-- dump date 20140619_031008 -- class Genbank::CDS -- table cds_note -- id note YP_003119711.1 KEGG: bsu:BSU00010 chromosomal replication initiation protein; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_003119712.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rme:Rmet_1648 sigma-24 (FecI-like) YP_003119713.1 PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor YP_003119714.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003119715.1 PFAM: RagB/SusD domain protein YP_003119716.1 PFAM: alkaline phosphatase; SMART: alkaline phosphatase; KEGG: bat:BAS4244 alkaline phosphatase YP_003119717.1 KEGG: bpl:BURPS1106A_0120 hypothetical protein YP_003119718.1 KEGG: bur:Bcep18194_A4796 hypothetical protein YP_003119719.1 KEGG: glo:Glov_0004 DNA gyrase, B subunit YP_003119720.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: swd:Swoo_3747 two component LuxR family transcriptional regulator YP_003119721.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: vvu:VV1_2240 sensor histidine kinase YP_003119722.1 KEGG: Hypothetical protein CBG11609 YP_003119724.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: hch:HCH_03616 hypothetical protein YP_003119725.1 KEGG: sfr:Sfri_4012 hypothetical protein YP_003119726.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: gsu:GSU0716 hypothetical protein YP_003119727.1 PFAM: peptidase M28; KEGG: pat:Patl_2954 peptidase M28 YP_003119728.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gur:Gura_4039 helix-turn-helix domain- containing protein YP_003119730.1 KEGG: mxa:MXAN_3914 PepSY-associated TM helix domain protein YP_003119731.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bac:BamMC406_5929 two component AraC family transcriptional regulator YP_003119732.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003119735.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003119737.1 KEGG: sde:Sde_0211 hypothetical protein YP_003119738.1 KEGG: hypothetical protein YP_003119739.1 KEGG: hypothetical protein YP_003119740.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gbm:Gbem_3412 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003119741.1 KEGG: aba:Acid345_0991 hypothetical protein YP_003119743.1 KEGG: zgc:162180 YP_003119744.1 PFAM: transposase IS3/IS911 family protein; KEGG: lpn:lpg2565 transposase ORF-A, IS-type YP_003119745.1 PFAM: integrase catalytic region; KEGG: oan:Oant_0706 integrase catalytic region YP_003119746.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: shn:Shewana3_1251 IstB ATP binding domain- containing protein YP_003119748.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003119749.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003119750.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003119751.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bbt:BBta_3011 RNA polymerase sigma factor YP_003119752.1 PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR YP_003119753.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sde:Sde_1442 sigma-24 (FecI-like) YP_003119755.1 KEGG: cvi:CV_2753 disulphide-isomerase YP_003119756.1 KEGG: cbs:COXBURSA331_A2031 hypothetical protein YP_003119761.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003119763.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003119764.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003119765.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily YP_003119766.1 PFAM: FecR protein; KEGG: pen:PSEEN0275 FecR-like transmembrane sensor YP_003119767.1 KEGG: bpy:Bphyt_0079 transcriptional regulator, AraC family YP_003119768.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003119770.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_2513 transcriptional regulator, AraC family YP_003119771.1 KEGG: aba:Acid345_0991 hypothetical protein YP_003119773.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: sat:SYN_01929 ATP-dependent RNA helicase YP_003119774.1 PFAM: protein of unknown function DUF1345; KEGG: msl:Msil_0817 protein of unknown function DUF1345 YP_003119775.1 SMART: HTTM domain protein; KEGG: scl:sce8450 hypothetical protein YP_003119776.1 KEGG: scl:sce8449 hypothetical protein YP_003119780.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_7192 hydrolase, NUDIX family YP_003119781.1 PFAM: conserved hypothetical protein; KEGG: efe:EFER_3009 hypothetical protein YP_003119782.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: cvi:CV_2425 hypothetical protein YP_003119783.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: hch:HCH_07000 ADP-ribosylglycohydrolase YP_003119784.1 PFAM: metallophosphoesterase; KEGG: dol:Dole_0345 metallophosphoesterase YP_003119786.1 KEGG: bha:BH0494 exopolygalacturonate lyase; TIGRFAM: cell wall/surface repeat protein; PFAM: carbohydrate-binding protein YP_003119787.1 PFAM: hypothetical protein YP_003119788.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cak:Caul_1379 L-amino-acid oxidase YP_003119789.1 PFAM: aminotransferase class I and II; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: amc:MADE_01039 histidinol-phosphate aminotransferase YP_003119790.1 SMART: Hedgehog/intein hint domain protein; KEGG: shha; sonic hedgehog a; K06224 hedgehog YP_003119791.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: gsu:GSU2860 elongation factor G YP_003119792.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bcm:Bcenmc03_6416 short-chain dehydrogenase/reductase SDR YP_003119793.1 KEGG: sus:Acid_4530 hypothetical protein YP_003119795.1 KEGG: mxa:MXAN_7234 hypothetical protein YP_003119796.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_6519 hypothetical protein YP_003119797.1 KEGG: mxa:MXAN_6539 extracellular protease domain protein YP_003119799.1 KEGG: ccr:CC_0554 hypothetical protein YP_003119800.1 KEGG: mxa:MXAN_3891 group II decarboxylase family protein YP_003119801.1 KEGG: hypothetical protein YP_003119803.1 PFAM: protein of unknown function DUF1349; KEGG: hypothetical protein YP_003119804.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: aba:Acid345_1691 two component transcriptional regulator, LuxR family YP_003119805.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_003119806.1 KEGG: sus:Acid_2325 hypothetical protein YP_003119807.1 KEGG: psb:Psyr_1263 ATPas YP_003119809.1 PFAM: SMC domain protein; KEGG: vfi:VF_1128 hypothetical protein YP_003119810.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sus:Acid_4901 glycoside hydrolase family protein YP_003119811.1 PFAM: protein of unknown function DUF1275; KEGG: pna:Pnap_0124 protein of unknown function DUF1275 YP_003119812.1 KEGG: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003119813.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd0395 Bcr/CflA subfamily drug resistance transporter YP_003119815.1 PFAM: phosphoribosylglycinamide synthetase; KEGG: hypothetical protein YP_003119819.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: gur:Gura_1282 GAF sensor protein YP_003119820.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: gur:Gura_1729 signal transduction histidine kinase YP_003119822.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2118 signal transduction histidine kinase YP_003119823.1 PFAM: histidine kinase dimerisation/phosphoacceptor; hypothetical protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: gur:Gura_1729 signal transduction histidine kinase YP_003119824.1 KEGG: bsu:BSU18010 hypothetical protein YP_003119825.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: sml:Smlt2835 TonB-dependent outer membrane protein YP_003119827.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; K03564 peroxiredoxin Q/BCP YP_003119828.1 PFAM: flavin reductase; KEGG: bbt:BBta_7416 hypothetical protein YP_003119829.1 KEGG: cvi:CV_2216 hypothetical protein YP_003119831.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_2442 short-chain dehydrogenase/reductase SDR YP_003119832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: nmu:Nmul_A1378 short-chain dehydrogenase/reductase SDR YP_003119833.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003119837.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003119838.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003119839.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003119840.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003119842.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: bha:BH0263 RNA polymerase sigma factor SigW YP_003119843.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family YP_003119844.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: mpo:Mpop_0712 C4-dicarboxylate transporter/malic acid transport protein YP_003119845.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: hch:HCH_04763 uncharacterized Fe-S protein YP_003119847.1 KEGG: sus:Acid_7882 hypothetical protein YP_003119848.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_0037 short-chain dehydrogenase/reductase SDR YP_003119849.1 PFAM: alpha/beta hydrolase; KEGG: son:SO_4400 proline iminopeptidase YP_003119851.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pin:Ping_2781 glyoxalase/bleomycin resistance protein/dioxygenase YP_003119852.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_3988 short-chain dehydrogenase/reductase SDR YP_003119853.1 KEGG: ccv:CCV52592_0360 lipoprotein YP_003119855.1 TIGRFAM: HipA N-terminal domain protein; KEGG: lpn:lpg2369 HipA (persistence to inhibition of murein or DNA biosynthesis) YP_003119856.1 PFAM: HipA domain protein; KEGG: lpn:lpg2370 hypothetical protein YP_003119858.1 PFAM: fatty acid desaturase; KEGG: hypothetical protein YP_003119859.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: hypothetical protein; K09458 3-oxoacyl- YP_003119860.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bsu:BSU35160 excinuclease ABC subunit A YP_003119863.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01582 acyltransferase YP_003119864.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_1862 ABC transporter related YP_003119865.1 PFAM: alpha-2-macroglobulin; alpha-2- macroglobulin domain protein 2; KEGG: abo:ABO_0898 hypothetical protein YP_003119866.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; Penicillin- binding domain protein; penicillin-binding protein transpeptidase; KEGG: cja:CJA_3382 murein polymerase, , gt51B YP_003119867.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: abm:ABSDF3613 ATPase YP_003119869.1 PFAM: peptidase M13; peptidase M13 neprilysin; KEGG: saz:Sama_2615 endothelin-converting protein 1 YP_003119871.1 PFAM: YHS domain protein; SMART: TRASH domain protein; KEGG: rpc:RPC_3818 heavy metal translocating P-type ATPase YP_003119873.1 KEGG: xcb:XC_1619 Oar protein YP_003119874.1 PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; SMART: regulatory protein AsnC/Lrp family; KEGG: ppg:PputGB1_5248 AsnC family transcriptional regulator YP_003119875.1 TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein; KEGG: sat:SYN_02966 phosphoenolpyruvate synthase YP_003119877.1 KEGG: scl:sce5067 hypothetical protein YP_003119878.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_0272 TonB-dependent receptor YP_003119880.1 PFAM: metallophosphoesterase; KEGG: pen:PSEEN3916 metallo-dependent phosphoesterase YP_003119881.1 PFAM: protein of unknown function DUF47; KEGG: gsu:GSU0388 hypothetical protein YP_003119882.1 PFAM: phosphate transporter; KEGG: dar:Daro_1123 phosphate transporter YP_003119883.1 KEGG: sfu:Sfum_2263 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_003119884.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase YP_003119885.1 PFAM: transketolase central region; transketolase domain protein; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit YP_003119886.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mxa:MXAN_6759 RNA polymerase sigma-E factor YP_003119887.1 KEGG: hypothetical protein YP_003119888.1 KEGG: sfu:Sfum_0590 hypothetical protein YP_003119889.1 KEGG: glo:Glov_0119 hypothetical protein YP_003119890.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_0708 AraC family transcriptional regulator YP_003119891.1 PFAM: beta-lactamase domain protein; KEGG: cak:Caul_5326 beta-lactamase domain- containing protein YP_003119892.1 PFAM: cell cycle protein; KEGG: sat:SYN_00550 rod shape-determining protein YP_003119893.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gme:Gmet_0928 peptidoglycan glycosyltransferase YP_003119894.1 TIGRFAM: rod shape-determining protein MreD YP_003119895.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_003119896.1 functions in MreBCD complex in some organisms YP_003119897.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_003119898.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: shw:Sputw3181_1459 amino acid/peptide transporter YP_003119899.1 TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: afw:Anae109_0264 OPT family oligopeptide transporter YP_003119901.1 PFAM: protein of unknown function DUF1501; KEGG: mpt:Mpe_A1451 hypothetical protein YP_003119902.1 PFAM: Protein of unknown function DUF1800; KEGG: bxe:Bxe_A2305 hypothetical protein YP_003119903.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: gox:GOX0447 molybdopterin biosynthesis MoeA protein YP_003119904.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_003119905.1 KEGG: gox:GOX0444 bifunctional molybdenum cofactor biosynthesis protein (molybdopterin-guanine dinucleotide biosynthesis protein A and MoaD) YP_003119906.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: tcx:Tcr_2015 TonB-dependent receptor YP_003119909.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mxa:MXAN_2564 molybdopterin converting factor, subunits 1/2 YP_003119912.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: bcr:BCAH187_A4855 molybdopterin converting factor, subunit 1 YP_003119913.1 KEGG: sus:Acid_2933 hypothetical protein YP_003119914.1 PFAM: PepSY-associated TM helix domain protein; KEGG: abm:ABSDF0657 bifunctional protein [includes: sulfite reductase [NADPH] flavoprotein alpha- component; iron-uptake factor] YP_003119915.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; rhodanese domain protein; SMART: rhodanese domain protein; KEGG: afw:Anae109_3607 UBA/ThiF-type NAD/FAD binding protein YP_003119916.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A2820 acetyltransferase, GNAT family YP_003119917.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003119918.1 KEGG: aba:Acid345_2524 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003119921.1 KEGG: hypothetical protein YP_003119922.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mmr:Mmar10_1955 methyltransferase type 11 YP_003119923.1 protein associated with Co2+ and Mg2+ efflux YP_003119926.1 PFAM: YceI family protein; KEGG: sun:SUN_1070 hypothetical protein YP_003119928.1 TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-di aminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bcy:Bcer98_0233 UDP-N-acetylmuramoylalanyl-D- glutamyl-2,6-diaminopimelate--D-alanyl- D-alanyl ligase YP_003119929.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gsu:GSU3303 methylmalonyl-CoA epimerase YP_003119930.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aba:Acid345_0484 aminotransferase, class V YP_003119931.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: aba:Acid345_0483 scaffold protein YP_003119932.1 KEGG: mca:MCA1562 ABC transporter, permease protein YP_003119933.1 KEGG: pae:PA4039 hypothetical protein YP_003119934.1 TIGRFAM: alanine racemase; PFAM: alanine racemase; cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sat:SYN_01482 alanine racemase YP_003119935.1 KEGG: dal:Dalk_1769 lipoprotein signal peptidase YP_003119937.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sfr:Sfri_4008 TonB-dependent receptor, plug YP_003119938.1 PFAM: protein of unknown function DUF81; KEGG: mpo:Mpop_4526 protein of unknown function DUF81 YP_003119939.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: pmu:PM0823 fumarate hydratase YP_003119940.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: sus:Acid_6224 short chain enoyl-CoA hydratase YP_003119942.1 PFAM: cobalamin B12-binding domain protein; KEGG: ade:Adeh_1832 methylmalonyl-CoA mutase YP_003119943.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003119944.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: glutamyl-tRNA synthetase family protein; K01885 glutamyl-tRNA synthetase YP_003119945.1 PFAM: polysaccharide deacetylase; KEGG: bcy:Bcer98_2266 sporulation polysaccharide deacetylase PdaB YP_003119947.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: vfi:VF_0052 DNase, TatD family YP_003119948.1 KEGG: hypothetical protein; K01424 L-asparaginase; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase YP_003119949.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pna:Pnap_3986 transglutaminase domain protein YP_003119951.1 PFAM: zinc finger SWIM domain protein; KEGG: mgm:Mmc1_2013 zinc finger, SWIM domain protein YP_003119952.1 KEGG: shl:Shal_3742 AraC family transcriptional regulator YP_003119953.1 PFAM: helix-turn-helix HxlR type; KEGG: dde:Dde_1352 transcriptional regulator YP_003119954.1 PFAM: NmrA family protein; KEGG: hypothetical protein YP_003119955.1 PFAM: epoxide hydrolase domain protein; alpha/beta hydrolase; KEGG: rle:pRL120297 epoxide hydrolase YP_003119956.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: vsp:VS_2652 response regulator YP_003119957.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bsu:BSU23110 two-component sensor histidine kinase YP_003119958.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gme:Gmet_2452 thioredoxin family protein YP_003119959.1 PFAM: alpha/beta hydrolase; KEGG: ank:AnaeK_0582 alpha/beta hydrolase YP_003119960.1 KEGG: reh:H16_B1777 hypothetical protein YP_003119961.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003119962.1 KEGG: rlt:Rleg2_6375 proline-specific peptidase; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase YP_003119963.1 PFAM: protein of unknown function DUF606; KEGG: bcz:pE33L466_0268 hypothetical protein YP_003119964.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pae:PA0248 transcriptional regulator YP_003119965.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: sal:Sala_2350 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_003119967.1 PFAM: alpha/beta hydrolase; KEGG: acp:A2cp1_0578 alpha/beta hydrolase protein YP_003119968.1 KEGG: pat:Patl_3536 antibiotic biosynthesis monooxygenase YP_003119969.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: yen:YE2811 hydrogenlyase transcriptional activator YP_003119971.1 PFAM: regulatory protein LysR; KEGG: bcz:BCZK4870 LysR family transcriptional regulator YP_003119972.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region YP_003119973.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003119974.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hypothetical protein YP_003119975.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003119976.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pfo:Pfl01_3278 short-chain dehydrogenase/reductase SDR YP_003119977.1 KEGG: bvi:Bcep1808_6278 hypothetical protein YP_003119982.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: azc:AZC_3601 N-acetylmuramoyl-L- alanine amidase YP_003119984.1 KEGG: dvu:DVU1111 hypothetical protein YP_003119985.1 KEGG: dde:Dde_3383 hypothetical protein YP_003119987.1 KEGG: pst:PSPTO_0580 tail tape meausure protein YP_003119996.1 KEGG: cja:CJA_0594 hypothetical protein YP_003119999.1 KEGG: xfn:XfasM23_0780 hypothetical protein YP_003120000.1 KEGG: bra:BRADO6402 hypothetical protein YP_003120001.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A1376 methyl parathion hydrolase YP_003120002.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003120003.1 KEGG: similar to ELKS/RAB6-interacting/CAST family member 2 YP_003120004.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bcz:BCZK2243 RNA polymerase sigma-70 factor YP_003120005.1 PFAM: FecR protein; KEGG: pat:Patl_1521 FecR YP_003120006.1 KEGG: hypothetical protein YP_003120007.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sus:Acid_2309 response regulator receiver protein YP_003120008.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003120010.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator YP_003120011.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: bja:bll0593 oxidoreductase protein YP_003120012.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: sea:SeAg_B4136 cyclic nucleotide-binding domain protein YP_003120013.1 KEGG: sus:Acid_1939 hypothetical protein YP_003120015.1 KEGG: abu:Abu_1527 hypothetical protein YP_003120017.1 PFAM: hypothetical protein; KEGG: rpi:Rpic_1605 hypothetical protein YP_003120018.1 PFAM: protein of unknown function DUF1275; KEGG: bja:blr4263 hypothetical protein YP_003120019.1 PFAM: ferritin Dps family protein; KEGG: cvi:CV_4253 DNA-binding stress protein YP_003120020.1 PFAM: DoxX family protein; KEGG: hsm:HSM_1040 DoxX family protein YP_003120021.1 PFAM: amidohydrolase; KEGG: ppw:PputW619_0221 amidohydrolase 3 YP_003120022.1 PFAM: isochorismatase hydrolase; KEGG: sml:Smlt2887 hydrolase, isochorismatase family YP_003120023.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: pat:Patl_3730 glycoside hydrolase family protein YP_003120024.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2639 response regulator receiver sensor signal transduction histidine kinase YP_003120025.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: sus:Acid_2046 GAF sensor hybrid histidine kinase YP_003120026.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: xop:PXO_04305 two-component system regulatory protein YP_003120027.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dps:DP0995 helicase YP_003120028.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: xcb:XC_1474 RNA polymerase ECF-type sigma factor YP_003120030.1 PFAM: Domain of unknown function DUF1905; KEGG: xcb:XC_4260 hypothetical protein YP_003120031.1 KEGG: mmr:Mmar10_2607 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003120032.1 KEGG: kpe:KPK_4029 multidrug resistance protein RomA YP_003120033.1 KEGG: hypothetical protein YP_003120034.1 PFAM: fibronectin type III domain protein; coagulation factor 5/8 type domain protein; SMART: fibronectin type III domain protein; KEGG: pat:Patl_0123 coagulation factor 5/8 type- like YP_003120035.1 PFAM: FAD dependent oxidoreductase; KEGG: gbm:Gbem_2958 FAD dependent oxidoreductase YP_003120036.1 KEGG: mxa:MXAN_6633 hypothetical protein YP_003120037.1 KEGG: mxa:MXAN_6633 hypothetical protein YP_003120038.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003120039.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120040.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bbt:BBta_4886 sulfite oxidase (SoxC) YP_003120041.1 KEGG: cti:RALTA_B1994 cytochrome C, class I precursor YP_003120045.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcb:BCB4264_A4698 sensory box histidine kinase PhoR YP_003120046.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcy:Bcer98_3794 two component transcriptional regulator YP_003120047.1 SMART: transcription factor jumonji jmjC domain protein; KEGG: bph:Bphy_0113 transcription factor jumonji domain-containing protein YP_003120049.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_3441 TonB-dependent receptor YP_003120050.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: scl:sce3211 hypothetical protein YP_003120051.1 PFAM: YceI family protein; KEGG: bba:Bd2001 YCE I like family protein YP_003120052.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sus:Acid_5733 redoxin domain-containing protein YP_003120053.1 PFAM: glycoside hydrolase family 43; KEGG: bha:BH1867 hypothetical protein YP_003120055.1 PFAM: RagB/SusD domain protein YP_003120056.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120057.1 PFAM: FecR protein; KEGG: pen:PSEEN4566 FecR-like transmembrane sensor YP_003120058.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: smt:Smal_1610 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003120059.1 PFAM: hypothetical protein; KEGG: bca:BCE_1185 hypothetical protein YP_003120060.1 KEGG: sfu:Sfum_1727 hypothetical protein YP_003120061.1 KEGG: bba:Bd1941 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_003120062.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: hypothetical protein; K09458 3-oxoacyl- YP_003120063.1 carries the fatty acid chain in fatty acid biosynthesis YP_003120064.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dps:DP2123 multidrug ABC transporter YP_003120065.1 PFAM: acriflavin resistance protein; KEGG: mca:MCA2131 AcrB/AcrD/AcrF family protein YP_003120066.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_4198 outer membrane macrolide efflux protein YP_003120068.1 KEGG: scl:sce6540 ribose-phosphate diphosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003120069.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120070.1 KEGG: hypothetical protein YP_003120072.1 KEGG: hypothetical protein YP_003120073.1 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer YP_003120074.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: xcv:XCV2112 two-component system regulatory protein YP_003120075.1 PFAM: histidine kinase internal region; KEGG: sml:Smlt0769 transmembrane protein YP_003120076.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_003120077.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cti:RALTA_B0492 flavodoxin reductase (ferredoxin-NADPH reductase); 2Fe-2S iron-sulfur binding domain YP_003120079.1 PFAM: ferritin Dps family protein; KEGG: par:Psyc_1620 DNA-binding protein, Dps YP_003120080.1 PFAM: pirin; KEGG: prw:PsycPRwf_2303 pirin domain-containing protein YP_003120081.1 PFAM: OsmC family protein; KEGG: ilo:IL2550 organic hydroperoxide reductase YP_003120082.1 PFAM: YceI family protein; KEGG: YceI family protein YP_003120083.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator YP_003120084.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bha:BH1560 segregation and condensation protein A YP_003120086.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bpy:Bphyt_1871 large conductance mechanosensitive channel protein YP_003120087.1 PFAM: protein of unknown function DUF344; KEGG: mms:mma_3624 hypothetical protein YP_003120088.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ilo:IL0026 permease YP_003120089.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: gsu:GSU1918 ribosome recycling factor YP_003120090.1 PFAM: glycosyl transferase family 4; KEGG: pca:Pcar_1489 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1- phosphate transferase YP_003120091.1 PFAM: transketolase domain protein; KEGG: gme:Gmet_0551 transketolase subunit A YP_003120092.1 PFAM: protein of unknown function DUF214; KEGG: hypothetical protein YP_003120093.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: vvy:VV2707 ribosome-binding factor A YP_003120094.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gsu:GSU2260 ABC transporter ATP-binding protein YP_003120095.1 PFAM: glycosyl transferase family 2; haloacid dehalogenase; HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: dol:Dole_2860 glycosyl transferase family protein YP_003120096.1 KEGG: har:HEAR2768 histone H1-like protein HC2 (HC2 nucleoprotein) YP_003120097.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: ban:BA2181 isoleucyl-tRNA synthetase YP_003120098.1 KEGG: mca:MCA1928 hypothetical protein YP_003120100.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pca:Pcar_0862 AraC family transcription regulator YP_003120102.1 KEGG: bsu:BSU00060 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_003120104.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120105.1 KEGG: hypothetical protein YP_003120106.1 PFAM: protein of unknown function DUF541; KEGG: swd:Swoo_3826 hypothetical protein YP_003120107.1 PFAM: legume lectin beta domain; PKD domain containing protein; SMART: PKD domain containing protein; KEGG: dal:Dalk_1213 conserved repeat domain protein YP_003120108.1 KEGG: bcy:Bcer98_0048 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; TRCF domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein YP_003120109.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: aba:Acid345_0992 oxidoreductase FAD/NAD(P)- binding YP_003120110.1 TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: bba:Bd1147 glycyl-tRNA synthetase YP_003120111.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: har:HEAR3288 ribonuclease RNase BN (RBN) transmembrane protein YP_003120112.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bar:GBAA1554 hypothetical protein YP_003120113.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_003120115.1 PFAM: class I peptide chain release factor; KEGG: ilo:IL1553 hypothetical protein YP_003120116.1 PFAM: polysaccharide biosynthesis protein; KEGG: mca:MCA1772 polysaccharide biosynthesis protein YP_003120117.1 PFAM: beta-lactamase domain protein; KEGG: ppd:Ppro_0089 beta-lactamase domain- containing protein YP_003120118.1 KEGG: hypothetical protein YP_003120119.1 PFAM: diacylglycerol kinase; KEGG: bca:BCE_4382 diacylglycerol kinase YP_003120120.1 PFAM: Inner membrane CreD family protein; KEGG: sfu:Sfum_2654 hypothetical protein YP_003120121.1 KEGG: sus:Acid_6293 transcriptional regulator YP_003120122.1 KEGG: sus:Acid_6292 hypothetical protein YP_003120124.1 PFAM: aminotransferase class-III; KEGG: sat:SYN_02155 acetylornithine aminotransferase YP_003120125.1 KEGG: hypothetical protein YP_003120128.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity YP_003120129.1 KEGG: hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_003120130.1 KEGG: mxa:MXAN_5664 hypothetical protein YP_003120131.1 KEGG: dps:DP0636 hypothetical protein YP_003120132.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: scl:sce6501 hypothetical protein YP_003120134.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: neu:NE0042 cyclophilin-type peptidyl-prolyl cis-trans isomerase YP_003120135.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: bcy:Bcer98_3586 glycine cleavage system protein H YP_003120136.1 KEGG: ilo:IL2132 hypothetical protein YP_003120137.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: noc:Noc_1782 cation efflux protein YP_003120138.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: sat:SYN_02561 outer membrane OmpA family protein YP_003120139.1 TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: hch:HCH_01733 peptide chain release factor 1 YP_003120140.1 PFAM: amidohydrolase; KEGG: ade:Adeh_0370 amidohydrolase 1 YP_003120141.1 PFAM: mechanosensitive ion channel MscS; KEGG: ppd:Ppro_3246 MscS mechanosensitive ion channel YP_003120142.1 KEGG: saz:Sama_3212 hypothetical protein YP_003120143.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sus:Acid_0018 MerR family transcriptional regulator YP_003120144.1 PFAM: peptidase M23; KEGG: bba:Bd0398 cell wall-binding protein associated metalloendopeptidase YP_003120145.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003120147.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: mrd:Mrad2831_5428 protease Do YP_003120148.1 PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: bha:BH0865 aldehyde dehydrogenase YP_003120150.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_003120151.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003120152.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003120153.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120154.1 PFAM: RagB/SusD domain protein YP_003120155.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120156.1 KEGG: hypothetical protein YP_003120157.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120158.1 PFAM: regulatory protein LuxR; KEGG: fta:FTA_1776 IS1016 family transposase YP_003120159.1 KEGG: dol:Dole_0392 exporter of the RND superfamily protein-like protein YP_003120160.1 KEGG: saz:Sama_0993 ligand-binding sensor domain- containing protein YP_003120161.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: oan:Oant_2625 DNA repair protein RecO YP_003120162.1 PFAM: metallophosphoesterase; KEGG: gbm:Gbem_0578 metallophosphoesterase YP_003120164.1 PFAM: protein of unknown function DUF162; KEGG: dde:Dde_1844 hypothetical protein YP_003120165.1 KEGG: Os05g0458400; hypothetical protein; K08956 AFG3 family protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003120166.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: aba:Acid345_0022 iojap-related protein YP_003120167.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: apa:APP7_1940 bifunctional protein BirA YP_003120168.1 KEGG: aba:Acid345_4480 glycosyl transferase, family 39 YP_003120169.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003120170.1 PFAM: translation initiation factor SUI1; KEGG: ypm:YP_2027 translation initiation factor SUI1 YP_003120171.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: bha:BH1953 hypothetical protein YP_003120172.1 KEGG: gur:Gura_2818 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003120174.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_003120176.1 KEGG: sus:Acid_6644 excinuclease ABC subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein YP_003120177.1 KEGG: sus:Acid_4928 hypothetical protein YP_003120179.1 KEGG: azc:AZC_1915 hypothetical protein YP_003120180.1 KEGG: hypothetical protein YP_003120182.1 PFAM: protein of unknown function DUF323; KEGG: met:M446_6750 hypothetical protein YP_003120184.1 PFAM: protein of unknown function DUF255; KEGG: bsu:BSU40820 hypothetical protein YP_003120185.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: similar to uroporphyrinogen III synthase; K01719 uroporphyrinogen-III synthase YP_003120186.1 KEGG: hypothetical protein YP_003120187.1 KEGG: hypothetical protein; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003120188.1 PFAM: aldose 1-epimerase; KEGG: sus:Acid_1458 aldose 1-epimerase YP_003120189.1 PFAM: deoxyhypusine synthase; KEGG: bba:Bd2349 hypothetical protein YP_003120191.1 PFAM: protein of unknown function DUF479; KEGG: pha:PSHAa2467 hypothetical protein YP_003120192.1 KEGG: aba:Acid345_1594 hypothetical protein YP_003120193.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: mxa:MXAN_2035 Cys/Met metabolism PLP- dependent enzyme YP_003120194.1 KEGG: glo:Glov_0410 hypothetical protein YP_003120197.1 PFAM: fatty acid hydroxylase; KEGG: Fatty acid hydroxylase family protein YP_003120198.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bcy:Bcer98_0229 fumarylacetoacetate (FAA) hydrolase YP_003120199.1 PFAM: flavin reductase; KEGG: pha:PSHAa2199 hypothetical protein YP_003120200.1 KEGG: gme:Gmet_2981 hypothetical protein YP_003120201.1 PFAM: UspA domain protein; KEGG: hypothetical protein YP_003120202.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type; KEGG: gsu:GSU2271 lysyl-tRNA synthetase YP_003120203.1 PFAM: DoxX family protein; KEGG: rlt:Rleg2_0467 DoxX family protein YP_003120204.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; hypothetical protein; peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_5302 peptidase S9B dipeptidylpeptidase IV subunit YP_003120205.1 TIGRFAM: chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: hypothetical protein YP_003120206.1 PFAM: protein of unknown function DUF1239 YP_003120207.1 PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: sus:Acid_0775 peptidase S16, lon domain- containing protein YP_003120208.1 PFAM: glycosyl transferase group 1; KEGG: lch:Lcho_0975 glycosyl transferase group 1 YP_003120209.1 PFAM: glycosyl transferase group 1; KEGG: lch:Lcho_0975 glycosyl transferase group 1 YP_003120210.1 KEGG: pol:Bpro_1978 hypothetical protein YP_003120211.1 KEGG: eba:ebA2092 hypothetical protein; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase YP_003120212.1 PFAM: chloride channel core; KEGG: scl:sce0443 chloride channel YP_003120213.1 KEGG: noc:Noc_1304 hypothetical protein YP_003120215.1 PFAM: protein of unknown function DUF420; KEGG: bsu:BSU19140 hypothetical protein YP_003120216.1 PFAM: electron transport protein SCO1/SenC; KEGG: afw:Anae109_2865 electron transport protein SCO1/SenC YP_003120217.1 KEGG: sus:Acid_5593 caa(3)-type oxidase, subunit IV YP_003120218.1 PFAM: cytochrome C oxidase subunit III; KEGG: har:HEAR1118 cytochrome-C oxidase subunit III oxidoreductase protein YP_003120219.1 PFAM: cytochrome C oxidase subunit III; KEGG: sus:Acid_5591 cytochrome C oxidase, subunit III YP_003120220.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: sus:Acid_4382 protoheme IX farnesyltransferase YP_003120221.1 PFAM: cytochrome C oxidase subunit I; KEGG: rso:RSp1565 cytochrome C oxidase polypeptide I YP_003120222.1 PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; KEGG: mlo:mlr1039 cytochrome C oxidase subunit II YP_003120223.1 KEGG: mxa:MXAN_5553 hypothetical protein YP_003120224.1 PFAM: cytochrome C class I; KEGG: mxa:MXAN_5554 cytochrome C family protein YP_003120225.1 KEGG: mxa:MXAN_5555 hypothetical protein YP_003120226.1 PFAM: polysulphide reductase NrfD; KEGG: mxa:MXAN_5556 oxidoredutase membrane subunit, NrfD family YP_003120227.1 KEGG: mxa:MXAN_5557 iron-sulfur binding oxidoreductase YP_003120228.1 PFAM: cytochrome C class I; KEGG: mxa:MXAN_5558 cytochrome C YP_003120229.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; KEGG: phosphoribosylglycinamide formyltransferase; K00601 phosphoribosylglycinamide formyltransferase YP_003120231.1 PFAM: electron transport protein SCO1/SenC; KEGG: sus:Acid_4379 electron transport protein SCO1/SenC YP_003120232.1 PFAM: ferric-uptake regulator; KEGG: cti:RALTA_A0139 transcriptional regulator, FUR family YP_003120233.1 TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: hypothetical protein YP_003120234.1 KEGG: nar:Saro_3059 trigger factor YP_003120236.1 KEGG: hypothetical protein; K00133 aspartate- semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD-binding YP_003120238.1 KEGG: hypothetical protein YP_003120239.1 KEGG: mxa:MXAN_0162 hypothetical protein YP_003120240.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mxa:MXAN_6181 ammonium transporter YP_003120241.1 KEGG: glo:Glov_3444 excinuclease ABC, B subunit; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; SMART: DEAD-like helicase; helicase domain protein YP_003120242.1 PFAM: S1/P1 nuclease; KEGG: pha:PSHAb0342 S1/P1 nuclease YP_003120243.1 PFAM: PfkB domain protein; KEGG: hypothetical protein YP_003120244.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mxa:MXAN_7119 MATE efflux family protein YP_003120246.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein YP_003120248.1 PFAM: fibronectin type III domain protein; SMART: Immunoglobulin subtype; fibronectin type III domain protein; KEGG: Muc19; mucin 19 YP_003120249.1 KEGG: hypothetical protein YP_003120250.1 PFAM: transglutaminase domain protein YP_003120251.1 PFAM: chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dal:Dalk_2865 chloride channel core YP_003120252.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: aha:AHA_0343 modulator of glutathione- dependent potassium efflux system YP_003120253.1 TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: gsu:GSU2759 potassium efflux system protein YP_003120256.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aba:Acid345_3094 drug resistance transporter EmrB/QacA subfamily YP_003120257.1 PFAM: secretion protein HlyD family protein; KEGG: vsp:VS_II0849 multidrug resistance protein A YP_003120258.1 PFAM: outer membrane efflux protein; KEGG: pna:Pnap_4182 outer membrane efflux protein YP_003120259.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_0225 TetR family transcriptional regulator YP_003120261.1 PFAM: PfkB domain protein; KEGG: sfr:Sfri_1904 PfkB domain protein YP_003120262.1 KEGG: sus:Acid_2798 hypothetical protein YP_003120264.1 PFAM: RagB/SusD domain protein YP_003120265.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120266.1 KEGG: hypothetical protein YP_003120267.1 KEGG: scl:sce2447 transcriptional regulator YP_003120269.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: sde:Sde_0275 SPFH domain-containing protein/band 7 family protein YP_003120271.1 KEGG: cak:Caul_2985 hypothetical protein YP_003120272.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: sde:Sde_0114 hypothetical protein YP_003120273.1 KEGG: pmr:PMI1543 hypothetical protein YP_003120274.1 PFAM: protein of unknown function DUF458; KEGG: bcz:BCZK3743 hypothetical protein YP_003120276.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein YP_003120277.