-- dump date 20111121_011221 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001653104.1 166154849 5859500 1..1017 1 NC_010280.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1017 hemB 5859500 hemB Chlamydia trachomatis L2b/UCH-1/proctitis delta-aminolevulinic acid dehydratase YP_001653104.1 1 D 471473 CDS YP_001653105.1 166154850 5859728 complement(1043..2440) 1 NC_010280.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 2440 nqrA 5859728 nqrA Chlamydia trachomatis L2b/UCH-1/proctitis Na(+)-translocating NADH-quinone reductase subunit A YP_001653105.1 1043 R 471473 CDS YP_001653106.1 166154851 5859478 complement(2462..2896) 1 NC_010280.1 hypothetical protein 2896 5859478 CTLon_0003 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653106.1 2462 R 471473 CDS YP_001653107.1 166154852 5859499 3010..5157 1 NC_010280.1 contains N-terminal domain of unknown function fused to transcription elongation factor; GreA is necessary for efficient RNA polymerization through arresting sites; cleaves the nascent transcript and allows resumption of transcription elongation; transcript cleavage factor/unknown domain fusion protein 5157 greA 5859499 greA Chlamydia trachomatis L2b/UCH-1/proctitis transcript cleavage factor/unknown domain fusion protein YP_001653107.1 3010 D 471473 CDS YP_001653108.1 166154853 5859615 5345..6547 1 NC_010280.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 6547 aspC 5859615 aspC Chlamydia trachomatis L2b/UCH-1/proctitis aromatic amino acid aminotransferase YP_001653108.1 5345 D 471473 CDS YP_001653109.1 166154854 5858849 6522..7532 1 NC_010280.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 7532 5858849 CTLon_0006 Chlamydia trachomatis L2b/UCH-1/proctitis rod shape-determining protein MreC YP_001653109.1 6522 D 471473 CDS YP_001653110.1 166154855 5859498 complement(7548..10628) 1 NC_010280.1 exodeoxyribonuclease V beta chain 10628 recB 5859498 recB Chlamydia trachomatis L2b/UCH-1/proctitis exodeoxyribonuclease V beta chain YP_001653110.1 7548 R 471473 CDS YP_001653111.1 166154856 5858962 complement(10630..13650) 1 NC_010280.1 exodeoxyribonuclease V gamma chain 13650 recC 5858962 recC Chlamydia trachomatis L2b/UCH-1/proctitis exodeoxyribonuclease V gamma chain YP_001653111.1 10630 R 471473 CDS YP_001653112.1 166154857 5858975 13663..15342 1 NC_010280.1 putative membrane efflux protein 15342 5858975 CTLon_0009 Chlamydia trachomatis L2b/UCH-1/proctitis putative membrane efflux protein YP_001653112.1 13663 D 471473 CDS YP_001653113.1 166154858 5859496 complement(15362..16177) 1 NC_010280.1 hypothetical protein 16177 5859496 CTLon_0010 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653113.1 15362 R 471473 CDS YP_001653114.1 166154859 5859495 17070..19643 1 NC_010280.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I/SWI domain fusion protein 19643 topA 5859495 topA Chlamydia trachomatis L2b/UCH-1/proctitis DNA topoisomerase I/SWI domain fusion protein YP_001653114.1 17070 D 471473 CDS YP_001653115.1 166154860 5859621 complement(19673..20677) 1 NC_010280.1 putative oxidoreductase 20677 5859621 CTLon_0012 Chlamydia trachomatis L2b/UCH-1/proctitis putative oxidoreductase YP_001653115.1 19673 R 471473 CDS YP_001653116.1 166154861 5859494 complement(20656..20952) 1 NC_010280.1 integral membrane protein 20952 5859494 CTLon_0013 Chlamydia trachomatis L2b/UCH-1/proctitis integral membrane protein YP_001653116.1 20656 R 471473 CDS YP_001653117.1 166154862 5859491 21057..22436 1 NC_010280.1 hypothetical protein 22436 5859491 CTLon_0014 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653117.1 21057 D 471473 CDS YP_001653118.1 166154863 5859490 22436..23014 1 NC_010280.1 hypothetical protein 23014 5859490 CTLon_0015 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653118.1 22436 D 471473 CDS YP_001653119.1 166154864 5859489 23005..24279 1 NC_010280.1 hypothetical protein 24279 5859489 CTLon_0016 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653119.1 23005 D 471473 CDS YP_001653120.1 166154865 5859488 24282..24818 1 NC_010280.1 Similar to many proposed 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein 24818 5859488 CTLon_0017 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653120.1 24282 D 471473 CDS YP_001653121.1 166154866 5859487 25078..26136 1 NC_010280.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 26136 recA 5859487 recA Chlamydia trachomatis L2b/UCH-1/proctitis recombinase A YP_001653121.1 25078 D 471473 CDS YP_001653122.1 166154867 5858967 26422..28248 1 NC_010280.1 putative exported lipoprotein 28248 5858967 CTLon_0019 Chlamydia trachomatis L2b/UCH-1/proctitis putative exported lipoprotein YP_001653122.1 26422 D 471473 CDS YP_001653123.1 166154868 5859486 28245..29735 1 NC_010280.1 exodeoxyribonuclease V alpha chain 29735 recD 5859486 recD Chlamydia trachomatis L2b/UCH-1/proctitis exodeoxyribonuclease V alpha chain YP_001653123.1 28245 D 471473 CDS YP_001653124.1 166154869 5858982 29801..29980 1 NC_010280.1 hypothetical protein 29980 5858982 CTLon_0021 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653124.1 29801 D 471473 CDS YP_001653125.1 166154870 5859485 complement(30081..30800) 1 NC_010280.1 ABC transporter ATP-binding protein 30800 5859485 CTLon_0022 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transporter ATP-binding protein YP_001653125.1 30081 R 471473 CDS YP_001653126.1 166154871 5859484 complement(30809..31297) 1 NC_010280.1 hypothetical protein 31297 5859484 CTLon_0023 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653126.1 30809 R 471473 CDS YP_001653127.1 166154872 5859481 complement(31294..32103) 1 NC_010280.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 32103 kdsA 5859481 kdsA Chlamydia trachomatis L2b/UCH-1/proctitis 2-dehydro-3-deoxyphosphooctonate aldolase YP_001653127.1 31294 R 471473 CDS YP_001653128.1 166154873 5859551 32589..32882 1 NC_010280.1 hypothetical protein 32882 5859551 CTLon_0025 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653128.1 32589 D 471473 CDS YP_001653129.1 166154874 5859480 32882..33199 1 NC_010280.1 hypothetical protein 33199 5859480 CTLon_0026 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653129.1 32882 D 471473 CDS YP_001653130.1 166154875 5859479 33281..34288 1 NC_010280.1 ribosomal large subunit pseudouridine synthase D 34288 sfhB 5859479 sfhB Chlamydia trachomatis L2b/UCH-1/proctitis ribosomal large subunit pseudouridine synthase D YP_001653130.1 33281 D 471473 CDS YP_001653131.1 166154876 5858891 34388..34624 1 NC_010280.1 hypothetical protein 34624 5858891 CTLon_0028 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653131.1 34388 D 471473 CDS YP_001653132.1 166154877 5859476 complement(34763..36235) 1 NC_010280.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 36235 gyrA2 5859476 gyrA2 Chlamydia trachomatis L2b/UCH-1/proctitis DNA topoisomerase IV subunit A YP_001653132.1 34763 R 471473 CDS YP_001653133.1 166154878 5859700 complement(36250..38067) 1 NC_010280.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 38067 gyrB 5859700 gyrB Chlamydia trachomatis L2b/UCH-1/proctitis DNA topoisomerase IV subunit B YP_001653133.1 36250 R 471473 CDS YP_001653134.1 166154879 5859699 38447..39454 1 NC_010280.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 39454 hemA 5859699 hemA Chlamydia trachomatis L2b/UCH-1/proctitis glutamyl-tRNA reductase YP_001653134.1 38447 D 471473 CDS YP_001653135.1 166154880 5859724 40173..40574 1 NC_010280.1 Type III secretion system chaperone 40574 sycE 5859724 sycE Chlamydia trachomatis L2b/UCH-1/proctitis Type III secretion system chaperone YP_001653135.1 40173 D 471473 CDS YP_001653136.1 166154881 5859592 40578..43067 1 NC_010280.1 phosphopeptide binding protein ( to be a TTSS protein) 43067 5859592 CTLon_0033 Chlamydia trachomatis L2b/UCH-1/proctitis phosphopeptide binding protein ( to be a TTSS protein) YP_001653136.1 40578 D 471473 CDS YP_001653137.1 166154882 5859475 43111..43362 1 NC_010280.1 hypothetical protein 43362 5859475 CTLon_0034 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653137.1 43111 D 471473 CDS YP_001653138.1 166154883 5859474 43389..43640 1 NC_010280.1 hypothetical protein 43640 5859474 CTLon_0035 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653138.1 43389 D 471473 CDS YP_001653139.1 166154884 5859473 43659..44108 1 NC_010280.1 hypothetical protein 44108 5859473 CTLon_0036 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653139.1 43659 D 471473 CDS YP_001653140.1 166154885 5859470 44128..44799 1 NC_010280.1 hypothetical protein 44799 5859470 CTLon_0037 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653140.1 44128 D 471473 CDS YP_001653141.1 166154886 5859464 44801..46129 1 NC_010280.1 type III secretion system ATPase 46129 sctN 5859464 sctN Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system ATPase YP_001653141.1 44801 D 471473 CDS YP_001653142.1 166154887 5859079 46152..46658 1 NC_010280.1 hypothetical protein 46658 5859079 CTLon_0039 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653142.1 46152 D 471473 CDS YP_001653143.1 166154888 5859460 46662..47513 1 NC_010280.1 hypothetical protein 47513 5859460 CTLon_0040 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653143.1 46662 D 471473 CDS YP_001653144.1 166154889 5859459 47523..48644 1 NC_010280.1 type III secretion system protein 48644 sctQ 5859459 sctQ Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system protein YP_001653144.1 47523 D 471473 CDS YP_001653145.1 166154890 5859605 48779..50251 1 NC_010280.1 putative serine/threonine-protein kinase (TTSS effector protein) 50251 pkn5 5859605 pkn5 Chlamydia trachomatis L2b/UCH-1/proctitis putative serine/threonine-protein kinase (TTSS effector protein) YP_001653145.1 48779 D 471473 CDS YP_001653146.1 166154891 5859748 50248..53013 1 NC_010280.1 Type III secretion structural protein (outer membrane ring) 53013 5859748 CTLon_0043 Chlamydia trachomatis L2b/UCH-1/proctitis Type III secretion structural protein (outer membrane ring) YP_001653146.1 50248 D 471473 CDS YP_001653147.1 166154892 5859667 complement(53327..54397) 1 NC_010280.1 ATP:guanido phosphotransferase 54397 aspC 5859667 aspC Chlamydia trachomatis L2b/UCH-1/proctitis ATP:guanido phosphotransferase YP_001653147.1 53327 R 471473 CDS YP_001653148.1 166154893 5858848 complement(54387..54908) 1 NC_010280.1 hypothetical protein 54908 5858848 CTLon_0045 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653148.1 54387 R 471473 CDS YP_001653149.1 166154894 5859712 complement(55280..55819) 1 NC_010280.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 55819 frr 5859712 frr Chlamydia trachomatis L2b/UCH-1/proctitis ribosome recycling factor YP_001653149.1 55280 R 471473 CDS YP_001653150.1 166154895 5859600 complement(55816..56553) 1 NC_010280.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 56553 pyrH 5859600 pyrH Chlamydia trachomatis L2b/UCH-1/proctitis uridylate kinase YP_001653150.1 55816 R 471473 CDS YP_001653151.1 166154896 5858934 complement(56566..57414) 1 NC_010280.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 57414 tsf 5858934 tsf Chlamydia trachomatis L2b/UCH-1/proctitis elongation factor Ts YP_001653151.1 56566 R 471473 CDS YP_001653152.1 166154897 5859240 complement(57411..58259) 1 NC_010280.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 58259 rpsB 5859240 rpsB Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S2 YP_001653152.1 57411 R 471473 CDS YP_001653153.1 166154898 5859466 complement(58643..59827) 1 NC_010280.1 major outer membrane protein 59827 ompA 5859466 ompA Chlamydia trachomatis L2b/UCH-1/proctitis major outer membrane protein YP_001653153.1 58643 R 471473 CDS YP_001653154.1 166154899 5859145 60435..63677 1 NC_010280.1 penicillin-binding protein 63677 pbpB 5859145 pbpB Chlamydia trachomatis L2b/UCH-1/proctitis penicillin-binding protein YP_001653154.1 60435 D 471473 CDS YP_001653155.1 166154900 5859171 63741..64748 1 NC_010280.1 TPR repeat-containing protein 64748 5859171 CTLon_0052 Chlamydia trachomatis L2b/UCH-1/proctitis TPR repeat-containing protein YP_001653155.1 63741 D 471473 CDS YP_001653156.1 166154901 5859455 65090..66541 1 NC_010280.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 66541 5859455 CTLon_0053 Chlamydia trachomatis L2b/UCH-1/proctitis cysteine desulfurase activator complex subunit SufB YP_001653156.1 65090 D 471473 CDS YP_001653157.1 166154902 5859451 66544..67311 1 NC_010280.1 ABC transporter ATP-binding protein 67311 5859451 CTLon_0054 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transporter ATP-binding protein YP_001653157.1 66544 D 471473 CDS YP_001653158.1 166154903 5859450 67315..68502 1 NC_010280.1 hypothetical protein 68502 5859450 CTLon_0055 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653158.1 67315 D 471473 CDS YP_001653159.1 166154904 5859446 68495..69700 1 NC_010280.1 cysteine desulfurase 69700 sufS 5859446 sufS Chlamydia trachomatis L2b/UCH-1/proctitis cysteine desulfurase YP_001653159.1 68495 D 471473 CDS YP_001653160.1 166154905 5859590 69836..70681 1 NC_010280.1 putative chromosome partitioning protein 70681 parB 5859590 parB Chlamydia trachomatis L2b/UCH-1/proctitis putative chromosome partitioning protein YP_001653160.1 69836 D 471473 CDS YP_001653161.1 166154906 5859583 complement(70673..71503) 1 NC_010280.1 ABC transport protein, ATPase component 71503 dppF 5859583 dppF Chlamydia trachomatis L2b/UCH-1/proctitis ABC transport protein, ATPase component YP_001653161.1 70673 R 471473 CDS YP_001653162.1 166154907 5859411 complement(71496..72461) 1 NC_010280.1 ABC transport protein, ATPase component 72461 dppD 5859411 dppD Chlamydia trachomatis L2b/UCH-1/proctitis ABC transport protein, ATPase component YP_001653162.1 71496 R 471473 CDS YP_001653163.1 166154908 5859413 72622..73296 1 NC_010280.1 hypothetical protein 73296 5859413 CTLon_0060 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653163.1 72622 D 471473 CDS YP_001653164.1 166154909 5859443 73299..74579 1 NC_010280.1 low-affinity inorganic phosphate transporter 74579 5859443 CTLon_0061 Chlamydia trachomatis L2b/UCH-1/proctitis low-affinity inorganic phosphate transporter YP_001653164.1 73299 D 471473 CDS YP_001653165.1 166154910 5859425 74707..75918 1 NC_010280.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 75918 pgk 5859425 pgk Chlamydia trachomatis L2b/UCH-1/proctitis phosphoglycerate kinase YP_001653165.1 74707 D 471473 CDS YP_001653166.1 166154911 5859710 76178..77146 1 NC_010280.1 hypothetical protein 77146 5859710 CTLon_0063 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653166.1 76178 D 471473 CDS YP_001653167.1 166154912 5859423 77197..78393 1 NC_010280.1 hypothetical protein 78393 5859423 CTLon_0064 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653167.1 77197 D 471473 CDS YP_001653168.1 166154913 5859420 78479..79657 1 NC_010280.1 hypothetical protein 79657 5859420 CTLon_0065 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653168.1 78479 D 471473 CDS YP_001653169.1 166154914 5859418 complement(79654..80289) 1 NC_010280.1 endonuclease III 80289 nth 5859418 nth Chlamydia trachomatis L2b/UCH-1/proctitis endonuclease III YP_001653169.1 79654 R 471473 CDS YP_001653170.1 166154915 5859449 complement(80296..81630) 1 NC_010280.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 81630 trmE 5859449 trmE Chlamydia trachomatis L2b/UCH-1/proctitis tRNA modification GTPase TrmE YP_001653170.1 80296 R 471473 CDS YP_001653171.1 166154916 5859588 81898..82803 1 NC_010280.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 82803 psdD 5859588 psdD Chlamydia trachomatis L2b/UCH-1/proctitis phosphatidylserine decarboxylase YP_001653171.1 81898 D 471473 CDS YP_001653172.1 166154917 5858866 82869..84194 1 NC_010280.1 note the PF07719 Tetratricopeptide repeat motif; hypothetical protein 84194 5858866 CTLon_0069 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653172.1 82869 D 471473 CDS YP_001653173.1 166154918 5859417 84453..87362 1 NC_010280.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 87362 secA 5859417 secA Chlamydia trachomatis L2b/UCH-1/proctitis preprotein translocase subunit SecA YP_001653173.1 84453 D 471473 CDS YP_001653174.1 166154919 5859701 complement(87456..87983) 1 NC_010280.1 hypothetical protein 87983 5859701 CTLon_0071 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653174.1 87456 R 471473 CDS YP_001653175.1 166154920 5859415 complement(88060..89532) 1 NC_010280.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 89532 engA 5859415 engA Chlamydia trachomatis L2b/UCH-1/proctitis GTP-binding protein EngA YP_001653175.1 88060 R 471473 CDS YP_001653176.1 166154921 5859431 complement(89648..90880) 1 NC_010280.1 polyA polymerase 90880 pcnB 5859431 pcnB Chlamydia trachomatis L2b/UCH-1/proctitis polyA polymerase YP_001653176.1 89648 R 471473 CDS YP_001653177.1 166154922 5859136 complement(90895..92154) 1 NC_010280.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 92154 clpX 5859136 clpX Chlamydia trachomatis L2b/UCH-1/proctitis ATP-dependent protease ATP-binding subunit ClpX YP_001653177.1 90895 R 471473 CDS YP_001653178.1 166154923 5859327 complement(92164..92775) 1 NC_010280.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 92775 clpP 5859327 clpP Chlamydia trachomatis L2b/UCH-1/proctitis ATP-dependent Clp protease proteolytic subunit YP_001653178.1 92164 R 471473 CDS YP_001653179.1 166154924 5859326 complement(92942..94270) 1 NC_010280.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 94270 tig 5859326 tig Chlamydia trachomatis L2b/UCH-1/proctitis trigger factor YP_001653179.1 92942 R 471473 CDS YP_001653180.1 166154925 5859566 94629..98120 1 NC_010280.1 putative helicase 98120 5859566 CTLon_0077 Chlamydia trachomatis L2b/UCH-1/proctitis putative helicase YP_001653180.1 94629 D 471473 CDS YP_001653181.1 166154926 5859414 98125..99225 1 NC_010280.1 rod shape-determining protein MreB 99225 mreB 5859414 mreB Chlamydia trachomatis L2b/UCH-1/proctitis rod shape-determining protein MreB YP_001653181.1 98125 D 471473 CDS YP_001653182.1 166154927 5859538 99222..101021 1 NC_010280.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 101021 pckA 5859538 pckA Chlamydia trachomatis L2b/UCH-1/proctitis phosphoenolpyruvate carboxykinase YP_001653182.1 99222 D 471473 CDS YP_001653183.1 166154928 5858916 101133..103436 1 NC_010280.1 hypothetical protein 103436 5858916 CTLon_0080 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653183.1 101133 D 471473 CDS YP_001653184.1 166154929 5859412 103463..104635 1 NC_010280.1 hypothetical protein 104635 5859412 CTLon_0081 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653184.1 103463 D 471473 CDS YP_001653185.1 166154930 5859408 complement(104701..105723) 1 NC_010280.1 outer membrane protein B 105723 ompB 5859408 ompB Chlamydia trachomatis L2b/UCH-1/proctitis outer membrane protein B YP_001653185.1 104701 R 471473 CDS YP_001653186.1 166154931 5859155 complement(105857..106861) 1 NC_010280.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 106861 gpsA 5859155 gpsA Chlamydia trachomatis L2b/UCH-1/proctitis NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001653186.1 105857 R 471473 CDS YP_001653187.1 166154932 5859637 complement(106858..108225) 1 NC_010280.1 UDP-N-acetylglucosamine pyrophosphorylase 108225 5859637 CTLon_0084 Chlamydia trachomatis L2b/UCH-1/proctitis UDP-N-acetylglucosamine pyrophosphorylase YP_001653187.1 106858 R 471473 CDS YP_001653188.1 166154933 5859407 complement(108237..108602) 1 NC_010280.1 hypothetical protein 108602 5859407 CTLon_0085 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653188.1 108237 R 471473 CDS YP_001653189.1 166154934 5859406 complement(108595..109899) 1 NC_010280.1 involved in type III protein export; type III secretion system ATPase 109899 fliI 5859406 fliI Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system ATPase YP_001653189.1 108595 R 471473 CDS YP_001653190.1 166154935 5859477 complement(109973..110497) 1 NC_010280.1 hypothetical protein 110497 5859477 CTLon_0087 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653190.1 109973 R 471473 CDS YP_001653191.1 166154936 5859400 complement(110502..111506) 1 NC_010280.1 type III secretion system protein 111506 fliF 5859400 fliF Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system protein YP_001653191.1 110502 R 471473 CDS YP_001653192.1 166154937 5859482 complement(111780..112562) 1 NC_010280.1 note the NifU-like protein domains: PF01592;NifU-like N terminal domain and PF01106, NifU-like domain; hypothetical protein 112562 5859482 CTLon_0089 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653192.1 111780 R 471473 CDS YP_001653193.1 166154938 5859399 complement(112559..113713) 1 NC_010280.1 cysteine desulfurase 113713 5859399 CTLon_0090 Chlamydia trachomatis L2b/UCH-1/proctitis cysteine desulfurase YP_001653193.1 112559 R 471473 CDS YP_001653194.1 166154939 5859396 complement(113668..114348) 1 NC_010280.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 114348 pgmA 5859396 pgmA Chlamydia trachomatis L2b/UCH-1/proctitis phosphoglyceromutase YP_001653194.1 113668 R 471473 CDS YP_001653195.1 166154940 5859507 114643..115368 1 NC_010280.1 ribosomal large subunit pseudouridine synthase B 115368 5859507 CTLon_0092 Chlamydia trachomatis L2b/UCH-1/proctitis ribosomal large subunit pseudouridine synthase B YP_001653195.1 114643 D 471473 CDS YP_001653196.1 166154941 5859395 115487..116011 1 NC_010280.1 hypothetical protein 116011 5859395 CTLon_0093 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653196.1 115487 D 471473 CDS YP_001653197.1 166154942 5859393 116038..116592 1 NC_010280.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 116592 birA 5859393 birA Chlamydia trachomatis L2b/UCH-1/proctitis biotin--protein ligase YP_001653197.1 116038 D 471473 CDS YP_001653198.1 166154943 5859124 complement(116599..117738) 1 NC_010280.1 cell cycle protein 117738 5859124 CTLon_0095 Chlamydia trachomatis L2b/UCH-1/proctitis cell cycle protein YP_001653198.1 116599 R 471473 CDS YP_001653199.1 166154944 5859392 complement(117830..119809) 1 NC_010280.1 cation transporting ATPase 119809 5859392 CTLon_0096 Chlamydia trachomatis L2b/UCH-1/proctitis cation transporting ATPase YP_001653199.1 117830 R 471473 CDS YP_001653200.1 166154945 5859385 complement(119833..120579) 1 NC_010280.1 putative integral membrane protein 120579 5859385 CTLon_0097 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653200.1 119833 R 471473 CDS YP_001653201.1 166154946 5859384 complement(120616..121902) 1 NC_010280.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 121902 serS 5859384 serS Chlamydia trachomatis L2b/UCH-1/proctitis seryl-tRNA synthetase YP_001653201.1 120616 R 471473 CDS YP_001653202.1 166154947 5859595 121944..123071 1 NC_010280.1 riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) 123071 ribD 5859595 ribD Chlamydia trachomatis L2b/UCH-1/proctitis riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) YP_001653202.1 121944 D 471473 CDS YP_001653203.1 166154948 5859088 123181..124455 1 NC_010280.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 124455 ribA 5859088 ribA Chlamydia trachomatis L2b/UCH-1/proctitis bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_001653203.1 123181 D 471473 CDS YP_001653204.1 166154949 5859060 124424..124897 1 NC_010280.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 124897 ribH 5859060 ribH Chlamydia trachomatis L2b/UCH-1/proctitis 6,7-dimethyl-8-ribityllumazine synthase YP_001653204.1 124424 D 471473 CDS YP_001653205.1 166154950 5859093 complement(124948..126294) 1 NC_010280.1 hypothetical protein 126294 5859093 CTLon_0102 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653205.1 124948 R 471473 CDS YP_001653206.1 166154951 5859382 126679..127344 1 NC_010280.1 putative lipoprotein 127344 5859382 CTLon_0103 Chlamydia trachomatis L2b/UCH-1/proctitis putative lipoprotein YP_001653206.1 126679 D 471473 CDS YP_001653207.1 166154952 5859380 127461..128828 1 NC_010280.1 Na(+)-linked D-alanine glycine permease 128828 dagA 5859380 dagA Chlamydia trachomatis L2b/UCH-1/proctitis Na(+)-linked D-alanine glycine permease YP_001653207.1 127461 D 471473 CDS YP_001653208.1 166154953 5859365 128886..129338 1 NC_010280.1 Note the PF01161;Phosphatidylethanolamine-binding motif; hypothetical protein 129338 5859365 CTLon_0105 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653208.1 128886 D 471473 CDS YP_001653209.1 166154954 5859377 complement(129347..130006) 1 NC_010280.1 SET domain-containing protein 130006 5859377 CTLon_0106 Chlamydia trachomatis L2b/UCH-1/proctitis SET domain-containing protein YP_001653209.1 129347 R 471473 CDS YP_001653210.1 166154955 5859375 complement(130003..130791) 1 NC_010280.1 Zn-dependent hydrolase 130791 5859375 CTLon_0107 Chlamydia trachomatis L2b/UCH-1/proctitis Zn-dependent hydrolase YP_001653210.1 130003 R 471473 CDS YP_001653211.1 166154956 5859373 complement(130795..133194) 1 NC_010280.1 cell division protein 133194 ftsK 5859373 ftsK Chlamydia trachomatis L2b/UCH-1/proctitis cell division protein YP_001653211.1 130795 R 471473 CDS YP_001653212.1 166154957 5858885 complement(139465..140760) 1 NC_010280.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 140760 dmpP 5858885 dmpP Chlamydia trachomatis L2b/UCH-1/proctitis Na(+)-translocating NADH-quinone reductase subunit F YP_001653212.1 139465 R 471473 CDS YP_001653213.1 166154958 5859389 complement(140903..141247) 1 NC_010280.