008353717.1 527327526 16429249 175060..175737 1 NC_021898.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component; lipoprotein release ATP-binding component 175737 16429249 CTRC966_00805 Chlamydia trachomatis RC-J/966 lipoprotein release ATP-binding component YP_008353717.1 175060 D 907271 CDS YP_008353718.1 527327527 16429250 complement(175888..178320) 1 NC_021898.1 MAC/perforin family protein 178320 16429250 CTRC966_00810 Chlamydia trachomatis RC-J/966 MAC/perforin family protein YP_008353718.1 175888 R 907271 CDS YP_008353719.1 527327528 16429251 complement(180057..180995) 1 NC_021898.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein 180995 16429251 CTRC966_00825 Chlamydia trachomatis RC-J/966 phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein YP_008353719.1 180057 R 907271 CDS YP_008353720.1 527327529 16429252 complement(181509..182714) 1 NC_021898.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein 182714 16429252 CTRC966_00830 Chlamydia trachomatis RC-J/966 phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein YP_008353720.1 181509 R 907271 CDS YP_008353721.1 527327530 16429253 complement(182837..183478) 1 NC_021898.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase D endonuclease superfamily protein 183478 16429253 CTRC966_00835 Chlamydia trachomatis RC-J/966 phospholipase D endonuclease superfamily protein YP_008353721.1 182837 R 907271 CDS YP_008353722.1 527327531 16429254 183774..183884 1 NC_021898.1 hypothetical protein 183884 16429254 CTRC966_00840 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353722.1 183774 D 907271 CDS YP_008353723.1 527327532 16429255 complement(184058..184339) 1 NC_021898.1 hypothetical protein 184339 16429255 CTRC966_00845 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353723.1 184058 R 907271 CDS YP_008353724.1 527327533 16429256 complement(184598..185068) 1 NC_021898.1 hypothetical protein 185068 16429256 CTRC966_00850 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353724.1 184598 R 907271 CDS YP_008353725.1 527327534 16429257 complement(185061..185807) 1 NC_021898.1 hypothetical protein 185807 16429257 CTRC966_00855 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353725.1 185061 R 907271 CDS YP_008353726.1 527327535 16429258 complement(185940..186188) 1 NC_021898.1 hypothetical protein 186188 16429258 CTRC966_00860 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353726.1 185940 R 907271 CDS YP_008353727.1 527327536 16429259 186418..187947 1 NC_021898.1 hypothetical protein 187947 16429259 CTRC966_00865 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353727.1 186418 D 907271 CDS YP_008353728.1 527327537 16429260 189162..189446 1 NC_021898.1 COG2973 Trp operon repressor; Trp operon repressor 189446 16429260 CTRC966_00880 Chlamydia trachomatis RC-J/966 Trp operon repressor YP_008353728.1 189162 D 907271 CDS YP_008353729.1 527327538 16429261 189487..189666 1 NC_021898.1 hypothetical protein 189666 16429261 CTRC966_00885 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353729.1 189487 D 907271 CDS YP_008353730.1 527327539 16429262 189795..190973 1 NC_021898.1 COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta 190973 16429262 CTRC966_00890 Chlamydia trachomatis RC-J/966 tryptophan synthase subunit beta YP_008353730.1 189795 D 907271 CDS YP_008353731.1 527327540 16429263 190966..191727 1 NC_021898.1 COG0159 Tryptophan synthase alpha chain; tryptophan synthase alpha chain 191727 16429263 CTRC966_00895 Chlamydia trachomatis RC-J/966 tryptophan synthase alpha chain YP_008353731.1 190966 D 907271 CDS YP_008353732.1 527327541 16429264 complement(191918..192439) 1 NC_021898.1 hypothetical protein 192439 16429264 CTRC966_00900 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353732.1 191918 R 907271 CDS YP_008353733.1 527327542 16429265 complement(192516..192761) 1 NC_021898.1 hypothetical protein 192761 16429265 CTRC966_00905 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353733.1 192516 R 907271 CDS YP_008353734.1 527327543 16429266 complement(192746..192853) 1 NC_021898.1 hypothetical protein 192853 16429266 CTRC966_00910 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353734.1 192746 R 907271 CDS YP_008353735.1 527327544 16429267 193048..194637 1 NC_021898.1 COG4166 ABC-type oligopeptide transport system, periplasmic component; oligopeptide transport system binding protein 194637 16429267 CTRC966_00915 Chlamydia trachomatis RC-J/966 oligopeptide transport system binding protein YP_008353735.1 193048 D 907271 CDS YP_008353736.1 527327545 16429268 complement(194664..195071) 1 NC_021898.1 COG1495 Disulfide bond formation protein DsbB; putative disulfide oxidoreductase 195071 16429268 CTRC966_00920 Chlamydia trachomatis RC-J/966 putative disulfide oxidoreductase YP_008353736.1 194664 R 907271 CDS YP_008353737.1 527327546 16429269 complement(195068..195784) 1 NC_021898.1 COG1651 Protein-disulfide isomerase; disulfide bond chaperone 195784 16429269 CTRC966_00925 Chlamydia trachomatis RC-J/966 disulfide bond chaperone YP_008353737.1 195068 R 907271 CDS YP_008353738.1 527327547 16429270 195930..197144 1 NC_021898.1 putative integral membrane protein 197144 16429270 CTRC966_00930 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008353738.1 195930 D 907271 CDS YP_008353739.1 527327548 16429271 complement(197146..197658) 1 NC_021898.1 hypothetical protein 197658 16429271 CTRC966_00935 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353739.1 197146 R 907271 CDS YP_008353740.1 527327549 16429272 complement(197802..198494) 1 NC_021898.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; ABC transporter, ATP-binding protein 198494 16429272 CTRC966_00940 Chlamydia trachomatis RC-J/966 ABC transporter, ATP-binding protein YP_008353740.1 197802 R 907271 CDS YP_008353741.1 527327550 16429275 complement(198802..199512) 1 NC_021898.1 hypothetical protein 199512 16429275 CTRC966_00945 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353741.1 198802 R 907271 CDS YP_008353742.1 527327551 16429276 199880..200644 1 NC_021898.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase 200644 16429276 CTRC966_00950 Chlamydia trachomatis RC-J/966 3-deoxy-manno-octulosonate cytidylyltransferase YP_008353742.1 199880 D 907271 CDS YP_008353743.1 527327552 16429277 200620..202239 1 NC_021898.1 COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase 202239 pyrG 16429277 pyrG Chlamydia trachomatis RC-J/966 CTP synthetase YP_008353743.1 200620 D 907271 CDS YP_008353744.1 527327553 16429278 202226..202672 1 NC_021898.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 202672 16429278 CTRC966_00960 Chlamydia trachomatis RC-J/966 Holliday junction resolvase-like protein YP_008353744.1 202226 D 907271 CDS YP_008353745.1 527327554 16429279 202789..204312 1 NC_021898.1 COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 204312 16429279 CTRC966_00965 Chlamydia trachomatis RC-J/966 glucose-6-phosphate 1-dehydrogenase YP_008353745.1 202789 D 907271 CDS YP_008353746.1 527327555 16429280 204337..205107 1 NC_021898.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 205107 16429280 CTRC966_00970 Chlamydia trachomatis RC-J/966 6-phosphogluconolactonase YP_008353746.1 204337 D 907271 CDS YP_008353747.1 527327556 16429281 complement(205104..205976) 1 NC_021898.1 COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 205976 16429281 CTRC966_00975 Chlamydia trachomatis RC-J/966 DNA polymerase III subunit delta' YP_008353747.1 205104 R 907271 CDS YP_008353748.1 527327557 16429282 complement(205990..206601) 1 NC_021898.1 COG0125 Thymidylate kinase; thymidylate kinase 206601 tmk 16429282 tmk Chlamydia trachomatis RC-J/966 thymidylate kinase YP_008353748.1 205990 R 907271 CDS YP_008353749.1 527327558 16429283 complement(206603..209113) 1 NC_021898.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 209113 16429283 CTRC966_00985 Chlamydia trachomatis RC-J/966 DNA gyrase subunit A YP_008353749.1 206603 R 907271 CDS YP_008353750.1 527327559 16429284 complement(209128..211542) 1 NC_021898.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 211542 gyrB 16429284 gyrB Chlamydia trachomatis RC-J/966 DNA gyrase subunit B YP_008353750.1 209128 R 907271 CDS YP_008353751.1 527327560 16429285 complement(211545..211895) 1 NC_021898.1 hypothetical protein 211895 16429285 CTRC966_00995 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353751.1 211545 R 907271 CDS YP_008353752.1 527327561 16429286 complement(212042..212737) 1 NC_021898.1 hypothetical protein 212737 16429286 CTRC966_01000 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353752.1 212042 R 907271 CDS YP_008353753.1 527327562 16429287 complement(212841..213959) 1 NC_021898.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 213959 16429287 CTRC966_01005 Chlamydia trachomatis RC-J/966 queuine tRNA-ribosyltransferase YP_008353753.1 212841 R 907271 CDS YP_008353754.1 527327563 16429288 complement(214086..215498) 1 NC_021898.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); magnesium transport protein 215498 16429288 CTRC966_01010 Chlamydia trachomatis RC-J/966 magnesium transport protein YP_008353754.1 214086 R 907271 CDS YP_008353755.1 527327564 16429289 complement(215938..217029) 1 NC_021898.1 putative integral membrane protein 217029 16429289 CTRC966_01015 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008353755.1 215938 R 907271 CDS YP_008353756.1 527327565 16429290 217255..217575 1 NC_021898.1 hypothetical protein 217575 16429290 CTRC966_01020 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353756.1 217255 D 907271 CDS YP_008353757.1 527327566 16429291 217651..218667 1 NC_021898.1 COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 218667 16429291 CTRC966_01025 Chlamydia trachomatis RC-J/966 UGMP family protein YP_008353757.1 217651 D 907271 CDS YP_008353758.1 527327567 16429292 218631..220187 1 NC_021898.1 COG4166 ABC-type oligopeptide transport system, periplasmic component; oligopeptide transport system binding protein 220187 16429292 CTRC966_01030 Chlamydia trachomatis RC-J/966 oligopeptide transport system binding protein YP_008353758.1 218631 D 907271 CDS YP_008353759.1 527327568 16429293 220346..221287 1 NC_021898.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide transport system membrane permease 221287 16429293 CTRC966_01035 Chlamydia trachomatis RC-J/966 oligopeptide transport system membrane permease YP_008353759.1 220346 D 907271 CDS YP_008353760.1 527327569 16429294 221319..222164 1 NC_021898.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide transport system membrane permease 222164 16429294 CTRC966_01040 Chlamydia trachomatis RC-J/966 oligopeptide transport system membrane permease YP_008353760.1 221319 D 907271 CDS YP_008353761.1 527327570 16429295 222157..222990 1 NC_021898.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide transport system ATP-binding protein 222990 16429295 CTRC966_01045 Chlamydia trachomatis RC-J/966 oligopeptide transport system ATP-binding protein YP_008353761.1 222157 D 907271 CDS YP_008353762.1 527327571 16429296 223005..223748 1 NC_021898.1 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide transport system ATP-binding protein 223748 16429296 CTRC966_01050 Chlamydia trachomatis RC-J/966 oligopeptide transport system ATP-binding protein YP_008353762.1 223005 D 907271 CDS YP_008353763.1 527327572 16429297 224060..224809 1 NC_021898.1 hypothetical protein 224809 16429297 CTRC966_01055 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353763.1 224060 D 907271 CDS YP_008353764.1 527327573 16429298 224839..226254 1 NC_021898.1 COG0471 Di- and tricarboxylate transporters; sodium:sulfate symporter 226254 16429298 CTRC966_01060 Chlamydia trachomatis RC-J/966 sodium:sulfate symporter YP_008353764.1 224839 D 907271 CDS YP_008353765.1 527327574 16429299 226274..227935 1 NC_021898.1 COG0205 6-phosphofructokinase; diphosphate--fructose-6-phosphate 1-phosphotransferase 227935 16429299 CTRC966_01065 Chlamydia trachomatis RC-J/966 diphosphate--fructose-6-phosphate 1-phosphotransferase YP_008353765.1 226274 D 907271 CDS YP_008353766.1 527327575 16429300 227944..228792 1 NC_021898.1 COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein 228792 16429300 CTRC966_01070 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353766.1 227944 D 907271 CDS YP_008353767.1 527327576 16429301 228774..230420 1 NC_021898.1 COG0205 6-phosphofructokinase; diphosphate--fructose-6-phosphate 1-phosphotransferase 230420 16429301 CTRC966_01075 Chlamydia trachomatis RC-J/966 diphosphate--fructose-6-phosphate 1-phosphotransferase YP_008353767.1 228774 D 907271 CDS YP_008353768.1 527327577 16429304 complement(230666..231961) 1 NC_021898.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 231961 16429304 CTRC966_01080 Chlamydia trachomatis RC-J/966 3-deoxy-D-manno-octulosonic-acid transferase YP_008353768.1 230666 R 907271 CDS YP_008353769.1 527327578 16429305 complement(231958..234417) 1 NC_021898.1 COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 234417 leuS 16429305 leuS Chlamydia trachomatis RC-J/966 leucyl-tRNA synthetase YP_008353769.1 231958 R 907271 CDS YP_008353770.1 527327579 16429306 234614..235882 1 NC_021898.1 COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 235882 16429306 CTRC966_01090 Chlamydia trachomatis RC-J/966 glutamate-1-semialdehyde aminotransferase YP_008353770.1 234614 D 907271 CDS YP_008353771.1 527327580 16429307 complement(235874..236443) 1 NC_021898.1 COG1678 Putative transcriptional regulator; hypothetical protein 236443 16429307 CTRC966_01095 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353771.1 235874 R 907271 CDS YP_008353772.1 527327581 16429308 complement(236463..236909) 1 NC_021898.1 COG1259 Uncharacterized conserved protein; hypothetical protein 236909 16429308 CTRC966_01100 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353772.1 236463 R 907271 CDS YP_008353773.1 527327582 16429309 complement(236899..237627) 1 NC_021898.1 COG0120 Ribose 5-phosphate isomerase; ribose-5-phosphate isomerase A 237627 16429309 CTRC966_01105 Chlamydia trachomatis RC-J/966 ribose-5-phosphate isomerase A YP_008353773.1 236899 R 907271 CDS YP_008353774.1 527327583 16429310 complement(237722..239365) 1 NC_021898.1 hypothetical protein 239365 16429310 CTRC966_01110 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353774.1 237722 R 907271 CDS YP_008353775.1 527327584 16429311 239669..240715 1 NC_021898.1 COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; fructose-bisphosphate aldolase 240715 16429311 CTRC966_01115 Chlamydia trachomatis RC-J/966 fructose-bisphosphate aldolase YP_008353775.1 239669 D 907271 CDS YP_008353776.1 527327585 16429312 240729..242129 1 NC_021898.1 COG0531 Amino acid transporters; glutamate/gamma-aminobutyrate antiporter 242129 16429312 CTRC966_01120 Chlamydia trachomatis RC-J/966 glutamate/gamma-aminobutyrate antiporter YP_008353776.1 240729 D 907271 CDS YP_008353777.1 527327586 16429313 242223..242987 1 NC_021898.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; hypothetical protein 242987 16429313 CTRC966_01125 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353777.1 242223 D 907271 CDS YP_008353778.1 527327587 16429314 243118..243969 1 NC_021898.1 COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 243969 surE 16429314 surE Chlamydia trachomatis RC-J/966 5'(3')-nucleotidase/polyphosphatase YP_008353778.1 243118 D 907271 CDS YP_008353779.1 527327588 16429315 244081..244989 1 NC_021898.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; prenyltransferase 244989 ubiA 16429315 ubiA Chlamydia trachomatis RC-J/966 prenyltransferase YP_008353779.1 244081 D 907271 CDS YP_008353780.1 527327589 16429316 244986..245564 1 NC_021898.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; aromatic acid decarboxylase 245564 16429316 CTRC966_01140 Chlamydia trachomatis RC-J/966 aromatic acid decarboxylase YP_008353780.1 244986 D 907271 CDS YP_008353781.1 527327590 16429317 complement(245561..246457) 1 NC_021898.1 COG1284 Uncharacterized conserved protein; hypothetical protein 246457 16429317 CTRC966_01145 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353781.1 245561 R 907271 CDS YP_008353782.1 527327591 16429320 complement(246747..246887) 1 NC_021898.1 hypothetical protein 246887 16429320 CTRC966_01150 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353782.1 246747 R 907271 CDS YP_008353783.1 527327592 16429321 complement(246914..247300) 1 NC_021898.1 hypothetical protein 247300 16429321 CTRC966_01155 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353783.1 246914 R 907271 CDS YP_008353784.1 527327593 16429322 complement(247442..248248) 1 NC_021898.1 COG0525 Valyl-tRNA synthetase; hypothetical protein 248248 16429322 CTRC966_01160 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353784.1 247442 R 907271 CDS YP_008353785.1 527327594 16429323 complement(248640..249083) 1 NC_021898.1 hypothetical protein 249083 16429323 CTRC966_01165 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353785.1 248640 R 907271 CDS YP_008353786.1 527327595 16429324 complement(249191..249559) 1 NC_021898.1 hypothetical protein 249559 16429324 CTRC966_01170 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353786.1 249191 R 907271 CDS YP_008353787.1 527327596 16429325 complement(249658..250155) 1 NC_021898.1 hypothetical protein 250155 16429325 CTRC966_01175 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353787.1 249658 R 907271 CDS YP_008353788.1 527327597 16429326 complement(250302..250703) 1 NC_021898.1 hypothetical protein 250703 16429326 CTRC966_01180 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353788.1 250302 R 907271 CDS YP_008353789.1 527327598 16429327 complement(250984..251574) 1 NC_021898.1 hypothetical protein 251574 16429327 CTRC966_01185 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353789.1 250984 R 907271 CDS YP_008353790.1 527327599 16429328 complement(251724..252371) 1 NC_021898.1 hypothetical protein 252371 16429328 CTRC966_01190 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353790.1 251724 R 907271 CDS YP_008353791.1 527327600 16429329 252597..253844 1 NC_021898.1 COG1301 Na+/H+-dicarboxylate symporters; putative sodium:dicarboxylate symport protein 253844 16429329 CTRC966_01195 Chlamydia trachomatis RC-J/966 putative sodium:dicarboxylate symport protein YP_008353791.1 252597 D 907271 CDS YP_008353792.1 527327601 16429330 254028..255500 1 NC_021898.1 COG0733 Na+-dependent transporters of the SNF family; sodium-dependent amino acid transporter 255500 16429330 CTRC966_01200 Chlamydia trachomatis RC-J/966 sodium-dependent amino acid transporter YP_008353792.1 254028 D 907271 CDS YP_008353793.1 527327602 16429331 complement(255670..255846) 1 NC_021898.1 hypothetical protein 255846 16429331 CTRC966_01205 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353793.1 255670 R 907271 CDS YP_008353794.1 527327603 16429332 256029..256565 1 NC_021898.1 inclusion membrane protein C 256565 16429332 CTRC966_01210 Chlamydia trachomatis RC-J/966 inclusion membrane protein C YP_008353794.1 256029 D 907271 CDS YP_008353795.1 527327604 16429333 256623..259409 1 NC_021898.1 putative membrane transport protein 259409 16429333 CTRC966_01215 Chlamydia trachomatis RC-J/966 putative membrane transport protein YP_008353795.1 256623 D 907271 CDS YP_008353796.1 527327605 16429334 259438..259851 1 NC_021898.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; Crp family transcriptional regulator 259851 16429334 CTRC966_01220 Chlamydia trachomatis RC-J/966 Crp family transcriptional regulator YP_008353796.1 259438 D 907271 CDS YP_008353797.1 527327606 16429335 complement(259912..260145) 1 NC_021898.1 COG0236 Acyl carrier protein; acyl carrier protein 260145 acpP 16429335 acpP Chlamydia trachomatis RC-J/966 acyl carrier protein YP_008353797.1 259912 R 907271 CDS YP_008353798.1 527327607 16429336 complement(260514..261260) 1 NC_021898.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-(acyl-carrier-protein) reductase 261260 fabG 16429336 fabG Chlamydia trachomatis RC-J/966 3-ketoacyl-(acyl-carrier-protein) reductase YP_008353798.1 260514 R 907271 CDS YP_008353799.1 527327608 16429337 complement(261257..262183) 1 NC_021898.1 COG0331 (acyl-carrier-protein) S-malonyltransferase; acyl-carrier-protein S-malonyltransferase 262183 16429337 CTRC966_01235 Chlamydia trachomatis RC-J/966 acyl-carrier-protein S-malonyltransferase YP_008353799.1 261257 R 907271 CDS YP_008353800.1 527327609 16429338 complement(262200..263183) 1 NC_021898.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-(acyl carrier protein) synthase III 263183 16429338 CTRC966_01240 Chlamydia trachomatis RC-J/966 3-oxoacyl-(acyl carrier protein) synthase III YP_008353800.1 262200 R 907271 CDS YP_008353801.1 527327610 16429339 263321..263923 1 NC_021898.1 COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 263923 recR 16429339 recR Chlamydia trachomatis RC-J/966 recombination protein RecR YP_008353801.1 263321 D 907271 CDS YP_008353802.1 527327611 16429340 264297..266675 1 NC_021898.1 COG4775 Outer membrane protein/protective antigen OMA87; outer membrane protein (variable surface antigen) 266675 16429340 CTRC966_01250 Chlamydia trachomatis RC-J/966 outer membrane protein (variable surface antigen) YP_008353802.1 264297 D 907271 CDS YP_008353803.1 527327612 16429341 266742..267263 1 NC_021898.1 COG2825 Outer membrane protein; outer membrane protein 267263 16429341 CTRC966_01255 Chlamydia trachomatis RC-J/966 outer membrane protein YP_008353803.1 266742 D 907271 CDS YP_008353804.1 527327613 16429342 267291..268355 1 NC_021898.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 268355 lpxD 16429342 lpxD Chlamydia trachomatis RC-J/966 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_008353804.1 267291 D 907271 CDS YP_008353805.1 527327614 16429343 complement(268352..269548) 1 NC_021898.1 hypothetical protein 269548 16429343 CTRC966_01265 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353805.1 268352 R 907271 CDS YP_008353806.1 527327615 16429344 269770..270792 1 NC_021898.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; pyruvate dehydrogenase E1 component alpha subunit 270792 16429344 CTRC966_01270 Chlamydia trachomatis RC-J/966 pyruvate dehydrogenase E1 component alpha subunit YP_008353806.1 269770 D 907271 CDS YP_008353807.1 527327616 16429345 270785..271771 1 NC_021898.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; pyruvate dehydrogenase E1 component beta subunit 271771 16429345 CTRC966_01275 Chlamydia trachomatis RC-J/966 pyruvate dehydrogenase E1 component beta subunit YP_008353807.1 270785 D 907271 CDS YP_008353808.1 527327617 16429346 271776..273065 1 NC_021898.