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator YP_003120278.1 KEGG: azc:AZC_1351 hypothetical protein YP_003120279.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_3180 helix-turn-helix domain- containing protein YP_003120280.1 KEGG: hch:HCH_01994 hypothetical protein YP_003120281.1 KEGG: scl:sce6314 hypothetical protein YP_003120282.1 KEGG: aby:p3ABAYE0069 restriction enzyme YP_003120283.1 KEGG: mex:Mext_0272 type II DNA modification enzyme YP_003120284.1 KEGG: afw:Anae109_4224 hypothetical protein YP_003120287.1 PFAM: glycosyl transferase family 39; KEGG: azo:azo0746 hypothetical protein YP_003120288.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: abn:AB57_1021 rieske (2Fe-2S) protein YP_003120289.1 TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: swd:Swoo_4169 GTP-binding protein HflX YP_003120290.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; hypothetical protein; KEGG: prolyl oligopeptidase family protein YP_003120291.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: cti:RALTA_A3047 enoyl-CoA hydratase YP_003120293.1 KEGG: dar:Daro_1943 hypothetical protein YP_003120294.1 KEGG: glo:Glov_2335 hypothetical protein YP_003120295.1 PFAM: SNF2-related protein; zinc finger SWIM domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: lip:LI0168 SNF2 family DNA/RNA helicase YP_003120296.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: cbs:COXBURSA331_A1552 2-phosphosulfolactate phosphatase YP_003120297.1 KEGG: sus:Acid_0961 hypothetical protein YP_003120298.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_003120299.1 PFAM: peptidase M28; peptidase M20; SMART: PDZ/DHR/GLGF domain protein; KEGG: aba:Acid345_3483 peptidase M28 YP_003120301.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_7192 hydrolase, NUDIX family YP_003120302.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003120303.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pde:Pden_3117 short-chain dehydrogenase/reductase SDR YP_003120304.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003120305.1 PFAM: NUDIX hydrolase; KEGG: dac:Daci_5608 cytidyltransferase-like protein YP_003120306.1 PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: hypothetical protein YP_003120307.1 PFAM: acriflavin resistance protein; KEGG: dde:Dde_0965 AcrB/AcrD/AcrF family protein YP_003120308.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: asa:ASA_0024 membrane-fusion protein YP_003120309.1 PFAM: outer membrane efflux protein; KEGG: dde:Dde_0961 outer membrane protein YP_003120310.1 PFAM: regulatory protein TetR; KEGG: bca:BCE_3313 TetR family transcriptional regulator YP_003120311.1 PFAM: regulatory protein TetR; KEGG: hne:HNE_0134 TetR family transcriptional regulator YP_003120314.1 PFAM: aminotransferase class I and II; KEGG: mxa:MXAN_0531 aminotransferase, class I YP_003120315.1 KEGG: aba:Acid345_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003120316.1 PFAM: fatty acid hydroxylase; KEGG: eli:ELI_10990 sterol desaturase,-like protein YP_003120319.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mms:mma_0316 thiamine biosynthesis protein ThiS YP_003120320.1 TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: mxa:MXAN_4235 thiamine biosynthesis protein ThiC YP_003120321.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_0602 thiamine monophosphate synthase YP_003120322.1 PFAM: phosphomethylpyrimidine kinase type-1; KEGG: sme:SM_b20962 phoshomethylpyrimidine kinase protein YP_003120323.1 KEGG: thiamine biosynthetic bifunctional enzyme Thi4; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003120324.1 PFAM: thiazole biosynthesis family protein; KEGG: vsa:VSAL_I2987 thiamine biosynthesis protein ThiG YP_003120325.1 TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: vpa:VP3022 thiamine biosynthesis protein ThiH YP_003120326.1 KEGG: nmu:Nmul_A1577 hypothetical protein YP_003120327.1 KEGG: dar:Daro_2056 hypothetical protein YP_003120328.1 KEGG: hypothetical protein YP_003120329.1 KEGG: hypothetical protein YP_003120330.1 KEGG: cak:Caul_0310 hypothetical protein YP_003120332.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120333.1 PFAM: RagB/SusD domain protein YP_003120334.1 KEGG: bsu:BSU07690 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003120335.1 TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; KEGG: thymidylate kinase; K00943 dTMP kinase YP_003120336.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: ccs:CCNA_02281 membrane alanine aminopeptidase YP_003120337.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cja:CJA_2991 DNA binding protein YP_003120338.1 PFAM: helix-turn-helix HxlR type; KEGG: bcn:Bcen_3630 HxlR family transcriptional regulator YP_003120339.1 PFAM: NmrA family protein; KEGG: hypothetical protein YP_003120343.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: hpy:HP0051 cytosine specific DNA methyltransferase (DDEM) YP_003120344.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ajs:Ajs_3590 XRE family transcriptional regulator YP_003120345.1 SMART: HNH nuclease YP_003120346.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: plu:plu0241 phosphatase YP_003120347.1 KEGG: GF12470 gene product from transcript GF12470- RA YP_003120348.1 PFAM: hypothetical protein; KEGG: hypothetical protein YP_003120349.1 KEGG: xac:XAC0505 hypothetical protein YP_003120350.1 PFAM: protein of unknown function DUF150; KEGG: hypothetical protein YP_003120351.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_003120352.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; KEGG: hypothetical protein; K02519 translation initiation factor IF-2 YP_003120353.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: esa:ESA_03285 peptidyl-prolyl cis-trans isomerase SurA YP_003120354.1 PFAM: glutamine amidotransferase class-II; KEGG: hypothetical protein; K00764 amidophosphoribosyltransferase YP_003120355.1 PFAM: phosphoglycerate mutase; KEGG: abu:Abu_1105 phosphohistidine phosphatase YP_003120356.1 KEGG: PCA reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding YP_003120357.1 PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: ecf:ECH74115_B0084 nuclease homolog YP_003120358.1 KEGG: EMB2411 (EMBRYO DEFECTIVE 2411); ATP- dependent DNA helicase; K10742 DNA replication ATP- dependent helicase Dna2 YP_003120359.1 KEGG: dac:Daci_1962 HNH endonuclease YP_003120360.1 TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS; KEGG: scl:sce3738 dihydrouridine synthase TIM- barrel protein nifR3 YP_003120361.1 PFAM: abortive infection protein; KEGG: mxa:MXAN_3287 CAAX amino terminal protease family protein YP_003120363.1 PFAM: phosphatidate cytidylyltransferase; KEGG: ppr:PBPRA2963 phosphatidate cytidylyltransferase YP_003120364.1 KEGG: hypothetical protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related YP_003120366.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: vha:VIBHAR_06682 nucleotidase YP_003120367.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aba:Acid345_2262 short-chain dehydrogenase/reductase SDR YP_003120368.1 KEGG: mxa:MXAN_5660 BatD protein YP_003120369.1 PFAM: SH3 type 3 domain protein; KEGG: dal:Dalk_3468 hypothetical protein YP_003120370.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: cps:CPS_2278 LytTr DNA-binding response regulator YP_003120371.1 PFAM: histidine kinase internal region; KEGG: hypothetical protein YP_003120372.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dol:Dole_0622 two component transcriptional regulator YP_003120373.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_0508 integral membrane sensor signal transduction histidine kinase YP_003120375.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: sat:SYN_01278 hypothetical protein YP_003120376.1 PFAM: pseudouridine synthase; KEGG: pfo:Pfl01_4941 ribosomal large subunit pseudouridine synthase E YP_003120377.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bba:Bd2590 transcriptional regulatory protein YP_003120378.1 PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; KEGG: pat:Patl_2068 heavy metal translocating P- type ATPase YP_003120379.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3- type; KEGG: mgm:Mmc1_2359 cytochrome oxidase maturation protein, cbb3-type YP_003120380.1 CcoN/CcoO FixN/FixO YP_003120382.1 PFAM: cytochrome C class I; KEGG: mxa:MXAN_5539 cytochrome C oxidase, cbb3- type, subunit III YP_003120383.1 TIGRFAM: cytochrome C oxidase accessory protein CcoG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: hypothetical protein YP_003120384.1 PFAM: FixH family protein; KEGG: azo:azo1346 hypothetical protein YP_003120385.1 KEGG: sus:Acid_3511 hypothetical protein YP_003120386.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_003120387.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase LpxD; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_3102 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_003120389.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein YP_003120390.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pde:Pden_0197 3-hydroxybutyryl-CoA dehydrogenase YP_003120391.1 KEGG: mca:MCA0697 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003120392.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcy:Bcer98_4006 two component transcriptional regulator YP_003120393.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0410 periplasmic sensor signal transduction histidine kinase YP_003120394.1 KEGG: hypothetical protein YP_003120395.1 KEGG: hypothetical protein YP_003120396.1 KEGG: hypothetical protein YP_003120397.1 PFAM: xylose isomerase; KEGG: pat:Patl_2687 twin-arginine translocation pathway signal YP_003120398.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csa:Csal_2901 GCN5-related N- acetyltransferase YP_003120399.1 KEGG: glo:Glov_2384 hypothetical protein YP_003120400.1 PFAM: Radical SAM domain protein; KEGG: dde:Dde_0797 hypothetical protein YP_003120401.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: mxa:MXAN_6280 hypothetical protein YP_003120402.1 KEGG: smt:Smal_3810 hypothetical protein YP_003120403.1 PFAM: peptidase M16 domain protein; KEGG: ade:Adeh_0102 peptidase M16-like YP_003120404.1 PFAM: peptidase M16 domain protein; KEGG: mxa:MXAN_1624 peptidase, M16 (pitrilysin) family YP_003120405.1 KEGG: vpa:VP1847 hypothetical protein YP_003120406.1 PFAM: protein of unknown function DUF161; KEGG: gur:Gura_0624 hypothetical protein YP_003120407.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: hypothetical protein YP_003120409.1 PFAM: glycosyltransferase 28 domain; KEGG: lip:LI1104 UDP-N-acetylglucosamine:LPS N- acetylglucosamine transferase YP_003120410.1 PFAM: arsenate reductase and related; KEGG: cak:Caul_2487 arsenate reductase and related YP_003120411.1 KEGG: pca:Pcar_0592 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease YP_003120412.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmr:Mmar10_2812 GCN5-related N- acetyltransferase YP_003120413.1 PFAM: peptidase C1B bleomycin hydrolase; KEGG: bba:Bd1649 aminopeptidase C YP_003120414.1 PFAM: pectate lyase; KEGG: scl:sce4938 pectate lyase YP_003120416.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: ppw:PputW619_3788 SUA5/YciO/YrdC/YwlC family protein YP_003120417.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: sfu:Sfum_3374 monofunctional biosynthetic peptidoglycan transglycosylase YP_003120418.1 KEGG: prw:PsycPRwf_1459 ATPase/kinase involved in NAD metabolism-like protein YP_003120419.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: cps:CPS_0065 nicotinamide mononucleotide transporter PnuC YP_003120420.1 KEGG: scl:sce6728 hypothetical protein YP_003120421.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: gbe:GbCGDNIH1_0150 Fe-S cluster assembly protein NFU YP_003120422.1 PFAM: protein of unknown function DUF187; KEGG: bcr:BCAH187_A2557 hypothetical protein YP_003120423.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: cps:CPS_2981 alkaline phosphatase YP_003120424.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bbt:BBta_7586 glycerophosphoryl diester phosphodiesterase YP_003120425.1 PFAM: major intrinsic protein; KEGG: pha:PSHAb0552 glycerol diffusion channel YP_003120426.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: bph:Bphy_0419 glycerol kinase YP_003120427.1 PFAM: FAD dependent oxidoreductase; KEGG: gme:Gmet_1677 FAD dependent oxidoreductase YP_003120428.1 PFAM: regulatory protein DeoR; hypothetical protein; SMART: regulatory protein DeoR; KEGG: sml:Smlt4437 aga operon DeoR family transcriptional repressor YP_003120429.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: vco:VC0395_A1952 glutamate synthase, large subunit YP_003120430.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vpa:VP0483 glutamate synthase subunit beta YP_003120433.1 PFAM: protein of unknown function DUF490; KEGG: hap:HAPS_0221 tubulin binding protein YP_003120434.1 PFAM: surface antigen (D15); KEGG: vok:COSY_0507 surface antigen family protein YP_003120435.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pmy:Pmen_0852 rare lipoprotein A YP_003120436.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pzu:PHZ_c2654 intracellular protease/amidase YP_003120438.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: magnesium and cobalt transport protein CorA; K03284 metal ion transporter, MIT family YP_003120440.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: hypothetical protein YP_003120441.1 TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: mxa:MXAN_2603 quinolinate synthetase YP_003120444.1 PFAM: FeoA family protein; KEGG: glo:Glov_1786 FeoA family protein YP_003120445.1 PFAM: protein of unknown function UPF0054; KEGG: sun:SUN_1265 metalloprotease YP_003120448.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_003120449.1 KEGG: bvi:Bcep1808_2411 3-carboxymuconate cyclase- like protein YP_003120450.1 KEGG: hypothetical protein YP_003120451.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: bha:BH2858 cardiolipin synthetase YP_003120452.1 KEGG: eba:ebA5435 DNA/RNA helicase YP_003120453.1 PFAM: von Willebrand factor A; von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mpo:Mpop_1510 von Willebrand factor A YP_003120454.1 KEGG: ecm:EcSMS35_3513 hypothetical protein YP_003120455.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: ecm:EcSMS35_3512 ATPase, AAA family YP_003120456.1 KEGG: ecm:EcSMS35_3511 hypothetical protein YP_003120457.1 PFAM: zinc finger SWIM domain protein; KEGG: hch:HCH_05567 SWIM Zn-chelating domain- containing protein YP_003120459.1 KEGG: mgm:Mmc1_1599 secreted hydrolase-like protein YP_003120460.1 PFAM: ABC transporter substrate-binding protein; major facilitator superfamily MFS_1; KEGG: rpi:Rpic_3787 general substrate transporter YP_003120461.1 KEGG: bce:BC2796 ribose-5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase YP_003120462.1 PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: afr:AFE_2216 hypothetical protein YP_003120463.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: hch:HCH_04507 rhodanese-related sulfurtransferase YP_003120464.1 KEGG: glo:Glov_1382 hypothetical protein YP_003120465.1 KEGG: virion core protein (lumpy skin disease virus)-like protein YP_003120467.1 PFAM: protein of unknown function DUF885; KEGG: slo:Shew_2471 hypothetical protein YP_003120468.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gdi:GDI1376 AraC family transcriptional regulator YP_003120469.1 KEGG: mxa:MXAN_1805 hypothetical protein YP_003120470.1 PFAM: integrase catalytic region; KEGG: mgm:Mmc1_2644 integrase, catalytic region YP_003120471.1 PFAM: transposase IS3/IS911 family protein; KEGG: dps:DP1713 transposase YP_003120472.1 PFAM: protein of unknown function DUF1130; KEGG: mxa:MXAN_1806 hypothetical protein YP_003120473.1 KEGG: mgm:Mmc1_3073 hypothetical protein YP_003120474.1 KEGG: gbm:Gbem_3690 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP- dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein YP_003120475.1 KEGG: ppd:Ppro_0969 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_003120476.1 PFAM: Nucleotidyl transferase; KEGG: mannose-1-phosphate guanylyltransferase; K00971 mannose-1-phosphate guanylyltransferase YP_003120477.1 PFAM: aminotransferase class I and II; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bph:Bphy_1981 aminotransferase class I and II YP_003120478.1 PFAM: carbonic anhydrase; KEGG: neu:NE1926 carbonic anhydrase YP_003120479.1 PFAM: sulphate transporter; xanthine/uracil/vitamin C permease; KEGG: neu:NE1927 sulfate transporter YP_003120481.1 PFAM: transcriptional regulator PadR family protein; KEGG: sdn:Sden_0473 transcriptional regulator PadR- like protein YP_003120482.1 PFAM: PspC domain protein; KEGG: cbs:COXBURSA331_A1174 PspC domain-containing protein YP_003120483.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; ferrous iron transport B domain protein; KEGG: rpa:RPA4635 ferrous iron transport protein B YP_003120484.1 PFAM: peptidase M28; KEGG: cak:Caul_3463 peptidase M28 YP_003120485.1 KEGG: hypothetical protein YP_003120486.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA YP_003120487.1 PFAM: phenylacetic acid degradation B; KEGG: ppw:PputW619_2632 phenylacetate-CoA oxygenase, PaaH subunit YP_003120488.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: nha:Nham_0930 phenylacetate-CoA oxygenase, PaaI subunit YP_003120489.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: dar:Daro_0380 phenylacetate-CoA oxygenase, PaaJ subunit YP_003120490.1 KEGG: gur:Gura_4130 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003120491.1 PFAM: protein of unknown function UPF0118; KEGG: bpt:Bpet2718 hypothetical protein YP_003120495.1 PFAM: Radical SAM domain protein; KEGG: cbg:CbuG_1165 radical SAM superfamily protein YP_003120496.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: efe:EFER_2188 membrane-bound hydrolase YP_003120500.1 KEGG: shm:Shewmr7_0115 hypothetical protein YP_003120501.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: dol:Dole_3203 DegT/DnrJ/EryC1/StrS aminotransferase YP_003120502.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; KEGG: pca:Pcar_1946 3-deoxy-manno-octulosonate cytidylyltransferase YP_003120503.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dol:Dole_3202 iron-containing alcohol dehydrogenase YP_003120504.1 PFAM: major facilitator superfamily MFS_1; KEGG: bat:BAS2186 major facilitator family transporter YP_003120505.1 PFAM: protein of unknown function DUF88; KEGG: cti:RALTA_A2999 hypothetical protein YP_003120507.1 PFAM: dehydrogenase E1 component; transketolase domain protein; transketolase central region; KEGG: jan:Jann_3081 dehydrogenase, E1 component YP_003120508.1 PFAM: membrane protein of unknown function; KEGG: gbm:Gbem_2195 membrane protein of unknown function YP_003120509.1 PFAM: xylose isomerase; KEGG: mno:Mnod_3088 hydroxypyruvate isomerase YP_003120510.1 PFAM: protein of unknown function DUF323; KEGG: sus:Acid_6144 hypothetical protein YP_003120511.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_2550 oxidoreductase domain- containing protein YP_003120512.1 PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: aba:Acid345_4495 D-Ala-D-Ala carboxypeptidase. serine peptidase. MEROPS family S13 YP_003120514.1 KEGG: sde:Sde_2844 hypothetical protein YP_003120516.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_4241 oxidoreductase domain- containing protein YP_003120517.1 KEGG: sus:Acid_7383 Tat pathway signal sequence domain-containing protein YP_003120518.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: sus:Acid_7382 glucose-methanol-choline oxidoreductase YP_003120519.1 PFAM: carbohydrate kinase FGGY; KEGG: sugar kinase; K00851 gluconokinase YP_003120520.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: pca:Pcar_1304 DNA mismatch repair enzyme YP_003120521.1 KEGG: aba:Acid345_2786 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B YP_003120522.1 PFAM: YCII-related; KEGG: bcy:Bcer98_2373 YCII-related YP_003120524.1 PFAM: ABC transporter related; KEGG: ban:BA2603 ABC transporter, ATP-binding protein YP_003120525.1 PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_5698 ABC transporter, permease protein YP_003120526.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: swi:Swit_1629 stress responsive alpha-beta barrel domain-containing protein YP_003120527.1 KEGG: swp:swp_0627 hypothetical protein YP_003120528.1 KEGG: ilo:IL0073 hypothetical protein YP_003120529.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pna:Pnap_1343 geranylgeranyl reductase YP_003120530.1 PFAM: conserved hypothetical protein; KEGG: vsa:VSAL_I1086 hypothetical protein YP_003120531.1 SMART: hypothetical protein; KEGG: dol:Dole_2419 hypothetical protein YP_003120532.1 KEGG: pna:Pnap_4852 hypothetical protein YP_003120535.1 KEGG: hypothetical protein YP_003120536.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; KEGG: gsu:GSU3213 GTPase ObgE YP_003120537.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; KEGG: sfu:Sfum_1576 adenylate kinases YP_003120538.1 PFAM: beta-lactamase; glycoside hydrolase family 3 domain protein; KEGG: aba:Acid345_4564 glycoside hydrolase, family 3-like YP_003120540.1 PFAM: cytochrome oxidase assembly; KEGG: rce:RC1_2704 cytochrome oxidase assembly protein YP_003120541.1 KEGG: msl:Msil_0816 hypothetical protein YP_003120542.1 PFAM: alpha/beta hydrolase; KEGG: bba:Bd0873 hydrolytic enzyme YP_003120543.1 TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: sat:SYN_00939 GTP-binding protein TypA/BipA YP_003120544.1 KEGG: vha:VIBHAR_06700 hypothetical protein YP_003120546.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pnu:Pnuc_0516 protein of unknown function DUF306, MetA and HslJ YP_003120547.1 KEGG: similar to Fibrocystin-L precursor (polycystic kidney and hepatic disease 1-like protein 1) (PKHD1-like protein 1) YP_003120548.1 KEGG: xfn:XfasM23_0959 hypothetical protein YP_003120549.1 KEGG: hypothetical protein YP_003120550.1 PFAM: ribonuclease HII/HIII; KEGG: dar:Daro_1756 ribonuclease HII/HIII YP_003120551.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: hypothetical protein YP_003120553.1 KEGG: gdi:GDI2296 protein RecA (recombinase A); TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_003120554.1 PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: aba:Acid345_0702 DNA-3-methyladenine glycosylase II YP_003120555.1 PFAM: peptidase M28; KEGG: bra:BRADO0660 aminopeptidase; exported protein YP_003120556.1 KEGG: ppd:Ppro_0031 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; tRNA synthetase class I (M) YP_003120557.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: sat:SYN_02542 hypothetical protein YP_003120558.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: mxa:MXAN_6651 endonuclease/exonuclease/phosphatase family protein YP_003120559.1 PFAM: rhomboid family protein; KEGG: bmj:BMULJ_05605 uncharacterized membrane protein YP_003120560.1 PFAM: rhomboid family protein; KEGG: aeh:Mlg_2078 rhomboid family protein YP_003120561.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (uracil-5)-methyltransferase; KEGG: dol:Dole_1585 RNA methyltransferase YP_003120562.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003120566.1 PFAM: methylenetetrahydrofolate reductase; KEGG: hypothetical protein YP_003120567.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tgr:Tgr7_0727 ABC transporter related YP_003120568.1 PFAM: GH3 auxin-responsive promoter; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein YP_003120569.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bsu:BSU15910 beta-ketoacyl-acyl carrier protein reductase YP_003120570.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: cja:CJA_0344 gluconolactonase precursor YP_003120572.1 KEGG: cvi:CV_0742 hypothetical protein YP_003120573.1 PFAM: PSP1 domain protein; KEGG: dal:Dalk_0025 PSP1 domain protein YP_003120574.1 KEGG: glo:Glov_1947 DNA polymerase III, delta prime subunit YP_003120575.1 PFAM: glutathione peroxidase; KEGG: sus:Acid_7250 glutathione peroxidase YP_003120576.1 KEGG: xau:Xaut_3090 phosphoribosyltransferase YP_003120577.1 TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; KEGG: bsu:BSU00870 DNA repair protein RadA YP_003120578.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: bha:BH1677 hypothetical protein YP_003120579.1 TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: csa:Csal_2207 50S ribosomal protein L13 YP_003120580.1 PFAM: ribosomal protein S9; KEGG: acp:A2cp1_3517 ribosomal protein S9 YP_003120581.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: mxa:MXAN_5344 ribosomal protein S2 YP_003120582.1 TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: mca:MCA0568 elongation factor Ts YP_003120583.1 Catalyzes the phosphorylation of UMP to UDP YP_003120584.1 KEGG: hdu:HD0195 hypothetical protein YP_003120585.1 KEGG: bur:Bcep18194_A5900 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding YP_003120587.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: mfa:Mfla_0016 nucleoid protein HU beta subunit YP_003120588.1 KEGG: lpc:LPC_2781 hypothetical protein YP_003120589.1 KEGG: tgr:Tgr7_0109 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase YP_003120590.1 KEGG: oan:Oant_0197 methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_003120591.1 PFAM: homocysteine S-methyltransferase; KEGG: hch:HCH_02542 B12-dependent methionine synthase YP_003120593.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_003120595.1 PFAM: UvrD/REP helicase; KEGG: glo:Glov_1066 UvrD/REP helicase YP_003120596.1 KEGG: ppd:Ppro_2243 hypothetical protein YP_003120597.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sus:Acid_7860 ECF subfamily RNA polymerase sigma-24 factor YP_003120601.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sus:Acid_6667 LysR family transcriptional regulator YP_003120602.1 KEGG: hypothetical protein YP_003120603.1 KEGG: Os02g0603800; hypothetical protein; K03526 4- hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; PFAM: IspG family protein YP_003120604.1 PFAM: hypothetical protein; hypothetical protein; Tetratricopeptide TPR_3; SMART: hypothetical protein; KEGG: tdn:Suden_0657 von Willebrand factor, type A YP_003120605.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: bba:Bd2793 hypothetical protein YP_003120606.1 PFAM: penicillin-binding protein transpeptidase; KEGG: son:SO_0837 beta-lactamase YP_003120607.1 KEGG: hypothetical protein; K00639 glycine C- acetyltransferase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; aminotransferase class-III YP_003120608.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bar:GBAA1113 RNA polymerase sigma factor YP_003120609.1 KEGG: GA26236 gene product from transcript GA26236- RA YP_003120612.1 PFAM: peptidase M16 domain protein; KEGG: gsu:GSU0927 M16 family peptidase YP_003120613.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: shn:Shewana3_3390 hypothetical protein YP_003120614.1 KEGG: net:Neut_2408 esterase/lipase/thioesterase family protein YP_003120616.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: tgr:Tgr7_1019 acetate--CoA ligase YP_003120618.1 SMART: helix-turn-helix domain protein; KEGG: hit:NTHI1517 hypothetical protein YP_003120620.1 PFAM: 5 nucleotidase deoxy cytosolic type C; KEGG: eta:ETA_22130 5'(3')-deoxyribonucleotidase YP_003120621.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: scl:sce4004 DeoR family transcriptional regulator YP_003120622.1 PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_3360 major facilitator transporter YP_003120624.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_003120625.1 PFAM: peptidase S41; hypothetical protein; SMART: peptidase S41; KEGG: sus:Acid_3719 peptidase S41 YP_003120626.1 TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: dol:Dole_0767 DNA internalization-related competence protein ComEC/Rec2 YP_003120627.1 involved in de novo purine biosynthesis YP_003120628.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pha:PSHAa2438 RNA polymerase sigma factor YP_003120629.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: CG30494 YP_003120630.1 KEGG: azc:AZC_0471 hypothetical protein YP_003120631.1 PFAM: protein of unknown function DUF162; KEGG: aba:Acid345_2721 iron-sulfur cluster binding protein YP_003120634.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: wbm:Wbm0070 Mg2+/Co2+ transporter YP_003120635.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: afr:AFE_1260 single-strand binding protein YP_003120636.1 KEGG: bcy:Bcer98_0443 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein YP_003120637.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: sus:Acid_4299 histone family protein DNA- binding protein YP_003120638.1 KEGG: sat:SYN_01095 hypothetical protein YP_003120639.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: pca:Pcar_2584 RNase EG YP_003120640.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding domain 1 protein; KEGG: rce:RC1_2426 peptidoglycan binding domain protein YP_003120641.1 TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: bba:Bd1766 translation initiation inhibitor YP_003120642.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_C0888 3-hydroxyacyl-CoA dehydrogenase YP_003120643.1 PFAM: peptidase M22 glycoprotease; KEGG: peptidase M22 glycoprotease YP_003120644.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: vvy:VV0683 transcriptional activator YP_003120645.1 PFAM: beta-lactamase domain protein; rhodanese domain protein; SMART: rhodanese domain protein; KEGG: metallo-beta-lactamase superfamily protein YP_003120646.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: acr:Acry_3136 short-chain dehydrogenase/reductase SDR YP_003120647.1 PFAM: transport-associated; KEGG: nar:Saro_3315 transport-associated YP_003120648.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: dol:Dole_1445 lipid A biosynthesis acyltransferase YP_003120649.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sat:SYN_00424 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_003120650.1 PFAM: YhhN family protein; KEGG: pat:Patl_3847 YhhN-like YP_003120651.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sde:Sde_0326 response regulator receiver domain-containing protein YP_003120652.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: cps:CPS_4704 sigma-54 dependent DNA-binding response regulator YP_003120653.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sde:Sde_0328 ABC transporter permease YP_003120654.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003120655.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_4701 ABC transporter, ATP-binding protein YP_003120656.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003120657.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003120658.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_3505 ABC transporter, permease protein YP_003120659.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003120660.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_7144 ABC transporter, ATP-binding protein YP_003120661.1 PFAM: outer membrane efflux protein; KEGG: dal:Dalk_4861 outer membrane efflux protein YP_003120662.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_3323 secretion protein HlyD YP_003120663.1 KEGG: hypothetical protein YP_003120664.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: pat:Patl_0130 alpha-1,2-mannosidase YP_003120665.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bsu:BSU22830 NAD(P)H-dependent glycerol-3- phosphate dehydrogenase YP_003120666.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hypothetical protein YP_003120668.1 KEGG: mxa:MXAN_6481 hypothetical protein YP_003120669.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: bba:Bd1394 ATP-dependent RNA helicase DbpA YP_003120670.1 PFAM: FecR protein; KEGG: abn:AB57_0986 transmembrane sensor protein FecR YP_003120671.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: abu:Abu_2165 ECF subfamily RNA polymerase sigma factor YP_003120672.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120673.1 PFAM: RagB/SusD domain protein YP_003120674.1 PFAM: metallophosphoesterase; KEGG: shn:Shewana3_1086 metallophosphoesterase YP_003120677.1 KEGG: swd:Swoo_1374 metallophosphoesterase YP_003120681.1 PFAM: tyrosine protein kinase; lanthionine synthetase C family protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: hypothetical protein YP_003120684.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4561 transcriptional regulator, AraC family YP_003120685.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: aci:ACIAD0258 type 4 fimbriae expression regulatory protein YP_003120686.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: aba:Acid345_2604 two component, sigma54 specific, transcriptional regulator, fis family YP_003120687.1 PFAM: protein of unknown function DUF1452; KEGG: reh:H16_B2344 hypothetical protein YP_003120688.1 KEGG: sfu:Sfum_0828 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein YP_003120689.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pha:PSHAa2395 two-component response regulator YP_003120690.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: hch:HCH_04931 signal transduction histidine kinase YP_003120691.1 KEGG: gdi:GDI0805 hypothetical protein YP_003120692.1 PFAM: protein of unknown function DUF892; KEGG: azc:AZC_2285 hypothetical protein YP_003120693.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azo:azo1732 short-chain dehydrogenase family protein YP_003120694.1 KEGG: mfa:Mfla_0558 DNA topoisomerase, type I YP_003120696.1 KEGG: gbm:Gbem_0141 Ku protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein YP_003120697.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; ATP dependent DNA ligase domain protein; KEGG: gbm:Gbem_0128 DNA ligase D YP_003120699.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bca:BCE_5316 chromate ion transporter YP_003120700.1 PFAM: protein of unknown function DUF900 hydrolase family protein YP_003120701.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: xca:xccb100_1624 2OG-Fe(II) oxygenase superfamily protein YP_003120702.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: sde:Sde_2060 GTP cyclohydrolase I YP_003120703.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003120704.1 KEGG: gbm:Gbem_3713 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; ribonuclease B OB region domain; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; AAA ATPase YP_003120705.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: eli:ELI_12660 two-component response regulator YP_003120706.1 PFAM: histidine kinase internal region; KEGG: hypothetical protein YP_003120707.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rpa:RPA0404 pterin-4-alpha-carbinolamine dehydratase YP_003120709.1 KEGG: hypothetical protein YP_003120710.1 PFAM: methyltransferase; KEGG: bha:BH3261 hypothetical protein YP_003120711.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eta:ETA_00020 AsnC-family transcriptional regulator YP_003120712.1 KEGG: sit:TM1040_2226 tryptophan 2,3-dioxygenase YP_003120713.1 KEGG: PHD Zn finger-containing protein YP_003120714.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_003120715.1 KEGG: YALI0C16434p; K00942 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region YP_003120716.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ppd:Ppro_0762 hypothetical protein YP_003120717.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bha:BH0553 hypothetical protein YP_003120718.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase; KEGG: sat:SYN_02366 ribose 5-phosphate isomerase YP_003120719.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ank:AnaeK_1486 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003120720.1 PFAM: UvrD/REP helicase; KEGG: bha:BH0648 ATP-dependent DNA helicase YP_003120721.1 PFAM: regulatory protein RecX; KEGG: bcy:Bcer98_0437 recombination regulator RecX YP_003120722.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: csa:Csal_1951 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003120723.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bsu:BSU37020 hypothetical protein YP_003120724.1 KEGG: vpa:VP0829 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003120725.1 KEGG: bba:Bd3831 hypothetical protein YP_003120726.1 KEGG: gur:Gura_0692 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003120727.1 PFAM: inositol monophosphatase; KEGG: sat:SYN_00928 myo-inositol-1(or 4)- monophosphatase YP_003120728.1 PFAM: GH3 auxin-responsive promoter; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein YP_003120729.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bha:BH2170 hypothetical protein YP_003120730.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: eba:ebA3150 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_003120731.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: hypothetical protein YP_003120732.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: pha:PSHAa0111 hypothetical protein YP_003120733.1 TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_0532 TonB-dependent receptor YP_003120734.1 PFAM: phytase; KEGG: bsu:BSU19800 phytase YP_003120735.1 KEGG: bsu:BSU08580 hypothetical protein YP_003120736.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase YP_003120737.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bcz:BCZK4732 acyl-CoA dehydrogenase YP_003120738.1 PFAM: alpha/beta hydrolase; KEGG: bsu:BSU31420 hypothetical protein YP_003120739.1 PFAM: glycosyl transferase family 2; KEGG: zmo:ZMO0654 glycosyltransferase YP_003120740.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lip:LI0250 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_003120742.1 PFAM: glycosyl transferase group 1; KEGG: pfo:Pfl01_5687 glycosyl transferase, group 1 YP_003120744.1 KEGG: sml:Smlt0443 hypothetical protein YP_003120745.1 PFAM: colicin V production protein; KEGG: par:Psyc_1283 colicin V production protein YP_003120746.1 PFAM: alpha/beta hydrolase; KEGG: plu:plu2202 hypothetical protein YP_003120747.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: bsu:BSU29700 acetoin dehydrogenase YP_003120748.1 catalyzes the phosphorylation of NAD to NADP YP_003120750.1 KEGG: gbm:Gbem_2752 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003120751.1 PFAM: surface antigen variable number repeat protein; surface antigen (D15); KEGG: hch:HCH_05243 outer membrane protein/protective antigen OMA87 YP_003120752.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: har:HEAR1344 chaperone for outer membrane protein YP_003120753.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: tbd:Tbd_0794 outer membrane protein YP_003120754.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: sus:Acid_1093 50S ribosomal protein L34P YP_003120756.1 PFAM: protein of unknown function DUF37; KEGG: nmn:NMCC_0314 hypothetical protein YP_003120757.1 KEGG: probable carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003120758.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_0576 oxidoreductase domain- containing protein YP_003120759.1 PFAM: protein of unknown function DUF1080; KEGG: pzu:PHZ_c2159 hypothetical protein YP_003120760.1 PFAM: manganese and iron superoxide dismutase; KEGG: tcx:Tcr_0237 superoxide dismutase YP_003120761.1 KEGG: sus:Acid_1603 two component LuxR family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR YP_003120763.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: ilo:IL0146 membrane protease family stomatin/prohibitin-like protein YP_003120764.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pmr:PMI1882 tRNA-specific adenosine deaminase YP_003120765.1 KEGG: bsu:BSU06620 NAD-dependent DNA ligase LigA; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4- type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase; BRCT domain protein YP_003120767.1 PFAM: methylmalonyl-CoA mutase; ArgK protein; cobalamin B12-binding domain protein; KEGG: mxa:MXAN_2261 B12 binding domain/ArgK/methylmalonyl-CoA mutase family protein YP_003120768.1 PFAM: conserved hypothetical protein; KEGG: aba:Acid345_3674 uncharacterised conserved protein UCP028846 YP_003120769.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: scl:sce1459 MutS-like mismatch repair protein, ATPases YP_003120770.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: csa:Csal_1500 radical SAM YP_003120771.1 KEGG: bce:BC2737 hypothetical protein YP_003120772.1 SMART: AAA ATPase; KEGG: hypothetical protein; K08900 mitochondrial chaperone BCS1 YP_003120773.1 PFAM: fatty acid hydroxylase; KEGG: ppw:PputW619_5042 fatty acid hydroxylase YP_003120774.