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 141247 yajC 5859389 yajC Chlamydia trachomatis L2b/UCH-1/proctitis preprotein translocase subunit YajC YP_001653213.1 140903 R 471473 CDS YP_001653214.1 166154959 5859372 complement(141352..142542) 1 NC_010280.1 rRNA methyltransferase 142542 5859372 CTLon_0111 Chlamydia trachomatis L2b/UCH-1/proctitis rRNA methyltransferase YP_001653214.1 141352 R 471473 CDS YP_001653215.1 166154960 5859371 complement(142730..143107) 1 NC_010280.1 histone H1--like developmental protein 143107 hctA 5859371 hctA Chlamydia trachomatis L2b/UCH-1/proctitis histone H1--like developmental protein YP_001653215.1 142730 R 471473 CDS YP_001653216.1 166154961 5859720 143503..145971 1 NC_010280.1 hypothetical protein 145971 5859720 CTLon_0113 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653216.1 143503 D 471473 CDS YP_001653217.1 166154962 5859369 complement(145963..147237) 1 NC_010280.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 147237 hemG 5859369 hemG Chlamydia trachomatis L2b/UCH-1/proctitis protoporphyrinogen oxidase YP_001653217.1 145963 R 471473 CDS YP_001653218.1 166154963 5859731 complement(147234..148607) 1 NC_010280.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 148607 hemN 5859731 hemN Chlamydia trachomatis L2b/UCH-1/proctitis coproporphyrinogen III oxidase YP_001653218.1 147234 R 471473 CDS YP_001653219.1 166154964 5859735 complement(148580..149590) 1 NC_010280.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 149590 hemE 5859735 hemE Chlamydia trachomatis L2b/UCH-1/proctitis uroporphyrinogen decarboxylase YP_001653219.1 148580 R 471473 CDS YP_001653220.1 166154965 5859732 complement(149603..152842) 1 NC_010280.1 transcription-repair coupling factor 152842 mfd 5859732 mfd Chlamydia trachomatis L2b/UCH-1/proctitis transcription-repair coupling factor YP_001653220.1 149603 R 471473 CDS YP_001653221.1 166154966 5859559 complement(152818..155445) 1 NC_010280.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 155445 alaS 5859559 alaS Chlamydia trachomatis L2b/UCH-1/proctitis alanyl-tRNA synthetase YP_001653221.1 152818 R 471473 CDS YP_001653222.1 166154967 5858884 161270..163270 1 NC_010280.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 163270 tktB 5858884 tktB Chlamydia trachomatis L2b/UCH-1/proctitis transketolase YP_001653222.1 161270 D 471473 CDS YP_001653223.1 166154968 5859593 complement(163267..164136) 1 NC_010280.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 164136 amn 5859593 amn Chlamydia trachomatis L2b/UCH-1/proctitis AMP nucleosidase YP_001653223.1 163267 R 471473 CDS YP_001653224.1 166154969 5858865 164392..164928 1 NC_010280.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 164928 efp 5858865 efp Chlamydia trachomatis L2b/UCH-1/proctitis elongation factor P YP_001653224.1 164392 D 471473 CDS YP_001653225.1 166154970 5859429 complement(164944..165168) 1 NC_010280.1 hypothetical protein 165168 5859429 CTLon_0122 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653225.1 164944 R 471473 CDS YP_001653226.1 166154971 5859367 complement(165215..166087) 1 NC_010280.1 Note the PF00149;Calcineurin-like phosphoesterase motif; hypothetical protein 166087 5859367 CTLon_0123 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653226.1 165215 R 471473 CDS YP_001653227.1 166154972 5859366 complement(166168..167706) 1 NC_010280.1 60 kDa chaperonin GroEL 167706 groEL 5859366 groEL Chlamydia trachomatis L2b/UCH-1/proctitis 60 kDa chaperonin GroEL YP_001653227.1 166168 R 471473 CDS YP_001653228.1 166154973 5859714 168154..169506 1 NC_010280.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 169506 murF 5859714 murF Chlamydia trachomatis L2b/UCH-1/proctitis UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_001653228.1 168154 D 471473 CDS YP_001653229.1 166154974 5859524 169652..170662 1 NC_010280.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 170662 mraY 5859524 mraY Chlamydia trachomatis L2b/UCH-1/proctitis phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001653229.1 169652 D 471473 CDS YP_001653230.1 166154975 5859536 170674..171924 1 NC_010280.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 171924 murD 5859536 murD Chlamydia trachomatis L2b/UCH-1/proctitis UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001653230.1 170674 D 471473 CDS YP_001653231.1 166154976 5859527 171921..172658 1 NC_010280.1 muramidase 172658 nlpD 5859527 nlpD Chlamydia trachomatis L2b/UCH-1/proctitis muramidase YP_001653231.1 171921 D 471473 CDS YP_001653232.1 166154977 5859472 172674..173831 1 NC_010280.1 cell division protein 173831 ftsW 5859472 ftsW Chlamydia trachomatis L2b/UCH-1/proctitis cell division protein YP_001653232.1 172674 D 471473 CDS YP_001653233.1 166154978 5859528 173740..174798 1 NC_010280.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 174798 murG 5859528 murG Chlamydia trachomatis L2b/UCH-1/proctitis undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001653233.1 173740 D 471473 CDS YP_001653234.1 166154979 5859521 174803..177214 1 NC_010280.1 catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine and catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase 177214 murC 5859521 murC Chlamydia trachomatis L2b/UCH-1/proctitis bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase YP_001653234.1 174803 D 471473 CDS YP_001653235.1 166154980 5859531 complement(177251..177670) 1 NC_010280.1 hypothetical protein 177670 5859531 CTLon_0132 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653235.1 177251 R 471473 CDS YP_001653236.1 166154981 5859364 complement(177828..178634) 1 NC_010280.1 hypothetical protein 178634 5859364 CTLon_0133 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653236.1 177828 R 471473 CDS YP_001653237.1 166154982 5859363 178788..179120 1 NC_010280.1 anti-sigma F factor antagonist 179120 rbsV 5859363 rbsV Chlamydia trachomatis L2b/UCH-1/proctitis anti-sigma F factor antagonist YP_001653237.1 178788 D 471473 CDS YP_001653238.1 166154983 5858948 179124..180143 1 NC_010280.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 180143 miaA 5858948 miaA Chlamydia trachomatis L2b/UCH-1/proctitis tRNA delta(2)-isopentenylpyrophosphate transferase YP_001653238.1 179124 D 471473 CDS YP_001653239.1 166154984 5859549 complement(180148..181200) 1 NC_010280.1 Note the PF04055;Radical SAM superfamily motif; hypothetical protein 181200 5859549 CTLon_0136 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653239.1 180148 R 471473 CDS YP_001653240.1 166154985 5859360 181290..182972 1 NC_010280.1 hypothetical protein 182972 5859360 CTLon_0137 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653240.1 181290 D 471473 CDS YP_001653241.1 166154986 5859357 183426..183785 1 NC_010280.1 Note the Pfam PF02410;Domain of unknown function associated with iojap superfamily proteins; hypothetical protein 183785 5859357 CTLon_0138 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653241.1 183426 D 471473 CDS YP_001653242.1 166154987 5859355 183796..185052 1 NC_010280.1 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 185052 fabF 5859355 fabF Chlamydia trachomatis L2b/UCH-1/proctitis 3-oxoacyl-(acyl carrier protein) synthase II YP_001653242.1 183796 D 471473 CDS YP_001653243.1 166154988 5859439 185049..185501 1 NC_010280.1 Note the Pfam PF00293;NUDIX domain; hypothetical protein 185501 5859439 CTLon_0140 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653243.1 185049 D 471473 CDS YP_001653244.1 166154989 5859351 complement(185582..186211) 1 NC_010280.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 186211 ppa 5859351 ppa Chlamydia trachomatis L2b/UCH-1/proctitis inorganic pyrophosphatase YP_001653244.1 185582 R 471473 CDS YP_001653245.1 166154990 5858838 186459..187499 1 NC_010280.1 leucine dehydrogenase 187499 ldh 5858838 ldh Chlamydia trachomatis L2b/UCH-1/proctitis leucine dehydrogenase YP_001653245.1 186459 D 471473 CDS YP_001653246.1 166154991 5859676 complement(187465..188493) 1 NC_010280.1 3'(2'),5'-bisphosphate nucleotidase 188493 cysQ 5859676 cysQ Chlamydia trachomatis L2b/UCH-1/proctitis 3'(2'),5'-bisphosphate nucleotidase YP_001653246.1 187465 R 471473 CDS YP_001653247.1 166154992 5859362 188791..189552 1 NC_010280.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 189552 5859362 CTLon_0144 Chlamydia trachomatis L2b/UCH-1/proctitis 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001653247.1 188791 D 471473 CDS YP_001653248.1 166154993 5859345 189560..191173 1 NC_010280.1 Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; long chain fatty acid--[acyl-carrier-protein] ligase 191173 aas 5859345 aas Chlamydia trachomatis L2b/UCH-1/proctitis long chain fatty acid--[acyl-carrier-protein] ligase YP_001653248.1 189560 D 471473 CDS YP_001653249.1 166154994 5858882 191216..192349 1 NC_010280.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 192349 bioF 5858882 bioF Chlamydia trachomatis L2b/UCH-1/proctitis 8-amino-7-oxononanoate synthase YP_001653249.1 191216 D 471473 CDS YP_001653250.1 166154995 5859671 complement(192268..194529) 1 NC_010280.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 194529 priA 5859671 priA Chlamydia trachomatis L2b/UCH-1/proctitis primosome assembly protein PriA YP_001653250.1 192268 R 471473 CDS YP_001653251.1 166154996 5858846 complement(194484..195173) 1 NC_010280.1 hypothetical protein 195173 5858846 CTLon_0148 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653251.1 194484 R 471473 CDS YP_001653252.1 166154997 5859342 195329..195823 1 NC_010280.1 protein disulfide isomerase 195823 5859342 CTLon_0149 Chlamydia trachomatis L2b/UCH-1/proctitis protein disulfide isomerase YP_001653252.1 195329 D 471473 CDS YP_001653253.1 166154998 5859341 196055..197635 1 NC_010280.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 197635 lysS 5859341 lysS Chlamydia trachomatis L2b/UCH-1/proctitis lysyl-tRNA synthetase YP_001653253.1 196055 D 471473 CDS YP_001653254.1 166154999 5859568 complement(197632..199125) 1 NC_010280.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 199125 cysS 5859568 cysS Chlamydia trachomatis L2b/UCH-1/proctitis cysteinyl-tRNA synthetase YP_001653254.1 197632 R 471473 CDS YP_001653255.1 166155000 5859361 199378..200427 1 NC_010280.1 hypothetical protein 200427 5859361 CTLon_0152 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653255.1 199378 D 471473 CDS YP_001653256.1 166155001 5859340 complement(200505..200867) 1 NC_010280.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 200867 rnpA 5859340 rnpA Chlamydia trachomatis L2b/UCH-1/proctitis ribonuclease P YP_001653256.1 200505 R 471473 CDS YP_001653257.1 166155002 5859641 complement(200880..201017) 1 NC_010280.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 201017 rpmH 5859641 rpmH Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L34 YP_001653257.1 200880 R 471473 CDS YP_001653258.1 166155003 5859638 201494..201631 1 NC_010280.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 201631 rpmJ 5859638 rpmJ Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L36 YP_001653258.1 201494 D 471473 CDS YP_001653259.1 166155004 5859259 201655..201960 1 NC_010280.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 201960 rpsN 5859259 rpsN Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S14 YP_001653259.1 201655 D 471473 CDS YP_001653260.1 166155005 5859594 complement(201994..202494) 1 NC_010280.1 hypothetical protein 202494 5859594 CTLon_0157 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653260.1 201994 R 471473 CDS YP_001653261.1 166155006 5859339 complement(202616..202867) 1 NC_010280.1 putative integral membrane protein 202867 5859339 CTLon_0158 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653261.1 202616 R 471473 CDS YP_001653262.1 166155007 5859337 203147..203641 1 NC_010280.1 hypothetical protein 203641 5859337 CTLon_0159 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653262.1 203147 D 471473 CDS YP_001653263.1 166155008 5859336 complement(203688..205427) 1 NC_010280.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 205427 uvrC 5859336 uvrC Chlamydia trachomatis L2b/UCH-1/proctitis excinuclease ABC subunit C YP_001653263.1 203688 R 471473 CDS YP_001653264.1 166155009 5859173 complement(205509..207971) 1 NC_010280.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 207971 mutS 5859173 mutS Chlamydia trachomatis L2b/UCH-1/proctitis DNA mismatch repair protein MutS YP_001653264.1 205509 R 471473 CDS YP_001653265.1 166155010 5859331 208304..210091 1 NC_010280.1 synthesizes RNA primers at the replication forks; DNA primase 210091 dnaG 5859331 dnaG Chlamydia trachomatis L2b/UCH-1/proctitis DNA primase YP_001653265.1 208304 D 471473 CDS YP_001653266.1 166155011 5859398 210176..210463 1 NC_010280.1 hypothetical protein 210463 5859398 CTLon_0164 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653266.1 210176 D 471473 CDS YP_001653267.1 166155012 5859329 210590..211081 1 NC_010280.1 hypothetical protein 211081 5859329 CTLon_0165 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653267.1 210590 D 471473 CDS YP_001653268.1 166155013 5859325 complement(211164..214175) 1 NC_010280.1 glycyl-tRNA synthetase 214175 glyQ 5859325 glyQ Chlamydia trachomatis L2b/UCH-1/proctitis glycyl-tRNA synthetase YP_001653268.1 211164 R 471473 CDS YP_001653269.1 166155014 5859585 214629..215237 1 NC_010280.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 215237 pgsA 5859585 pgsA Chlamydia trachomatis L2b/UCH-1/proctitis CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001653269.1 214629 D 471473 CDS YP_001653270.1 166155015 5859629 complement(215244..216668) 1 NC_010280.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 216668 glgA 5859629 glgA Chlamydia trachomatis L2b/UCH-1/proctitis glycogen synthase YP_001653270.1 215244 R 471473 CDS YP_001653271.1 166155016 5859561 217245..217802 1 NC_010280.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 217802 rplY 5859561 rplY Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L25/general stress protein Ctc YP_001653271.1 217245 D 471473 CDS YP_001653272.1 166155017 5859247 217810..218349 1 NC_010280.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 218349 pth 5859247 pth Chlamydia trachomatis L2b/UCH-1/proctitis peptidyl-tRNA hydrolase YP_001653272.1 217810 D 471473 CDS YP_001653273.1 166155018 5858876 218487..218825 1 NC_010280.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 218825 rpsF 5858876 rpsF Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S6 YP_001653273.1 218487 D 471473 CDS YP_001653274.1 166155019 5858875 218842..219087 1 NC_010280.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 219087 rpsR 5858875 rpsR Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S18 YP_001653274.1 218842 D 471473 CDS YP_001653275.1 166155020 5859768 219108..219611 1 NC_010280.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 219611 rplI 5859768 rplI Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L9 YP_001653275.1 219108 D 471473 CDS YP_001653276.1 166155021 5859705 219675..220541 1 NC_010280.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 220541 ispE 5859705 ispE Chlamydia trachomatis L2b/UCH-1/proctitis 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001653276.1 219675 D 471473 CDS YP_001653277.1 166155022 5859697 complement(220844..222196) 1 NC_010280.1 putative integral membrane protein 222196 5859697 CTLon_0175 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653277.1 220844 R 471473 CDS YP_001653278.1 166155023 5859324 complement(222375..225245) 1 NC_010280.1 exported insulinase/protease 225245 ptr 5859324 ptr Chlamydia trachomatis L2b/UCH-1/proctitis exported insulinase/protease YP_001653278.1 222375 R 471473 CDS YP_001653279.1 166155024 5858908 complement(225297..226298) 1 NC_010280.1 glycerol-3-phosphate acyltransferase 226298 plsB 5858908 plsB Chlamydia trachomatis L2b/UCH-1/proctitis glycerol-3-phosphate acyltransferase YP_001653279.1 225297 R 471473 CDS YP_001653280.1 166155025 5859750 complement(226311..227849) 1 NC_010280.1 ribonuclease E 227849 cafE 5859750 cafE Chlamydia trachomatis L2b/UCH-1/proctitis ribonuclease E YP_001653280.1 226311 R 471473 CDS YP_001653281.1 166155026 5859620 228413..228733 1 NC_010280.1 hypothetical protein 228733 5859620 CTLon_0179 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653281.1 228413 D 471473 CDS YP_001653282.1 166155027 5859320 228673..228999 1 NC_010280.1 hypothetical protein 228999 5859320 CTLon_0180 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653282.1 228673 D 471473 CDS YP_001653283.1 166155028 5859319 228983..229162 1 NC_010280.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 229162 rpmF 5859319 rpmF Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L32 YP_001653283.1 228983 D 471473 CDS YP_001653284.1 166155029 5859227 229184..230149 1 NC_010280.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 230149 plsX 5859227 plsX Chlamydia trachomatis L2b/UCH-1/proctitis putative glycerol-3-phosphate acyltransferase PlsX YP_001653284.1 229184 D 471473 CDS YP_001653285.1 166155030 5859752 230369..234961 1 NC_010280.1 polymorphic outer membrane protein 234961 pmpD 5859752 pmpD Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653285.1 230369 D 471473 CDS YP_001653286.1 166155031 5859755 235162..235956 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 235956 5859755 CTLon_0184 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653286.1 235162 D 471473 CDS YP_001653287.1 166155032 5859318 complement(236040..236339) 1 NC_010280.1 hypothetical protein 236339 5859318 CTLon_0185 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653287.1 236040 R 471473 CDS YP_001653288.1 166155033 5859317 complement(236360..236722) 1 NC_010280.1 hypothetical protein 236722 5859317 CTLon_0186 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653288.1 236360 R 471473 CDS YP_001653289.1 166155034 5859315 236967..238343 1 NC_010280.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 238343 glmM 5859315 glmM Chlamydia trachomatis L2b/UCH-1/proctitis phosphoglucosamine mutase YP_001653289.1 236967 D 471473 CDS YP_001653290.1 166155035 5859314 238354..240174 1 NC_010280.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 240174 glmS 5859314 glmS Chlamydia trachomatis L2b/UCH-1/proctitis glucosamine--fructose-6-phosphate aminotransferase YP_001653290.1 238354 D 471473 CDS YP_001653291.1 166155036 5859573 240277..241473 1 NC_010280.1 tyrosine-specific transport protein 241473 tyrP 5859573 tyrP Chlamydia trachomatis L2b/UCH-1/proctitis tyrosine-specific transport protein YP_001653291.1 240277 D 471473 CDS YP_001653292.1 166155037 5859691 241656..242849 1 NC_010280.1 tyrosine-specific transport protein 242849 5859691 CTLon_0190 Chlamydia trachomatis L2b/UCH-1/proctitis tyrosine-specific transport protein YP_001653292.1 241656 D 471473 CDS YP_001653293.1 166155038 5859313 242891..243607 1 NC_010280.1 putative membrane transport protein 243607 5859313 CTLon_0191 Chlamydia trachomatis L2b/UCH-1/proctitis putative membrane transport protein YP_001653293.1 242891 D 471473 CDS YP_001653294.1 166155039 5859312 complement(243704..244558) 1 NC_010280.1 cell division protein 244558 ftsY 5859312 ftsY Chlamydia trachomatis L2b/UCH-1/proctitis cell division protein YP_001653294.1 243704 R 471473 CDS YP_001653295.1 166155040 5859530 244628..245788 1 NC_010280.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 245788 sucC 5859530 sucC Chlamydia trachomatis L2b/UCH-1/proctitis succinyl-CoA synthetase subunit beta YP_001653295.1 244628 D 471473 CDS YP_001653296.1 166155041 5859771 245803..246678 1 NC_010280.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 246678 sucD 5859771 sucD Chlamydia trachomatis L2b/UCH-1/proctitis succinyl-CoA synthetase subunit alpha YP_001653296.1 245803 D 471473 CDS YP_001653297.1 166155042 5859591 246818..248311 1 NC_010280.1 serine protease 248311 htrA 5859591 htrA Chlamydia trachomatis L2b/UCH-1/proctitis serine protease YP_001653297.1 246818 D 471473 CDS YP_001653298.1 166155043 5859532 248513..251437 1 NC_010280.1 metalloprotease-insulinase 251437 5859532 CTLon_0196 Chlamydia trachomatis L2b/UCH-1/proctitis metalloprotease-insulinase YP_001653298.1 248513 D 471473 CDS YP_001653299.1 166155044 5859309 complement(251451..252734) 1 NC_010280.1 DNA recombination protein 252734 rmuC 5859309 rmuC Chlamydia trachomatis L2b/UCH-1/proctitis DNA recombination protein YP_001653299.1 251451 R 471473 CDS YP_001653300.1 166155045 5859092 complement(252738..253529) 1 NC_010280.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 253529 pssA 5859092 pssA Chlamydia trachomatis L2b/UCH-1/proctitis CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001653300.1 252738 R 471473 CDS YP_001653301.1 166155046 5858883 254164..257307 1 NC_010280.1 catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 257307 nrdA 5858883 nrdA Chlamydia trachomatis L2b/UCH-1/proctitis ribonucleotide-diphosphate reductase subunit alpha YP_001653301.1 254164 D 471473 CDS YP_001653302.1 166155047 5859453 257345..258385 1 NC_010280.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 258385 nrdB 5859453 nrdB Chlamydia trachomatis L2b/UCH-1/proctitis ribonucleotide-diphosphate reductase subunit beta YP_001653302.1 257345 D 471473 CDS YP_001653303.1 166155048 5859447 258645..259319 1 NC_010280.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 259319 trmB 5859447 trmB Chlamydia trachomatis L2b/UCH-1/proctitis tRNA (guanine-N(7)-)-methyltransferase YP_001653303.1 258645 D 471473 CDS YP_001653304.1 166155049 5859348 259435..260019 1 NC_010280.1 putative SAM-dependent methyltransferase 260019 5859348 CTLon_0202 Chlamydia trachomatis L2b/UCH-1/proctitis putative SAM-dependent methyltransferase YP_001653304.1 259435 D 471473 CDS YP_001653305.1 166155050 5859307 complement(260016..260891) 1 NC_010280.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 260891 murB 5859307 murB Chlamydia trachomatis L2b/UCH-1/proctitis UDP-N-acetylenolpyruvoylglucosamine reductase YP_001653305.1 260016 R 471473 CDS YP_001653306.1 166155051 5859529 complement(261024..261530) 1 NC_010280.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 261530 nusB 5859529 nusB Chlamydia trachomatis L2b/UCH-1/proctitis transcription antitermination protein NusB YP_001653306.1 261024 R 471473 CDS YP_001653307.1 166155052 5859120 261962..262522 1 NC_010280.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 262522 infC 5859120 infC Chlamydia trachomatis L2b/UCH-1/proctitis translation initiation factor IF-3 YP_001653307.1 261962 D 471473 CDS YP_001653308.1 166155053 5859722 262509..262694 1 NC_010280.1 50S ribosomal protein L35 262694 rpmI 5859722 rpmI Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L35 YP_001653308.1 262509 D 471473 CDS YP_001653309.1 166155054 5858871 262713..263084 1 NC_010280.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 263084 rplT 5858871 rplT Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L20 YP_001653309.1 262713 D 471473 CDS YP_001653310.1 166155055 5859655 263091..264119 1 NC_010280.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 264119 pheS 5859655 pheS Chlamydia trachomatis L2b/UCH-1/proctitis phenylalanyl-tRNA synthetase subunit alpha YP_001653310.1 263091 D 471473 CDS YP_001653311.1 166155056 5859308 264430..266406 1 NC_010280.1 hypothetical protein 266406 5859308 CTLon_0209 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653311.1 264430 D 471473 CDS YP_001653312.1 166155057 5859306 complement(266403..267503) 1 NC_010280.1 putative membrane transport protein 267503 5859306 CTLon_0210 Chlamydia trachomatis L2b/UCH-1/proctitis putative membrane transport protein YP_001653312.1 266403 R 471473 CDS YP_001653313.1 166155058 5859305 complement(267506..268570) 1 NC_010280.1 putative membrane transport protein 268570 5859305 CTLon_0211 Chlamydia trachomatis L2b/UCH-1/proctitis putative membrane transport protein YP_001653313.1 267506 R 471473 CDS YP_001653314.1 166155059 5859304 268668..269633 1 NC_010280.1 tRNA(Ile)-lysidine synthase 269633 tilS 5859304 tilS Chlamydia trachomatis L2b/UCH-1/proctitis tRNA(Ile)-lysidine synthase YP_001653314.1 268668 D 471473 CDS YP_001653315.1 166155060 5859045 269794..272535 1 NC_010280.1 cell division protein 272535 ftsH 5859045 ftsH Chlamydia trachomatis L2b/UCH-1/proctitis cell division protein YP_001653315.1 269794 D 471473 CDS YP_001653316.1 166155061 5859526 complement(272750..274837) 1 NC_010280.1 polynucleotide phosphorylase/polyadenylase 274837 pnp 5859526 pnp Chlamydia trachomatis L2b/UCH-1/proctitis polynucleotide phosphorylase/polyadenylase YP_001653316.1 272750 R 471473 CDS YP_001653317.1 166155062 5859767 complement(274866..275135) 1 NC_010280.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 275135 rpsO 5859767 rpsO Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S15 YP_001653317.1 274866 R 471473 CDS YP_001653318.1 166155063 5859765 275361..275852 1 NC_010280.1 cytosine deaminase 275852 5859765 CTLon_0216 Chlamydia trachomatis L2b/UCH-1/proctitis cytosine deaminase YP_001653318.1 275361 D 471473 CDS YP_001653319.1 166155064 5859303 275884..276102 1 NC_010280.1 hypothetical protein 276102 5859303 CTLon_0217 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653319.1 275884 D 471473 CDS YP_001653320.1 166155065 5859302 complement(276074..276778) 1 NC_010280.1 putative integral membrane protein 276778 5859302 CTLon_0218 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653320.1 276074 R 471473 CDS YP_001653321.1 166155066 5859301 complement(276913..277431) 1 NC_010280.1 hypothetical protein 277431 5859301 CTLon_0219 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653321.1 276913 R 471473 CDS YP_001653322.1 166155067 5859300 complement(277444..277950) 1 NC_010280.1 hypothetical protein 277950 5859300 CTLon_0220 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653322.1 277444 R 471473 CDS YP_001653323.1 166155068 5859299 complement(277978..278457) 1 NC_010280.1 hypothetical protein 278457 5859299 CTLon_0221 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653323.1 277978 R 471473 CDS YP_001653324.1 166155069 5859298 278774..278962 1 NC_010280.1 hypothetical protein 278962 5859298 CTLon_0222 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653324.1 278774 D 471473 CDS YP_001653325.1 166155070 5859297 278981..280198 1 NC_010280.1 putative integral membrane protein 280198 5859297 CTLon_0223 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653325.1 278981 D 471473 CDS YP_001653326.1 166155071 5859296 complement(280155..281030) 1 NC_010280.