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; branched-chain alpha-keto acid dehydrogenase subunit E2 273065 16429346 CTRC966_01280 Chlamydia trachomatis RC-J/966 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_008353808.1 271776 D 907271 CDS YP_008353809.1 527327618 16429347 complement(273092..275536) 1 NC_021898.1 COG0058 Glucan phosphorylase; glycogen phosphorylase 275536 16429347 CTRC966_01285 Chlamydia trachomatis RC-J/966 glycogen phosphorylase YP_008353809.1 273092 R 907271 CDS YP_008353810.1 527327619 16429348 275692..276042 1 NC_021898.1 hypothetical protein 276042 16429348 CTRC966_01290 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353810.1 275692 D 907271 CDS YP_008353811.1 527327620 16429349 complement(276096..277466) 1 NC_021898.1 COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein 277466 16429349 CTRC966_01295 Chlamydia trachomatis RC-J/966 chromosomal replication initiation protein YP_008353811.1 276096 R 907271 CDS YP_008353812.1 527327621 16429350 complement(277543..279900) 1 NC_021898.1 COG0706 Preprotein translocase subunit YidC; putative inner membrane protein translocase component YidC 279900 16429350 CTRC966_01300 Chlamydia trachomatis RC-J/966 putative inner membrane protein translocase component YidC YP_008353812.1 277543 R 907271 CDS YP_008353813.1 527327622 16429351 complement(280216..281034) 1 NC_021898.1 COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase 281034 16429351 CTRC966_01305 Chlamydia trachomatis RC-J/966 prolipoprotein diacylglyceryl transferase YP_008353813.1 280216 R 907271 CDS YP_008353814.1 527327623 16429352 281285..281932 1 NC_021898.1 putative lipoprotein 281932 16429352 CTRC966_01310 Chlamydia trachomatis RC-J/966 putative lipoprotein YP_008353814.1 281285 D 907271 CDS YP_008353815.1 527327624 16429353 281936..282706 1 NC_021898.1 COG1266 Predicted metal-dependent membrane protease; inner membrane protein 282706 16429353 CTRC966_01315 Chlamydia trachomatis RC-J/966 inner membrane protein YP_008353815.1 281936 D 907271 CDS YP_008353816.1 527327625 16429354 complement(282914..283297) 1 NC_021898.1 COG1694 Predicted pyrophosphatase; hypothetical protein 283297 16429354 CTRC966_01320 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353816.1 282914 R 907271 CDS YP_008353817.1 527327626 16429355 283486..284730 1 NC_021898.1 COG1253 Hemolysins and related proteins containing CBS domains; putative membrane transport protein 284730 16429355 CTRC966_01325 Chlamydia trachomatis RC-J/966 putative membrane transport protein YP_008353817.1 283486 D 907271 CDS YP_008353818.1 527327627 16429356 284720..285934 1 NC_021898.1 COG1253 Hemolysins and related proteins containing CBS domains; hypothetical protein 285934 16429356 CTRC966_01330 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353818.1 284720 D 907271 CDS YP_008353819.1 527327628 16429357 complement(285938..287062) 1 NC_021898.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; putative cysteine desulfurase 287062 16429357 CTRC966_01335 Chlamydia trachomatis RC-J/966 putative cysteine desulfurase YP_008353819.1 285938 R 907271 CDS YP_008353820.1 527327629 16429358 complement(287068..287814) 1 NC_021898.1 COG0631 Serine/threonine protein phosphatase; protein phosphatase 2C 287814 16429358 CTRC966_01340 Chlamydia trachomatis RC-J/966 protein phosphatase 2C YP_008353820.1 287068 R 907271 CDS YP_008353821.1 527327630 16429359 complement(287938..288030) 1 NC_021898.1 hypothetical protein 288030 16429359 CTRC966_01345 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353821.1 287938 R 907271 CDS YP_008353822.1 527327631 16429360 288133..288624 1 NC_021898.1 COG5465 Uncharacterized conserved protein; hypothetical protein 288624 16429360 CTRC966_01350 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353822.1 288133 D 907271 CDS YP_008353823.1 527327632 16429361 288633..289331 1 NC_021898.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon 289331 16429361 CTRC966_01355 Chlamydia trachomatis RC-J/966 DNA polymerase III subunit epsilon YP_008353823.1 288633 D 907271 CDS YP_008353824.1 527327633 16429362 289328..290098 1 NC_021898.1 COG2107 Predicted periplasmic solute-binding protein; hypothetical protein 290098 16429362 CTRC966_01360 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353824.1 289328 D 907271 CDS YP_008353825.1 527327634 16429363 290091..290681 1 NC_021898.1 hypothetical protein 290681 16429363 CTRC966_01365 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353825.1 290091 D 907271 CDS YP_008353826.1 527327635 16429364 complement(290702..292642) 1 NC_021898.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC transporter, ATP-binding and membrane components 292642 16429364 CTRC966_01370 Chlamydia trachomatis RC-J/966 ABC transporter, ATP-binding and membrane components YP_008353826.1 290702 R 907271 CDS YP_008353827.1 527327636 16429365 complement(292608..293582) 1 NC_021898.1 COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 293582 16429365 CTRC966_01375 Chlamydia trachomatis RC-J/966 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_008353827.1 292608 R 907271 CDS YP_008353828.1 527327637 16429366 complement(293715..294896) 1 NC_021898.1 hypothetical protein 294896 16429366 CTRC966_01380 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353828.1 293715 R 907271 CDS YP_008353829.1 527327638 16429367 complement(295014..295316) 1 NC_021898.1 COG0776 Bacterial nucleoid DNA-binding protein; integration host factor alpha-subunit 295316 16429367 CTRC966_01385 Chlamydia trachomatis RC-J/966 integration host factor alpha-subunit YP_008353829.1 295014 R 907271 CDS YP_008353830.1 527327639 16429368 complement(295536..296315) 1 NC_021898.1 COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 296315 16429368 CTRC966_01390 Chlamydia trachomatis RC-J/966 N-acetylmuramoyl-L-alanine amidase YP_008353830.1 295536 R 907271 CDS YP_008353831.1 527327640 16429369 complement(296230..297681) 1 NC_021898.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 297681 murE 16429369 murE Chlamydia trachomatis RC-J/966 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_008353831.1 296230 R 907271 CDS YP_008353832.1 527327641 16429370 complement(298004..299947) 1 NC_021898.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 299947 16429370 CTRC966_01400 Chlamydia trachomatis RC-J/966 penicillin-binding protein YP_008353832.1 298004 R 907271 CDS YP_008353833.1 527327642 16429371 complement(299934..300221) 1 NC_021898.1 hypothetical protein 300221 16429371 CTRC966_01405 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353833.1 299934 R 907271 CDS YP_008353834.1 527327643 16429372 complement(300221..301123) 1 NC_021898.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltransferase 301123 16429372 CTRC966_01410 Chlamydia trachomatis RC-J/966 16S rRNA m(4)C1402 methyltransferase YP_008353834.1 300221 R 907271 CDS YP_008353835.1 527327644 16429373 301401..301967 1 NC_021898.1 hypothetical protein 301967 16429373 CTRC966_01415 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353835.1 301401 D 907271 CDS YP_008353836.1 527327645 16429374 301974..302393 1 NC_021898.1 COG0457 FOG: TPR repeat; hypothetical protein 302393 16429374 CTRC966_01420 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353836.1 301974 D 907271 CDS YP_008353837.1 527327646 16429375 302635..304002 1 NC_021898.1 COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein 304002 dnaA 16429375 dnaA Chlamydia trachomatis RC-J/966 chromosomal replication initiation protein YP_008353837.1 302635 D 907271 CDS YP_008353838.1 527327647 16429376 304054..304638 1 NC_021898.1 COG1664 Integral membrane protein CcmA involved in cell shape determination; hypothetical protein 304638 16429376 CTRC966_01430 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353838.1 304054 D 907271 CDS YP_008353839.1 527327648 16429377 complement(304610..305269) 1 NC_021898.1 hypothetical protein 305269 16429377 CTRC966_01435 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353839.1 304610 R 907271 CDS YP_008353840.1 527327649 16429378 305271..306782 1 NC_021898.1 COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB; Na(+)-translocating NADH-quinone reductase subunit B 306782 16429378 CTRC966_01440 Chlamydia trachomatis RC-J/966 Na(+)-translocating NADH-quinone reductase subunit B YP_008353840.1 305271 D 907271 CDS YP_008353841.1 527327650 16429379 306786..307736 1 NC_021898.1 COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC; Na(+)-translocating NADH-quinone reductase subunit C 307736 16429379 CTRC966_01445 Chlamydia trachomatis RC-J/966 Na(+)-translocating NADH-quinone reductase subunit C YP_008353841.1 306786 D 907271 CDS YP_008353842.1 527327651 16429380 307726..308367 1 NC_021898.1 COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD; Na(+)-translocating NADH-quinone reductase subunit D 308367 16429380 CTRC966_01450 Chlamydia trachomatis RC-J/966 Na(+)-translocating NADH-quinone reductase subunit D YP_008353842.1 307726 D 907271 CDS YP_008353843.1 527327652 16429381 308373..309107 1 NC_021898.1 COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE; Na(+)-translocating NADH-quinone reductase subunit E 309107 16429381 CTRC966_01455 Chlamydia trachomatis RC-J/966 Na(+)-translocating NADH-quinone reductase subunit E YP_008353843.1 308373 D 907271 CDS YP_008353844.1 527327653 16429382 complement(309131..309484) 1 NC_021898.1 COG0509 Glycine cleavage system H protein (lipoate-binding); glycine cleavage system protein H 309484 16429382 CTRC966_01460 Chlamydia trachomatis RC-J/966 glycine cleavage system protein H YP_008353844.1 309131 R 907271 CDS YP_008353845.1 527327654 16429383 complement(309504..311576) 1 NC_021898.1 hypothetical protein 311576 16429383 CTRC966_01465 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353845.1 309504 R 907271 CDS YP_008353846.1 527327655 16429384 complement(311771..313195) 1 NC_021898.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase D 313195 16429384 CTRC966_01470 Chlamydia trachomatis RC-J/966 phospholipase D YP_008353846.1 311771 R 907271 CDS YP_008353847.1 527327656 16429385 complement(313201..313920) 1 NC_021898.1 COG0095 Lipoate-protein ligase A; lipoate-protein ligase A 313920 16429385 CTRC966_01475 Chlamydia trachomatis RC-J/966 lipoate-protein ligase A YP_008353847.1 313201 R 907271 CDS YP_008353848.1 527327657 16429386 314185..316749 1 NC_021898.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent Clp protease 316749 16429386 CTRC966_01480 Chlamydia trachomatis RC-J/966 ATP-dependent Clp protease YP_008353848.1 314185 D 907271 CDS YP_008353849.1 527327658 16429387 complement(316730..317806) 1 NC_021898.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA 317806 mnmA 16429387 mnmA Chlamydia trachomatis RC-J/966 tRNA-specific 2-thiouridylase MnmA YP_008353849.1 316730 R 907271 CDS YP_008353850.1 527327659 16429388 318038..319732 1 NC_021898.1 hypothetical protein 319732 16429388 CTRC966_01490 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353850.1 318038 D 907271 CDS YP_008353851.1 527327660 16429389 complement(319819..320964) 1 NC_021898.1 hypothetical protein 320964 16429389 CTRC966_01495 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353851.1 319819 R 907271 CDS YP_008353852.1 527327661 16429390 complement(321022..321699) 1 NC_021898.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS family membrane transport protein IIA subunit 321699 16429390 CTRC966_01500 Chlamydia trachomatis RC-J/966 PTS family membrane transport protein IIA subunit YP_008353852.1 321022 R 907271 CDS YP_008353853.1 527327662 16429391 complement(321702..322178) 1 NC_021898.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS-family membrane transport protein IIA component 322178 16429391 CTRC966_01505 Chlamydia trachomatis RC-J/966 PTS-family membrane transport protein IIA component YP_008353853.1 321702 R 907271 CDS YP_008353854.1 527327663 16429392 complement(322180..322617) 1 NC_021898.1 COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase 322617 dut 16429392 dut Chlamydia trachomatis RC-J/966 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_008353854.1 322180 R 907271 CDS YP_008353855.1 527327664 16429393 complement(322654..323580) 1 NC_021898.1 COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta 323580 16429393 CTRC966_01515 Chlamydia trachomatis RC-J/966 acetyl-CoA carboxylase subunit beta YP_008353855.1 322654 R 907271 CDS YP_008353856.1 527327665 16429394 complement(323651..324271) 1 NC_021898.1 COG0605 Superoxide dismutase; superoxide dismutase 324271 16429394 CTRC966_01520 Chlamydia trachomatis RC-J/966 superoxide dismutase YP_008353856.1 323651 R 907271 CDS YP_008353857.1 527327666 16429395 complement(324403..326184) 1 NC_021898.1 COG1109 Phosphomannomutase; phosphoglucomutase 326184 16429395 CTRC966_01525 Chlamydia trachomatis RC-J/966 phosphoglucomutase YP_008353857.1 324403 R 907271 CDS YP_008353858.1 527327667 16429396 complement(326336..326803) 1 NC_021898.1 hypothetical protein 326803 16429396 CTRC966_01530 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353858.1 326336 R 907271 CDS YP_008353859.1 527327668 16429397 326912..327607 1 NC_021898.1 COG0571 dsRNA-specific ribonuclease; ribonuclease III 327607 rnc 16429397 rnc Chlamydia trachomatis RC-J/966 ribonuclease III YP_008353859.1 326912 D 907271 CDS YP_008353860.1 527327669 16429398 327591..328955 1 NC_021898.1 COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 328955 16429398 CTRC966_01540 Chlamydia trachomatis RC-J/966 DNA repair protein RadA YP_008353860.1 327591 D 907271 CDS YP_008353861.1 527327670 16429399 328933..329658 1 NC_021898.1 COG0181 Porphobilinogen deaminase; porphobilinogen deaminase 329658 16429399 CTRC966_01545 Chlamydia trachomatis RC-J/966 porphobilinogen deaminase YP_008353861.1 328933 D 907271 CDS YP_008353862.1 527327671 16429400 complement(330451..333255) 1 NC_021898.1 COG0515 Serine/threonine protein kinase; serine/threonine-protein kinase 333255 pknD 16429400 pknD Chlamydia trachomatis RC-J/966 serine/threonine-protein kinase YP_008353862.1 330451 R 907271 CDS YP_008353863.1 527327672 16429401 complement(333270..336089) 1 NC_021898.1 COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase 336089 valS 16429401 valS Chlamydia trachomatis RC-J/966 valyl-tRNA synthetase YP_008353863.1 333270 R 907271 CDS YP_008353864.1 527327673 16429402 complement(336216..336731) 1 NC_021898.1 hypothetical protein 336731 16429402 CTRC966_01560 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353864.1 336216 R 907271 CDS YP_008353865.1 527327674 16429403 complement(336652..337077) 1 NC_021898.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; V-type ATP synthase subunit K 337077 16429403 CTRC966_01565 Chlamydia trachomatis RC-J/966 V-type ATP synthase subunit K YP_008353865.1 336652 R 907271 CDS YP_008353866.1 527327675 16429404 complement(337140..339089) 1 NC_021898.1 COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; V-type ATP synthase subunit I 339089 16429404 CTRC966_01570 Chlamydia trachomatis RC-J/966 V-type ATP synthase subunit I YP_008353866.1 337140 R 907271 CDS YP_008353867.1 527327676 16429405 complement(339095..339706) 1 NC_021898.1 COG1394 Archaeal/vacuolar-type H+-ATPase subunit D; V-type ATP synthase subunit D 339706 16429405 CTRC966_01575 Chlamydia trachomatis RC-J/966 V-type ATP synthase subunit D YP_008353867.1 339095 R 907271 CDS YP_008353868.1 527327677 16429406 complement(339691..341007) 1 NC_021898.1 COG1156 Archaeal/vacuolar-type H+-ATPase subunit B; V-type ATP synthase subunit B 341007 16429406 CTRC966_01580 Chlamydia trachomatis RC-J/966 V-type ATP synthase subunit B YP_008353868.1 339691 R 907271 CDS YP_008353869.1 527327678 16429407 complement(341010..342785) 1 NC_021898.1 COG1155 Archaeal/vacuolar-type H+-ATPase subunit A; V-type ATP synthase subunit A 342785 16429407 CTRC966_01585 Chlamydia trachomatis RC-J/966 V-type ATP synthase subunit A YP_008353869.1 341010 R 907271 CDS YP_008353870.1 527327679 16429408 complement(342779..343579) 1 NC_021898.1 hypothetical protein 343579 16429408 CTRC966_01590 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353870.1 342779 R 907271 CDS YP_008353871.1 527327680 16429409 complement(343746..344372) 1 NC_021898.1 COG1390 Archaeal/vacuolar-type H+-ATPase subunit E; V-type ATP synthase subunit E 344372 16429409 CTRC966_01595 Chlamydia trachomatis RC-J/966 V-type ATP synthase subunit E YP_008353871.1 343746 R 907271 CDS YP_008353872.1 527327681 16429410 344481..345191 1 NC_021898.1 hypothetical protein 345191 16429410 CTRC966_01600 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353872.1 344481 D 907271 CDS YP_008353873.1 527327682 16429411 complement(345199..345570) 1 NC_021898.1 hypothetical protein 345570 16429411 CTRC966_01605 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353873.1 345199 R 907271 CDS YP_008353874.1 527327683 16429412 complement(345615..346598) 1 NC_021898.1 COG0176 Transaldolase; transaldolase B 346598 16429412 CTRC966_01610 Chlamydia trachomatis RC-J/966 transaldolase B YP_008353874.1 345615 R 907271 CDS YP_008353875.1 527327684 16429413 complement(346710..350900) 1 NC_021898.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-directed RNA polymerase subunit beta' 350900 16429413 CTRC966_01615 Chlamydia trachomatis RC-J/966 DNA-directed RNA polymerase subunit beta' YP_008353875.1 346710 R 907271 CDS YP_008353876.1 527327685 16429414 complement(350925..354683) 1 NC_021898.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta 354683 rpoB 16429414 rpoB Chlamydia trachomatis RC-J/966 DNA-directed RNA polymerase subunit beta YP_008353876.1 350925 R 907271 CDS YP_008353877.1 527327686 16429415 complement(355044..355436) 1 NC_021898.1 COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 355436 rplL 16429415 rplL Chlamydia trachomatis RC-J/966 50S ribosomal protein L7/L12 YP_008353877.1 355044 R 907271 CDS YP_008353878.1 527327687 16429416 complement(355468..355986) 1 NC_021898.1 COG0244 Ribosomal protein L10; 50S ribosomal protein L10 355986 rplJ 16429416 rplJ Chlamydia trachomatis RC-J/966 50S ribosomal protein L10 YP_008353878.1 355468 R 907271 CDS YP_008353879.1 527327688 16429417 complement(356008..356706) 1 NC_021898.1 COG0081 Ribosomal protein L1; 50S ribosomal protein L1 356706 rplA 16429417 rplA Chlamydia trachomatis RC-J/966 50S ribosomal protein L1 YP_008353879.1 356008 R 907271 CDS YP_008353880.1 527327689 16429418 complement(356729..357154) 1 NC_021898.1 COG0080 Ribosomal protein L11; 50S ribosomal protein L11 357154 rplK 16429418 rplK Chlamydia trachomatis RC-J/966 50S ribosomal protein L11 YP_008353880.1 356729 R 907271 CDS YP_008353881.1 527327690 16429419 complement(357260..357808) 1 NC_021898.1 COG0250 Transcription antiterminator; transcription antitermination protein NusG 357808 nusG 16429419 nusG Chlamydia trachomatis RC-J/966 transcription antitermination protein NusG YP_008353881.1 357260 R 907271 CDS YP_008353882.1 527327691 16429420 complement(357812..358060) 1 NC_021898.1 COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE 358060 secE 16429420 secE Chlamydia trachomatis RC-J/966 preprotein translocase subunit SecE YP_008353882.1 357812 R 907271 CDS YP_008353883.1 527327692 16429422 complement(358203..359387) 1 NC_021898.1 COG0050 GTPases - translation elongation factors; elongation factor Tu 359387 16429422 CTRC966_01655 Chlamydia trachomatis RC-J/966 elongation factor Tu YP_008353883.1 358203 R 907271 CDS YP_008353884.1 527327693 16429424 complement(359735..359956) 1 NC_021898.1 COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 359956 infA 16429424 infA Chlamydia trachomatis RC-J/966 translation initiation factor IF-1 YP_008353884.1 359735 R 907271 CDS YP_008353885.1 527327694 16429425 360368..361279 1 NC_021898.1 hypothetical protein 361279 16429425 CTRC966_01665 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353885.1 360368 D 907271 CDS YP_008353886.1 527327695 16429426 361276..361722 1 NC_021898.1 COG2166 SufE protein probably involved in Fe-S center assembly; hypothetical protein 361722 16429426 CTRC966_01670 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353886.1 361276 D 907271 CDS YP_008353887.1 527327696 16429427 complement(361774..363546) 1 NC_021898.1 hypothetical protein 363546 16429427 CTRC966_01675 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353887.1 361774 R 907271 CDS YP_008353888.1 527327697 16429428 complement(363563..363751) 1 NC_021898.1 hypothetical protein 363751 16429428 CTRC966_01680 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353888.1 363563 R 907271 CDS YP_008353889.1 527327698 16429429 complement(363941..364123) 1 NC_021898.1 hypothetical protein 364123 16429429 CTRC966_01685 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353889.1 363941 R 907271 CDS YP_008353890.1 527327699 16429431 complement(364843..365469) 1 NC_021898.1 COG0135 Phosphoribosylanthranilate isomerase; N-(5'-phosphoribosyl)anthranilate isomerase 365469 16429431 CTRC966_01690 Chlamydia trachomatis RC-J/966 N-(5'-phosphoribosyl)anthranilate isomerase YP_008353890.1 364843 R 907271 CDS YP_008353891.1 527327700 16429432 365666..366490 1 NC_021898.1 COG0149 Triosephosphate isomerase; triosephosphate isomerase 366490 tpiA 16429432 tpiA Chlamydia trachomatis RC-J/966 triosephosphate isomerase YP_008353891.1 365666 D 907271 CDS YP_008353892.1 527327701 16429433 366504..368054 1 NC_021898.1 COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 368054 xseA 16429433 xseA Chlamydia trachomatis RC-J/966 exodeoxyribonuclease VII large subunit YP_008353892.1 366504 D 907271 CDS YP_008353893.1 527327702 16429434 368038..368256 1 NC_021898.1 COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 368256 16429434 CTRC966_01705 Chlamydia trachomatis RC-J/966 exodeoxyribonuclease VII small subunit YP_008353893.1 368038 D 907271 CDS YP_008353894.1 527327703 16429435 368263..368535 1 NC_021898.1 COG1197 Transcription-repair coupling factor (superfamily II helicase); hypothetical protein 368535 16429435 CTRC966_01710 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353894.1 368263 D 907271 CDS YP_008353895.1 527327704 16429436 368532..370454 1 NC_021898.1 COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 370454 16429436 CTRC966_01715 Chlamydia trachomatis RC-J/966 1-deoxy-D-xylulose-5-phosphate synthase YP_008353895.1 368532 D 907271 CDS YP_008353896.1 527327705 16429437 370551..372008 1 NC_021898.1 COG0469 Pyruvate kinase; pyruvate kinase 372008 16429437 CTRC966_01720 Chlamydia trachomatis RC-J/966 pyruvate kinase YP_008353896.1 370551 D 907271 CDS YP_008353897.1 527327706 16429438 372031..377391 1 NC_021898.1 COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A 377391 16429438 CTRC966_01725 Chlamydia trachomatis RC-J/966 excinuclease ABC subunit A YP_008353897.1 372031 D 907271 CDS YP_008353898.1 527327707 16429439 377609..379009 1 NC_021898.1 COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau 379009 16429439 CTRC966_01730 Chlamydia trachomatis RC-J/966 DNA polymerase III subunits gamma and tau YP_008353898.1 377609 D 907271 CDS YP_008353899.1 527327708 16429440 379002..379292 1 NC_021898.1 COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 379292 16429440 CTRC966_01735 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353899.1 379002 D 907271 CDS YP_008353900.1 527327709 16429441 complement(379302..381017) 1 NC_021898.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); phosphoenolpyruvate-protein phosphotransferase 381017 16429441 CTRC966_01740 Chlamydia trachomatis RC-J/966 phosphoenolpyruvate-protein phosphotransferase YP_008353900.1 379302 R 907271 CDS YP_008353901.1 527327710 16429442 complement(381017..381346) 1 NC_021898.1 COG1925 Phosphotransferase system, HPr-related proteins; phosphocarrier protein HPr 381346 16429442 CTRC966_01745 Chlamydia trachomatis RC-J/966 phosphocarrier protein HPr YP_008353901.1 381017 R 907271 CDS YP_008353902.1 527327711 16429443 complement(381484..381945) 1 NC_021898.1 hypothetical protein 381945 16429443 CTRC966_01750 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353902.1 381484 R 907271 CDS YP_008353903.1 527327712 16429444 complement(382002..382256) 1 NC_021898.1 putative cytoplasmic protein 382256 16429444 CTRC966_01755 Chlamydia trachomatis RC-J/966 putative cytoplasmic protein YP_008353903.1 382002 R 907271 CDS YP_008353904.1 527327713 16429445 382229..383758 1 NC_021898.1 COG0658 Predicted membrane metal-binding protein; hypothetical protein 383758 16429445 CTRC966_01760 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353904.1 382229 D 907271 CDS YP_008353905.1 527327714 16429446 complement(383830..385866) 1 NC_021898.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; 2-oxoisovalerate dehydrogenase alpha subunit 385866 16429446 CTRC966_01765 Chlamydia trachomatis RC-J/966 2-oxoisovalerate dehydrogenase alpha subunit YP_008353905.1 383830 R 907271 CDS YP_008353906.1 527327715 16429447 complement(385901..387079) 1 NC_021898.