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sit:TM1040_2723 RNA polymerase sigma factor YP_003120775.1 KEGG: apj:APJL_1492 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like YP_003120776.1 KEGG: bmj:BMULJ_02294 hypothetical protein YP_003120777.1 PFAM: polysaccharide export protein; KEGG: saz:Sama_2264 ClpX, ATPase regulatory subunit YP_003120778.1 PFAM: lipopolysaccharide biosynthesis protein YP_003120779.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: wsu:WS0025 UDP-glucuronic acid epimerase YP_003120780.1 PFAM: polysaccharide biosynthesis protein; KEGG: cps:CPS_0582 polysaccharide biosynthesis protein YP_003120781.1 KEGG: neu:NE2270 hypothetical protein YP_003120782.1 PFAM: glycosyl transferase group 1; KEGG: gbm:Gbem_3442 glycosyl transferase group 1 YP_003120783.1 KEGG: bsu:BSU34310 hypothetical protein YP_003120784.1 PFAM: glycosyl transferase family 2; KEGG: abu:Abu_1811 glycosyltransferase YP_003120785.1 KEGG: spe:Spro_0163 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003120786.1 KEGG: exoL; succinoglycan biosynthesis protein YP_003120787.1 KEGG: spe:Spro_2570 hypothetical protein YP_003120788.1 PFAM: glycosyl transferase group 1; KEGG: ecp:ECP_2075 glycosyltransferase YP_003120789.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase YP_003120790.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; KEGG: gsu:GSU0627 GDP-fucose synthetase YP_003120792.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcr:BCAH187_A2308 ABC transporter, ATP- binding protein YP_003120794.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_1342 sigma-24, ECF subfamily YP_003120795.1 PFAM: FecR protein; KEGG: FecR protein YP_003120796.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003120801.1 KEGG: xca:xccb100_4121 hypothetical protein YP_003120802.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_00532 AraC-type DNA-binding domain- containing protein YP_003120803.1 KEGG: gur:Gura_1130 MarR family transcriptional regulator YP_003120805.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: hch:HCH_01287 epimerase, PhzC/PhzF-like protein YP_003120806.1 PFAM: protein of unknown function DUF1486; KEGG: ott:OTT_0545 hypothetical protein YP_003120808.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hch:HCH_00176 amidohydrolase YP_003120811.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003120812.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpy:Bphyt_6332 short-chain dehydrogenase/reductase SDR YP_003120813.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cvi:CV_4051 long chain fatty-acid CoA ligase YP_003120814.1 KEGG: scl:sce2799 hypothetical protein YP_003120815.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2794 major facilitator superfamily MFS_1 YP_003120816.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: dps:DP2324 transcription regulator YP_003120817.1 KEGG: TPR Domain containing protein YP_003120818.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sde:Sde_3071 MCP methyltransferase, CheR-type YP_003120819.1 PFAM: glycosyl transferase family 2; KEGG: gsu:GSU0631 glycosyl transferase, group 2 family protein YP_003120820.1 KEGG: sfr:Sfri_3542 hypothetical protein YP_003120822.1 KEGG: sus:Acid_1050 hypothetical protein YP_003120823.1 KEGG: psa:PST_1419 hypothetical protein YP_003120824.1 KEGG: tmz:Tmz1t_0051 conserved hypothetical cytosolic protein YP_003120825.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: iron-containing alcohol dehydrogenase YP_003120826.1 KEGG: pmr:PMI1930 hypothetical protein YP_003120830.1 KEGG: hypothetical protein YP_003120831.1 PFAM: alpha/beta hydrolase; KEGG: sus:Acid_1077 alpha/beta hydrolase domain- containing protein YP_003120832.1 PFAM: helix-turn-helix HxlR type; KEGG: afr:AFE_0198 transcriptional regulator YP_003120833.1 PFAM: beta-lactamase; KEGG: bca:BCE_2264 hypothetical protein YP_003120834.1 PFAM: YceI family protein; KEGG: bba:Bd2001 YCE I like family protein YP_003120835.1 TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_B3740 phenylacetic acid degradation protein paaN2 YP_003120836.1 SMART: hypothetical protein; KEGG: TPR Domain containing protein YP_003120837.1 PFAM: conserved hypothetical protein; KEGG: bcy:Bcer98_2084 hypothetical protein YP_003120838.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_003120839.1 KEGG: rec:RHECIAT_CH0002212 hypothetical protein YP_003120840.1 PFAM: protein of unknown function DUF502; KEGG: sat:SYN_00388 hypothetical protein YP_003120841.1 PFAM: regulatory protein TetR; KEGG: bca:BCE_3313 TetR family transcriptional regulator YP_003120842.1 PFAM: outer membrane efflux protein; KEGG: sus:Acid_5987 outer membrane efflux protein YP_003120843.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_1649 RND family efflux transporter MFP subunit YP_003120844.1 PFAM: acriflavin resistance protein; KEGG: dol:Dole_1215 acriflavin resistance protein YP_003120845.1 PFAM: protein of unknown function DUF124; KEGG: bcb:BCB4264_A4991 hypothetical protein YP_003120846.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: swd:Swoo_1405 kynureninase YP_003120847.1 PFAM: phosphoesterase HXTX; KEGG: bcy:Bcer98_0945 hypothetical protein YP_003120848.1 PFAM: FecR protein; KEGG: psp:PSPPH_2117 FecR protein superfamily protein YP_003120849.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pla:Plav_0951 ECF subfamily RNA polymerase sigma-24 factor YP_003120850.1 KEGG: ank:AnaeK_1497 hypothetical protein YP_003120852.1 PFAM: protein of unknown function DUF1112; KEGG: sml:Smlt0986 transmembrane protein YP_003120853.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: eba:ebA3149 2-oxoglutarate ferredoxin oxidoreductase alpha subunit YP_003120855.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mes:Meso_0261 oxidoreductase-like YP_003120856.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: smt:Smal_1048 nucleoside:H symporter YP_003120857.1 KEGG: mxa:MXAN_2622 hypothetical protein YP_003120858.1 KEGG: hhe:HH1575 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003120861.1 KEGG: phosphopyruvate hydratase; K01689 enolase; TIGRFAM: enolase; PFAM: enolase YP_003120862.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4515 ABC transporter related YP_003120863.1 PFAM: stress protein; KEGG: bur:Bcep18194_B0270 stress protein YP_003120864.1 PFAM: stress protein; KEGG: eba:p1B321 tellurium resistance protein YP_003120865.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: aci:ACIAD1969 tellurium resistance protein YP_003120866.1 PFAM: haloacid dehalogenase; KEGG: rle:pRL100112 dehalogenase-hydrolase YP_003120867.1 KEGG: rle:pRL100111 hypothetical protein YP_003120868.1 PFAM: stress protein; KEGG: hso:HS_0633 stress response protein YP_003120869.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: pna:Pnap_4667 von Willebrand factor, type A YP_003120871.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: eba:p1B324 tellurium resistance protein YP_003120872.1 KEGG: eba:p1B325 hypothetical protein YP_003120873.1 KEGG: kpe:KPK_A0216 hypothetical protein YP_003120874.1 PFAM: integral membrane protein TerC; KEGG: bsu:BSU02920 hypothetical protein YP_003120875.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: cja:CJA_2848 protocatechuate dioxygenase YP_003120876.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein YP_003120877.1 PFAM: histidine kinase internal region; KEGG: sde:Sde_3001 DEAD/DEAH box helicase-like YP_003120878.1 PFAM: peptidase M23; KEGG: hpp:HPP12_1541 membrane-bound metallopeptidase YP_003120879.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mmw:Mmwyl1_2142 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003120880.1 PFAM: protein of unknown function DUF323; KEGG: bha:BH0900 transcriptional regulator (enhancement of xylanase A production) YP_003120881.1 KEGG: sfu:Sfum_4007 hypothetical protein YP_003120883.1 KEGG: sfu:Sfum_1636 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003120884.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: hypothetical protein YP_003120885.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein YP_003120887.1 PFAM: peptidase M23; KEGG: hypothetical protein YP_003120888.1 PFAM: glycosyl transferase group 1; KEGG: hypothetical protein YP_003120889.1 PFAM: peptidase M28; peptidase M20; KEGG: mxa:MXAN_0100 peptidase, M28D (aminopeptidase ES-62) subfamily YP_003120890.1 KEGG: gme:Gmet_2579 hypothetical protein YP_003120891.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_1515 uroporphyrin-III C/tetrapyrrole methyltransferase YP_003120892.1 PFAM: protein of unknown function DUF540; KEGG: pae:PA0846 sulfate transport protein CysZ YP_003120894.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_003120895.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dal:Dalk_0318 von Willebrand factor type A YP_003120896.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_003120897.1 KEGG: sun:SUN_0856 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase YP_003120898.1 KEGG: gbm:Gbem_2780 helix-turn-helix type 11 domain protein YP_003120900.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: rpi:Rpic_0704 peroxidase YP_003120901.1 PFAM: pseudouridine synthase; KEGG: sus:Acid_7265 ribosomal large subunit pseudouridine synthase D YP_003120902.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: hypothetical protein YP_003120903.1 KEGG: mxa:MXAN_3544 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003120904.1 KEGG: gme:Gmet_2058 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003120905.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mxa:MXAN_4662 RNA polymerase sigma factor YP_003120906.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: aba:Acid345_2022 excinuclease ABC subunit A YP_003120908.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: glo:Glov_1262 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase YP_003120910.1 PFAM: protein of unknown function DUF140; KEGG: gdj:Gdia_1852 protein of unknown function DUF140 YP_003120911.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_1040 ABC transporter related YP_003120912.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: nis:NIS_0839 succinyl-CoA synthase, alpha subunit YP_003120913.1 PFAM: alpha-2-macroglobulin; alpha-2- macroglobulin; KEGG: mxa:MXAN_2974 hypothetical protein YP_003120914.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003120915.1 PFAM: FAD dependent oxidoreductase; KEGG: aeh:Mlg_1501 FAD dependent oxidoreductase YP_003120916.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_003120917.1 PFAM: Mannosyl-glycoprotein endo-beta-N- acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: hypothetical protein YP_003120918.1 KEGG: scl:sce6262 hypothetical protein YP_003120919.1 KEGG: mxa:MXAN_6502 hypothetical protein YP_003120920.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: scl:sce8408 membrane-bound polysaccharide acetyltransferase YP_003120921.1 PFAM: phosphate-selective porin O and P; KEGG: acp:A2cp1_4149 phosphate-selective porin O and P YP_003120922.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: PAS/PAC sensor signal transduction histidine kinase ; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR YP_003120923.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dvm:DvMF_0882 two component transcriptional regulator, winged helix family YP_003120924.1 PFAM: protein of unknown function DUF1003; KEGG: hypothetical protein YP_003120926.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aba:Acid345_2371 ABC transporter, ATPase subunit YP_003120927.1 PFAM: transglutaminase domain protein; TPR repeat- containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce7247 hypothetical protein YP_003120928.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: mxa:MXAN_0402 ATP synthase F0, A subunit YP_003120929.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: ank:AnaeK_4475 ATP synthase F0, C subunit YP_003120930.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: yen:YE4210 F0F1 ATP synthase subunit B YP_003120931.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: dal:Dalk_3629 ATP synthase F1, delta subunit YP_003120932.1 KEGG: rce:RC1_2243 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003120933.1 PFAM: TonB-dependent receptor plug; KEGG: sus:Acid_7736 TonB-dependent receptor YP_003120934.1 KEGG: she:Shewmr4_3619 hypothetical protein YP_003120935.1 KEGG: bvi:Bcep1808_3323 MerR family transcriptional regulator YP_003120936.1 KEGG: dal:Dalk_5293 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA YP_003120937.1 KEGG: sml:Smlt0818 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase YP_003120938.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mag:amb3193 D-3-phosphoglycerate dehydrogenase YP_003120939.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: tcx:Tcr_0880 GreA/GreB family elongation factor YP_003120940.1 PFAM: histidine triad (HIT) protein; KEGG: hypothetical protein YP_003120941.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: hypothetical protein YP_003120942.1 KEGG: pha:PSHAa1877 Holliday junction nuclease; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003120943.1 KEGG: psp:PSPPH_2876 integral membrane protein YP_003120944.1 KEGG: hypothetical protein YP_003120945.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: hypothetical protein YP_003120946.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: two component transcriptional regulator, winged helix family YP_003120947.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: tdn:Suden_0316 histidine kinase YP_003120949.1 PFAM: protein of unknown function UPF0187; KEGG: bid:Bind_3402 hypothetical protein YP_003120950.1 KEGG: bpt:Bpet0901 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003120951.1 PFAM: peptidase M28; KEGG: cps:CPS_2188 M23B family peptidase YP_003120952.1 PFAM: peptidase M23; KEGG: sme:SM_b20973 hypothetical protein YP_003120953.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_003120954.1 PFAM: protein of unknown function DUF214; KEGG: sfr:Sfri_0277 protein of unknown function DUF214 YP_003120956.1 KEGG: bba:Bd2694 bacitracin resistance protein; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_003120958.1 PFAM: alanine dehydrogenase; KEGG: cvi:CV_2022 alanine dehydrogenase YP_003120959.1 PFAM: protein of unknown function UPF0079; KEGG: fph:Fphi_0546 hypothetical protein YP_003120960.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; haloacid dehalogenase; KEGG: dal:Dalk_3003 heavy metal translocating P- type ATPase YP_003120961.1 KEGG: hypothetical protein; TIGRFAM: ATP-dependent DNA helicase RecQ; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein YP_003120962.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pmu:PM0652 hypothetical protein YP_003120963.1 PFAM: protein of unknown function DUF1573; KEGG: pca:Pcar_2548 hypothetical protein YP_003120964.1 PFAM: aldo/keto reductase; KEGG: tdn:Suden_0329 oxidoreductase like protein YP_003120966.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00858 TonB-dependent receptor YP_003120968.1 PFAM: methyltransferase type 12; KEGG: conserved hypothetical protein, possible methylase YP_003120969.1 KEGG: similar to chromosome 9 open reading frame 41 YP_003120970.1 PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eba:ebA1666 fusion of ABC transporter-type transmembrane and ATP binding protein YP_003120972.1 PFAM: protein of unknown function DUF853 NPT hydrolase KEGG: lpn:lpg0269 hypothetical protein YP_003120973.1 PFAM: chaperonin Cpn10; KEGG: bsu:BSU06020 co-chaperonin GroES YP_003120974.1 PFAM: beta-lactamase domain protein; KEGG: bba:Bd2896 metal-dependent hydrolase YP_003120975.1 KEGG: bcr:BCAH187_A0507 hypothetical protein YP_003120976.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU40620 hypothetical protein YP_003120977.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_003120978.1 catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis YP_003120979.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase LpxD; transferase hexapeptide repeat containing protein; KEGG: sat:SYN_01568 UDP-3-O-[3-hydroxymyristoyl] glucosamine YP_003120980.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bha:BH3818 hypothetical protein YP_003120981.1 PFAM: response regulator receiver; PglZ domain protein; SMART: response regulator receiver; KEGG: gsu:GSU2915 sigma-54 dependent DNA-binding response regulator YP_003120983.1 PFAM: beta-lactamase domain protein; KEGG: sus:Acid_1840 beta-lactamase domain- containing protein YP_003120986.1 KEGG: EEPD1; endonuclease/exonuclease/phosphatase family domain containing 1 YP_003120987.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: aba:Acid345_2369 acyl-CoA dehydrogenase-like YP_003120988.1 PFAM: aldehyde dehydrogenase; KEGG: bmj:BMULJ_03357 NAD-dependent aldehyde dehydrogenase YP_003120992.1 KEGG: maq:Maqu_1839 ATP-dependent protease ATP- binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003120993.1 PFAM: peptidase S14 ClpP; KEGG: pol:Bpro_2030 ATP-dependent Clp protease, proteolytic subunit ClpP YP_003120994.1 TIGRFAM: trigger factor; PFAM: trigger factor domain; KEGG: gox:GOX0088 trigger factor YP_003120995.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: pen:PSEEN2606 arginase YP_003120996.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_0966 transport protein YP_003120997.1 KEGG: dps:DP0454 IAA-amino acid hydrolase [precursor]; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003120998.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator YP_003120999.1 KEGG: sus:Acid_4280 hypothetical protein YP_003121000.1 KEGG: bba:Bd1375 hypothetical protein YP_003121001.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spl:Spea_2717 AraC family transcriptional regulator YP_003121002.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: cja:CJA_0569 TonB system transport protein ExbD2 YP_003121003.1 KEGG: swd:Swoo_0390 hypothetical protein YP_003121004.1 PFAM: gamma-glutamyltranspeptidase; KEGG: sus:Acid_4698 gamma-glutamyltransferase YP_003121005.1 PFAM: TonB-dependent receptor plug; KEGG: xac:XAC2672 Oar protein YP_003121006.1 PFAM: amino acid permease-associated region; KEGG: cvi:CV_3432 amino acid permease YP_003121007.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0738 major facilitator superfamily MFS_1 YP_003121008.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_1573 EmrB/QacA family drug resistance transporter YP_003121009.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sus:Acid_0395 fis family transcriptional regulator YP_003121010.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mxa:MXAN_3659 glyoxalase family protein YP_003121011.1 KEGG: cps:CPS_4814 hypothetical protein YP_003121012.1 KEGG: mxa:MXAN_2791 protease B YP_003121013.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_1029 response regulator receiver protein YP_003121014.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: scl:sce4026 sensor histidine kinase/response regulator hybrid YP_003121015.1 PFAM: hypothetical protein; Diverse 7TM receptor extracellular region 2; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: glo:Glov_0071 integral membrane sensor signal transduction histidine kinase YP_003121017.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: scl:sce6403 hypothetical protein YP_003121019.1 PFAM: manganese and iron superoxide dismutase; KEGG: xom:XOO_2684 superoxidase dismutase YP_003121020.1 PFAM: glycosyl transferase family 39; KEGG: nis:NIS_1418 glycosyl transferase YP_003121021.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bcb:BCB4264_A4871 PAP2 family protein YP_003121022.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sat:SYN_00414 permease YP_003121024.1 PFAM: activator of Hsp90 ATPase 1 family protein YP_003121025.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 1.2; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD YP_003121026.1 KEGG: gme:Gmet_2872 signal recognition particle subunit FFH/SRP54 (SRP54); TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_003121027.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: bcy:Bcer98_2496 30S ribosomal protein S16 YP_003121028.1 TIGRFAM: 16S rRNA processing protein RimM; KEGG: dde:Dde_1097 16S rRNA processing protein RimM YP_003121029.1 KEGG: sat:SYN_00768 tRNA (guanine-N(1)-)- methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003121030.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: pca:Pcar_2219 50S ribosomal protein L19 YP_003121031.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dal:Dalk_1771 twin-arginine translocation protein, TatA/E family subunit YP_003121032.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_003121033.1 PFAM: lytic transglycosylase catalytic; KEGG: aba:Acid345_0549 lytic transglycosylase, catalytic YP_003121034.1 PFAM: sodium/hydrogen exchanger; KEGG: scl:sce2508 cation/hydrogen exchanger YP_003121035.1 KEGG: sus:Acid_6235 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_003121036.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003121037.1 KEGG: tcx:Tcr_1625 Fe-S metabolism associated SufE YP_003121038.1 PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein YP_003121039.1 KEGG: hypothetical protein YP_003121040.1 KEGG: bcy:Bcer98_0358 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003121041.1 PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003121042.1 PFAM: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; SMART: ATP-binding region ATPase domain protein; KEGG: sus:Acid_0438 cyclic nucleotide-binding protein YP_003121044.1 PFAM: alpha/beta hydrolase; KEGG: pfo:Pfl01_3998 esterase/lipase/thioesterase YP_003121045.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_3605 hypothetical protein YP_003121046.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; GAF domain protein; KEGG: sus:Acid_2052 NifA subfamily transcriptional regulator YP_003121047.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: gur:Gura_0085 two component, sigma-54 specific, fis family transcriptional regulator YP_003121048.1 KEGG: swi:Swit_5292 hypothetical protein YP_003121049.1 PFAM: OsmC family protein; KEGG: sal:Sala_2374 OsmC-like protein YP_003121050.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pat:Patl_3892 AraC family transcriptional regulator YP_003121051.1 PFAM: oxidoreductase domain protein; KEGG: aba:Acid345_4311 dehydrogenases related protein YP_003121053.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121054.1 PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR YP_003121055.1 KEGG: mca:MCA3077 ABC transporter, permease protein YP_003121056.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2644 ABC transporter, ATPase subunit YP_003121057.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bbt:BBta_3011 RNA polymerase sigma factor YP_003121060.1 PFAM: MaoC domain protein dehydratase; KEGG: hne:HNE_1169 MaoC family protein YP_003121061.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: dehydrogenase YP_003121062.1 PFAM: oxidoreductase domain protein; KEGG: mag:amb0131 dehydrogenase and related protein YP_003121063.1 PFAM: conserved hypothetical protein; KEGG: ilo:IL0119 hypothetical protein YP_003121065.1 PFAM: response regulator receiver; KEGG: sde:Sde_2630 response regulator receiver domain-containing protein YP_003121067.1 PFAM: chloride channel core; KEGG: dal:Dalk_2865 chloride channel core YP_003121068.1 PFAM: dienelactone hydrolase; KEGG: nmu:Nmul_A0914 dienelactone hydrolase YP_003121069.1 KEGG: sus:Acid_3355 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003121070.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: har:HEAR0928 response regulator receiver (Che-Y like) YP_003121071.1 KEGG: net:Neut_1863 hypothetical protein YP_003121072.1 KEGG: cvi:CV_0096 hypothetical protein YP_003121073.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bcz:BCZK0872 transcriptional regulator YP_003121074.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpt:Bpet3929 NADH dehydrogenase YP_003121076.1 KEGG: lpp:lpp2125 hypothetical protein YP_003121077.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003121078.1 PFAM: ThiJ/PfpI domain protein; KEGG: mmw:Mmwyl1_0683 ThiJ/PfpI domain-containing protein YP_003121079.1 KEGG: hypothetical protein YP_003121080.1 PFAM: fatty acid hydroxylase; KEGG: bba:Bd1729 sterol desaturase family protein YP_003121081.1 KEGG: pnu:Pnuc_0581 hypothetical protein YP_003121085.1 KEGG: scl:sce7745 hypothetical protein YP_003121086.1 PFAM: aldo/keto reductase; KEGG: aba:Acid345_2253 aldo/keto reductase YP_003121087.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003121088.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003121089.1 KEGG: pzu:PHZ_c1109 hypothetical protein YP_003121090.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase YP_003121092.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003121093.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003121095.1 KEGG: nma:NMA0246 glyceraldehyde 3-phosphate dehydrogenase C; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_003121096.1 PFAM: phosphoglycerate kinase; KEGG: hypothetical protein; K00927 phosphoglycerate kinase YP_003121097.1 PFAM: sodium:dicarboxylate symporter; KEGG: bat:BAS3380 C4-dicarboxylate transporter DctA YP_003121098.1 PFAM: histidine kinase internal region; two component regulator propeller; two component regulator three Y domain protein; KEGG: cja:CJA_2849 two-component system sensor histidine kinase/response regulator, hybrid (one-component system) YP_003121099.1 PFAM: protein of unknown function DUF477; KEGG: msu:MS1215 hypothetical protein YP_003121100.1 PFAM: protein of unknown function DUF477; KEGG: pmu:PM0784 hypothetical protein YP_003121101.1 PFAM: LemA family protein; KEGG: pmu:PM0785 hypothetical protein YP_003121102.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rfr:Rfer_1982 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_003121103.1 PFAM: FecR protein; KEGG: pap:PSPA7_2872 transmembrane sensor YP_003121105.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bha:BH3875 hypothetical protein YP_003121106.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: aba:Acid345_3977 RNA-binding S4 YP_003121107.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: hypothetical protein YP_003121109.1 PFAM: metallophosphoesterase; KEGG: afw:Anae109_3731 hypothetical protein YP_003121111.1 KEGG: sal:Sala_2169 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003121112.1 PFAM: polyphosphate kinase; KEGG: asa:ASA_1502 polyphosphate kinase YP_003121113.1 KEGG: aha:AHA_2658 hypothetical protein YP_003121114.1 KEGG: ade:Adeh_4019 hypothetical protein YP_003121115.1 PFAM: beta-lactamase domain protein; RNA- metabolising metallo-beta-lactamase; KEGG: pca:Pcar_0642 exonuclease YP_003121116.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: mxa:MXAN_0644 peptidase, M1 (aminopeptidase N) family YP_003121117.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: nis:NIS_1303 Na+-transporting oxaloacetate decarboxylase, alpha subunit YP_003121118.1 KEGG: Hypothetical protein CBG02561 YP_003121119.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_003121121.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator YP_003121122.1 KEGG: sus:Acid_7167 hypothetical protein YP_003121124.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: hypothetical protein YP_003121125.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: pla:Plav_2891 biopolymer transport protein ExbD/TolR YP_003121126.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: pat:Patl_4069 biopolymer transport protein ExbD/TolR YP_003121127.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sus:Acid_1280 TonB family protein YP_003121128.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_003121130.1 PFAM: major royal jelly protein; KEGG: gme:Gmet_2448 hypothetical protein YP_003121131.1 PFAM: major royal jelly protein; KEGG: mrd:Mrad2831_4434 hypothetical protein YP_003121132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; thioesterase; phosphopantetheine-binding; KEGG: pag:PLES_28971 PvdD(3) YP_003121133.1 PFAM: beta-lactamase; KEGG: aby:ABAYE3623 beta-lactamase VEB-1 YP_003121134.1 PFAM: lantibiotic dehydratase; KEGG: hypothetical protein YP_003121137.1 PFAM: lanthionine synthetase C family protein; KEGG: bha:BH0452 lantibiotic mersacidin modifying enzyme YP_003121138.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bcs:BCAN_A0350 two component LuxR family transcriptional regulator YP_003121139.1 KEGG: dps:DP2713 hypothetical protein YP_003121141.1 PFAM: alcohol acetyltransferase; condensation domain protein; KEGG: pau:PA14_21000 hypothetical protein YP_003121142.1 PFAM: condensation domain protein; alcohol acetyltransferase; KEGG: bam:Bamb_6240 condensation domain-containing protein YP_003121143.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: bch:Bcen2424_1765 glycosyl transferase family protein YP_003121144.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: glycosyltransferase 28 domain; UDP- glucuronosyl/UDP-glucosyltransferase; glycosyl transferase family 28; KEGG: bca:BCE_2825 glycosyltransferase YP_003121145.1 PFAM: alpha/beta hydrolase; KEGG: ppf:Pput_2891 alpha/beta hydrolase YP_003121147.1 PFAM: beta-ketoacyl synthase; 4'- phosphopantetheinyl transferase; KEGG: sus:Acid_1973 beta-ketoacyl synthase YP_003121148.1 PFAM: beta-ketoacyl synthase; acyl transferase; KR domain protein; short-chain dehydrogenase/reductase SDR; 2- nitropropane dioxygenase NPD; KEGG: sus:Acid_1972 beta-ketoacyl synthase YP_003121149.1 KEGG: dac:Daci_4021 hypothetical protein YP_003121150.1 KEGG: xau:Xaut_0226 hypothetical protein YP_003121151.1 KEGG: gur:Gura_4116 hypothetical protein YP_003121152.1 PFAM: protein of unknown function DUF524; KEGG: swd:Swoo_4917 hypothetical protein YP_003121153.1 PFAM: aldo/keto reductase; KEGG: bha:BH1011 oxidoreductase YP_003121154.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: ilo:IL0916 carboxyl-terminal protease YP_003121155.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: saz:Sama_0293 alpha-1,2-mannosidase YP_003121156.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: smt:Smal_0115 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_003121158.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121159.1 KEGG: hypothetical protein YP_003121160.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bba:Bd0506 short-chain dehydrogenase/reductase YP_003121161.1 KEGG: ccs:CCNA_00575 hypothetical protein YP_003121162.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator YP_003121163.1 KEGG: hypothetical protein YP_003121164.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: aba:Acid345_1701 galactokinase YP_003121165.1 KEGG: aba:Acid345_1703 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_003121166.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bpt:Bpet4645 TonB-dependent outer membrane receptor YP_003121167.1 PFAM: NHL repeat containing protein; KEGG: psa:PST_1093 L-sorbosone dehydrogenase YP_003121168.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sus:Acid_1280 TonB family protein YP_003121169.1 KEGG: phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase YP_003121170.1 KEGG: apl:APL_1618 urease subunit gamma; TIGRFAM: urease, gamma subunit; PFAM: urease gamma subunit region YP_003121171.1 KEGG: hac:Hac_1532 bifunctional urease subunit gamma/beta; TIGRFAM: urease, beta subunit; PFAM: urease beta subunit YP_003121172.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_003121173.1 involved in the assembly of the urease metallocenter; possible nickel donor YP_003121174.1 PFAM: urease accessory protein UreF; KEGG: apa:APP7_1675 urease accessory protein UreF YP_003121175.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: hiq:CGSHiGG_05935 urease accessory protein YP_003121176.1 PFAM: urease accessory protein UreD; KEGG: apj:APJL_1644 urease accessory protein UreH YP_003121177.1 KEGG: ccs:CCNA_00322 hypothetical protein YP_003121178.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bsu:BSU23860 6-phosphogluconate dehydrogenase YP_003121179.1 KEGG: ppd:Ppro_2250 glucose-6-phosphate 1- dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003121180.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: gme:Gmet_2618 6-phosphogluconolactonase YP_003121181.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: sus:Acid_7109 alpha-L-fucosidase YP_003121182.1 KEGG: gsu:GSU3219 fibronectin type III domain- containing protein YP_003121183.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: pat:Patl_1434 ferredoxin-dependent glutamate synthase YP_003121184.1 PFAM: mechanosensitive ion channel MscS; KEGG: amc:MADE_01752 mechanosensitive channel protein (MscS family) YP_003121185.1 PFAM: glycoside hydrolase, family 20, catalytic core; glycoside hydrolase family 20 domain protein; beta-N- acetylhexosaminidase-like; KEGG: hch:HCH_04791 N-acetyl-beta-hexosaminidase YP_003121186.1 PFAM: UspA domain protein; KEGG: dvm:DvMF_0804 UspA domain protein YP_003121187.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: bat:BAS1375 virulence factor MprF YP_003121188.1 PFAM: virulence factor family protein; KEGG: pae:PA0919 hypothetical protein YP_003121189.1 KEGG: gur:Gura_3403 transcriptional regulator-like protein YP_003121191.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: aba:Acid345_4290 two component transcriptional regulator, LuxR family YP_003121192.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121193.1 PFAM: RagB/SusD domain protein YP_003121194.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; KEGG: yen:YE2476 hypothetical protein YP_003121195.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hap:HAPS_1638 transcriptional regulator, AraC family YP_003121197.1 KEGG: hypothetical protein; K09527 DnaJ homolog, subfamily C, member 7 YP_003121198.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bbr:BB2692 hypothetical protein YP_003121199.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate YP_003121200.1 PFAM: MOFRL domain protein; KEGG: dal:Dalk_0946 hydroxypyruvate reductase YP_003121201.1 KEGG: aba:Acid345_0010 hypothetical protein YP_003121202.1 PFAM: amidohydrolase; amidohydrolase; KEGG: ilo:IL1717 amidohydrolase-like domain- containing protein YP_003121203.1 KEGG: ilo:IL1716 amidohydrolase YP_003121204.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: mxa:MXAN_0453 general stress protein 26 YP_003121205.1 KEGG: acp:A2cp1_1171 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003121207.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; NAD- dependent epimerase/dehydratase; KEGG: fph:Fphi_1252 dTDP-4-dehydrorhamnose reductase YP_003121208.1 KEGG: eci:UTI89_C2309 dTDP-4-dehydrorhamnose 3,5- epimerase (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP- L-rhamnose synthetase); TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003121209.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dTDP-glucose 4,6-dehydratase YP_003121210.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: sus:Acid_1371 NAD-dependent epimerase/dehydratase YP_003121211.1 KEGG: mxa:MXAN_1048 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase YP_003121212.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: msu:MS1498 WecE protein YP_003121213.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mxa:MXAN_4714 3-deoxy-D-manno-octulosonic- acid transferase YP_003121214.1 KEGG: atc:AGR_C_2517 hypothetical protein YP_003121215.1 PFAM: thymidine kinase; KEGG: hypothetical protein YP_003121216.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl01_5342 AraC family transcriptional regulator YP_003121217.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pol:Bpro_5550 NADH:flavin oxidoreductase/NADH oxidase YP_003121218.1 KEGG: pne:Pnec_0338 GtrA family protein YP_003121219.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase; carbamoyl-phosphate synthetase large chain domain protein; KEGG: mxa:MXAN_1111 propionyl-CoA carboxylase, alpha subunit YP_003121220.1 PFAM: cytochrome C biogenesis protein CcmB; ABC-2 type transporter; KEGG: mxa:MXAN_3257 heme exporter protein CcmB YP_003121221.1 PFAM: cytochrome C assembly protein; KEGG: mxa:MXAN_3256 heme exporter protein CcmC YP_003121223.1 PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: NAD-dependent glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) YP_003121224.1 KEGG: bca:BCE_0838 hypothetical protein YP_003121225.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile YP_003121226.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bba:Bd1221 ABC-type dipeptide transport system, ATPase component YP_003121227.1 TIGRFAM:S-adenosylmethionine/tRNA- ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; KEGG: bcb:BCB4264_A4537 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_003121228.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers YP_003121229.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: dol:Dole_2838 oxidoreductase domain- containing protein YP_003121230.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: glo:Glov_0523 DNA repair protein RadC YP_003121231.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_003121232.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: acp:A2cp1_0138 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 YP_003121233.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_003121234.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: glo:Glov_3591 5-oxopent-3-ene-1,2,5- tricarboxylate decarboxylase YP_003121235.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcz:pE33L466_0360 MarR family transcriptional regulator YP_003121236.1 PFAM: transketolase central region; transketolase domain protein; dehydrogenase E1 component; KEGG: sus:Acid_3687 dehydrogenase, E1 component YP_003121237.1 KEGG: smt:Smal_3824 hypothetical protein YP_003121238.1 KEGG: smt:Smal_3824 hypothetical protein YP_003121241.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sit:TM1040_3368 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway)-like YP_003121242.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein YP_003121243.1 KEGG: bcb:BCB4264_A0932 pyruvyl-transferase YP_003121244.1 KEGG: bra:BRADO3469 hypothetical protein YP_003121245.1 KEGG: scl:sce5390 hypothetical protein YP_003121246.1 KEGG: cco:CCC13826_1005 hypothetical protein YP_003121247.1 KEGG: sdn:Sden_1211 hypothetical protein YP_003121248.1 PFAM: RagB/SusD domain protein YP_003121249.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121252.1 KEGG: ppg:PputGB1_4079 hypothetical protein YP_003121253.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: lpf:lpl2571 transmission activator LetA YP_003121254.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ank:AnaeK_1880 integral membrane sensor signal transduction histidine kinase YP_003121257.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bcr:BCAH187_E0055 peptidase C14 caspase catalytic subunit P20 YP_003121258.1 PFAM: protein of unknown function DUF323; KEGG: hch:HCH_03025 hypothetical protein YP_003121259.1 PFAM: protein of unknown function DUF1508; KEGG: maq:Maqu_0417 hypothetical protein YP_003121261.1 KEGG: scl:sce4731 hypothetical protein YP_003121262.1 KEGG: spe:Spro_0109 hypothetical protein YP_003121263.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: VIT1; VIT1 (VACUOLAR IRON TRANSPORTER 1); iron ion transmembrane transporter YP_003121264.1 KEGG: mxa:MXAN_1191 hypothetical protein YP_003121265.1 KEGG: dar:Daro_3715 twin-arginine translocation pathway signal YP_003121266.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_003121267.1 PFAM: protein of unknown function DUF350; KEGG: aba:Acid345_0110 protein of unknown function DUF350 YP_003121269.1 KEGG: dar:Daro_3751 hypothetical protein YP_003121270.1 PFAM: S-adenosylmethionine decarboxylase; KEGG: net:Neut_2465 S-adenosylmethionine decarboxylase-related protein YP_003121271.1 PFAM: YiaAB two helix domain protein; KEGG: bur:Bcep18194_A3880 YiaAB two helix membrane protein YP_003121272.1 KEGG: cps:CPS_2775 hypothetical protein YP_003121273.1 PFAM: peptidase T2 asparaginase 2; KEGG: ecm:EcSMS35_1111 asparaginase family protein YP_003121274.1 KEGG: sus:Acid_0267 hypothetical protein YP_003121275.1 PFAM: glycosyl hydrolase family 88; KEGG: aba:Acid345_0962 glycosyl hydrolase, family 88 YP_003121276.1 PFAM: propeptide PepSY amd peptidase M4; PepSY- associated TM helix domain protein; KEGG: pfl:PFL_0863 iron-uptake factor YP_003121277.1 PFAM: Domain of unknown function DUF1793; KEGG: sus:Acid_2314 glutaminase YP_003121280.1 PFAM: protein of unknown function DUF303 acetylesterase KEGG: sus:Acid_3201 sialate O-acetylesterase YP_003121281.