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; methionine aminopeptidase 281030 map 5859296 map Chlamydia trachomatis L2b/UCH-1/proctitis methionine aminopeptidase YP_001653326.1 280155 R 471473 CDS YP_001653327.1 166155072 5859563 complement(281063..281704) 1 NC_010280.1 putative integral membrane protein 281704 5859563 CTLon_0225 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653327.1 281063 R 471473 CDS YP_001653328.1 166155073 5859295 complement(281721..282320) 1 NC_010280.1 putative integral membrane protein 282320 5859295 CTLon_0226 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653328.1 281721 R 471473 CDS YP_001653329.1 166155074 5859294 complement(282515..284284) 1 NC_010280.1 ABC transporter permease 284284 5859294 CTLon_0227 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transporter permease YP_001653329.1 282515 R 471473 CDS YP_001653330.1 166155075 5859537 complement(285811..287514) 1 NC_010280.1 sulfate transporter 287514 5859537 CTLon_0229 Chlamydia trachomatis L2b/UCH-1/proctitis sulfate transporter YP_001653330.1 285811 R 471473 CDS YP_001653331.1 166155076 5859292 complement(287745..287906) 1 NC_010280.1 hypothetical protein 287906 5859292 CTLon_0230 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653331.1 287745 R 471473 CDS YP_001653332.1 166155077 5859291 complement(287946..288155) 1 NC_010280.1 hypothetical protein 288155 5859291 CTLon_0231 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653332.1 287946 R 471473 CDS YP_001653333.1 166155078 5859290 288269..289534 1 NC_010280.1 putative membrane transport protein 289534 5859290 CTLon_0232 Chlamydia trachomatis L2b/UCH-1/proctitis putative membrane transport protein YP_001653333.1 288269 D 471473 CDS YP_001653334.1 166155079 5859289 289644..291449 1 NC_010280.1 putative exported protease 291449 cpa 5859289 cpa Chlamydia trachomatis L2b/UCH-1/proctitis putative exported protease YP_001653334.1 289644 D 471473 CDS YP_001653335.1 166155080 5859349 291544..292467 1 NC_010280.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 292467 ispH 5859349 ispH Chlamydia trachomatis L2b/UCH-1/proctitis 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001653335.1 291544 D 471473 CDS YP_001653336.1 166155081 5859688 complement(292519..294000) 1 NC_010280.1 note that the product of this CDS has been proposed to be a putative type III secretion system translocator; hypothetical protein 294000 copD2 5859688 copD2 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653336.1 292519 R 471473 CDS YP_001653337.1 166155082 5859347 complement(294012..295532) 1 NC_010280.1 putative type III secretion translocator 295532 copB2 5859347 copB2 Chlamydia trachomatis L2b/UCH-1/proctitis putative type III secretion translocator YP_001653337.1 294012 R 471473 CDS YP_001653338.1 166155083 5859338 complement(295560..296156) 1 NC_010280.1 type III secretion chaperone 296156 lcrH 5859338 lcrH Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion chaperone YP_001653338.1 295560 R 471473 CDS YP_001653339.1 166155084 5859680 complement(296078..297526) 1 NC_010280.1 hypothetical protein 297526 5859680 CTLon_0238 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653339.1 296078 R 471473 CDS YP_001653340.1 166155085 5859115 complement(298387..299289) 1 NC_010280.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 299289 xerD 5859115 xerD Chlamydia trachomatis L2b/UCH-1/proctitis site-specific tyrosine recombinase XerD YP_001653340.1 298387 R 471473 CDS YP_001653341.1 166155086 5859723 299537..300526 1 NC_010280.1 hypothetical protein 300526 5859723 CTLon_0240 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653341.1 299537 D 471473 CDS YP_001653342.1 166155087 5859287 300541..302757 1 NC_010280.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 302757 glgB 5859287 glgB Chlamydia trachomatis L2b/UCH-1/proctitis glycogen branching enzyme YP_001653342.1 300541 D 471473 CDS YP_001653343.1 166155088 5859560 complement(302768..303787) 1 NC_010280.1 hypothetical protein 303787 5859560 CTLon_0242 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653343.1 302768 R 471473 CDS YP_001653344.1 166155089 5859286 complement(304014..305225) 1 NC_010280.1 hypothetical protein 305225 5859286 CTLon_0243 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653344.1 304014 R 471473 CDS YP_001653345.1 166155090 5859285 complement(305402..308299) 1 NC_010280.1 polymorphic outer membrane protein 308299 pmpE 5859285 pmpE Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653345.1 305402 R 471473 CDS YP_001653346.1 166155091 5859757 complement(308302..311400) 1 NC_010280.1 polymorphic outer membrane protein 311400 pmpF 5859757 pmpF Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653346.1 308302 R 471473 CDS YP_001653347.1 166155092 5859756 311565..314606 1 NC_010280.1 polymorphic outer membrane protein 314606 pmpG 5859756 pmpG Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653347.1 311565 D 471473 CDS YP_001653348.1 166155093 5859761 314637..317666 1 NC_010280.1 polymorphic outer membrane protein 317666 pmpH 5859761 pmpH Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653348.1 314637 D 471473 CDS YP_001653349.1 166155094 5859763 318081..318677 1 NC_010280.1 hypothetical protein 318677 5859763 CTLon_0248 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653349.1 318081 D 471473 CDS YP_001653350.1 166155095 5859284 complement(318772..321408) 1 NC_010280.1 polymorphic outer membrane protein 321408 pmpI 5859284 pmpI Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653350.1 318772 R 471473 CDS YP_001653351.1 166155096 5859762 321683..323455 1 NC_010280.1 hypothetical protein 323455 5859762 CTLon_0250 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653351.1 321683 D 471473 CDS YP_001653352.1 166155097 5859282 complement(323600..323872) 1 NC_010280.1 hypothetical protein 323872 5859282 CTLon_0251 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653352.1 323600 R 471473 CDS YP_001653353.1 166155098 5859281 324073..324375 1 NC_010280.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 324375 gatC 5859281 gatC Chlamydia trachomatis L2b/UCH-1/proctitis aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001653353.1 324073 D 471473 CDS YP_001653354.1 166155099 5859548 324387..325862 1 NC_010280.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 325862 gatA 5859548 gatA Chlamydia trachomatis L2b/UCH-1/proctitis aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001653354.1 324387 D 471473 CDS YP_001653355.1 166155100 5859539 325864..327330 1 NC_010280.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 327330 gatB 5859539 gatB Chlamydia trachomatis L2b/UCH-1/proctitis aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001653355.1 325864 D 471473 CDS YP_001653356.1 166155101 5859543 complement(327429..328520) 1 NC_010280.1 hypothetical protein 328520 5859543 CTLon_0255 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653356.1 327429 R 471473 CDS YP_001653357.1 166155102 5859280 complement(328648..329217) 1 NC_010280.1 hypothetical protein 329217 5859280 CTLon_0256 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653357.1 328648 R 471473 CDS YP_001653358.1 166155103 5859279 329531..330481 1 NC_010280.1 hypothetical protein 330481 5859279 CTLon_0257 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653358.1 329531 D 471473 CDS YP_001653359.1 166155104 5859278 complement(330497..331399) 1 NC_010280.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 331399 rnhC 5859278 rnhC Chlamydia trachomatis L2b/UCH-1/proctitis ribonuclease HIII YP_001653359.1 330497 R 471473 CDS YP_001653360.1 166155105 5859112 331655..332086 1 NC_010280.1 hypothetical protein 332086 5859112 CTLon_0259 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653360.1 331655 D 471473 CDS YP_001653361.1 166155106 5859277 complement(332073..333440) 1 NC_010280.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 333440 htrB 5859277 htrB Chlamydia trachomatis L2b/UCH-1/proctitis lipid A biosynthesis lauroyl acyltransferase YP_001653361.1 332073 R 471473 CDS YP_001653362.1 166155107 5859233 complement(333572..334828) 1 NC_010280.1 hypothetical protein 334828 5859233 CTLon_0261 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653362.1 333572 R 471473 CDS YP_001653363.1 166155108 5859276 complement(334825..335619) 1 NC_010280.1 putative integral membrane protein 335619 5859276 CTLon_0262 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653363.1 334825 R 471473 CDS YP_001653364.1 166155109 5859272 335894..337234 1 NC_010280.1 cytochrome d ubiquinol oxidase subunit I 337234 cydA 5859272 cydA Chlamydia trachomatis L2b/UCH-1/proctitis cytochrome d ubiquinol oxidase subunit I YP_001653364.1 335894 D 471473 CDS YP_001653365.1 166155110 5859356 337246..338307 1 NC_010280.1 cytochrome d ubiquinol oxidase subunit II 338307 cydB 5859356 cydB Chlamydia trachomatis L2b/UCH-1/proctitis cytochrome d ubiquinol oxidase subunit II YP_001653365.1 337246 D 471473 CDS YP_001653366.1 166155111 5859359 complement(338405..339709) 1 NC_010280.1 hypothetical protein 339709 5859359 CTLon_0265 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653366.1 338405 R 471473 CDS YP_001653367.1 166155112 5859270 339918..340646 1 NC_010280.1 hypothetical protein 340646 5859270 CTLon_0266 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653367.1 339918 D 471473 CDS YP_001653368.1 166155113 5859268 340832..342133 1 NC_010280.1 hypothetical protein 342133 5859268 CTLon_0267 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653368.1 340832 D 471473 CDS YP_001653369.1 166155114 5859267 complement(342195..342668) 1 NC_010280.1 hypothetical protein 342668 5859267 CTLon_0268 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653369.1 342195 R 471473 CDS YP_001653370.1 166155115 5859265 343714..346824 1 NC_010280.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 346824 ileS 5859265 ileS Chlamydia trachomatis L2b/UCH-1/proctitis isoleucyl-tRNA synthetase YP_001653370.1 343714 D 471473 CDS YP_001653371.1 166155116 5859269 complement(346883..348769) 1 NC_010280.1 signal peptidase I 348769 lepB 5859269 lepB Chlamydia trachomatis L2b/UCH-1/proctitis signal peptidase I YP_001653371.1 346883 R 471473 CDS YP_001653372.1 166155117 5859674 complement(348955..349698) 1 NC_010280.1 hypothetical protein 349698 5859674 CTLon_0271 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653372.1 348955 R 471473 CDS YP_001653373.1 166155118 5859264 349774..350100 1 NC_010280.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 350100 rpmE2 5859264 rpmE2 Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L31 type B YP_001653373.1 349774 D 471473 CDS YP_001653374.1 166155119 5859736 350288..351367 1 NC_010280.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 351367 prfA 5859736 prfA Chlamydia trachomatis L2b/UCH-1/proctitis peptide chain release factor 1 YP_001653374.1 350288 D 471473 CDS YP_001653375.1 166155120 5859741 351351..352223 1 NC_010280.1 HemK; PrmC; transfers a methyl group from S-adenosyl-methionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB possibly stimulating release of completed polypeptide chains; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 352223 5859741 CTLon_0274 Chlamydia trachomatis L2b/UCH-1/proctitis N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001653375.1 351351 D 471473 CDS YP_001653376.1 166155121 5859263 352220..353566 1 NC_010280.1 signal recognition particle, subunit FFH/SRP54 353566 ffh 5859263 ffh Chlamydia trachomatis L2b/UCH-1/proctitis signal recognition particle, subunit FFH/SRP54 YP_001653376.1 352220 D 471473 CDS YP_001653377.1 166155122 5859462 353557..353907 1 NC_010280.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 353907 rpsP 5859462 rpsP Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S16 YP_001653377.1 353557 D 471473 CDS YP_001653378.1 166155123 5859643 353923..354981 1 NC_010280.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Chlamydial proteins show a C-terminal extension of unknown function; tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein 354981 trmD 5859643 trmD Chlamydia trachomatis L2b/UCH-1/proctitis tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein YP_001653378.1 353923 D 471473 CDS YP_001653379.1 166155124 5859546 355007..355372 1 NC_010280.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 355372 rplS 5859546 rplS Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L19 YP_001653379.1 355007 D 471473 CDS YP_001653380.1 166155125 5859664 355436..356089 1 NC_010280.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 356089 rnhB 5859664 rnhB Chlamydia trachomatis L2b/UCH-1/proctitis ribonuclease HII YP_001653380.1 355436 D 471473 CDS YP_001653381.1 166155126 5859104 356080..356697 1 NC_010280.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 356697 gmk 5859104 gmk Chlamydia trachomatis L2b/UCH-1/proctitis guanylate kinase YP_001653381.1 356080 D 471473 CDS YP_001653382.1 166155127 5859587 356690..356992 1 NC_010280.1 hypothetical protein 356992 5859587 CTLon_0281 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653382.1 356690 D 471473 CDS YP_001653383.1 166155128 5859262 356992..358644 1 NC_010280.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 358644 metG 5859262 metG Chlamydia trachomatis L2b/UCH-1/proctitis methionyl-tRNA synthetase YP_001653383.1 356992 D 471473 CDS YP_001653384.1 166155129 5859558 complement(358783..361023) 1 NC_010280.1 exodeoxyribonuclease V alpha chain 361023 recD 5859558 recD Chlamydia trachomatis L2b/UCH-1/proctitis exodeoxyribonuclease V alpha chain YP_001653384.1 358783 R 471473 CDS YP_001653385.1 166155130 5858978 complement(361271..362251) 1 NC_010280.1 putative membrane transport/efflux protein 362251 5858978 CTLon_0284 Chlamydia trachomatis L2b/UCH-1/proctitis putative membrane transport/efflux protein YP_001653385.1 361271 R 471473 CDS YP_001653386.1 166155131 5859261 362633..363406 1 NC_010280.1 putative protein ligase 363406 5859261 CTLon_0285 Chlamydia trachomatis L2b/UCH-1/proctitis putative protein ligase YP_001653386.1 362633 D 471473 CDS YP_001653387.1 166155132 5859258 complement(363371..364528) 1 NC_010280.1 hypothetical protein 364528 5859258 CTLon_0286 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653387.1 363371 R 471473 CDS YP_001653388.1 166155133 5859471 complement(365074..365418) 1 NC_010280.1 hypothetical protein 365418 5859471 CTLon_0288 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653388.1 365074 R 471473 CDS YP_001653389.1 166155134 5859254 complement(365440..366012) 1 NC_010280.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 366012 dcd 5859254 dcd Chlamydia trachomatis L2b/UCH-1/proctitis deoxycytidine triphosphate deaminase YP_001653389.1 365440 R 471473 CDS YP_001653390.1 166155135 5859381 366099..366251 1 NC_010280.1 hypothetical protein 366251 5859381 CTLon_0290 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653390.1 366099 D 471473 CDS YP_001653391.1 166155136 5859252 366293..367297 1 NC_010280.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 367297 ruvB 5859252 ruvB Chlamydia trachomatis L2b/UCH-1/proctitis Holliday junction DNA helicase RuvB YP_001653391.1 366293 D 471473 CDS YP_001653392.1 166155137 5859715 367299..368111 1 NC_010280.1 hypothetical protein 368111 5859715 CTLon_0292 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653392.1 367299 D 471473 CDS YP_001653393.1 166155138 5859251 complement(368173..370173) 1 NC_010280.1 putative glycosyl hydrolase 370173 5859251 CTLon_0293 Chlamydia trachomatis L2b/UCH-1/proctitis putative glycosyl hydrolase YP_001653393.1 368173 R 471473 CDS YP_001653394.1 166155139 5859250 complement(370290..370793) 1 NC_010280.1 putative type III secretion system chaperone 370793 5859250 CTLon_0294 Chlamydia trachomatis L2b/UCH-1/proctitis putative type III secretion system chaperone YP_001653394.1 370290 R 471473 CDS YP_001653395.1 166155140 5859249 371259..371732 1 NC_010280.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 371732 ssb 5859249 ssb Chlamydia trachomatis L2b/UCH-1/proctitis single-stranded DNA-binding protein YP_001653395.1 371259 D 471473 CDS YP_001653396.1 166155141 5859649 372075..373574 1 NC_010280.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 373574 5859649 CTLon_0296 Chlamydia trachomatis L2b/UCH-1/proctitis leucyl aminopeptidase YP_001653396.1 372075 D 471473 CDS YP_001653397.1 166155142 5859248 373712..374383 1 NC_010280.1 histone-like protein 2 374383 hct2 5859248 hct2 Chlamydia trachomatis L2b/UCH-1/proctitis histone-like protein 2 YP_001653397.1 373712 D 471473 CDS YP_001653398.1 166155143 5859721 374538..375482 1 NC_010280.1 hypothetical protein 375482 5859721 CTLon_0298 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653398.1 374538 D 471473 CDS YP_001653399.1 166155144 5859246 375577..376290 1 NC_010280.1 hypothetical protein 376290 5859246 CTLon_0299 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653399.1 375577 D 471473 CDS YP_001653400.1 166155145 5859245 376381..377853 1 NC_010280.1 hypothetical protein 377853 5859245 CTLon_0300 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653400.1 376381 D 471473 CDS YP_001653401.1 166155146 5859244 complement(377912..379579) 1 NC_010280.1 hypothetical protein 379579 5859244 CTLon_0301 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653401.1 377912 R 471473 CDS YP_001653402.1 166155147 5859242 complement(379615..381312) 1 NC_010280.1 hypothetical protein 381312 5859242 CTLon_0302 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653402.1 379615 R 471473 CDS YP_001653403.1 166155148 5859241 complement(381374..382504) 1 NC_010280.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 382504 hemN 5859241 hemN Chlamydia trachomatis L2b/UCH-1/proctitis coproporphyrinogen III oxidase YP_001653403.1 381374 R 471473 CDS YP_001653404.1 166155149 5859740 complement(382494..382940) 1 NC_010280.1 hypothetical protein 382940 5859740 CTLon_0304 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653404.1 382494 R 471473 CDS YP_001653405.1 166155150 5859239 383272..385983 1 NC_010280.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 385983 sucA 5859239 sucA Chlamydia trachomatis L2b/UCH-1/proctitis 2-oxoglutarate dehydrogenase E1 component YP_001653405.1 383272 D 471473 CDS YP_001653406.1 166155151 5859656 385987..387084 1 NC_010280.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 387084 sucB 5859656 sucB Chlamydia trachomatis L2b/UCH-1/proctitis dihydrolipoamide succinyltransferase YP_001653406.1 385987 D 471473 CDS YP_001653407.1 166155152 5859511 complement(387113..387844) 1 NC_010280.1 hypothetical protein 387844 5859511 CTLon_0307 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653407.1 387113 R 471473 CDS YP_001653408.1 166155153 5859238 complement(387853..389661) 1 NC_010280.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-clclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; these proteins appear to consist of duplicate domains as compared to Escherichia coli IspG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 389661 gcpE 5859238 gcpE Chlamydia trachomatis L2b/UCH-1/proctitis 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001653408.1 387853 R 471473 CDS YP_001653409.1 166155154 5859552 complement(389813..390904) 1 NC_010280.1 hypothetical protein 390904 5859552 CTLon_0309 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653409.1 389813 R 471473 CDS YP_001653410.1 166155155 5859237 complement(390984..391259) 1 NC_010280.1 ferredoxin 391259 fer 5859237 fer Chlamydia trachomatis L2b/UCH-1/proctitis ferredoxin YP_001653410.1 390984 R 471473 CDS YP_001653411.1 166155156 5859505 391441..393258 1 NC_010280.1 type III secretion system protein 393258 flhA 5859505 flhA Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system protein YP_001653411.1 391441 D 471473 CDS YP_001653412.1 166155157 5859469 393366..394127 1 NC_010280.1 expressed in response to temperature increase; may be involved in expression of genes involved in the developmental cycle of Chlamydia; RNA polymerase sigma factor sigma-28 394127 fliA 5859469 fliA Chlamydia trachomatis L2b/UCH-1/proctitis RNA polymerase sigma factor sigma-28 YP_001653412.1 393366 D 471473 CDS YP_001653413.1 166155158 5859468 394286..395524 1 NC_010280.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 395524 tyrS 5859468 tyrS Chlamydia trachomatis L2b/UCH-1/proctitis tyrosyl-tRNA synthetase YP_001653413.1 394286 D 471473 CDS YP_001653414.1 166155159 5859078 395534..396976 1 NC_010280.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 396976 gnd 5859078 gnd Chlamydia trachomatis L2b/UCH-1/proctitis 6-phosphogluconate dehydrogenase YP_001653414.1 395534 D 471473 CDS YP_001653415.1 166155160 5859603 complement(397037..398845) 1 NC_010280.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 398845 lepA 5859603 lepA Chlamydia trachomatis L2b/UCH-1/proctitis GTP-binding protein LepA YP_001653415.1 397037 R 471473 CDS YP_001653416.1 166155161 5859672 complement(399031..400617) 1 NC_010280.1 ADP,ATP carrier protein 400617 5859672 CTLon_0316 Chlamydia trachomatis L2b/UCH-1/proctitis ADP,ATP carrier protein YP_001653416.1 399031 R 471473 CDS YP_001653417.1 166155162 5859236 complement(400970..401446) 1 NC_010280.1 hypothetical protein 401446 5859236 CTLon_0317 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653417.1 400970 R 471473 CDS YP_001653418.1 166155163 5859234 402107..403087 1 NC_010280.1 ABC transport protein, solute binding component 403087 5859234 CTLon_0318 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transport protein, solute binding component YP_001653418.1 402107 D 471473 CDS YP_001653419.1 166155164 5859231 403080..403859 1 NC_010280.1 ABC transport protein, ATP-binding component 403859 5859231 CTLon_0319 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transport protein, ATP-binding component YP_001653419.1 403080 D 471473 CDS YP_001653420.1 166155165 5859230 403860..405215 1 NC_010280.1 ABC transport protein, membrane permease 405215 5859230 CTLon_0320 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transport protein, membrane permease YP_001653420.1 403860 D 471473 CDS YP_001653421.1 166155166 5859229 405205..406161 1 NC_010280.1 ABC transport protein, membrane permease 406161 5859229 CTLon_0321 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transport protein, membrane permease YP_001653421.1 405205 D 471473 CDS YP_001653422.1 166155167 5859225 406188..407327 1 NC_010280.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 407327 dxr 5859225 dxr Chlamydia trachomatis L2b/UCH-1/proctitis 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001653422.1 406188 D 471473 CDS YP_001653423.1 166155168 5859427 407523..409382 1 NC_010280.1 putative protease 409382 5859427 CTLon_0323 Chlamydia trachomatis L2b/UCH-1/proctitis putative protease YP_001653423.1 407523 D 471473 CDS YP_001653424.1 166155169 5859223 complement(409329..410306) 1 NC_010280.1 exported protein 410306 5859223 CTLon_0324 Chlamydia trachomatis L2b/UCH-1/proctitis exported protein YP_001653424.1 409329 R 471473 CDS YP_001653425.1 166155170 5859222 complement(410464..411561) 1 NC_010280.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 411561 recF 5859222 recF Chlamydia trachomatis L2b/UCH-1/proctitis recombination protein F YP_001653425.1 410464 R 471473 CDS YP_001653426.1 166155171 5858986 complement(411561..412811) 1 NC_010280.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 412811 dnaN 5858986 dnaN Chlamydia trachomatis L2b/UCH-1/proctitis DNA polymerase III subunit beta YP_001653426.1 411561 R 471473 CDS YP_001653427.1 166155172 5859402 412941..413396 1 NC_010280.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 413396 smpB 5859402 smpB Chlamydia trachomatis L2b/UCH-1/proctitis SsrA-binding protein YP_001653427.1 412941 D 471473 CDS YP_001653428.1 166155173 5859271 complement(413374..414324) 1 NC_010280.1 thiamine biosynthesis lipoprotein 414324 apbE 5859271 apbE Chlamydia trachomatis L2b/UCH-1/proctitis thiamine biosynthesis lipoprotein YP_001653428.1 413374 R 471473 CDS YP_001653429.1 166155174 5858864 complement(414294..415157) 1 NC_010280.