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ 387079 16429447 CTRC966_01770 Chlamydia trachomatis RC-J/966 chaperone protein DnaJ YP_008353906.1 385901 R 907271 CDS YP_008353907.1 527327716 16429448 complement(387108..387284) 1 NC_021898.1 COG0828 Ribosomal protein S21; 30S ribosomal protein S21 387284 rpsU 16429448 rpsU Chlamydia trachomatis RC-J/966 30S ribosomal protein S21 YP_008353907.1 387108 R 907271 CDS YP_008353908.1 527327717 16429449 complement(387482..388114) 1 NC_021898.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; O-sialoglycoprotein endopeptidase 388114 16429449 CTRC966_01780 Chlamydia trachomatis RC-J/966 O-sialoglycoprotein endopeptidase YP_008353908.1 387482 R 907271 CDS YP_008353909.1 527327718 16429450 388424..390883 1 NC_021898.1 COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 390883 16429450 CTRC966_01785 Chlamydia trachomatis RC-J/966 ATP-dependent protease La YP_008353909.1 388424 D 907271 CDS YP_008353910.1 527327719 16429451 390985..391350 1 NC_021898.1 hypothetical protein 391350 16429451 CTRC966_01790 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353910.1 390985 D 907271 CDS YP_008353911.1 527327720 16429452 complement(391444..391590) 1 NC_021898.1 hypothetical protein 391590 16429452 CTRC966_01795 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353911.1 391444 R 907271 CDS YP_008353912.1 527327721 16429453 391693..392607 1 NC_021898.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; ribonuclease Z 392607 16429453 CTRC966_01800 Chlamydia trachomatis RC-J/966 ribonuclease Z YP_008353912.1 391693 D 907271 CDS YP_008353913.1 527327722 16429454 392669..393616 1 NC_021898.1 COG0582 Integrase; site-specific tyrosine recombinase XerC 393616 xerC 16429454 xerC Chlamydia trachomatis RC-J/966 site-specific tyrosine recombinase XerC YP_008353913.1 392669 D 907271 CDS YP_008353914.1 527327723 16429455 393670..395259 1 NC_021898.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter, ATP-binding component 395259 16429455 CTRC966_01810 Chlamydia trachomatis RC-J/966 ABC transporter, ATP-binding component YP_008353914.1 393670 D 907271 CDS YP_008353915.1 527327724 16429456 395295..395885 1 NC_021898.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 395885 16429456 CTRC966_01815 Chlamydia trachomatis RC-J/966 Maf-like protein YP_008353915.1 395295 D 907271 CDS YP_008353916.1 527327725 16429457 395867..397567 1 NC_021898.1 COG1413 FOG: HEAT repeat; putative lipoprotein 397567 16429457 CTRC966_01820 Chlamydia trachomatis RC-J/966 putative lipoprotein YP_008353916.1 395867 D 907271 CDS YP_008353917.1 527327726 16429458 397574..399676 1 NC_021898.1 hypothetical protein 399676 16429458 CTRC966_01825 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353917.1 397574 D 907271 CDS YP_008353918.1 527327727 16429459 complement(399750..400058) 1 NC_021898.1 preprotein translocase subunit SecG 400058 secG 16429459 secG Chlamydia trachomatis RC-J/966 preprotein translocase subunit SecG YP_008353918.1 399750 R 907271 CDS YP_008353919.1 527327728 16429460 complement(400214..400759) 1 NC_021898.1 COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase 400759 def 16429460 def Chlamydia trachomatis RC-J/966 peptide deformylase YP_008353919.1 400214 R 907271 CDS YP_008353920.1 527327729 16429461 complement(401034..401867) 1 NC_021898.1 COG0030 Dimethyladenosine transferase (rRNA methylation); 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein 401867 ksgA 16429461 ksgA Chlamydia trachomatis RC-J/966 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein YP_008353920.1 401034 R 907271 CDS YP_008353921.1 527327730 16429462 complement(401883..402944) 1 NC_021898.1 hypothetical protein 402944 16429462 CTRC966_01845 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353921.1 401883 R 907271 CDS YP_008353922.1 527327731 16429463 complement(403249..405363) 1 NC_021898.1 COG1331 Highly conserved protein containing a thioredoxin domain; hypothetical protein 405363 16429463 CTRC966_01850 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353922.1 403249 R 907271 CDS YP_008353923.1 527327732 16429465 complement(405681..405935) 1 NC_021898.1 putative cytoplasmic protein 405935 16429465 CTRC966_01860 Chlamydia trachomatis RC-J/966 putative cytoplasmic protein YP_008353923.1 405681 R 907271 CDS YP_008353924.1 527327733 16429466 405934..406152 1 NC_021898.1 putative inclusion membrane protein 406152 16429466 CTRC966_01865 Chlamydia trachomatis RC-J/966 putative inclusion membrane protein YP_008353924.1 405934 D 907271 CDS YP_008353925.1 527327734 16429467 406178..406690 1 NC_021898.1 putative inner membrane protein 406690 16429467 CTRC966_01870 Chlamydia trachomatis RC-J/966 putative inner membrane protein YP_008353925.1 406178 D 907271 CDS YP_008353926.1 527327735 16429468 complement(406772..407362) 1 NC_021898.1 COG1268 Uncharacterized conserved protein; putative inner membrane protein 407362 16429468 CTRC966_01875 Chlamydia trachomatis RC-J/966 putative inner membrane protein YP_008353926.1 406772 R 907271 CDS YP_008353927.1 527327736 16429469 complement(407417..407671) 1 NC_021898.1 hypothetical protein 407671 16429469 CTRC966_01880 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353927.1 407417 R 907271 CDS YP_008353928.1 527327737 16429470 complement(407614..408240) 1 NC_021898.1 hypothetical protein 408240 16429470 CTRC966_01885 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353928.1 407614 R 907271 CDS YP_008353929.1 527327738 16429471 complement(408402..409262) 1 NC_021898.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase 409262 16429471 CTRC966_01890 Chlamydia trachomatis RC-J/966 dihydrodipicolinate synthase YP_008353929.1 408402 R 907271 CDS YP_008353930.1 527327739 16429472 complement(409272..410567) 1 NC_021898.1 COG0527 Aspartokinases; aspartate kinase 410567 16429472 CTRC966_01895 Chlamydia trachomatis RC-J/966 aspartate kinase YP_008353930.1 409272 R 907271 CDS YP_008353931.1 527327740 16429473 complement(410560..411564) 1 NC_021898.1 COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 411564 16429473 CTRC966_01900 Chlamydia trachomatis RC-J/966 aspartate-semialdehyde dehydrogenase YP_008353931.1 410560 R 907271 CDS YP_008353932.1 527327741 16429474 complement(411574..412335) 1 NC_021898.1 COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 412335 16429474 CTRC966_01905 Chlamydia trachomatis RC-J/966 dihydrodipicolinate reductase YP_008353932.1 411574 R 907271 CDS YP_008353933.1 527327742 16429475 complement(412512..414239) 1 NC_021898.1 putative integral membrane protein 414239 16429475 CTRC966_01910 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008353933.1 412512 R 907271 CDS YP_008353934.1 527327743 16429476 414409..415731 1 NC_021898.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 415731 16429476 CTRC966_01915 Chlamydia trachomatis RC-J/966 3-phosphoshikimate 1-carboxyvinyltransferase YP_008353934.1 414409 D 907271 CDS YP_008353935.1 527327744 16429477 415673..416227 1 NC_021898.1 COG0703 Shikimate kinase; shikimate kinase 416227 16429477 CTRC966_01920 Chlamydia trachomatis RC-J/966 shikimate kinase YP_008353935.1 415673 D 907271 CDS YP_008353936.1 527327745 16429478 416220..417293 1 NC_021898.1 COG0082 Chorismate synthase; chorismate synthase 417293 16429478 CTRC966_01925 Chlamydia trachomatis RC-J/966 chorismate synthase YP_008353936.1 416220 D 907271 CDS YP_008353937.1 527327746 16429479 417290..418411 1 NC_021898.1 COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 418411 aroB 16429479 aroB Chlamydia trachomatis RC-J/966 3-dehydroquinate synthase YP_008353937.1 417290 D 907271 CDS YP_008353938.1 527327747 16429480 418392..419834 1 NC_021898.1 COG0710 3-dehydroquinate dehydratase; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein 419834 aroDE 16429480 aroDE Chlamydia trachomatis RC-J/966 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein YP_008353938.1 418392 D 907271 CDS YP_008353939.1 527327748 16429481 419876..420661 1 NC_021898.1 hypothetical protein 420661 16429481 CTRC966_01940 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353939.1 419876 D 907271 CDS YP_008353940.1 527327749 16429482 420802..422130 1 NC_021898.1 hypothetical protein 422130 16429482 CTRC966_01945 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353940.1 420802 D 907271 CDS YP_008353941.1 527327750 16429483 422199..422582 1 NC_021898.1 COG1945 Uncharacterized conserved protein; hypothetical protein 422582 16429483 CTRC966_01950 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353941.1 422199 D 907271 CDS YP_008353942.1 527327751 16429484 422802..424253 1 NC_021898.1 COG0531 Amino acid transporters; arginine/ornithine antiporter 424253 16429484 CTRC966_01955 Chlamydia trachomatis RC-J/966 arginine/ornithine antiporter YP_008353942.1 422802 D 907271 CDS YP_008353943.1 527327752 16429485 424425..425483 1 NC_021898.1 COG0665 Glycine/D-amino acid oxidases (deaminating); putative oxidoreductase 425483 16429485 CTRC966_01960 Chlamydia trachomatis RC-J/966 putative oxidoreductase YP_008353943.1 424425 D 907271 CDS YP_008353944.1 527327753 16429486 complement(425525..426505) 1 NC_021898.1 COG0039 Malate/lactate dehydrogenases; malate dehydrogenase 426505 16429486 CTRC966_01965 Chlamydia trachomatis RC-J/966 malate dehydrogenase YP_008353944.1 425525 R 907271 CDS YP_008353945.1 527327754 16429487 complement(426695..426835) 1 NC_021898.1 late transcription unit A protein 426835 16429487 CTRC966_01970 Chlamydia trachomatis RC-J/966 late transcription unit A protein YP_008353945.1 426695 R 907271 CDS YP_008353946.1 527327755 16429488 complement(426950..428527) 1 NC_021898.1 COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 428527 pgi 16429488 pgi Chlamydia trachomatis RC-J/966 glucose-6-phosphate isomerase YP_008353946.1 426950 R 907271 CDS YP_008353947.1 527327756 16429489 complement(428640..429983) 1 NC_021898.1 COG2262 GTPases; putative nucleotide-binding protein 429983 16429489 CTRC966_01980 Chlamydia trachomatis RC-J/966 putative nucleotide-binding protein YP_008353947.1 428640 R 907271 CDS YP_008353948.1 527327757 16429490 complement(429996..430796) 1 NC_021898.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; metal-dependent hydrolase 430796 16429490 CTRC966_01985 Chlamydia trachomatis RC-J/966 metal-dependent hydrolase YP_008353948.1 429996 R 907271 CDS YP_008353949.1 527327758 16429491 complement(430825..431598) 1 NC_021898.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; arginine transport substrate-binding protein 431598 16429491 CTRC966_01990 Chlamydia trachomatis RC-J/966 arginine transport substrate-binding protein YP_008353949.1 430825 R 907271 CDS YP_008353950.1 527327759 16429492 complement(431667..432503) 1 NC_021898.1 COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; 3-deoxy-7-phosphoheptulonate synthase 432503 16429492 CTRC966_01995 Chlamydia trachomatis RC-J/966 3-deoxy-7-phosphoheptulonate synthase YP_008353950.1 431667 R 907271 CDS YP_008353951.1 527327760 16429493 433014..433745 1 NC_021898.1 hypothetical protein 433745 16429493 CTRC966_02000 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353951.1 433014 D 907271 CDS YP_008353952.1 527327761 16429494 complement(433756..435375) 1 NC_021898.1 COG1413 FOG: HEAT repeat; hypothetical protein 435375 16429494 CTRC966_02005 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353952.1 433756 R 907271 CDS YP_008353953.1 527327762 16429495 complement(435390..435725) 1 NC_021898.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; hypothetical protein 435725 16429495 CTRC966_02010 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353953.1 435390 R 907271 CDS YP_008353954.1 527327763 16429496 complement(435722..436591) 1 NC_021898.1 COG4286 Uncharacterized conserved protein related to MYG1 family; MYG1 protein 436591 16429496 CTRC966_02015 Chlamydia trachomatis RC-J/966 MYG1 protein YP_008353954.1 435722 R 907271 CDS YP_008353955.1 527327764 16429497 436878..438953 1 NC_021898.1 COG1611 Predicted Rossmann fold nucleotide-binding protein; hypothetical protein 438953 16429497 CTRC966_02020 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353955.1 436878 D 907271 CDS YP_008353956.1 527327765 16429498 complement(438967..439314) 1 NC_021898.1 COG1872 Uncharacterized conserved protein; hypothetical protein 439314 16429498 CTRC966_02025 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353956.1 438967 R 907271 CDS YP_008353957.1 527327766 16429499 439496..440722 1 NC_021898.1 hypothetical protein 440722 16429499 CTRC966_02030 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353957.1 439496 D 907271 CDS YP_008353958.1 527327767 16429500 440830..442014 1 NC_021898.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase; L,L-diaminopimelate aminotransferase 442014 16429500 CTRC966_02035 Chlamydia trachomatis RC-J/966 L,L-diaminopimelate aminotransferase YP_008353958.1 440830 D 907271 CDS YP_008353959.1 527327768 16429501 442022..443029 1 NC_021898.1 COG2984 ABC-type uncharacterized transport system, periplasmic component; ABC transporter substrate-binding component 443029 16429501 CTRC966_02040 Chlamydia trachomatis RC-J/966 ABC transporter substrate-binding component YP_008353959.1 442022 D 907271 CDS YP_008353960.1 527327769 16429502 complement(443038..444168) 1 NC_021898.1 hypothetical protein 444168 16429502 CTRC966_02045 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353960.1 443038 R 907271 CDS YP_008353961.1 527327770 16429503 444369..446114 1 NC_021898.1 COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase 446114 16429503 CTRC966_02050 Chlamydia trachomatis RC-J/966 prolyl-tRNA synthetase YP_008353961.1 444369 D 907271 CDS YP_008353962.1 527327771 16429504 446201..447361 1 NC_021898.1 COG1420 Transcriptional regulator of heat shock gene; heat-inducible transcription repressor 447361 hrcA 16429504 hrcA Chlamydia trachomatis RC-J/966 heat-inducible transcription repressor YP_008353962.1 446201 D 907271 CDS YP_008353963.1 527327772 16429505 447358..447930 1 NC_021898.1 COG0576 Molecular chaperone GrpE (heat shock protein); HSP-70 cofactor 447930 16429505 CTRC966_02060 Chlamydia trachomatis RC-J/966 HSP-70 cofactor YP_008353963.1 447358 D 907271 CDS YP_008353964.1 527327773 16429506 447956..449938 1 NC_021898.1 COG0443 Molecular chaperone; molecular chaperone DnaK 449938 dnaK 16429506 dnaK Chlamydia trachomatis RC-J/966 molecular chaperone DnaK YP_008353964.1 447956 D 907271 CDS YP_008353965.1 527327774 16429507 450231..452315 1 NC_021898.1 COG0557 Exoribonuclease R; exoribonuclease II 452315 16429507 CTRC966_02070 Chlamydia trachomatis RC-J/966 exoribonuclease II YP_008353965.1 450231 D 907271 CDS YP_008353966.1 527327775 16429508 452571..453335 1 NC_021898.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding; hypothetical protein 453335 16429508 CTRC966_02075 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353966.1 452571 D 907271 CDS YP_008353967.1 527327776 16429509 complement(453758..454744) 1 NC_021898.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation; carbohydrate isomerase 454744 16429509 CTRC966_02080 Chlamydia trachomatis RC-J/966 carbohydrate isomerase YP_008353967.1 453758 R 907271 CDS YP_008353968.1 527327777 16429510 complement(454776..455942) 1 NC_021898.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; branched-chain alpha-keto acid dehydrogenase subunit E2 455942 16429510 CTRC966_02085 Chlamydia trachomatis RC-J/966 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_008353968.1 454776 R 907271 CDS YP_008353969.1 527327778 16429511 455941..456042 1 NC_021898.1 hypothetical protein 456042 16429511 CTRC966_02090 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353969.1 455941 D 907271 CDS YP_008353970.1 527327779 16429512 complement(456188..457426) 1 NC_021898.1 COG1301 Na+/H+-dicarboxylate symporters; Sodium:dicarboxylate symport protein 457426 16429512 CTRC966_02095 Chlamydia trachomatis RC-J/966 Sodium:dicarboxylate symport protein YP_008353970.1 456188 R 907271 CDS YP_008353971.1 527327780 16429513 complement(457423..458532) 1 NC_021898.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 458532 lpxK 16429513 lpxK Chlamydia trachomatis RC-J/966 tetraacyldisaccharide 4'-kinase YP_008353971.1 457423 R 907271 CDS YP_008353972.1 527327781 16429514 complement(458698..459507) 1 NC_021898.1 COG0566 rRNA methylases; 23S rRNA methyltransferase 459507 16429514 CTRC966_02105 Chlamydia trachomatis RC-J/966 23S rRNA methyltransferase YP_008353972.1 458698 R 907271 CDS YP_008353973.1 527327782 16429515 complement(459495..460322) 1 NC_021898.1 COG1092 Predicted SAM-dependent methyltransferases; N6-adenine-specific DNA methylase 460322 16429515 CTRC966_02110 Chlamydia trachomatis RC-J/966 N6-adenine-specific DNA methylase YP_008353973.1 459495 R 907271 CDS YP_008353974.1 527327783 16429516 complement(460319..460918) 1 NC_021898.1 COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 460918 16429516 CTRC966_02115 Chlamydia trachomatis RC-J/966 riboflavin synthase subunit alpha YP_008353974.1 460319 R 907271 CDS YP_008353975.1 527327784 16429517 461311..461775 1 NC_021898.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains; transcriptional regulator NrdR 461775 nrdR 16429517 nrdR Chlamydia trachomatis RC-J/966 transcriptional regulator NrdR YP_008353975.1 461311 D 907271 CDS YP_008353976.1 527327785 16429518 461789..462163 1 NC_021898.1 COG1734 DnaK suppressor protein; dnaK suppressor protein 462163 16429518 CTRC966_02125 Chlamydia trachomatis RC-J/966 dnaK suppressor protein YP_008353976.1 461789 D 907271 CDS YP_008353977.1 527327786 16429519 462169..462672 1 NC_021898.1 COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase 462672 lspA 16429519 lspA Chlamydia trachomatis RC-J/966 lipoprotein signal peptidase YP_008353977.1 462169 D 907271 CDS YP_008353978.1 527327787 16429520 462774..464135 1 NC_021898.1 COG1115 Na+/alanine symporter; Sodium/alanine symporter protein 464135 16429520 CTRC966_02135 Chlamydia trachomatis RC-J/966 Sodium/alanine symporter protein YP_008353978.1 462774 D 907271 CDS YP_008353979.1 527327788 16429521 464351..465628 1 NC_021898.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; polyA polymerase 465628 16429521 CTRC966_02140 Chlamydia trachomatis RC-J/966 polyA polymerase YP_008353979.1 464351 D 907271 CDS YP_008353980.1 527327789 16429522 465689..467512 1 NC_021898.1 COG3952 Predicted membrane protein; lipid-A-disaccharide synthase 467512 lpxB 16429522 lpxB Chlamydia trachomatis RC-J/966 lipid-A-disaccharide synthase YP_008353980.1 465689 D 907271 CDS YP_008353981.1 527327790 16429523 467619..470546 1 NC_021898.1 polymorphic outer membrane protein 470546 16429523 CTRC966_02150 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008353981.1 467619 D 907271 CDS YP_008353982.1 527327791 16429524 470685..475934 1 NC_021898.1 polymorphic outer membrane protein 475934 16429524 CTRC966_02155 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008353982.1 470685 D 907271 CDS YP_008353983.1 527327792 16429525 476109..481433 1 NC_021898.1 polymorphic outer membrane protein 481433 16429525 CTRC966_02160 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008353983.1 476109 D 907271 CDS YP_008353984.1 527327793 16429527 481986..482816 1 NC_021898.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; metal transporter, metal-binding component 482816 16429527 CTRC966_02165 Chlamydia trachomatis RC-J/966 metal transporter, metal-binding component YP_008353984.1 481986 D 907271 CDS YP_008353985.1 527327794 16429528 482813..483523 1 NC_021898.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component; metal transport system ATP-binding protein 483523 16429528 CTRC966_02170 Chlamydia trachomatis RC-J/966 metal transport system ATP-binding protein YP_008353985.1 482813 D 907271 CDS YP_008353986.1 527327795 16429529 483514..484395 1 NC_021898.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; metal transporter, membrane permease component 484395 16429529 CTRC966_02175 Chlamydia trachomatis RC-J/966 metal transporter, membrane permease component YP_008353986.1 483514 D 907271 CDS YP_008353987.1 527327796 16429530 complement(484311..485318) 1 NC_021898.1 COG0536 Predicted GTPase; GTPase CgtA 485318 obgE 16429530 obgE Chlamydia trachomatis RC-J/966 GTPase CgtA YP_008353987.1 484311 R 907271 CDS YP_008353988.1 527327797 16429531 complement(485408..485659) 1 NC_021898.1 COG0211 Ribosomal protein L27; 50S ribosomal protein L27 485659 rpmA 16429531 rpmA Chlamydia trachomatis RC-J/966 50S ribosomal protein L27 YP_008353988.1 485408 R 907271 CDS YP_008353989.1 527327798 16429532 complement(485690..486013) 1 NC_021898.1 COG0261 Ribosomal protein L21; 50S ribosomal protein L21 486013 rplU 16429532 rplU Chlamydia trachomatis RC-J/966 50S ribosomal protein L21 YP_008353989.1 485690 R 907271 CDS YP_008353990.1 527327799 16429534 486563..487264 1 NC_021898.1 COG2928 Uncharacterized conserved protein; putative inner membrane protein 487264 16429534 CTRC966_02195 Chlamydia trachomatis RC-J/966 putative inner membrane protein YP_008353990.1 486563 D 907271 CDS YP_008353991.1 527327800 16429535 487449..487610 1 NC_021898.1 hypothetical protein 487610 16429535 CTRC966_02200 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353991.1 487449 D 907271 CDS YP_008353992.1 527327801 16429536 487627..487788 1 NC_021898.1 hypothetical protein 487788 16429536 CTRC966_02205 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353992.1 487627 D 907271 CDS YP_008353993.1 527327802 16429537 487801..488286 1 NC_021898.1 COG0319 Predicted metal-dependent hydrolase; hypothetical protein 488286 16429537 CTRC966_02210 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353993.1 487801 D 907271 CDS YP_008353994.1 527327803 16429538 488419..489528 1 NC_021898.1 COG1253 Hemolysins and related proteins containing CBS domains; putative cation efflux protein 489528 16429538 CTRC966_02215 Chlamydia trachomatis RC-J/966 putative cation efflux protein YP_008353994.1 488419 D 907271 CDS YP_008353995.1 527327804 16429539 489717..490067 1 NC_021898.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); anti-sigma F factor antagonist 490067 16429539 CTRC966_02220 Chlamydia trachomatis RC-J/966 anti-sigma F factor antagonist YP_008353995.1 489717 D 907271 CDS YP_008353996.1 527327805 16429540 490245..492110 1 NC_021898.1 hypothetical protein 492110 16429540 CTRC966_02225 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353996.1 490245 D 907271 CDS YP_008353997.1 527327806 16429541 492307..493416 1 NC_021898.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 493416 16429541 CTRC966_02230 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353997.1 492307 D 907271 CDS YP_008353998.1 527327807 16429542 493389..494210 1 NC_021898.1 COG1427 Predicted periplasmic solute-binding protein; hypothetical protein 494210 16429542 CTRC966_02235 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008353998.1 493389 D 907271 CDS YP_008353999.1 527327808 16429543 494146..494835 1 NC_021898.