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: azc:AZC_4597 integral membrane protein precursor YP_003121284.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: eba:ebA4517 RNA polymerase sigma factor (sigma24) YP_003121285.1 PFAM: FecR protein; KEGG: sde:Sde_1443 transcriptional regulator YP_003121286.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121287.1 PFAM: RagB/SusD domain protein YP_003121289.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein YP_003121290.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: rpe:RPE_0442 excinuclease ABC, C subunit domain protein YP_003121292.1 KEGG: sfr:Sfri_1232 hypothetical protein YP_003121293.1 KEGG: saz:Sama_1681 lipoprotein YP_003121294.1 PFAM: ApbE family lipoprotein; KEGG: tgr:Tgr7_0552 ApbE family lipoprotein YP_003121295.1 KEGG: rpb:RPB_4360 thiol:disulfide interchange protein YP_003121296.1 PFAM: mechanosensitive ion channel MscS; KEGG: aba:Acid345_0914 MscS mechanosensitive ion channel YP_003121297.1 PFAM: nitroreductase; KEGG: hypothetical protein YP_003121298.1 KEGG: aeh:Mlg_1456 esterase YP_003121299.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: dps:DP0707 hypothetical protein YP_003121301.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: glo:Glov_2638 branched-chain amino acid aminotransferase YP_003121302.1 KEGG: nha:Nham_2274 hypothetical protein YP_003121303.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: bch:Bcen2424_0343 30S ribosomal protein S12 YP_003121304.1 TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: afw:Anae109_1908 30S ribosomal protein S7 YP_003121305.1 PFAM: Collagen triple helix repeat; KEGG: bcb:BCB4264_A3811 collagen triple helix repeat protein YP_003121306.1 KEGG: similar to atrophin-1 like protein YP_003121309.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: glo:Glov_1343 translation elongation factor G YP_003121310.1 KEGG: ngk:NGK_0365 outer membrane protein YP_003121311.1 TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: sus:Acid_5119 30S ribosomal protein S10 YP_003121312.1 PFAM: ribosomal protein L3; KEGG: hypothetical protein YP_003121313.1 PFAM: ribosomal protein L4/L1e; KEGG: hypothetical protein YP_003121314.1 PFAM: ribosomal protein L25/L23; KEGG: mxa:MXAN_3301 50S ribosomal protein L23 YP_003121315.1 TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: gur:Gura_1070 50S ribosomal protein L2 YP_003121316.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: ank:AnaeK_1937 ribosomal protein S19 YP_003121317.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: asa:ASA_4082 ribosomal protein L22 YP_003121318.1 KEGG: mch:Mchl_2446 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein YP_003121319.1 TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: pla:Plav_2743 50S ribosomal protein L16 YP_003121320.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: dvu:DVU1311 50S ribosomal protein L29 YP_003121321.1 PFAM: ribosomal protein S17; KEGG: vpa:VP0266 ribosomal protein S17 YP_003121322.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: bcy:Bcer98_0114 50S ribosomal protein L14 YP_003121323.1 TIGRFAM: ribosomal protein L24; KEGG: bha:BH0145 50S ribosomal protein L24 YP_003121324.1 PFAM: ribosomal protein L5; KEGG: bsu:BSU01280 50S ribosomal protein L5 YP_003121325.1 PFAM: ribosomal protein S14; KEGG: bsu:BSU08880 30S ribosomal protein S14 YP_003121326.1 PFAM: ribosomal protein S8; KEGG: bha:BH0148 30S ribosomal protein S8 YP_003121327.1 PFAM: ribosomal protein L6; KEGG: bcu:BCAH820_0137 ribosomal protein L6 YP_003121328.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: mno:Mnod_1924 ribosomal protein L18 YP_003121329.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5; ribosomal protein S5 domain protein; KEGG: gsu:GSU2840 30S ribosomal protein S5 YP_003121330.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: pin:Ping_3506 ribosomal protein L30 YP_003121331.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: ppd:Ppro_0699 50S ribosomal protein L15 YP_003121332.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_003121333.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bha:BH0156 methionine aminopeptidase YP_003121334.1 TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: bha:BH0158 translation initiation factor IF-1 YP_003121335.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: rru:Rru_A2467 50S ribosomal protein L36P YP_003121336.1 PFAM: ribosomal protein S13; KEGG: sfu:Sfum_1579 30S ribosomal protein S13 YP_003121337.1 PFAM: ribosomal protein S11; KEGG: bha:BH0161 30S ribosomal protein S11 YP_003121338.1 KEGG: mca:MCA2348 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003121339.1 KEGG: rru:Rru_A2664 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003121340.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: ajs:Ajs_0407 50S ribosomal protein L17P YP_003121342.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_003121343.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_003121344.1 PFAM: protein of unknown function DUF1573; KEGG: gur:Gura_3399 hypothetical protein YP_003121345.1 PFAM: transketolase domain protein; dehydrogenase E1 component; transketolase central region; KEGG: hypothetical protein YP_003121346.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcy:Bcer98_0802 two component transcriptional regulator YP_003121347.1 PFAM: protein of unknown function DUF28; KEGG: afw:Anae109_1612 hypothetical protein YP_003121348.1 PFAM: amino acid permease-associated region; KEGG: sus:Acid_4944 amino acid permease-associated region YP_003121349.1 PFAM: sodium:dicarboxylate symporter; KEGG: aha:AHA_2605 proton/sodium-glutamate symport protein YP_003121350.1 PFAM: hypothetical protein; KEGG: scl:sce6413 hypothetical protein YP_003121351.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: gbm:Gbem_2478 major facilitator superfamily MFS_1 YP_003121352.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: aba:Acid345_2954 transcriptional regulator, MarR family YP_003121353.1 KEGG: dal:Dalk_0818 malate dehydrogenase, NAD- dependent; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_003121354.1 KEGG: abu:Abu_1448 lipoprotein thiredoxin YP_003121355.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; KEGG: bcy:Bcer98_2891 elongation factor P YP_003121356.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bha:BH2788 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_003121357.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; carbamoyl- phosphate synthetase large chain domain protein; KEGG: glo:Glov_1598 acetyl-CoA carboxylase, biotin carboxylase YP_003121359.1 PFAM: glutamine synthetase catalytic region; KEGG: gbm:Gbem_3079 glutamine synthetase catalytic region YP_003121360.1 KEGG: bce:BC0329 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003121361.1 PFAM: aminotransferase class I and II; KEGG: hch:HCH_06031 7-keto-8-aminopelargonate synthetase and related enzyme YP_003121362.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: sus:Acid_0822 type I phosphodiesterase/nucleotide pyrophosphatase YP_003121363.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: aba:Acid345_1426 enoyl-CoA hydratase/isomerase YP_003121366.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein YP_003121367.1 PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: (2r)-phospho-3-sulfolactate synthase; K01767 YP_003121368.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: bja:bll1059 shikimate 5-dehydrogenase YP_003121369.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: rlt:Rleg2_0420 methyltransferase type 11 YP_003121370.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: hypothetical protein; K03177 tRNA pseudouridine synthase B YP_003121371.1 PFAM: surface antigen (D15); KEGG: gur:Gura_3237 surface antigen (D15) YP_003121372.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: vpa:VP0954 RNA methyltransferase YP_003121373.1 PFAM: protein of unknown function DUF214; KEGG: dds:Ddes_0613 lipoprotein releasing system, transmembrane protein, LolC/E family YP_003121375.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A2001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003121376.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_003121377.1 KEGG: hypothetical protein YP_003121378.1 PFAM: RDD domain containing protein; KEGG: scl:sce0130 hypothetical protein YP_003121379.1 PFAM: RDD domain containing protein; KEGG: hch:HCH_00261 hypothetical protein YP_003121380.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: bha:BH0733 hypothetical protein YP_003121381.1 KEGG: mxa:MXAN_2477 hypothetical protein YP_003121382.1 KEGG: hypothetical protein YP_003121383.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bce:BC2117 MoxR protein YP_003121384.1 PFAM: protein of unknown function DUF58; KEGG: pfl:PFL_4794 hypothetical protein YP_003121387.1 PFAM: helix-turn-helix HxlR type; KEGG: ban:BA3457 hypothetical protein YP_003121388.1 KEGG: sus:Acid_3038 hypothetical protein YP_003121389.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mms:mma_0547 acyl carrier protein phosphodiesterase YP_003121391.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003121392.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bba:Bd2156 2-nitropropane dioxygenase YP_003121393.1 KEGG: hap:HAPS_1135 riboflavin synthase subunit alpha; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein YP_003121394.1 TIGRFAM: ribosomal protein S21; KEGG: mxa:MXAN_5201 30S ribosomal protein S21 YP_003121395.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: tyrosine recombinase XerC; K03733 integrase/recombinase XerC YP_003121396.1 KEGG: vpa:VP2671 sigma-54 modulation protein YP_003121397.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: bmu:Bmul_0247 elongation factor Tu YP_003121398.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: saz:Sama_0200 preprotein translocase subunit SecE YP_003121399.1 KEGG: bcs:BCAN_A1271 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein YP_003121400.1 KEGG: hypothetical protein YP_003121401.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: predicted protein YP_003121403.1 KEGG: dds:Ddes_1632 ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11 YP_003121404.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_003121405.1 PFAM: ribosomal protein L10; KEGG: pzu:PHZ_c1216 50S ribosomal protein L10 YP_003121406.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_003121407.1 KEGG: DNA-directed RNA polymerase, beta subunit; K03043 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit YP_003121408.1 KEGG: gbm:Gbem_0927 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_003121409.1 KEGG: aba:Acid345_4137 hypothetical protein YP_003121410.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: mxa:MXAN_4727 outer membrane protein, OmpH family YP_003121411.1 PFAM: amino acid permease-associated region; KEGG: sus:Acid_4943 amino acid permease-associated region YP_003121412.1 PFAM: FecR protein; KEGG: pat:Patl_1521 FecR YP_003121413.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_0272 TonB-dependent receptor YP_003121414.1 KEGG: scl:sce5067 hypothetical protein YP_003121416.1 PFAM: peptidase S41; KEGG: scl:sce0169 peptidase YP_003121417.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor YP_003121418.1 KEGG: dvu:DVU1886 hypothetical protein YP_003121419.1 PFAM: glycosyl transferase family 9; KEGG: dde:Dde_1629 heptosyltransferase family protein YP_003121420.1 PFAM: thioesterase superfamily protein; KEGG: pag:PLES_04451 long-chain acyl-CoA thioester hydrolase family protein YP_003121421.1 KEGG: scl:sce7770 hypothetical protein YP_003121422.1 PFAM: integral membrane protein TerC; KEGG: gme:Gmet_1782 integral membrane protein TerC YP_003121423.1 KEGG: dps:DP0077 hypothetical protein YP_003121424.1 PFAM: haloacid dehalogenase; KEGG: hypothetical protein YP_003121425.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_6519 hypothetical protein YP_003121426.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_5559 alpha-L-rhamnosidase YP_003121427.1 PFAM: peptidase S24 and S26 domain protein; KEGG: scl:sce5277 hypothetical protein YP_003121428.1 KEGG: pca:Pcar_3022 hypothetical protein YP_003121429.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rfr:Rfer_0894 two component LuxR family transcriptional regulator YP_003121430.1 KEGG: dol:Dole_0030 ATPase domain-containing protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; hypothetical protein YP_003121431.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121435.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; Parallel beta- helix repeat; KEGG: hypothetical protein YP_003121436.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: hypothetical protein YP_003121438.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: xop:PXO_02523 OmpA family outer membrane protein YP_003121440.1 KEGG: rfr:Rfer_4079 hypothetical protein YP_003121441.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: sus:Acid_5149 alpha-1,2-mannosidase YP_003121442.1 SMART: regulatory protein ArsR; KEGG: pau:PA14_14310 transcriptional regulator YP_003121443.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: amc:MADE_00206 diaminopimelate decarboxylase YP_003121444.1 KEGG: ccv:CCV52592_1800 riboflavin biosynthesis protein YP_003121445.1 KEGG: dal:Dalk_0746 hypothetical protein YP_003121446.1 PFAM: protein of unknown function DUF1349; KEGG: sme:SM_b20675 hypothetical protein YP_003121447.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003121448.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 43; KEGG: sde:Sde_0598 alpha-L-arabinofuranosidase YP_003121449.1 KEGG: scl:sce5344 no similarity YP_003121450.1 PFAM: metallophosphoesterase; KEGG: mxa:MXAN_1509 Ser/Thr protein phosphatase family protein YP_003121451.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: hch:HCH_01981 pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzyme YP_003121452.1 KEGG: bur:Bcep18194_C6673 hypothetical protein YP_003121453.1 KEGG: swd:Swoo_2283 hypothetical protein YP_003121454.1 KEGG: mxa:MXAN_2366 lipoprotein YP_003121455.1 KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003121456.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_6587 short-chain dehydrogenase/reductase SDR YP_003121457.1 KEGG: bcr:BCAH187_A1243 hypothetical protein YP_003121459.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: lpp:plpp0081 hypothetical protein YP_003121460.1 KEGG: aba:Acid345_4418 hypothetical protein YP_003121462.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_2097 hypothetical protein YP_003121463.1 KEGG: bsu:BSU12260 hypothetical protein YP_003121464.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003121465.1 PFAM: NmrA family protein; KEGG: rru:Rru_A2334 nucleoside-diphosphate-sugar epimerase YP_003121466.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_2395 glyoxalase family protein YP_003121467.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein YP_003121469.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pat:Patl_1909 AraC family transcriptional regulator YP_003121470.1 PFAM: outer membrane efflux protein; KEGG: pol:Bpro_5561 outer membrane efflux protein YP_003121471.1 PFAM: secretion protein HlyD family protein; KEGG: mca:MCA2257 HlyD family secretion protein YP_003121472.1 KEGG: glo:Glov_1631 drug resistance transporter, EmrB/QacA subfamily YP_003121474.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121475.1 PFAM: RagB/SusD domain protein YP_003121476.1 PFAM: carbohydrate-binding protein; beta-Ig- H3/fasciclin; SMART: cellulose binding type IV; KEGG: sde:Sde_1393 thiol oxidoreductase-like YP_003121478.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121479.1 PFAM: RagB/SusD domain protein YP_003121481.1 KEGG: glo:Glov_1449 hypothetical protein YP_003121482.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: ppf:Pput_1007 hypothetical protein YP_003121483.1 KEGG: cps:CPS_2654 PKD domain-containing protein YP_003121484.1 KEGG: pau:PA14_26165 hypothetical protein YP_003121485.1 KEGG: sun:SUN_0739 hypothetical protein YP_003121486.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: cti:RALTA_A1478 conserved hypothetical protein, high-affinity ADP-ribose binding domain YP_003121487.1 KEGG: vei:Veis_0526 hypothetical protein YP_003121488.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sfu:Sfum_2731 response regulator receiver protein YP_003121489.1 KEGG: Hypothetical protein CBG09235 YP_003121492.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pha:PSHAb0030 AraC-like transcription regulator YP_003121493.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver; KEGG: cvi:CV_2213 sensor histidine kinase/response regulator YP_003121494.1 PFAM: terpene synthase metal-binding domain protein; KEGG: scl:sce6369 pentalenene synthase YP_003121495.1 PFAM: glycoside hydrolase, family 20, catalytic core; beta-N-acetylhexosaminidase-like; KEGG: cps:CPS_3960 beta-hexosaminidase YP_003121496.1 KEGG: bba:Bd1449 cell wall surface anchor family protein YP_003121497.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121498.1 PFAM: RagB/SusD domain protein YP_003121499.1 KEGG: sde:Sde_2311 hypothetical protein YP_003121500.1 KEGG: cvi:CV_0707 hypothetical protein YP_003121501.1 KEGG: atc:AGR_L_146 hypothetical protein YP_003121502.1 KEGG: sus:Acid_1249 pectinesterase YP_003121503.1 KEGG: sde:Sde_2315 hypothetical protein YP_003121504.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_5559 alpha-L-rhamnosidase YP_003121505.1 PFAM: xylose isomerase; KEGG: sus:Acid_2595 xylose isomerase domain- containing protein YP_003121506.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: nar:Saro_1727 glycoside hydrolase family protein YP_003121507.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sus:Acid_4901 glycoside hydrolase family protein YP_003121508.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein YP_003121509.1 PFAM: pectinesterase; KEGG: xcb:XC_0125 pectin methylesterase-like protein YP_003121510.1 KEGG: hypothetical protein YP_003121511.1 KEGG: ypb:YPTS_1818 hypothetical protein YP_003121513.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: sal:Sala_1014 glycoside hydrolase family protein YP_003121514.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_003121515.1 KEGG: ypm:YP_1437 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase YP_003121516.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: hypothetical protein YP_003121517.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate YP_003121519.1 PFAM: chorismate binding-like; anthranilate synthase component I domain protein; KEGG: sat:SYN_01947 anthranilate synthase component I YP_003121520.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: msu:MS2194 para-aminobenzoate synthase component II YP_003121521.1 KEGG: anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003121522.1 PFAM: indole-3-glycerol phosphate synthase; KEGG: pmy:Pmen_3944 indole-3-glycerol-phosphate synthase YP_003121523.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: hypothetical protein; K01817 phosphoribosylanthranilate isomerase YP_003121524.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_003121525.1 KEGG: xfa:XF1376 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_003121526.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: fph:Fphi_0065 imidazole glycerol phosphate synthase subunit HisH YP_003121527.1 KEGG: hypothetical protein; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; GCN5-related N-acetyltransferase YP_003121528.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: bha:BH3578 imidazole glycerol phosphate synthase subunit HisF YP_003121529.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: fph:Fphi_0062 phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase YP_003121530.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein YP_003121531.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003121532.1 PFAM: Penicillinase repressor; KEGG: rde:RD1_4115 transcriptional regulator YP_003121533.1 PFAM: peptidase M56 BlaR1; KEGG: cak:Caul_3733 peptidase M56 BlaR1 YP_003121534.1 PFAM: protein of unknown function DUF323; KEGG: reu:Reut_B4568 hypothetical protein YP_003121535.1 KEGG: rfr:Rfer_1111 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_003121538.1 PFAM: Kelch repeat-containing protein; KEGG: hypothetical protein LOC100013485; K10443 kelch-like protein 2/3 YP_003121540.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_1132 signal transduction histidine kinase, LytS YP_003121541.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein YP_003121542.1 PFAM: aminotransferase class V; KEGG: hypothetical protein YP_003121544.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: phosphoglucomutase/phosphomannomutase family protein; K01840 phosphomannomutase YP_003121545.1 PFAM: sulfatase; KEGG: abo:ABO_1110 phosphoglycerol transferase YP_003121546.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: scl:sce9032 methyltransferase YP_003121547.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bba:Bd0143 phosphatase YP_003121548.1 PFAM: zinc/iron permease; KEGG: mxa:MXAN_5682 metal cation transporter, zinc (Zn2+)-iron (Fe2+) permease (ZIP) family YP_003121549.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: sfu:Sfum_4050 protein of unknown function DUF21 YP_003121550.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bcy:Bcer98_2312 histidine ammonia-lyase YP_003121551.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein YP_003121552.1 PFAM: beta-ketoacyl synthase; KEGG: pca:Pcar_2666 3-oxoacyl-(acyl-carrier- protein) synthase I YP_003121553.1 KEGG: ppd:Ppro_0908 phosphopantetheine-binding protein YP_003121554.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: saz:Sama_3384 glycosyl transferase, group 2 family protein YP_003121555.1 KEGG: ppd:Ppro_0911 radical SAM domain-containing protein YP_003121556.1 KEGG: hypothetical protein YP_003121557.1 PFAM: thioesterase superfamily protein; KEGG: pca:Pcar_2654 thioesterase YP_003121558.1 PFAM: beta-ketoacyl synthase; KEGG: vfi:VF_0857 3-oxoacyl-(acyl carrier protein) synthase I YP_003121559.1 PFAM: methyltransferase type 12; O- methyltransferase family 2; methyltransferase type 11; KEGG: spl:Spea_1680 O-methyltransferase YP_003121560.1 PFAM: tryptophan halogenase; monooxygenase FAD- binding; FAD dependent oxidoreductase; KEGG: shw:Sputw3181_0290 monooxygenase, FAD-binding YP_003121561.1 KEGG: dps:DP1854 hypothetical protein YP_003121562.1 PFAM: phosphopantetheine-binding; KEGG: ppd:Ppro_0923 acyl-carrier protein-like protein YP_003121563.1 PFAM: beta-ketoacyl synthase; KEGG: ppd:Ppro_0926 beta-ketoacyl synthase YP_003121564.1 PFAM: beta-ketoacyl synthase; KEGG: gur:Gura_3605 beta-ketoacyl synthase YP_003121565.1 PFAM: polysaccharide deacetylase; KEGG: scl:sce8406 acetylxylan esterase YP_003121566.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: ppd:Ppro_0912 outer membrane lipoprotein carrier protein LolA YP_003121568.1 KEGG: azo:azo0259 hypothetical protein YP_003121569.1 PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_2653 glycosyltransferase YP_003121570.1 PFAM: phospholipid/glycerol acyltransferase; methyltransferase type 11; methyltransferase type 12; SMART: phospholipid/glycerol acyltransferase; KEGG: pca:Pcar_2657 exporter YP_003121571.1 PFAM: FAD dependent oxidoreductase; KEGG: dps:DP1860 hypothetical protein YP_003121572.1 PFAM: peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase; KEGG: scl:sce6990 hypothetical protein YP_003121573.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: gur:Gura_2322 holo-acyl-carrier-protein synthase YP_003121574.1 KEGG: ppd:Ppro_0910 coenzyme F390 synthetase-like protein YP_003121575.1 KEGG: pha:PSHAb0058 orphan protein YP_003121576.1 KEGG: rma:Rmag_0157 hypothetical protein YP_003121577.1 KEGG: cps:CPS_0411 aminopeptidase YP_003121578.1 KEGG: xac:XAC1234 hypothetical protein YP_003121579.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: cps:CPS_3456 SPFH domain-containing protein/band 7 family protein YP_003121580.1 PFAM: esterase; KEGG: bpy:Bphyt_5901 esterase YP_003121581.1 KEGG: mxa:MXAN_4170 lipoprotein YP_003121582.1 KEGG: hypothetical protein YP_003121583.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121585.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121586.1 PFAM: FecR protein; KEGG: xau:Xaut_2778 anti-FecI sigma factor, FecR YP_003121587.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: pfl:PFL_0173 RNA polymerase sigma factor YP_003121588.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: transcriptional regulator (AraC/XylS family) YP_003121589.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bcz:pE33L466_0296 degradation activator YP_003121590.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: hypothetical protein YP_003121592.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sus:Acid_2372 redoxin domain-containing protein YP_003121593.1 KEGG: sus:Acid_2373 calcium-binding EF-hand- containing protein YP_003121594.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121595.1 KEGG: hypothetical protein YP_003121596.1 KEGG: sus:Acid_3914 hypothetical protein YP_003121597.1 This protein performs the mismatch recognition step during the DNA repair process YP_003121598.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bba:Bd1732 tRNA/rRNA methyltransferase YP_003121599.1 TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: sus:Acid_1310 4-hydroxybenzoate polyprenyltransferase YP_003121600.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: sus:Acid_7012 Holliday junction resolvase YqgF YP_003121601.1 KEGG: hypothetical protein; K01462; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003121602.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily YP_003121603.1 KEGG: aba:Acid345_0544 hypothetical protein YP_003121604.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily YP_003121605.1 KEGG: aba:Acid345_0544 hypothetical protein YP_003121608.1 KEGG: gur:Gura_0881 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003121609.1 KEGG: hypothetical protein; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_003121611.1 KEGG: asa:ASA_3948 1-aminocyclopropane-1- carboxylate deaminase YP_003121612.1 KEGG: ccs:CCNA_00456 beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 20, catalytic core; PA14 domain protein; SMART: PA14 domain protein YP_003121613.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: sus:Acid_4210 alpha-L-fucosidase YP_003121614.1 KEGG: dal:Dalk_1694 hypothetical protein YP_003121616.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: dar:Daro_3294 branched-chain amino acid aminotransferase YP_003121617.1 KEGG: pin:Ping_2151 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003121618.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: ftn:FTN_1042 acetolactate synthase large subunit YP_003121619.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: sfu:Sfum_3025 acetolactate synthase, small subunit YP_003121620.1 KEGG: dal:Dalk_0563 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003121621.1 TIGRFAM: threonine dehydratase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; threonine dehydratase domain protein; KEGG: bcy:Bcer98_1447 threonine dehydratase YP_003121622.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: maq:Maqu_0510 alcohol dehydrogenase YP_003121623.1 PFAM: FAD dependent oxidoreductase; KEGG: hypothetical protein YP_003121624.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: vfm:VFMJ11_A0389 sodium/glucose cotransporter YP_003121625.1 PFAM: carbohydrate kinase FGGY; KEGG: cja:CJA_3062 xylulose kinase (xylulokinase) YP_003121626.1 catalyzes the interconversion of D-xylose to D-xylulose YP_003121627.1 PFAM: aldose 1-epimerase; KEGG: vsp:VS_II1385 galactose mutarotase and related enzymes YP_003121628.1 PFAM: CsbD family protein; KEGG: par:Psyc_0156 hypothetical protein YP_003121629.1 KEGG: dar:Daro_2056 hypothetical protein YP_003121631.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rpt:Rpal_2705 peptidase S1 and S6 chymotrypsin/Hap YP_003121632.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: aha:AHA_4110 ECF subfamily RNA polymerase sigma factor YP_003121633.1 KEGG: GH10507 gene product from transcript GH10507- RA YP_003121634.1 PFAM: prephenate dehydratase; KEGG: mgm:Mmc1_1881 prephenate dehydratase YP_003121635.1 PFAM: aminotransferase class I and II; KEGG: dvm:DvMF_0361 aminotransferase class I and II YP_003121636.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_003121637.1 PFAM: DAHP synthetase I/KDSA; chorismate mutase; KEGG: sdn:Sden_0622 DAHP synthetase I/KdsA YP_003121638.1 KEGG: dal:Dalk_1432 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003121639.1 TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); KEGG: kpn:KPN_00936 3-phosphoshikimate 1- carboxyvinyltransferase YP_003121640.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_003121641.1 PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: noc:Noc_1219 peptidylprolyl isomerase YP_003121642.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: sus:Acid_0830 peptidase S15 YP_003121643.1 PFAM: protein of unknown function DUF419; KEGG: dal:Dalk_4246 protein of unknown function DUF419 YP_003121645.1 KEGG: bpy:Bphyt_1074 abortive phage resistance protein-like protein YP_003121646.1 KEGG: sfu:Sfum_3792 abortive phage resistance protein-like YP_003121647.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_003121648.1 PFAM: protein of unknown function UPF0153; KEGG: sus:Acid_3431 hypothetical protein YP_003121649.1 PFAM: major facilitator superfamily MFS_1; KEGG: aci:ACIAD3048 transporter YP_003121650.1 KEGG: pca:Pcar_1658 carboxy-terminal protease for penicillin-binding protein 3; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003121651.1 KEGG: aba:Acid345_1339 hypothetical protein YP_003121652.1 KEGG: tcx:Tcr_0196 DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003121653.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; KEGG: abb:ABBFA_002383 NADP oxidoreductase coenzyme F420-dependent family protein YP_003121654.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: dvl:Dvul_1509 3-deoxy-D-manno-octulosonate 8- phosphate phosphatase YP_003121655.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin YP_003121656.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: bcy:Bcer98_3171 Maf-like protein YP_003121657.1 PFAM: Domain of unknown function DUF1801; KEGG: gur:Gura_3522 hypothetical protein YP_003121658.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003121659.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: nis:NIS_1553 homoserine dehydrogenase YP_003121660.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: bcy:Bcer98_3084 cystathionine beta-lyase YP_003121663.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_003121664.1 PFAM: outer membrane efflux protein; KEGG: sat:SYN_02462 type I secretion outer membrane protein YP_003121665.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: vvy:VVA1079 membrane-fusion protein YP_003121666.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: noc:Noc_1130 hydrophobe/amphiphile efflux-1 HAE1 YP_003121668.1 PFAM: AsmA family protein; KEGG: rbo:A1I_02730 outer membrane assembly protein YP_003121669.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dde:Dde_1484 tRNA (guanosine-2'-O-)- methyltransferase YP_003121670.1 PFAM: NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: gbe:GbCGDNIH1_1778 hypothetical cytosolic protein YP_003121671.1 KEGG: hypothetical protein; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP- cone domain protein; ribonucleotide reductase large subunit domain protein YP_003121672.1 PFAM: ribonucleotide reductase; KEGG: RIR2A; ribonucleoside-diphosphate reductase small chain; K10808 ribonucleoside-diphosphate reductase subunit M2 YP_003121673.1 PFAM: ABC transporter related; KEGG: rfr:Rfer_3201 ABC transporter related YP_003121675.1 KEGG: bja:bll7458 hypothetical protein YP_003121676.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_2175 oxidoreductase domain- containing protein YP_003121678.1 KEGG: hypothetical protein YP_003121679.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_003121680.1 PFAM: methyltransferase type 11; methyltransferase small; methyltransferase type 12; KEGG: bha:BH2887 hypothetical protein YP_003121681.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: kpe:KPK_4665 3-isopropylmalate dehydratase, small subunit YP_003121682.1 KEGG: nis:NIS_0727 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003121683.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_003121684.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mxa:MXAN_6416 D-alanyl-D-alanine dipeptidase YP_003121685.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aba:Acid345_0642 short-chain dehydrogenase/reductase SDR YP_003121687.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mlo:mll4780 2-hydroxyhepta-2,4-diene-1,7- dioate isomerase YP_003121688.1 PFAM: protein of unknown function DUF718; KEGG: spe:Spro_0643 hypothetical protein YP_003121689.1 PFAM: amidohydrolase 2; KEGG: pat:Patl_0798 amidohydrolase 2 YP_003121690.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_3383 short chain dehydrogenase YP_003121691.1 TIGRFAM: L-fucose transporter; glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: nar:Saro_2428 L-fucose permease YP_003121692.1 PFAM: O-methyltransferase family 3; KEGG: scl:sce1553 O-methyltransferase family protein YP_003121693.1 KEGG: hypothetical protein YP_003121694.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: scl:sce3211 hypothetical protein YP_003121695.1 KEGG: hypothetical protein YP_003121696.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: ppd:Ppro_0093 glucosamine--fructose-6- phosphate aminotransferase, isomerizing YP_003121697.1 KEGG: sfr:Sfri_2302 phosphohistidine phosphatase, SixA YP_003121698.1 TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; KEGG: mxa:MXAN_0378 magnesium transporter YP_003121699.1 PFAM: protein of unknown function UPF0187; KEGG: mca:MCA3057 hypothetical protein YP_003121700.1 SMART: nuclear protein SET; KEGG: bcb:BCB4264_A5217 SET domain protein YP_003121701.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mmw:Mmwyl1_2106 GCN5-related N- acetyltransferase YP_003121702.1 KEGG: saz:Sama_1631 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_003121703.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_003121704.1 KEGG: bba:Bd2721 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; amidohydrolase YP_003121705.1 PFAM: glycoside hydrolase family 5; coagulation factor 5/8 type domain protein; KEGG: bsu:BSU18130 endo-1,4-beta-glucanase YP_003121706.1 TIGRFAM: formiminoglutamase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: aha:AHA_0378 formimidoylglutamase YP_003121708.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_003121709.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: bph:Bphy_1492 phosphodiesterase YP_003121710.1 TIGRFAM: outer membrane insertion C-terminal signal YP_003121711.1 KEGG: mlo:mll0172 hypothetical protein YP_003121712.1 Catalyzes the conversion of citrate to isocitrate YP_003121714.1 KEGG: acp:A2cp1_1816 hypothetical protein YP_003121716.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_003121717.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rso:RS02291 oxidoreductase protein YP_003121718.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gdi:GDI1376 AraC family transcriptional regulator YP_003121719.1 PFAM: peptidase S41; SMART: peptidase S41; KEGG: mmr:Mmar10_0061 peptidase S41 YP_003121720.1 KEGG: noc:Noc_2288 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003121721.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_003121722.1 KEGG: abu:Abu_2173 phosphoadenosine phosphosulfate reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_003121723.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: transcriptional regulator, BadM/Rrf2 family YP_003121724.1 KEGG: sus:Acid_6981 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003121726.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003121727.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bha:BH4058 centromere-like function involved in forespore chromosome partition YP_003121728.1 PFAM: beta-lactamase domain protein; KEGG: bcr:BCAH187_A4741 metallo-beta-lactamase family protein YP_003121729.1 PFAM: metallophosphoesterase; KEGG: mxa:MXAN_0888 Ser/Thr protein phosphatase family protein YP_003121731.1 KEGG: hypothetical protein YP_003121732.1 KEGG: afw:Anae109_2098 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase YP_003121734.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_003121735.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_003121736.1 KEGG: azc:AZC_1301 endoglucanase YP_003121738.1 PFAM: GCN5-related N-acetyltransferase; KEGG: GNAT family acetyltransferase YP_003121739.1 KEGG: bcb:BCB4264_A0950 thioredoxin YP_003121740.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase X; KEGG: bja:blr8027 DNA polymerase beta family protein YP_003121741.1 KEGG: bpy:Bphyt_3433 histone H1-like protein YP_003121742.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: rsh:Rsph17029_3512 50S ribosomal protein L27 YP_003121743.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: rty:RT0736 50S ribosomal protein L21 YP_003121744.1 PFAM: GH3 auxin-responsive promoter; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein YP_003121745.1 KEGG: mag:amb2492 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003121746.1 PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: cak:Caul_2798 membrane-associated zinc metalloprotease YP_003121747.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: amc:MADE_01275 two-component sensor histidine kinase YP_003121748.1 PFAM: mechanosensitive ion channel MscS; KEGG: aba:Acid345_0914 MscS mechanosensitive ion channel YP_003121752.1 KEGG: mxa:MXAN_4007 hypothetical protein YP_003121753.1 PFAM: HipA domain protein; KEGG: hch:HCH_01139 uncharacterized protein related to capsule biosynthesis enzyme YP_003121754.1 SMART: helix-turn-helix domain protein; KEGG: hch:HCH_01138 transcriptional regulator YP_003121755.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein YP_003121756.1 PFAM: histidine kinase internal region; KEGG: sde:Sde_3001 DEAD/DEAH box helicase-like YP_003121757.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hypothetical protein YP_003121759.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL2358 short-chain dehydrogenase/reductase YP_003121760.1 PFAM: nitroreductase; KEGG: bba:Bd1162 hypothetical protein YP_003121761.1 PFAM: helix-turn-helix HxlR type; KEGG: sme:SMc02225 hypothetical protein YP_003121763.1 KEGG: rde:RD1_A0036 hypothetical protein YP_003121764.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: rpe:RPE_2448 DEAD/DEAH box helicase domain protein YP_003121768.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate YP_003121769.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003121770.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003121771.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: similar to kyphoscoliosis peptidase YP_003121772.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rpt:Rpal_0551 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003121773.1 PFAM: FecR protein; KEGG: abu:Abu_1453 sigma factor regulatory protein FecR/PupR family YP_003121774.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121775.1 PFAM: RagB/SusD domain protein YP_003121776.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003121778.1 PFAM: LytTr DNA-binding region YP_003121779.1 PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: gur:Gura_4192 two component, sigma-54 specific, fis family transcriptional regulator YP_003121780.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: gur:Gura_2118 signal transduction histidine kinase YP_003121781.1 PFAM: aldehyde dehydrogenase; KEGG: bpy:Bphyt_7193 aldehyde dehydrogenase YP_003121782.1 KEGG: jan:Jann_0775 signal peptide and transmembrane prediction YP_003121783.1 PFAM: HopJ type III effector protein; KEGG: aci:ACIAD0424 type III effector HopPmaJ YP_003121784.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_003121785.1 KEGG: bcj:BCAL2499 hypothetical protein YP_003121786.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: aba:Acid345_3897 NmrA-like YP_003121787.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003121788.1 PFAM: FecR protein; KEGG: ppf:Pput_2219 anti-FecI sigma factor, FecR YP_003121789.