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 415157 folD 5858864 folD Chlamydia trachomatis L2b/UCH-1/proctitis bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001653429.1 414294 R 471473 CDS YP_001653430.1 166155175 5859517 complement(415275..415670) 1 NC_010280.1 putative integral membrane protein 415670 5859517 CTLon_0330 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653430.1 415275 R 471473 CDS YP_001653431.1 166155176 5859221 415995..416288 1 NC_010280.1 late transcription unit B protein 416288 ltuB 5859221 ltuB Chlamydia trachomatis L2b/UCH-1/proctitis late transcription unit B protein YP_001653431.1 415995 D 471473 CDS YP_001653432.1 166155177 5859574 416321..416641 1 NC_010280.1 hypothetical protein 416641 5859574 CTLon_0332 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653432.1 416321 D 471473 CDS YP_001653433.1 166155178 5859220 416651..418333 1 NC_010280.1 hypothetical protein 418333 5859220 CTLon_0333 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653433.1 416651 D 471473 CDS YP_001653434.1 166155179 5859219 418330..418812 1 NC_010280.1 hypothetical protein 418812 5859219 CTLon_0334 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653434.1 418330 D 471473 CDS YP_001653435.1 166155180 5859217 complement(418826..419911) 1 NC_010280.1 phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein 419911 5859217 CTLon_0335 Chlamydia trachomatis L2b/UCH-1/proctitis phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein YP_001653435.1 418826 R 471473 CDS YP_001653436.1 166155181 5859216 complement(420083..421822) 1 NC_010280.1 putative decarboxylase 421822 5859216 CTLon_0336 Chlamydia trachomatis L2b/UCH-1/proctitis putative decarboxylase YP_001653436.1 420083 R 471473 CDS YP_001653437.1 166155182 5859215 complement(421942..422211) 1 NC_010280.1 required for 70S ribosome assembly; 50S ribosomal protein L28 422211 rpmB 5859215 rpmB Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L28 YP_001653437.1 421942 R 471473 CDS YP_001653438.1 166155183 5859717 complement(422360..423943) 1 NC_010280.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 423943 malQ 5859717 malQ Chlamydia trachomatis L2b/UCH-1/proctitis 4-alpha-glucanotransferase YP_001653438.1 422360 R 471473 CDS YP_001653439.1 166155184 5859569 complement(423947..424387) 1 NC_010280.1 type III secretion chaperone 424387 scc1 5859569 scc1 Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion chaperone YP_001653439.1 423947 R 471473 CDS YP_001653440.1 166155185 5859311 complement(424425..425690) 1 NC_010280.1 low calcium response protein E (TTSS effector protein) 425690 copN 5859311 copN Chlamydia trachomatis L2b/UCH-1/proctitis low calcium response protein E (TTSS effector protein) YP_001653440.1 424425 R 471473 CDS YP_001653441.1 166155186 5859350 complement(425708..427834) 1 NC_010280.1 low calcium response protein D ( to be part of the TTSS apparatus) 427834 lcrD 5859350 lcrD Chlamydia trachomatis L2b/UCH-1/proctitis low calcium response protein D ( to be part of the TTSS apparatus) YP_001653441.1 425708 R 471473 CDS YP_001653442.1 166155187 5859679 complement(427834..428916) 1 NC_010280.1 type III secretion system protein 428916 sctU 5859679 sctU Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system protein YP_001653442.1 427834 R 471473 CDS YP_001653443.1 166155188 5859713 429173..430273 1 NC_010280.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 430273 5859713 CTLon_0343 Chlamydia trachomatis L2b/UCH-1/proctitis GTP-dependent nucleic acid-binding protein EngD YP_001653443.1 429173 D 471473 CDS YP_001653444.1 166155189 5859214 complement(430282..431187) 1 NC_010280.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 431187 ribF 5859214 ribF Chlamydia trachomatis L2b/UCH-1/proctitis bifunctional riboflavin kinase/FMN adenylyltransferase YP_001653444.1 430282 R 471473 CDS YP_001653445.1 166155190 5859087 complement(431144..431869) 1 NC_010280.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 431869 truB 5859087 truB Chlamydia trachomatis L2b/UCH-1/proctitis tRNA pseudouridine synthase B YP_001653445.1 431144 R 471473 CDS YP_001653446.1 166155191 5859346 complement(431907..432278) 1 NC_010280.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 432278 rbfA 5859346 rbfA Chlamydia trachomatis L2b/UCH-1/proctitis ribosome-binding factor A YP_001653446.1 431907 R 471473 CDS YP_001653447.1 166155192 5858942 complement(432285..434975) 1 NC_010280.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 434975 infB 5858942 infB Chlamydia trachomatis L2b/UCH-1/proctitis translation initiation factor IF-2 YP_001653447.1 432285 R 471473 CDS YP_001653448.1 166155193 5859725 complement(434932..436236) 1 NC_010280.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 436236 nusA 5859725 nusA Chlamydia trachomatis L2b/UCH-1/proctitis transcription elongation factor NusA YP_001653448.1 434932 R 471473 CDS YP_001653449.1 166155194 5859444 complement(436354..438063) 1 NC_010280.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 438063 rpsA 5859444 rpsA Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S1 YP_001653449.1 436354 R 471473 CDS YP_001653450.1 166155195 5858858 438308..439363 1 NC_010280.1 thioredoxin reductase 439363 trxB 5858858 trxB Chlamydia trachomatis L2b/UCH-1/proctitis thioredoxin reductase YP_001653450.1 438308 D 471473 CDS YP_001653451.1 166155196 5859321 439369..439728 1 NC_010280.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 439728 acpS 5859321 acpS Chlamydia trachomatis L2b/UCH-1/proctitis 4'-phosphopantetheinyl transferase YP_001653451.1 439369 D 471473 CDS YP_001653452.1 166155197 5858874 complement(439729..440190) 1 NC_010280.1 hypothetical protein 440190 5858874 CTLon_0352 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653452.1 439729 R 471473 CDS YP_001653453.1 166155198 5859213 440326..440787 1 NC_010280.1 hypothetical protein 440787 5859213 CTLon_0353 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653453.1 440326 D 471473 CDS YP_001653454.1 166155199 5859212 440822..441718 1 NC_010280.1 Note the Pfam PF08282;haloacid dehalogenase-like hydrolase motif; hypothetical protein 441718 5859212 CTLon_0354 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653454.1 440822 D 471473 CDS YP_001653455.1 166155200 5859211 complement(441708..442604) 1 NC_010280.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 442604 fabI 5859211 fabI Chlamydia trachomatis L2b/UCH-1/proctitis enoyl-(acyl carrier protein) reductase YP_001653455.1 441708 R 471473 CDS YP_001653456.1 166155201 5859448 442916..444886 1 NC_010280.1 hypothetical protein 444886 5859448 CTLon_0356 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653456.1 442916 D 471473 CDS YP_001653457.1 166155202 5859210 complement(445086..445910) 1 NC_010280.1 tRNA pseudouridine synthase A 445910 5859210 CTLon_0357 Chlamydia trachomatis L2b/UCH-1/proctitis tRNA pseudouridine synthase A YP_001653457.1 445086 R 471473 CDS YP_001653458.1 166155203 5859209 445957..447063 1 NC_010280.1 putative DNA glycosylase 447063 5859209 CTLon_0358 Chlamydia trachomatis L2b/UCH-1/proctitis putative DNA glycosylase YP_001653458.1 445957 D 471473 CDS YP_001653459.1 166155204 5859208 447117..447872 1 NC_010280.1 Note the Pfam PF01784, NIF3 (NGG1p interacting factor 3); hypothetical protein 447872 5859208 CTLon_0359 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653459.1 447117 D 471473 CDS YP_001653460.1 166155205 5859207 complement(447885..448673) 1 NC_010280.1 hypothetical protein 448673 5859207 CTLon_0360 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653460.1 447885 R 471473 CDS YP_001653461.1 166155206 5859206 complement(448802..450436) 1 NC_010280.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 450436 groEL 5859206 groEL Chlamydia trachomatis L2b/UCH-1/proctitis chaperonin GroEL YP_001653461.1 448802 R 471473 CDS YP_001653462.1 166155207 5859256 complement(450475..450783) 1 NC_010280.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 450783 groES 5859256 groES Chlamydia trachomatis L2b/UCH-1/proctitis co-chaperonin GroES YP_001653462.1 450475 R 471473 CDS YP_001653463.1 166155208 5859678 complement(450955..452781) 1 NC_010280.1 oligoendopeptidase F 452781 pepF 5859678 pepF Chlamydia trachomatis L2b/UCH-1/proctitis oligoendopeptidase F YP_001653463.1 450955 R 471473 CDS YP_001653464.1 166155209 5859200 453083..455686 1 NC_010280.1 chaperone-protease ClpB 455686 clpB 5859200 clpB Chlamydia trachomatis L2b/UCH-1/proctitis chaperone-protease ClpB YP_001653464.1 453083 D 471473 CDS YP_001653465.1 166155210 5859323 455712..457172 1 NC_010280.1 hypothetical protein 457172 5859323 CTLon_0365 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653465.1 455712 D 471473 CDS YP_001653466.1 166155211 5859205 457358..457840 1 NC_010280.1 inclusion membrane protein D 457840 incD 5859205 incD Chlamydia trachomatis L2b/UCH-1/proctitis inclusion membrane protein D YP_001653466.1 457358 D 471473 CDS YP_001653467.1 166155212 5859733 457907..458305 1 NC_010280.1 inclusion membrane protein E 458305 incE 5859733 incE Chlamydia trachomatis L2b/UCH-1/proctitis inclusion membrane protein E YP_001653467.1 457907 D 471473 CDS YP_001653468.1 166155213 5859734 458310..458624 1 NC_010280.1 inclusion membrane protein F 458624 incF 5859734 incF Chlamydia trachomatis L2b/UCH-1/proctitis inclusion membrane protein F YP_001653468.1 458310 D 471473 CDS YP_001653469.1 166155214 5859729 458711..459214 1 NC_010280.1 inclusion membrane protein G 459214 incG 5859729 incG Chlamydia trachomatis L2b/UCH-1/proctitis inclusion membrane protein G YP_001653469.1 458711 D 471473 CDS YP_001653470.1 166155215 5859730 complement(459380..460120) 1 NC_010280.1 inclusion membrane protein A 460120 incA 5859730 incA Chlamydia trachomatis L2b/UCH-1/proctitis inclusion membrane protein A YP_001653470.1 459380 R 471473 CDS YP_001653471.1 166155216 5859766 complement(460247..460522) 1 NC_010280.1 hypothetical protein 460522 5859766 CTLon_0371 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653471.1 460247 R 471473 CDS YP_001653472.1 166155217 5859204 460621..461307 1 NC_010280.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 461307 araD 5859204 araD Chlamydia trachomatis L2b/UCH-1/proctitis ribulose-phosphate 3-epimerase YP_001653472.1 460621 D 471473 CDS YP_001653473.1 166155218 5858863 461294..461851 1 NC_010280.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 461851 efp 5858863 efp Chlamydia trachomatis L2b/UCH-1/proctitis elongation factor P YP_001653473.1 461294 D 471473 CDS YP_001653474.1 166155219 5859432 461864..462358 1 NC_010280.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 462358 accB 5859432 accB Chlamydia trachomatis L2b/UCH-1/proctitis acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_001653474.1 461864 D 471473 CDS YP_001653475.1 166155220 5858880 462362..463735 1 NC_010280.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 463735 accC 5858880 accC Chlamydia trachomatis L2b/UCH-1/proctitis acetyl-CoA carboxylase biotin carboxylase subunit YP_001653475.1 462362 D 471473 CDS YP_001653476.1 166155221 5858879 463958..464410 1 NC_010280.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 464410 rplM 5858879 rplM Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L13 YP_001653476.1 463958 D 471473 CDS YP_001653477.1 166155222 5859642 464436..464825 1 NC_010280.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 464825 rpsI 5859642 rpsI Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S9 YP_001653477.1 464436 D 471473 CDS YP_001653478.1 166155223 5859611 complement(464873..465724) 1 NC_010280.1 chitinase 465724 5859611 CTLon_0378 Chlamydia trachomatis L2b/UCH-1/proctitis chitinase YP_001653478.1 464873 R 471473 CDS YP_001653479.1 166155224 5859203 complement(465820..466557) 1 NC_010280.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 466557 adk 5859203 adk Chlamydia trachomatis L2b/UCH-1/proctitis adenylate kinase YP_001653479.1 465820 R 471473 CDS YP_001653480.1 166155225 5858872 466764..467408 1 NC_010280.1 putative ABC-membrane transport protein, inner membrane component 467408 5858872 CTLon_0380 Chlamydia trachomatis L2b/UCH-1/proctitis putative ABC-membrane transport protein, inner membrane component YP_001653480.1 466764 D 471473 CDS YP_001653481.1 166155226 5859202 467405..468106 1 NC_010280.1 ABC transporter, ATP-binding component 468106 5859202 CTLon_0381 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transporter, ATP-binding component YP_001653481.1 467405 D 471473 CDS YP_001653482.1 166155227 5859201 complement(468109..471525) 1 NC_010280.1 hypothetical protein 471525 5859201 CTLon_0382 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653482.1 468109 R 471473 CDS YP_001653483.1 166155228 5859199 complement(471522..472799) 1 NC_010280.1 Note the Pfam PF03631;Ribonuclease BN-like family; hypothetical protein 472799 5859199 CTLon_0383 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653483.1 471522 R 471473 CDS YP_001653484.1 166155229 5859198 complement(472877..473680) 1 NC_010280.1 putative methyltransferase 473680 5859198 CTLon_0384 Chlamydia trachomatis L2b/UCH-1/proctitis putative methyltransferase YP_001653484.1 472877 R 471473 CDS YP_001653485.1 166155230 5859197 474137..474550 1 NC_010280.1 hypothetical protein 474550 5859197 CTLon_0385 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653485.1 474137 D 471473 CDS YP_001653486.1 166155231 5859195 474608..475690 1 NC_010280.1 hypothetical protein 475690 5859195 CTLon_0386 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653486.1 474608 D 471473 CDS YP_001653487.1 166155232 5859194 475780..476499 1 NC_010280.1 members of this family of proteins have a broad spectrum of activity; putative phospholipase-carboxylesterase family protein 476499 5859194 CTLon_0387 Chlamydia trachomatis L2b/UCH-1/proctitis putative phospholipase-carboxylesterase family protein YP_001653487.1 475780 D 471473 CDS YP_001653488.1 166155233 5859193 476518..477363 1 NC_010280.1 note the PFAM motif to yrdC domain PF01300; hypothetical protein 477363 5859193 CTLon_0388 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653488.1 476518 D 471473 CDS YP_001653489.1 166155234 5859192 477341..478288 1 NC_010280.1 microsomal dipeptidase 478288 5859192 CTLon_0389 Chlamydia trachomatis L2b/UCH-1/proctitis microsomal dipeptidase YP_001653489.1 477341 D 471473 CDS YP_001653490.1 166155235 5859191 complement(478285..479565) 1 NC_010280.1 oligopeptide transport system binding protein 479565 oppA 5859191 oppA Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system binding protein YP_001653490.1 478285 R 471473 CDS YP_001653491.1 166155236 5859174 479741..480427 1 NC_010280.1 exported protein 480427 5859174 CTLon_0391 Chlamydia trachomatis L2b/UCH-1/proctitis exported protein YP_001653491.1 479741 D 471473 CDS YP_001653492.1 166155237 5859190 480611..481057 1 NC_010280.1 protein translocase 481057 5859190 CTLon_0392 Chlamydia trachomatis L2b/UCH-1/proctitis protein translocase YP_001653492.1 480611 D 471473 CDS YP_001653493.1 166155238 5859266 481457..482314 1 NC_010280.1 hypothetical protein 482314 5859266 CTLon_0393 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653493.1 481457 D 471473 CDS YP_001653494.1 166155239 5859188 482316..483158 1 NC_010280.1 hypothetical protein 483158 5859188 CTLon_0394 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653494.1 482316 D 471473 CDS YP_001653495.1 166155240 5859187 483158..484024 1 NC_010280.1 hypothetical protein 484024 5859187 CTLon_0395 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653495.1 483158 D 471473 CDS YP_001653496.1 166155241 5859186 484210..486054 1 NC_010280.1 serine-threonine-protein kinase 486054 pkn1 5859186 pkn1 Chlamydia trachomatis L2b/UCH-1/proctitis serine-threonine-protein kinase YP_001653496.1 484210 D 471473 CDS YP_001653497.1 166155242 5859745 486065..488056 1 NC_010280.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 488056 ligA 5859745 ligA Chlamydia trachomatis L2b/UCH-1/proctitis NAD-dependent DNA ligase LigA YP_001653497.1 486065 D 471473 CDS YP_001653498.1 166155243 5859410 488154..492503 1 NC_010280.1 putative integral membrane protein 492503 5859410 CTLon_0398 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653498.1 488154 D 471473 CDS YP_001653499.1 166155244 5859185 complement(492566..494089) 1 NC_010280.1 FAD-dependent monooxygenase 494089 mhpA 5859185 mhpA Chlamydia trachomatis L2b/UCH-1/proctitis FAD-dependent monooxygenase YP_001653499.1 492566 R 471473 CDS YP_001653500.1 166155245 5859554 complement(494289..495236) 1 NC_010280.1 hypothetical protein 495236 5859554 CTLon_0400 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653500.1 494289 R 471473 CDS YP_001653501.1 166155246 5859184 495635..495793 1 NC_010280.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 495793 rpmG 5859184 rpmG Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L33 YP_001653501.1 495635 D 471473 CDS YP_001653502.1 166155247 5858844 495829..497340 1 NC_010280.1 lipoprotein releasing systen, inner membrane component 497340 5858844 CTLon_0402 Chlamydia trachomatis L2b/UCH-1/proctitis lipoprotein releasing systen, inner membrane component YP_001653502.1 495829 D 471473 CDS YP_001653503.1 166155248 5859182 497345..498022 1 NC_010280.1 lipoprotein release ATP-binding component 498022 5859182 CTLon_0403 Chlamydia trachomatis L2b/UCH-1/proctitis lipoprotein release ATP-binding component YP_001653503.1 497345 D 471473 CDS YP_001653504.1 166155249 5859177 complement(498173..500605) 1 NC_010280.1 MAC/perforin family protein 500605 5859177 CTLon_0404 Chlamydia trachomatis L2b/UCH-1/proctitis MAC/perforin family protein YP_001653504.1 498173 R 471473 CDS YP_001653505.1 166155250 5859175 complement(502342..503280) 1 NC_010280.1 phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein 503280 5859175 CTLon_0406 Chlamydia trachomatis L2b/UCH-1/proctitis phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein YP_001653505.1 502342 R 471473 CDS YP_001653506.1 166155251 5859170 complement(503794..504996) 1 NC_010280.1 phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein 504996 5859170 CTLon_0407 Chlamydia trachomatis L2b/UCH-1/proctitis phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein YP_001653506.1 503794 R 471473 CDS YP_001653507.1 166155252 5859167 complement(507345..508091) 1 NC_010280.1 hypothetical protein 508091 5859167 CTLon_0410 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653507.1 507345 R 471473 CDS YP_001653508.1 166155253 5859163 508703..510232 1 NC_010280.1 Note the motifs for calcium binding and calmodulin-binding domain.; hypothetical protein 510232 5859163 CTLon_0412 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653508.1 508703 D 471473 CDS YP_001653509.1 166155254 5859162 510285..510545 1 NC_010280.1 hypothetical protein 510545 5859162 CTLon_0413 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653509.1 510285 D 471473 CDS YP_001653510.1 166155255 5859159 511448..511732 1 NC_010280.1 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 511732 trpR 5859159 trpR Chlamydia trachomatis L2b/UCH-1/proctitis Trp operon repressor YP_001653510.1 511448 D 471473 CDS YP_001653511.1 166155256 5859435 512081..513259 1 NC_010280.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 513259 trpB 5859435 trpB Chlamydia trachomatis L2b/UCH-1/proctitis tryptophan synthase subunit beta YP_001653511.1 512081 D 471473 CDS YP_001653512.1 166155257 5859598 513252..514013 1 NC_010280.1 tryptophan synthase subunit alpha 514013 trpA 5859598 trpA Chlamydia trachomatis L2b/UCH-1/proctitis tryptophan synthase subunit alpha YP_001653512.1 513252 D 471473 CDS YP_001653513.1 166155258 5859438 complement(514204..514725) 1 NC_010280.1 hypothetical protein 514725 5859438 CTLon_0419 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653513.1 514204 R 471473 CDS YP_001653514.1 166155259 5859158 complement(514765..514956) 1 NC_010280.1 hypothetical protein 514956 5859158 CTLon_0420 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653514.1 514765 R 471473 CDS YP_001653515.1 166155260 5859156 515333..516922 1 NC_010280.1 oligopeptide transport system binding protein 516922 oppA2 5859156 oppA2 Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system binding protein YP_001653515.1 515333 D 471473 CDS YP_001653516.1 166155261 5859179 complement(516949..517356) 1 NC_010280.1 putative disulfide oxidoreductase 517356 dsbB 5859179 dsbB Chlamydia trachomatis L2b/UCH-1/proctitis putative disulfide oxidoreductase YP_001653516.1 516949 R 471473 CDS YP_001653517.1 166155262 5859416 complement(517353..518069) 1 NC_010280.1 Note the alternate possible translational start site at codon 27.; disulfide bond chaperone 518069 dsbG 5859416 dsbG Chlamydia trachomatis L2b/UCH-1/proctitis disulfide bond chaperone YP_001653517.1 517353 R 471473 CDS YP_001653518.1 166155263 5859421 518215..519429 1 NC_010280.1 putative integral membrane protein 519429 5859421 CTLon_0425 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653518.1 518215 D 471473 CDS YP_001653519.1 166155264 5859154 complement(519431..519943) 1 NC_010280.1 hypothetical protein 519943 5859154 CTLon_0426 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653519.1 519431 R 471473 CDS YP_001653520.1 166155265 5859153 complement(520087..520779) 1 NC_010280.1 ABC transporter, ATP-binding protein 520779 5859153 CTLon_0427 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transporter, ATP-binding protein YP_001653520.1 520087 R 471473 CDS YP_001653521.1 166155266 5859571 complement(521087..521797) 1 NC_010280.1 hypothetical protein 521797 5859571 CTLon_0428 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653521.1 521087 R 471473 CDS YP_001653522.1 166155267 5859150 522165..522929 1 NC_010280.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 522929 kdsB 5859150 kdsB Chlamydia trachomatis L2b/UCH-1/proctitis 3-deoxy-manno-octulosonate cytidylyltransferase YP_001653522.1 522165 D 471473 CDS YP_001653523.1 166155268 5859683 522905..524524 1 NC_010280.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 524524 pyrG 5859683 pyrG Chlamydia trachomatis L2b/UCH-1/proctitis CTP synthetase YP_001653523.1 522905 D 471473 CDS YP_001653524.1 166155269 5858915 524511..524957 1 NC_010280.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 524957 5858915 CTLon_0431 Chlamydia trachomatis L2b/UCH-1/proctitis Holliday junction resolvase-like protein YP_001653524.1 524511 D 471473 CDS YP_001653525.1 166155270 5859149 525074..526597 1 NC_010280.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 526597 zwf 5859149 zwf Chlamydia trachomatis L2b/UCH-1/proctitis glucose-6-phosphate 1-dehydrogenase YP_001653525.1 525074 D 471473 CDS YP_001653526.1 166155271 5859422 526622..527392 1 NC_010280.1 6-phosphogluconolactonase 527392 devB 5859422 devB Chlamydia trachomatis L2b/UCH-1/proctitis 6-phosphogluconolactonase YP_001653526.1 526622 D 471473 CDS YP_001653527.1 166155272 5859383 complement(527389..528261) 1 NC_010280.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 528261 dnaX 5859383 dnaX Chlamydia trachomatis L2b/UCH-1/proctitis DNA polymerase III subunit delta' YP_001653527.1 527389 R 471473 CDS YP_001653528.1 166155273 5859405 complement(528275..528886) 1 NC_010280.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 528886 tmk 5859405 tmk Chlamydia trachomatis L2b/UCH-1/proctitis thymidylate kinase YP_001653528.1 528275 R 471473 CDS YP_001653529.1 166155274 5859599 complement(528888..531398) 1 NC_010280.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 531398 gyrA 5859599 gyrA Chlamydia trachomatis L2b/UCH-1/proctitis DNA gyrase subunit A YP_001653529.1 528888 R 471473 CDS YP_001653530.1 166155275 5859695 complement(531413..533827) 1 NC_010280.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 533827 gyrB 5859695 gyrB Chlamydia trachomatis L2b/UCH-1/proctitis DNA gyrase subunit B YP_001653530.1 531413 R 471473 CDS YP_001653531.1 166155276 5859707 complement(533830..534180) 1 NC_010280.1 hypothetical protein 534180 5859707 CTLon_0438 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653531.1 533830 R 471473 CDS YP_001653532.1 166155277 5859147 complement(534327..535022) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 535022 5859147 CTLon_0439 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653532.1 534327 R 471473 CDS YP_001653533.1 166155278 5859146 complement(535126..536244) 1 NC_010280.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4, 5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7- deazaguanosine); queuine tRNA-ribosyltransferase 536244 tgt 5859146 tgt Chlamydia trachomatis L2b/UCH-1/proctitis queuine tRNA-ribosyltransferase YP_001653533.1 535126 R 471473 CDS YP_001653534.1 166155279 5859243 complement(536371..537783) 1 NC_010280.1 magnesium transport protein 537783 mgtE 5859243 mgtE Chlamydia trachomatis L2b/UCH-1/proctitis magnesium transport protein YP_001653534.1 536371 R 471473 CDS YP_001653535.1 166155280 5859553 complement(538223..539314) 1 NC_010280.1 putative integral membrane protein 539314 5859553 CTLon_0442 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653535.1 538223 R 471473 CDS YP_001653536.1 166155281 5859144 539540..539860 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 539860 5859144 CTLon_0443 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653536.1 539540 D 471473 CDS YP_001653537.1 166155282 5859143 539936..540952 1 NC_010280.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 540952 gcp 5859143 gcp Chlamydia trachomatis L2b/UCH-1/proctitis putative DNA-binding/iron metalloprotein/AP endonuclease YP_001653537.1 539936 D 471473 CDS YP_001653538.1 166155283 5859547 540916..542472 1 NC_010280.1 oligopeptide transport system binding protein 542472 oppA3 5859547 oppA3 Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system binding protein YP_001653538.1 540916 D 471473 CDS YP_001653539.1 166155284 5859141 542631..543572 1 NC_010280.1 oligopeptide transport system membrane permease 543572 oppB 5859141 oppB Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system membrane permease YP_001653539.1 542631 D 471473 CDS YP_001653540.1 166155285 5858914 543604..544449 1 NC_010280.1 oligopeptide transport system membrane permease 544449 oppC 5858914 oppC Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system membrane permease YP_001653540.1 543604 D 471473 CDS YP_001653541.1 166155286 5859165 544442..545275 1 NC_010280.1 oligopeptide transport system ATP-binding protein 545275 oppD 5859165 oppD Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system ATP-binding protein YP_001653541.1 544442 D 471473 CDS YP_001653542.1 166155287 5859095 545290..546033 1 NC_010280.1 oligopeptide transport system ATP-binding protein 546033 oppF 5859095 oppF Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system ATP-binding protein YP_001653542.1 545290 D 471473 CDS YP_001653543.1 166155288 5859164 546345..547094 1 NC_010280.1 hypothetical protein 547094 5859164 CTLon_0450 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653543.1 546345 D 471473 CDS YP_001653544.1 166155289 5859142 547124..548539 1 NC_010280.1 sodium:sulfate symporter 548539 5859142 CTLon_0451 Chlamydia trachomatis L2b/UCH-1/proctitis sodium:sulfate symporter YP_001653544.1 547124 D 471473 CDS YP_001653545.1 166155290 5859140 548559..550220 1 NC_010280.