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase 494835 ubiE 16429543 ubiE Chlamydia trachomatis RC-J/966 ubiquinone/menaquinone biosynthesis methyltransferase YP_008353999.1 494146 D 907271 CDS YP_008354000.1 527327809 16429544 complement(494861..495850) 1 NC_021898.1 hypothetical protein 495850 16429544 CTRC966_02245 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354000.1 494861 R 907271 CDS YP_008354001.1 527327810 16429545 complement(495911..496738) 1 NC_021898.1 COG0253 Diaminopimelate epimerase; diaminopimelate epimerase 496738 dapF 16429545 dapF Chlamydia trachomatis RC-J/966 diaminopimelate epimerase YP_008354001.1 495911 R 907271 CDS YP_008354002.1 527327811 16429546 complement(496707..497285) 1 NC_021898.1 COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit 497285 16429546 CTRC966_02255 Chlamydia trachomatis RC-J/966 ATP-dependent Clp protease proteolytic subunit YP_008354002.1 496707 R 907271 CDS YP_008354003.1 527327812 16429547 complement(497297..498790) 1 NC_021898.1 COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 498790 16429547 CTRC966_02260 Chlamydia trachomatis RC-J/966 serine hydroxymethyltransferase YP_008354003.1 497297 R 907271 CDS YP_008354004.1 527327813 16429548 complement(499041..499148) 1 NC_021898.1 hypothetical protein 499148 16429548 CTRC966_02265 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354004.1 499041 R 907271 CDS YP_008354005.1 527327814 16429549 499154..499825 1 NC_021898.1 uroporphyrinogen-III synthase 499825 hemD 16429549 hemD Chlamydia trachomatis RC-J/966 uroporphyrinogen-III synthase YP_008354005.1 499154 D 907271 CDS YP_008354006.1 527327815 16429550 499928..500464 1 NC_021898.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 500464 ispF 16429550 ispF Chlamydia trachomatis RC-J/966 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_008354006.1 499928 D 907271 CDS YP_008354007.1 527327816 16429551 complement(500461..501513) 1 NC_021898.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein); putative oxidoreductase 501513 16429551 CTRC966_02280 Chlamydia trachomatis RC-J/966 putative oxidoreductase YP_008354007.1 500461 R 907271 CDS YP_008354008.1 527327817 16429552 complement(501530..501847) 1 NC_021898.1 COG0051 Ribosomal protein S10; 30S ribosomal protein S10 501847 rpsJ 16429552 rpsJ Chlamydia trachomatis RC-J/966 30S ribosomal protein S10 YP_008354008.1 501530 R 907271 CDS YP_008354009.1 527327818 16429553 complement(501855..503939) 1 NC_021898.1 COG0480 Translation elongation factors (GTPases); elongation factor G 503939 16429553 CTRC966_02290 Chlamydia trachomatis RC-J/966 elongation factor G YP_008354009.1 501855 R 907271 CDS YP_008354010.1 527327819 16429554 complement(503981..504454) 1 NC_021898.1 COG0049 Ribosomal protein S7; 30S ribosomal protein S7 504454 16429554 CTRC966_02295 Chlamydia trachomatis RC-J/966 30S ribosomal protein S7 YP_008354010.1 503981 R 907271 CDS YP_008354011.1 527327820 16429555 complement(504504..504875) 1 NC_021898.1 COG0048 Ribosomal protein S12; 30S ribosomal protein S12 504875 rpsL 16429555 rpsL Chlamydia trachomatis RC-J/966 30S ribosomal protein S12 YP_008354011.1 504504 R 907271 CDS YP_008354012.1 527327821 16429556 505135..505473 1 NC_021898.1 hypothetical protein 505473 16429556 CTRC966_02305 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354012.1 505135 D 907271 CDS YP_008354013.1 527327822 16429557 505631..507580 1 NC_021898.1 COG0793 Periplasmic protease; carboxy-terminal processing protease 507580 16429557 CTRC966_02310 Chlamydia trachomatis RC-J/966 carboxy-terminal processing protease YP_008354013.1 505631 D 907271 CDS YP_008354014.1 527327823 16429558 complement(507687..508139) 1 NC_021898.1 cysteine-rich membrane protein 508139 16429558 CTRC966_02315 Chlamydia trachomatis RC-J/966 cysteine-rich membrane protein YP_008354014.1 507687 R 907271 CDS YP_008354015.1 527327824 16429559 complement(508317..509978) 1 NC_021898.1 60kD cysteine-rich outer membrane protein 509978 16429559 CTRC966_02320 Chlamydia trachomatis RC-J/966 60kD cysteine-rich outer membrane protein YP_008354015.1 508317 R 907271 CDS YP_008354016.1 527327825 16429560 complement(510125..510391) 1 NC_021898.1 cysteine-rich outer membrane protein 510391 16429560 CTRC966_02325 Chlamydia trachomatis RC-J/966 cysteine-rich outer membrane protein YP_008354016.1 510125 R 907271 CDS YP_008354017.1 527327826 16429561 510728..510952 1 NC_021898.1 putative lipoprotein 510952 16429561 CTRC966_02330 Chlamydia trachomatis RC-J/966 putative lipoprotein YP_008354017.1 510728 D 907271 CDS YP_008354018.1 527327827 16429562 complement(510949..512469) 1 NC_021898.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase 512469 gltX 16429562 gltX Chlamydia trachomatis RC-J/966 glutamyl-tRNA synthetase YP_008354018.1 510949 R 907271 CDS YP_008354019.1 527327828 16429563 complement(512740..513291) 1 NC_021898.1 COG0005 Purine nucleoside phosphorylase; hypothetical protein 513291 16429563 CTRC966_02340 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354019.1 512740 R 907271 CDS YP_008354020.1 527327829 16429564 complement(513695..515449) 1 NC_021898.1 COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease 515449 16429564 CTRC966_02345 Chlamydia trachomatis RC-J/966 single-stranded-DNA-specific exonuclease YP_008354020.1 513695 R 907271 CDS YP_008354021.1 527327830 16429565 complement(515474..515566) 1 NC_021898.1 hypothetical protein 515566 16429565 CTRC966_02350 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354021.1 515474 R 907271 CDS YP_008354022.1 527327831 16429566 complement(515567..519769) 1 NC_021898.1 COG0342 Preprotein translocase subunit SecD; bifunctional preprotein translocase subunit SecD/SecF 519769 16429566 CTRC966_02355 Chlamydia trachomatis RC-J/966 bifunctional preprotein translocase subunit SecD/SecF YP_008354022.1 515567 R 907271 CDS YP_008354023.1 527327832 16429567 complement(520189..520521) 1 NC_021898.1 hypothetical protein 520521 16429567 CTRC966_02360 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354023.1 520189 R 907271 CDS YP_008354024.1 527327833 16429568 520983..521744 1 NC_021898.1 COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase 521744 16429568 CTRC966_02365 Chlamydia trachomatis RC-J/966 undecaprenyl pyrophosphate synthase YP_008354024.1 520983 D 907271 CDS YP_008354025.1 527327834 16429569 complement(521648..521812) 1 NC_021898.1 hypothetical protein 521812 16429569 CTRC966_02370 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354025.1 521648 R 907271 CDS YP_008354026.1 527327835 16429570 521750..522667 1 NC_021898.1 COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 522667 16429570 CTRC966_02375 Chlamydia trachomatis RC-J/966 phosphatidate cytidylyltransferase YP_008354026.1 521750 D 907271 CDS YP_008354027.1 527327836 16429571 522664..523314 1 NC_021898.1 COG0283 Cytidylate kinase; cytidylate kinase 523314 cmk 16429571 cmk Chlamydia trachomatis RC-J/966 cytidylate kinase YP_008354027.1 522664 D 907271 CDS YP_008354028.1 527327837 16429572 523311..523961 1 NC_021898.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 523961 16429572 CTRC966_02385 Chlamydia trachomatis RC-J/966 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008354028.1 523311 D 907271 CDS YP_008354029.1 527327838 16429573 523976..525667 1 NC_021898.1 COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase 525667 argS 16429573 argS Chlamydia trachomatis RC-J/966 arginyl-tRNA synthetase YP_008354029.1 523976 D 907271 CDS YP_008354030.1 527327839 16429574 complement(525705..527039) 1 NC_021898.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 527039 16429574 CTRC966_02395 Chlamydia trachomatis RC-J/966 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_008354030.1 525705 R 907271 CDS YP_008354031.1 527327840 16429575 527252..530269 1 NC_021898.1 translocated actin-recruiting phosphoprotein 530269 16429575 CTRC966_02400 Chlamydia trachomatis RC-J/966 translocated actin-recruiting phosphoprotein YP_008354031.1 527252 D 907271 CDS YP_008354032.1 527327841 16429576 complement(530321..531037) 1 NC_021898.1 COG0217 Uncharacterized conserved protein; hypothetical protein 531037 16429576 CTRC966_02405 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354032.1 530321 R 907271 CDS YP_008354033.1 527327842 16429577 complement(531220..531723) 1 NC_021898.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; ribosomal-protein-alanine acetyltransferase 531723 16429577 CTRC966_02410 Chlamydia trachomatis RC-J/966 ribosomal-protein-alanine acetyltransferase YP_008354033.1 531220 R 907271 CDS YP_008354034.1 527327843 16429578 complement(531720..532724) 1 NC_021898.1 COG1186 Protein chain release factor B; peptide chain release factor 2 532724 prfB 16429578 prfB Chlamydia trachomatis RC-J/966 peptide chain release factor 2 YP_008354034.1 531720 R 907271 CDS YP_008354035.1 527327844 16429579 533147..533407 1 NC_021898.1 COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling; hypothetical protein 533407 16429579 CTRC966_02420 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354035.1 533147 D 907271 CDS YP_008354036.1 527327845 16429580 533465..534454 1 NC_021898.1 COG1408 Predicted phosphohydrolases; putative metallo-phosphoesterase 534454 16429580 CTRC966_02425 Chlamydia trachomatis RC-J/966 putative metallo-phosphoesterase YP_008354036.1 533465 D 907271 CDS YP_008354037.1 527327846 16429581 534444..535103 1 NC_021898.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 535103 ispD 16429581 ispD Chlamydia trachomatis RC-J/966 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_008354037.1 534444 D 907271 CDS YP_008354038.1 527327847 16429582 535112..535915 1 NC_021898.1 COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 535915 truA 16429582 truA Chlamydia trachomatis RC-J/966 tRNA pseudouridine synthase A YP_008354038.1 535112 D 907271 CDS YP_008354039.1 527327848 16429583 complement(535867..536541) 1 NC_021898.1 COG0637 Predicted phosphatase/phosphohexomutase; HAD superfamily hydrolase 536541 16429583 CTRC966_02440 Chlamydia trachomatis RC-J/966 HAD superfamily hydrolase YP_008354039.1 535867 R 907271 CDS YP_008354040.1 527327849 16429584 536634..537275 1 NC_021898.1 hypothetical protein 537275 16429584 CTRC966_02445 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354040.1 536634 D 907271 CDS YP_008354041.1 527327850 16429586 537569..537898 1 NC_021898.1 hypothetical protein 537898 16429586 CTRC966_02450 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354041.1 537569 D 907271 CDS YP_008354042.1 527327851 16429587 537876..538934 1 NC_021898.1 COG0642 Signal transduction histidine kinase; two component regulator, histidine kinase 538934 16429587 CTRC966_02455 Chlamydia trachomatis RC-J/966 two component regulator, histidine kinase YP_008354042.1 537876 D 907271 CDS YP_008354043.1 527327852 16429588 538977..540137 1 NC_021898.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; two component system response regulator 540137 16429588 CTRC966_02460 Chlamydia trachomatis RC-J/966 two component system response regulator YP_008354043.1 538977 D 907271 CDS YP_008354044.1 527327853 16429590 540364..540900 1 NC_021898.1 hypothetical protein 540900 16429590 CTRC966_02465 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354044.1 540364 D 907271 CDS YP_008354045.1 527327854 16429591 540870..541601 1 NC_021898.1 COG1381 Recombinational DNA repair protein (RecF pathway); DNA repair protein RecO 541601 recO 16429591 recO Chlamydia trachomatis RC-J/966 DNA repair protein RecO YP_008354045.1 540870 D 907271 CDS YP_008354046.1 527327855 16429592 complement(541598..542200) 1 NC_021898.1 hypothetical protein 542200 16429592 CTRC966_02475 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354046.1 541598 R 907271 CDS YP_008354047.1 527327856 16429594 542678..543472 1 NC_021898.1 COG1723 Uncharacterized conserved protein; hypothetical protein 543472 16429594 CTRC966_02485 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354047.1 542678 D 907271 CDS YP_008354048.1 527327857 16429595 543478..543792 1 NC_021898.1 COG0759 Uncharacterized conserved protein; hypothetical protein 543792 16429595 CTRC966_02490 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354048.1 543478 D 907271 CDS YP_008354049.1 527327858 16429596 complement(543731..544660) 1 NC_021898.1 hypothetical protein 544660 16429596 CTRC966_02495 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354049.1 543731 R 907271 CDS YP_008354050.1 527327859 16429597 544748..547120 1 NC_021898.1 COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 547120 pheT 16429597 pheT Chlamydia trachomatis RC-J/966 phenylalanyl-tRNA synthetase subunit beta YP_008354050.1 544748 D 907271 CDS YP_008354051.1 527327860 16429598 547117..548082 1 NC_021898.1 COG2849 Uncharacterized protein conserved in bacteria; hypothetical protein 548082 16429598 CTRC966_02505 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354051.1 547117 D 907271 CDS YP_008354052.1 527327861 16429599 548101..548613 1 NC_021898.1 COG0350 Methylated DNA-protein cysteine methyltransferase; putative DNA methyltransferase 548613 16429599 CTRC966_02510 Chlamydia trachomatis RC-J/966 putative DNA methyltransferase YP_008354052.1 548101 D 907271 CDS YP_008354053.1 527327862 16429600 complement(548610..550346) 1 NC_021898.1 COG4239 ABC-type uncharacterized transport system, permease component; oligonucleotide transport system permease 550346 16429600 CTRC966_02515 Chlamydia trachomatis RC-J/966 oligonucleotide transport system permease YP_008354053.1 548610 R 907271 CDS YP_008354054.1 527327863 16429601 complement(550348..551826) 1 NC_021898.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; hypothetical protein 551826 16429601 CTRC966_02520 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354054.1 550348 R 907271 CDS YP_008354055.1 527327864 16429602 complement(551808..553898) 1 NC_021898.1 COG4166 ABC-type oligopeptide transport system, periplasmic component; oligopeptide transport system, binding protein 553898 16429602 CTRC966_02525 Chlamydia trachomatis RC-J/966 oligopeptide transport system, binding protein YP_008354055.1 551808 R 907271 CDS YP_008354056.1 527327865 16429603 complement(554149..554310) 1 NC_021898.1 hypothetical protein 554310 16429603 CTRC966_02530 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354056.1 554149 R 907271 CDS YP_008354057.1 527327866 16429604 complement(554504..555235) 1 NC_021898.1 COG0726 Predicted xylanase/chitin deacetylase; hypothetical protein 555235 16429604 CTRC966_02535 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354057.1 554504 R 907271 CDS YP_008354058.1 527327867 16429605 complement(555220..555381) 1 NC_021898.1 hypothetical protein 555381 16429605 CTRC966_02540 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354058.1 555220 R 907271 CDS YP_008354059.1 527327868 16429606 complement(555397..556050) 1 NC_021898.1 hypothetical protein 556050 16429606 CTRC966_02545 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354059.1 555397 R 907271 CDS YP_008354060.1 527327869 16429607 556287..556409 1 NC_021898.1 hypothetical protein 556409 16429607 CTRC966_02550 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354060.1 556287 D 907271 CDS YP_008354061.1 527327870 16429608 556518..556883 1 NC_021898.1 hypothetical protein 556883 16429608 CTRC966_02555 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354061.1 556518 D 907271 CDS YP_008354062.1 527327871 16429609 complement(556862..557860) 1 NC_021898.1 COG0457 FOG: TPR repeat; hypothetical protein 557860 16429609 CTRC966_02560 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354062.1 556862 R 907271 CDS YP_008354063.1 527327872 16429610 complement(558017..558961) 1 NC_021898.1 COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase 558961 hemH 16429610 hemH Chlamydia trachomatis RC-J/966 ferrochelatase YP_008354063.1 558017 R 907271 CDS YP_008354064.1 527327873 16429611 complement(558983..559768) 1 NC_021898.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine-binding protein 559768 16429611 CTRC966_02570 Chlamydia trachomatis RC-J/966 glutamine-binding protein YP_008354064.1 558983 R 907271 CDS YP_008354065.1 527327874 16429612 complement(559814..560386) 1 NC_021898.1 COG0742 N6-adenine-specific methylase; methyltransferase 560386 16429612 CTRC966_02575 Chlamydia trachomatis RC-J/966 methyltransferase YP_008354065.1 559814 R 907271 CDS YP_008354066.1 527327875 16429613 complement(560383..561117) 1 NC_021898.1 COG1768 Predicted phosphohydrolase; putative phosphohydrolase 561117 16429613 CTRC966_02580 Chlamydia trachomatis RC-J/966 putative phosphohydrolase YP_008354066.1 560383 R 907271 CDS YP_008354067.1 527327876 16429614 complement(561206..562531) 1 NC_021898.1 COG0448 ADP-glucose pyrophosphorylase; glucose-1-phosphate adenylyltransferase 562531 16429614 CTRC966_02585 Chlamydia trachomatis RC-J/966 glucose-1-phosphate adenylyltransferase YP_008354067.1 561206 R 907271 CDS YP_008354068.1 527327877 16429615 562723..562974 1 NC_021898.1 hypothetical protein 562974 16429615 CTRC966_02590 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354068.1 562723 D 907271 CDS YP_008354069.1 527327878 16429616 complement(562984..564378) 1 NC_021898.1 COG1158 Transcription termination factor; transcription termination factor Rho 564378 rho 16429616 rho Chlamydia trachomatis RC-J/966 transcription termination factor Rho YP_008354069.1 562984 R 907271 CDS YP_008354070.1 527327879 16429617 complement(564375..564983) 1 NC_021898.1 COG0237 Dephospho-CoA kinase; dephospho-CoA kinase 564983 coaE 16429617 coaE Chlamydia trachomatis RC-J/966 dephospho-CoA kinase YP_008354070.1 564375 R 907271 CDS YP_008354071.1 527327880 16429618 complement(564977..567577) 1 NC_021898.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I 567577 16429618 CTRC966_02605 Chlamydia trachomatis RC-J/966 DNA polymerase I YP_008354071.1 564977 R 907271 CDS YP_008354072.1 527327881 16429619 complement(567594..568589) 1 NC_021898.1 COG0616 Periplasmic serine proteases (ClpP class); exported protease IV 568589 16429619 CTRC966_02610 Chlamydia trachomatis RC-J/966 exported protease IV YP_008354072.1 567594 R 907271 CDS YP_008354073.1 527327882 16429620 complement(568729..570351) 1 NC_021898.1 COG3202 ATP/ADP translocase; putative nucleotide transport protein 570351 16429620 CTRC966_02615 Chlamydia trachomatis RC-J/966 putative nucleotide transport protein YP_008354073.1 568729 R 907271 CDS YP_008354074.1 527327883 16429621 complement(570563..571069) 1 NC_021898.1 COG0558 Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 571069 16429621 CTRC966_02620 Chlamydia trachomatis RC-J/966 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_008354074.1 570563 R 907271 CDS YP_008354075.1 527327884 16429623 complement(571465..571614) 1 NC_021898.1 hypothetical protein 571614 16429623 CTRC966_02625 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354075.1 571465 R 907271 CDS YP_008354076.1 527327885 16429624 571583..573001 1 NC_021898.1 COG0305 Replicative DNA helicase; replicative DNA helicase 573001 16429624 CTRC966_02630 Chlamydia trachomatis RC-J/966 replicative DNA helicase YP_008354076.1 571583 D 907271 CDS YP_008354077.1 527327886 16429625 573296..575128 1 NC_021898.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 575128 16429625 CTRC966_02635 Chlamydia trachomatis RC-J/966 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_008354077.1 573296 D 907271 CDS YP_008354078.1 527327887 16429626 575118..575819 1 NC_021898.1 COG0095 Lipoate-protein ligase A; lipoate-protein ligase A 575819 16429626 CTRC966_02640 Chlamydia trachomatis RC-J/966 lipoate-protein ligase A YP_008354078.1 575118 D 907271 CDS YP_008354079.1 527327888 16429627 complement(575876..576301) 1 NC_021898.1 COG0105 Nucleoside diphosphate kinase; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase 576301 ndk 16429627 ndk Chlamydia trachomatis RC-J/966 multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase YP_008354079.1 575876 R 907271 CDS YP_008354080.1 527327889 16429628 complement(576461..577063) 1 NC_021898.1 COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA 577063 ruvA 16429628 ruvA Chlamydia trachomatis RC-J/966 Holliday junction DNA helicase RuvA YP_008354080.1 576461 R 907271 CDS YP_008354081.1 527327890 16429629 complement(577083..577595) 1 NC_021898.1 COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase 577595 ruvC 16429629 ruvC Chlamydia trachomatis RC-J/966 Holliday junction resolvase YP_008354081.1 577083 R 907271 CDS YP_008354082.1 527327891 16429630 complement(577703..578257) 1 NC_021898.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); hypothetical protein 578257 16429630 CTRC966_02660 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354082.1 577703 R 907271 CDS YP_008354083.1 527327892 16429632 complement(578544..579410) 1 NC_021898.1 hypothetical protein 579410 16429632 CTRC966_02665 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354083.1 578544 R 907271 CDS YP_008354084.1 527327893 16429633 complement(579421..580425) 1 NC_021898.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 580425 16429633 CTRC966_02670 Chlamydia trachomatis RC-J/966 glyceraldehyde-3-phosphate dehydrogenase YP_008354084.1 579421 R 907271 CDS YP_008354085.1 527327894 16429634 complement(580469..580894) 1 NC_021898.1 COG0203 Ribosomal protein L17; 50S ribosomal protein L17 580894 rplQ 16429634 rplQ Chlamydia trachomatis RC-J/966 50S ribosomal protein L17 YP_008354085.1 580469 R 907271 CDS YP_008354086.1 527327895 16429635 complement(580903..582036) 1 NC_021898.