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: sus:Acid_0312 ECF subfamily RNA polymerase sigma-24 factor YP_003121791.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121792.1 PFAM: RagB/SusD domain protein YP_003121794.1 PFAM: protein of unknown function DUF1696; KEGG: pna:Pnap_1530 protein of unknown function DUF1696 YP_003121796.1 PFAM: ATP-binding region ATPase domain protein; hypothetical protein; hypothetical protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: rle:pRL100407 two-component sensor histidine kinase transcriptional regulatory protein YP_003121797.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: cps:CPS_1260 nitrate/nitrite DNA- binding response regulator YP_003121799.1 KEGG: protein kinase YP_003121800.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003121801.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pla:Plav_0951 ECF subfamily RNA polymerase sigma-24 factor YP_003121802.1 PFAM: FecR protein; KEGG: pzu:PHZ_c2395 transcriptional regulator YP_003121803.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121804.1 PFAM: RagB/SusD domain protein YP_003121805.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003121806.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein YP_003121808.1 PFAM: glycoside hydrolase family 43; KEGG: sus:Acid_2993 glycoside hydrolase family protein YP_003121809.1 KEGG: mxa:MXAN_6961 PBS lyase heat-like repeat protein YP_003121813.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ent:Ent638_3442 TonB-dependent siderophore receptor YP_003121814.1 PFAM: conserved hypothetical protein; KEGG: sun:SUN_0983 hypothetical protein YP_003121815.1 KEGG: xca:xccb100_3123 membrane-anchored nucleotide- binding enzyme YP_003121817.1 KEGG: msl:Msil_0956 glyoxalase/bleomycin resistance protein/dioxygenase YP_003121819.1 PFAM: Ricin B lectin; glycoside hydrolase family 5; SMART: Ricin B lectin; KEGG: eca:ECA0852 exported plant proteoglycan hydrolase YP_003121820.1 PFAM: GumN family protein; KEGG: mes:Meso_3402 GumN YP_003121821.1 KEGG: mxa:MXAN_1648 hypothetical protein YP_003121824.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: rle:RL2358 short-chain dehydrogenase/reductase YP_003121825.1 PFAM: protein of unknown function DUF1361 YP_003121829.1 KEGG: aba:Acid345_4063 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; hypothetical protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein YP_003121830.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sus:Acid_1603 two component LuxR family transcriptional regulator YP_003121831.1 KEGG: ank:AnaeK_1868 peptidase zinc-dependent YP_003121832.1 KEGG: aba:Acid345_1846 hypothetical protein YP_003121833.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: sbl:Sbal_0690 ECF subfamily RNA polymerase sigma-24 factor YP_003121836.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_04392 hypothetical protein YP_003121837.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A2710 glyoxalase/bleomycin resistance protein, GloA-like YP_003121839.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pag:PLES_02451 transcriptional regulator YP_003121840.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bur:Bcep18194_C6909 peptidase M17, leucyl aminopeptidase-like YP_003121841.1 KEGG: pla:Plav_2386 hypothetical protein YP_003121842.1 PFAM: ferritin Dps family protein; KEGG: cvi:CV_4253 DNA-binding stress protein YP_003121843.1 PFAM: aminotransferase class I and II; KEGG: smd:Smed_1974 transcriptional regulator, GntR family YP_003121844.1 PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_15630 hypothetical protein YP_003121845.1 PFAM: haloacid dehalogenase; KEGG: ppr:PBPRA2135 hypothetical protein YP_003121846.1 PFAM: alcohol dehydrogenase GroES domain protein; KEGG: eta:ETA_29000 alcohol dehydrogenase YP_003121847.1 PFAM: aminotransferase class-III; KEGG: plu:plu0473 hypothetical protein YP_003121850.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: nha:Nham_1039 (2Fe-2S)-binding YP_003121851.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: psp:PSPPH_4342 oxidoreductase, molybdopterin- binding subunit YP_003121852.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: mno:Mnod_2924 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_003121853.1 KEGG: gme:Gmet_1419 exopolyphosphatase / 5'- nucleotidase / 3'-nucleotidase; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_003121854.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: bca:BCE_4976 BmrU protein YP_003121855.1 PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vfm:VFMJ11_A1201 spermidine/putrescine import ATP-binding protein PotA YP_003121856.1 KEGG: ppd:Ppro_3757 DNA helicase YP_003121857.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: scl:sce7813 hypothetical protein YP_003121858.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: scl:sce5100 two-component hybrid histidine kinase YP_003121859.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mlo:mlr1925 oxidoreductase, iron-sulphur binding subunit YP_003121860.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mpo:Mpop_0759 molybdopterin dehydrogenase FAD- binding YP_003121861.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sme:SM_b21556 aldehyde or xanthine dehydrogenase protein YP_003121862.1 KEGG: gbm:Gbem_0343 exodeoxyribonuclease V, alpha subunit; TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase YP_003121863.1 KEGG: gur:Gura_0582 exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: exodeoxyribonuclease V RecC subunit YP_003121864.1 PFAM: UvrD/REP helicase; KEGG: dal:Dalk_2848 exodeoxyribonuclease V, beta subunit YP_003121865.1 KEGG: bbr:BB0107 hypothetical protein YP_003121866.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_003121867.1 KEGG: msl:Msil_3906 UDP-glucuronosyl/UDP- glucosyltransferase YP_003121868.1 KEGG: hypothetical protein YP_003121869.1 converts 1,4-alpha-D-glucans to maltodextrin YP_003121870.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: amc:MADE_01964 serine carboxypeptidase YP_003121871.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003121872.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: vvu:VV2_0174 hypothetical protein YP_003121873.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rpi:Rpic_2943 two component transcriptional regulator, LuxR family YP_003121874.1 TIGRFAM: conserved repeat domain protein; KEGG: dal:Dalk_0072 conserved repeat domain protein YP_003121876.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein YP_003121877.1 KEGG: ppr:PBPRB0541 chitinase; PFAM: glycoside hydrolase family 18; carbohydrate- binding family V/XII; PKD domain containing protein; SMART: chitinase II; carbohydrate-binding protein; PKD domain containing protein YP_003121878.1 SMART: beta and gamma crystallin; KEGG: mxa:MXAN_5269 S1D (lysyl endopeptidase) subfamily C-terminal domain protein YP_003121879.1 PFAM: glycoside hydrolase family 18; carbohydrate-binding protein; SMART: chitinase II; cellulose binding type IV; KEGG: hch:HCH_03091 glycosyl hydrolase YP_003121880.1 PFAM: carbohydrate-binding protein; glycoside hydrolase family 16; SMART: cellulose binding type IV; KEGG: cja:CJA_2759 beta glucanase, , glu16F YP_003121881.1 PFAM: peptidase domain protein; SMART: beta and gamma crystallin; KEGG: sse:Ssed_3289 PKD repeat-containing protein YP_003121882.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mlo:mll1224 RNA polymerase sigma factor YP_003121883.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family YP_003121884.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121888.1 SMART: PKD domain containing protein; Parallel beta- helix repeat; KEGG: hypothetical protein YP_003121889.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sil:SPO0571 PKD domain-containing protein YP_003121891.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: xop:PXO_02523 OmpA family outer membrane protein YP_003121893.1 KEGG: ade:Adeh_3163 hypothetical protein YP_003121894.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: smt:Smal_1610 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003121895.1 KEGG: hypothetical protein YP_003121896.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate YP_003121897.1 KEGG: pen:PSEEN2510 hypothetical protein YP_003121898.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; redoxin; KEGG: sus:Acid_2283 redoxin domain-containing protein YP_003121899.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: dvu:DVU0888 response regulator YP_003121900.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: cps:CPS_0274 sigma-54 dependent transcriptional regulator/sensory box protein YP_003121901.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: nmu:Nmul_A1400 zinc-containing alcohol dehydrogenase superfamily protein YP_003121902.1 PFAM: DinB family protein; KEGG: bsu:BSU26780 hypothetical protein YP_003121903.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1910 short chain dehydrogenase YP_003121904.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hap:HAPS_1638 transcriptional regulator, AraC family YP_003121905.1 KEGG: azc:AZC_1385 hypothetical protein YP_003121906.1 PFAM: alpha/beta hydrolase; KEGG: bid:Bind_1826 alpha/beta hydrolase YP_003121908.1 PFAM: LytTr DNA-binding region; KEGG: xca:xccb100_2363 sensory transduction protein YP_003121912.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: bqu:BQ01840 protoporphyrinogen oxidase protein YP_003121913.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: sat:SYN_00578 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5- amino-6-(5-phosphoribosylamino)uracil reductase YP_003121914.1 KEGG: similar to myosin light chain kinase; K00907 myosin-light-chain kinase YP_003121915.1 PFAM: protein of unknown function UPF0029; KEGG: nma:NMA0240 hypothetical protein NMA0240 YP_003121916.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: aba:Acid345_4328 3-hydroxyacyl-CoA dehydrogenase YP_003121918.1 PFAM: protein of unknown function DUF59; KEGG: mxa:MXAN_3803 ATP-binding protein, Mrp/Nbp35 family YP_003121919.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_6247 oxidoreductase domain- containing protein YP_003121920.1 PFAM: xylose isomerase; KEGG: swi:Swit_1902 xylose isomerase domain- containing protein YP_003121922.1 KEGG: azo:azo3659 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003121923.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: gme:Gmet_2075 acyl-CoA dehydrogenase-like YP_003121924.1 PFAM: ApbE family lipoprotein; KEGG: pmr:PMI0358 thiamine biosynthesis lipoprotein YP_003121926.1 KEGG: cti:RALTA_A1507 lipoprotein YP_003121928.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: rec:RHECIAT_PC0000786 hydrolase protein, haloacid dehalogenase-like family YP_003121930.1 KEGG: aba:Acid345_1764 membrane protein YP_003121931.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: scl:sce3225 dehydrogenase YP_003121932.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003121933.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: abu:Abu_0012 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_003121934.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tdn:Suden_0925 molybdate ABC transporter permease YP_003121935.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tdn:Suden_0926 ABC transporter-related protein YP_003121936.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: hypothetical protein YP_003121937.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bcb:BCB4264_A1387 sensor histidine kinase KinD YP_003121938.1 PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2879 glycosyl transferase family protein YP_003121941.1 PFAM: alpha-L-arabinofuranosidase; KEGG: bha:BH1874 alpha-L-arabinosidase YP_003121942.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00185 TonB-dependent receptor YP_003121943.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein YP_003121944.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: SLEI family protein YP_003121945.1 PFAM: glycosyl transferase family 2; KEGG: psa:PST_0048 glycosyl transferase, group 2 family protein YP_003121946.1 PFAM: glycosyl transferase family 2; KEGG: psa:PST_0048 glycosyl transferase, group 2 family protein YP_003121948.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nis:NIS_0118 two-component response regulator YP_003121949.1 PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; KEGG: aav:Aave_3996 multi-sensor hybrid histidine kinase YP_003121950.1 KEGG: vvy:VVA0934 methylase of chemotaxis methyl- accepting protein; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_003121951.1 PFAM: CheB methylesterase; KEGG: aav:Aave_3994 CheB methylesterase YP_003121952.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2639 response regulator receiver sensor signal transduction histidine kinase YP_003121954.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR YP_003121955.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: bja:blr3042 RNA polymerase sigma factor YP_003121956.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003121957.1 KEGG: mxa:MXAN_4747 lipoprotein YP_003121958.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sbp:Sbal223_2403 redoxin domain protein YP_003121962.1 KEGG: mpt:Mpe_A2655 hypothetical protein YP_003121963.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swi:Swit_1585 AraC family transcriptional regulator YP_003121964.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_4454 oxidoreductase domain- containing protein YP_003121965.1 KEGG: xau:Xaut_2803 heat repeat-containing PBS lyase YP_003121967.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: hypothetical protein YP_003121968.1 KEGG: gur:Gura_3003 YVTN beta-propeller repeat- containing protein YP_003121969.1 PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_2094 glycosyl transferase YP_003121970.1 KEGG: amc:MADE_02480 sugar transferase involved in lipopolysaccharide synthesis; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; undecaprenyl-phosphate glucose phosphotransferase; PFAM: sugar transferase YP_003121971.1 TIGRFAM: methyltransferase FkbM family; KEGG: noc:Noc_1518 methyltransferase FkbM YP_003121972.1 PFAM: glycosyl transferase group 1; KEGG: ypi:YpsIP31758_3042 glycosyl transferase WbyK, group 1 family protein YP_003121974.1 KEGG: pnu:Pnuc_0307 hemolytic protein HlpA-like protein YP_003121975.1 KEGG: mca:MCA1151 hypothetical protein YP_003121976.1 KEGG: pub:SAR11_0393 SAM-dependent methyltransferase YP_003121977.1 PFAM: polysaccharide biosynthesis protein; KEGG: dol:Dole_0532 polysaccharide biosynthesis protein YP_003121978.1 KEGG: sun:SUN_1559 capsular polysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_003121979.1 PFAM: polysaccharide export protein; KEGG: sun:SUN_1557 polysaccharide export system outer membrane protein YP_003121980.1 PFAM: acyltransferase 3; KEGG: ppu:PP_1781 O-acyltransferase YP_003121981.1 KEGG: gbm:Gbem_2578 hypothetical protein YP_003121982.1 TIGRFAM: methyltransferase FkbM family; KEGG: rru:Rru_A2093 methyltransferase FkbM YP_003121983.1 PFAM: protein of unknown function UPF0027; KEGG: pca:Pcar_2835 hypothetical protein YP_003121984.1 PFAM: beta-lactamase domain protein; KEGG: mrd:Mrad2831_2427 beta-lactamase domain- containing protein YP_003121988.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: bbr:BB4580 copper resistance protein YP_003121990.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppf:Pput_2236 AraC family transcriptional regulator YP_003121991.1 KEGG: net:Neut_1346 transcriptional regulator, AraC family protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type YP_003121992.1 PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: acr:Acry_1823 ATPase YP_003121994.1 KEGG: GL21531 gene product from transcript GL21531- RA YP_003121996.1 PFAM: lytic transglycosylase catalytic; KEGG: sfu:Sfum_0486 lytic transglycosylase, catalytic YP_003121998.1 PFAM: GPW/gp25 family protein; KEGG: rde:RD1_4224 hypothetical protein YP_003121999.1 PFAM: PKD domain containing protein YP_003122003.1 KEGG: DNA-directed RNA polymerase, omega subunit family protein YP_003122006.1 PFAM: YceI family protein; KEGG: dar:Daro_2795 YceI YP_003122007.1 KEGG: mxa:MXAN_6481 hypothetical protein YP_003122008.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein YP_003122009.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_003122010.1 PFAM: aldehyde dehydrogenase; KEGG: scl:sce5973 succinate-semialdehyde dehydrogenase (NAD(P)(+)) YP_003122011.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vco:VC0395_A2573 transcriptional regulator, AraC/XylS family YP_003122012.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_3218 TonB-dependent receptor for Fe YP_003122013.1 KEGG: pca:Pcar_2983 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_003122014.1 KEGG: ban:BA4844 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_003122015.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: pha:PSHAa1273 prolyl endopeptidase YP_003122016.1 PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein YP_003122017.1 KEGG: hypothetical protein YP_003122018.1 KEGG: glo:Glov_3556 TonB-dependent receptor plug YP_003122019.1 PFAM: hypothetical protein; Tetratricopeptide TPR_3; hypothetical protein; SMART: Sel1 domain protein repeat-containing protein; hypothetical protein; KEGG: hypothetical protein YP_003122020.1 PFAM: DoxX family protein; KEGG: pfo:Pfl01_1964 DoxX YP_003122021.1 PFAM: thioesterase superfamily protein; KEGG: sfu:Sfum_1216 thioesterase superfamily protein YP_003122022.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: gme:Gmet_0196 competence/damage-inducible protein CinA YP_003122023.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: sus:Acid_0914 dihydrolipoyllysine-residue succinyltransferase YP_003122024.1 PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: dde:Dde_1175 RNA-binding region RNP-1 YP_003122026.1 KEGG: fph:Fphi_0348 hypothetical protein YP_003122027.1 PFAM: protein of unknown function DUF985; KEGG: pca:Pcar_1054 hypothetical protein YP_003122028.1 KEGG: swd:Swoo_1190 AraC family transcriptional regulator YP_003122029.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003122030.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: xac:XAC2809 hypothetical protein YP_003122031.1 PFAM: glycosyl transferase family 2; KEGG: hypothetical protein YP_003122032.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: hypothetical protein; K02342 DNA polymerase III subunit epsilon YP_003122033.1 PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: ftm:FTM_0592 UDP-N-acetylmuramate:L-alanyl- gamma-D-glutamyl-meso-diaminopimelate ligase YP_003122035.1 KEGG: bcr:BCAH187_A4813 hypothetical protein YP_003122036.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy- lyase; PFAM: flavoprotein; KEGG: ade:Adeh_0373 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_003122037.1 KEGG: cff:CFF8240_1505 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_003122038.1 PFAM: peptidase M42 family protein; peptidase M20; KEGG: glo:Glov_1943 peptidase M42 family protein YP_003122039.1 KEGG: dal:Dalk_3710 hydroxymethylbutenyl pyrophosphate reductase YP_003122040.1 PFAM: carboxyl transferase; KEGG: sus:Acid_1492 carboxyl transferase YP_003122042.1 KEGG: bav:BAV0647 acyl-protein synthetase YP_003122046.1 KEGG: sml:Smlt3111 hypothetical protein YP_003122047.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: msl:Msil_1887 adenylate/guanylate cyclase YP_003122048.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rle:RL1819 two component sensor histidine kinase transcriptional regulatory protein YP_003122049.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: mms:mma_2916 LuxR family DNA-binding response regulator YP_003122050.1 KEGG: sun:SUN_1557 polysaccharide export system outer membrane protein YP_003122051.1 KEGG: sun:SUN_1559 capsular polysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_003122052.1 PFAM: NGN domain protein; SMART: NGN domain protein; KEGG: sat:SYN_00580 transcription antitermination protein YP_003122053.1 PFAM: Nucleotidyl transferase; KEGG: tcx:Tcr_1678 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_003122054.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; KEGG: gme:Gmet_1312 NAD-dependent epimerase/dehydratase YP_003122055.1 KEGG: hch:HCH_04938 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase YP_003122056.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase YP_003122057.1 PFAM: polysaccharide biosynthesis protein; KEGG: cti:RALTA_B0034 hypothetical protein YP_003122058.1 KEGG: abn:AB57_0097 hypothetical protein YP_003122059.1 PFAM: glycosyl transferase group 1; KEGG: vco:VC0395_A0450 polysaccharide biosynthesis protein YP_003122060.1 PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4651 glycosyl transferase, group 1 YP_003122061.1 KEGG: cti:RALTA_B0036 hypothetical protein YP_003122062.1 PFAM: acyltransferase 3; KEGG: mlo:mlr0961 glycosyltransferase YP_003122063.1 PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_B0037 glycosyl transferase YP_003122064.1 PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_2096 glycosyltransferase YP_003122065.1 PFAM: VanZ family protein; KEGG: bha:BH2294 hypothetical protein YP_003122066.1 KEGG: sus:Acid_4656 colanic acid biosynthesis acetyltransferase WcaF YP_003122067.1 PFAM: glycosyl transferase group 1; KEGG: ent:Ent638_2664 glycosyl transferase YP_003122068.1 KEGG: mmw:Mmwyl1_0842 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003122070.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_003122071.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: glo:Glov_3344 rubredoxin-type Fe(Cys)4 protein YP_003122072.1 PFAM: molybdopterin oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: pmy:Pmen_2094 assimilatory nitrate reductase (NADH) alpha subunit apoprotein YP_003122073.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_0186 major facilitator transporter YP_003122074.1 KEGG: net:Neut_1053 hypothetical protein YP_003122075.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: pca:Pcar_2879 nitrite reductase (NAD(P)H)subunit YP_003122076.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: rpi:Rpic_4164 nitrite reductase (NAD(P)H), large subunit YP_003122077.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bce:BC1426 uroporphyrin-III C- methyltransferase YP_003122078.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mmw:Mmwyl1_2233 CRP/FNR family transcriptional regulator YP_003122079.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: cps:CPS_1260 nitrate/nitrite DNA- binding response regulator YP_003122080.1 KEGG: rme:Rmet_0092 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein YP_003122081.1 PFAM: catalase domain protein; ThiJ/PfpI domain protein; KEGG: psa:PST_0039 hydroperoxidase II YP_003122082.1 PFAM: protein of unknown function DUF892; KEGG: bra:BRADO3239 hypothetical protein YP_003122083.1 KEGG: sus:Acid_5657 hypothetical protein YP_003122084.1 KEGG: vha:VIBHAR_02923 hypothetical protein YP_003122085.1 KEGG: bba:Bd2932 hypothetical protein YP_003122086.1 KEGG: hypothetical protein YP_003122088.1 PFAM: transcriptional regulator PadR family protein; KEGG: sus:Acid_1736 PadR family transcriptional regulator YP_003122089.1 PFAM: aminotransferase class I and II; aminotransferase class-III; aromatic amino acid beta- eliminating lyase/threonine aldolase; KEGG: mxa:MXAN_3748 aminotransferase, class II YP_003122090.1 KEGG: mxa:MXAN_3747 hypothetical protein YP_003122091.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4- dehydrorhamnose reductase; KEGG: scl:sce7198 hypothetical protein YP_003122092.1 PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: aba:Acid345_2392 inositol-3-phosphate synthase YP_003122093.1 PFAM: phosphatidylglycerophosphatase A; KEGG: dol:Dole_1265 phosphatidylglycerophosphatase A YP_003122094.1 KEGG: mxa:MXAN_0450 CDP-alcohol phosphatidyltransferase family protein YP_003122095.1 KEGG: hypothetical protein YP_003122096.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sus:Acid_6711 CDP-alcohol phosphatidyltransferase YP_003122097.1 PFAM: fatty acid hydroxylase; KEGG: msl:Msil_3036 fatty acid hydroxylase YP_003122098.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mxa:MXAN_0451 PAP2 family protein YP_003122099.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: rpe:RPE_0115 methyltransferase type 12 YP_003122101.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ade:Adeh_0361 molybdopterin-binding oxidoreductase YP_003122103.1 SMART: AAA ATPase; DEAD-like helicase; KEGG: mxa:MXAN_5972 DNA helicase YP_003122106.1 KEGG: hch:HCH_04271 hypothetical protein YP_003122107.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: lip:LI0288 PAP2 superfamily protein YP_003122109.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: csa:Csal_1162 aminotransferase YP_003122110.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: afw:Anae109_3157 glyoxalase/bleomycin resistance protein/dioxygenase YP_003122111.1 TIGRFAM: RNA ligase, DRB0094 family; KEGG: hypothetical protein YP_003122112.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bce:BC4053 GntR family transcriptional regulator YP_003122113.1 PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; KEGG: aba:Acid345_0644 glycosyl hydrolases 38-like YP_003122114.1 KEGG: aba:Acid345_0639 mannose-6-phosphate isomerase-like protein YP_003122115.1 TIGRFAM: sugar transporter; PFAM: ABC transporter substrate-binding protein; major facilitator superfamily MFS_1; KEGG: bsu:BSU33960 permease YP_003122116.1 PFAM: ROK family protein; KEGG: aba:Acid345_1696 sugar kinase YP_003122117.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: abc:ACICU_01927 dihydrofolate reductase YP_003122118.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpe:BP2149 AraC family transcriptional regulator YP_003122119.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: azc:AZC_0722 pyruvate dehydrogenase YP_003122120.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppw:PputW619_2736 AraC family transcriptional regulator YP_003122121.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein YP_003122122.1 KEGG: dac:Daci_2531 hypothetical protein YP_003122123.1 KEGG: ccs:CCNA_01284 endo-1,4-beta-xylanase YP_003122124.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: afw:Anae109_0577 regulatory protein ArsR YP_003122125.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02133 GNAT family acetyltransferase YP_003122126.1 PFAM: RagB/SusD domain protein YP_003122127.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122128.1 PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR YP_003122131.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sus:Acid_2537 ECF subfamily RNA polymerase sigma-24 factor YP_003122132.1 PFAM: amino acid permease-associated region; KEGG: sus:Acid_1927 amino acid permease-associated region YP_003122133.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bbt:BBta_3158 RNA polymerase sigma factor YP_003122134.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family YP_003122135.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122136.1 PFAM: RagB/SusD domain protein YP_003122137.1 PFAM: PA14 domain protein; Ricin B lectin; SMART: PA14 domain protein; Ricin B lectin; beta and gamma crystallin; KEGG: hch:HCH_04441 QXW lectin repeat-containing protein YP_003122138.1 PFAM: ankyrin; SMART: ankyrin; KEGG: bba:Bd1155 ankyrin domain-containing protein YP_003122139.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bba:Bd2516 redox-sensitive transcriptional activator YP_003122140.1 PFAM: ankyrin; SMART: ankyrin; KEGG: swi:Swit_5249 ankyrin YP_003122142.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: slo:Shew_1895 redoxin domain-containing protein YP_003122146.1 KEGG: scl:sce4071 alpha-2-macroglobulin YP_003122147.1 KEGG: hypothetical protein YP_003122149.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: nma:NMA0976 signal peptidase I YP_003122150.1 PFAM: O-antigen polymerase; KEGG: pin:Ping_0368 O-antigen polymerase YP_003122151.1 KEGG: sde:Sde_1703 hypothetical protein YP_003122152.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sun:SUN_0333 short chain dehydrogenase YP_003122153.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_3505 ABC transporter, permease protein YP_003122154.1 KEGG: hypothetical protein; TIGRFAM: heme-binding protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein YP_003122155.1 KEGG: bba:Bd3619 hypothetical protein YP_003122156.1 KEGG: sus:Acid_1844 hypothetical protein YP_003122158.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: aba:Acid345_4484 glycoside hydrolase family 2, TIM barrel YP_003122159.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ppw:PputW619_2891 TonB-dependent siderophore receptor YP_003122160.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_5330 aldo/keto reductase YP_003122161.1 KEGG: bja:bll0118 hypothetical protein YP_003122162.1 KEGG: aba:Acid345_1351 hypothetical protein YP_003122163.1 PFAM: DinB family protein; KEGG: bha:BH3115 nuclease inhibitor YP_003122164.1 PFAM: PEBP family protein; KEGG: eta:ETA_22690 hypothetical protein YP_003122165.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abu:Abu_1051 AraC family transcriptional regulator YP_003122166.1 KEGG: hch:HCH_01285 acyltransferase YP_003122171.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein YP_003122172.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_3092 EmrB/QacA family drug resistance transporter YP_003122173.1 KEGG: xca:xccb100_4421 exported conserved hypothetical protein YP_003122174.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein YP_003122175.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aba:Acid345_4430 apolipoprotein N- acyltransferase YP_003122176.1 SMART: hypothetical protein; KEGG: scl:sce0710 hypothetical protein YP_003122179.1 KEGG: rfr:Rfer_3496 hypothetical protein YP_003122181.1 PFAM: protein of unknown function DUF692; KEGG: scl:sce0141 hypothetical protein YP_003122184.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: har:HEAR2198 site-specific DNA- methyltransferase (adenine-specific) YP_003122185.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mno:Mnod_8274 TonB-dependent siderophore receptor YP_003122186.1 PFAM: acyltransferase 3; KEGG: gbe:GbCGDNIH1_0742 acyltransferase family YP_003122187.1 KEGG: maq:Maqu_2862 hypothetical protein YP_003122189.1 KEGG: sbn:Sbal195_1727 hypothetical protein YP_003122190.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: cvi:CV_3101 benzoylformate decarboxylase YP_003122191.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cvi:CV_3102 hypothetical protein YP_003122196.1 KEGG: sml:Smlt3699 hypothetical protein YP_003122198.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_5171 transcriptional regulator PobR YP_003122199.1 KEGG: bra:BRADO6402 hypothetical protein YP_003122202.1 KEGG: 235 kDa rhoptry protein YP_003122203.1 PFAM: alpha/beta hydrolase; KEGG: bpy:Bphyt_6177 alpha/beta hydrolase YP_003122204.1 KEGG: hypothetical protein YP_003122205.1 PFAM: helix-turn-helix HxlR type; KEGG: msl:Msil_2802 transcriptional regulator, HxlR family YP_003122206.1 PFAM: NUDIX hydrolase; KEGG: ppr:PBPRB0736 hypothetical protein YP_003122207.1 PFAM: methyltransferase type 11; Cyclopropane-fatty- acyl-phospholipid synthase; methyltransferase type 12; methyltransferase; KEGG: hne:HNE_0921 hypothetical protein YP_003122208.1 PFAM: NLP/P60 protein; KEGG: ppr:PBPRA1436 cell wall-associated hydrolase YP_003122211.1 PFAM: glucose sorbosone dehydrogenase; KEGG: cak:Caul_0825 glucose sorbosone dehydrogenase YP_003122212.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: nwi:Nwi_2139 antibiotic biosynthesis monooxygenase YP_003122213.1 KEGG: cja:CJA_1544 dienelactone hydrolase domain protein YP_003122214.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003122215.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: cak:Caul_5271 ethyl tert-butyl ether degradation EthD YP_003122216.1 PFAM: helix-turn-helix HxlR type; KEGG: gox:GOX2595 hypothetical protein YP_003122217.1 KEGG: Eapa2; experimental autoimmune prostatitis antigen 2 YP_003122222.1 KEGG: cja:CJA_3824 conserved hypothetical protein TIGR00278 YP_003122226.1 KEGG: afw:Anae109_1352 DoxX family protein YP_003122227.1 PFAM: aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; KEGG: hypothetical protein YP_003122230.1 KEGG: bac:BamMC406_0385 hypothetical protein YP_003122231.1 PFAM: integrase catalytic region; KEGG: mgm:Mmc1_2644 integrase, catalytic region YP_003122232.1 PFAM: transposase IS3/IS911 family protein; KEGG: dps:DP1713 transposase YP_003122233.1 KEGG: bha:BH3213 hypothetical protein YP_003122234.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3214 ABC transporter ATP-binding protein YP_003122235.1 KEGG: bha:BH3215 hypothetical protein YP_003122240.1 PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_1745 transposase-like YP_003122241.1 PFAM: integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit YP_003122244.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: wpi:WPa_0273 transcriptional regulator YP_003122245.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: ppg:PputGB1_4747 DNA mismatch endonuclease Vsr YP_003122246.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: cco:CCC13826_0819 modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII; M.HaeIII) YP_003122247.1 KEGG: smd:Smed_3342 thymidine phosphorylase YP_003122248.1 KEGG: rpi:Rpic_2931 hypothetical protein YP_003122249.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: azo:azo0358 two-component sensor kinase YP_003122252.1 KEGG: bca:BCE_A0214 sensor histidine kinase YP_003122256.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase YP_003122257.1 KEGG: sfu:Sfum_2351 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003122258.1 KEGG: sfu:Sfum_2349 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain YP_003122259.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: aba:Acid345_2519 alpha amylase YP_003122260.1 KEGG: noc:Noc_1740 glycogen debranching protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003122261.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A3517 ribosomal-protein-alanine acetyltransferase YP_003122262.1 PFAM: Domain of unknown function DUF1905; KEGG: sde:Sde_3068 hypothetical protein YP_003122263.1 SMART: RNA binding S1 domain protein; KEGG: pin:Ping_1452 RNA-binding S1 domain- containing protein YP_003122264.1 PFAM: glycoside hydrolase family 18; glycoside hydrolase family 5; SMART: chitinase II; KEGG: hch:HCH_05453 chitinase YP_003122265.1 KEGG: cja:CJA_0276 carbohydrate binding protein, , cbp6B YP_003122266.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mxa:MXAN_6178 efflux transporter, RND family, MFP subunit YP_003122267.1 PFAM: acriflavin resistance protein; KEGG: mxa:MXAN_6177 efflux transporter, AcrB/AcrD/AcrF family, inner membrane component YP_003122268.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_6176 outer membrane efflux protein YP_003122269.1 PFAM: histidine kinase A domain protein; ATP- binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; ATP- binding region ATPase domain protein; KEGG: rme:Rmet_5673 heavy metal sensor signal transduction histidine kinase YP_003122270.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sun:SUN_1067 two-component response regulator YP_003122271.1 KEGG: rso:RSc0115 hemagglutinin-related protein YP_003122272.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sus:Acid_6164 Ig family protein YP_003122276.1 KEGG: aba:Acid345_3979 hypothetical protein YP_003122277.1 KEGG: rde:RD1_B0029 hypothetical protein YP_003122278.1 PFAM: fatty acid desaturase; KEGG: mxa:MXAN_3495 fatty acid desaturase family protein YP_003122279.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: sat:SYN_00133 lipid A biosynthesis lauroyl acyltransferase YP_003122280.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rle:pRL120678 alpha-L-fucosidase YP_003122281.1 KEGG: scl:sce5997 ArsR family transcriptional regulator YP_003122283.1 KEGG: abu:Abu_0902 cytochrome C family protein YP_003122285.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rfr:Rfer_1116 glycerophosphoryl diester phosphodiesterase YP_003122286.1 PFAM: sulfatase; KEGG: sus:Acid_0879 sulfatase YP_003122288.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: maq:Maqu_3825 DEAD/DEAH box helicase domain- containing protein YP_003122289.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; hypothetical protein; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003122290.1 PFAM: beta-lactamase domain protein; SMART: rhodanese domain protein; KEGG: sus:Acid_7272 beta-lactamase domain- containing protein YP_003122291.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: tcx:Tcr_0170 hypothetical protein YP_003122292.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dvl:Dvul_1597 protein of unknown function DUF395, YeeE/YedE YP_003122293.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; KEGG: hypothetical protein; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein YP_003122295.1 PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: pmu:PM0984 hypothetical protein YP_003122296.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: ank:AnaeK_1000 cytochrome bd ubiquinol oxidase subunit I YP_003122297.1 PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: scl:sce2438 terminal oxidase subunit II YP_003122298.1 KEGG: bce:BC3292 hypothetical protein YP_003122299.1 KEGG: rso:RS02101 hemagglutinin-related protein YP_003122300.1 PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; KEGG: scl:sce1921 endoribonucleases active with either ribo-or deoxyribonucleic acids YP_003122301.1 PFAM: beta-lactamase; KEGG: hypothetical protein YP_003122302.1 KEGG: hypothetical protein YP_003122307.1 PFAM: metallophosphoesterase YP_003122308.1 PFAM: aldo/keto reductase; KEGG: abc:ACICU_03463 oxidoreductase YP_003122309.1 KEGG: ccs:CCNA_00858 TonB-dependent receptor YP_003122311.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mms:mma_1362 RNA polymerase sigma factor RpoE YP_003122313.1 KEGG: rlt:Rleg2_2227 hypothetical protein YP_003122314.1 KEGG: gme:Gmet_2981 hypothetical protein YP_003122315.1 KEGG: swd:Swoo_2503 hypothetical protein YP_003122316.1 PFAM: helix-turn-helix HxlR type; KEGG: bce:BC4316 MarR family transcriptional regulator YP_003122317.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ppw:PputW619_3235 alcohol dehydrogenase YP_003122318.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_0499 AraC family transcriptional regulator YP_003122319.1 PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_1991 transport protein AraJ YP_003122320.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: scl:sce1268 GntR family transcriptional regulator YP_003122321.1 KEGG: pfl:PFL_2128 acetyltransferase YP_003122322.1 PFAM: GCN5-related N-acetyltransferase; KEGG: asu:Asuc_0740 prolyl aminopeptidase YP_003122323.1 KEGG: aceF; dihydrolipoamide acetyltransferase YP_003122324.1 KEGG: sat:SYN_01430 GerE transcriptional regulator YP_003122327.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpe:BP2620 membrane efflux protein YP_003122328.1 PFAM: helix-turn-helix HxlR type; KEGG: dvm:DvMF_2974 transcriptional regulator, HxlR family YP_003122330.1 PFAM: helix-turn-helix HxlR type; KEGG: bcr:BCAH187_A3455 hypothetical protein YP_003122331.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: alcohol dehydrogenase GroES domain protein YP_003122332.1 PFAM: CheB methylesterase; KEGG: mgm:Mmc1_3390 MCP methyltransferase, CheR- type YP_003122333.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mfa:Mfla_1840 tRNA-adenosine deaminase YP_003122334.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mlo:mlr8209 hypothetical protein YP_003122335.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_3019 transcriptional regulator, MarR family with acetyltransferase activity YP_003122337.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: scl:sce1411 dehydrogenase YP_003122338.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003122339.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: reh:H16_A3389 response regulator containing a LytTR DNA-binding domain YP_003122340.1 PFAM: histidine kinase internal region; KEGG: hypothetical protein YP_003122341.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: cja:CJA_3267 thiol:disulfide interchange protein DsbE YP_003122343.