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 550220 pfkA 5859140 pfkA Chlamydia trachomatis L2b/UCH-1/proctitis diphosphate--fructose-6-phosphate 1-phosphotransferase YP_001653545.1 548559 D 471473 CDS YP_001653546.1 166155291 5859333 550229..551077 1 NC_010280.1 hypothetical protein 551077 5859333 CTLon_0453 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653546.1 550229 D 471473 CDS YP_001653547.1 166155292 5859139 551059..552705 1 NC_010280.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 552705 pfkA_2 5859139 pfkA_2 Chlamydia trachomatis L2b/UCH-1/proctitis diphosphate--fructose-6-phosphate 1-phosphotransferase YP_001653547.1 551059 D 471473 CDS YP_001653548.1 166155293 5859704 complement(552951..554246) 1 NC_010280.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 554246 gseA 5859704 gseA Chlamydia trachomatis L2b/UCH-1/proctitis 3-deoxy-D-manno-octulosonic-acid transferase YP_001653548.1 552951 R 471473 CDS YP_001653549.1 166155294 5859682 complement(554243..556702) 1 NC_010280.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 556702 leuS 5859682 leuS Chlamydia trachomatis L2b/UCH-1/proctitis leucyl-tRNA synthetase YP_001653549.1 554243 R 471473 CDS YP_001653550.1 166155295 5859653 556900..558168 1 NC_010280.1 catalyzes the formation of 5-aminolevulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde aminotransferase 558168 hemL 5859653 hemL Chlamydia trachomatis L2b/UCH-1/proctitis glutamate-1-semialdehyde aminotransferase YP_001653550.1 556900 D 471473 CDS YP_001653551.1 166155296 5859737 complement(558160..558729) 1 NC_010280.1 hypothetical protein 558729 5859737 CTLon_0458 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653551.1 558160 R 471473 CDS YP_001653552.1 166155297 5859138 complement(558749..559195) 1 NC_010280.1 hypothetical protein 559195 5859138 CTLon_0459 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653552.1 558749 R 471473 CDS YP_001653553.1 166155298 5859137 complement(559185..559913) 1 NC_010280.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 559913 rpiA 5859137 rpiA Chlamydia trachomatis L2b/UCH-1/proctitis ribose-5-phosphate isomerase A YP_001653553.1 559185 R 471473 CDS YP_001653554.1 166155299 5859310 complement(560008..561651) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 561651 5859310 CTLon_0461 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653554.1 560008 R 471473 CDS YP_001653555.1 166155300 5859135 561955..563001 1 NC_010280.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 563001 dhnA 5859135 dhnA Chlamydia trachomatis L2b/UCH-1/proctitis fructose-bisphosphate aldolase YP_001653555.1 561955 D 471473 CDS YP_001653556.1 166155301 5859386 563015..564415 1 NC_010280.1 glutamate/gamma-aminobutyrate antiporter 564415 xasA 5859386 xasA Chlamydia trachomatis L2b/UCH-1/proctitis glutamate/gamma-aminobutyrate antiporter YP_001653556.1 563015 D 471473 CDS YP_001653557.1 166155302 5858862 564509..565273 1 NC_010280.1 hypothetical protein 565273 5858862 CTLon_0464 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653557.1 564509 D 471473 CDS YP_001653558.1 166155303 5859134 565404..566255 1 NC_010280.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 566255 surE 5859134 surE Chlamydia trachomatis L2b/UCH-1/proctitis stationary phase survival protein SurE YP_001653558.1 565404 D 471473 CDS YP_001653559.1 166155304 5859651 566367..567275 1 NC_010280.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 567275 ubiA 5859651 ubiA Chlamydia trachomatis L2b/UCH-1/proctitis prenyltransferase YP_001653559.1 566367 D 471473 CDS YP_001653560.1 166155305 5859760 567272..567850 1 NC_010280.1 aromatic acid decarboxylase 567850 5859760 CTLon_0467 Chlamydia trachomatis L2b/UCH-1/proctitis aromatic acid decarboxylase YP_001653560.1 567272 D 471473 CDS YP_001653561.1 166155306 5859130 complement(567847..568743) 1 NC_010280.1 hypothetical protein 568743 5859130 CTLon_0468 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653561.1 567847 R 471473 CDS YP_001653562.1 166155307 5859334 complement(569033..569173) 1 NC_010280.1 hypothetical protein 569173 5859334 CTLon_0469 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653562.1 569033 R 471473 CDS YP_001653563.1 166155308 5859128 complement(569200..569586) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 569586 5859128 CTLon_0470 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653563.1 569200 R 471473 CDS YP_001653564.1 166155309 5859127 complement(569728..570534) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 570534 5859127 CTLon_0471 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653564.1 569728 R 471473 CDS YP_001653565.1 166155310 5859123 complement(570926..571369) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 571369 5859123 CTLon_0472 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653565.1 570926 R 471473 CDS YP_001653566.1 166155311 5859122 complement(571477..571845) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 571845 5859122 CTLon_0473 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653566.1 571477 R 471473 CDS YP_001653567.1 166155312 5859121 complement(571944..572459) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 572459 5859121 CTLon_0474 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653567.1 571944 R 471473 CDS YP_001653568.1 166155313 5859118 complement(572588..572989) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 572989 5859118 CTLon_0475 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653568.1 572588 R 471473 CDS YP_001653569.1 166155314 5859117 complement(573270..573860) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 573860 5859117 CTLon_0476 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653569.1 573270 R 471473 CDS YP_001653570.1 166155315 5859116 complement(574010..574657) 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 574657 5859116 CTLon_0477 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653570.1 574010 R 471473 CDS YP_001653571.1 166155316 5859114 574883..576130 1 NC_010280.1 putative sodium:dicarboxylate symport protein 576130 5859114 CTLon_0478 Chlamydia trachomatis L2b/UCH-1/proctitis putative sodium:dicarboxylate symport protein YP_001653571.1 574883 D 471473 CDS YP_001653572.1 166155317 5859113 576314..577786 1 NC_010280.1 sodium-dependent amino acid transporter 577786 5859113 CTLon_0479 Chlamydia trachomatis L2b/UCH-1/proctitis sodium-dependent amino acid transporter YP_001653572.1 576314 D 471473 CDS YP_001653573.1 166155318 5859111 577891..578238 1 NC_010280.1 inclusion membrane protein B 578238 incB 5859111 incB Chlamydia trachomatis L2b/UCH-1/proctitis inclusion membrane protein B YP_001653573.1 577891 D 471473 CDS YP_001653574.1 166155319 5859630 578315..578851 1 NC_010280.1 inclusion membrane protein C 578851 incC 5859630 incC Chlamydia trachomatis L2b/UCH-1/proctitis inclusion membrane protein C YP_001653574.1 578315 D 471473 CDS YP_001653575.1 166155320 5859738 578909..581695 1 NC_010280.1 putative membrane transport protein 581695 5859738 CTLon_0482 Chlamydia trachomatis L2b/UCH-1/proctitis putative membrane transport protein YP_001653575.1 578909 D 471473 CDS YP_001653576.1 166155321 5859110 581724..582137 1 NC_010280.1 Crp family transcriptional regulator 582137 5859110 CTLon_0483 Chlamydia trachomatis L2b/UCH-1/proctitis Crp family transcriptional regulator YP_001653576.1 581724 D 471473 CDS YP_001653577.1 166155322 5859109 complement(582198..582431) 1 NC_010280.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 582431 acpP 5859109 acpP Chlamydia trachomatis L2b/UCH-1/proctitis acyl carrier protein YP_001653577.1 582198 R 471473 CDS YP_001653578.1 166155323 5858877 complement(582800..583546) 1 NC_010280.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 583546 fabG 5858877 fabG Chlamydia trachomatis L2b/UCH-1/proctitis 3-ketoacyl-(acyl-carrier-protein) reductase YP_001653578.1 582800 R 471473 CDS YP_001653579.1 166155324 5859445 complement(583543..584469) 1 NC_010280.1 malonyl-CoA-[acyl-carrier-protein] transacylase 584469 fabD 5859445 fabD Chlamydia trachomatis L2b/UCH-1/proctitis malonyl-CoA-[acyl-carrier-protein] transacylase YP_001653579.1 583543 R 471473 CDS YP_001653580.1 166155325 5859436 complement(584486..585469) 1 NC_010280.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 585469 fabH 5859436 fabH Chlamydia trachomatis L2b/UCH-1/proctitis 3-oxoacyl-(acyl carrier protein) synthase III YP_001653580.1 584486 R 471473 CDS YP_001653581.1 166155326 5859442 585607..586209 1 NC_010280.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 586209 recR 5859442 recR Chlamydia trachomatis L2b/UCH-1/proctitis recombination protein RecR YP_001653581.1 585607 D 471473 CDS YP_001653582.1 166155327 5859015 586583..588961 1 NC_010280.1 outer membrane protein (variable surface antigen) 588961 5859015 CTLon_0489 Chlamydia trachomatis L2b/UCH-1/proctitis outer membrane protein (variable surface antigen) YP_001653582.1 586583 D 471473 CDS YP_001653583.1 166155328 5859108 589028..589549 1 NC_010280.1 Outer membrane protein 589549 ompH 5859108 ompH Chlamydia trachomatis L2b/UCH-1/proctitis Outer membrane protein YP_001653583.1 589028 D 471473 CDS YP_001653584.1 166155329 5859178 589577..590641 1 NC_010280.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 590641 lpxD 5859178 lpxD Chlamydia trachomatis L2b/UCH-1/proctitis UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001653584.1 589577 D 471473 CDS YP_001653585.1 166155330 5859586 complement(590638..591834) 1 NC_010280.1 hypothetical protein 591834 5859586 CTLon_0492 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653585.1 590638 R 471473 CDS YP_001653586.1 166155331 5859106 592056..593078 1 NC_010280.1 pyruvate dehydrogenase E1 component alpha subunit 593078 pdhA 5859106 pdhA Chlamydia trachomatis L2b/UCH-1/proctitis pyruvate dehydrogenase E1 component alpha subunit YP_001653586.1 592056 D 471473 CDS YP_001653587.1 166155332 5859581 593071..594057 1 NC_010280.1 pyruvate dehydrogenase E1 component beta subunit 594057 pdhB 5859581 pdhB Chlamydia trachomatis L2b/UCH-1/proctitis pyruvate dehydrogenase E1 component beta subunit YP_001653587.1 593071 D 471473 CDS YP_001653588.1 166155333 5859133 594062..595351 1 NC_010280.1 branched-chain alpha-keto acid dehydrogenase subunit E2 595351 pdhC 5859133 pdhC Chlamydia trachomatis L2b/UCH-1/proctitis branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001653588.1 594062 D 471473 CDS YP_001653589.1 166155334 5859196 complement(595378..597822) 1 NC_010280.1 glycogen phosphorylase 597822 glgP 5859196 glgP Chlamydia trachomatis L2b/UCH-1/proctitis glycogen phosphorylase YP_001653589.1 595378 R 471473 CDS YP_001653590.1 166155335 5859565 597978..598328 1 NC_010280.1 hypothetical protein 598328 5859565 CTLon_0497 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653590.1 597978 D 471473 CDS YP_001653591.1 166155336 5859105 complement(598382..599752) 1 NC_010280.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 599752 dnaA 5859105 dnaA Chlamydia trachomatis L2b/UCH-1/proctitis chromosomal replication initiation protein YP_001653591.1 598382 R 471473 CDS YP_001653592.1 166155337 5859388 complement(599829..602192) 1 NC_010280.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 602192 oxaA 5859388 oxaA Chlamydia trachomatis L2b/UCH-1/proctitis putative inner membrane protein translocase component YidC YP_001653592.1 599829 R 471473 CDS YP_001653593.1 166155338 5859083 complement(602502..603320) 1 NC_010280.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 603320 lgt 5859083 lgt Chlamydia trachomatis L2b/UCH-1/proctitis prolipoprotein diacylglyceryl transferase YP_001653593.1 602502 R 471473 CDS YP_001653594.1 166155339 5859661 603571..604218 1 NC_010280.1 putative lipoprotein 604218 5859661 CTLon_0501 Chlamydia trachomatis L2b/UCH-1/proctitis putative lipoprotein YP_001653594.1 603571 D 471473 CDS YP_001653595.1 166155340 5859103 604222..604992 1 NC_010280.1 inner membrane protein 604992 5859103 CTLon_0502 Chlamydia trachomatis L2b/UCH-1/proctitis inner membrane protein YP_001653595.1 604222 D 471473 CDS YP_001653596.1 166155341 5859102 complement(605200..605583) 1 NC_010280.1 hypothetical protein 605583 5859102 CTLon_0503 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653596.1 605200 R 471473 CDS YP_001653597.1 166155342 5859101 605772..607016 1 NC_010280.1 putative membrane transport protein 607016 5859101 CTLon_0504 Chlamydia trachomatis L2b/UCH-1/proctitis putative membrane transport protein YP_001653597.1 605772 D 471473 CDS YP_001653598.1 166155343 5859100 607006..608220 1 NC_010280.1 hypothetical protein 608220 5859100 CTLon_0505 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653598.1 607006 D 471473 CDS YP_001653599.1 166155344 5859099 complement(608224..609348) 1 NC_010280.1 putative cysteine desulfurase 609348 5859099 CTLon_0506 Chlamydia trachomatis L2b/UCH-1/proctitis putative cysteine desulfurase YP_001653599.1 608224 R 471473 CDS YP_001653600.1 166155345 5859098 complement(609354..610100) 1 NC_010280.1 protein phosphatase 2C 610100 5859098 CTLon_0507 Chlamydia trachomatis L2b/UCH-1/proctitis protein phosphatase 2C YP_001653600.1 609354 R 471473 CDS YP_001653601.1 166155346 5859097 610419..610910 1 NC_010280.1 hypothetical protein 610910 5859097 CTLon_0508 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653601.1 610419 D 471473 CDS YP_001653602.1 166155347 5859096 610919..611617 1 NC_010280.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 611617 dnaQ 5859096 dnaQ Chlamydia trachomatis L2b/UCH-1/proctitis DNA polymerase III subunit epsilon YP_001653602.1 610919 D 471473 CDS YP_001653603.1 166155348 5859404 611614..612384 1 NC_010280.1 hypothetical protein 612384 5859404 CTLon_0510 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653603.1 611614 D 471473 CDS YP_001653604.1 166155349 5859094 612377..612967 1 NC_010280.1 hypothetical protein 612967 5859094 CTLon_0511 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653604.1 612377 D 471473 CDS YP_001653605.1 166155350 5859091 complement(612988..614928) 1 NC_010280.1 ABC transporter, ATP-binding and membrane components 614928 5859091 CTLon_0512 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transporter, ATP-binding and membrane components YP_001653605.1 612988 R 471473 CDS YP_001653606.1 166155351 5859090 complement(614894..615868) 1 NC_010280.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 615868 accA 5859090 accA Chlamydia trachomatis L2b/UCH-1/proctitis acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001653606.1 614894 R 471473 CDS YP_001653607.1 166155352 5858881 complement(616001..617182) 1 NC_010280.1 hypothetical protein 617182 5858881 CTLon_0514 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653607.1 616001 R 471473 CDS YP_001653608.1 166155353 5859089 complement(617300..617602) 1 NC_010280.1 integration host factor alpha-subunit 617602 ihfA 5859089 ihfA Chlamydia trachomatis L2b/UCH-1/proctitis integration host factor alpha-subunit YP_001653608.1 617300 R 471473 CDS YP_001653609.1 166155354 5859181 complement(617822..618601) 1 NC_010280.1 N-acetylmuramoyl-L-alanine amidase 618601 amiA 5859181 amiA Chlamydia trachomatis L2b/UCH-1/proctitis N-acetylmuramoyl-L-alanine amidase YP_001653609.1 617822 R 471473 CDS YP_001653610.1 166155355 5858867 complement(618516..619967) 1 NC_010280.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 619967 murE 5858867 murE Chlamydia trachomatis L2b/UCH-1/proctitis UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001653610.1 618516 R 471473 CDS YP_001653611.1 166155356 5859523 complement(620290..622233) 1 NC_010280.1 penicillin-binding protein 622233 pbp 5859523 pbp Chlamydia trachomatis L2b/UCH-1/proctitis penicillin-binding protein YP_001653611.1 620290 R 471473 CDS YP_001653612.1 166155357 5858911 complement(622220..622507) 1 NC_010280.1 hypothetical protein 622507 5858911 CTLon_0519 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653612.1 622220 R 471473 CDS YP_001653613.1 166155358 5859086 complement(622507..623409) 1 NC_010280.1 S-adenosyl-methyltransferase MraW 623409 mraW 5859086 mraW Chlamydia trachomatis L2b/UCH-1/proctitis S-adenosyl-methyltransferase MraW YP_001653613.1 622507 R 471473 CDS YP_001653614.1 166155359 5859541 623687..624253 1 NC_010280.1 hypothetical protein 624253 5859541 CTLon_0521 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653614.1 623687 D 471473 CDS YP_001653615.1 166155360 5859085 624260..624679 1 NC_010280.1 hypothetical protein 624679 5859085 CTLon_0522 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653615.1 624260 D 471473 CDS YP_001653616.1 166155361 5859082 624921..626288 1 NC_010280.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 626288 dnaA 5859082 dnaA Chlamydia trachomatis L2b/UCH-1/proctitis chromosomal replication initiation protein YP_001653616.1 624921 D 471473 CDS YP_001653617.1 166155362 5859391 626340..626924 1 NC_010280.1 hypothetical protein 626924 5859391 CTLon_0524 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653617.1 626340 D 471473 CDS YP_001653618.1 166155363 5859081 complement(626896..627555) 1 NC_010280.1 hypothetical protein 627555 5859081 CTLon_0525 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653618.1 626896 R 471473 CDS YP_001653619.1 166155364 5859077 627557..629068 1 NC_010280.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 629068 nqrB 5859077 nqrB Chlamydia trachomatis L2b/UCH-1/proctitis Na(+)-translocating NADH-quinone reductase subunit B YP_001653619.1 627557 D 471473 CDS YP_001653620.1 166155365 5859463 629072..630022 1 NC_010280.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 630022 nqrC 5859463 nqrC Chlamydia trachomatis L2b/UCH-1/proctitis Na(+)-translocating NADH-quinone reductase subunit C YP_001653620.1 629072 D 471473 CDS YP_001653621.1 166155366 5859467 630012..630653 1 NC_010280.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 630653 nqrD 5859467 nqrD Chlamydia trachomatis L2b/UCH-1/proctitis Na(+)-translocating NADH-quinone reductase subunit D YP_001653621.1 630012 D 471473 CDS YP_001653622.1 166155367 5859458 630659..631393 1 NC_010280.1 Na(+)-translocating NADH-quinone reductase subunit E 631393 nqrE 5859458 nqrE Chlamydia trachomatis L2b/UCH-1/proctitis Na(+)-translocating NADH-quinone reductase subunit E YP_001653622.1 630659 D 471473 CDS YP_001653623.1 166155368 5859461 complement(631417..631770) 1 NC_010280.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 631770 gcsH 5859461 gcsH Chlamydia trachomatis L2b/UCH-1/proctitis glycine cleavage system protein H YP_001653623.1 631417 R 471473 CDS YP_001653624.1 166155369 5859557 complement(631790..633862) 1 NC_010280.1 hypothetical protein 633862 5859557 CTLon_0531 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653624.1 631790 R 471473 CDS YP_001653625.1 166155370 5859076 complement(634057..635481) 1 NC_010280.1 phospholipase D 635481 5859076 CTLon_0532 Chlamydia trachomatis L2b/UCH-1/proctitis phospholipase D YP_001653625.1 634057 R 471473 CDS YP_001653626.1 166155371 5859075 complement(635487..636206) 1 NC_010280.1 lipoate-protein ligase A 636206 lplA 5859075 lplA Chlamydia trachomatis L2b/UCH-1/proctitis lipoate-protein ligase A YP_001653626.1 635487 R 471473 CDS YP_001653627.1 166155372 5859632 636471..639035 1 NC_010280.1 ATP-dependent Clp protease 639035 clpC 5859632 clpC Chlamydia trachomatis L2b/UCH-1/proctitis ATP-dependent Clp protease YP_001653627.1 636471 D 471473 CDS YP_001653628.1 166155373 5859322 complement(639016..640092) 1 NC_010280.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 640092 mnmA 5859322 mnmA Chlamydia trachomatis L2b/UCH-1/proctitis tRNA-specific 2-thiouridylase MnmA YP_001653628.1 639016 R 471473 CDS YP_001653629.1 166155374 5859358 640323..642017 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 642017 5859358 CTLon_0536 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653629.1 640323 D 471473 CDS YP_001653630.1 166155375 5859074 complement(642104..643249) 1 NC_010280.1 hypothetical protein 643249 5859074 CTLon_0537 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653630.1 642104 R 471473 CDS YP_001653631.1 166155376 5859073 complement(643306..643983) 1 NC_010280.1 PTS family membrane transport protein IIA subunit 643983 5859073 CTLon_0538 Chlamydia trachomatis L2b/UCH-1/proctitis PTS family membrane transport protein IIA subunit YP_001653631.1 643306 R 471473 CDS YP_001653632.1 166155377 5859071 complement(643986..644462) 1 NC_010280.1 PTS family membrane transport protein IIA subunit 644462 ptsN_2 5859071 ptsN_2 Chlamydia trachomatis L2b/UCH-1/proctitis PTS family membrane transport protein IIA subunit YP_001653632.1 643986 R 471473 CDS YP_001653633.1 166155378 5858910 complement(644464..644901) 1 NC_010280.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 644901 dut 5858910 dut Chlamydia trachomatis L2b/UCH-1/proctitis deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001653633.1 644464 R 471473 CDS YP_001653634.1 166155379 5859424 complement(644938..645864) 1 NC_010280.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 645864 accD 5859424 accD Chlamydia trachomatis L2b/UCH-1/proctitis acetyl-CoA carboxylase subunit beta YP_001653634.1 644938 R 471473 CDS YP_001653635.1 166155380 5858878 complement(645935..646555) 1 NC_010280.1 superoxide dismutase 646555 sodM 5858878 sodM Chlamydia trachomatis L2b/UCH-1/proctitis superoxide dismutase YP_001653635.1 645935 R 471473 CDS YP_001653636.1 166155381 5859509 complement(646687..648468) 1 NC_010280.1 phosphoglucomutase 648468 mrsA 5859509 mrsA Chlamydia trachomatis L2b/UCH-1/proctitis phosphoglucomutase YP_001653636.1 646687 R 471473 CDS YP_001653637.1 166155382 5859533 complement(648620..649087) 1 NC_010280.1 hypothetical protein 649087 5859533 CTLon_0544 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653637.1 648620 R 471473 CDS YP_001653638.1 166155383 5859070 649196..649891 1 NC_010280.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 649891 rnc 5859070 rnc Chlamydia trachomatis L2b/UCH-1/proctitis ribonuclease III YP_001653638.1 649196 D 471473 CDS YP_001653639.1 166155384 5859107 649875..651239 1 NC_010280.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 651239 radA 5859107 radA Chlamydia trachomatis L2b/UCH-1/proctitis DNA repair protein RadA YP_001653639.1 649875 D 471473 CDS YP_001653640.1 166155385 5858927 651283..651942 1 NC_010280.1 transformation of prophobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 651942 hemC 5858927 hemC Chlamydia trachomatis L2b/UCH-1/proctitis porphobilinogen deaminase YP_001653640.1 651283 D 471473 CDS YP_001653641.1 166155386 5859069 complement(652738..655542) 1 NC_010280.1 PknD; responsible for phosphorylation of proteins on serine and threonine residues; similar to eukaryotic Ser/Thr kinases; in Chlamydia trachomatis itseems to interact with Pkn1, another serine/threonine-protein kinase; serine/threonine-protein kinase 655542 pknD 5859069 pknD Chlamydia trachomatis L2b/UCH-1/proctitis serine/threonine-protein kinase YP_001653641.1 652738 R 471473 CDS YP_001653642.1 166155387 5859747 complement(655557..658376) 1 NC_010280.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 658376 valS 5859747 valS Chlamydia trachomatis L2b/UCH-1/proctitis valyl-tRNA synthetase YP_001653642.1 655557 R 471473 CDS YP_001653643.1 166155388 5859719 complement(658503..659018) 1 NC_010280.1 hypothetical protein 659018 5859719 CTLon_0551 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653643.1 658503 R 471473 CDS YP_001653644.1 166155389 5859068 complement(658939..659364) 1 NC_010280.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K 659364 atpK 5859068 atpK Chlamydia trachomatis L2b/UCH-1/proctitis V-type ATP synthase subunit K YP_001653644.1 658939 R 471473 CDS YP_001653645.1 166155390 5859596 complement(659426..661375) 1 NC_010280.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I 661375 atpI 5859596 atpI Chlamydia trachomatis L2b/UCH-1/proctitis V-type ATP synthase subunit I YP_001653645.1 659426 R 471473 CDS YP_001653646.1 166155391 5859608 complement(661381..661992) 1 NC_010280.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D 661992 atpD 5859608 atpD Chlamydia trachomatis L2b/UCH-1/proctitis V-type ATP synthase subunit D YP_001653646.1 661381 R 471473 CDS YP_001653647.1 166155392 5859645 complement(661977..663293) 1 NC_010280.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B 663293 atpB 5859645 atpB Chlamydia trachomatis L2b/UCH-1/proctitis V-type ATP synthase subunit B YP_001653647.1 661977 R 471473 CDS YP_001653648.1 166155393 5858840 complement(663296..665071) 1 NC_010280.