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha 582036 16429635 CTRC966_02680 Chlamydia trachomatis RC-J/966 DNA-directed RNA polymerase subunit alpha YP_008354086.1 580903 R 907271 CDS YP_008354087.1 527327896 16429636 complement(582057..582455) 1 NC_021898.1 COG0100 Ribosomal protein S11; 30S ribosomal protein S11 582455 16429636 CTRC966_02685 Chlamydia trachomatis RC-J/966 30S ribosomal protein S11 YP_008354087.1 582057 R 907271 CDS YP_008354088.1 527327897 16429637 complement(582477..582845) 1 NC_021898.1 COG0099 Ribosomal protein S13; 30S ribosomal protein S13 582845 rpsM 16429637 rpsM Chlamydia trachomatis RC-J/966 30S ribosomal protein S13 YP_008354088.1 582477 R 907271 CDS YP_008354089.1 527327898 16429638 complement(582901..584274) 1 NC_021898.1 COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY 584274 secY 16429638 secY Chlamydia trachomatis RC-J/966 preprotein translocase subunit SecY YP_008354089.1 582901 R 907271 CDS YP_008354090.1 527327899 16429639 complement(584297..584731) 1 NC_021898.1 COG0200 Ribosomal protein L15; 50S ribosomal protein L15 584731 rplO 16429639 rplO Chlamydia trachomatis RC-J/966 50S ribosomal protein L15 YP_008354090.1 584297 R 907271 CDS YP_008354091.1 527327900 16429640 complement(584724..585221) 1 NC_021898.1 COG0098 Ribosomal protein S5; 30S ribosomal protein S5 585221 rpsE 16429640 rpsE Chlamydia trachomatis RC-J/966 30S ribosomal protein S5 YP_008354091.1 584724 R 907271 CDS YP_008354092.1 527327901 16429641 complement(585236..585607) 1 NC_021898.1 COG0256 Ribosomal protein L18; 50S ribosomal protein L18 585607 rplR 16429641 rplR Chlamydia trachomatis RC-J/966 50S ribosomal protein L18 YP_008354092.1 585236 R 907271 CDS YP_008354093.1 527327902 16429642 complement(585629..586180) 1 NC_021898.1 COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 586180 rplF 16429642 rplF Chlamydia trachomatis RC-J/966 50S ribosomal protein L6 YP_008354093.1 585629 R 907271 CDS YP_008354094.1 527327903 16429643 complement(586208..586609) 1 NC_021898.1 COG0096 Ribosomal protein S8; 30S ribosomal protein S8 586609 rpsH 16429643 rpsH Chlamydia trachomatis RC-J/966 30S ribosomal protein S8 YP_008354094.1 586208 R 907271 CDS YP_008354095.1 527327904 16429644 complement(586627..587169) 1 NC_021898.1 COG0094 Ribosomal protein L5; 50S ribosomal protein L5 587169 rplE 16429644 rplE Chlamydia trachomatis RC-J/966 50S ribosomal protein L5 YP_008354095.1 586627 R 907271 CDS YP_008354096.1 527327905 16429645 complement(587171..587506) 1 NC_021898.1 COG0198 Ribosomal protein L24; 50S ribosomal protein L24 587506 rplX 16429645 rplX Chlamydia trachomatis RC-J/966 50S ribosomal protein L24 YP_008354096.1 587171 R 907271 CDS YP_008354097.1 527327906 16429646 complement(587519..587887) 1 NC_021898.1 COG0093 Ribosomal protein L14; 50S ribosomal protein L14 587887 rplN 16429646 rplN Chlamydia trachomatis RC-J/966 50S ribosomal protein L14 YP_008354097.1 587519 R 907271 CDS YP_008354098.1 527327907 16429647 complement(587904..588155) 1 NC_021898.1 COG0186 Ribosomal protein S17; 30S ribosomal protein S17 588155 rpsQ 16429647 rpsQ Chlamydia trachomatis RC-J/966 30S ribosomal protein S17 YP_008354098.1 587904 R 907271 CDS YP_008354099.1 527327908 16429648 complement(588148..588366) 1 NC_021898.1 COG0255 Ribosomal protein L29; 50S ribosomal protein L29 588366 16429648 CTRC966_02745 Chlamydia trachomatis RC-J/966 50S ribosomal protein L29 YP_008354099.1 588148 R 907271 CDS YP_008354100.1 527327909 16429649 complement(588368..588784) 1 NC_021898.1 COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 588784 rplP 16429649 rplP Chlamydia trachomatis RC-J/966 50S ribosomal protein L16 YP_008354100.1 588368 R 907271 CDS YP_008354101.1 527327910 16429650 complement(588817..589491) 1 NC_021898.1 COG0092 Ribosomal protein S3; 30S ribosomal protein S3 589491 rpsC 16429650 rpsC Chlamydia trachomatis RC-J/966 30S ribosomal protein S3 YP_008354101.1 588817 R 907271 CDS YP_008354102.1 527327911 16429651 complement(589501..589836) 1 NC_021898.1 COG0091 Ribosomal protein L22; 50S ribosomal protein L22 589836 rplV 16429651 rplV Chlamydia trachomatis RC-J/966 50S ribosomal protein L22 YP_008354102.1 589501 R 907271 CDS YP_008354103.1 527327912 16429652 complement(589855..590121) 1 NC_021898.1 COG0185 Ribosomal protein S19; 30S ribosomal protein S19 590121 rpsS 16429652 rpsS Chlamydia trachomatis RC-J/966 30S ribosomal protein S19 YP_008354103.1 589855 R 907271 CDS YP_008354104.1 527327913 16429653 complement(590127..590981) 1 NC_021898.1 COG0090 Ribosomal protein L2; 50S ribosomal protein L2 590981 rplB 16429653 rplB Chlamydia trachomatis RC-J/966 50S ribosomal protein L2 YP_008354104.1 590127 R 907271 CDS YP_008354105.1 527327914 16429654 complement(591005..591340) 1 NC_021898.1 COG0089 Ribosomal protein L23; 50S ribosomal protein L23 591340 rplW 16429654 rplW Chlamydia trachomatis RC-J/966 50S ribosomal protein L23 YP_008354105.1 591005 R 907271 CDS YP_008354106.1 527327915 16429655 complement(591356..592024) 1 NC_021898.1 COG0088 Ribosomal protein L4; 50S ribosomal protein L4 592024 rplD 16429655 rplD Chlamydia trachomatis RC-J/966 50S ribosomal protein L4 YP_008354106.1 591356 R 907271 CDS YP_008354107.1 527327916 16429656 complement(592033..592698) 1 NC_021898.1 COG0087 Ribosomal protein L3; 50S ribosomal protein L3 592698 rplC 16429656 rplC Chlamydia trachomatis RC-J/966 50S ribosomal protein L3 YP_008354107.1 592033 R 907271 CDS YP_008354108.1 527327917 16429657 complement(593133..594029) 1 NC_021898.1 hypothetical protein 594029 16429657 CTRC966_02790 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354108.1 593133 R 907271 CDS YP_008354109.1 527327918 16429658 complement(594195..595145) 1 NC_021898.1 COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 595145 fmt 16429658 fmt Chlamydia trachomatis RC-J/966 methionyl-tRNA formyltransferase YP_008354109.1 594195 R 907271 CDS YP_008354110.1 527327919 16429659 complement(595135..595977) 1 NC_021898.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase 595977 16429659 CTRC966_02800 Chlamydia trachomatis RC-J/966 UDP-N-acetylglucosamine acyltransferase YP_008354110.1 595135 R 907271 CDS YP_008354111.1 527327920 16429660 complement(595989..596450) 1 NC_021898.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase 596450 fabZ 16429660 fabZ Chlamydia trachomatis RC-J/966 (3R)-hydroxymyristoyl-ACP dehydratase YP_008354111.1 595989 R 907271 CDS YP_008354112.1 527327921 16429661 complement(596447..597307) 1 NC_021898.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 597307 lpxC 16429661 lpxC Chlamydia trachomatis RC-J/966 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_008354112.1 596447 R 907271 CDS YP_008354113.1 527327922 16429662 complement(597407..599035) 1 NC_021898.1 COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 599035 lnt 16429662 lnt Chlamydia trachomatis RC-J/966 apolipoprotein N-acyltransferase YP_008354113.1 597407 R 907271 CDS YP_008354114.1 527327923 16429663 complement(599099..599581) 1 NC_021898.1 COG1607 Acyl-CoA hydrolase; acyl-CoA hydrolase 599581 16429663 CTRC966_02820 Chlamydia trachomatis RC-J/966 acyl-CoA hydrolase YP_008354114.1 599099 R 907271 CDS YP_008354115.1 527327924 16429664 complement(599717..600469) 1 NC_021898.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon 600469 16429664 CTRC966_02825 Chlamydia trachomatis RC-J/966 DNA polymerase III subunit epsilon YP_008354115.1 599717 R 907271 CDS YP_008354116.1 527327925 16429665 complement(600473..600946) 1 NC_021898.1 COG0802 Predicted ATPase or kinase; putative nucleotide-binding protein 600946 16429665 CTRC966_02830 Chlamydia trachomatis RC-J/966 putative nucleotide-binding protein YP_008354116.1 600473 R 907271 CDS YP_008354117.1 527327926 16429666 complement(600925..601641) 1 NC_021898.1 hypothetical protein 601641 16429666 CTRC966_02835 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354117.1 600925 R 907271 CDS YP_008354118.1 527327927 16429668 602363..602671 1 NC_021898.1 COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 602671 16429668 CTRC966_02840 Chlamydia trachomatis RC-J/966 thioredoxin YP_008354118.1 602363 D 907271 CDS YP_008354119.1 527327928 16429669 complement(602721..603176) 1 NC_021898.1 COG0219 Predicted rRNA methylase (SpoU class); SpoU family rRNA methylase 603176 16429669 CTRC966_02845 Chlamydia trachomatis RC-J/966 SpoU family rRNA methylase YP_008354119.1 602721 R 907271 CDS YP_008354120.1 527327929 16429670 complement(603192..603923) 1 NC_021898.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; peptidyl-prolyl cis-trans isomerase 603923 16429670 CTRC966_02850 Chlamydia trachomatis RC-J/966 peptidyl-prolyl cis-trans isomerase YP_008354120.1 603192 R 907271 CDS YP_008354121.1 527327930 16429671 complement(604061..605809) 1 NC_021898.1 COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 605809 aspS 16429671 aspS Chlamydia trachomatis RC-J/966 aspartyl-tRNA synthetase YP_008354121.1 604061 R 907271 CDS YP_008354122.1 527327931 16429672 complement(605790..607076) 1 NC_021898.1 COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase 607076 hisS 16429672 hisS Chlamydia trachomatis RC-J/966 histidyl-tRNA synthetase YP_008354122.1 605790 R 907271 CDS YP_008354123.1 527327932 16429673 607512..608882 1 NC_021898.1 COG2271 Sugar phosphate permease; putative sugar phosphate permease 608882 16429673 CTRC966_02865 Chlamydia trachomatis RC-J/966 putative sugar phosphate permease YP_008354123.1 607512 D 907271 CDS YP_008354124.1 527327933 16429674 608896..612609 1 NC_021898.1 COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 612609 dnaE 16429674 dnaE Chlamydia trachomatis RC-J/966 DNA polymerase III subunit alpha YP_008354124.1 608896 D 907271 CDS YP_008354125.1 527327934 16429675 complement(612838..613707) 1 NC_021898.1 hypothetical protein 613707 16429675 CTRC966_02875 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354125.1 612838 R 907271 CDS YP_008354126.1 527327935 16429676 613859..614815 1 NC_021898.1 COG1729 Uncharacterized protein conserved in bacteria; hypothetical protein 614815 16429676 CTRC966_02880 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354126.1 613859 D 907271 CDS YP_008354127.1 527327936 16429677 614840..615424 1 NC_021898.1 hypothetical protein 615424 16429677 CTRC966_02885 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354127.1 614840 D 907271 CDS YP_008354128.1 527327937 16429678 615411..615851 1 NC_021898.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); sigma regulatory factor-histidine kinase 615851 16429678 CTRC966_02890 Chlamydia trachomatis RC-J/966 sigma regulatory factor-histidine kinase YP_008354128.1 615411 D 907271 CDS YP_008354129.1 527327938 16429679 complement(615858..616283) 1 NC_021898.1 hypothetical protein 616283 16429679 CTRC966_02895 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354129.1 615858 R 907271 CDS YP_008354130.1 527327939 16429680 616391..617704 1 NC_021898.1 COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 617704 16429680 CTRC966_02900 Chlamydia trachomatis RC-J/966 D-alanyl-D-alanine carboxypeptidase YP_008354130.1 616391 D 907271 CDS YP_008354131.1 527327940 16429681 617837..618244 1 NC_021898.1 hypothetical protein 618244 16429681 CTRC966_02905 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354131.1 617837 D 907271 CDS YP_008354132.1 527327941 16429682 618241..619347 1 NC_021898.1 COG0144 tRNA and rRNA cytosine-C5-methylases; putative methyltransferase 619347 16429682 CTRC966_02910 Chlamydia trachomatis RC-J/966 putative methyltransferase YP_008354132.1 618241 D 907271 CDS YP_008354133.1 527327942 16429683 619497..620732 1 NC_021898.1 COG1114 Branched-chain amino acid permeases; branched-chain amino acid transport system carrier protein 620732 16429683 CTRC966_02915 Chlamydia trachomatis RC-J/966 branched-chain amino acid transport system carrier protein YP_008354133.1 619497 D 907271 CDS YP_008354134.1 527327943 16429684 620906..624505 1 NC_021898.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family; helicase 624505 16429684 CTRC966_02920 Chlamydia trachomatis RC-J/966 helicase YP_008354134.1 620906 D 907271 CDS YP_008354135.1 527327944 16429685 624684..625163 1 NC_021898.1 hypothetical protein 625163 16429685 CTRC966_02925 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354135.1 624684 D 907271 CDS YP_008354136.1 527327945 16429686 625372..626769 1 NC_021898.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase 626769 16429686 CTRC966_02930 Chlamydia trachomatis RC-J/966 dihydrolipoamide dehydrogenase YP_008354136.1 625372 D 907271 CDS YP_008354137.1 527327946 16429687 626766..627701 1 NC_021898.1 COG0320 Lipoate synthase; lipoyl synthase 627701 16429687 CTRC966_02935 Chlamydia trachomatis RC-J/966 lipoyl synthase YP_008354137.1 626766 D 907271 CDS YP_008354138.1 527327947 16429688 627805..628782 1 NC_021898.1 COG4669 Type III secretory pathway, lipoprotein EscJ; type III secretion system protein, membrane component 628782 16429688 CTRC966_02940 Chlamydia trachomatis RC-J/966 type III secretion system protein, membrane component YP_008354138.1 627805 D 907271 CDS YP_008354139.1 527327948 16429689 628783..629619 1 NC_021898.1 hypothetical protein 629619 16429689 CTRC966_02945 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354139.1 628783 D 907271 CDS YP_008354140.1 527327949 16429690 629704..629898 1 NC_021898.1 hypothetical protein 629898 16429690 CTRC966_02950 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354140.1 629704 D 907271 CDS YP_008354141.1 527327950 16429691 629895..630566 1 NC_021898.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein; type III secretion system protein 630566 16429691 CTRC966_02955 Chlamydia trachomatis RC-J/966 type III secretion system protein YP_008354141.1 629895 D 907271 CDS YP_008354142.1 527327951 16429692 630579..631499 1 NC_021898.1 COG1338 Flagellar biosynthesis pathway, component FliP; type III secretion system protein 631499 16429692 CTRC966_02960 Chlamydia trachomatis RC-J/966 type III secretion system protein YP_008354142.1 630579 D 907271 CDS YP_008354143.1 527327952 16429693 631511..631795 1 NC_021898.1 COG4794 Type III secretory pathway, component EscS; type III secretion system, membrane protein 631795 16429693 CTRC966_02965 Chlamydia trachomatis RC-J/966 type III secretion system, membrane protein YP_008354143.1 631511 D 907271 CDS YP_008354144.1 527327953 16429694 631802..632671 1 NC_021898.1 COG4791 Type III secretory pathway, component EscT; type III secretion system, membrane protein 632671 16429694 CTRC966_02970 Chlamydia trachomatis RC-J/966 type III secretion system, membrane protein YP_008354144.1 631802 D 907271 CDS YP_008354145.1 527327954 16429695 complement(632750..633193) 1 NC_021898.1 hypothetical protein 633193 16429695 CTRC966_02975 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354145.1 632750 R 907271 CDS YP_008354146.1 527327955 16429696 complement(633283..634275) 1 NC_021898.1 hypothetical protein 634275 16429696 CTRC966_02980 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354146.1 633283 R 907271 CDS YP_008354147.1 527327956 16429697 complement(634281..634805) 1 NC_021898.1 hypothetical protein 634805 16429697 CTRC966_02985 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354147.1 634281 R 907271 CDS YP_008354148.1 527327957 16429698 complement(634790..635245) 1 NC_021898.1 hypothetical protein 635245 16429698 CTRC966_02990 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354148.1 634790 R 907271 CDS YP_008354149.1 527327958 16429699 complement(635229..635558) 1 NC_021898.1 general secretion pathway protein G 635558 16429699 CTRC966_02995 Chlamydia trachomatis RC-J/966 general secretion pathway protein G YP_008354149.1 635229 R 907271 CDS YP_008354150.1 527327959 16429700 complement(635620..636795) 1 NC_021898.1 COG1459 Type II secretory pathway, component PulF; general secretion pathway protein F 636795 16429700 CTRC966_03000 Chlamydia trachomatis RC-J/966 general secretion pathway protein F YP_008354150.1 635620 R 907271 CDS YP_008354151.1 527327960 16429701 complement(636807..638312) 1 NC_021898.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; general secretion pathway protein E 638312 16429701 CTRC966_03005 Chlamydia trachomatis RC-J/966 general secretion pathway protein E YP_008354151.1 636807 R 907271 CDS YP_008354152.1 527327961 16429702 complement(638296..640578) 1 NC_021898.1 COG1450 Type II secretory pathway, component PulD; general secretion pathway protein D 640578 16429702 CTRC966_03010 Chlamydia trachomatis RC-J/966 general secretion pathway protein D YP_008354152.1 638296 R 907271 CDS YP_008354153.1 527327962 16429703 complement(640579..641808) 1 NC_021898.1 hypothetical protein 641808 16429703 CTRC966_03015 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354153.1 640579 R 907271 CDS YP_008354154.1 527327963 16429704 complement(641936..643006) 1 NC_021898.1 COG0006 Xaa-Pro aminopeptidase; proline dipeptidase 643006 16429704 CTRC966_03020 Chlamydia trachomatis RC-J/966 proline dipeptidase YP_008354154.1 641936 R 907271 CDS YP_008354155.1 527327964 16429705 complement(643017..644747) 1 NC_021898.1 COG0323 DNA mismatch repair enzyme (predicted ATPase); DNA mismatch repair protein 644747 mutL 16429705 mutL Chlamydia trachomatis RC-J/966 DNA mismatch repair protein YP_008354155.1 643017 R 907271 CDS YP_008354156.1 527327965 16429706 645042..645740 1 NC_021898.1 COG0457 FOG: TPR repeat; type III secretion chaperone (low calcium response protein H) 645740 16429706 CTRC966_03030 Chlamydia trachomatis RC-J/966 type III secretion chaperone (low calcium response protein H) YP_008354156.1 645042 D 907271 CDS YP_008354157.1 527327966 16429707 645757..646116 1 NC_021898.1 hypothetical protein 646116 16429707 CTRC966_03035 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354157.1 645757 D 907271 CDS YP_008354158.1 527327967 16429708 646153..647616 1 NC_021898.1 putative type III secretion system membrane protein 647616 16429708 CTRC966_03040 Chlamydia trachomatis RC-J/966 putative type III secretion system membrane protein YP_008354158.1 646153 D 907271 CDS YP_008354159.1 527327968 16429709 647647..648966 1 NC_021898.1 putative type III secretion system protein 648966 16429709 CTRC966_03045 Chlamydia trachomatis RC-J/966 putative type III secretion system protein YP_008354159.1 647647 D 907271 CDS YP_008354160.1 527327969 16429710 complement(649044..650027) 1 NC_021898.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative integral membrane protein 650027 16429710 CTRC966_03050 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354160.1 649044 R 907271 CDS YP_008354161.1 527327970 16429711 650332..652239 1 NC_021898.1 COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 652239 thrS 16429711 thrS Chlamydia trachomatis RC-J/966 threonyl-tRNA synthetase YP_008354161.1 650332 D 907271 CDS YP_008354162.1 527327971 16429712 652691..653458 1 NC_021898.1 COG1192 ATPases involved in chromosome partitioning; Chromosome partitioning ATPase (ParA family) protein 653458 16429712 CTRC966_03060 Chlamydia trachomatis RC-J/966 Chromosome partitioning ATPase (ParA family) protein YP_008354162.1 652691 D 907271 CDS YP_008354163.1 527327972 16429713 653463..654254 1 NC_021898.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; virulence plasmid protein pGP6-D-related protein 654254 16429713 CTRC966_03065 Chlamydia trachomatis RC-J/966 virulence plasmid protein pGP6-D-related protein YP_008354163.1 653463 D 907271 CDS YP_008354164.1 527327973 16429714 654220..654771 1 NC_021898.1 hypothetical protein 654771 16429714 CTRC966_03070 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354164.1 654220 D 907271 CDS YP_008354165.1 527327974 16429715 654950..655990 1 NC_021898.1 COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 655990 16429715 CTRC966_03075 Chlamydia trachomatis RC-J/966 tryptophanyl-tRNA synthetase YP_008354165.1 654950 D 907271 CDS YP_008354166.1 527327975 16429716 656015..658021 1 NC_021898.1 COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B 658021 16429716 CTRC966_03080 Chlamydia trachomatis RC-J/966 excinuclease ABC subunit B YP_008354166.1 656015 D 907271 CDS YP_008354167.1 527327976 16429717 658183..659457 1 NC_021898.1 COG0148 Enolase; enolase 659457 eno 16429717 eno Chlamydia trachomatis RC-J/966 enolase YP_008354167.1 658183 D 907271 CDS YP_008354168.1 527327977 16429718 659585..661537 1 NC_021898.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit; sigma regulatory family protein-PP2C phosphatase 661537 16429718 CTRC966_03090 Chlamydia trachomatis RC-J/966 sigma regulatory family protein-PP2C phosphatase YP_008354168.1 659585 D 907271 CDS YP_008354169.1 527327978 16429719 661662..663470 1 NC_021898.1 hypothetical protein 663470 16429719 CTRC966_03095 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354169.1 661662 D 907271 CDS YP_008354170.1 527327979 16429720 complement(663485..666349) 1 NC_021898.1 hypothetical protein 666349 16429720 CTRC966_03100 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354170.1 663485 R 907271 CDS YP_008354171.1 527327980 16429721 complement(666446..667144) 1 NC_021898.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; succinate dehydrogenase iron-sulfur subunit 667144 sdhB 16429721 sdhB Chlamydia trachomatis RC-J/966 succinate dehydrogenase iron-sulfur subunit YP_008354171.1 666446 R 907271 CDS YP_008354172.1 527327981 16429722 complement(667223..669103) 1 NC_021898.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase flavoprotein subunit 669103 sdhA 16429722 sdhA Chlamydia trachomatis RC-J/966 succinate dehydrogenase flavoprotein subunit YP_008354172.1 667223 R 907271 CDS YP_008354173.1 527327982 16429723 complement(669100..669618) 1 NC_021898.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase cytochrome b558 subunit 669618 16429723 CTRC966_03115 Chlamydia trachomatis RC-J/966 succinate dehydrogenase cytochrome b558 subunit YP_008354173.1 669100 R 907271 CDS YP_008354174.1 527327983 16429724 complement(669770..669961) 1 NC_021898.1 succinate dehydrogenase, cytochrome b558 subunit, putative 669961 16429724 CTRC966_03120 Chlamydia trachomatis RC-J/966 succinate dehydrogenase, cytochrome b558 subunit, putative YP_008354174.1 669770 R 907271 CDS YP_008354175.1 527327984 16429725 complement(670108..670899) 1 NC_021898.1 COG0084 Mg-dependent DNase; putative hydrolase 670899 16429725 CTRC966_03125 Chlamydia trachomatis RC-J/966 putative hydrolase YP_008354175.1 670108 R 907271 CDS YP_008354176.1 527327985 16429726 complement(670984..673062) 1 NC_021898.1 COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis; thiol:disulfide interchange protein 673062 16429726 CTRC966_03130 Chlamydia trachomatis RC-J/966 thiol:disulfide interchange protein YP_008354176.1 670984 R 907271 CDS YP_008354177.1 527327986 16429727 673215..673913 1 NC_021898.1 COG0811 Biopolymer transport proteins; macromolecule transporter 673913 16429727 CTRC966_03135 Chlamydia trachomatis RC-J/966 macromolecule transporter YP_008354177.1 673215 D 907271 CDS YP_008354178.1 527327987 16429728 673910..674317 1 NC_021898.1 COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 674317 16429728 CTRC966_03140 Chlamydia trachomatis RC-J/966 biopolymer transport protein ExbD YP_008354178.1 673910 D 907271 CDS YP_008354179.1 527327988 16429729 674320..675027 1 NC_021898.1 histone H1-I 675027 16429729 CTRC966_03145 Chlamydia trachomatis RC-J/966 histone H1-I YP_008354179.1 674320 D 907271 CDS YP_008354180.1 527327989 16429730 675027..676322 1 NC_021898.1 COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB 676322 tolB 16429730 tolB Chlamydia trachomatis RC-J/966 translocation protein TolB YP_008354180.1 675027 D 907271 CDS YP_008354181.1 527327990 16429731 676319..676885 1 NC_021898.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein 676885 16429731 CTRC966_03155 Chlamydia trachomatis RC-J/966 peptidoglycan-associated lipoprotein YP_008354181.1 676319 D 907271 CDS YP_008354182.1 527327991 16429732 676875..677477 1 NC_021898.1 COG1388 FOG: LysM repeat; putative soluble transglycosylase 677477 16429732 CTRC966_03160 Chlamydia trachomatis RC-J/966 putative soluble transglycosylase YP_008354182.1 676875 D 907271 CDS YP_008354183.1 527327992 16429733 677548..677940 1 NC_021898.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; hypothetical protein 677940 16429733 CTRC966_03165 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354183.1 677548 D 907271 CDS YP_008354184.1 527327993 16429734 complement(677937..678524) 1 NC_021898.1 COG0450 Peroxiredoxin; thioredoxin peroxidase 678524 16429734 CTRC966_03170 Chlamydia trachomatis RC-J/966 thioredoxin peroxidase YP_008354184.1 677937 R 907271 CDS YP_008354185.1 527327994 16429736 complement(678732..680333) 1 NC_021898.1 COG0459 Chaperonin GroEL (HSP60 family); 60 kDa chaperonin GroEL2 680333 16429736 CTRC966_03175 Chlamydia trachomatis RC-J/966 60 kDa chaperonin GroEL2 YP_008354185.1 678732 R 907271 CDS YP_008354186.1 527327995 16429737 complement(680413..681639) 1 NC_021898.1 COG3876 Uncharacterized protein conserved in bacteria; hypothetical protein 681639 16429737 CTRC966_03180 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354186.1 680413 R 907271 CDS YP_008354187.1 527327996 16429738 681746..681838 1 NC_021898.1 hypothetical protein 681838 16429738 CTRC966_03185 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354187.1 681746 D 907271 CDS YP_008354188.1 527327997 16429739 681835..682464 1 NC_021898.1 COG0127 Xanthosine triphosphate pyrophosphatase; dITP/XTP pyrophosphatase 682464 16429739 CTRC966_03190 Chlamydia trachomatis RC-J/966 dITP/XTP pyrophosphatase YP_008354188.1 681835 D 907271 CDS YP_008354189.1 527327998 16429740 complement(682438..682665) 1 NC_021898.1 hypothetical protein 682665 16429740 CTRC966_03195 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354189.1 682438 R 907271 CDS YP_008354190.1 527327999 16429741 complement(682662..683351) 1 NC_021898.1 COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase 683351 16429741 CTRC966_03200 Chlamydia trachomatis RC-J/966 uracil-DNA glycosylase YP_008354190.1 682662 R 907271 CDS YP_008354191.1 527328000 16429742 683432..685336 1 NC_021898.1 COG0210 Superfamily I DNA and RNA helicases; DNA helicase 685336 16429742 CTRC966_03205 Chlamydia trachomatis RC-J/966 DNA helicase YP_008354191.1 683432 D 907271 CDS YP_008354192.1 527328001 16429743 685340..686650 1 NC_021898.