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003122344.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region YP_003122345.1 PFAM: outer membrane efflux protein; KEGG: saz:Sama_3048 outer membrane channel protein YP_003122346.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cbg:CbuG_1197 acriflavin resistance periplasmic protein YP_003122347.1 PFAM: acriflavin resistance protein; KEGG: dde:Dde_0965 AcrB/AcrD/AcrF family protein YP_003122349.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: mxa:MXAN_5134 MutS domain protein YP_003122350.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: vsa:VSAL_I0632 DNA mismatch repair protein MutS YP_003122351.1 PFAM: ABC-2 type transporter; KEGG: mca:MCA3077 ABC transporter, permease protein YP_003122352.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2644 ABC transporter, ATPase subunit YP_003122353.1 PFAM: RagB/SusD domain protein YP_003122354.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122355.1 PFAM: FecR protein; KEGG: nwi:Nwi_3080 FecR protein YP_003122356.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: ppu:PP_4608 ECF subfamily RNA polymerase sigma factor YP_003122357.1 PFAM: beta-lactamase domain protein; KEGG: rle:pRL110137 cyclase/dehydrase YP_003122358.1 PFAM: metallophosphoesterase; KEGG: mxa:MXAN_0888 Ser/Thr protein phosphatase family protein YP_003122359.1 PFAM: cyclic nucleotide-binding; KEGG: sde:Sde_3995 cyclic nucleotide-binding protein YP_003122360.1 PFAM: nitroreductase; KEGG: dar:Daro_1339 nitroreductase YP_003122361.1 KEGG: son:SO_1000 rhomboid family protein YP_003122362.1 PFAM: rhomboid family protein; KEGG: shw:Sputw3181_3263 rhomboid family protein YP_003122363.1 KEGG: dal:Dalk_2193 hypothetical protein YP_003122364.1 PFAM: regulatory protein TetR; KEGG: msl:Msil_0388 transcriptional regulator, TetR family YP_003122366.1 KEGG: xca:xccb100_3880 hypothetical protein YP_003122367.1 KEGG: sus:Acid_7554 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003122368.1 PFAM: YceI family protein; KEGG: YceI family protein YP_003122369.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein YP_003122370.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: pol:Bpro_3898 multi-sensor signal transduction histidine kinase YP_003122372.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; outer membrane efflux protein; KEGG: tbd:Tbd_1327 heavy metal efflux pump CzcA YP_003122373.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: gsu:GSU0829 CzcB family heavy metal efflux protein YP_003122374.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; KEGG: oca:OCAR_7723 cadmium-translocating P-type ATPase YP_003122375.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: sus:Acid_0469 peptidase S9B dipeptidylpeptidase IV subunit YP_003122376.1 PFAM: NmrA family protein; short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1828 NmrA family protein YP_003122377.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rlt:Rleg2_1368 short-chain dehydrogenase/reductase SDR YP_003122378.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_3529 AraC family transcriptional regulator YP_003122379.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aby:ABAYE0223 transcriptional regulator (AraC-like) YP_003122380.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein YP_003122381.1 PFAM: carbonic anhydrase; KEGG: bpy:Bphyt_1090 carbonic anhydrase YP_003122382.1 KEGG: bpy:Bphyt_1089 hypothetical protein YP_003122383.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bpy:Bphyt_1089 hypothetical protein YP_003122385.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ccv:CCV52592_1006 general stress protein 14 (GSP14) YP_003122386.1 PFAM: helix-turn-helix HxlR type; KEGG: rpt:Rpal_3638 transcriptional regulator, HxlR family YP_003122387.1 KEGG: swi:Swit_1900 quinoprotein glucose dehydrogenase; PFAM: cytochrome C class I; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone YP_003122388.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: pol:Bpro_3509 signal transduction histidine kinase YP_003122389.1 PFAM: helix-turn-helix HxlR type; KEGG: bpy:Bphyt_1097 transcriptional regulator, HxlR family YP_003122390.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: har:HEAR0564 NADH-azoreductase AzoR, FMN-dependent YP_003122391.1 KEGG: dal:Dalk_1206 hypothetical protein YP_003122392.1 KEGG: rde:RD1_2497 hypothetical protein YP_003122393.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pla:Plav_2693 NADH:flavin oxidoreductase/NADH oxidase YP_003122394.1 KEGG: pzu:PHZ_c1818 dithiol-disulfide isomerase YP_003122395.1 KEGG: bcz:BCZK4149 hypothetical protein YP_003122396.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003122397.1 PFAM: beta-lactamase; KEGG: bra:BRADO4091 beta-lactamase family protein; 6-aminohexanoate-dimer hydrolase YP_003122398.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003122399.1 PFAM: RNA methylase; KEGG: dde:Dde_1488 hypothetical protein YP_003122400.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: acb:A1S_1476 hypothetical protein YP_003122401.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: aba:Acid345_4484 glycoside hydrolase family 2, TIM barrel YP_003122402.1 PFAM: RagB/SusD domain protein YP_003122403.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122404.1 PFAM: response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; ATP-binding region ATPase domain protein; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sdn:Sden_1699 ATP-binding region, ATPase-like protein YP_003122405.1 PFAM: glycoside hydrolase family 76; Ricin B lectin; KEGG: hypothetical protein YP_003122406.1 TIGRFAM: uracil-DNA glycosylase; PFAM: uracil-DNA glycosylase superfamily; KEGG: ppu:PP_1413 uracil-DNA glycosylase YP_003122407.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: nmu:Nmul_A2107 secretion protein HlyD YP_003122408.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ccs:CCNA_02473 cobalt-zinc-cadmium resistance protein CzcA YP_003122410.1 PFAM: protein of unknown function DUF1543; KEGG: pcr:Pcryo_1420 hypothetical protein YP_003122411.1 KEGG: bce:BC2314 hypothetical protein YP_003122414.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sus:Acid_2894 glycoside hydrolase family protein YP_003122415.1 KEGG: sus:Acid_6537 hypothetical protein YP_003122416.1 KEGG: cak:Caul_2405 hypothetical protein YP_003122417.1 PFAM: alpha-L-rhamnosidase; KEGG: kpe:KPK_2466 alpha-L-rhamnosidase family protein YP_003122418.1 PFAM: protein of unknown function DUF1680; KEGG: pat:Patl_0910 hypothetical protein YP_003122419.1 PFAM: TonB-dependent receptor plug; KEGG: xop:PXO_01318 TonB-dependent outer membrane receptor/Oar-like protein YP_003122420.1 PFAM: TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor YP_003122421.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_4778 sensory box histidine kinase PhoR1 YP_003122422.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dal:Dalk_3609 two component transcriptional regulator, winged helix family YP_003122423.1 PFAM: sulfatase; KEGG: smd:Smed_2065 sulfatase YP_003122424.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003122426.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sus:Acid_3628 AraC family transcriptional regulator YP_003122427.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B0246 transcriptional regulator YP_003122429.1 PFAM: amino acid permease-associated region; KEGG: mpo:Mpop_4969 amino acid permease-associated region YP_003122430.1 PFAM: peptidase S41; hypothetical protein; SMART: peptidase S41; KEGG: vco:VC0395_0089 tricorn protease YP_003122432.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family YP_003122433.1 PFAM: peptidase M56 BlaR1; KEGG: mxa:MXAN_0189 hypothetical protein YP_003122434.1 PFAM: Penicillinase repressor; KEGG: mxa:MXAN_4242 transcriptional regulator YP_003122435.1 PFAM: aminotransferase class I and II; KEGG: bbt:BBta_7471 GntR family transcriptional regulator YP_003122437.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pau:PA14_54120 acyl carrier protein phosphodiesterase YP_003122438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azo:azo3635 acetyltransferase YP_003122439.1 PFAM: ThiJ/PfpI domain protein; KEGG: xca:xccb100_0627 hypothetical protein YP_003122440.1 KEGG: sde:Sde_0704 16S rRNA dimethylase YP_003122441.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mxa:MXAN_6707 glyoxalase family protein YP_003122442.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpt:Bpet3226 AraC family transcriptional regulator YP_003122443.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: pfo:Pfl01_4034 amino acid permease-associated region YP_003122444.1 PFAM: ethanolamine ammonia lyase large subunit; KEGG: pmy:Pmen_2682 ethanolamine ammonia lyase large subunit YP_003122445.1 PFAM: ethanolamine ammonia-lyase light chain; KEGG: pau:PA14_11760 ethanolamine ammonia-lyase small subunit YP_003122446.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: ilo:IL1936 DNA-directed RNA polymerase specialized sigma subunit YP_003122447.1 PFAM: FecR protein; KEGG: nwi:Nwi_0657 FecR protein YP_003122448.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122449.1 KEGG: hypothetical protein YP_003122453.1 PFAM: fibronectin type III domain protein; KEGG: lch:Lcho_3794 fibronectin type III domain- containing protein YP_003122454.1 KEGG: sus:Acid_6881 Ig family protein YP_003122455.1 KEGG: B-box zinc finger family protein YP_003122456.1 PFAM: fibronectin type III domain protein YP_003122457.1 KEGG: dac:Daci_4513 hypothetical protein YP_003122459.1 KEGG: har:HEAR2602 peptide methionine sulfoxide reductase (protein-methionine-S-oxide reductase) (peptide Met(O) reductase); TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_003122460.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; KEGG: bsu:BSU28580 recombination and DNA strand exchange inhibitor protein YP_003122461.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mno:Mnod_4492 transcriptional regulator, MarR family YP_003122462.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_0921 transcriptional regulator, AraC family YP_003122463.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein; KEGG: sat:SYN_02948 acriflavin resistance periplasmic protein YP_003122464.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1 YP_003122465.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sus:Acid_7834 RND efflux system outer membrane lipoprotein YP_003122466.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0826 GNAT family acetyltransferase YP_003122467.1 PFAM: alpha/beta hydrolase; KEGG: psp:PSPPH_3647 lipase YP_003122468.1 PFAM: alpha/beta hydrolase; KEGG: bcb:BCB4264_A1902 EstC YP_003122469.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family YP_003122470.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: pol:Bpro_0515 alkylhydroperoxidase AhpD core YP_003122471.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family YP_003122473.1 PFAM: beta-lactamase; KEGG: bsu:BSU34440 penicillin-binding protein 4* YP_003122475.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: peptidase C14, caspase catalytic subunit P20 YP_003122476.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: cja:CJA_0214 glucan endo-1,3-beta-glucanase, , glu81A YP_003122480.1 KEGG: pfl:PFL_4824 hypothetical protein YP_003122481.1 PFAM: amidohydrolase; amidohydrolase; KEGG: mxa:MXAN_2373 M38 (beta-aspartyl dipeptidase) family protein YP_003122482.1 PFAM: patatin; KEGG: wsu:WS1459 hypothetical protein YP_003122483.1 PFAM: secretory protein; KEGG: smt:Smal_3351 hypothetical protein YP_003122485.1 PFAM: glycoside hydrolase 15-related; KEGG: sus:Acid_2123 glycoside hydrolase 15-related protein YP_003122486.1 PFAM: hypothetical protein; KEGG: sus:Acid_7543 periplasmic component of the Tol biopolymer transport system-like protein YP_003122487.1 KEGG: mlo:mlr2417 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein YP_003122488.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: msl:Msil_3465 transcriptional regulator, AraC family YP_003122489.1 PFAM: alpha/beta hydrolase; KEGG: abu:Abu_1144 alpha/beta hydrolase protein YP_003122491.1 PFAM: helix-turn-helix HxlR type; KEGG: bha:BH0737 cinnamoyl ester hydrolase YP_003122492.1 PFAM: oxidoreductase domain protein; KEGG: bxe:Bxe_C0470 oxidoreductase YP_003122494.1 KEGG: dar:Daro_3599 WD-40 repeat-containing protein YP_003122495.1 KEGG: reu:Reut_A2011 hypothetical protein YP_003122496.1 KEGG: scl:sce7119 serine protease YP_003122497.1 KEGG: mno:Mnod_2529 hypothetical protein YP_003122498.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pap:PSPA7_1717 ECF subfamily RNA polymerase sigma-70 factor YP_003122499.1 PFAM: FecR protein; KEGG: FecR protein YP_003122500.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122501.1 PFAM: RagB/SusD domain protein YP_003122502.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: eck:EC55989_3266 conserved hypothetical protein, ATPase YP_003122503.1 PFAM: abortive infection protein; KEGG: rso:RSc3402 hypothetical protein YP_003122504.1 PFAM: acyltransferase 3; KEGG: swd:Swoo_1561 acyltransferase 3 YP_003122505.1 KEGG: pzu:PHZ_c1866 hypothetical protein YP_003122506.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: mxa:MXAN_0213 transcriptional regulator, AsnC family YP_003122507.1 KEGG: bar:GBAA1404 hypothetical protein YP_003122509.1 KEGG: lpp:lpp0283 hypothetical protein YP_003122510.1 KEGG: mfa:Mfla_2222 secretion protein HlyD YP_003122511.1 KEGG: lpp:lpp0285 hypothetical protein YP_003122512.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pag:PLES_02451 transcriptional regulator YP_003122513.1 PFAM: aldo/keto reductase; KEGG: ent:Ent638_1859 oxidoreductase YP_003122514.1 KEGG: ppg:PputGB1_5419 hypothetical protein YP_003122515.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: ypy:YPK_2547 pyridoxal-dependent decarboxylase YP_003122516.1 PFAM: IucA/IucC family protein; KEGG: eta:ETA_30300 probable alcaligin biosynthesis protein YP_003122517.1 PFAM: IucA/IucC family protein; KEGG: bbr:BB3895 alcaligin biosynthesis protein YP_003122518.1 KEGG: pol:Bpro_1612 creatininase YP_003122519.1 KEGG: sme:SMa2406 RhbD rhizobactin siderophore biosynthesis protein YP_003122520.1 KEGG: she:Shewmr4_1454 L-lysine 6-monooxygenase (NADPH) YP_003122521.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mxa:MXAN_7119 MATE efflux family protein YP_003122522.1 KEGG: aha:AHA_4176 hypothetical protein YP_003122523.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sus:Acid_1363 AMP-dependent synthetase and ligase YP_003122524.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mno:Mnod_8274 TonB-dependent siderophore receptor YP_003122525.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122526.1 PFAM: RagB/SusD domain protein YP_003122527.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein YP_003122528.1 KEGG: ppf:Pput_4538 exodeoxyribonuclease V, gamma subunit YP_003122529.1 PFAM: sulfatase; KEGG: swd:Swoo_3660 sulfatase YP_003122530.1 PFAM: sulfatase; KEGG: sus:Acid_1528 sulfatase YP_003122531.1 KEGG: hypothetical protein YP_003122532.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; helix- turn-helix- domain containing protein AraC type; histidine kinase A domain protein; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein YP_003122533.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003122534.1 KEGG: abn:AB57_3113 biofilm-associated protein YP_003122535.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pag:PLES_16511 sigma-70 factor, ECF subfamily YP_003122536.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor YP_003122537.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122538.1 PFAM: RagB/SusD domain protein YP_003122540.1 PFAM: fibronectin type III domain protein YP_003122541.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: xca:xccb100_1015 exported beta-mannosidase- like glycosidase YP_003122542.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: hypothetical protein YP_003122544.1 KEGG: cja:CJA_3223 phytanoyl-CoA dioxygenase (PhyH) family YP_003122545.1 PFAM: transcription activator effector binding; KEGG: bcb:BCB4264_A5068 DNA-binding protein YobU YP_003122546.1 PFAM: glycoside hydrolase family 43; Ricin B lectin; KEGG: hypothetical protein YP_003122547.1 PFAM: conserved hypothetical protein; KEGG: gox:GOX0847 Rossmann fold nucleotide-binding protein YP_003122548.1 PFAM: protein of unknown function UPF0153; KEGG: sus:Acid_3431 hypothetical protein YP_003122549.1 PFAM: alpha/beta hydrolase; KEGG: mlo:mlr4436 contains similarity to hydrolase YP_003122550.1 PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rso:RSc2322 transcription regulator protein YP_003122551.1 PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU29030 hypothetical protein YP_003122552.1 PFAM: helix-turn-helix HxlR type; KEGG: ban:BA3462 hypothetical protein YP_003122553.1 PFAM: ketopantoate reductase; KEGG: scl:sce9123 oxidoreductase YP_003122555.1 KEGG: eum:ECUMN_3642 cytoplasmic protein YP_003122557.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein YP_003122558.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein YP_003122559.1 PFAM: coagulation factor 5/8 type domain protein YP_003122561.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122562.1 PFAM: FecR protein; KEGG: cak:Caul_1968 anti-FecI sigma factor, FecR YP_003122563.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: rpt:Rpal_0706 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003122564.1 PFAM: NUDIX hydrolase; KEGG: cja:CJA_3063 NUDIX hydrolase YP_003122566.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_0236 oxidoreductase, short chain dehydrogenase/reductase family YP_003122567.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: sus:Acid_2442 short-chain dehydrogenase/reductase SDR YP_003122569.1 KEGG: GG12923 gene product from transcript GG12923- RA YP_003122570.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: maq:Maqu_2826 two component, sigma54 specific, fis family transcriptional regulator YP_003122571.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_1098 short-chain dehydrogenase/reductase SDR YP_003122572.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003122573.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_1708 short-chain dehydrogenase/reductase SDR precursor YP_003122574.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcm:Bcenmc03_6416 short-chain dehydrogenase/reductase SDR YP_003122575.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_0171 cyclic nucleotide-binding protein YP_003122578.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vpa:VP1699 transcriptional regulator ExsA YP_003122579.1 PFAM: OsmC family protein; KEGG: xcv:XCV3060 OsmC-like protein YP_003122580.1 KEGG: sml:Smlt2095 transmembrane protein YP_003122581.1 PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: dno:DNO_0446 RNA recognition motif-containing protein YP_003122583.1 KEGG: mrd:Mrad2831_2744 hypothetical protein YP_003122584.1 KEGG: vco:VC0395_1004 protease YP_003122585.1 KEGG: bba:Bd1800 hypothetical protein YP_003122586.1 PFAM: phosphoglycerate mutase; KEGG: bcr:BCAH187_A4049 phosphoglycerate mutase family protein YP_003122587.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sat:SYN_00775 two-component response regulator YP_003122588.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: reh:H16_A1985 signal transduction histidine kinase containing PAS/PAC sensor domain YP_003122591.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bvi:Bcep1808_0080 MarR family transcriptional regulator YP_003122592.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4302 GntR family transcriptional regulator YP_003122593.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dar:Daro_0401 regulatory protein, ArsR YP_003122594.1 PFAM: regulatory protein TetR; KEGG: dol:Dole_0805 TetR family transcriptional regulator YP_003122595.1 PFAM: outer membrane efflux protein; KEGG: outer membrane secretion protein YP_003122596.1 KEGG: dol:Dole_0807 secretion protein HlyD family protein YP_003122597.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00241 export ABC transporter ATP- binding protein YP_003122598.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_0657 ABC transporter-related protein YP_003122599.1 PFAM: ABC-2 type transporter; KEGG: gme:Gmet_3460 hypothetical protein YP_003122600.1 PFAM: ABC-2 type transporter; KEGG: dol:Dole_0811 ABC-2 type transporter YP_003122601.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: scl:sce5745 transcriptional regulator YP_003122602.1 PFAM: Ada metal-binding domain protein; regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pfo:Pfl01_2158 transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S- methyltransferase YP_003122603.1 PFAM: 8-oxoguanine DNA glycosylase; HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: bcz:BCZK3499 DNA-3-methyladenine glycosidase YP_003122604.1 KEGG: mmw:Mmwyl1_0128 methylated-DNA--protein- cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding YP_003122605.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: spe:Spro_3049 pyridoxal-dependent decarboxylase YP_003122606.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cko:CKO_00983 hypothetical protein YP_003122607.1 PFAM: GCN5-related N-acetyltransferase; KEGG: GCN5-related N-acetyltransferase YP_003122608.1 PFAM: NUDIX hydrolase; KEGG: mmr:Mmar10_1066 NUDIX hydrolase YP_003122609.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bcy:Bcer98_0086 RNA methyltransferase YP_003122610.1 PFAM: pyruvate carboxyltransferase; KEGG: hydroxymethylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase YP_003122611.1 PFAM: GSCFA domain protein; KEGG: hypothetical protein YP_003122612.1 PFAM: amidohydrolase; amidohydrolase; KEGG: aba:Acid345_1826 Pro-Hyp dipeptidase. Metallo peptidase. MEROPS family M38 YP_003122613.1 PFAM: regulatory protein TetR; KEGG: dal:Dalk_2333 transcriptional regulator, TetR family YP_003122615.1 KEGG: hypothetical protein YP_003122618.1 KEGG: sdn:Sden_2209 hypothetical protein YP_003122619.1 KEGG: bra:BRADO4096 hypothetical protein YP_003122621.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr1595 short chain dehydrogenase YP_003122622.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: scl:sce3225 dehydrogenase YP_003122623.1 KEGG: mfa:Mfla_0683 ABC transporter, permease protein YP_003122624.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2644 ABC transporter, ATPase subunit YP_003122626.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122627.1 PFAM: FecR protein; KEGG: rru:Rru_A1439 FecR YP_003122628.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bra:BRADO4891 RNA polymerase sigma factor YP_003122629.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: azo:azo3751 AraC family transcription regulator YP_003122630.1 PFAM: ThiJ/PfpI domain protein; KEGG: bca:BCE_2883 hypothetical protein YP_003122631.1 PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; KEGG: scl:sce1921 endoribonucleases active with either ribo-or deoxyribonucleic acids YP_003122633.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003122634.1 KEGG: mxa:MXAN_2791 protease B YP_003122635.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: xcv:XCV3213 sugar hydrolase YP_003122636.1 PFAM: monooxygenase FAD-binding; KEGG: cak:Caul_0549 monooxygenase FAD-binding YP_003122637.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator YP_003122638.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU03080 hypothetical protein YP_003122639.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; KEGG: bca:BCE_3137 phosphoenolpyruvate synthase YP_003122640.1 PFAM: mechanosensitive ion channel MscS; KEGG: gsu:GSU1723 mechanosensitive ion channel family protein YP_003122641.1 KEGG: gur:Gura_2254 PKD domain-containing protein YP_003122642.1 PFAM: protein of unknown function DUF808; KEGG: tdn:Suden_1370 hypothetical protein YP_003122643.1 PFAM: major facilitator superfamily MFS_1; KEGG: sfv:SFV_2391 hypothetical protein YP_003122644.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator YP_003122645.1 KEGG: ypm:YP_1161 hypothetical protein YP_003122646.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_6519 hypothetical protein YP_003122647.1 TIGRFAM: metal dependent phophohydrolase; KEGG: pfl:PFL_5886 HDIG domain-containing protein YP_003122648.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; PA14 domain protein; sulfatase; metalloenzyme domain protein; SMART: PA14 domain protein; KEGG: spe:Spro_0294 coagulation factor 5/8 type domain-containing protein YP_003122649.1 PFAM: glycoside hydrolase family 43; carbohydrate-binding protein; protein of unknown function DUF1080; SMART: cellulose binding type IV; KEGG: sde:Sde_0216 hypothetical protein YP_003122650.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_04843 histone acetyltransferase HPA2- like acetyltransferase YP_003122651.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003122654.1 KEGG: ajs:Ajs_1029 hypothetical protein YP_003122655.1 PFAM: Domain of unknown function DUF1877; KEGG: dal:Dalk_5077 domain of unknown function DUF1877 YP_003122656.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_3505 ABC transporter, permease protein YP_003122657.1 PFAM: alpha/beta hydrolase; KEGG: sml:Smlt4512 exported protease YP_003122658.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1690 hypothetical protein YP_003122659.1 KEGG: bcr:BCAH187_A0210 hypothetical protein YP_003122660.1 KEGG: hypothetical protein YP_003122662.1 PFAM: fatty acid desaturase; KEGG: sus:Acid_2401 delta-9 acyl-phospholipid desaturase YP_003122666.1 KEGG: pmr:PMI1466 fimbrial outer membrane usher protein YP_003122669.1 KEGG: hypothetical protein YP_003122670.1 KEGG: noc:Noc_1844 hypothetical protein YP_003122672.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: bba:Bd2344 hypothetical protein YP_003122673.1 PFAM: patatin; KEGG: pau:PA14_20870 hypothetical protein YP_003122674.1 PFAM: tRNA-hydroxylase; KEGG: ade:Adeh_0296 tRNA-(MS(2)IO(6)A)-hydroxylase- like YP_003122675.1 PFAM: aminotransferase class I and II; aminotransferase class-III; glycine hydroxymethyltransferase; aminotransferase class V; KEGG: aminotransferase YP_003122676.1 PFAM: peptidase S45 penicillin amidase; KEGG: bce:BC3254 penicillin acylase II YP_003122677.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase YP_003122679.1 KEGG: bcr:BCAH187_A1096 hypothetical protein YP_003122680.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ypm:YP_2632 two-component sensor histidine kinase YP_003122682.1 KEGG: similar to KIAA0619 protein; K04514 Rho- associated, coiled-coil containing protein kinase YP_003122683.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003122685.1 KEGG: hypothetical protein YP_003122687.1 KEGG: pag:PLES_44931 hypothetical protein YP_003122688.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: aba:Acid345_0287 polysaccharide deacetylase YP_003122689.1 KEGG: ecv:APECO1_O1CoBM78 hypothetical protein YP_003122690.1 KEGG: plu:plu0598 hypothetical protein YP_003122691.1 PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: esa:ESA_00785 hypothetical protein YP_003122692.1 KEGG: mes:Meso_4410 competence protein YP_003122693.1 PFAM: integrase catalytic region; KEGG: gdi:GDI2757 integrase YP_003122694.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sfu:Sfum_1456 RND efflux system, outer membrane lipoprotein, NodT family YP_003122695.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1 YP_003122696.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pmr:PMI0132 multidrug efflux protein YP_003122697.1 PFAM: protein of unknown function DUF420; KEGG: bsu:BSU19140 hypothetical protein YP_003122698.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: esa:ESA_02984 hypothetical protein YP_003122699.1 PFAM: DoxX family protein; KEGG: afw:Anae109_4189 DoxX family protein YP_003122700.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: slo:Shew_0949 redoxin domain-containing protein YP_003122701.1 KEGG: ilo:IL0782 hypothetical protein YP_003122703.1 KEGG: hypothetical protein YP_003122704.1 KEGG: hypothetical protein YP_003122708.1 KEGG: Os10g0497900; hypothetical protein YP_003122710.1 KEGG: reu:Reut_A2922 hypothetical protein YP_003122713.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; K03564 peroxiredoxin Q/BCP YP_003122714.1 PFAM: hypothetical protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: mmw:Mmwyl1_0941 helix-turn-helix type 11 domain-containing protein YP_003122715.1 PFAM: ABC transporter related; KEGG: acb:A1S_1749 ABC transporter-like protein YP_003122716.1 PFAM: helix-turn-helix HxlR type; KEGG: smt:Smal_2474 transcriptional regulator, HxlR family YP_003122717.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: reh:H16_B1990 oxidoreductase YP_003122718.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: reu:Reut_B5135 metal-dependent phosphohydrolase YP_003122719.1 PFAM: alpha/beta hydrolase; KEGG: hch:HCH_03068 lysophospholipase YP_003122720.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bav:BAV1125 RNA polymerase sigma-E factor YP_003122721.1 PFAM: FecR protein; KEGG: abu:Abu_1453 sigma factor regulatory protein FecR/PupR family YP_003122722.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122723.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003122725.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2644 ABC transporter, ATPase subunit YP_003122726.1 KEGG: mca:MCA3077 ABC transporter, permease protein YP_003122727.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: sdy:SDY_2933 DNA mismatch repair protein YP_003122728.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: bba:Bd2912 MutS-like mismatch repair protein, ATPase YP_003122729.1 PFAM: peptidase M16 domain protein; KEGG: hypothetical protein YP_003122730.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein YP_003122731.1 PFAM: cyclic nucleotide-binding; KEGG: vvu:VV1_0729 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase YP_003122732.1 KEGG: xca:xccb100_4315 lactoylglutathione lyase YP_003122734.1 KEGG: vpa:VP2715 aspartate kinase III; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003122735.1 PFAM: inositol phosphatase/fructose-16- bisphosphatase; KEGG: vfi:VF_0264 fructose-1,6-bisphosphatase YP_003122736.1 PFAM: SCP-like extracellular; KEGG: lpf:lpl0910 hypothetical protein YP_003122737.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0284 ABC transporter, ATPase subunit YP_003122738.1 KEGG: bca:BCE_2729 metal-dependent hydrolase YP_003122739.1 PFAM: NUDIX hydrolase; KEGG: hydrolase protein YP_003122740.1 KEGG: gur:Gura_3277 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein YP_003122742.1 KEGG: ngk:NGK_1616 TonB YP_003122743.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_4255 major facilitator transporter YP_003122744.1 PFAM: Radical SAM domain protein; KEGG: sfu:Sfum_1766 radical SAM domain protein YP_003122746.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: bba:Bd0356 arginase (fragment) YP_003122747.1 KEGG: mag:amb4199 cytochrome C biogenesis protein CcmE YP_003122748.1 PFAM: cytochrome C assembly protein; KEGG: mgm:Mmc1_3502 cytochrome C assembly protein YP_003122749.1 KEGG: gdj:Gdia_1187 hypothetical protein YP_003122752.1 KEGG: hslU; heat shock protein HslVU, ATPase subunit HslU YP_003122753.1 PFAM: LmbE family protein; KEGG: hypothetical protein YP_003122755.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mxa:MXAN_1564 alkyl hydroperoxide reductase C YP_003122756.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: bid:Bind_2431 alkylhydroperoxidase YP_003122757.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: nmu:Nmul_A2139 ribosomal protein L28 YP_003122758.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: predicted protein YP_003122760.1 KEGG: gsu:GSU1132 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_003122761.1 KEGG: mxa:MXAN_4411 JmjC domain protein YP_003122762.1 KEGG: mxa:MXAN_1476 MiaB-like tRNA modifying enzyme YliG, TIGR01125; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB YP_003122763.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dal:Dalk_0137 DEAD/DEAH box helicase domain protein YP_003122764.1 KEGG: sfu:Sfum_3451 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase all-beta; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003122765.1 KEGG: ade:Adeh_2141 hypothetical protein YP_003122766.1 PFAM: MORN variant repeat protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003122767.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: nis:NIS_1417 PAP2 family phosphoesterase YP_003122768.1 KEGG: xcb:XC_1289 hypothetical protein YP_003122769.1 PFAM: glycoside hydrolase family 31; KEGG: aba:Acid345_0650 alpha-glucosidase YP_003122770.1 KEGG: mmr:Mmar10_0295 oxidoreductase YP_003122771.1 PFAM: two component regulator three Y domain protein; histidine kinase dimerisation and phosphoacceptor region; two component regulator propeller; ATP-binding region ATPase domain protein; KEGG: cps:CPS_2607 GGDEF domain-containing protein YP_003122772.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: aba:Acid345_4290 two component transcriptional regulator, LuxR family YP_003122775.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_003122776.1 PFAM: Domain of unknown function DUF1835; KEGG: bat:BAS2610 hypothetical protein YP_003122778.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_003122781.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: aba:Acid345_3809 D-alpha,beta-D-heptose 1,7- bisphosphate phosphatase YP_003122782.1 PFAM: Nucleotidyl transferase; KEGG: cje:Cj1423c D-glycero-D-manno- heptose 1-phosphate guanosyltransferase YP_003122783.1 KEGG: tdn:Suden_0573 phosphoheptose isomerase YP_003122784.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: net:Neut_0157 GHMP kinase YP_003122785.1 PFAM: glycosyl transferase group 1; KEGG: mch:Mchl_4250 glycosyl transferase group 1 YP_003122786.1 PFAM: glycosyl transferase family 2; KEGG: scl:sce7385 undecaprenol glycosyltransferase YP_003122787.1 KEGG: msl:Msil_3207 hypothetical protein YP_003122788.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: gsu:GSU1272 dihydroorotase, multifunctional complex type YP_003122790.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; regulatory protein LuxR; KEGG: psb:Psyr_4731 RNA polymerase sigma factor YP_003122791.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family YP_003122792.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122793.1 PFAM: RagB/SusD domain protein YP_003122794.1 PFAM: alpha-N-acetylglucosaminidase; KEGG: predicted protein; K01205 alpha-N- acetylglucosaminidase YP_003122795.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A3428 hypothetical protein YP_003122796.1 PFAM: phospholipase/carboxylesterase; KEGG: pap:PSPA7_0646 hypothetical protein YP_003122797.1 PFAM: glycosyl transferase family 2; KEGG: scl:sce4866 integral membrane glycosyltransferase YP_003122798.1 KEGG: xca:xccb100_3615 secreted protein YP_003122799.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: sal:Sala_0294 glucose-methanol-choline oxidoreductase YP_003122800.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bra:BRADO3944 oxidoreductase NAD(P)-binding subunit YP_003122801.1 PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_0101 PepSY-associated TM helix YP_003122802.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: ppg:PputGB1_2303 TonB-dependent siderophore receptor YP_003122803.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: sus:Acid_0661 methyltransferase type 11 YP_003122804.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003122805.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR YP_003122808.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_2442 short-chain dehydrogenase/reductase SDR YP_003122809.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cju:C8J_0979 transcriptional regulatory protein YP_003122810.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: similar to short-chain dehydrogenase YP_003122811.1 PFAM: two component regulator propeller; KEGG: dol:Dole_0790 two component regulator propeller domain-containing protein YP_003122812.1 PFAM: transcriptional regulator domain protein; KEGG: rsq:Rsph17025_2788 two component transcriptional regulator YP_003122813.1 KEGG: mes:Meso_4410 competence protein YP_003122814.1 PFAM: metallophosphoesterase; KEGG: smt:Smal_1191 metallophosphoesterase YP_003122815.1 PFAM: RagB/SusD domain protein YP_003122816.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122817.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bsu:BSU18010 hypothetical protein YP_003122822.1 PFAM: lanthionine synthetase C family protein; tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: hypothetical protein YP_003122824.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vpa:VP1699 transcriptional regulator ExsA YP_003122826.1 PFAM: FecR protein; KEGG: pmr:PMI3707 FecR-like transcriptional regulator YP_003122827.1 PFAM: rhomboid family protein; KEGG: shw:Sputw3181_3263 rhomboid family protein YP_003122828.1 PFAM: FecR protein; KEGG: pap:PSPA7_2872 transmembrane sensor YP_003122829.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sus:Acid_7860 ECF subfamily RNA polymerase sigma-24 factor YP_003122831.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sde:Sde_2982 hypothetical protein YP_003122832.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122833.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003122834.1 KEGG: hypothetical protein YP_003122837.1 KEGG: dps:DP1016 methylamine utilization protein YP_003122838.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rpb:RPB_0210 AraC family transcriptional regulator YP_003122841.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: met:M446_1526 multi-sensor hybrid histidine kinase YP_003122842.1 PFAM: UbiA prenyltransferase; KEGG: hypothetical protein YP_003122851.1 KEGG: hypothetical protein YP_003122853.1 KEGG: mno:Mnod_2545 hypothetical protein YP_003122854.1 KEGG: hypothetical protein YP_003122856.1 KEGG: Viral A-type inclusion protein repeat containing protein YP_003122858.1 KEGG: mno:Mnod_7498 pentapeptide repeat protein YP_003122859.1 KEGG: hypothetical protein YP_003122860.1 PFAM: UvrD/REP helicase; KEGG: reh:PHG167 helicase, superfamily I YP_003122861.1 KEGG: pmr:PMI2435 plasmid-related protein YP_003122862.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003122863.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003122864.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122865.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily YP_003122866.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family YP_003122867.1 KEGG: hypothetical protein LOC100025200 YP_003122868.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003122869.1 KEGG: hypothetical protein LOC691250 YP_003122871.1 KEGG: hypothetical protein LOC690964 YP_003122872.1 PFAM: FecR protein; KEGG: pen:PSEEN0275 FecR-like transmembrane sensor YP_003122873.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily YP_003122874.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122875.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003122879.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: sde:Sde_1442 sigma-24 (FecI-like) YP_003122881.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003122882.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122883.1 KEGG: GJ16154 gene product from transcript GJ16154- RA YP_003122884.1 KEGG: GJ16154 gene product from transcript GJ16154- RA YP_003122885.1 KEGG: hypothetical protein LOC685035 YP_003122886.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003122887.1 KEGG: conserved hypothetical protein YP_003122888.1 PFAM: FecR protein; KEGG: sde:Sde_1443 transcriptional regulator YP_003122889.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sigK; sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily YP_003122891.1 KEGG: pna:Pnap_0002 hypothetical protein YP_003122893.1 KEGG: lpf:lpl1015 hypothetical protein YP_003122894.1 KEGG: afe:Lferr_1304 domain of unknown function DUF1738 YP_003122897.1 KEGG: eci:UTI89_C1147 hypothetical protein YP_003122901.1 KEGG: pol:Bpro_5066 hypothetical protein YP_003122902.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bac:BamMC406_6523 UBA/ThiF-type NAD/FAD binding protein YP_003122903.