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A 665071 atpA 5858840 atpA Chlamydia trachomatis L2b/UCH-1/proctitis V-type ATP synthase subunit A YP_001653648.1 663296 R 471473 CDS YP_001653649.1 166155394 5858841 complement(665065..665865) 1 NC_010280.1 hypothetical protein 665865 5858841 CTLon_0557 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653649.1 665065 R 471473 CDS YP_001653650.1 166155395 5859067 complement(666032..666658) 1 NC_010280.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the E subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit E 666658 atpE 5859067 atpE Chlamydia trachomatis L2b/UCH-1/proctitis V-type ATP synthase subunit E YP_001653650.1 666032 R 471473 CDS YP_001653651.1 166155396 5859650 666767..667477 1 NC_010280.1 hypothetical protein 667477 5859650 CTLon_0559 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653651.1 666767 D 471473 CDS YP_001653652.1 166155397 5859066 complement(667485..667856) 1 NC_010280.1 hypothetical protein 667856 5859066 CTLon_0560 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653652.1 667485 R 471473 CDS YP_001653653.1 166155398 5859062 complement(667901..668884) 1 NC_010280.1 transaldolase B 668884 tal 5859062 tal Chlamydia trachomatis L2b/UCH-1/proctitis transaldolase B YP_001653653.1 667901 R 471473 CDS YP_001653654.1 166155399 5859218 complement(668996..673186) 1 NC_010280.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 673186 rpoC 5859218 rpoC Chlamydia trachomatis L2b/UCH-1/proctitis DNA-directed RNA polymerase subunit beta' YP_001653654.1 668996 R 471473 CDS YP_001653655.1 166155400 5859657 complement(673211..676969) 1 NC_010280.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 676969 rpoB 5859657 rpoB Chlamydia trachomatis L2b/UCH-1/proctitis DNA-directed RNA polymerase subunit beta YP_001653655.1 673211 R 471473 CDS YP_001653656.1 166155401 5859065 complement(677330..677722) 1 NC_010280.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 677722 rplL 5859065 rplL Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L7/L12 YP_001653656.1 677330 R 471473 CDS YP_001653657.1 166155402 5859514 complement(677754..678272) 1 NC_010280.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 678272 rplJ 5859514 rplJ Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L10 YP_001653657.1 677754 R 471473 CDS YP_001653658.1 166155403 5859665 complement(678294..678992) 1 NC_010280.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 678992 rplA 5859665 rplA Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L1 YP_001653658.1 678294 R 471473 CDS YP_001653659.1 166155404 5859119 complement(679015..679440) 1 NC_010280.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 679440 rplK 5859119 rplK Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L11 YP_001653659.1 679015 R 471473 CDS YP_001653660.1 166155405 5858870 complement(679546..680094) 1 NC_010280.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 680094 nusG 5858870 nusG Chlamydia trachomatis L2b/UCH-1/proctitis transcription antitermination protein NusG YP_001653660.1 679546 R 471473 CDS YP_001653661.1 166155406 5859132 complement(680098..680346) 1 NC_010280.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 680346 secE 5859132 secE Chlamydia trachomatis L2b/UCH-1/proctitis preprotein translocase subunit SecE YP_001653661.1 680098 R 471473 CDS YP_001653662.1 166155407 5859640 complement(680489..681673) 1 NC_010280.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 681673 tufA 5859640 tufA Chlamydia trachomatis L2b/UCH-1/proctitis elongation factor Tu YP_001653662.1 680489 R 471473 CDS YP_001653663.1 166155408 5859662 complement(682021..682242) 1 NC_010280.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 682242 infA 5859662 infA Chlamydia trachomatis L2b/UCH-1/proctitis translation initiation factor IF-1 YP_001653663.1 682021 R 471473 CDS YP_001653664.1 166155409 5859726 682653..683564 1 NC_010280.1 hypothetical protein 683564 5859726 CTLon_0572 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653664.1 682653 D 471473 CDS YP_001653665.1 166155410 5859061 683561..684007 1 NC_010280.1 hypothetical protein 684007 5859061 CTLon_0573 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653665.1 683561 D 471473 CDS YP_001653666.1 166155411 5859058 complement(686220..686402) 1 NC_010280.1 hypothetical protein 686402 5859058 CTLon_0576 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653666.1 686220 R 471473 CDS YP_001653667.1 166155412 5858842 complement(687125..687751) 1 NC_010280.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 687751 trpC 5858842 trpC Chlamydia trachomatis L2b/UCH-1/proctitis N-(5'-phosphoribosyl)anthranilate isomerase YP_001653667.1 687125 R 471473 CDS YP_001653668.1 166155413 5859610 687947..688771 1 NC_010280.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 688771 tpiA 5859610 tpiA Chlamydia trachomatis L2b/UCH-1/proctitis triosephosphate isomerase YP_001653668.1 687947 D 471473 CDS YP_001653669.1 166155414 5859542 688785..690335 1 NC_010280.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 690335 xseA 5859542 xseA Chlamydia trachomatis L2b/UCH-1/proctitis exodeoxyribonuclease VII large subunit YP_001653669.1 688785 D 471473 CDS YP_001653670.1 166155415 5858839 690319..690537 1 NC_010280.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 690537 xseB 5858839 xseB Chlamydia trachomatis L2b/UCH-1/proctitis exodeoxyribonuclease VII small subunit YP_001653670.1 690319 D 471473 CDS YP_001653671.1 166155416 5859515 690544..690816 1 NC_010280.1 hypothetical protein 690816 5859515 CTLon_0581 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653671.1 690544 D 471473 CDS YP_001653672.1 166155417 5859056 690813..692735 1 NC_010280.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 692735 dxs 5859056 dxs Chlamydia trachomatis L2b/UCH-1/proctitis 1-deoxy-D-xylulose-5-phosphate synthase YP_001653672.1 690813 D 471473 CDS YP_001653673.1 166155418 5859426 692832..694289 1 NC_010280.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 694289 pykF 5859426 pykF Chlamydia trachomatis L2b/UCH-1/proctitis pyruvate kinase YP_001653673.1 692832 D 471473 CDS YP_001653674.1 166155419 5858923 694312..699672 1 NC_010280.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 699672 uvrA 5858923 uvrA Chlamydia trachomatis L2b/UCH-1/proctitis excinuclease ABC subunit A YP_001653674.1 694312 D 471473 CDS YP_001653675.1 166155420 5859698 699890..701290 1 NC_010280.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 701290 dnaX 5859698 dnaX Chlamydia trachomatis L2b/UCH-1/proctitis DNA polymerase III subunits gamma and tau YP_001653675.1 699890 D 471473 CDS YP_001653676.1 166155421 5859409 701283..701573 1 NC_010280.1 hypothetical protein 701573 5859409 CTLon_0586 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653676.1 701283 D 471473 CDS YP_001653677.1 166155422 5859055 complement(701583..703298) 1 NC_010280.1 phosphoenolpyruvate-protein phosphotransferase 703298 ptsI 5859055 ptsI Chlamydia trachomatis L2b/UCH-1/proctitis phosphoenolpyruvate-protein phosphotransferase YP_001653677.1 701583 R 471473 CDS YP_001653678.1 166155423 5858913 complement(703298..703627) 1 NC_010280.1 phosphocarrier protein HPr 703627 ptsH 5858913 ptsH Chlamydia trachomatis L2b/UCH-1/proctitis phosphocarrier protein HPr YP_001653678.1 703298 R 471473 CDS YP_001653679.1 166155424 5858899 complement(703765..704226) 1 NC_010280.1 hypothetical protein 704226 5858899 CTLon_0589 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653679.1 703765 R 471473 CDS YP_001653680.1 166155425 5859054 complement(704283..704465) 1 NC_010280.1 hypothetical protein 704465 5859054 CTLon_0590 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653680.1 704283 R 471473 CDS YP_001653681.1 166155426 5859053 704510..706039 1 NC_010280.1 hypothetical protein 706039 5859053 CTLon_0591 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653681.1 704510 D 471473 CDS YP_001653682.1 166155427 5859052 complement(706111..708147) 1 NC_010280.1 2-oxoisovalerate dehydrogenase alpha subunit 708147 5859052 CTLon_0592 Chlamydia trachomatis L2b/UCH-1/proctitis 2-oxoisovalerate dehydrogenase alpha subunit YP_001653682.1 706111 R 471473 CDS YP_001653683.1 166155428 5859051 complement(708182..709360) 1 NC_010280.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 709360 dnaJ 5859051 dnaJ Chlamydia trachomatis L2b/UCH-1/proctitis chaperone protein DnaJ YP_001653683.1 708182 R 471473 CDS YP_001653684.1 166155429 5859397 complement(709389..709565) 1 NC_010280.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 709565 rpsU 5859397 rpsU Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S21 YP_001653684.1 709389 R 471473 CDS YP_001653685.1 166155430 5859253 complement(709763..710395) 1 NC_010280.1 O-sialoglycoprotein endopeptidase 710395 5859253 CTLon_0595 Chlamydia trachomatis L2b/UCH-1/proctitis O-sialoglycoprotein endopeptidase YP_001653685.1 709763 R 471473 CDS YP_001653686.1 166155431 5859050 710705..713164 1 NC_010280.1 ATP-dependent protease La 713164 lon 5859050 lon Chlamydia trachomatis L2b/UCH-1/proctitis ATP-dependent protease La YP_001653686.1 710705 D 471473 CDS YP_001653687.1 166155432 5859636 713266..713631 1 NC_010280.1 hypothetical protein 713631 5859636 CTLon_0597 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653687.1 713266 D 471473 CDS YP_001653688.1 166155433 5859049 713974..714888 1 NC_010280.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 714888 5859049 CTLon_0598 Chlamydia trachomatis L2b/UCH-1/proctitis ribonuclease Z YP_001653688.1 713974 D 471473 CDS YP_001653689.1 166155434 5859048 714950..715897 1 NC_010280.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 715897 xerC 5859048 xerC Chlamydia trachomatis L2b/UCH-1/proctitis site-specific tyrosine recombinase XerC YP_001653689.1 714950 D 471473 CDS YP_001653690.1 166155435 5859716 715951..717540 1 NC_010280.1 ABC transporter, ATP-binding component 717540 5859716 CTLon_0600 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transporter, ATP-binding component YP_001653690.1 715951 D 471473 CDS YP_001653691.1 166155436 5859047 717576..718166 1 NC_010280.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 718166 5859047 CTLon_0601 Chlamydia trachomatis L2b/UCH-1/proctitis Maf-like protein YP_001653691.1 717576 D 471473 CDS YP_001653692.1 166155437 5859046 718148..719848 1 NC_010280.1 putative lipoprotein 719848 5859046 CTLon_0602 Chlamydia trachomatis L2b/UCH-1/proctitis putative lipoprotein YP_001653692.1 718148 D 471473 CDS YP_001653693.1 166155438 5859044 719855..721957 1 NC_010280.1 hypothetical protein 721957 5859044 CTLon_0603 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653693.1 719855 D 471473 CDS YP_001653694.1 166155439 5859043 complement(722031..722339) 1 NC_010280.1 preprotein translocase subunit SecG 722339 secG 5859043 secG Chlamydia trachomatis L2b/UCH-1/proctitis preprotein translocase subunit SecG YP_001653694.1 722031 R 471473 CDS YP_001653695.1 166155440 5858853 complement(722495..723040) 1 NC_010280.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 723040 def 5858853 def Chlamydia trachomatis L2b/UCH-1/proctitis peptide deformylase YP_001653695.1 722495 R 471473 CDS YP_001653696.1 166155441 5859379 complement(723315..724148) 1 NC_010280.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 724148 ksgA 5859379 ksgA Chlamydia trachomatis L2b/UCH-1/proctitis dimethyladenosine transferase YP_001653696.1 723315 R 471473 CDS YP_001653697.1 166155442 5859685 complement(724164..725225) 1 NC_010280.1 hypothetical protein 725225 5859685 CTLon_0607 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653697.1 724164 R 471473 CDS YP_001653698.1 166155443 5859042 complement(725530..727644) 1 NC_010280.1 hypothetical protein 727644 5859042 CTLon_0608 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653698.1 725530 R 471473 CDS YP_001653699.1 166155444 5859604 728101..728433 1 NC_010280.1 carries characteristic twin membrane spanning domains; hypothetical protein 728433 5859604 CTLon_0609 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653699.1 728101 D 471473 CDS YP_001653700.1 166155445 5859039 complement(729053..729643) 1 NC_010280.1 putative inner membrane protein 729643 5859039 CTLon_0611 Chlamydia trachomatis L2b/UCH-1/proctitis putative inner membrane protein YP_001653700.1 729053 R 471473 CDS YP_001653701.1 166155446 5859038 complement(729895..730521) 1 NC_010280.1 hypothetical protein 730521 5859038 CTLon_0612 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653701.1 729895 R 471473 CDS YP_001653702.1 166155447 5859036 complement(730683..731543) 1 NC_010280.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 731543 dapA 5859036 dapA Chlamydia trachomatis L2b/UCH-1/proctitis dihydrodipicolinate synthase YP_001653702.1 730683 R 471473 CDS YP_001653703.1 166155448 5859370 complement(731553..732848) 1 NC_010280.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 732848 lysC 5859370 lysC Chlamydia trachomatis L2b/UCH-1/proctitis aspartate kinase YP_001653703.1 731553 R 471473 CDS YP_001653704.1 166155449 5859575 complement(732841..733845) 1 NC_010280.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase 733845 asd 5859575 asd Chlamydia trachomatis L2b/UCH-1/proctitis aspartate-semialdehyde dehydrogenase YP_001653704.1 732841 R 471473 CDS YP_001653705.1 166155450 5858850 complement(733855..734616) 1 NC_010280.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 734616 dapB 5858850 dapB Chlamydia trachomatis L2b/UCH-1/proctitis dihydrodipicolinate reductase YP_001653705.1 733855 R 471473 CDS YP_001653706.1 166155451 5859374 complement(734793..736520) 1 NC_010280.1 putative integral membrane protein 736520 5859374 CTLon_0617 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653706.1 734793 R 471473 CDS YP_001653707.1 166155452 5859035 736690..738012 1 NC_010280.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 738012 aroA 5859035 aroA Chlamydia trachomatis L2b/UCH-1/proctitis 3-phosphoshikimate 1-carboxyvinyltransferase YP_001653707.1 736690 D 471473 CDS YP_001653708.1 166155453 5858860 737954..738508 1 NC_010280.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 738508 aroL 5858860 aroL Chlamydia trachomatis L2b/UCH-1/proctitis shikimate kinase YP_001653708.1 737954 D 471473 CDS YP_001653709.1 166155454 5858852 738501..739574 1 NC_010280.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 739574 aroC 5858852 aroC Chlamydia trachomatis L2b/UCH-1/proctitis chorismate synthase YP_001653709.1 738501 D 471473 CDS YP_001653710.1 166155455 5858856 739571..740692 1 NC_010280.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 740692 aroB 5858856 aroB Chlamydia trachomatis L2b/UCH-1/proctitis 3-dehydroquinate synthase YP_001653710.1 739571 D 471473 CDS YP_001653711.1 166155456 5858857 740673..742115 1 NC_010280.1 AroDE; bifunctional enzyme; can convert 3-dehydroquinate to 3-dehydroshkimate and then to shikimate; involved in the synthesis of aromatic amino acids and other metabolites; type I 3-DHQase; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein 742115 aroDE 5858857 aroDE Chlamydia trachomatis L2b/UCH-1/proctitis bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein YP_001653711.1 740673 D 471473 CDS YP_001653712.1 166155457 5858855 742157..742942 1 NC_010280.1 hypothetical protein 742942 5858855 CTLon_0623 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653712.1 742157 D 471473 CDS YP_001653713.1 166155458 5859034 743083..744411 1 NC_010280.1 hypothetical protein 744411 5859034 CTLon_0624 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653713.1 743083 D 471473 CDS YP_001653714.1 166155459 5859032 745083..746534 1 NC_010280.1 arginine/ornithine antiporter 746534 5859032 CTLon_0626 Chlamydia trachomatis L2b/UCH-1/proctitis arginine/ornithine antiporter YP_001653714.1 745083 D 471473 CDS YP_001653715.1 166155460 5859031 746706..747764 1 NC_010280.1 putative oxidoreductase 747764 5859031 CTLon_0627 Chlamydia trachomatis L2b/UCH-1/proctitis putative oxidoreductase YP_001653715.1 746706 D 471473 CDS YP_001653716.1 166155461 5859030 complement(747806..748786) 1 NC_010280.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 748786 mdhC 5859030 mdhC Chlamydia trachomatis L2b/UCH-1/proctitis malate dehydrogenase YP_001653716.1 747806 R 471473 CDS YP_001653717.1 166155462 5859564 complement(748976..749116) 1 NC_010280.1 late transcription unit A protein 749116 ltuA 5859564 ltuA Chlamydia trachomatis L2b/UCH-1/proctitis late transcription unit A protein YP_001653717.1 748976 R 471473 CDS YP_001653718.1 166155463 5859578 complement(749231..750808) 1 NC_010280.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 750808 pgi 5859578 pgi Chlamydia trachomatis L2b/UCH-1/proctitis glucose-6-phosphate isomerase YP_001653718.1 749231 R 471473 CDS YP_001653719.1 166155464 5859708 complement(750921..752264) 1 NC_010280.1 putative nucleotide-binding protein 752264 5859708 CTLon_0631 Chlamydia trachomatis L2b/UCH-1/proctitis putative nucleotide-binding protein YP_001653719.1 750921 R 471473 CDS YP_001653720.1 166155465 5859029 complement(752277..753077) 1 NC_010280.1 metal-dependent hydrolase 753077 phnP 5859029 phnP Chlamydia trachomatis L2b/UCH-1/proctitis metal-dependent hydrolase YP_001653720.1 752277 R 471473 CDS YP_001653721.1 166155466 5859746 complement(753106..753879) 1 NC_010280.1 arginine transport substrate-binding protein 753879 artJ 5859746 artJ Chlamydia trachomatis L2b/UCH-1/proctitis arginine transport substrate-binding protein YP_001653721.1 753106 R 471473 CDS YP_001653722.1 166155467 5858851 complement(753948..754784) 1 NC_010280.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 754784 aroG 5858851 aroG Chlamydia trachomatis L2b/UCH-1/proctitis 3-deoxy-7-phosphoheptulonate synthase YP_001653722.1 753948 R 471473 CDS YP_001653723.1 166155468 5858854 complement(754921..755112) 1 NC_010280.1 hypothetical protein 755112 5858854 CTLon_0635 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653723.1 754921 R 471473 CDS YP_001653724.1 166155469 5859028 755295..756026 1 NC_010280.1 hypothetical protein 756026 5859028 CTLon_0636 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653724.1 755295 D 471473 CDS YP_001653725.1 166155470 5859027 complement(756037..757656) 1 NC_010280.1 hypothetical protein 757656 5859027 CTLon_0637 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653725.1 756037 R 471473 CDS YP_001653726.1 166155471 5859026 complement(757671..758006) 1 NC_010280.1 hypothetical protein 758006 5859026 CTLon_0638 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653726.1 757671 R 471473 CDS YP_001653727.1 166155472 5859025 complement(758003..758872) 1 NC_010280.1 hypothetical protein 758872 5859025 CTLon_0639 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653727.1 758003 R 471473 CDS YP_001653728.1 166155473 5859024 759159..761234 1 NC_010280.1 hypothetical protein 761234 5859024 CTLon_0640 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653728.1 759159 D 471473 CDS YP_001653729.1 166155474 5859023 complement(761248..761595) 1 NC_010280.1 hypothetical protein 761595 5859023 CTLon_0641 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653729.1 761248 R 471473 CDS YP_001653730.1 166155475 5859022 761777..763003 1 NC_010280.1 hypothetical protein 763003 5859022 CTLon_0642 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653730.1 761777 D 471473 CDS YP_001653731.1 166155476 5859021 763111..764295 1 NC_010280.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 764295 dapL 5859021 dapL Chlamydia trachomatis L2b/UCH-1/proctitis L,L-diaminopimelate aminotransferase YP_001653731.1 763111 D 471473 CDS YP_001653732.1 166155477 5859376 764303..765310 1 NC_010280.1 ABC transporter substrate-binding component 765310 5859376 CTLon_0644 Chlamydia trachomatis L2b/UCH-1/proctitis ABC transporter substrate-binding component YP_001653732.1 764303 D 471473 CDS YP_001653733.1 166155478 5859020 complement(765319..766449) 1 NC_010280.1 hypothetical protein 766449 5859020 CTLon_0645 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653733.1 765319 R 471473 CDS YP_001653734.1 166155479 5859019 766650..768395 1 NC_010280.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 768395 proS 5859019 proS Chlamydia trachomatis L2b/UCH-1/proctitis prolyl-tRNA synthetase YP_001653734.1 766650 D 471473 CDS YP_001653735.1 166155480 5858873 768464..769642 1 NC_010280.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 769642 hrcA 5858873 hrcA Chlamydia trachomatis L2b/UCH-1/proctitis heat-inducible transcription repressor YP_001653735.1 768464 D 471473 CDS YP_001653736.1 166155481 5859018 769639..770211 1 NC_010280.1 HSP-70 cofactor 770211 grpE 5859018 grpE Chlamydia trachomatis L2b/UCH-1/proctitis HSP-70 cofactor YP_001653736.1 769639 D 471473 CDS YP_001653737.1 166155482 5859684 770237..772219 1 NC_010280.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 772219 dnaK 5859684 dnaK Chlamydia trachomatis L2b/UCH-1/proctitis molecular chaperone DnaK YP_001653737.1 770237 D 471473 CDS YP_001653738.1 166155483 5859401 772512..774596 1 NC_010280.1 exoribonuclease II 774596 vacB 5859401 vacB Chlamydia trachomatis L2b/UCH-1/proctitis exoribonuclease II YP_001653738.1 772512 D 471473 CDS YP_001653739.1 166155484 5859670 774852..775616 1 NC_010280.1 hypothetical protein 775616 5859670 CTLon_0651 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653739.1 774852 D 471473 CDS YP_001653740.1 166155485 5859017 complement(776039..777025) 1 NC_010280.1 carbohydrate isomerase 777025 5859017 CTLon_0652 Chlamydia trachomatis L2b/UCH-1/proctitis carbohydrate isomerase YP_001653740.1 776039 R 471473 CDS YP_001653741.1 166155486 5859016 complement(777057..778223) 1 NC_010280.1 branched-chain alpha-keto acid dehydrogenase subunit E2 778223 sucB 5859016 sucB Chlamydia trachomatis L2b/UCH-1/proctitis branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001653741.1 777057 R 471473 CDS YP_001653742.1 166155487 5858969 complement(778469..779707) 1 NC_010280.1 Sodium:dicarboxylate symport protein 779707 gltT 5858969 gltT Chlamydia trachomatis L2b/UCH-1/proctitis Sodium:dicarboxylate symport protein YP_001653742.1 778469 R 471473 CDS YP_001653743.1 166155488 5859576 complement(779704..780813) 1 NC_010280.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 780813 lpxK 5859576 lpxK Chlamydia trachomatis L2b/UCH-1/proctitis tetraacyldisaccharide 4'-kinase YP_001653743.1 779704 R 471473 CDS YP_001653744.1 166155489 5859014 complement(780979..781788) 1 NC_010280.1 23S rRNA methyltransferase 781788 5859014 CTLon_0656 Chlamydia trachomatis L2b/UCH-1/proctitis 23S rRNA methyltransferase YP_001653744.1 780979 R 471473 CDS YP_001653745.1 166155490 5859013 complement(781776..782603) 1 NC_010280.1 N6-adenine-specific DNA methylase 782603 5859013 CTLon_0657 Chlamydia trachomatis L2b/UCH-1/proctitis N6-adenine-specific DNA methylase YP_001653745.1 781776 R 471473 CDS YP_001653746.1 166155491 5859011 complement(782600..783199) 1 NC_010280.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 783199 ribC 5859011 ribC Chlamydia trachomatis L2b/UCH-1/proctitis riboflavin synthase subunit alpha YP_001653746.1 782600 R 471473 CDS YP_001653747.1 166155492 5859037 783592..784056 1 NC_010280.1 transcriptional regulator NrdR 784056 nrdR 5859037 nrdR Chlamydia trachomatis L2b/UCH-1/proctitis transcriptional regulator NrdR YP_001653747.1 783592 D 471473 CDS YP_001653748.1 166155493 5859009 784070..784444 1 NC_010280.1 dnaK suppressor protein 784444 dksA 5859009 dksA Chlamydia trachomatis L2b/UCH-1/proctitis dnaK suppressor protein YP_001653748.1 784070 D 471473 CDS YP_001653749.1 166155494 5859387 784450..784953 1 NC_010280.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 784953 lspA 5859387 lspA Chlamydia trachomatis L2b/UCH-1/proctitis lipoprotein signal peptidase YP_001653749.1 784450 D 471473 CDS YP_001653750.1 166155495 5859584 785055..786416 1 NC_010280.1 Sodium/alanine symporter protein 786416 5859584 CTLon_0662 Chlamydia trachomatis L2b/UCH-1/proctitis Sodium/alanine symporter protein YP_001653750.1 785055 D 471473 CDS YP_001653751.1 166155496 5859008 786632..787909 1 NC_010280.1 polyA polymerase 787909 pcnB 5859008 pcnB Chlamydia trachomatis L2b/UCH-1/proctitis polyA polymerase YP_001653751.1 786632 D 471473 CDS YP_001653752.1 166155497 5858897 787970..789793 1 NC_010280.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate; lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 789793 lpxB 5858897 lpxB Chlamydia trachomatis L2b/UCH-1/proctitis lipid-A-disaccharide synthase YP_001653752.1 787970 D 471473 CDS YP_001653753.1 166155498 5859597 789900..792827 1 NC_010280.1 polymorphic outer membrane protein 792827 pmpA 5859597 pmpA Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653753.1 789900 D 471473 CDS YP_001653754.1 166155499 5859751 792966..798215 1 NC_010280.1 polymorphic outer membrane protein 798215 pmpB 5859751 pmpB Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653754.1 792966 D 471473 CDS YP_001653755.1 166155500 5859754 798391..803715 1 NC_010280.1 polymorphic outer membrane protein 803715 pmpC 5859754 pmpC Chlamydia trachomatis L2b/UCH-1/proctitis polymorphic outer membrane protein YP_001653755.1 798391 D 471473 CDS YP_001653756.1 166155501 5859658 804268..805098 1 NC_010280.1 metal transporter, metal-binding component 805098 5859658 CTLon_0668 Chlamydia trachomatis L2b/UCH-1/proctitis metal transporter, metal-binding component YP_001653756.1 804268 D 471473 CDS YP_001653757.1 166155502 5859007 805095..805805 1 NC_010280.1 metal transporter, ATP-binding component 805805 5859007 CTLon_0669 Chlamydia trachomatis L2b/UCH-1/proctitis metal transporter, ATP-binding component YP_001653757.1 805095 D 471473 CDS YP_001653758.1 166155503 5859006 805796..806677 1 NC_010280.1 metal transporter, membrane permease component 806677 5859006 CTLon_0670 Chlamydia trachomatis L2b/UCH-1/proctitis metal transporter, membrane permease component YP_001653758.1 805796 D 471473 CDS YP_001653759.1 166155504 5859005 complement(806593..807600) 1 NC_010280.