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 686650 16429743 CTRC966_03210 Chlamydia trachomatis RC-J/966 RNA polymerase factor sigma-54 YP_008354192.1 685340 D 907271 CDS YP_008354193.1 527328002 16429744 complement(686758..687453) 1 NC_021898.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; hypothetical protein 687453 16429744 CTRC966_03215 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354193.1 686758 R 907271 CDS YP_008354194.1 527328003 16429745 complement(687450..688181) 1 NC_021898.1 COG1478 Uncharacterized conserved protein; hypothetical protein 688181 16429745 CTRC966_03220 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354194.1 687450 R 907271 CDS YP_008354195.1 527328004 16429746 complement(688153..688632) 1 NC_021898.1 COG0262 Dihydrofolate reductase; dihydrofolate reductase 688632 16429746 CTRC966_03225 Chlamydia trachomatis RC-J/966 dihydrofolate reductase YP_008354195.1 688153 R 907271 CDS YP_008354196.1 527328005 16429747 complement(688629..689981) 1 NC_021898.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase 689981 16429747 CTRC966_03230 Chlamydia trachomatis RC-J/966 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase YP_008354196.1 688629 R 907271 CDS YP_008354197.1 527328006 16429748 complement(689978..690352) 1 NC_021898.1 COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase 690352 16429748 CTRC966_03235 Chlamydia trachomatis RC-J/966 dihydroneopterin aldolase YP_008354197.1 689978 R 907271 CDS YP_008354198.1 527328007 16429749 complement(690371..692086) 1 NC_021898.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor 692086 16429749 CTRC966_03240 Chlamydia trachomatis RC-J/966 RNA polymerase sigma factor YP_008354198.1 690371 R 907271 CDS YP_008354199.1 527328008 16429750 complement(692234..693523) 1 NC_021898.1 putative integral membrane protein 693523 16429750 CTRC966_03245 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354199.1 692234 R 907271 CDS YP_008354200.1 527328009 16429751 693972..694268 1 NC_021898.1 COG0268 Ribosomal protein S20; 30S ribosomal protein S20 694268 rpsT 16429751 rpsT Chlamydia trachomatis RC-J/966 30S ribosomal protein S20 YP_008354200.1 693972 D 907271 CDS YP_008354201.1 527328010 16429752 694501..695301 1 NC_021898.1 hypothetical protein 695301 16429752 CTRC966_03255 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354201.1 694501 D 907271 CDS YP_008354202.1 527328011 16429753 complement(695357..697990) 1 NC_021898.1 hypothetical protein 697990 16429753 CTRC966_03260 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354202.1 695357 R 907271 CDS YP_008354203.1 527328012 16429754 698105..700621 1 NC_021898.1 COG0525 Valyl-tRNA synthetase; hypothetical protein 700621 16429754 CTRC966_03265 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354203.1 698105 D 907271 CDS YP_008354204.1 527328013 16429755 complement(700685..703183) 1 NC_021898.1 hypothetical protein 703183 16429755 CTRC966_03270 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354204.1 700685 R 907271 CDS YP_008354205.1 527328014 16429756 complement(703411..705366) 1 NC_021898.1 CHLPN 76 kD protein-like protein 705366 16429756 CTRC966_03275 Chlamydia trachomatis RC-J/966 CHLPN 76 kD protein-like protein YP_008354205.1 703411 R 907271 CDS YP_008354206.1 527328015 16429757 complement(705474..706772) 1 NC_021898.1 hypothetical protein 706772 16429757 CTRC966_03280 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354206.1 705474 R 907271 CDS YP_008354207.1 527328016 16429758 complement(707015..708625) 1 NC_021898.1 COG0728 Uncharacterized membrane protein, putative virulence factor; integral membrane protein 708625 16429758 CTRC966_03285 Chlamydia trachomatis RC-J/966 integral membrane protein YP_008354207.1 707015 R 907271 CDS YP_008354208.1 527328017 16429759 708798..709664 1 NC_021898.1 COG0648 Endonuclease IV; endonuclease IV 709664 16429759 CTRC966_03290 Chlamydia trachomatis RC-J/966 endonuclease IV YP_008354208.1 708798 D 907271 CDS YP_008354209.1 527328018 16429760 complement(709647..709739) 1 NC_021898.1 hypothetical protein 709739 16429760 CTRC966_03295 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354209.1 709647 R 907271 CDS YP_008354210.1 527328019 16429761 complement(709761..710390) 1 NC_021898.1 COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 710390 rpsD 16429761 rpsD Chlamydia trachomatis RC-J/966 30S ribosomal protein S4 YP_008354210.1 709761 R 907271 CDS YP_008354211.1 527328020 16429762 710774..711757 1 NC_021898.1 COG1054 Predicted sulfurtransferase; putative rhodanese-related sulfurtransferase 711757 16429762 CTRC966_03305 Chlamydia trachomatis RC-J/966 putative rhodanese-related sulfurtransferase YP_008354211.1 710774 D 907271 CDS YP_008354212.1 527328021 16429763 complement(711829..712704) 1 NC_021898.1 COG0142 Geranylgeranyl pyrophosphate synthase; dimethylallyltransferase 712704 16429763 CTRC966_03310 Chlamydia trachomatis RC-J/966 dimethylallyltransferase YP_008354212.1 711829 R 907271 CDS YP_008354213.1 527328022 16429764 complement(712760..713377) 1 NC_021898.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); glucosamine-1-phosphate acetyltransferase 713377 16429764 CTRC966_03315 Chlamydia trachomatis RC-J/966 glucosamine-1-phosphate acetyltransferase YP_008354213.1 712760 R 907271 CDS YP_008354214.1 527328023 16429765 complement(713430..714113) 1 NC_021898.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; CpxR 714113 16429765 CTRC966_03320 Chlamydia trachomatis RC-J/966 CpxR YP_008354214.1 713430 R 907271 CDS YP_008354215.1 527328024 16429766 714291..714545 1 NC_021898.1 hypothetical protein 714545 16429766 CTRC966_03325 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354215.1 714291 D 907271 CDS YP_008354216.1 527328025 16429768 complement(714726..716315) 1 NC_021898.1 COG1351 Predicted alternative thymidylate synthase; hypothetical protein 716315 16429768 CTRC966_03330 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354216.1 714726 R 907271 CDS YP_008354217.1 527328026 16429769 complement(716364..716528) 1 NC_021898.1 hypothetical protein 716528 16429769 CTRC966_03335 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354217.1 716364 R 907271 CDS YP_008354218.1 527328027 16429770 716613..717629 1 NC_021898.1 COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 717629 16429770 CTRC966_03340 Chlamydia trachomatis RC-J/966 delta-aminolevulinic acid dehydratase YP_008354218.1 716613 D 907271 CDS YP_008354219.1 527328028 16429771 complement(717655..719052) 1 NC_021898.1 COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA; Na(+)-translocating NADH-quinone reductase subunit A 719052 16429771 CTRC966_03345 Chlamydia trachomatis RC-J/966 Na(+)-translocating NADH-quinone reductase subunit A YP_008354219.1 717655 R 907271 CDS YP_008354220.1 527328029 16429772 complement(719074..719508) 1 NC_021898.1 hypothetical protein 719508 16429772 CTRC966_03350 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354220.1 719074 R 907271 CDS YP_008354221.1 527328030 16429773 719622..721769 1 NC_021898.1 COG1747 Uncharacterized N-terminal domain of the transcription elongation factor GreA; transcript cleavage factor/unknown domain fusion protein 721769 16429773 CTRC966_03355 Chlamydia trachomatis RC-J/966 transcript cleavage factor/unknown domain fusion protein YP_008354221.1 719622 D 907271 CDS YP_008354222.1 527328031 16429775 721957..723159 1 NC_021898.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase 723159 16429775 CTRC966_03360 Chlamydia trachomatis RC-J/966 aromatic amino acid aminotransferase YP_008354222.1 721957 D 907271 CDS YP_008354223.1 527328032 16429776 723134..724144 1 NC_021898.1 COG1792 Cell shape-determining protein; rod shape-determining protein MreC 724144 16429776 CTRC966_03365 Chlamydia trachomatis RC-J/966 rod shape-determining protein MreC YP_008354223.1 723134 D 907271 CDS YP_008354224.1 527328033 16429777 complement(724160..727240) 1 NC_021898.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); exodeoxyribonuclease V beta chain 727240 16429777 CTRC966_03370 Chlamydia trachomatis RC-J/966 exodeoxyribonuclease V beta chain YP_008354224.1 724160 R 907271 CDS YP_008354225.1 527328034 16429778 complement(727242..730256) 1 NC_021898.1 COG1330 Exonuclease V gamma subunit; exodeoxyribonuclease V gamma chain 730256 16429778 CTRC966_03375 Chlamydia trachomatis RC-J/966 exodeoxyribonuclease V gamma chain YP_008354225.1 727242 R 907271 CDS YP_008354226.1 527328035 16429779 730269..731948 1 NC_021898.1 COG0477 Permeases of the major facilitator superfamily; putative membrane efflux protein 731948 16429779 CTRC966_03380 Chlamydia trachomatis RC-J/966 putative membrane efflux protein YP_008354226.1 730269 D 907271 CDS YP_008354227.1 527328036 16429780 complement(731968..732783) 1 NC_021898.1 hypothetical protein 732783 16429780 CTRC966_03385 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354227.1 731968 R 907271 CDS YP_008354228.1 527328037 16429781 733678..736251 1 NC_021898.1 COG0550 Topoisomerase IA; DNA topoisomerase I/SWI domain fusion protein 736251 16429781 CTRC966_03390 Chlamydia trachomatis RC-J/966 DNA topoisomerase I/SWI domain fusion protein YP_008354228.1 733678 D 907271 CDS YP_008354229.1 527328038 16429782 complement(736281..737285) 1 NC_021898.1 COG0042 tRNA-dihydrouridine synthase; putative oxidoreductase 737285 16429782 CTRC966_03395 Chlamydia trachomatis RC-J/966 putative oxidoreductase YP_008354229.1 736281 R 907271 CDS YP_008354230.1 527328039 16429783 complement(737264..737560) 1 NC_021898.1 COG0762 Predicted integral membrane protein; integral membrane protein 737560 16429783 CTRC966_03400 Chlamydia trachomatis RC-J/966 integral membrane protein YP_008354230.1 737264 R 907271 CDS YP_008354231.1 527328040 16429784 737661..739040 1 NC_021898.1 hypothetical protein 739040 16429784 CTRC966_03405 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354231.1 737661 D 907271 CDS YP_008354232.1 527328041 16429785 739040..739618 1 NC_021898.1 hypothetical protein 739618 16429785 CTRC966_03410 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354232.1 739040 D 907271 CDS YP_008354233.1 527328042 16429786 739609..740883 1 NC_021898.1 COG2849 Uncharacterized protein conserved in bacteria; hypothetical protein 740883 16429786 CTRC966_03415 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354233.1 739609 D 907271 CDS YP_008354234.1 527328043 16429787 740886..741422 1 NC_021898.1 COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 741422 16429787 CTRC966_03420 Chlamydia trachomatis RC-J/966 5-formyltetrahydrofolate cyclo-ligase YP_008354234.1 740886 D 907271 CDS YP_008354235.1 527328044 16429788 complement(741419..741637) 1 NC_021898.1 hypothetical protein 741637 16429788 CTRC966_03425 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354235.1 741419 R 907271 CDS YP_008354236.1 527328045 16429789 741683..742741 1 NC_021898.1 COG0468 RecA/RadA recombinase; recombinase A 742741 recA 16429789 recA Chlamydia trachomatis RC-J/966 recombinase A YP_008354236.1 741683 D 907271 CDS YP_008354237.1 527328046 16429790 743027..744853 1 NC_021898.1 putative exported lipoprotein 744853 16429790 CTRC966_03435 Chlamydia trachomatis RC-J/966 putative exported lipoprotein YP_008354237.1 743027 D 907271 CDS YP_008354238.1 527328047 16429791 744850..746340 1 NC_021898.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; exodeoxyribonuclease V alpha chain 746340 16429791 CTRC966_03440 Chlamydia trachomatis RC-J/966 exodeoxyribonuclease V alpha chain YP_008354238.1 744850 D 907271 CDS YP_008354239.1 527328048 16429792 746406..746585 1 NC_021898.1 hypothetical protein 746585 16429792 CTRC966_03445 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354239.1 746406 D 907271 CDS YP_008354240.1 527328049 16429793 complement(746686..747405) 1 NC_021898.1 COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein 747405 16429793 CTRC966_03450 Chlamydia trachomatis RC-J/966 ABC transporter ATP-binding protein YP_008354240.1 746686 R 907271 CDS YP_008354241.1 527328050 16429794 complement(747414..747902) 1 NC_021898.1 hypothetical protein 747902 16429794 CTRC966_03455 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354241.1 747414 R 907271 CDS YP_008354242.1 527328051 16429795 complement(747899..748708) 1 NC_021898.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 748708 16429795 CTRC966_03460 Chlamydia trachomatis RC-J/966 2-dehydro-3-deoxyphosphooctonate aldolase YP_008354242.1 747899 R 907271 CDS YP_008354243.1 527328052 16429797 749194..749487 1 NC_021898.1 hypothetical protein 749487 16429797 CTRC966_03470 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354243.1 749194 D 907271 CDS YP_008354244.1 527328053 16429798 749487..749804 1 NC_021898.1 hypothetical protein 749804 16429798 CTRC966_03475 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354244.1 749487 D 907271 CDS YP_008354245.1 527328054 16429799 749886..750893 1 NC_021898.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; ribosomal large subunit pseudouridine synthase D 750893 16429799 CTRC966_03480 Chlamydia trachomatis RC-J/966 ribosomal large subunit pseudouridine synthase D YP_008354245.1 749886 D 907271 CDS YP_008354246.1 527328055 16429800 750993..751229 1 NC_021898.1 COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein 751229 16429800 CTRC966_03485 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354246.1 750993 D 907271 CDS YP_008354247.1 527328056 16429801 complement(751368..752840) 1 NC_021898.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA topoisomerase IV subunit A 752840 16429801 CTRC966_03490 Chlamydia trachomatis RC-J/966 DNA topoisomerase IV subunit A YP_008354247.1 751368 R 907271 CDS YP_008354248.1 527328057 16429802 complement(752855..754672) 1 NC_021898.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA topoisomerase IV subunit B 754672 16429802 CTRC966_03495 Chlamydia trachomatis RC-J/966 DNA topoisomerase IV subunit B YP_008354248.1 752855 R 907271 CDS YP_008354249.1 527328058 16429803 755052..756059 1 NC_021898.1 COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase 756059 hemA 16429803 hemA Chlamydia trachomatis RC-J/966 glutamyl-tRNA reductase YP_008354249.1 755052 D 907271 CDS YP_008354250.1 527328059 16429804 756777..757178 1 NC_021898.1 COG1072 Panthothenate kinase; Type III secretion system chaperone 757178 16429804 CTRC966_03505 Chlamydia trachomatis RC-J/966 Type III secretion system chaperone YP_008354250.1 756777 D 907271 CDS YP_008354251.1 527328060 16429805 757182..759671 1 NC_021898.1 COG1716 FOG: FHA domain; phosphopeptide binding protein ( to be a TTSS protein) 759671 16429805 CTRC966_03510 Chlamydia trachomatis RC-J/966 phosphopeptide binding protein ( to be a TTSS protein) YP_008354251.1 757182 D 907271 CDS YP_008354252.1 527328061 16429806 759715..759966 1 NC_021898.1 hypothetical protein 759966 16429806 CTRC966_03515 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354252.1 759715 D 907271 CDS YP_008354253.1 527328062 16429807 759993..760244 1 NC_021898.1 hypothetical protein 760244 16429807 CTRC966_03520 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354253.1 759993 D 907271 CDS YP_008354254.1 527328063 16429808 760263..760712 1 NC_021898.1 COG0457 FOG: TPR repeat; hypothetical protein 760712 16429808 CTRC966_03525 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354254.1 760263 D 907271 CDS YP_008354255.1 527328064 16429809 760732..761403 1 NC_021898.1 hypothetical protein 761403 16429809 CTRC966_03530 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354255.1 760732 D 907271 CDS YP_008354256.1 527328065 16429810 761405..762733 1 NC_021898.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; type III secretion system ATPase 762733 16429810 CTRC966_03535 Chlamydia trachomatis RC-J/966 type III secretion system ATPase YP_008354256.1 761405 D 907271 CDS YP_008354257.1 527328066 16429811 762756..763262 1 NC_021898.1 hypothetical protein 763262 16429811 CTRC966_03540 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354257.1 762756 D 907271 CDS YP_008354258.1 527328067 16429812 763266..764117 1 NC_021898.1 COG1879 ABC-type sugar transport system, periplasmic component; hypothetical protein 764117 16429812 CTRC966_03545 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354258.1 763266 D 907271 CDS YP_008354259.1 527328068 16429813 764127..765248 1 NC_021898.1 COG1886 Flagellar motor switch/type III secretory pathway protein; type III secretion system protein 765248 16429813 CTRC966_03550 Chlamydia trachomatis RC-J/966 type III secretion system protein YP_008354259.1 764127 D 907271 CDS YP_008354260.1 527328069 16429814 765383..766855 1 NC_021898.1 COG0515 Serine/threonine protein kinase; putative serine/threonine-protein kinase (TTSS effector protein) 766855 16429814 CTRC966_03555 Chlamydia trachomatis RC-J/966 putative serine/threonine-protein kinase (TTSS effector protein) YP_008354260.1 765383 D 907271 CDS YP_008354261.1 527328070 16429815 766852..769617 1 NC_021898.1 COG1450 Type II secretory pathway, component PulD; Yop proteins translocation protein C/general secretion pathway protein 769617 16429815 CTRC966_03560 Chlamydia trachomatis RC-J/966 Yop proteins translocation protein C/general secretion pathway protein YP_008354261.1 766852 D 907271 CDS YP_008354262.1 527328071 16429817 complement(769930..771000) 1 NC_021898.1 COG3869 Arginine kinase; ATP:guanido phosphotransferase 771000 16429817 CTRC966_03565 Chlamydia trachomatis RC-J/966 ATP:guanido phosphotransferase YP_008354262.1 769930 R 907271 CDS YP_008354263.1 527328072 16429818 complement(770990..771511) 1 NC_021898.1 COG3880 Uncharacterized protein with conserved CXXC pairs; hypothetical protein 771511 16429818 CTRC966_03570 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354263.1 770990 R 907271 CDS YP_008354264.1 527328073 16429819 771503..771625 1 NC_021898.1 hypothetical protein 771625 16429819 CTRC966_03575 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354264.1 771503 D 907271 CDS YP_008354265.1 527328074 16429822 complement(771882..772421) 1 NC_021898.1 COG0233 Ribosome recycling factor; ribosome recycling factor 772421 frr 16429822 frr Chlamydia trachomatis RC-J/966 ribosome recycling factor YP_008354265.1 771882 R 907271 CDS YP_008354266.1 527328075 16429823 complement(772418..773155) 1 NC_021898.1 COG0528 Uridylate kinase; uridylate kinase 773155 pyrH 16429823 pyrH Chlamydia trachomatis RC-J/966 uridylate kinase YP_008354266.1 772418 R 907271 CDS YP_008354267.1 527328076 16429824 complement(773168..774016) 1 NC_021898.1 COG0264 Translation elongation factor Ts; elongation factor Ts 774016 tsf 16429824 tsf Chlamydia trachomatis RC-J/966 elongation factor Ts YP_008354267.1 773168 R 907271 CDS YP_008354268.1 527328077 16429825 complement(774013..774861) 1 NC_021898.1 COG0052 Ribosomal protein S2; 30S ribosomal protein S2 774861 rpsB 16429825 rpsB Chlamydia trachomatis RC-J/966 30S ribosomal protein S2 YP_008354268.1 774013 R 907271 CDS YP_008354269.1 527328078 16429827 complement(775230..776423) 1 NC_021898.1 major outer membrane protein 776423 16429827 CTRC966_03600 Chlamydia trachomatis RC-J/966 major outer membrane protein YP_008354269.1 775230 R 907271 CDS YP_008354270.1 527328079 16429828 777032..780274 1 NC_021898.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 780274 16429828 CTRC966_03605 Chlamydia trachomatis RC-J/966 penicillin-binding protein YP_008354270.1 777032 D 907271 CDS YP_008354271.1 527328080 16429829 780338..781345 1 NC_021898.1 COG0457 FOG: TPR repeat; tetratricopeptide repeat protein 781345 16429829 CTRC966_03610 Chlamydia trachomatis RC-J/966 tetratricopeptide repeat protein YP_008354271.1 780338 D 907271 CDS YP_008354272.1 527328081 16429830 complement(781549..781689) 1 NC_021898.1 hypothetical protein 781689 16429830 CTRC966_03615 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354272.1 781549 R 907271 CDS YP_008354273.1 527328082 16429831 781688..783139 1 NC_021898.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; cysteine desulfurase activator complex subunit SufB 783139 16429831 CTRC966_03620 Chlamydia trachomatis RC-J/966 cysteine desulfurase activator complex subunit SufB YP_008354273.1 781688 D 907271 CDS YP_008354274.1 527328083 16429832 783142..783909 1 NC_021898.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component; ABC transporter ATP-binding protein 783909 16429832 CTRC966_03625 Chlamydia trachomatis RC-J/966 ABC transporter ATP-binding protein YP_008354274.1 783142 D 907271 CDS YP_008354275.1 527328084 16429833 783913..785100 1 NC_021898.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; ABC transporter membrane protein 785100 16429833 CTRC966_03630 Chlamydia trachomatis RC-J/966 ABC transporter membrane protein YP_008354275.1 783913 D 907271 CDS YP_008354276.1 527328085 16429834 785093..786298 1 NC_021898.1 COG0520 Selenocysteine lyase; cysteine desulfurase 786298 16429834 CTRC966_03635 Chlamydia trachomatis RC-J/966 cysteine desulfurase YP_008354276.1 785093 D 907271 CDS YP_008354277.1 527328086 16429835 786434..787279 1 NC_021898.1 COG1475 Predicted transcriptional regulators; putative chromosome partitioning protein 787279 16429835 CTRC966_03640 Chlamydia trachomatis RC-J/966 putative chromosome partitioning protein YP_008354277.1 786434 D 907271 CDS YP_008354278.1 527328087 16429836 complement(787271..788101) 1 NC_021898.1 COG4608 ABC-type oligopeptide transport system, ATPase component; ABC transport protein, ATPase component 788101 16429836 CTRC966_03645 Chlamydia trachomatis RC-J/966 ABC transport protein, ATPase component YP_008354278.1 787271 R 907271 CDS YP_008354279.1 527328088 16429837 complement(788094..789059) 1 NC_021898.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; peptide ABC transporter ATPase 789059 16429837 CTRC966_03650 Chlamydia trachomatis RC-J/966 peptide ABC transporter ATPase YP_008354279.1 788094 R 907271 CDS YP_008354280.1 527328089 16429838 789220..789894 1 NC_021898.1 COG1392 Phosphate transport regulator (distant homolog of PhoU); hypothetical protein 789894 16429838 CTRC966_03655 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354280.1 789220 D 907271 CDS YP_008354281.1 527328090 16429839 789897..791177 1 NC_021898.1 COG0306 Phosphate/sulphate permeases; inorganic phosphate transporter 791177 16429839 CTRC966_03660 Chlamydia trachomatis RC-J/966 inorganic phosphate transporter YP_008354281.1 789897 D 907271 CDS YP_008354282.1 527328091 16429840 791305..792516 1 NC_021898.1 COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase 792516 pgk 16429840 pgk Chlamydia trachomatis RC-J/966 phosphoglycerate kinase YP_008354282.1 791305 D 907271 CDS YP_008354283.1 527328092 16429841 792775..793746 1 NC_021898.1 hypothetical protein 793746 16429841 CTRC966_03670 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354283.1 792775 D 907271 CDS YP_008354284.1 527328093 16429842 793797..794993 1 NC_021898.1 hypothetical protein 794993 16429842 CTRC966_03675 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354284.1 793797 D 907271 CDS YP_008354285.1 527328094 16429843 795079..796257 1 NC_021898.1 hypothetical protein 796257 16429843 CTRC966_03680 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354285.1 795079 D 907271 CDS YP_008354286.1 527328095 16429844 complement(796254..796889) 1 NC_021898.1 COG0177 Predicted EndoIII-related endonuclease; endonuclease III 796889 16429844 CTRC966_03685 Chlamydia trachomatis RC-J/966 endonuclease III YP_008354286.1 796254 R 907271 CDS YP_008354287.1 527328096 16429845 complement(796896..798230) 1 NC_021898.1 COG0486 Predicted GTPase; tRNA modification GTPase TrmE 798230 trmE 16429845 trmE Chlamydia trachomatis RC-J/966 tRNA modification GTPase TrmE YP_008354287.1 796896 R 907271 CDS YP_008354288.1 527328097 16429846 798497..799402 1 NC_021898.1 COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 799402 16429846 CTRC966_03695 Chlamydia trachomatis RC-J/966 phosphatidylserine decarboxylase YP_008354288.1 798497 D 907271 CDS YP_008354289.1 527328098 16429847 799467..800792 1 NC_021898.1 COG0457 FOG: TPR repeat; hypothetical protein 800792 16429847 CTRC966_03700 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354289.1 799467 D 907271 CDS YP_008354290.1 527328099 16429848 801051..803960 1 NC_021898.