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sus:Acid_0850 DNA-directed DNA polymerase YP_003122904.1 KEGG: pca:Pcar_1741 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit YP_003122906.1 KEGG: ppg:PputGB1_1623 hypothetical protein YP_003122908.1 KEGG: nwi:Nwi_0998 hypothetical protein YP_003122910.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; KEGG: DNA ligase D; K01971 DNA ligase (ATP) YP_003122916.1 PFAM: integrase family protein; KEGG: seh:SeHA_C1600 phage integrase family protein YP_003122918.1 PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; KEGG: ccs:CCNA_00579 endonuclease YP_003122919.1 KEGG: bur:Bcep18194_B1124 hypothetical protein YP_003122920.1 KEGG: sew:SeSA_A4040 outer membrane protein YP_003122921.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: smd:Smed_5848 activator of HSP90 ATPase 1 family protein YP_003122922.1 PFAM: regulatory protein TetR; KEGG: glo:Glov_3436 transcriptional regulator, TetR family YP_003122923.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcb:BCB4264_A2986 glyoxalase family protein YP_003122924.1 KEGG: pat:Patl_3535 hypothetical protein YP_003122925.1 PFAM: protein of unknown function DUF1200; KEGG: bcr:BCAH187_A1389 lipoprotein YP_003122926.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: cps:CPS_2411 hypothetical protein YP_003122928.1 KEGG: nmc:NMC0604 hypothetical protein YP_003122930.1 KEGG: xop:PXO_01318 TonB-dependent outer membrane receptor/Oar-like protein YP_003122931.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: afw:Anae109_1121 outer membrane chaperone Skp (OmpH) YP_003122932.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rec:RHECIAT_PC0000502 probable alpha-L- fucosidase protein YP_003122933.1 PFAM: YceI family protein YP_003122934.1 KEGG: pcr:Pcryo_1258 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003122935.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein YP_003122936.1 PFAM: PfkB domain protein; KEGG: afw:Anae109_2948 ribokinase-like domain- containing protein YP_003122937.1 PFAM: glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: bsu:BSU27030 levanase YP_003122938.1 PFAM: glycosyl transferase family 8; KEGG: aha:AHA_4170 glycosyl transferase family protein YP_003122939.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003122940.1 PFAM: NHL repeat containing protein; KEGG: hypothetical protein YP_003122941.1 KEGG: bba:Bd2515 sec-independent protein translocase protein TatC YP_003122943.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; KEGG: sfu:Sfum_3445 transcriptional regulator, Crp/Fnr family YP_003122945.1 PFAM: esterase; KEGG: sml:Smlt3697 ferric-enterobactin hydrolase YP_003122947.1 KEGG: kpe:KPK_0007 outer membrane protein, OMP85 family YP_003122948.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family YP_003122949.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rde:RD1_1136 hypothetical protein YP_003122950.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1303 hypothetical protein YP_003122952.1 PFAM: methyltransferase type 12; KEGG: aba:Acid345_1976 methyltransferase type 12 YP_003122953.1 PFAM: metallophosphoesterase; KEGG: aba:Acid345_1977 metallophosphoesterase YP_003122954.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ppg:PputGB1_0699 ECF subfamily RNA polymerase sigma-24 factor YP_003122955.1 PFAM: FecR protein; KEGG: psp:PSPPH_2117 FecR protein superfamily protein YP_003122956.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003122960.1 PFAM: redoxin; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gbm:Gbem_3412 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003122961.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bra:BRADO2376 amine oxidase (flavin- containing) YP_003122964.1 PFAM: sulfatase; KEGG: swd:Swoo_3661 sulfatase YP_003122965.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: sus:Acid_5957 glycoside hydrolase family protein YP_003122966.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003122967.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_0589 short-chain dehydrogenase/reductase SDR YP_003122969.1 PFAM: regulatory protein TetR; KEGG: bcz:BCZK2985 TetR family transcriptional regulator YP_003122970.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR YP_003122973.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator YP_003122975.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bsu:BSU08210 hypothetical protein YP_003122976.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bce:BC2372 multidrug ABC transporter permease/ATP-binding protein YP_003122977.1 PFAM: protein of unknown function DUF1634; KEGG: aba:Acid345_3911 protein of unknown function DUF1634 YP_003122978.1 PFAM: protein of unknown function DUF81; KEGG: aba:Acid345_3912 protein of unknown function DUF81 YP_003122979.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pau:PA14_43480 GntR family transcriptional regulator YP_003122980.1 PFAM: fatty acid desaturase; KEGG: mxa:MXAN_6306 fatty acid desaturase family protein YP_003122981.1 PFAM: protein of unknown function DUF477; KEGG: bpt:Bpet4154 hypothetical protein YP_003122982.1 PFAM: protein of unknown function DUF140; KEGG: rce:RC1_1579 ABC transporter permease protein YP_003122983.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd3806 ABC-type organic solvent resistance transport system ATP-binding protein YP_003122984.1 PFAM: hypothetical protein; KEGG: aba:Acid345_4517 mammalian cell entry related YP_003122985.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: pat:Patl_0797 alcohol dehydrogenase GroES- like protein YP_003122986.1 KEGG: mxa:MXAN_2499 hypothetical protein YP_003122988.1 PFAM: sulfatase; KEGG: sal:Sala_1013 sulfatase YP_003122989.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aeh:Mlg_1802 GAF sensor signal transduction histidine kinase YP_003122991.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B1396 acyl-CoA dehydrogenase YP_003122993.1 PFAM: YceI family protein; KEGG: rso:RSc2718 signal peptide protein YP_003122994.1 PFAM: YceI family protein; KEGG: gme:Gmet_3449 YceI YP_003122995.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B1021 transcriptional regulator YP_003122996.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: predicted protein YP_003122997.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pae:PA0658 short-chain dehydrogenase YP_003122998.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: tcx:Tcr_0170 hypothetical protein YP_003122999.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: vpa:VPA0946 hypothetical protein YP_003123000.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: aba:Acid345_2954 transcriptional regulator, MarR family YP_003123001.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: bba:Bd2267 potassium/proton antiporter YP_003123002.1 KEGG: mxa:MXAN_2791 protease B YP_003123004.1 KEGG: vvy:VVA0934 methylase of chemotaxis methyl- accepting protein; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_003123005.1 PFAM: CheB methylesterase; KEGG: swd:Swoo_1963 CheB methylesterase YP_003123006.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sus:Acid_2047 PAS/PAC sensor hybrid histidine kinase YP_003123007.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; RND efflux system, outer membrane lipoprotein, NodT family; PFAM: acriflavin resistance protein; outer membrane efflux protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1 YP_003123008.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_0374 secretion protein HlyD YP_003123011.1 KEGG: sun:SUN_0406 hypothetical protein YP_003123013.1 KEGG: predicted protein YP_003123014.1 PFAM: SH3 type 3 domain protein; protein of unknown function DUF1058; KEGG: hypothetical protein YP_003123015.1 PFAM: transport-associated; KEGG: reu:Reut_A1220 transport-associated protein YP_003123016.1 KEGG: clp-1; CaLPain family YP_003123018.1 PFAM: protein of unknown function DUF59; KEGG: jan:Jann_2523 hypothetical protein YP_003123019.1 PFAM: Fe-S metabolism associated SufE; KEGG: bba:Bd1961 regulator of cysteine desulfurase activity YP_003123020.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sus:Acid_7702 cysteine desulfurase YP_003123021.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: csa:Csal_1235 FeS assembly protein SufD YP_003123022.1 KEGG: mxa:MXAN_1154 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase YP_003123023.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: lpc:LPC_2698 cysteine desulfurase activator complex subunit SufB YP_003123024.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bba:Bd1193 scaffold protein for iron-sulfur cluster assembly YP_003123025.1 PFAM: NADPH-dependent FMN reductase; KEGG: pzu:PHZ_c3297 NADPH-dependent FMN reductase family protein YP_003123026.1 KEGG: bmv:BMASAVP1_0030 hypothetical protein YP_003123027.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mxa:MXAN_5504 hypothetical protein YP_003123028.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bmv:BMASAVP1_A1914 phosphinothricin acetyltransferase YP_003123029.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003123030.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_1889 transport protein YP_003123031.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4205 transcriptional regulator, AraC family YP_003123035.1 KEGG: GL17948 gene product from transcript GL17948- RA YP_003123036.1 TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: sfu:Sfum_0287 UbiD family decarboxylases YP_003123038.1 TIGRFAM: peptide chain release factor 3; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; KEGG: glo:Glov_2819 peptide chain release factor 3 YP_003123039.1 PFAM: protein of unknown function DUF214; KEGG: afw:Anae109_4297 hypothetical protein YP_003123040.1 KEGG: pca:Pcar_1850 O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_003123041.1 PFAM: methyltransferase small; RNA methylase; KEGG: plu:plu3348 hypothetical protein YP_003123042.1 PFAM: alanine dehydrogenase; KEGG: Aass; aminoadipate-semialdehyde synthase; K00291 saccharopine dehydrogenase (NADP+, L-lysine forming) YP_003123043.1 PFAM: alpha/beta hydrolase; KEGG: pfo:Pfl01_3998 esterase/lipase/thioesterase YP_003123044.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator YP_003123045.1 KEGG: pfl:PFL_4918 lipoprotein YP_003123046.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase; KEGG: sme:SMc00956 exodeoxyribonuclease III protein YP_003123048.1 KEGG: pla:Plav_2531 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_003123049.1 KEGG: mag:amb2999 nucleotidyltransferase/DNA polymerase involved in DNA repair YP_003123050.1 KEGG: pla:Plav_2527 hypothetical protein YP_003123051.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vsp:VS_II1368 transcriptional regulator, AraC family YP_003123052.1 KEGG: spe:Spro_1020 hypothetical protein YP_003123053.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003123054.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL3451 short-chain dehydrogenase/reductase YP_003123055.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bvi:Bcep1808_5560 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003123056.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aby:ABAYE0223 transcriptional regulator (AraC-like) YP_003123057.1 PFAM: amidohydrolase; KEGG: reh:H16_B1942 hypothetical protein YP_003123059.1 KEGG: ccs:CCNA_00858 TonB-dependent receptor YP_003123060.1 PFAM: lantibiotic dehydratase; KEGG: hypothetical protein YP_003123062.1 PFAM: peptidase S41; KEGG: amc:MADE_03133 hypothetical protein YP_003123063.1 PFAM: histidine kinase internal region; KEGG: maq:Maqu_0489 histidine kinase internal region YP_003123064.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein YP_003123065.1 PFAM: lanthionine synthetase C family protein; KEGG: hypothetical protein YP_003123066.1 PFAM: NGN domain protein; KEGG: sus:Acid_4660 NusG antitermination factor YP_003123067.1 TIGRFAM: amino acid adenylation protein; HAD- superfamily phosphatase, subfamily IIIC; methyltransferase FkbM family; FkbH like protein; PFAM: AMP-dependent synthetase and ligase; glyoxalase/bleomycin resistance protein/dioxygenase; alcohol acetyltransferase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase YP_003123068.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: sdn:Sden_3534 amino acid adenylation YP_003123069.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: sdn:Sden_3534 amino acid adenylation YP_003123070.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: ppu:PP_4222 SyrP protein YP_003123071.1 TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: sdn:Sden_3533 asparagine synthase, glutamine- hydrolyzing YP_003123072.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: vfm:VFMJ11_1642 aspartate racemase YP_003123073.1 TIGRFAM: methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit; KEGG: ecm:EcSMS35_0750 methylaspartate mutase, E subunit YP_003123074.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: sdn:Sden_3534 amino acid adenylation YP_003123075.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: reh:H16_B1688 pyoverdine biosynthesis regulatory gene YP_003123076.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; methyltransferase type 11; taurine catabolism dioxygenase TauD/TfdA; methyltransferase type 12; phosphopantetheine- binding; condensation domain protein; KEGG: bsu:BSU03490 surfactin synthetase YP_003123077.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bsu:BSU03490 surfactin synthetase YP_003123078.1 PFAM: condensation domain protein; KR domain protein; beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bte:BTH_II1235 JamP YP_003123079.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: cko:CKO_00862 hypothetical protein YP_003123080.1 KEGG: cko:CKO_00863 hypothetical protein YP_003123081.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: lpp:lpp1922 hypothetical protein YP_003123082.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: sat:SYN_01149 3-oxoacyl-[acyl-carrier- protein] synthase III YP_003123083.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: nmu:Nmul_A2515 FkbH domain-containing protein YP_003123084.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: bsu:BSU03490 surfactin synthetase YP_003123085.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: ppd:Ppro_1743 malonyl CoA-acyl carrier protein transacylase YP_003123086.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; beta- ketoacyl synthase; aminotransferase class-III; phosphopantetheine-binding; condensation domain protein; KEGG: rso:RS05860 peptide synthetase protein YP_003123087.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: bcb:BCB4264_A2463 bacitracin synthetase 1 YP_003123088.1 KEGG: hch:HCH_02804 ABC-type siderophore export system, fused ATPase and permease components; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_003123089.1 PFAM: thioesterase; KEGG: bcz:BCZK1713 thioesterase YP_003123090.1 PFAM: beta-lactamase domain protein; KEGG: rso:RS03728 hypothetical protein YP_003123091.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: ajs:Ajs_3071 4'-phosphopantetheinyl transferase YP_003123092.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor YP_003123093.1 PFAM: peptidase M1 membrane alanine aminopeptidase; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mxa:MXAN_0644 peptidase, M1 (aminopeptidase N) family YP_003123094.1 PFAM: carbamoyltransferase; KEGG: dal:Dalk_4455 carbamoyltransferase YP_003123096.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: glo:Glov_1631 drug resistance transporter, EmrB/QacA subfamily YP_003123098.1 PFAM: cyclase/dehydrase; KEGG: cyclase/dehydrase YP_003123099.1 Catalyzes the rate-limiting step in dNTP synthesis YP_003123100.1 PFAM: ribonucleotide reductase; KEGG: dno:DNO_0608 ribonucleotide reductase, beta subunit YP_003123101.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003123102.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: mes:Meso_2206 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003123104.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rru:Rru_A0867 peptidase C14, caspase catalytic subunit P20 YP_003123105.1 PFAM: hypothetical protein; peptidase C14 caspase catalytic subunit p20; SMART: hypothetical protein; KEGG: hypothetical protein YP_003123106.1 PFAM: glycosyl hydrolase family 32 domain protein; KEGG: hypothetical protein YP_003123107.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bba:Bd2664 FMN oxidoreductase YP_003123108.1 KEGG: noc:Noc_1844 hypothetical protein YP_003123109.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bha:BH3641 transcriptional regulator YP_003123110.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bba:Bd1534 methylmalonate-semialdehyde dehydrogenase YP_003123111.1 PFAM: aminotransferase class-III; KEGG: kpn:KPN_00577 hypothetical protein YP_003123112.1 TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: scl:sce4721 allantoin permease YP_003123113.1 TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; amidohydrolase; KEGG: sus:Acid_7659 dihydropyrimidinase YP_003123114.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: scl:sce6400 hypothetical protein YP_003123115.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI1502 oxidoreductase YP_003123116.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines YP_003123117.1 KEGG: sus:Acid_6235 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_003123118.1 KEGG: xcv:XCV2823 TonB-dependent outer membrane receptor YP_003123119.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family YP_003123120.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: cps:CPS_4364 ECF subfamily RNA polymerase sigma factor YP_003123123.1 PFAM: methyladenine glycosylase; KEGG: nma:NMA1931 DNA-3-methyladenine glycosylase I YP_003123124.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: tbd:Tbd_1948 flavodoxin reductase YP_003123126.1 PFAM: helix-turn-helix HxlR type; KEGG: aci:ACIAD1453 hypothetical protein YP_003123127.1 KEGG: bpe:BP2606 hypothetical protein YP_003123128.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2118 signal transduction histidine kinase YP_003123131.1 SMART: hypothetical protein; KEGG: sus:Acid_2625 PA14 domain-containing protein YP_003123132.1 PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_A4959 hypothetical protein YP_003123133.1 PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd0693 major facilitator transporter YP_003123134.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003123135.1 PFAM: K potassium transporter; KEGG: lpc:LPC_1572 Kup system potassium uptake protein YP_003123136.1 KEGG: msl:Msil_3083 hypothetical protein YP_003123137.1 KEGG: efe:EFER_3105 5-methylcytosine- specific restriction enzyme with GTPase activity YP_003123138.1 KEGG: ypk:y3796 hypothetical protein YP_003123140.1 KEGG: pna:Pnap_4437 hypothetical protein YP_003123141.1 KEGG: scl:sce5685 serine protease YP_003123142.1 SMART: phospholipase D/transphosphatidylase; KEGG: rpe:RPE_4643 phospholipase D/transphosphatidylase YP_003123143.1 KEGG: scl:sce2229 glutamyl endopeptidase YP_003123144.1 KEGG: glo:Glov_2329 metal dependent phosphohydrolase YP_003123146.1 PFAM: YiaAB two helix domain protein; KEGG: sml:Smlt0452 transmembrane protein YP_003123148.1 KEGG: aby:ABAYE2461 hypothetical protein YP_003123149.1 PFAM: helix-turn-helix HxlR type; KEGG: pub:SAR11_0860 transcription regulator YP_003123150.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2727 hypothetical protein YP_003123151.1 PFAM: protein of unknown function DUF1486; KEGG: afw:Anae109_1067 hypothetical protein YP_003123152.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase YP_003123155.1 PFAM: peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; KEGG: bra:BRADO1254 hypothetical protein YP_003123156.1 KEGG: sfr:Sfri_2538 hypothetical protein YP_003123157.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase YP_003123158.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: cak:Caul_5271 ethyl tert-butyl ether degradation EthD YP_003123159.1 PFAM: regulatory protein TetR; KEGG: vsp:VS_0381 transcriptional regulator YP_003123160.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbd:CBUD_0854 ABC transporter ATP-binding protein YP_003123162.1 PFAM: cupin; KEGG: glo:Glov_2380 cupin 2 conserved barrel domain protein YP_003123166.1 KEGG: pnu:Pnuc_1696 hypothetical protein YP_003123170.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pap:PSPA7_6075 transcriptional regulator YP_003123173.1 KEGG: pol:Bpro_4977 hypothetical protein YP_003123174.1 KEGG: pol:Bpro_4976 hypothetical protein YP_003123177.1 KEGG: sun:SUN_2264 hypothetical protein YP_003123178.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase YP_003123179.1 KEGG: bcu:BCAH820_1018 hypothetical protein YP_003123180.1 KEGG: abu:Abu_0109 hypothetical protein YP_003123181.1 PFAM: integrase catalytic region; KEGG: rms:RMA_0748 transposase YP_003123182.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase YP_003123184.1 KEGG: abu:Abu_0794 two-component sensor histidine kinase YP_003123188.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase YP_003123189.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bca:BCE_2770 oxidoreductase, zinc-binding YP_003123190.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003123193.1 PFAM: sodium/hydrogen exchanger; KEGG: dal:Dalk_1995 sodium/hydrogen exchanger YP_003123194.1 KEGG: ccv:CCV52592_0768 hypothetical protein YP_003123195.1 PFAM: aminoglycoside phosphotransferase; Choline/ethanolamine kinase; KEGG: sus:Acid_4768 aminoglycoside phosphotransferase YP_003123196.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rfr:Rfer_0178 MarR family transcriptional regulator YP_003123197.1 PFAM: helix-turn-helix HxlR type; KEGG: dal:Dalk_2971 transcriptional regulator, HxlR family YP_003123198.1 KEGG: met:M446_5919 esterase YP_003123199.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aby:ABAYE0223 transcriptional regulator (AraC-like) YP_003123200.1 PFAM: major facilitator superfamily MFS_1; KEGG: cbg:CbuG_1638 multidrug resistance transporter, Bcr family YP_003123201.1 PFAM: carbohydrate-binding protein; SMART: cellulose binding type IV; beta and gamma crystallin; KEGG: cja:CJA_0276 carbohydrate binding protein, , cbp6B YP_003123202.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator YP_003123203.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123204.1 PFAM: RagB/SusD domain protein YP_003123205.1 KEGG: scl:sce1308 Terpenoid cylases/protein prenyltransferase-domain-containing protein YP_003123206.1 PFAM: Na+/solute symporter; KEGG: vsp:VS_1241 sodium/substrate symport YP_003123207.1 KEGG: hypothetical protein YP_003123209.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tgr:Tgr7_2587 GCN5-related N- acetyltransferase YP_003123210.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bxe:Bxe_B1426 (acyl-carrier protein) phosphodiesterase YP_003123211.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: afw:Anae109_3146 alkylhydroperoxidase YP_003123212.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: nwi:Nwi_0881 GntR family transcriptional regulator YP_003123213.1 KEGG: bsu:BSU36460 hypothetical protein YP_003123215.1 KEGG: sus:Acid_1173 alpha/beta hydrolase YP_003123216.1 PFAM: metallophosphoesterase; KEGG: cja:CJA_1573 Ser/Thr protein phosphatase family protein family YP_003123217.1 KEGG: hypothetical protein YP_003123218.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123219.1 PFAM: FecR protein; KEGG: smt:Smal_2017 anti-FecI sigma factor, FecR YP_003123220.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rpt:Rpal_0551 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003123221.1 KEGG: scl:sce7119 serine protease YP_003123222.1 KEGG: scl:sce7152 hypothetical protein YP_003123224.1 KEGG: SLEI family protein YP_003123225.1 PFAM: Protein of unknown function DUF1963; leucine- rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: son:SO_0350 hypothetical protein YP_003123226.1 KEGG: eli:ELI_10520 hypothetical protein YP_003123227.1 PFAM: protein of unknown function DUF752; KEGG: slo:Shew_3321 hypothetical protein YP_003123231.1 KEGG: smt:Smal_2072 hypothetical protein YP_003123234.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: bcb:BCB4264_A2073 glycosyltransferase, MGT family YP_003123235.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator YP_003123236.1 KEGG: sus:Acid_3488 hypothetical protein YP_003123237.1 PFAM: regulatory protein TetR; KEGG: pfl:PFL_2927 TetR family transcriptional regulator YP_003123239.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein; KEGG: rme:Rmet_1701 secretion protein HlyD YP_003123240.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: aha:AHA_2960 RND efflux transporter YP_003123241.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sfu:Sfum_1456 RND efflux system, outer membrane lipoprotein, NodT family YP_003123243.1 KEGG: sfu:Sfum_2019 hypothetical protein YP_003123244.1 KEGG: sfu:Sfum_2019 hypothetical protein YP_003123245.1 KEGG: sfu:Sfum_2019 hypothetical protein YP_003123247.1 KEGG: sus:Acid_4157 hypothetical protein YP_003123249.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003123250.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aav:Aave_0105 radical SAM domain protein YP_003123251.1 PFAM: hypothetical protein; Diverse 7TM receptor extracellular region 2; KEGG: mms:mma_1623 diguanylate cyclase YP_003123252.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123253.1 PFAM: RagB/SusD domain protein YP_003123254.1 PFAM: glycoside hydrolase family 30; KEGG: rfr:Rfer_1106 glycoside hydrolase family protein YP_003123256.1 TIGRFAM: sugar transporter; PFAM: ABC transporter substrate-binding protein; major facilitator superfamily MFS_1; KEGG: kpn:KPN_02872 general substrate transporter YP_003123257.1 PFAM: aldose 1-epimerase; KEGG: csa:Csal_0799 aldose 1-epimerase YP_003123258.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: spe:Spro_4231 hypothetical protein YP_003123259.1 KEGG: hypothetical protein YP_003123260.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: maq:Maqu_2134 AraC protein, arabinose- binding/dimerisation YP_003123261.1 PFAM: haloacid dehalogenase; KEGG: hypothetical protein YP_003123263.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; KEGG: scl:sce0169 peptidase YP_003123264.1 PFAM: FecR protein; KEGG: psp:PSPPH_2117 FecR protein superfamily protein YP_003123265.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_0272 TonB-dependent receptor YP_003123266.1 KEGG: scl:sce5067 hypothetical protein YP_003123268.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: csa:Csal_1098 sigma-24 (FecI-like) YP_003123269.1 PFAM: NGN domain protein; SMART: NGN domain protein; KEGG: aba:Acid345_3498 transcription antitermination protein NusG YP_003123271.1 KEGG: nmu:Nmul_A2087 hypothetical protein YP_003123272.1 KEGG: eta:ETA_05100 hypothetical protein YP_003123273.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003123274.1 KEGG: mxa:MXAN_0168 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein YP_003123275.1 PFAM: Osmosensitive K channel His kinase sensor; KEGG: mxa:MXAN_0167 osmosensitive K+ channel His kinase sensor domain/universal stress domain protein YP_003123276.1 KEGG: pfl:PFL_5195 acetyltransferase YP_003123277.1 KEGG: mlo:mll3129 potassium-transporting atpase C chain, KdpC; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit YP_003123278.1 TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; KEGG: potassium-transporting atpase b chain (potassium- translocating atpase b chain) YP_003123279.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_003123281.1 PFAM: protein of unknown function DUF1223; KEGG: aba:Acid345_3896 protein of unknown function DUF1223 YP_003123282.1 PFAM: OsmC family protein; KEGG: pfo:Pfl01_2206 OsmC-like protein YP_003123283.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: glo:Glov_1166 two component, sigma54 specific, transcriptional regulator, Fis family YP_003123285.1 TIGRFAM: conserved repeat domain protein; outer membrane adhesin like protein; SMART: cadherin; KEGG: vsp:VS_II0856 hypothetical protein YP_003123286.1 TIGRFAM: outer membrane adhesin like protein; conserved repeat domain protein; SMART: cadherin; KEGG: vsp:VS_II0856 hypothetical protein YP_003123288.1 PFAM: hypothetical protein; KEGG: sml:Smlt2618 beta propeller repeat protein YP_003123289.1 PFAM: acyltransferase 3; KEGG: cps:CPS_1821 acyltransferase family protein YP_003123290.1 PFAM: histidine kinase internal region; KEGG: azc:AZC_1300 two-component sensor histidine kinase YP_003123291.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein YP_003123292.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bha:BH1491 protease YP_003123293.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: abc:ACICU_03606 G3E family GTPase YP_003123294.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: ret:RHE_PF00422 RNA polymerase sigma factor YP_003123295.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR YP_003123296.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123297.1 PFAM: RagB/SusD domain protein YP_003123298.1 PFAM: peptidase S15; KEGG: sml:Smlt2275 esterase/peptidase YP_003123300.1 PFAM: scramblase; KEGG: dal:Dalk_1120 scramblase family protein YP_003123302.1 PFAM: CheB methylesterase; KEGG: scl:sce4190 hypothetical protein YP_003123303.1 KEGG: eba:ebA2146 regulator protein; TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; PAC repeat- containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein YP_003123306.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123307.1 PFAM: RagB/SusD domain protein YP_003123308.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: reh:H16_B2518 NADH-dependent flavin oxidoreductase YqiG YP_003123309.1 PFAM: cyclic nucleotide-binding; KEGG: sde:Sde_3995 cyclic nucleotide-binding protein YP_003123310.1 KEGG: noc:Noc_2145 L-sorbosone dehydrogenase YP_003123311.1 PFAM: cytochrome C class I; KEGG: rso:RS03038 major anaerobically induced outer membrane transmembrane protein YP_003123312.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU02160 hypothetical protein YP_003123314.1 PFAM: glycoside hydrolase family 76; SMART: beta and gamma crystallin; KEGG: cja:CJA_0276 carbohydrate binding protein, , cbp6B YP_003123315.1 KEGG: mxa:MXAN_0010 CapA family protein YP_003123316.1 PFAM: NLP/P60 protein; KEGG: sun:SUN_0450 hypothetical protein YP_003123317.1 PFAM: carboxyl transferase; KEGG: aba:Acid345_1428 propionyl-CoA carboxylase YP_003123318.1 PFAM: ribonuclease H; KEGG: dvu:DVU0689 ribonuclease HI YP_003123319.1 PFAM: YceI family protein; KEGG: YceI family protein YP_003123320.1 PFAM: Luciferase-like monooxygenase; KEGG: sus:Acid_4376 luciferase family protein YP_003123321.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003123322.1 PFAM: lipid-binding START domain protein; SMART: lipid-binding START domain protein; KEGG: xac:XAC0537 hypothetical protein YP_003123326.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: SsrA-binding protein; K03664 SsrA-binding protein YP_003123327.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: pca:Pcar_0737 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_003123328.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate YP_003123329.1 PFAM: periplasmic binding protein; KEGG: tmz:Tmz1t_0726 periplasmic binding protein YP_003123330.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: ade:Adeh_3706 cystathionine beta-synthase YP_003123331.1 TIGRFAM: dethiobiotin synthase; KEGG: rpe:RPE_3401 dithiobiotin synthetase YP_003123332.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: nha:Nham_3528 5-formyltetrahydrofolate cyclo- ligase YP_003123333.1 KEGG: hypothetical protein; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_003123334.1 KEGG: bcy:Bcer98_3673 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; SMART: RNA binding S1 domain protein; Cold shock protein YP_003123335.1 PFAM: polyprenyl synthetase; KEGG: sfu:Sfum_1417 polyprenyl synthetase YP_003123336.1 KEGG: gur:Gura_1699 hypothetical protein YP_003123337.1 PFAM: amino acid permease-associated region; KEGG: bph:Bphy_0096 amino acid permease-associated region YP_003123338.1 PFAM: DoxX family protein; KEGG: hypothetical protein YP_003123339.1 KEGG: dds:Ddes_1087 Smr protein/MutS2 YP_003123340.1 KEGG: swd:Swoo_4796 hypothetical protein YP_003123341.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein YP_003123344.1 PFAM: aldehyde dehydrogenase; KEGG: dps:DP2332 piperideine-6-carboxylate dehydrogenase YP_003123345.1 KEGG: Os10g0463800; hypothetical protein YP_003123346.1 KEGG: sat:SYN_02773 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003123347.1 PFAM: Ppx/GppA phosphatase; KEGG: mgm:Mmc1_0350 Ppx/GppA phosphatase YP_003123348.1 PFAM: polyphosphate kinase; KEGG: vpa:VP0573 polyphosphate kinase YP_003123349.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003123350.1 KEGG: afw:Anae109_1984 hypothetical protein YP_003123351.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_003123352.1 KEGG: vfm:VFMJ11_2284 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003123353.1 PFAM: starch synthase catalytic domain protein; KEGG: ppr:PBPRB0406 glycogen synthase YP_003123354.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_003123357.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: pzu:PHZ_c2153 choline dehydrogenase YP_003123358.1 KEGG: cak:Caul_4605 hypothetical protein YP_003123359.1 KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase YP_003123360.1 PFAM: acyltransferase 3; KEGG: aba:Acid345_0070 acyltransferase 3 YP_003123361.1 KEGG: bbt:BBta_7186 hypothetical protein YP_003123362.1 PFAM: outer membrane efflux protein YP_003123363.1 KEGG: dol:Dole_1436 O-antigen polymerase YP_003123365.1 PFAM: acyltransferase 3; KEGG: vvu:VV2_1626 hypothetical protein YP_003123366.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: pat:Patl_1073 protein-tyrosine kinase YP_003123367.1 PFAM: PA14 domain protein; fibronectin type III domain protein; Ig family protein; SMART: PA14 domain protein; fibronectin type III domain protein; LamG domain protein jellyroll fold domain protein; KEGG: sbm:Shew185_0166 outer membrane adhesin like protein YP_003123368.1 PFAM: glycosyl transferase family 2; KEGG: cps:CPS_5020 glycosyl transferase, group 2 family protein YP_003123369.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cheY1; chemotaxis two-component response regulator protein; K03413 two-component system, chemotaxis family, response regulator CheY YP_003123370.1 PFAM: sugar transferase; KEGG: swd:Swoo_1694 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_003123371.1 PFAM: glycosyl transferase family 2; KEGG: bcy:Bcer98_1099 glycosyl transferase family protein YP_003123372.1 PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2884 glycosyl transferase family protein YP_003123373.1 KEGG: abu:Abu_0678 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003123374.1 PFAM: glycosyl transferase group 1; KEGG: dar:Daro_1276 glycosyl transferase, group 1 YP_003123375.1 PFAM: methyltransferase type 11; KEGG: gbm:Gbem_1618 methyltransferase type 11 YP_003123376.1 PFAM: polysaccharide biosynthesis protein; KEGG: ppr:PBPRA2684 hypothetical protein YP_003123377.1 PFAM: PKD domain containing protein; phospholipase/carboxylesterase; two component regulator three Y domain protein; SMART: PKD domain containing protein; Parallel beta- helix repeat; KEGG: gur:Gura_2254 PKD domain-containing protein YP_003123378.1 KEGG: attR; transacetylase YP_003123379.1 PFAM: glycosyl transferase group 1; KEGG: pfl:PFL_2028 glycosyl transferase, group 2 family protein YP_003123380.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N- acetyltransferase; KEGG: fph:Fphi_0696 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003123381.1 PFAM: protein of unknown function DUF77; KEGG: bar:GBAA0380 hypothetical protein YP_003123382.1 KEGG: bbt:BBta_6676 glycosyl transferase YP_003123383.1 PFAM: conserved hypothetical protein; KEGG: afw:Anae109_3197 hypothetical protein YP_003123384.1 PFAM: nucleoside recognition domain protein; KEGG: lch:Lcho_3694 nucleoside recognition domain- containing protein YP_003123385.1 TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related; KEGG: GTP-binding protein YchF; K06942 YP_003123386.1 PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO6511 phosphotransferase family protein YP_003123388.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: amc:MADE_03676 TonB-dependent receptor YP_003123389.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: nmu:Nmul_A1639 heavy metal efflux pump CzcA YP_003123390.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_3837 secretion protein HlyD YP_003123391.1 PFAM: outer membrane efflux protein; KEGG: mca:MCA2110 outer membrane efflux protein YP_003123393.1 KEGG: ade:Adeh_1400 homoserine dehydrogenase / homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase YP_003123394.1 PFAM: OsmC family protein; KEGG: abo:ABO_2022 hypothetical protein YP_003123395.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mfa:Mfla_1691 O-succinylhomoserine sulfhydrylase YP_003123397.1 KEGG: hypothetical protein YP_003123399.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: spe:Spro_1886 hypothetical protein YP_003123400.1 KEGG: noc:Noc_1536 secretion protein HlyD YP_003123401.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sus:Acid_5478 integral membrane sensor signal transduction histidine kinase YP_003123402.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: two component heavy metal response transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR YP_003123403.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_2008 ABC transporter, ATPase subunit YP_003123405.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_003123406.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: sus:Acid_1422 translation initiation factor 3 YP_003123407.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pat:Patl_0424 response regulator receiver protein YP_003123408.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: pol:Bpro_3898 multi-sensor signal transduction histidine kinase YP_003123412.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123413.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bba:Bd0368 cation efflux system protein YP_003123414.1 PFAM: beta-lactamase; KEGG: bsu:BSU34440 penicillin-binding protein 4* YP_003123415.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: sde:Sde_3388 D-3-phosphoglycerate dehydrogenase YP_003123416.1 PFAM: carbohydrate-binding protein; SMART: cellulose binding type IV; KEGG: aba:Acid345_2907 40-residue YVTN beta- propeller repeat protein YP_003123417.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: sal:Sala_2939 50S ribosomal protein L20 YP_003123418.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: dps:DP1426 50S ribosomal protein L35 YP_003123419.1 KEGG: rso:RS05070 hemagglutinin/hemolysin- related protein YP_003123420.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_003123421.1 PFAM: protein of unknown function DUF151; KEGG: sus:Acid_6705 hypothetical protein YP_003123422.1 PFAM: electron transfer flavoprotein subunit alpha; electron transfer flavoprotein alpha/beta-subunit; KEGG: bba:Bd0021 electron transfer flavoprotein subunit alpha YP_003123423.1 PFAM: electron transfer flavoprotein alpha/beta- subunit; KEGG: bat:BAS4419 electron transfer flavoprotein, beta subunit YP_003123424.1 KEGG: sus:Acid_0135 hypothetical protein YP_003123425.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: dol:Dole_0068 tRNA(Ile)-lysidine synthetase YP_003123426.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pat:Patl_0424 response regulator receiver protein YP_003123427.1 KEGG: sfu:Sfum_2837 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003123428.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: bpy:Bphyt_5776 anti-sigma regulatory factor, serine/threonine protein kinase YP_003123429.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mrd:Mrad2831_5231 anti-sigma regulatory factor, serine/threonine protein kinase YP_003123430.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2415 anti-sigma-factor antagonist YP_003123431.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sus:Acid_0527 anti-sigma-factor antagonist YP_003123432.1 PFAM: rhomboid family protein; KEGG: xac:XAC1451 hypothetical protein YP_003123433.1 PFAM: protein of unknown function DUF163; KEGG: bha:BH4007 SPOUT methyltransferase superfamily protein YP_003123434.1 KEGG: jan:Jann_0393 NAD-dependent epimerase/dehydratase YP_003123435.1 PFAM: inositol monophosphatase; KEGG: similar to GA14281-PA YP_003123436.