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 807600 obgE 5859005 obgE Chlamydia trachomatis L2b/UCH-1/proctitis GTPase ObgE YP_001653759.1 806593 R 471473 CDS YP_001653760.1 166155505 5859004 complement(807690..807941) 1 NC_010280.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 807941 rpmA 5859004 rpmA Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L27 YP_001653760.1 807690 R 471473 CDS YP_001653761.1 166155506 5859504 complement(807972..808295) 1 NC_010280.1 50S ribosomal protein L21 808295 rplU 5859504 rplU Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L21 YP_001653761.1 807972 R 471473 CDS YP_001653762.1 166155507 5859508 808845..809546 1 NC_010280.1 putative inner membrane protein 809546 5859508 CTLon_0674ae Chlamydia trachomatis L2b/UCH-1/proctitis putative inner membrane protein YP_001653762.1 808845 D 471473 CDS YP_001653763.1 166155508 5859003 809731..809892 1 NC_010280.1 hypothetical protein 809892 5859003 CTLon_0675af Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653763.1 809731 D 471473 CDS YP_001653764.1 166155509 5859002 809909..810070 1 NC_010280.1 hypothetical protein 810070 5859002 CTLon_0676 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653764.1 809909 D 471473 CDS YP_001653765.1 166155510 5859001 810084..810569 1 NC_010280.1 hypothetical protein 810569 5859001 CTLon_0677 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653765.1 810084 D 471473 CDS YP_001653766.1 166155511 5858999 810702..811811 1 NC_010280.1 putative cation efflux protein 811811 5858999 CTLon_0678 Chlamydia trachomatis L2b/UCH-1/proctitis putative cation efflux protein YP_001653766.1 810702 D 471473 CDS YP_001653767.1 166155512 5858998 812000..812350 1 NC_010280.1 anti-sigma F factor antagonist 812350 rsbV 5858998 rsbV Chlamydia trachomatis L2b/UCH-1/proctitis anti-sigma F factor antagonist YP_001653767.1 812000 D 471473 CDS YP_001653768.1 166155513 5859648 812528..814393 1 NC_010280.1 hypothetical protein 814393 5859648 CTLon_0680 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653768.1 812528 D 471473 CDS YP_001653769.1 166155514 5858997 814590..815699 1 NC_010280.1 hypothetical protein 815699 5858997 CTLon_0681 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653769.1 814590 D 471473 CDS YP_001653770.1 166155515 5858996 815672..816493 1 NC_010280.1 hypothetical protein 816493 5858996 CTLon_0682 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653770.1 815672 D 471473 CDS YP_001653771.1 166155516 5858995 816429..817118 1 NC_010280.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 817118 ubiE 5858995 ubiE Chlamydia trachomatis L2b/UCH-1/proctitis ubiquinone/menaquinone biosynthesis methyltransferase YP_001653771.1 816429 D 471473 CDS YP_001653772.1 166155517 5859430 complement(817144..818133) 1 NC_010280.1 hypothetical protein 818133 5859430 CTLon_0684 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653772.1 817144 R 471473 CDS YP_001653773.1 166155518 5858994 complement(818194..819021) 1 NC_010280.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 819021 dapF 5858994 dapF Chlamydia trachomatis L2b/UCH-1/proctitis diaminopimelate epimerase YP_001653773.1 818194 R 471473 CDS YP_001653774.1 166155519 5859378 complement(818990..819568) 1 NC_010280.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 819568 clpP 5859378 clpP Chlamydia trachomatis L2b/UCH-1/proctitis ATP-dependent Clp protease proteolytic subunit YP_001653774.1 818990 R 471473 CDS YP_001653775.1 166155520 5859328 complement(819580..821073) 1 NC_010280.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 821073 glyA 5859328 glyA Chlamydia trachomatis L2b/UCH-1/proctitis serine hydroxymethyltransferase YP_001653775.1 819580 R 471473 CDS YP_001653776.1 166155521 5859579 821437..822108 1 NC_010280.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 822108 hemD 5859579 hemD Chlamydia trachomatis L2b/UCH-1/proctitis uroporphyrinogen-III synthase YP_001653776.1 821437 D 471473 CDS YP_001653777.1 166155522 5858993 822211..822747 1 NC_010280.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 822747 ispF 5858993 ispF Chlamydia trachomatis L2b/UCH-1/proctitis 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001653777.1 822211 D 471473 CDS YP_001653778.1 166155523 5859694 complement(822744..823796) 1 NC_010280.1 putative oxidoreductase 823796 5859694 CTLon_0690 Chlamydia trachomatis L2b/UCH-1/proctitis putative oxidoreductase YP_001653778.1 822744 R 471473 CDS YP_001653779.1 166155524 5858992 complement(823813..824130) 1 NC_010280.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 824130 rpsJ 5858992 rpsJ Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S10 YP_001653779.1 823813 R 471473 CDS YP_001653780.1 166155525 5859063 complement(824138..826222) 1 NC_010280.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 826222 fusA 5859063 fusA Chlamydia trachomatis L2b/UCH-1/proctitis elongation factor G YP_001653780.1 824138 R 471473 CDS YP_001653781.1 166155526 5859535 complement(826264..826737) 1 NC_010280.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 826737 rpsG 5859535 rpsG Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S7 YP_001653781.1 826264 R 471473 CDS YP_001653782.1 166155527 5859516 complement(826787..827176) 1 NC_010280.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 827176 rpsL 5859516 rpsL Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S12 YP_001653782.1 826787 R 471473 CDS YP_001653783.1 166155528 5859441 827418..827756 1 NC_010280.1 hypothetical protein 827756 5859441 CTLon_0695 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653783.1 827418 D 471473 CDS YP_001653784.1 166155529 5858991 827914..829863 1 NC_010280.1 carboxy-terminal processing protease 829863 tsp 5858991 tsp Chlamydia trachomatis L2b/UCH-1/proctitis carboxy-terminal processing protease YP_001653784.1 827914 D 471473 CDS YP_001653785.1 166155530 5859686 complement(829970..830422) 1 NC_010280.1 cysteine-rich membrane protein 830422 crpA 5859686 crpA Chlamydia trachomatis L2b/UCH-1/proctitis cysteine-rich membrane protein YP_001653785.1 829970 R 471473 CDS YP_001653786.1 166155531 5859353 complement(830600..832261) 1 NC_010280.1 60kD cysteine-rich outer membrane protein 832261 omcB 5859353 omcB Chlamydia trachomatis L2b/UCH-1/proctitis 60kD cysteine-rich outer membrane protein YP_001653786.1 830600 R 471473 CDS YP_001653787.1 166155532 5859148 complement(832408..832674) 1 NC_010280.1 cysteine-rich outer membrane protein 832674 omcA 5859148 omcA Chlamydia trachomatis L2b/UCH-1/proctitis cysteine-rich outer membrane protein YP_001653787.1 832408 R 471473 CDS YP_001653788.1 166155533 5859131 833011..833235 1 NC_010280.1 putative lipoprotein 833235 5859131 CTLon_0700 Chlamydia trachomatis L2b/UCH-1/proctitis putative lipoprotein YP_001653788.1 833011 D 471473 CDS YP_001653789.1 166155534 5858990 complement(833232..834752) 1 NC_010280.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 834752 gltX 5858990 gltX Chlamydia trachomatis L2b/UCH-1/proctitis glutamyl-tRNA synthetase YP_001653789.1 833232 R 471473 CDS YP_001653790.1 166155535 5859580 complement(835023..835574) 1 NC_010280.1 hypothetical protein 835574 euo 5859580 euo Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653790.1 835023 R 471473 CDS YP_001653791.1 166155536 5859433 complement(835978..837732) 1 NC_010280.1 single-stranded-DNA-specific exonuclease 837732 recJ 5859433 recJ Chlamydia trachomatis L2b/UCH-1/proctitis single-stranded-DNA-specific exonuclease YP_001653791.1 835978 R 471473 CDS YP_001653792.1 166155537 5859010 complement(837850..842052) 1 NC_010280.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; in these organisms there is an unknown N-terminal domain; bifunctional preprotein translocase subunit SecD/SecF 842052 secF 5859010 secF Chlamydia trachomatis L2b/UCH-1/proctitis bifunctional preprotein translocase subunit SecD/SecF YP_001653792.1 837850 R 471473 CDS YP_001653793.1 166155538 5859639 complement(842472..842804) 1 NC_010280.1 hypothetical protein 842804 5859639 CTLon_0705 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653793.1 842472 R 471473 CDS YP_001653794.1 166155539 5858989 843266..844027 1 NC_010280.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 844027 uppS 5858989 uppS Chlamydia trachomatis L2b/UCH-1/proctitis undecaprenyl pyrophosphate synthase YP_001653794.1 843266 D 471473 CDS YP_001653795.1 166155540 5859613 844033..844950 1 NC_010280.1 phosphatidate cytidylyltransferase 844950 cdsA 5859613 cdsA Chlamydia trachomatis L2b/UCH-1/proctitis phosphatidate cytidylyltransferase YP_001653795.1 844033 D 471473 CDS YP_001653796.1 166155541 5859619 844947..845597 1 NC_010280.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 845597 cmk 5859619 cmk Chlamydia trachomatis L2b/UCH-1/proctitis cytidylate kinase YP_001653796.1 844947 D 471473 CDS YP_001653797.1 166155542 5859332 845594..846244 1 NC_010280.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 846244 plsC 5859332 plsC Chlamydia trachomatis L2b/UCH-1/proctitis 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001653797.1 845594 D 471473 CDS YP_001653798.1 166155543 5859749 846259..847950 1 NC_010280.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 847950 argS 5859749 argS Chlamydia trachomatis L2b/UCH-1/proctitis arginyl-tRNA synthetase YP_001653798.1 846259 D 471473 CDS YP_001653799.1 166155544 5858861 complement(847990..849324) 1 NC_010280.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 849324 murA 5858861 murA Chlamydia trachomatis L2b/UCH-1/proctitis UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001653799.1 847990 R 471473 CDS YP_001653800.1 166155545 5859534 849536..852541 1 NC_010280.1 translocated actin-recruiting protein 852541 tarp 5859534 tarp Chlamydia trachomatis L2b/UCH-1/proctitis translocated actin-recruiting protein YP_001653800.1 849536 D 471473 CDS YP_001653801.1 166155546 5859343 complement(852593..853309) 1 NC_010280.1 hypothetical protein 853309 5859343 CTLon_0713 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653801.1 852593 R 471473 CDS YP_001653802.1 166155547 5858988 complement(853492..853995) 1 NC_010280.1 ribosomal-protein-alanine acetyltransferase 853995 5858988 CTLon_0714 Chlamydia trachomatis L2b/UCH-1/proctitis ribosomal-protein-alanine acetyltransferase YP_001653802.1 853492 R 471473 CDS YP_001653803.1 166155548 5858987 complement(join(853992..855029,855031..855099)) 1 NC_010280.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 855099 prfB 5858987 prfB Chlamydia trachomatis L2b/UCH-1/proctitis peptide chain release factor 2 YP_001653803.1 853992 R 471473 CDS YP_001653804.1 166155549 5858859 855419..855679 1 NC_010280.1 Note the Pfam PF02201;SWIB-MDM2 domain.; hypothetical protein 855679 5858859 CTLon_0716 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653804.1 855419 D 471473 CDS YP_001653805.1 166155550 5858985 855737..856726 1 NC_010280.1 putative metallo-phosphoesterase 856726 5858985 CTLon_0717 Chlamydia trachomatis L2b/UCH-1/proctitis putative metallo-phosphoesterase YP_001653805.1 855737 D 471473 CDS YP_001653806.1 166155551 5858984 856716..857375 1 NC_010280.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 857375 ispD 5858984 ispD Chlamydia trachomatis L2b/UCH-1/proctitis 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001653806.1 856716 D 471473 CDS YP_001653807.1 166155552 5859703 857384..858187 1 NC_010280.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 858187 truA 5859703 truA Chlamydia trachomatis L2b/UCH-1/proctitis tRNA pseudouridine synthase A YP_001653807.1 857384 D 471473 CDS YP_001653808.1 166155553 5859677 complement(858139..858813) 1 NC_010280.1 HAD superfamily hydrolase 858813 5859677 CTLon_0720 Chlamydia trachomatis L2b/UCH-1/proctitis HAD superfamily hydrolase YP_001653808.1 858139 R 471473 CDS YP_001653809.1 166155554 5858983 858906..859547 1 NC_010280.1 hypothetical protein 859547 5858983 CTLon_0721 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653809.1 858906 D 471473 CDS YP_001653810.1 166155555 5859226 859841..860170 1 NC_010280.1 hypothetical protein 860170 5859226 CTLon_0722 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653810.1 859841 D 471473 CDS YP_001653811.1 166155556 5858980 860148..861206 1 NC_010280.1 two component regulator, histidine kinase 861206 atoS 5858980 atoS Chlamydia trachomatis L2b/UCH-1/proctitis two component regulator, histidine kinase YP_001653811.1 860148 D 471473 CDS YP_001653812.1 166155557 5858843 861249..862409 1 NC_010280.1 two component system response regulator 862409 atoC 5858843 atoC Chlamydia trachomatis L2b/UCH-1/proctitis two component system response regulator YP_001653812.1 861249 D 471473 CDS YP_001653813.1 166155558 5859556 862636..863172 1 NC_010280.1 hypothetical protein 863172 5859556 CTLon_0725 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653813.1 862636 D 471473 CDS YP_001653814.1 166155559 5858979 863142..863873 1 NC_010280.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 863873 recO 5858979 recO Chlamydia trachomatis L2b/UCH-1/proctitis DNA repair protein RecO YP_001653814.1 863142 D 471473 CDS YP_001653815.1 166155560 5859000 complement(863870..864472) 1 NC_010280.1 hypothetical protein 864472 5859000 CTLon_0727 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653815.1 863870 R 471473 CDS YP_001653816.1 166155561 5859577 864950..865744 1 NC_010280.1 hypothetical protein 865744 5859577 CTLon_0728 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653816.1 864950 D 471473 CDS YP_001653817.1 166155562 5858974 865750..866064 1 NC_010280.1 hypothetical protein 866064 5858974 CTLon_0729 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653817.1 865750 D 471473 CDS YP_001653818.1 166155563 5858973 complement(866003..866932) 1 NC_010280.1 hypothetical protein 866932 5858973 CTLon_0730 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653818.1 866003 R 471473 CDS YP_001653819.1 166155564 5858972 867020..869392 1 NC_010280.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 869392 pheT 5858972 pheT Chlamydia trachomatis L2b/UCH-1/proctitis phenylalanyl-tRNA synthetase subunit beta YP_001653819.1 867020 D 471473 CDS YP_001653820.1 166155565 5859743 869389..870354 1 NC_010280.1 hypothetical protein 870354 5859743 CTLon_0732 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653820.1 869389 D 471473 CDS YP_001653821.1 166155566 5858971 870373..870885 1 NC_010280.1 putative DNA methyltransferase 870885 5858971 CTLon_0733 Chlamydia trachomatis L2b/UCH-1/proctitis putative DNA methyltransferase YP_001653821.1 870373 D 471473 CDS YP_001653822.1 166155567 5858970 complement(870882..872618) 1 NC_010280.1 oligonucleotide transport system permease 872618 oppC2 5858970 oppC2 Chlamydia trachomatis L2b/UCH-1/proctitis oligonucleotide transport system permease YP_001653822.1 870882 R 471473 CDS YP_001653823.1 166155568 5858918 complement(872620..874035) 1 NC_010280.1 oligopeptide transport system membrane permease 874035 oppB2 5858918 oppB2 Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system membrane permease YP_001653823.1 872620 R 471473 CDS YP_001653824.1 166155569 5859582 complement(874080..876170) 1 NC_010280.1 oligopeptide transport system, binding protein 876170 oppA4 5859582 oppA4 Chlamydia trachomatis L2b/UCH-1/proctitis oligopeptide transport system, binding protein YP_001653824.1 874080 R 471473 CDS YP_001653825.1 166155570 5859180 complement(876776..877507) 1 NC_010280.1 hypothetical protein 877507 5859180 CTLon_0737 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653825.1 876776 R 471473 CDS YP_001653826.1 166155571 5858968 complement(877669..878322) 1 NC_010280.1 hypothetical protein 878322 5858968 CTLon_0738 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653826.1 877669 R 471473 CDS YP_001653827.1 166155572 5858966 878790..879155 1 NC_010280.1 hypothetical protein 879155 5858966 CTLon_0739 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653827.1 878790 D 471473 CDS YP_001653828.1 166155573 5858965 complement(879134..880132) 1 NC_010280.1 hypothetical protein 880132 5858965 CTLon_0740 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653828.1 879134 R 471473 CDS YP_001653829.1 166155574 5858964 complement(880289..881233) 1 NC_010280.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 881233 hemH 5858964 hemH Chlamydia trachomatis L2b/UCH-1/proctitis ferrochelatase YP_001653829.1 880289 R 471473 CDS YP_001653830.1 166155575 5859739 complement(881255..882040) 1 NC_010280.1 glutamine-binding protein 882040 fliY 5859739 fliY Chlamydia trachomatis L2b/UCH-1/proctitis glutamine-binding protein YP_001653830.1 881255 R 471473 CDS YP_001653831.1 166155576 5859501 complement(882086..882658) 1 NC_010280.1 methyltransferase 882658 5859501 CTLon_0743 Chlamydia trachomatis L2b/UCH-1/proctitis methyltransferase YP_001653831.1 882086 R 471473 CDS YP_001653832.1 166155577 5858963 complement(882655..883389) 1 NC_010280.1 putative phosphohydrolase 883389 5858963 CTLon_0744 Chlamydia trachomatis L2b/UCH-1/proctitis putative phosphohydrolase YP_001653832.1 882655 R 471473 CDS YP_001653833.1 166155578 5858961 complement(883478..884803) 1 NC_010280.1 glucose-1-phosphate adenylyltransferase 884803 glgC 5858961 glgC Chlamydia trachomatis L2b/UCH-1/proctitis glucose-1-phosphate adenylyltransferase YP_001653833.1 883478 R 471473 CDS YP_001653834.1 166155579 5859567 884994..885245 1 NC_010280.1 hypothetical protein 885245 5859567 CTLon_0746 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653834.1 884994 D 471473 CDS YP_001653835.1 166155580 5858960 complement(885255..886649) 1 NC_010280.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 886649 rho 5858960 rho Chlamydia trachomatis L2b/UCH-1/proctitis transcription termination factor Rho YP_001653835.1 885255 R 471473 CDS YP_001653836.1 166155581 5859012 complement(886646..887254) 1 NC_010280.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 887254 coaE 5859012 coaE Chlamydia trachomatis L2b/UCH-1/proctitis dephospho-CoA kinase YP_001653836.1 886646 R 471473 CDS YP_001653837.1 166155582 5858959 complement(887248..889848) 1 NC_010280.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 889848 polA 5858959 polA Chlamydia trachomatis L2b/UCH-1/proctitis DNA polymerase I YP_001653837.1 887248 R 471473 CDS YP_001653838.1 166155583 5859764 complement(889865..890860) 1 NC_010280.1 exported protease IV 890860 sohB 5859764 sohB Chlamydia trachomatis L2b/UCH-1/proctitis exported protease IV YP_001653838.1 889865 R 471473 CDS YP_001653839.1 166155584 5859759 complement(891000..892622) 1 NC_010280.1 putative nucleotide transport protein 892622 5859759 CTLon_0751 Chlamydia trachomatis L2b/UCH-1/proctitis putative nucleotide transport protein YP_001653839.1 891000 R 471473 CDS YP_001653840.1 166155585 5858958 complement(892834..893340) 1 NC_010280.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 893340 pgsA 5858958 pgsA Chlamydia trachomatis L2b/UCH-1/proctitis CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001653840.1 892834 R 471473 CDS YP_001653841.1 166155586 5859440 complement(893736..893885) 1 NC_010280.1 hypothetical protein 893885 5859440 CTLon_0753 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653841.1 893736 R 471473 CDS YP_001653842.1 166155587 5858957 893854..895272 1 NC_010280.1 unwinds double stranded DNA; replicative DNA helicase 895272 dnaB 5858957 dnaB Chlamydia trachomatis L2b/UCH-1/proctitis replicative DNA helicase YP_001653842.1 893854 D 471473 CDS YP_001653843.1 166155588 5859390 895567..897399 1 NC_010280.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 897399 gidA 5859390 gidA Chlamydia trachomatis L2b/UCH-1/proctitis tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_001653843.1 895567 D 471473 CDS YP_001653844.1 166155589 5859555 897389..898090 1 NC_010280.1 lipoate-protein ligase A 898090 lplA 5859555 lplA Chlamydia trachomatis L2b/UCH-1/proctitis lipoate-protein ligase A YP_001653844.1 897389 D 471473 CDS YP_001653845.1 166155590 5859606 complement(898147..898572) 1 NC_010280.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 898572 ndk 5859606 ndk Chlamydia trachomatis L2b/UCH-1/proctitis nucleoside diphosphate kinase YP_001653845.1 898147 R 471473 CDS YP_001653846.1 166155591 5859497 complement(898732..899334) 1 NC_010280.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 899334 ruvA 5859497 ruvA Chlamydia trachomatis L2b/UCH-1/proctitis Holliday junction DNA helicase RuvA YP_001653846.1 898732 R 471473 CDS YP_001653847.1 166155592 5859646 complement(899354..899866) 1 NC_010280.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 899866 ruvC 5859646 ruvC Chlamydia trachomatis L2b/UCH-1/proctitis Holliday junction resolvase YP_001653847.1 899354 R 471473 CDS YP_001653848.1 166155593 5859769 complement(899974..900423) 1 NC_010280.1 hypothetical protein 900423 5859769 CTLon_0760 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653848.1 899974 R 471473 CDS YP_001653849.1 166155594 5859452 complement(900815..901681) 1 NC_010280.1 hypothetical protein 901681 5859452 CTLon_0761 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653849.1 900815 R 471473 CDS YP_001653850.1 166155595 5858955 complement(901692..902696) 1 NC_010280.1 glyceraldehyde 3-phosphate dehydrogenase 902696 gapA 5858955 gapA Chlamydia trachomatis L2b/UCH-1/proctitis glyceraldehyde 3-phosphate dehydrogenase YP_001653850.1 901692 R 471473 CDS YP_001653851.1 166155596 5859540 complement(902740..903165) 1 NC_010280.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 903165 rplQ 5859540 rplQ Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L17 YP_001653851.1 902740 R 471473 CDS YP_001653852.1 166155597 5859502 complement(903174..904307) 1 NC_010280.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 904307 rpoA 5859502 rpoA Chlamydia trachomatis L2b/UCH-1/proctitis DNA-directed RNA polymerase subunit alpha YP_001653852.1 903174 R 471473 CDS YP_001653853.1 166155598 5859614 complement(904328..904726) 1 NC_010280.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 904726 rpsK 5859614 rpsK Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S11 YP_001653853.1 904328 R 471473 CDS YP_001653854.1 166155599 5859770 complement(904748..905116) 1 NC_010280.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 905116 rpsM 5859770 rpsM Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S13 YP_001653854.1 904748 R 471473 CDS YP_001653855.1 166155600 5859273 complement(905172..906545) 1 NC_010280.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 906545 secY 5859273 secY Chlamydia trachomatis L2b/UCH-1/proctitis preprotein translocase subunit SecY YP_001653855.1 905172 R 471473 CDS YP_001653856.1 166155601 5859628 complement(906568..907002) 1 NC_010280.1 late assembly protein; 50S ribosomal protein L15 907002 rplO 5859628 rplO Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L15 YP_001653856.1 906568 R 471473 CDS YP_001653857.1 166155602 5859084 complement(906995..907492) 1 NC_010280.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 907492 rpsE 5859084 rpsE Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S5 YP_001653857.1 906995 R 471473 CDS YP_001653858.1 166155603 5859080 complement(907507..907878) 1 NC_010280.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 907878 rplR 5859080 rplR Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L18 YP_001653858.1 907507 R 471473 CDS YP_001653859.1 166155604 5859702 complement(907900..908451) 1 NC_010280.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 908451 rplF 5859702 rplF Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L6 YP_001653859.1 907900 R 471473 CDS YP_001653860.1 166155605 5859224 complement(908479..908880) 1 NC_010280.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 908880 rpsH 5859224 rpsH Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S8 YP_001653860.1 908479 R 471473 CDS YP_001653861.1 166155606 5859622 complement(908898..909440) 1 NC_010280.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 909440 rplE 5859622 rplE Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L5 YP_001653861.1 908898 R 471473 CDS YP_001653862.1 166155607 5859711 complement(909442..909777) 1 NC_010280.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 909777 rplX 5859711 rplX Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L24 YP_001653862.1 909442 R 471473 CDS YP_001653863.1 166155608 5859260 complement(909790..910158) 1 NC_010280.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 910158 rplN 5859260 rplN Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L14 YP_001653863.1 909790 R 471473 CDS YP_001653864.1 166155609 5859550 complement(910175..910426) 1 NC_010280.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 910426 rpsQ 5859550 rpsQ Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S17 YP_001653864.1 910175 R 471473 CDS YP_001653865.1 166155610 5859618 complement(910419..910637) 1 NC_010280.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 910637 rpmC 5859618 rpmC Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L29 YP_001653865.1 910419 R 471473 CDS YP_001653866.1 166155611 5859274 complement(910639..911055) 1 NC_010280.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 911055 rplP 5859274 rplP Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L16 YP_001653866.1 910639 R 471473 CDS YP_001653867.1 166155612 5859693 complement(911088..911762) 1 NC_010280.