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 803960 secA 16429848 secA Chlamydia trachomatis RC-J/966 preprotein translocase subunit SecA YP_008354290.1 801051 D 907271 CDS YP_008354291.1 527328100 16429849 complement(804054..804581) 1 NC_021898.1 COG0556 Helicase subunit of the DNA excision repair complex; hypothetical protein 804581 16429849 CTRC966_03710 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354291.1 804054 R 907271 CDS YP_008354292.1 527328101 16429850 complement(804658..806130) 1 NC_021898.1 COG1160 Predicted GTPases; GTP-binding protein Der 806130 16429850 CTRC966_03715 Chlamydia trachomatis RC-J/966 GTP-binding protein Der YP_008354292.1 804658 R 907271 CDS YP_008354293.1 527328102 16429851 complement(806246..807478) 1 NC_021898.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; polyA polymerase 807478 16429851 CTRC966_03720 Chlamydia trachomatis RC-J/966 polyA polymerase YP_008354293.1 806246 R 907271 CDS YP_008354294.1 527328103 16429852 complement(807493..808752) 1 NC_021898.1 COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX 808752 clpX 16429852 clpX Chlamydia trachomatis RC-J/966 ATP-dependent protease ATP-binding subunit ClpX YP_008354294.1 807493 R 907271 CDS YP_008354295.1 527328104 16429853 complement(808762..809373) 1 NC_021898.1 COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit 809373 clpP 16429853 clpP Chlamydia trachomatis RC-J/966 ATP-dependent Clp protease proteolytic subunit YP_008354295.1 808762 R 907271 CDS YP_008354296.1 527328105 16429854 complement(809540..810868) 1 NC_021898.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor 810868 tig 16429854 tig Chlamydia trachomatis RC-J/966 trigger factor YP_008354296.1 809540 R 907271 CDS YP_008354297.1 527328106 16429856 complement(810990..811187) 1 NC_021898.1 hypothetical protein 811187 16429856 CTRC966_03740 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354297.1 810990 R 907271 CDS YP_008354298.1 527328107 16429857 811226..814717 1 NC_021898.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family; SWF/SNF family helicase 814717 16429857 CTRC966_03745 Chlamydia trachomatis RC-J/966 SWF/SNF family helicase YP_008354298.1 811226 D 907271 CDS YP_008354299.1 527328108 16429858 814722..815822 1 NC_021898.1 COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB 815822 16429858 CTRC966_03750 Chlamydia trachomatis RC-J/966 rod shape-determining protein MreB YP_008354299.1 814722 D 907271 CDS YP_008354300.1 527328109 16429859 815819..817618 1 NC_021898.1 COG1274 Phosphoenolpyruvate carboxykinase (GTP); phosphoenolpyruvate carboxykinase 817618 16429859 CTRC966_03755 Chlamydia trachomatis RC-J/966 phosphoenolpyruvate carboxykinase YP_008354300.1 815819 D 907271 CDS YP_008354301.1 527328110 16429860 817730..820033 1 NC_021898.1 hypothetical protein 820033 16429860 CTRC966_03760 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354301.1 817730 D 907271 CDS YP_008354302.1 527328111 16429861 820060..821232 1 NC_021898.1 hypothetical protein 821232 16429861 CTRC966_03765 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354302.1 820060 D 907271 CDS YP_008354303.1 527328112 16429862 complement(821298..822320) 1 NC_021898.1 outer membrane protein B 822320 16429862 CTRC966_03770 Chlamydia trachomatis RC-J/966 outer membrane protein B YP_008354303.1 821298 R 907271 CDS YP_008354304.1 527328113 16429863 complement(822454..823458) 1 NC_021898.1 COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 823458 gpsA 16429863 gpsA Chlamydia trachomatis RC-J/966 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_008354304.1 822454 R 907271 CDS YP_008354305.1 527328114 16429864 complement(823455..824822) 1 NC_021898.1 COG4284 UDP-glucose pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 824822 16429864 CTRC966_03780 Chlamydia trachomatis RC-J/966 UDP-N-acetylglucosamine pyrophosphorylase YP_008354305.1 823455 R 907271 CDS YP_008354306.1 527328115 16429865 complement(824834..825199) 1 NC_021898.1 hypothetical protein 825199 16429865 CTRC966_03785 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354306.1 824834 R 907271 CDS YP_008354307.1 527328116 16429866 complement(825192..826496) 1 NC_021898.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; type III secretion system ATPase 826496 16429866 CTRC966_03790 Chlamydia trachomatis RC-J/966 type III secretion system ATPase YP_008354307.1 825192 R 907271 CDS YP_008354308.1 527328117 16429867 complement(826570..827094) 1 NC_021898.1 hypothetical protein 827094 16429867 CTRC966_03795 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354308.1 826570 R 907271 CDS YP_008354309.1 527328118 16429868 complement(827099..828103) 1 NC_021898.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; type III secretion system protein 828103 16429868 CTRC966_03800 Chlamydia trachomatis RC-J/966 type III secretion system protein YP_008354309.1 827099 R 907271 CDS YP_008354310.1 527328119 16429869 828195..828302 1 NC_021898.1 hypothetical protein 828302 16429869 CTRC966_03805 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354310.1 828195 D 907271 CDS YP_008354311.1 527328120 16429870 complement(828377..829159) 1 NC_021898.1 COG0822 NifU homolog involved in Fe-S cluster formation; hypothetical protein 829159 16429870 CTRC966_03810 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354311.1 828377 R 907271 CDS YP_008354312.1 527328121 16429871 complement(829156..830310) 1 NC_021898.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 830310 16429871 CTRC966_03815 Chlamydia trachomatis RC-J/966 cysteine desulfurase YP_008354312.1 829156 R 907271 CDS YP_008354313.1 527328122 16429872 complement(830265..830945) 1 NC_021898.1 COG0588 Phosphoglycerate mutase 1; phosphoglyceromutase 830945 16429872 CTRC966_03820 Chlamydia trachomatis RC-J/966 phosphoglyceromutase YP_008354313.1 830265 R 907271 CDS YP_008354314.1 527328123 16429873 complement(830942..831049) 1 NC_021898.1 hypothetical protein 831049 16429873 CTRC966_03825 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354314.1 830942 R 907271 CDS YP_008354315.1 527328124 16429874 831240..831965 1 NC_021898.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; ribosomal large subunit pseudouridine synthase B 831965 16429874 CTRC966_03830 Chlamydia trachomatis RC-J/966 ribosomal large subunit pseudouridine synthase B YP_008354315.1 831240 D 907271 CDS YP_008354316.1 527328125 16429875 832084..832608 1 NC_021898.1 hypothetical protein 832608 16429875 CTRC966_03835 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354316.1 832084 D 907271 CDS YP_008354317.1 527328126 16429876 832635..833189 1 NC_021898.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase 833189 16429876 CTRC966_03840 Chlamydia trachomatis RC-J/966 biotin--protein ligase YP_008354317.1 832635 D 907271 CDS YP_008354318.1 527328127 16429877 complement(833196..834335) 1 NC_021898.1 COG0772 Bacterial cell division membrane protein; cell cycle protein 834335 16429877 CTRC966_03845 Chlamydia trachomatis RC-J/966 cell cycle protein YP_008354318.1 833196 R 907271 CDS YP_008354319.1 527328128 16429878 complement(834427..836406) 1 NC_021898.1 COG2217 Cation transport ATPase; cation transporting ATPase 836406 16429878 CTRC966_03850 Chlamydia trachomatis RC-J/966 cation transporting ATPase YP_008354319.1 834427 R 907271 CDS YP_008354320.1 527328129 16429879 complement(836430..837176) 1 NC_021898.1 COG1814 Uncharacterized membrane protein; putative integral membrane protein 837176 16429879 CTRC966_03855 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354320.1 836430 R 907271 CDS YP_008354321.1 527328130 16429880 complement(837213..838499) 1 NC_021898.1 COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase 838499 16429880 CTRC966_03860 Chlamydia trachomatis RC-J/966 seryl-tRNA synthetase YP_008354321.1 837213 R 907271 CDS YP_008354322.1 527328131 16429881 838541..839668 1 NC_021898.1 COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) 839668 16429881 CTRC966_03865 Chlamydia trachomatis RC-J/966 riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) YP_008354322.1 838541 D 907271 CDS YP_008354323.1 527328132 16429882 839778..841052 1 NC_021898.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 841052 16429882 CTRC966_03870 Chlamydia trachomatis RC-J/966 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_008354323.1 839778 D 907271 CDS YP_008354324.1 527328133 16429883 841021..841494 1 NC_021898.1 COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase 841494 ribH 16429883 ribH Chlamydia trachomatis RC-J/966 6,7-dimethyl-8-ribityllumazine synthase YP_008354324.1 841021 D 907271 CDS YP_008354325.1 527328134 16429884 complement(841545..842891) 1 NC_021898.1 hypothetical protein 842891 16429884 CTRC966_03880 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354325.1 841545 R 907271 CDS YP_008354326.1 527328135 16429885 843276..843941 1 NC_021898.1 putative lipoprotein 843941 16429885 CTRC966_03885 Chlamydia trachomatis RC-J/966 putative lipoprotein YP_008354326.1 843276 D 907271 CDS YP_008354327.1 527328136 16429886 844046..845413 1 NC_021898.1 COG1115 Na+/alanine symporter; Na(+)-linked D-alanine glycine permease 845413 16429886 CTRC966_03890 Chlamydia trachomatis RC-J/966 Na(+)-linked D-alanine glycine permease YP_008354327.1 844046 D 907271 CDS YP_008354328.1 527328137 16429887 845471..845923 1 NC_021898.1 COG1881 Phospholipid-binding protein; hypothetical protein 845923 16429887 CTRC966_03895 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354328.1 845471 D 907271 CDS YP_008354329.1 527328138 16429888 complement(845932..846591) 1 NC_021898.1 COG2940 Proteins containing SET domain; SET domain containing protein 846591 16429888 CTRC966_03900 Chlamydia trachomatis RC-J/966 SET domain containing protein YP_008354329.1 845932 R 907271 CDS YP_008354330.1 527328139 16429889 complement(846588..847376) 1 NC_021898.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; Zn-dependent hydrolase 847376 16429889 CTRC966_03905 Chlamydia trachomatis RC-J/966 Zn-dependent hydrolase YP_008354330.1 846588 R 907271 CDS YP_008354331.1 527328140 16429890 complement(847380..849779) 1 NC_021898.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein 849779 16429890 CTRC966_03910 Chlamydia trachomatis RC-J/966 cell division protein YP_008354331.1 847380 R 907271 CDS YP_008354332.1 527328141 16429892 complement(850137..850367) 1 NC_021898.1 hypothetical protein 850367 16429892 CTRC966_03920 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354332.1 850137 R 907271 CDS YP_008354333.1 527328142 16429896 complement(856051..857346) 1 NC_021898.1 COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF; Na(+)-translocating NADH-quinone reductase subunit F 857346 16429896 CTRC966_03925 Chlamydia trachomatis RC-J/966 Na(+)-translocating NADH-quinone reductase subunit F YP_008354333.1 856051 R 907271 CDS YP_008354334.1 527328143 16429897 complement(857489..857833) 1 NC_021898.1 COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 857833 yajC 16429897 yajC Chlamydia trachomatis RC-J/966 preprotein translocase subunit YajC YP_008354334.1 857489 R 907271 CDS YP_008354335.1 527328144 16429898 complement(857938..859128) 1 NC_021898.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; rRNA methyltransferase 859128 16429898 CTRC966_03935 Chlamydia trachomatis RC-J/966 rRNA methyltransferase YP_008354335.1 857938 R 907271 CDS YP_008354336.1 527328145 16429899 complement(859316..859693) 1 NC_021898.1 histone H1--like developmental protein 859693 16429899 CTRC966_03940 Chlamydia trachomatis RC-J/966 histone H1--like developmental protein YP_008354336.1 859316 R 907271 CDS YP_008354337.1 527328146 16429900 860089..862557 1 NC_021898.1 COG0457 FOG: TPR repeat; hypothetical protein 862557 16429900 CTRC966_03945 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354337.1 860089 D 907271 CDS YP_008354338.1 527328147 16429901 complement(862549..863823) 1 NC_021898.1 COG1232 Protoporphyrinogen oxidase; protoporphyrinogen oxidase 863823 16429901 CTRC966_03950 Chlamydia trachomatis RC-J/966 protoporphyrinogen oxidase YP_008354338.1 862549 R 907271 CDS YP_008354339.1 527328148 16429902 complement(863820..865193) 1 NC_021898.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 865193 16429902 CTRC966_03955 Chlamydia trachomatis RC-J/966 coproporphyrinogen III oxidase YP_008354339.1 863820 R 907271 CDS YP_008354340.1 527328149 16429903 complement(865166..866176) 1 NC_021898.1 COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 866176 hemE 16429903 hemE Chlamydia trachomatis RC-J/966 uroporphyrinogen decarboxylase YP_008354340.1 865166 R 907271 CDS YP_008354341.1 527328150 16429904 complement(866189..869428) 1 NC_021898.1 COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 869428 16429904 CTRC966_03965 Chlamydia trachomatis RC-J/966 transcription-repair coupling factor YP_008354341.1 866189 R 907271 CDS YP_008354342.1 527328151 16429905 complement(869404..872031) 1 NC_021898.1 COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase 872031 alaS 16429905 alaS Chlamydia trachomatis RC-J/966 alanyl-tRNA synthetase YP_008354342.1 869404 R 907271 CDS YP_008354343.1 527328152 16429906 complement(872181..872411) 1 NC_021898.1 hypothetical protein 872411 16429906 CTRC966_03975 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354343.1 872181 R 907271 CDS YP_008354344.1 527328153 16429910 877856..879856 1 NC_021898.1 COG0021 Transketolase; transketolase 879856 16429910 CTRC966_03980 Chlamydia trachomatis RC-J/966 transketolase YP_008354344.1 877856 D 907271 CDS YP_008354345.1 527328154 16429911 complement(879853..880722) 1 NC_021898.1 COG0775 Nucleoside phosphorylase; AMP nucleosidase 880722 16429911 CTRC966_03985 Chlamydia trachomatis RC-J/966 AMP nucleosidase YP_008354345.1 879853 R 907271 CDS YP_008354346.1 527328155 16429912 880774..880893 1 NC_021898.1 hypothetical protein 880893 16429912 CTRC966_03990 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354346.1 880774 D 907271 CDS YP_008354347.1 527328156 16429913 880942..881514 1 NC_021898.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 881514 16429913 CTRC966_03995 Chlamydia trachomatis RC-J/966 elongation factor P YP_008354347.1 880942 D 907271 CDS YP_008354348.1 527328157 16429914 complement(881530..881754) 1 NC_021898.1 hypothetical protein 881754 16429914 CTRC966_04000 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354348.1 881530 R 907271 CDS YP_008354349.1 527328158 16429915 complement(881801..882673) 1 NC_021898.1 COG1409 Predicted phosphohydrolases; hypothetical protein 882673 16429915 CTRC966_04005 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354349.1 881801 R 907271 CDS YP_008354350.1 527328159 16429916 complement(882754..884292) 1 NC_021898.1 COG0459 Chaperonin GroEL (HSP60 family); 60 kDa chaperonin GroEL 884292 16429916 CTRC966_04010 Chlamydia trachomatis RC-J/966 60 kDa chaperonin GroEL YP_008354350.1 882754 R 907271 CDS YP_008354351.1 527328160 16429918 884740..886092 1 NC_021898.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 886092 16429918 CTRC966_04015 Chlamydia trachomatis RC-J/966 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_008354351.1 884740 D 907271 CDS YP_008354352.1 527328161 16429919 886238..887248 1 NC_021898.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 887248 mraY 16429919 mraY Chlamydia trachomatis RC-J/966 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_008354352.1 886238 D 907271 CDS YP_008354353.1 527328162 16429920 887260..888510 1 NC_021898.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 888510 murD 16429920 murD Chlamydia trachomatis RC-J/966 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_008354353.1 887260 D 907271 CDS YP_008354354.1 527328163 16429921 888507..889244 1 NC_021898.1 COG1388 FOG: LysM repeat; muramidase 889244 16429921 CTRC966_04030 Chlamydia trachomatis RC-J/966 muramidase YP_008354354.1 888507 D 907271 CDS YP_008354355.1 527328164 16429922 889260..890417 1 NC_021898.1 COG0772 Bacterial cell division membrane protein; cell division protein FtsW 890417 16429922 CTRC966_04035 Chlamydia trachomatis RC-J/966 cell division protein FtsW YP_008354355.1 889260 D 907271 CDS YP_008354356.1 527328165 16429923 890326..891384 1 NC_021898.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 891384 murG 16429923 murG Chlamydia trachomatis RC-J/966 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_008354356.1 890326 D 907271 CDS YP_008354357.1 527328166 16429924 891389..893800 1 NC_021898.1 COG0773 UDP-N-acetylmuramate-alanine ligase; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase 893800 16429924 CTRC966_04045 Chlamydia trachomatis RC-J/966 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase YP_008354357.1 891389 D 907271 CDS YP_008354358.1 527328167 16429925 complement(893837..894256) 1 NC_021898.1 COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein 894256 16429925 CTRC966_04050 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354358.1 893837 R 907271 CDS YP_008354359.1 527328168 16429926 complement(894414..895220) 1 NC_021898.1 hypothetical protein 895220 16429926 CTRC966_04055 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354359.1 894414 R 907271 CDS YP_008354360.1 527328169 16429927 895374..895706 1 NC_021898.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); anti-sigma F factor antagonist 895706 16429927 CTRC966_04060 Chlamydia trachomatis RC-J/966 anti-sigma F factor antagonist YP_008354360.1 895374 D 907271 CDS YP_008354361.1 527328170 16429928 895710..896729 1 NC_021898.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 896729 miaA 16429928 miaA Chlamydia trachomatis RC-J/966 tRNA delta(2)-isopentenylpyrophosphate transferase YP_008354361.1 895710 D 907271 CDS YP_008354362.1 527328171 16429929 complement(896734..897786) 1 NC_021898.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 897786 16429929 CTRC966_04070 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354362.1 896734 R 907271 CDS YP_008354363.1 527328172 16429930 897876..899558 1 NC_021898.1 hypothetical protein 899558 16429930 CTRC966_04075 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354363.1 897876 D 907271 CDS YP_008354364.1 527328173 16429931 900012..900371 1 NC_021898.1 COG0799 Uncharacterized homolog of plant Iojap protein; hypothetical protein 900371 16429931 CTRC966_04080 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354364.1 900012 D 907271 CDS YP_008354365.1 527328174 16429932 900382..901638 1 NC_021898.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II 901638 16429932 CTRC966_04085 Chlamydia trachomatis RC-J/966 3-oxoacyl-(acyl carrier protein) synthase II YP_008354365.1 900382 D 907271 CDS YP_008354366.1 527328175 16429933 901635..902087 1 NC_021898.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 902087 16429933 CTRC966_04090 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354366.1 901635 D 907271 CDS YP_008354367.1 527328176 16429934 complement(902168..902797) 1 NC_021898.1 COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 902797 16429934 CTRC966_04095 Chlamydia trachomatis RC-J/966 inorganic pyrophosphatase YP_008354367.1 902168 R 907271 CDS YP_008354368.1 527328177 16429935 complement(902822..902938) 1 NC_021898.1 hypothetical protein 902938 16429935 CTRC966_04100 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354368.1 902822 R 907271 CDS YP_008354369.1 527328178 16429936 903045..904085 1 NC_021898.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase; leucine dehydrogenase 904085 16429936 CTRC966_04105 Chlamydia trachomatis RC-J/966 leucine dehydrogenase YP_008354369.1 903045 D 907271 CDS YP_008354370.1 527328179 16429937 complement(904051..905079) 1 NC_021898.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; 3'(2'),5'-bisphosphate nucleotidase 905079 16429937 CTRC966_04110 Chlamydia trachomatis RC-J/966 3'(2'),5'-bisphosphate nucleotidase YP_008354370.1 904051 R 907271 CDS YP_008354371.1 527328180 16429938 905377..906138 1 NC_021898.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 906138 16429938 CTRC966_04115 Chlamydia trachomatis RC-J/966 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008354371.1 905377 D 907271 CDS YP_008354372.1 527328181 16429939 906146..907759 1 NC_021898.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long chain fatty acid--[acyl-carrier-protein] ligase 907759 16429939 CTRC966_04120 Chlamydia trachomatis RC-J/966 long chain fatty acid--[acyl-carrier-protein] ligase YP_008354372.1 906146 D 907271 CDS YP_008354373.1 527328182 16429940 907802..908935 1 NC_021898.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase 908935 16429940 CTRC966_04125 Chlamydia trachomatis RC-J/966 8-amino-7-oxononanoate synthase YP_008354373.1 907802 D 907271 CDS YP_008354374.1 527328183 16429941 complement(908854..911115) 1 NC_021898.