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 911762 rpsC 5859693 rpsC Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S3 YP_001653867.1 911088 R 471473 CDS YP_001653868.1 166155613 5859344 complement(911772..912107) 1 NC_010280.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 912107 rplV 5859344 rplV Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L22 YP_001653868.1 911772 R 471473 CDS YP_001653869.1 166155614 5859617 complement(912126..912392) 1 NC_010280.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 912392 rpsS 5859617 rpsS Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S19 YP_001653869.1 912126 R 471473 CDS YP_001653870.1 166155615 5859172 complement(912398..913252) 1 NC_010280.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 913252 rplB 5859172 rplB Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L2 YP_001653870.1 912398 R 471473 CDS YP_001653871.1 166155616 5859626 complement(913276..913611) 1 NC_010280.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 913611 rplW 5859626 rplW Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L23 YP_001653871.1 913276 R 471473 CDS YP_001653872.1 166155617 5859666 complement(913627..914295) 1 NC_010280.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 914295 rplD 5859666 rplD Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L4 YP_001653872.1 913627 R 471473 CDS YP_001653873.1 166155618 5859232 complement(914304..914969) 1 NC_010280.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 914969 rplC 5859232 rplC Chlamydia trachomatis L2b/UCH-1/proctitis 50S ribosomal protein L3 YP_001653873.1 914304 R 471473 CDS YP_001653874.1 166155619 5859616 complement(915404..916300) 1 NC_010280.1 hypothetical protein 916300 5859616 CTLon_0786 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653874.1 915404 R 471473 CDS YP_001653875.1 166155620 5858954 complement(916466..917416) 1 NC_010280.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 917416 fmt 5858954 fmt Chlamydia trachomatis L2b/UCH-1/proctitis methionyl-tRNA formyltransferase YP_001653875.1 916466 R 471473 CDS YP_001653876.1 166155621 5859493 complement(917406..918248) 1 NC_010280.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 918248 lpxA 5859493 lpxA Chlamydia trachomatis L2b/UCH-1/proctitis UDP-N-acetylglucosamine acyltransferase YP_001653876.1 917406 R 471473 CDS YP_001653877.1 166155622 5859607 complement(918260..918721) 1 NC_010280.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 918721 fabZ 5859607 fabZ Chlamydia trachomatis L2b/UCH-1/proctitis (3R)-hydroxymyristoyl-ACP dehydratase YP_001653877.1 918260 R 471473 CDS YP_001653878.1 166155623 5859454 complement(918718..919578) 1 NC_010280.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 919578 lpxC 5859454 lpxC Chlamydia trachomatis L2b/UCH-1/proctitis UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001653878.1 918718 R 471473 CDS YP_001653879.1 166155624 5859602 complement(919677..921305) 1 NC_010280.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 921305 lnt 5859602 lnt Chlamydia trachomatis L2b/UCH-1/proctitis apolipoprotein N-acyltransferase YP_001653879.1 919677 R 471473 CDS YP_001653880.1 166155625 5859352 complement(921369..921851) 1 NC_010280.1 acyl-CoA hydrolase 921851 5859352 CTLon_0792 Chlamydia trachomatis L2b/UCH-1/proctitis acyl-CoA hydrolase YP_001653880.1 921369 R 471473 CDS YP_001653881.1 166155626 5858953 complement(921987..922739) 1 NC_010280.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 922739 dnaQ2 5858953 dnaQ2 Chlamydia trachomatis L2b/UCH-1/proctitis DNA polymerase III subunit epsilon YP_001653881.1 921987 R 471473 CDS YP_001653882.1 166155627 5859403 complement(922743..923216) 1 NC_010280.1 putative nucleotide-binding protein 923216 5859403 CTLon_0794 Chlamydia trachomatis L2b/UCH-1/proctitis putative nucleotide-binding protein YP_001653882.1 922743 R 471473 CDS YP_001653883.1 166155628 5858952 complement(923195..923911) 1 NC_010280.1 hypothetical protein 923911 5858952 CTLon_0795 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653883.1 923195 R 471473 CDS YP_001653884.1 166155629 5859601 924633..924941 1 NC_010280.1 thioredoxin 924941 trxA 5859601 trxA Chlamydia trachomatis L2b/UCH-1/proctitis thioredoxin YP_001653884.1 924633 D 471473 CDS YP_001653885.1 166155630 5859681 complement(924991..925446) 1 NC_010280.1 SpoU family rRNA methylase 925446 5859681 CTLon_0797 Chlamydia trachomatis L2b/UCH-1/proctitis SpoU family rRNA methylase YP_001653885.1 924991 R 471473 CDS YP_001653886.1 166155631 5858950 complement(925462..926193) 1 NC_010280.1 peptidyl-prolyl cis-trans isomerase 926193 mip 5858950 mip Chlamydia trachomatis L2b/UCH-1/proctitis peptidyl-prolyl cis-trans isomerase YP_001653886.1 925462 R 471473 CDS YP_001653887.1 166155632 5859545 complement(926330..928078) 1 NC_010280.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 928078 aspS 5859545 aspS Chlamydia trachomatis L2b/UCH-1/proctitis aspartyl-tRNA synthetase YP_001653887.1 926330 R 471473 CDS YP_001653888.1 166155633 5858847 complement(928059..929345) 1 NC_010280.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 929345 hisS 5858847 hisS Chlamydia trachomatis L2b/UCH-1/proctitis histidyl-tRNA synthetase YP_001653888.1 928059 R 471473 CDS YP_001653889.1 166155634 5859663 929781..931151 1 NC_010280.1 putative sugar phosphate permease 931151 uhpC 5859663 uhpC Chlamydia trachomatis L2b/UCH-1/proctitis putative sugar phosphate permease YP_001653889.1 929781 D 471473 CDS YP_001653890.1 166155635 5859512 931165..934878 1 NC_010280.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 934878 dnaE 5859512 dnaE Chlamydia trachomatis L2b/UCH-1/proctitis DNA polymerase III subunit alpha YP_001653890.1 931165 D 471473 CDS YP_001653891.1 166155636 5859394 complement(935107..935976) 1 NC_010280.1 hypothetical protein 935976 5859394 CTLon_0803 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653891.1 935107 R 471473 CDS YP_001653892.1 166155637 5858949 936128..937084 1 NC_010280.1 note the tetratricopeptide repeat motifs; hypothetical protein 937084 5858949 CTLon_0804 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653892.1 936128 D 471473 CDS YP_001653893.1 166155638 5858947 937109..937693 1 NC_010280.1 hypothetical protein 937693 5858947 CTLon_0805 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653893.1 937109 D 471473 CDS YP_001653894.1 166155639 5858946 937680..938120 1 NC_010280.1 sigma regulatory factor-histidine kinase 938120 rsbW 5858946 rsbW Chlamydia trachomatis L2b/UCH-1/proctitis sigma regulatory factor-histidine kinase YP_001653894.1 937680 D 471473 CDS YP_001653895.1 166155640 5859673 complement(938127..938552) 1 NC_010280.1 hypothetical protein 938552 5859673 CTLon_0807 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653895.1 938127 R 471473 CDS YP_001653896.1 166155641 5858945 938660..939973 1 NC_010280.1 pseudo in SeroD intact in Sero A; D-alanyl-D-alanine carboxypeptidase 939973 dacC 5858945 dacC Chlamydia trachomatis L2b/UCH-1/proctitis D-alanyl-D-alanine carboxypeptidase YP_001653896.1 938660 D 471473 CDS YP_001653897.1 166155642 5859368 940106..940513 1 NC_010280.1 hypothetical protein 940513 5859368 CTLon_0809 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653897.1 940106 D 471473 CDS YP_001653898.1 166155643 5858944 940510..941616 1 NC_010280.1 putative methyltransferase 941616 5858944 CTLon_0810 Chlamydia trachomatis L2b/UCH-1/proctitis putative methyltransferase YP_001653898.1 940510 D 471473 CDS YP_001653899.1 166155644 5858943 941766..943001 1 NC_010280.1 branched-chain amino acid transport system carrier protein 943001 brnQ 5858943 brnQ Chlamydia trachomatis L2b/UCH-1/proctitis branched-chain amino acid transport system carrier protein YP_001653899.1 941766 D 471473 CDS YP_001653900.1 166155645 5859609 943175..946774 1 NC_010280.1 helicase 946774 5859609 CTLon_0812 Chlamydia trachomatis L2b/UCH-1/proctitis helicase YP_001653900.1 943175 D 471473 CDS YP_001653901.1 166155646 5858941 946953..947432 1 NC_010280.1 hypothetical protein 947432 5858941 CTLon_0813 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653901.1 946953 D 471473 CDS YP_001653902.1 166155647 5858940 947641..949038 1 NC_010280.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 949038 lpdA 5858940 lpdA Chlamydia trachomatis L2b/UCH-1/proctitis dihydrolipoamide dehydrogenase YP_001653902.1 947641 D 471473 CDS YP_001653903.1 166155648 5859623 949035..949970 1 NC_010280.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 949970 lipA 5859623 lipA Chlamydia trachomatis L2b/UCH-1/proctitis lipoyl synthase YP_001653903.1 949035 D 471473 CDS YP_001653904.1 166155649 5859634 950074..951051 1 NC_010280.1 type III secretion system protein, membrane component 951051 sctJ 5859634 sctJ Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system protein, membrane component YP_001653904.1 950074 D 471473 CDS YP_001653905.1 166155650 5859668 951052..951888 1 NC_010280.1 hypothetical protein 951888 5859668 CTLon_0817 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653905.1 951052 D 471473 CDS YP_001653906.1 166155651 5858938 952164..952835 1 NC_010280.1 type III secretion system protein 952835 sctL 5858938 sctL Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system protein YP_001653906.1 952164 D 471473 CDS YP_001653907.1 166155652 5859275 952848..953768 1 NC_010280.1 type III secretion system protein 953768 sctR 5859275 sctR Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system protein YP_001653907.1 952848 D 471473 CDS YP_001653908.1 166155653 5859652 953780..954064 1 NC_010280.1 type III secretion system, membrane protein 954064 sctS 5859652 sctS Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system, membrane protein YP_001653908.1 953780 D 471473 CDS YP_001653909.1 166155654 5859624 954071..954940 1 NC_010280.1 type III secretion system, membrane protein 954940 sctT 5859624 sctT Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion system, membrane protein YP_001653909.1 954071 D 471473 CDS YP_001653910.1 166155655 5859659 complement(955019..955462) 1 NC_010280.1 hypothetical protein 955462 5859659 CTLon_0822 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653910.1 955019 R 471473 CDS YP_001653911.1 166155656 5858937 complement(955552..956544) 1 NC_010280.1 hypothetical protein 956544 5858937 CTLon_0823 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653911.1 955552 R 471473 CDS YP_001653912.1 166155657 5858936 complement(956550..957074) 1 NC_010280.1 hypothetical protein 957074 5858936 CTLon_0824 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653912.1 956550 R 471473 CDS YP_001653913.1 166155658 5858935 complement(957059..957514) 1 NC_010280.1 hypothetical protein 957514 5858935 CTLon_0825 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653913.1 957059 R 471473 CDS YP_001653914.1 166155659 5858933 complement(957498..957827) 1 NC_010280.1 general secretion pathway protein G 957827 gspG 5858933 gspG Chlamydia trachomatis L2b/UCH-1/proctitis general secretion pathway protein G YP_001653914.1 957498 R 471473 CDS YP_001653915.1 166155660 5859696 complement(957890..959065) 1 NC_010280.1 general secretion pathway protein F 959065 gspF 5859696 gspF Chlamydia trachomatis L2b/UCH-1/proctitis general secretion pathway protein F YP_001653915.1 957890 R 471473 CDS YP_001653916.1 166155661 5859692 complement(959077..960582) 1 NC_010280.1 general secretion pathway protein E 960582 gspE 5859692 gspE Chlamydia trachomatis L2b/UCH-1/proctitis general secretion pathway protein E YP_001653916.1 959077 R 471473 CDS YP_001653917.1 166155662 5859687 complement(960566..962848) 1 NC_010280.1 general secretion pathway protein D 962848 gspD 5859687 gspD Chlamydia trachomatis L2b/UCH-1/proctitis general secretion pathway protein D YP_001653917.1 960566 R 471473 CDS YP_001653918.1 166155663 5859689 complement(962849..964078) 1 NC_010280.1 hypothetical protein 964078 5859689 CTLon_0830 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653918.1 962849 R 471473 CDS YP_001653919.1 166155664 5858932 complement(964207..965277) 1 NC_010280.1 proline dipeptidase 965277 pepP 5858932 pepP Chlamydia trachomatis L2b/UCH-1/proctitis proline dipeptidase YP_001653919.1 964207 R 471473 CDS YP_001653920.1 166155665 5859492 complement(965288..967018) 1 NC_010280.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 967018 mutL 5859492 mutL Chlamydia trachomatis L2b/UCH-1/proctitis DNA mismatch repair protein YP_001653920.1 965288 R 471473 CDS YP_001653921.1 166155666 5859513 967298..967996 1 NC_010280.1 type III secretion chaperone (low calcium response protein H) 967996 scc2 5859513 scc2 Chlamydia trachomatis L2b/UCH-1/proctitis type III secretion chaperone (low calcium response protein H) YP_001653921.1 967298 D 471473 CDS YP_001653922.1 166155667 5858888 968013..968372 1 NC_010280.1 hypothetical protein 968372 5858888 CTLon_0834 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653922.1 968013 D 471473 CDS YP_001653923.1 166155668 5858931 968409..969872 1 NC_010280.1 putative type III secretion system membrane protein 969872 copB 5858931 copB Chlamydia trachomatis L2b/UCH-1/proctitis putative type III secretion system membrane protein YP_001653923.1 968409 D 471473 CDS YP_001653924.1 166155669 5859330 969903..971222 1 NC_010280.1 putative type III secretion system protein 971222 copD 5859330 copD Chlamydia trachomatis L2b/UCH-1/proctitis putative type III secretion system protein YP_001653924.1 969903 D 471473 CDS YP_001653925.1 166155670 5859335 complement(971300..972283) 1 NC_010280.1 putative integral membrane protein 972283 5859335 CTLon_0837 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653925.1 971300 R 471473 CDS YP_001653926.1 166155671 5858930 972588..974495 1 NC_010280.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 974495 thrS 5858930 thrS Chlamydia trachomatis L2b/UCH-1/proctitis threonyl-tRNA synthetase YP_001653926.1 972588 D 471473 CDS YP_001653927.1 166155672 5858902 974947..975714 1 NC_010280.1 ParA family chromosome partitioning ATPase 975714 minD 5858902 minD Chlamydia trachomatis L2b/UCH-1/proctitis ParA family chromosome partitioning ATPase YP_001653927.1 974947 D 471473 CDS YP_001653928.1 166155673 5859544 975719..976510 1 NC_010280.1 virulence plasmid protein pGP6-D-related protein 976510 gp6D 5859544 gp6D Chlamydia trachomatis L2b/UCH-1/proctitis virulence plasmid protein pGP6-D-related protein YP_001653928.1 975719 D 471473 CDS YP_001653929.1 166155674 5859631 976476..977027 1 NC_010280.1 hypothetical protein 977027 5859631 CTLon_0841 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653929.1 976476 D 471473 CDS YP_001653930.1 166155675 5858929 977206..978246 1 NC_010280.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 978246 trpS 5858929 trpS Chlamydia trachomatis L2b/UCH-1/proctitis tryptophanyl-tRNA synthetase YP_001653930.1 977206 D 471473 CDS YP_001653931.1 166155676 5859644 978271..980277 1 NC_010280.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 980277 uvrB 5859644 uvrB Chlamydia trachomatis L2b/UCH-1/proctitis excinuclease ABC subunit B YP_001653931.1 978271 D 471473 CDS YP_001653932.1 166155677 5859706 980439..981713 1 NC_010280.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 981713 eno 5859706 eno Chlamydia trachomatis L2b/UCH-1/proctitis phosphopyruvate hydratase YP_001653932.1 980439 D 471473 CDS YP_001653933.1 166155678 5859434 981840..983792 1 NC_010280.1 sigma regulatory family protein-PP2C phosphatase 983792 rbsU 5859434 rbsU Chlamydia trachomatis L2b/UCH-1/proctitis sigma regulatory family protein-PP2C phosphatase YP_001653933.1 981840 D 471473 CDS YP_001653934.1 166155679 5858939 983917..985725 1 NC_010280.1 hypothetical protein 985725 5858939 CTLon_0846 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653934.1 983917 D 471473 CDS YP_001653935.1 166155680 5858928 complement(985740..988604) 1 NC_010280.1 hypothetical protein 988604 5858928 CTLon_0847 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653935.1 985740 R 471473 CDS YP_001653936.1 166155681 5858926 complement(988701..989399) 1 NC_010280.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 989399 sdhB 5858926 sdhB Chlamydia trachomatis L2b/UCH-1/proctitis succinate dehydrogenase iron-sulfur subunit YP_001653936.1 988701 R 471473 CDS YP_001653937.1 166155682 5859612 complement(989478..991358) 1 NC_010280.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 991358 sdhA 5859612 sdhA Chlamydia trachomatis L2b/UCH-1/proctitis succinate dehydrogenase flavoprotein subunit YP_001653937.1 989478 R 471473 CDS YP_001653938.1 166155683 5858925 complement(992363..993154) 1 NC_010280.1 putative hydrolase 993154 5858925 CTLon_0851 Chlamydia trachomatis L2b/UCH-1/proctitis putative hydrolase YP_001653938.1 992363 R 471473 CDS YP_001653939.1 166155684 5858922 complement(993239..995317) 1 NC_010280.1 thiol:disulfide interchange protein 995317 dsdD 5858922 dsdD Chlamydia trachomatis L2b/UCH-1/proctitis thiol:disulfide interchange protein YP_001653939.1 993239 R 471473 CDS YP_001653940.1 166155685 5859419 995470..996168 1 NC_010280.1 macromolecule transporter 996168 exbB 5859419 exbB Chlamydia trachomatis L2b/UCH-1/proctitis macromolecule transporter YP_001653940.1 995470 D 471473 CDS YP_001653941.1 166155686 5859437 996165..996572 1 NC_010280.1 macromolecule transport protein 996572 5859437 CTLon_0854 Chlamydia trachomatis L2b/UCH-1/proctitis macromolecule transport protein YP_001653941.1 996165 D 471473 CDS YP_001653942.1 166155687 5858921 996575..997282 1 NC_010280.1 histone H1-I 997282 5858921 CTLon_0855 Chlamydia trachomatis L2b/UCH-1/proctitis histone H1-I YP_001653942.1 996575 D 471473 CDS YP_001653943.1 166155688 5858920 997282..998577 1 NC_010280.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 998577 tolB 5858920 tolB Chlamydia trachomatis L2b/UCH-1/proctitis translocation protein TolB YP_001653943.1 997282 D 471473 CDS YP_001653944.1 166155689 5859669 998574..999140 1 NC_010280.1 peptidoglycan-associated lipoprotein 999140 pal 5859669 pal Chlamydia trachomatis L2b/UCH-1/proctitis peptidoglycan-associated lipoprotein YP_001653944.1 998574 D 471473 CDS YP_001653945.1 166155690 5858924 999130..999732 1 NC_010280.1 putative soluble transglycosylase 999732 5858924 CTLon_0858 Chlamydia trachomatis L2b/UCH-1/proctitis putative soluble transglycosylase YP_001653945.1 999130 D 471473 CDS YP_001653946.1 166155691 5858919 999803..1000195 1 NC_010280.1 hypothetical protein 1000195 5858919 CTLon_0859 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653946.1 999803 D 471473 CDS YP_001653947.1 166155692 5858917 complement(1000192..1000779) 1 NC_010280.1 thioredoxin peroxidase 1000779 ahpC 5858917 ahpC Chlamydia trachomatis L2b/UCH-1/proctitis thioredoxin peroxidase YP_001653947.1 1000192 R 471473 CDS YP_001653948.1 166155693 5859635 complement(1000987..1002588) 1 NC_010280.1 60 kDa chaperonin GroEL2 1002588 groEL2 5859635 groEL2 Chlamydia trachomatis L2b/UCH-1/proctitis 60 kDa chaperonin GroEL2 YP_001653948.1 1000987 R 471473 CDS YP_001653949.1 166155694 5859675 complement(1002668..1003894) 1 NC_010280.1 hypothetical protein 1003894 5859675 CTLon_0862 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653949.1 1002668 R 471473 CDS YP_001653950.1 166155695 5858912 1004091..1004720 1 NC_010280.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 1004720 5858912 CTLon_0863 Chlamydia trachomatis L2b/UCH-1/proctitis putative deoxyribonucleotide triphosphate pyrophosphatase YP_001653950.1 1004091 D 471473 CDS YP_001653951.1 166155696 5858909 complement(1004694..1004933) 1 NC_010280.1 hypothetical protein 1004933 5858909 CTLon_0864 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653951.1 1004694 R 471473 CDS YP_001653952.1 166155697 5858907 complement(1004918..1005607) 1 NC_010280.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1005607 ung 5858907 ung Chlamydia trachomatis L2b/UCH-1/proctitis uracil-DNA glycosylase YP_001653952.1 1004918 R 471473 CDS YP_001653953.1 166155698 5859428 1005688..1007592 1 NC_010280.1 DNA helicase 1007592 uvrD 5859428 uvrD Chlamydia trachomatis L2b/UCH-1/proctitis DNA helicase YP_001653953.1 1005688 D 471473 CDS YP_001653954.1 166155699 5859183 1007596..1008906 1 NC_010280.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 1008906 rpoN 5859183 rpoN Chlamydia trachomatis L2b/UCH-1/proctitis RNA polymerase factor sigma-54 YP_001653954.1 1007596 D 471473 CDS YP_001653955.1 166155700 5859064 complement(1009014..1009709) 1 NC_010280.1 hypothetical protein 1009709 5859064 CTLon_0868 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653955.1 1009014 R 471473 CDS YP_001653956.1 166155701 5858906 complement(1009706..1010437) 1 NC_010280.1 hypothetical protein 1010437 5858906 CTLon_0869 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653956.1 1009706 R 471473 CDS YP_001653957.1 166155702 5858905 complement(1010409..1010888) 1 NC_010280.1 dihydrofolate reductase 1010888 folA 5858905 folA Chlamydia trachomatis L2b/UCH-1/proctitis dihydrofolate reductase YP_001653957.1 1010409 R 471473 CDS YP_001653958.1 166155703 5859506 complement(1010885..1012237) 1 NC_010280.1 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase 1012237 folP 5859506 folP Chlamydia trachomatis L2b/UCH-1/proctitis 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase YP_001653958.1 1010885 R 471473 CDS YP_001653959.1 166155704 5859522 complement(1012234..1012608) 1 NC_010280.1 dihydroneopterin aldolase 1012608 folX 5859522 folX Chlamydia trachomatis L2b/UCH-1/proctitis dihydroneopterin aldolase YP_001653959.1 1012234 R 471473 CDS YP_001653960.1 166155705 5859520 complement(1012627..1014342) 1 NC_010280.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor 1014342 rpoD 5859520 rpoD Chlamydia trachomatis L2b/UCH-1/proctitis RNA polymerase sigma factor YP_001653960.1 1012627 R 471473 CDS YP_001653961.1 166155706 5859125 complement(1014491..1015780) 1 NC_010280.1 putative integral membrane protein 1015780 5859125 CTLon_0874 Chlamydia trachomatis L2b/UCH-1/proctitis putative integral membrane protein YP_001653961.1 1014491 R 471473 CDS YP_001653962.1 166155707 5858904 1016229..1016525 1 NC_010280.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1016525 rpsT 5858904 rpsT Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S20 YP_001653962.1 1016229 D 471473 CDS YP_001653963.1 166155708 5859589 1016758..1017558 1 NC_010280.1 hypothetical protein 1017558 5859589 CTLon_0876 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653963.1 1016758 D 471473 CDS YP_001653964.1 166155709 5858903 complement(1017615..1020242) 1 NC_010280.1 hypothetical protein 1020242 5858903 CTLon_0877 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653964.1 1017615 R 471473 CDS YP_001653965.1 166155710 5858901 1020357..1022873 1 NC_010280.1 hypothetical protein 1022873 5858901 CTLon_0878 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653965.1 1020357 D 471473 CDS YP_001653966.1 166155711 5858900 complement(1022937..1025435) 1 NC_010280.1 hypothetical protein 1025435 5858900 CTLon_0879 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653966.1 1022937 R 471473 CDS YP_001653967.1 166155712 5858898 complement(1025663..1027618) 1 NC_010280.1 member of the CHLPN 76 kD protein family of proteins; hypothetical protein 1027618 5858898 CTLon_0880 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653967.1 1025663 R 471473 CDS YP_001653968.1 166155713 5858896 complement(1027725..1029026) 1 NC_010280.1 member of the CHLPN 76 kD protein family of proteins; hypothetical protein 1029026 5858896 CTLon_0881 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653968.1 1027725 R 471473 CDS YP_001653969.1 166155714 5858895 complement(1029270..1030853) 1 NC_010280.1 putative virulence protein 1030853 mviN 5858895 mviN Chlamydia trachomatis L2b/UCH-1/proctitis putative virulence protein YP_001653969.1 1029270 R 471473 CDS YP_001653970.1 166155715 5859510 1031053..1031919 1 NC_010280.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1031919 nfo 5859510 nfo Chlamydia trachomatis L2b/UCH-1/proctitis endonuclease IV YP_001653970.1 1031053 D 471473 CDS YP_001653971.1 166155716 5859503 complement(1032015..1032644) 1 NC_010280.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1032644 rpsD 5859503 rpsD Chlamydia trachomatis L2b/UCH-1/proctitis 30S ribosomal protein S4 YP_001653971.1 1032015 R 471473 CDS YP_001653972.1 166155717 5859627 1033028..1034011 1 NC_010280.1 hypothetical protein 1034011 5859627 CTLon_0885 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653972.1 1033028 D 471473 CDS YP_001653973.1 166155718 5858894 complement(1034084..1034959) 1 NC_010280.1 dimethylallyltransferase 1034959 ispA 5858894 ispA Chlamydia trachomatis L2b/UCH-1/proctitis dimethylallyltransferase YP_001653973.1 1034084 R 471473 CDS YP_001653974.1 166155719 5859718 complement(1035015..1035632) 1 NC_010280.1 glucosamine-1-phosphate acetyltransferase 1035632 glmU 5859718 glmU Chlamydia trachomatis L2b/UCH-1/proctitis glucosamine-1-phosphate acetyltransferase YP_001653974.1 1035015 R 471473 CDS YP_001653975.1 166155720 5859570 complement(1035685..1036368) 1 NC_010280.1 transcriptional regulatory protein 1036368 5859570 CTLon_0888 Chlamydia trachomatis L2b/UCH-1/proctitis transcriptional regulatory protein YP_001653975.1 1035685 R 471473 CDS YP_001653976.1 166155721 5858893 1036548..1036802 1 NC_010280.1 hypothetical protein 1036802 5858893 CTLon_0889 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653976.1 1036548 D 471473 CDS YP_001653977.1 166155722 5859235 complement(1036983..1038572) 1 NC_010280.1 hypothetical protein 1038572 5859235 CTLon_0890 Chlamydia trachomatis L2b/UCH-1/proctitis hypothetical protein YP_001653977.1 1036983 R 471473 CDS