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA 911115 16429941 CTRC966_04130 Chlamydia trachomatis RC-J/966 primosome assembly protein PriA YP_008354374.1 908854 R 907271 CDS YP_008354375.1 527328184 16429942 complement(911070..911759) 1 NC_021898.1 hypothetical protein 911759 16429942 CTRC966_04135 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354375.1 911070 R 907271 CDS YP_008354376.1 527328185 16429943 911915..912409 1 NC_021898.1 COG0526 Thiol-disulfide isomerase and thioredoxins; protein disulfide isomerase 912409 16429943 CTRC966_04140 Chlamydia trachomatis RC-J/966 protein disulfide isomerase YP_008354376.1 911915 D 907271 CDS YP_008354377.1 527328186 16429944 912641..914221 1 NC_021898.1 COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 914221 lysS 16429944 lysS Chlamydia trachomatis RC-J/966 lysyl-tRNA synthetase YP_008354377.1 912641 D 907271 CDS YP_008354378.1 527328187 16429945 complement(914218..915711) 1 NC_021898.1 COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 915711 cysS 16429945 cysS Chlamydia trachomatis RC-J/966 cysteinyl-tRNA synthetase YP_008354378.1 914218 R 907271 CDS YP_008354379.1 527328188 16429946 complement(915776..915946) 1 NC_021898.1 hypothetical protein 915946 16429946 CTRC966_04155 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354379.1 915776 R 907271 CDS YP_008354380.1 527328189 16429947 915964..917013 1 NC_021898.1 COG0526 Thiol-disulfide isomerase and thioredoxins; hypothetical protein 917013 16429947 CTRC966_04160 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354380.1 915964 D 907271 CDS YP_008354381.1 527328190 16429948 complement(917091..917453) 1 NC_021898.1 COG0594 RNase P protein component; ribonuclease P 917453 rnpA 16429948 rnpA Chlamydia trachomatis RC-J/966 ribonuclease P YP_008354381.1 917091 R 907271 CDS YP_008354382.1 527328191 16429949 918080..918217 1 NC_021898.1 COG0257 Ribosomal protein L36; 50S ribosomal protein L36 918217 rpmJ 16429949 rpmJ Chlamydia trachomatis RC-J/966 50S ribosomal protein L36 YP_008354382.1 918080 D 907271 CDS YP_008354383.1 527328192 16429950 918241..918546 1 NC_021898.1 COG0199 Ribosomal protein S14; 30S ribosomal protein S14 918546 rpsN 16429950 rpsN Chlamydia trachomatis RC-J/966 30S ribosomal protein S14 YP_008354383.1 918241 D 907271 CDS YP_008354384.1 527328193 16429951 complement(918580..918963) 1 NC_021898.1 hypothetical protein 918963 16429951 CTRC966_04180 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354384.1 918580 R 907271 CDS YP_008354385.1 527328194 16429952 918941..919132 1 NC_021898.1 hypothetical protein 919132 16429952 CTRC966_04185 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354385.1 918941 D 907271 CDS YP_008354386.1 527328195 16429953 complement(919202..919453) 1 NC_021898.1 putative integral membrane protein 919453 16429953 CTRC966_04190 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354386.1 919202 R 907271 CDS YP_008354387.1 527328196 16429954 919733..920227 1 NC_021898.1 COG1302 Uncharacterized protein conserved in bacteria; hypothetical protein 920227 16429954 CTRC966_04195 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354387.1 919733 D 907271 CDS YP_008354388.1 527328197 16429955 complement(920273..922069) 1 NC_021898.1 COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 922069 uvrC 16429955 uvrC Chlamydia trachomatis RC-J/966 excinuclease ABC subunit C YP_008354388.1 920273 R 907271 CDS YP_008354389.1 527328198 16429956 complement(922094..924556) 1 NC_021898.1 COG0249 Mismatch repair ATPase (MutS family); DNA mismatch repair protein MutS 924556 16429956 CTRC966_04205 Chlamydia trachomatis RC-J/966 DNA mismatch repair protein MutS YP_008354389.1 922094 R 907271 CDS YP_008354390.1 527328199 16429957 924619..924843 1 NC_021898.1 hypothetical protein 924843 16429957 CTRC966_04210 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354390.1 924619 D 907271 CDS YP_008354391.1 527328200 16429958 924889..926676 1 NC_021898.1 COG0358 DNA primase (bacterial type); DNA primase 926676 dnaG 16429958 dnaG Chlamydia trachomatis RC-J/966 DNA primase YP_008354391.1 924889 D 907271 CDS YP_008354392.1 527328201 16429959 926770..927048 1 NC_021898.1 hypothetical protein 927048 16429959 CTRC966_04220 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354392.1 926770 D 907271 CDS YP_008354393.1 527328202 16429960 927174..927665 1 NC_021898.1 hypothetical protein 927665 16429960 CTRC966_04225 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354393.1 927174 D 907271 CDS YP_008354394.1 527328203 16429961 complement(927748..930759) 1 NC_021898.1 COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase 930759 16429961 CTRC966_04230 Chlamydia trachomatis RC-J/966 glycyl-tRNA synthetase YP_008354394.1 927748 R 907271 CDS YP_008354395.1 527328204 16429962 931213..931821 1 NC_021898.1 COG0558 Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 931821 16429962 CTRC966_04235 Chlamydia trachomatis RC-J/966 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_008354395.1 931213 D 907271 CDS YP_008354396.1 527328205 16429963 complement(931828..933252) 1 NC_021898.1 COG0297 Glycogen synthase; glycogen synthase 933252 glgA 16429963 glgA Chlamydia trachomatis RC-J/966 glycogen synthase YP_008354396.1 931828 R 907271 CDS YP_008354397.1 527328206 16429965 933829..934386 1 NC_021898.1 COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc 934386 16429965 CTRC966_04245 Chlamydia trachomatis RC-J/966 50S ribosomal protein L25/general stress protein Ctc YP_008354397.1 933829 D 907271 CDS YP_008354398.1 527328207 16429966 934394..934933 1 NC_021898.1 COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 934933 16429966 CTRC966_04250 Chlamydia trachomatis RC-J/966 peptidyl-tRNA hydrolase YP_008354398.1 934394 D 907271 CDS YP_008354399.1 527328208 16429967 935071..935409 1 NC_021898.1 COG0360 Ribosomal protein S6; 30S ribosomal protein S6 935409 rpsF 16429967 rpsF Chlamydia trachomatis RC-J/966 30S ribosomal protein S6 YP_008354399.1 935071 D 907271 CDS YP_008354400.1 527328209 16429968 935426..935671 1 NC_021898.1 COG0238 Ribosomal protein S18; 30S ribosomal protein S18 935671 rpsR 16429968 rpsR Chlamydia trachomatis RC-J/966 30S ribosomal protein S18 YP_008354400.1 935426 D 907271 CDS YP_008354401.1 527328210 16429969 935692..936195 1 NC_021898.1 COG0359 Ribosomal protein L9; 50S ribosomal protein L9 936195 rplI 16429969 rplI Chlamydia trachomatis RC-J/966 50S ribosomal protein L9 YP_008354401.1 935692 D 907271 CDS YP_008354402.1 527328211 16429970 936259..937125 1 NC_021898.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 937125 16429970 CTRC966_04270 Chlamydia trachomatis RC-J/966 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_008354402.1 936259 D 907271 CDS YP_008354403.1 527328212 16429971 complement(937095..937298) 1 NC_021898.1 hypothetical protein 937298 16429971 CTRC966_04275 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354403.1 937095 R 907271 CDS YP_008354404.1 527328213 16429972 complement(937428..938780) 1 NC_021898.1 putative integral membrane protein 938780 16429972 CTRC966_04280 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354404.1 937428 R 907271 CDS YP_008354405.1 527328214 16429973 complement(938959..941829) 1 NC_021898.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like; exported insulinase/protease 941829 16429973 CTRC966_04285 Chlamydia trachomatis RC-J/966 exported insulinase/protease YP_008354405.1 938959 R 907271 CDS YP_008354406.1 527328215 16429974 complement(941881..942882) 1 NC_021898.1 glycerol-3-phosphate acyltransferase 942882 16429974 CTRC966_04290 Chlamydia trachomatis RC-J/966 glycerol-3-phosphate acyltransferase YP_008354406.1 941881 R 907271 CDS YP_008354407.1 527328216 16429975 complement(942895..944433) 1 NC_021898.1 COG1530 Ribonucleases G and E; ribonuclease G 944433 16429975 CTRC966_04295 Chlamydia trachomatis RC-J/966 ribonuclease G YP_008354407.1 942895 R 907271 CDS YP_008354408.1 527328217 16429976 complement(944703..944915) 1 NC_021898.1 hypothetical protein 944915 16429976 CTRC966_04300 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354408.1 944703 R 907271 CDS YP_008354409.1 527328218 16429977 944898..945317 1 NC_021898.1 hypothetical protein 945317 16429977 CTRC966_04305 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354409.1 944898 D 907271 CDS YP_008354410.1 527328219 16429978 945567..945746 1 NC_021898.1 COG0333 Ribosomal protein L32; 50S ribosomal protein L32 945746 rpmF 16429978 rpmF Chlamydia trachomatis RC-J/966 50S ribosomal protein L32 YP_008354410.1 945567 D 907271 CDS YP_008354411.1 527328220 16429979 945768..946733 1 NC_021898.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative glycerol-3-phosphate acyltransferase PlsX 946733 16429979 CTRC966_04315 Chlamydia trachomatis RC-J/966 putative glycerol-3-phosphate acyltransferase PlsX YP_008354411.1 945768 D 907271 CDS YP_008354412.1 527328221 16429980 946953..951545 1 NC_021898.1 polymorphic outer membrane protein 951545 16429980 CTRC966_04320 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008354412.1 946953 D 907271 CDS YP_008354413.1 527328222 16429981 complement(951618..951731) 1 NC_021898.1 hypothetical protein 951731 16429981 CTRC966_04325 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354413.1 951618 R 907271 CDS YP_008354414.1 527328223 16429982 complement(951664..951801) 1 NC_021898.1 hypothetical protein 951801 16429982 CTRC966_04330 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354414.1 951664 R 907271 CDS YP_008354415.1 527328224 16429983 951746..952540 1 NC_021898.1 hypothetical protein 952540 16429983 CTRC966_04335 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354415.1 951746 D 907271 CDS YP_008354416.1 527328225 16429984 complement(952624..952923) 1 NC_021898.1 COG4980 Gas vesicle protein; hypothetical protein 952923 16429984 CTRC966_04340 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354416.1 952624 R 907271 CDS YP_008354417.1 527328226 16429985 complement(952944..953327) 1 NC_021898.1 COG1338 Flagellar biosynthesis pathway, component FliP; hypothetical protein 953327 16429985 CTRC966_04345 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354417.1 952944 R 907271 CDS YP_008354418.1 527328227 16429986 953551..954927 1 NC_021898.1 COG1109 Phosphomannomutase; phosphoglucosamine mutase 954927 glmM 16429986 glmM Chlamydia trachomatis RC-J/966 phosphoglucosamine mutase YP_008354418.1 953551 D 907271 CDS YP_008354419.1 527328228 16429987 954938..956758 1 NC_021898.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 956758 16429987 CTRC966_04355 Chlamydia trachomatis RC-J/966 glucosamine--fructose-6-phosphate aminotransferase YP_008354419.1 954938 D 907271 CDS YP_008354420.1 527328229 16429988 956861..958057 1 NC_021898.1 COG0814 Amino acid permeases; tyrosine-specific transport protein 958057 16429988 CTRC966_04360 Chlamydia trachomatis RC-J/966 tyrosine-specific transport protein YP_008354420.1 956861 D 907271 CDS YP_008354421.1 527328230 16429989 958101..958229 1 NC_021898.1 hypothetical protein 958229 16429989 CTRC966_04365 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354421.1 958101 D 907271 CDS YP_008354422.1 527328231 16429990 958240..959433 1 NC_021898.1 COG0814 Amino acid permeases; tyrosine-specific transport protein 959433 16429990 CTRC966_04370 Chlamydia trachomatis RC-J/966 tyrosine-specific transport protein YP_008354422.1 958240 D 907271 CDS YP_008354423.1 527328232 16429991 959475..960191 1 NC_021898.1 COG0670 Integral membrane protein, interacts with FtsH; putative membrane transport protein 960191 16429991 CTRC966_04375 Chlamydia trachomatis RC-J/966 putative membrane transport protein YP_008354423.1 959475 D 907271 CDS YP_008354424.1 527328233 16429992 complement(960289..961143) 1 NC_021898.1 COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 961143 16429992 CTRC966_04380 Chlamydia trachomatis RC-J/966 signal recognition particle-docking protein FtsY YP_008354424.1 960289 R 907271 CDS YP_008354425.1 527328234 16429993 961213..962373 1 NC_021898.1 COG0045 Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta 962373 sucC 16429993 sucC Chlamydia trachomatis RC-J/966 succinyl-CoA synthetase subunit beta YP_008354425.1 961213 D 907271 CDS YP_008354426.1 527328235 16429994 962388..963263 1 NC_021898.1 COG0074 Succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 963263 16429994 CTRC966_04390 Chlamydia trachomatis RC-J/966 succinyl-CoA synthetase subunit alpha YP_008354426.1 962388 D 907271 CDS YP_008354427.1 527328236 16429995 963402..964895 1 NC_021898.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine protease 964895 16429995 CTRC966_04395 Chlamydia trachomatis RC-J/966 serine protease YP_008354427.1 963402 D 907271 CDS YP_008354428.1 527328237 16429996 965096..968020 1 NC_021898.1 COG1026 Predicted Zn-dependent peptidases, insulinase-like; metalloprotease-insulinase 968020 16429996 CTRC966_04400 Chlamydia trachomatis RC-J/966 metalloprotease-insulinase YP_008354428.1 965096 D 907271 CDS YP_008354429.1 527328238 16429997 complement(968034..969317) 1 NC_021898.1 COG1322 Uncharacterized protein conserved in bacteria; DNA recombination protein 969317 16429997 CTRC966_04405 Chlamydia trachomatis RC-J/966 DNA recombination protein YP_008354429.1 968034 R 907271 CDS YP_008354430.1 527328239 16429998 complement(969321..970112) 1 NC_021898.1 COG1183 Phosphatidylserine synthase; CDP-diacylglycerol--serine O-phosphatidyltransferase 970112 16429998 CTRC966_04410 Chlamydia trachomatis RC-J/966 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_008354430.1 969321 R 907271 CDS YP_008354431.1 527328240 16429999 970747..973890 1 NC_021898.1 COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha 973890 16429999 CTRC966_04415 Chlamydia trachomatis RC-J/966 ribonucleotide-diphosphate reductase subunit alpha YP_008354431.1 970747 D 907271 CDS YP_008354432.1 527328241 16430000 973928..974968 1 NC_021898.1 COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 974968 16430000 CTRC966_04420 Chlamydia trachomatis RC-J/966 ribonucleotide-diphosphate reductase subunit beta YP_008354432.1 973928 D 907271 CDS YP_008354433.1 527328242 16430001 975228..975902 1 NC_021898.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 975902 trmB 16430001 trmB Chlamydia trachomatis RC-J/966 tRNA (guanine-N(7)-)-methyltransferase YP_008354433.1 975228 D 907271 CDS YP_008354434.1 527328243 16430003 976018..976602 1 NC_021898.1 COG0500 SAM-dependent methyltransferases; putative SAM-dependent methyltransferase 976602 16430003 CTRC966_04430 Chlamydia trachomatis RC-J/966 putative SAM-dependent methyltransferase YP_008354434.1 976018 D 907271 CDS YP_008354435.1 527328244 16430004 complement(976599..977474) 1 NC_021898.1 COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase 977474 murB 16430004 murB Chlamydia trachomatis RC-J/966 UDP-N-acetylenolpyruvoylglucosamine reductase YP_008354435.1 976599 R 907271 CDS YP_008354436.1 527328245 16430005 977473..977610 1 NC_021898.1 hypothetical protein 977610 16430005 CTRC966_04440 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354436.1 977473 D 907271 CDS YP_008354437.1 527328246 16430006 complement(977607..978113) 1 NC_021898.1 COG0781 Transcription termination factor; transcription antitermination protein NusB 978113 nusB 16430006 nusB Chlamydia trachomatis RC-J/966 transcription antitermination protein NusB YP_008354437.1 977607 R 907271 CDS YP_008354438.1 527328247 16430007 978545..979105 1 NC_021898.1 COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 979105 infC 16430007 infC Chlamydia trachomatis RC-J/966 translation initiation factor IF-3 YP_008354438.1 978545 D 907271 CDS YP_008354439.1 527328248 16430008 979083..979277 1 NC_021898.1 COG0291 Ribosomal protein L35; 50S ribosomal protein L35 979277 rpmI 16430008 rpmI Chlamydia trachomatis RC-J/966 50S ribosomal protein L35 YP_008354439.1 979083 D 907271 CDS YP_008354440.1 527328249 16430009 979296..979667 1 NC_021898.1 COG0292 Ribosomal protein L20; 50S ribosomal protein L20 979667 rplT 16430009 rplT Chlamydia trachomatis RC-J/966 50S ribosomal protein L20 YP_008354440.1 979296 D 907271 CDS YP_008354441.1 527328250 16430010 979674..980702 1 NC_021898.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 980702 pheS 16430010 pheS Chlamydia trachomatis RC-J/966 phenylalanyl-tRNA synthetase subunit alpha YP_008354441.1 979674 D 907271 CDS YP_008354442.1 527328251 16430012 981013..982989 1 NC_021898.1 hypothetical protein 982989 16430012 CTRC966_04475 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354442.1 981013 D 907271 CDS YP_008354443.1 527328252 16429043 complement(982986..984086) 1 NC_021898.1 COG0795 Predicted permeases; putative membrane transport protein 984086 16429043 CTRC966_04480 Chlamydia trachomatis RC-J/966 putative membrane transport protein YP_008354443.1 982986 R 907271 CDS YP_008354444.1 527328253 16429044 complement(984089..985153) 1 NC_021898.1 COG0795 Predicted permeases; putative membrane transport protein 985153 16429044 CTRC966_04485 Chlamydia trachomatis RC-J/966 putative membrane transport protein YP_008354444.1 984089 R 907271 CDS YP_008354445.1 527328254 16429045 985251..986216 1 NC_021898.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase 986216 16429045 CTRC966_04490 Chlamydia trachomatis RC-J/966 tRNA(Ile)-lysidine synthase YP_008354445.1 985251 D 907271 CDS YP_008354446.1 527328255 16429046 986377..989118 1 NC_021898.1 COG0465 ATP-dependent Zn proteases; cell division protein 989118 16429046 CTRC966_04495 Chlamydia trachomatis RC-J/966 cell division protein YP_008354446.1 986377 D 907271 CDS YP_008354447.1 527328256 16429047 complement(989333..991420) 1 NC_021898.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase 991420 16429047 CTRC966_04500 Chlamydia trachomatis RC-J/966 polynucleotide phosphorylase/polyadenylase YP_008354447.1 989333 R 907271 CDS YP_008354448.1 527328257 16429048 complement(991449..991718) 1 NC_021898.1 COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 991718 rpsO 16429048 rpsO Chlamydia trachomatis RC-J/966 30S ribosomal protein S15 YP_008354448.1 991449 R 907271 CDS YP_008354449.1 527328258 16429049 991944..992435 1 NC_021898.1 COG0590 Cytosine/adenosine deaminases; cytosine deaminase 992435 16429049 CTRC966_04510 Chlamydia trachomatis RC-J/966 cytosine deaminase YP_008354449.1 991944 D 907271 CDS YP_008354450.1 527328259 16429050 992467..992685 1 NC_021898.1 hypothetical protein 992685 16429050 CTRC966_04515 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354450.1 992467 D 907271 CDS YP_008354451.1 527328260 16429051 complement(992657..993361) 1 NC_021898.1 putative integral membrane protein 993361 16429051 CTRC966_04520 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354451.1 992657 R 907271 CDS YP_008354452.1 527328261 16429052 complement(993496..994014) 1 NC_021898.1 hypothetical protein 994014 16429052 CTRC966_04525 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354452.1 993496 R 907271 CDS YP_008354453.1 527328262 16429053 993935..994030 1 NC_021898.1 hypothetical protein 994030 16429053 CTRC966_04530 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354453.1 993935 D 907271 CDS YP_008354454.1 527328263 16429054 complement(994027..994533) 1 NC_021898.1 hypothetical protein 994533 16429054 CTRC966_04535 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354454.1 994027 R 907271 CDS YP_008354455.1 527328264 16429055 complement(994561..995040) 1 NC_021898.1 hypothetical protein 995040 16429055 CTRC966_04540 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354455.1 994561 R 907271 CDS YP_008354456.1 527328265 16429056 995357..995545 1 NC_021898.1 hypothetical protein 995545 16429056 CTRC966_04545 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354456.1 995357 D 907271 CDS YP_008354457.1 527328266 16429057 995564..996781 1 NC_021898.1 putative integral membrane protein 996781 16429057 CTRC966_04550 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354457.1 995564 D 907271 CDS YP_008354458.1 527328267 16429058 complement(996738..997613) 1 NC_021898.1 COG0024 Methionine aminopeptidase; methionine aminopeptidase 997613 16429058 CTRC966_04555 Chlamydia trachomatis RC-J/966 methionine aminopeptidase YP_008354458.1 996738 R 907271 CDS YP_008354459.1 527328268 16429059 complement(997646..998287) 1 NC_021898.1 COG2095 Multiple antibiotic transporter; putative integral membrane protein 998287 16429059 CTRC966_04560 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354459.1 997646 R 907271 CDS YP_008354460.1 527328269 16429060 complement(998304..998903) 1 NC_021898.1 COG2095 Multiple antibiotic transporter; putative integral membrane protein 998903 16429060 CTRC966_04565 Chlamydia trachomatis RC-J/966 putative integral membrane protein YP_008354460.1 998304 R 907271 CDS YP_008354461.1 527328270 16429061 complement(999098..1000867) 1 NC_021898.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; ABC transporter permease 1000867 16429061 CTRC966_04570 Chlamydia trachomatis RC-J/966 ABC transporter permease YP_008354461.1 999098 R 907271 CDS YP_008354462.1 527328271 16429062 complement(1002394..1004094) 1 NC_021898.1 COG0659 Sulfate permease and related transporters (MFS superfamily); sulfate transporter 1004094 16429062 CTRC966_04590 Chlamydia trachomatis RC-J/966 sulfate transporter YP_008354462.1 1002394 R 907271 CDS YP_008354463.1 527328272 16429063 1004852..1006117 1 NC_021898.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; putative membrane transport protein 1006117 16429063 CTRC966_04595 Chlamydia trachomatis RC-J/966 putative membrane transport protein YP_008354463.1 1004852 D 907271 CDS YP_008354464.1 527328273 16429064 1006227..1008032 1 NC_021898.1 COG0793 Periplasmic protease; putative exported protease 1008032 16429064 CTRC966_04600 Chlamydia trachomatis RC-J/966 putative exported protease YP_008354464.1 1006227 D 907271 CDS YP_008354465.1 527328274 16429065 1008127..1009050 1 NC_021898.1 COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1009050 ispH 16429065 ispH Chlamydia trachomatis RC-J/966 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_008354465.1 1008127 D 907271 CDS YP_008354466.1 527328275 16429066 complement(1009102..1010583) 1 NC_021898.1 hypothetical protein 1010583 16429066 CTRC966_04610 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354466.1 1009102 R 907271 CDS YP_008354467.1 527328276 16429067 complement(1010595..1012115) 1 NC_021898.1 putative type III secretion translocator 1012115 16429067 CTRC966_04615 Chlamydia trachomatis RC-J/966 putative type III secretion translocator YP_008354467.1 1010595 R 907271 CDS YP_008354468.1 527328277 16429068 complement(1012143..1012661) 1 NC_021898.1 COG0457 FOG: TPR repeat; type III secretion chaperone 1012661 16429068 CTRC966_04620 Chlamydia trachomatis RC-J/966 type III secretion chaperone YP_008354468.1 1012143 R 907271 CDS YP_008354469.1 527328278 16429069 complement(1012661..1014109) 1 NC_021898.1 hypothetical protein 1014109 16429069 CTRC966_04625 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354469.1 1012661 R 907271 CDS YP_008354470.1 527328279 16429070 complement(1014286..1014453) 1 NC_021898.1 COG1352 Methylase of chemotaxis methyl-accepting proteins; hypothetical protein 1014453 16429070 CTRC966_04630 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354470.1 1014286 R 907271 CDS YP_008354471.1 527328280 16429072 1014667..1014972 1 NC_021898.1 hypothetical protein 1014972 16429072 CTRC966_04640 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354471.1 1014667 D 907271 CDS YP_008354472.1 527328281 16429075 complement(1014969..1015871) 1 NC_021898.1 COG0582 Integrase; site-specific tyrosine recombinase XerD 1015871 xerD 16429075 xerD Chlamydia trachomatis RC-J/966 site-specific tyrosine recombinase XerD YP_008354472.1 1014969 R 907271 CDS YP_008354473.1 527328282 16429076 1016119..1017108 1 NC_021898.1 hypothetical protein 1017108 16429076 CTRC966_04650 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354473.1 1016119 D 907271 CDS YP_008354474.1 527328283 16429077 1017123..1019339 1 NC_021898.1 COG0296 1,4-alpha-glucan branching enzyme; glycogen branching enzyme 1019339 16429077 CTRC966_04655 Chlamydia trachomatis RC-J/966 glycogen branching enzyme YP_008354474.1 1017123 D 907271 CDS YP_008354475.1 527328284 16429078 complement(1019350..1020369) 1 NC_021898.1 hypothetical protein 1020369 16429078 CTRC966_04660 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354475.1 1019350 R 907271 CDS YP_008354476.1 527328285 16429079 complement(1020592..1021797) 1 NC_021898.1 COG5160 Protease, Ulp1 family; hypothetical protein 1021797 16429079 CTRC966_04665 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354476.1 1020592 R 907271 CDS YP_008354477.1 527328286 16429080 complement(1021974..1024871) 1 NC_021898.1 polymorphic outer membrane protein 1024871 16429080 CTRC966_04670 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008354477.1 1021974 R 907271 CDS YP_008354478.1 527328287 16429081 complement(1024874..1027972) 1 NC_021898.1 polymorphic outer membrane protein 1027972 16429081 CTRC966_04675 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008354478.1 1024874 R 907271 CDS YP_008354479.1 527328288 16429082 1028137..1031175 1 NC_021898.1 polymorphic outer membrane protein 1031175 16429082 CTRC966_04680 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008354479.1 1028137 D 907271 CDS YP_008354480.1 527328289 16429083 1031206..1034226 1 NC_021898.1 polymorphic outer membrane protein 1034226 16429083 CTRC966_04685 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008354480.1 1031206 D 907271 CDS YP_008354481.1 527328290 16429084 1034641..1035237 1 NC_021898.1 hypothetical protein 1035237 16429084 CTRC966_04690 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354481.1 1034641 D 907271 CDS YP_008354482.1 527328291 16429085 complement(1035332..1037968) 1 NC_021898.1 polymorphic outer membrane protein 1037968 16429085 CTRC966_04695 Chlamydia trachomatis RC-J/966 polymorphic outer membrane protein YP_008354482.1 1035332 R 907271 CDS YP_008354483.1 527328292 16429086 1037954..1038097 1 NC_021898.1 hypothetical protein 1038097 16429086 CTRC966_04700 Chlamydia trachomatis RC-J/966 hypothetical protein YP_008354483.1 1037954 D 907271 CDS