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: azo:azo2447 PobR regulator YP_003123437.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: esa:ESA_02984 hypothetical protein YP_003123438.1 KEGG: scl:sce0333 hypothetical protein YP_003123439.1 KEGG: bha:BH3318 hypothetical protein YP_003123440.1 PFAM: cytochrome C oxidase subunit I; KEGG: rfr:Rfer_4127 cytochrome C oxidase, subunit I YP_003123441.1 PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome C class I; KEGG: pol:Bpro_1266 cytochrome C oxidase, mono-heme subunit/FixO YP_003123443.1 KEGG: mxa:MXAN_7466 hypothetical protein YP_003123444.1 TIGRFAM: cytochrome C biogenesis protein CcsB; PFAM: cytochrome C assembly protein; KEGG: nis:NIS_1187 CcmF/CcyK/CcsA family cytochrome C biogenesis protein YP_003123445.1 KEGG: pst:PSPTO_3078 hypothetical protein YP_003123446.1 PFAM: regulatory protein TetR; KEGG: tcx:Tcr_1301 TetR family transcriptional regulator YP_003123447.1 PFAM: protein of unknown function DUF303 acetylesterase KEGG: sus:Acid_5941 protein of unknown function DUF303, acetylesterase YP_003123448.1 PFAM: aldo/keto reductase; KEGG: gur:Gura_4373 2,5-didehydrogluconate reductase YP_003123449.1 PFAM: aldo/keto reductase; KEGG: sus:Acid_2909 aldo/keto reductase YP_003123450.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003123452.1 PFAM: histidine kinase internal region; KEGG: aba:Acid345_3488 periplasmic sensor signal transduction histidine kinase YP_003123453.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein YP_003123454.1 PFAM: cupin; KEGG: sus:Acid_5678 cupin 2 domain-containing protein YP_003123455.1 PFAM: carbohydrate-binding protein; SMART: carbohydrate-binding protein; KEGG: hch:HCH_05453 chitinase YP_003123456.1 KEGG: gbm:Gbem_0165 hypothetical protein YP_003123457.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003123458.1 KEGG: bcj:BCAM2090 hypothetical protein YP_003123459.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate YP_003123460.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll2336 transcriptional regulatory protein YP_003123461.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1910 short chain dehydrogenase YP_003123464.1 PFAM: sulfatase; KEGG: ent:Ent638_1506 sulfatase YP_003123466.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: ade:Adeh_3206 short-chain dehydrogenase/reductase SDR YP_003123467.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003123468.1 PFAM: glycoside hydrolase family 18; carbohydrate-binding protein; coagulation factor 5/8 type domain protein; SMART: cellulose binding type IV; coagulation factor 5/8 type domain protein; chitinase II; KEGG: sde:Sde_0475 beta-glucosidase-related glycosidases-like YP_003123469.1 PFAM: FecR protein; KEGG: pfl:PFL_4040 sigma factor regulatory protein FecR/PupR family YP_003123470.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: ret:RHE_PC00138 RNA polymerase sigma-E factor YP_003123471.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123472.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003123474.1 KEGG: bcy:Bcer98_0322 hypothetical protein YP_003123475.1 KEGG: sse:Ssed_3274 lipoprotein YP_003123476.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1115 proton-translocating NADH- quinone oxidoreductase, chain N YP_003123477.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: acr:Acry_1109 proton-translocating NADH- quinone oxidoreductase, chain M YP_003123478.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: nmu:Nmul_A1023 proton-translocating NADH- quinone oxidoreductase, chain L YP_003123479.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mca:MCA1350 NADH dehydrogenase I, K subunit YP_003123480.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: noc:Noc_1119 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_003123481.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nmu:Nmul_A1020 NADH dehydrogenase subunit I YP_003123482.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: noc:Noc_1121 NADH dehydrogenase subunit H YP_003123483.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase Fe4S4 region; ferredoxin; KEGG: noc:Noc_1122 NADH dehydrogenase subunit G YP_003123484.1 KEGG: noc:Noc_1123 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_003123485.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: noc:Noc_1124 NADH dehydrogenase (ubiquinone), 24 kDa subunit YP_003123486.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms YP_003123487.1 KEGG: noc:Noc_1126 NADH dehydrogenase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003123488.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: nmu:Nmul_A1013 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_003123489.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: pna:Pnap_1409 signal-transduction protein with CBS domains YP_003123490.1 PFAM: integrase family protein; KEGG: bcz:BCZK4231 integrase/recombinase YP_003123492.1 KEGG: kpn:KPN_01400 hypothetical protein YP_003123494.1 KEGG: bbr:BB2188 hypothetical protein YP_003123497.1 KEGG: hac:Hac_0361 hypothetical protein YP_003123505.1 KEGG: nha:Nham_0305 hypothetical protein YP_003123511.1 KEGG: bbr:BB1685 hypothetical protein YP_003123512.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bsu:BSU12510 transcriptional regulator YP_003123514.1 KEGG: dac:Daci_3219 hypothetical protein YP_003123515.1 KEGG: hsm:HSM_0883 hypothetical protein YP_003123520.1 KEGG: reu:Reut_A2370 hypothetical protein YP_003123521.1 KEGG: bbr:BB3535 hypothetical protein YP_003123522.1 PFAM: ERF family protein; KEGG: sgl:SG0930 hypothetical protein YP_003123523.1 PFAM: pentapeptide repeat containing protein; KEGG: hit:NTHI1489 hypothetical protein YP_003123538.1 KEGG: ecy:ECSE_P4-0002 hypothetical protein YP_003123542.1 KEGG: cjr:CJE0577 terminase B protein YP_003123543.1 PFAM: portal protein; KEGG: ech:ECH_0033 HK97 family phage portal protein YP_003123544.1 KEGG: esa:ESA_03038 hypothetical protein YP_003123546.1 KEGG: sed:SeD_A0642 hypothetical protein YP_003123551.1 KEGG: hch:HCH_06039 hypothetical protein YP_003123553.1 KEGG: mno:Mnod_3544 head morphogenesis protein SPP1 gp7 YP_003123554.1 PFAM: peptidase U35 phage prohead HK97; KEGG: pla:Plav_0905 HK97 family phage prohead protease YP_003123555.1 KEGG: nar:Saro_0649 phage major capsid protein, HK97 YP_003123557.1 KEGG: wol:WD0076 uncharacterized phage protein YP_003123558.1 TIGRFAM: phage head-tail adaptor; PFAM: head-tail adaptor protein; KEGG: hch:HCH_04551 bacteriophage head-tail adaptor YP_003123559.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: hypothetical protein YP_003123563.1 KEGG: bpm:BURPS1710b_A0463 membrane- anchored cell surface protein YP_003123566.1 KEGG: xau:Xaut_4480 tail collar domain-containing protein YP_003123568.1 SMART: hypothetical protein; KEGG: bpm:BURPS1710b_A0463 membrane- anchored cell surface protein YP_003123569.1 KEGG: bba:Bd2088 hypothetical protein YP_003123574.1 KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase YP_003123577.1 KEGG: bac:BamMC406_5361 filamentous haemagglutinin outer membrane protein YP_003123579.1 KEGG: mca:MCA1928 hypothetical protein YP_003123581.1 KEGG: cja:CJA_3688 hypothetical protein YP_003123582.1 SMART: chitinase II; KEGG: bsu:BSU00160 hypothetical protein YP_003123583.1 KEGG: sdn:Sden_3009 hypothetical protein YP_003123584.1 KEGG: rde:RD1_4216 hypothetical protein YP_003123585.1 KEGG: ppd:Ppro_0373 hypothetical protein YP_003123586.1 TIGRFAM: conserved hypothetical protein; KEGG: ppd:Ppro_0372 phage tail protein YP_003123587.1 TIGRFAM: conserved hypothetical protein; KEGG: gbm:Gbem_2547 conserved hypothetical phage tail protein YP_003123589.1 KEGG: gbm:Gbem_2549 hypothetical protein YP_003123590.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: cja:CJA_3675 rhs element Vgr protein YP_003123591.1 PFAM: PAAR repeat-containing protein; KEGG: dsh:Dshi_2461 PaaR repeat-containing protein YP_003123592.1 PFAM: GPW/gp25 family protein; KEGG: rde:RD1_4224 hypothetical protein YP_003123593.1 KEGG: cja:CJA_3678 hypothetical protein YP_003123594.1 KEGG: ppd:Ppro_0365 hypothetical protein YP_003123595.1 KEGG: ppd:Ppro_0364 hypothetical protein YP_003123596.1 KEGG: sdn:Sden_2997 hypothetical protein YP_003123597.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: AAA ATPase central domain protein YP_003123598.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sat:SYN_00032 cell wall degradation protein YP_003123599.1 KEGG: sus:Acid_4900 hypothetical protein YP_003123600.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: sat:SYN_02393 peptidylarginine deiminase related enzyme YP_003123601.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sat:SYN_02392 N-carbamoylputrescine amidase YP_003123602.1 KEGG: scl:sce4505 hypothetical protein YP_003123604.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vha:VIBHAR_00261 phosphatidylglycerophosphatase YP_003123605.1 KEGG: gur:Gura_3003 YVTN beta-propeller repeat- containing protein YP_003123607.1 PFAM: glycoside hydrolase, family 20, catalytic core; KEGG: gur:Gura_3052 glycoside hydrolase family protein YP_003123608.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ftm:FTM_0546 cold shock protein, DNA-binding YP_003123609.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psa:PST_2757 probable FMN oxidoreductase YP_003123610.1 PFAM: protein of unknown function DUF583; KEGG: dvm:DvMF_2825 protein of unknown function DUF583 YP_003123611.1 KEGG: dal:Dalk_4977 hypothetical protein YP_003123612.1 PFAM: terpene synthase metal-binding domain protein; KEGG: scl:sce8552 terpene cyclase YP_003123613.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: bba:Bd3430 sensory transduction histidine kinase YP_003123614.1 KEGG: xop:PXO_02197 peptidase YP_003123616.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003123617.1 KEGG: hypothetical protein YP_003123618.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02028 short-chain alcohol dehydrogenase-like protein YP_003123619.1 PFAM: sodium:dicarboxylate symporter; KEGG: sat:SYN_01421 proton/sodium-glutamate symport protein YP_003123620.1 PFAM: protein of unknown function DUF1304; KEGG: jan:Jann_1910 hypothetical protein YP_003123621.1 PFAM: OmpA/MotB domain protein; KEGG: pag:PLES_42821 outer membrane protein precursor YP_003123622.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123623.1 KEGG: hypothetical protein YP_003123624.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aci:ACIAD3176 sensory transduction histidine kinase YP_003123627.1 TIGRFAM: methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: psb:Psyr_4307 hypothetical protein YP_003123628.1 KEGG: cja:CJA_0606 hypothetical protein YP_003123629.1 KEGG: psa:PST_3106 NAD-dependent aldehyde dehydrogenase YP_003123630.1 KEGG: kpe:KPK_3085 sensory box histidine kinase/response regulator YP_003123631.1 PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: gbm:Gbem_2805 two component, sigma54 specific, transcriptional regulator, fis family YP_003123632.1 PFAM: glycosyl transferase group 1; KEGG: bcy:Bcer98_1259 glycosyl transferase group 1 YP_003123633.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gsu:GSU1891 response regulator YP_003123634.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: glo:Glov_2618 DEAD/DEAH box helicase domain protein YP_003123635.1 PFAM: mechanosensitive ion channel MscS; KEGG: xca:xccb100_3431 small-conductance mechanosensitive channel YP_003123636.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_PC0000785 glyoxalase protein YP_003123638.1 PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_4592 OmpA/MotB domain protein YP_003123639.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: aba:Acid345_0514 alpha-1,2-mannosidase YP_003123640.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR YP_003123641.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: ccv:CCV52592_0578 Na+/H+ antiporter YP_003123642.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; response regulator receiver; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rpi:Rpic_2943 two component transcriptional regulator, LuxR family YP_003123643.1 PFAM: lipolytic protein G-D-S-L family; KEGG: aby:ABAYE1272 hypothetical protein YP_003123644.1 PFAM: acriflavin resistance protein; KEGG: pla:Plav_1535 acriflavin resistance protein YP_003123645.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: hch:HCH_06589 membrane-fusion protein YP_003123646.1 PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_3710 outer membrane efflux protein YP_003123647.1 PFAM: regulatory protein TetR; KEGG: aba:Acid345_4024 transcriptional regulator, TetR family YP_003123648.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: she:Shewmr4_3104 NAD-dependent epimerase/dehydratase YP_003123649.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: hps:HPSH_00530 cystathionine gamma- synthase/cystathionine beta-lyase YP_003123650.1 PFAM: amidohydrolase; amidohydrolase; KEGG: mxa:MXAN_2373 M38 (beta-aspartyl dipeptidase) family protein YP_003123651.1 PFAM: protein of unknown function DUF218; KEGG: smt:Smal_1483 protein of unknown function DUF218 YP_003123652.1 PFAM: sodium:dicarboxylate symporter; KEGG: sat:SYN_01421 proton/sodium-glutamate symport protein YP_003123653.1 KEGG: glo:Glov_2584 hypothetical protein YP_003123655.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mxa:MXAN_2697 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_003123656.1 PFAM: NUDIX hydrolase; KEGG: scl:sce2352 hypothetical protein YP_003123657.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate YP_003123658.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source YP_003123659.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism YP_003123660.1 PFAM: protein of unknown function DUF1234; KEGG: ajs:Ajs_0030 hypothetical protein YP_003123661.1 PFAM: domain of unknown function DUF1730; KEGG: maq:Maqu_2775 iron-sulfur cluster binding protein YP_003123662.1 KEGG: aba:Acid345_0540 hypothetical protein YP_003123663.1 PFAM: transglutaminase domain protein; KEGG: aba:Acid345_0539 hypothetical protein YP_003123664.1 KEGG: dol:Dole_2696 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase YP_003123665.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein YP_003123666.1 PFAM: small multidrug resistance protein; KEGG: ccr:CC_3443 SugE protein YP_003123667.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bba:Bd0085 cytidine/deoxycytidylate deaminase family protein YP_003123669.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: glo:Glov_2954 multi-sensor hybrid histidine kinase YP_003123670.1 KEGG: spe:Spro_3717 acid shock protein precursor YP_003123672.1 PFAM: peptidase M28; protease-associated PA domain protein; transferrin receptor domain protein dimerisation region; KEGG: sus:Acid_4582 glutamate carboxypeptidase II YP_003123673.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein YP_003123675.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_6176 outer membrane efflux protein YP_003123676.1 PFAM: acriflavin resistance protein; KEGG: mxa:MXAN_6177 efflux transporter, AcrB/AcrD/AcrF family, inner membrane component YP_003123677.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sus:Acid_5519 RND family efflux transporter MFP subunit YP_003123679.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: lip:LI0288 PAP2 superfamily protein YP_003123680.1 PFAM: chloride channel core; KEGG: ppd:Ppro_0837 Cl-channel, voltage-gated family protein YP_003123681.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: spe:Spro_2613 alcohol dehydrogenase YP_003123683.1 PFAM: aldo/keto reductase; KEGG: eca:ECA3182 oxidoreductase YP_003123684.1 KEGG: mxa:MXAN_1192 alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase family 20; trehalose- phosphatase YP_003123685.1 PFAM: glycoside hydrolase 15-related; KEGG: sus:Acid_1157 glycoside hydrolase 15-related protein YP_003123688.1 PFAM: ribonuclease BN; KEGG: reu:Reut_B5335 ribonuclease BN YP_003123690.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ilo:IL2328 dipeptidyl aminopeptidase YP_003123692.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: sus:Acid_0168 hypothetical protein YP_003123693.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: oat; ornithine aminotransferase; K00819 ornithine--oxo-acid transaminase YP_003123694.1 PFAM: acyl-coA-binding protein ACBP; KEGG: cvi:CV_3117 acyl-CoA-binding protein YP_003123695.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_003123696.1 KEGG: bba:Bd1307 hypothetical protein YP_003123697.1 KEGG: apa:APP7_1446 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_003123698.1 PFAM: protein of unknown function UPF0102; KEGG: gme:Gmet_2864 hypothetical protein YP_003123699.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_003123700.1 PFAM: protein of unknown function DUF178; KEGG: aba:Acid345_3342 protein of unknown function DUF178 YP_003123701.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: aba:Acid345_0125 NADP oxidoreductase, coenzyme F420-dependent YP_003123702.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: ccs:CCNA_02281 membrane alanine aminopeptidase YP_003123703.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_B1961 ABC peptide transporter, periplasmic ligand binding protein YP_003123704.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003123705.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2444 short-chain dehydrogenase/reductase SDR YP_003123706.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_003123707.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: scl:sce3211 hypothetical protein YP_003123708.1 PFAM: oxidoreductase molybdopterin binding; KEGG: sus:Acid_7253 hypothetical protein YP_003123709.1 PFAM: fatty acid desaturase; KEGG: scl:sce6078 Fatty acid desaturase YP_003123710.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); KEGG: sun:SUN_1518 HAD family hydrolase YP_003123711.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sun:SUN_1519 short chain dehydrogenase YP_003123712.1 PFAM: FAD linked oxidase domain protein; KEGG: sun:SUN_1520 oxidoreductase YP_003123713.1 PFAM: UbiA prenyltransferase; KEGG: sun:SUN_1522 UbiA prenyltransferase family protein YP_003123714.1 KEGG: pne:Pnec_0344 hypothetical protein YP_003123715.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mxa:MXAN_6727 hypothetical protein YP_003123716.1 KEGG: rde:RD1_3767 hypothetical protein YP_003123717.1 PFAM: Radical SAM domain protein; KEGG: aci:ACIAD1170 hypothetical protein YP_003123718.1 KEGG: abm:ABSDF0378 hypothetical protein YP_003123721.1 PFAM: endonuclease V; KEGG: sde:Sde_3125 endonuclease V YP_003123722.1 KEGG: msl:Msil_0816 hypothetical protein YP_003123723.1 PFAM: sodium/hydrogen exchanger; KEGG: cco:CCC13826_1715 Na+/H+ antiporter YP_003123724.1 PFAM: protein of unknown function DUF763; KEGG: sus:Acid_7730 hypothetical protein YP_003123725.1 PFAM: MgtC/SapB transporter; KEGG: mxa:MXAN_6522 MgtC family protein YP_003123728.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: mxa:MXAN_1097 efflux ABC transporter, permease/ATP-binding protein YP_003123729.1 PFAM: thioesterase superfamily protein; KEGG: ppr:PBPRB1873 acyl-CoA thioester hydrolase YP_003123730.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c3264 TonB-dependent receptor YP_003123731.1 PFAM: protein of unknown function DUF1260; Protein of unknown function DUF695; KEGG: abc:ACICU_02508 cytoplasmic protein YP_003123732.1 KEGG: cja:CJA_2625 hypothetical protein YP_003123733.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mxa:MXAN_4341 oxidoreductase alpha (molybdopterin) subunit YP_003123734.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: pub:SAR11_0681 formate dehydrogenase chain D YP_003123735.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: sfu:Sfum_2040 protein of unknown function, zinc metallopeptidase YP_003123736.1 KEGG: sde:Sde_3467 regulatory protein, LuxR YP_003123737.1 PFAM: ATP-binding region ATPase domain protein; hypothetical protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; KEGG: pha:PSHAa0111 hypothetical protein YP_003123738.1 TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related; KEGG: noc:Noc_1092 SelT/SelW/SelH selenoprotein YP_003123739.1 KEGG: mxa:MXAN_2867 hypothetical protein YP_003123741.1 PFAM: NADPH-dependent FMN reductase; KEGG: sus:Acid_3790 NADPH-dependent FMN reductase YP_003123742.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bce:BC2532 methyltransferase YP_003123743.1 KEGG: eum:ECUMN_3642 cytoplasmic protein YP_003123745.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein YP_003123746.1 PFAM: histidine kinase internal region; KEGG: sde:Sde_3001 DEAD/DEAH box helicase-like YP_003123747.1 PFAM: TonB-dependent receptor plug; KEGG: ccs:CCNA_00858 TonB-dependent receptor YP_003123749.1 KEGG: hypothetical protein YP_003123750.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: son:SO_4388 DNA-binding response regulator YP_003123751.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: scl:sce2435 sensor kinase YP_003123752.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_3353 hypothetical protein YP_003123753.1 PFAM: polysaccharide deacetylase; KEGG: bam:Bamb_1353 polysaccharide deacetylase YP_003123754.1 PFAM: DoxX family protein; KEGG: bcy:Bcer98_3079 DoxX family protein YP_003123755.1 KEGG: hch:HCH_03961 DNA binding domain-containing protein YP_003123756.1 PFAM: zinc finger SWIM domain protein; KEGG: hch:HCH_03960 SWIM zinc finger domain- containing protein YP_003123757.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: hch:HCH_03958 retron-type reverse transcriptase YP_003123759.1 PFAM: cytochrome P450; KEGG: bsu:BSU12210 hypothetical protein YP_003123760.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: pat:Patl_2544 periplasmic sensor hybrid histidine kinase YP_003123761.1 PFAM: terpene synthase metal-binding domain protein; KEGG: scl:sce8552 terpene cyclase YP_003123762.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: scl:sce8812 short-chain dehydrogenase YP_003123763.1 PFAM: helix-turn-helix HxlR type; KEGG: amc:MADE_01970 transcriptional regulator YP_003123764.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: hemolysin protein YP_003123765.1 KEGG: gbm:Gbem_3438 hypothetical protein YP_003123766.1 KEGG: hypothetical protein YP_003123768.1 PFAM: peptidase M23; KEGG: hypothetical protein YP_003123769.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003123770.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vha:VIBHAR_05256 short-chain dehydrogenase/reductase SDR YP_003123771.1 PFAM: xylose isomerase; KEGG: pat:Patl_2692 twin-arginine translocation pathway signal YP_003123773.1 KEGG: dvl:Dvul_1585 membrane protein involved in aromatic hydrocarbon degradation YP_003123774.1 KEGG: rso:RS05070 hemagglutinin/hemolysin- related protein YP_003123775.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rso:RSc0292 response regulator transcription regulator protein YP_003123776.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003123777.1 PFAM: protein of unknown function UPF0118; KEGG: gme:Gmet_2050 hypothetical protein YP_003123779.1 PFAM: adenylylsulfate kinase; KEGG: sus:Acid_7933 adenylylsulfate kinase / phosphoadenylylsulfate reductase (thioredoxin) YP_003123780.1 KEGG: bvi:Bcep1808_3211 lipopolysaccharide biosynthesis protein-like protein YP_003123781.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003123783.1 PFAM: protein of unknown function DUF1089; KEGG: pap:PSPA7_3300 hypothetical protein YP_003123784.1 KEGG: met:M446_4458 hypothetical protein YP_003123786.1 PFAM: glycoside hydrolase family 16; KEGG: glycoside hydrolase YP_003123787.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; KEGG: rpc:RPC_3780 multi-sensor signal transduction histidine kinase YP_003123788.1 KEGG: pca:Pcar_2497 hypothetical protein YP_003123789.1 KEGG: sde:Sde_1638 hypothetical protein YP_003123792.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003123793.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sfr:Sfri_4008 TonB-dependent receptor, plug YP_003123794.1 PFAM: regulatory protein LysR; KEGG: tdn:Suden_1537 ModE family transcriptional regulator YP_003123795.1 KEGG: GG15474 gene product from transcript GG15474- RA; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003123796.1 KEGG: mxa:MXAN_6110 hypothetical protein YP_003123797.1 PFAM: protein of unknown function DUF182; KEGG: mxa:MXAN_6109 XdhC/CoxI family protein YP_003123798.1 KEGG: pfo:Pfl01_2175 hypothetical protein YP_003123799.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pfo:Pfl01_2174 twin-arginine translocation pathway signal YP_003123800.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bmj:BMULJ_01280 isoquinoline 1- oxidoreductase, alpha subunit YP_003123801.1 KEGG: yen:YE1936 hypothetical protein YP_003123802.1 KEGG: hypothetical protein YP_003123803.1 KEGG: rpe:RPE_4489 hypothetical protein YP_003123804.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003123805.1 KEGG: bcy:Bcer98_2126 protein tyrosine/serine phosphatase YP_003123806.1 TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2520 TonB-dependent receptor YP_003123807.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hne:HNE_0405 AraC family transcriptional regulator YP_003123808.1 KEGG: bcr:BCAH187_A2849 hypothetical protein YP_003123809.1 PFAM: glycoside hydrolase family 5; carbohydrate-binding protein; SMART: cellulose binding type IV; KEGG: cja:CJA_2760 cellulase, , cel5G YP_003123810.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003123811.1 PFAM: protein of unknown function DUF779; KEGG: aeh:Mlg_2727 hypothetical protein YP_003123812.1 PFAM: aldehyde dehydrogenase; KEGG: noc:Noc_2916 aldehyde dehydrogenase YP_003123813.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_01851 AraC-type DNA-binding domain- containing protein YP_003123814.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003123816.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; K03564 peroxiredoxin Q/BCP YP_003123817.1 KEGG: met:M446_4604 hypothetical protein YP_003123818.1 PFAM: ATP-binding region ATPase domain protein; two component regulator three Y domain protein; histidine kinase dimerisation and phosphoacceptor region; two component regulator propeller; KEGG: sus:Acid_4777 histidine kinase YP_003123819.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bcz:BCZK5108 response regulator YP_003123820.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: sus:Acid_6510 cytochrome-c peroxidase YP_003123821.1 PFAM: protein of unknown function DUF839; KEGG: mno:Mnod_0281 protein of unknown function DUF839 YP_003123822.1 KEGG: rme:Rmet_1657 conserved hypothetical protein- transmembrane prediction YP_003123823.1 PFAM: methyltransferase type 12; methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; KEGG: sun:SUN_0643 tellurite resistance protein TehB YP_003123824.1 KEGG: aby:ABAYE0792 hypothetical protein YP_003123825.1 PFAM: DinB family protein YP_003123826.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abc:ACICU_03092 hypothetical protein YP_003123827.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: nar:Saro_3526 type I phosphodiesterase/nucleotide pyrophosphatase YP_003123829.1 KEGG: rpe:RPE_2447 hypothetical protein YP_003123830.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: nha:Nham_2002 DEAD/DEAH box helicase-like YP_003123831.1 KEGG: sus:Acid_4741 hypothetical protein YP_003123832.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: amc:MADE_01501 secreted serine protease, subtilisin family, possibly excreted YP_003123833.1 PFAM: RagB/SusD domain protein YP_003123834.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003123835.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor YP_003123836.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bra:BRADO4891 RNA polymerase sigma factor YP_003123838.1 KEGG: aba:Acid345_0662 hypothetical protein YP_003123839.1 PFAM: 17 kDa surface antigen; KEGG: tbd:Tbd_2341 hypothetical protein YP_003123840.1 PFAM: alpha/beta hydrolase; KEGG: sus:Acid_5877 hypothetical protein YP_003123841.1 PFAM: protein of unknown function DUF296; KEGG: cti:RALTA_A1663 conserved hypothetical protein; exported protein YP_003123843.1 PFAM: acyltransferase 3; KEGG: rpi:Rpic_0631 acyltransferase 3 YP_003123844.1 PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_1491 major facilitator transporter YP_003123846.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: bcr:BCAH187_A2347 alfa-L-rhamnosidase YP_003123847.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003123848.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: dol:Dole_1989 methyltransferase type 11 YP_003123849.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bha:BH1937 hypothetical protein YP_003123850.1 PFAM: cupin; KEGG: pap:PSPA7_3290 cupin 2 domain-containing protein YP_003123851.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: swi:Swit_0985 AsnC family transcriptional regulator YP_003123852.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: aha:AHA_0704 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase YP_003123853.1 PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: mgm:Mmc1_1094 outer membrane adhesin like protein YP_003123854.1 PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: mgm:Mmc1_1094 outer membrane adhesin like protein YP_003123855.1 PFAM: peptidase domain protein; fibronectin type III domain protein; SMART: fibronectin type III domain protein; KEGG: noc:Noc_0728 hypothetical protein YP_003123856.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr2185 hypothetical protein YP_003123857.1 KEGG: rsh:Rsph17029_1710 flagellar hook-associated protein FlgK YP_003123858.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0999 ABC-type multidrug transport system ATPase and permease component-like protein YP_003123861.1 PFAM: LytTr DNA-binding region; KEGG: bar:GBAA1861 methyl-accepting/DNA response regulator YP_003123863.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase YP_003123867.1 KEGG: bcy:Bcer98_0801 integral membrane sensor signal transduction histidine kinase YP_003123868.1 KEGG: nis:NIS_1682 hypothetical protein YP_003123869.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase YP_003123870.1 KEGG: pde:Pden_0447 hypothetical protein YP_003123871.1 KEGG: bpa:BPP0493 hypothetical protein YP_003123873.1 PFAM: transposase IS3/IS911 family protein; KEGG: dps:DP1713 transposase YP_003123874.1 PFAM: integrase catalytic region; KEGG: mgm:Mmc1_2644 integrase, catalytic region YP_003123875.1 KEGG: bvi:Bcep1808_6840 hypothetical protein YP_003123876.1 KEGG: afe:Lferr_0294 ATP-dependent endonuclease, OLD family YP_003123877.1 KEGG: afe:Lferr_0295 hypothetical protein YP_003123878.1 KEGG: bcr:BCAH187_A3022 hypothetical protein YP_003123879.1 KEGG: gdj:Gdia_1062 hypothetical protein YP_003123882.1 KEGG: hypothetical protein YP_003123884.1 KEGG: ecf:ECH74115_0842 protein TolA YP_003123885.1 PFAM: FG-GAP repeat protein; cell surface receptor IPT/TIG domain protein; SMART: cell surface receptor IPT/TIG domain protein; KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein YP_003123886.1 PFAM: amidohydrolase; KEGG: pfl:PFL_4131 twin-arginine translocation pathway signal sequence domain-containing protein YP_003123887.1 KEGG: scl:sce4795 ribosomal protein L11 methyltransferase YP_003123889.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: gsu:GSU3421 Crp/Fnr family transcriptional regulator YP_003123891.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ppd:Ppro_3009 hypothetical protein YP_003123892.1 PFAM: helix-turn-helix HxlR type; KEGG: abu:Abu_0028 hypothetical protein YP_003123893.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1990 oxidoreductase YP_003123894.1 KEGG: rsq:Rsph17025_3826 hypothetical protein YP_003123895.1 KEGG: pat:Patl_2657 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10 YP_003123896.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: cak:Caul_1302 glycoside hydrolase family alpha-L-fucosidase YP_003123897.1 PFAM: esterase; glycoside hydrolase family 13 domain protein; KEGG: sus:Acid_2103 esterase YP_003123898.1 PFAM: helix-turn-helix HxlR type; KEGG: bca:BCE_3438 hypothetical protein YP_003123899.1 PFAM: NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: hypothetical protein YP_003123900.1 PFAM: protein of unknown function DUF323; KEGG: hypothetical protein YP_003123902.1 attaches phosphoethanolamine to lipid A at the 1 position of the disaccharide backbone in contrast to other gram-negative bacteria YP_003123903.1 PFAM: monooxygenase FAD-binding; KEGG: msl:Msil_0387 monooxygenase FAD-binding YP_003123904.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dds:Ddes_0430 transcriptional regulator, AraC family YP_003123906.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ilo:IL2076 catabolite gene activator protein YP_003123907.1 KEGG: rlt:Rleg2_5090 hypothetical protein YP_003123908.1 PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_1438 monooxygenase, FAD-binding YP_003123909.1 KEGG: bja:bll0718 transporter YP_003123910.1 KEGG: mxa:MXAN_3813 hypothetical protein YP_003123911.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oan:Oant_1136 short-chain dehydrogenase/reductase SDR YP_003123912.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A2547 transcriptional regulator, MarR family YP_003123914.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003123915.1 PFAM: amidase; KEGG: mch:Mchl_4838 amidase YP_003123916.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cak:Caul_5112 NADH:flavin oxidoreductase/NADH oxidase YP_003123917.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A5212 hypothetical protein YP_003123918.1 KEGG: abo:ABO_1733 hypothetical protein YP_003123919.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: lpf:lpl1180 hypothetical protein YP_003123921.1 KEGG: ccv:CCV52592_1819 hypothetical protein YP_003123922.1 KEGG: mxa:MXAN_6376 hypothetical protein YP_003123923.1 PFAM: cupin; KEGG: sus:Acid_7737 cupin 2 domain-containing protein YP_003123924.1 KEGG: NSP1; Essential component of the nuclear pore complex, which mediates nuclear import and export YP_003123925.1 PFAM: methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; methyltransferase type 12; KEGG: sus:Acid_4469 methyltransferase type 11 YP_003123926.1 KEGG: amc:MADE_03499 amidohydrolase YP_003123927.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; hypothetical protein; hypothetical protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: bte:BTH_II2334 sensor histidine kinase YP_003123928.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: hch:HCH_00419 response regulator YP_003123929.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mlo:mlr4398 transcription regulator YP_003123930.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_0733 glyoxalase/bleomycin resistance protein/dioxygenase YP_003123933.1 PFAM: helix-turn-helix HxlR type; KEGG: pca:Pcar_1088 MarR family transcriptional regulator YP_003123934.1 PFAM: nitroreductase; KEGG: aav:Aave_4019 nitroreductase YP_003123935.1 KEGG: mxa:MXAN_1627 hypothetical protein YP_003123936.1 PFAM: ion transporter ; Ion transport 2 domain protein; KEGG: dal:Dalk_2437 ion transport protein YP_003123937.1 PFAM: helix-turn-helix HxlR type; KEGG: dvm:DvMF_2974 transcriptional regulator, HxlR family YP_003123938.1 PFAM: alpha/beta hydrolase; KEGG: bra:BRADO1897 hydrolase YP_003123939.1 PFAM: glycoside hydrolase family 5; fibronectin type III domain protein; KEGG: cja:CJA_3369 cellulase, , cel5C YP_003123941.1 PFAM: ATP-binding region ATPase domain protein; two component regulator three Y domain protein; histidine kinase dimerisation and phosphoacceptor region; two component regulator propeller; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein YP_003123942.1 KEGG: dal:Dalk_2500 peptidase C11 clostripain YP_003123944.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bce:BC5411 two-component response regulator YhcZ YP_003123947.1 KEGG: scl:sce7203 metalloprotease MEP1-like protein YP_003123949.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: abc:ACICU_01927 dihydrofolate reductase YP_003123950.1 KEGG: jan:Jann_4029 hypothetical protein YP_003123951.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msl:Msil_0061 short-chain dehydrogenase/reductase SDR YP_003123952.1 PFAM: regulatory protein TetR; KEGG: pfl:PFL_2927 TetR family transcriptional regulator YP_003123953.1 PFAM: peptidase S41; KEGG: eli:ELI_14225 hypothetical protein YP_003123954.1 KEGG: sfu:Sfum_2664 hypothetical protein YP_003123955.1 KEGG: eca:ECA1808 transporter YP_003123956.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: sat:SYN_02956 transcriptional regulator YP_003123957.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2118 signal transduction histidine kinase YP_003123958.1 KEGG: mlo:mlr0992 hypothetical protein YP_003123959.1 PFAM: alpha/beta hydrolase; KEGG: bur:Bcep18194_C6868 alpha/beta hydrolase YP_003123961.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: hne:HNE_3360 NAD-dependent epimerase/dehydratase family protein YP_003123962.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein YP_003123964.1 KEGG: mch:Mchl_2811 hypothetical protein YP_003123965.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spl:Spea_2717 AraC family transcriptional regulator YP_003123966.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: rlt:Rleg2_5171 NAD-dependent epimerase/dehydratase YP_003123967.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1990 oxidoreductase YP_003123968.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003123969.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pde:Pden_3117 short-chain dehydrogenase/reductase SDR YP_003123970.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_1016 short-chain dehydrogenase/reductase SDR YP_003123971.1 KEGG: bid:Bind_0038 signal peptide protein YP_003123973.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003123974.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sfu:Sfum_3484 redoxin domain protein YP_003123975.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: vvu:VV1_0729 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase YP_003123976.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: sus:Acid_6732 NAD-dependent epimerase/dehydratase YP_003123977.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dehydrogenase/reductase protein YP_003123978.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003123979.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll3668 transcriptional regulatory protein YP_003123980.1 PFAM: amidohydrolase 2; KEGG: predicted metal-dependent hydrolase of the TIM-barrel fold YP_003123981.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: mxa:MXAN_5269 S1D (lysyl endopeptidase) subfamily C-terminal domain protein YP_003123982.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bpy:Bphyt_5991 xanthine dehydrogenase YP_003123983.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: pst:PSPTO_4651 oxidoreductase, molybdopterin- binding subunit YP_003123984.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mrd:Mrad2831_5461 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_003123985.1 PFAM: fatty acid desaturase; KEGG: scl:sce6078 Fatty acid desaturase YP_003123986.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ank:AnaeK_2309 response regulator receiver modulated diguanylate cyclase YP_003123987.1 KEGG: amc:MADE_01275 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003123988.1 PFAM: KaiB domain protein; KEGG: KaiB domain protein YP_003123989.1 PFAM: KaiB domain protein; KEGG: KaiB domain protein; K08481 circadian clock protein KaiB YP_003123990.1 acts as a promotor non-specific transcription repressor YP_003123991.1 PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; RNA recognition, region 1; KEGG: lch:Lcho_0186 RNP-1 like RNA-binding protein YP_003123993.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fph:Fphi_0487 glyoxalase family protein YP_003123994.1 PFAM: NmrA family protein; KEGG: bba:Bd3174 nucleoside-diphosphate- sugar epimerase YP_003123995.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rru:Rru_A2338 AraC family transcriptional regulator YP_003123996.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pol:Bpro_5550 NADH:flavin oxidoreductase/NADH oxidase YP_003123997.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: gbm:Gbem_0506 alcohol dehydrogenase GroES domain protein YP_003123998.1 PFAM: hypothetical protein; SMART: hypothetical protein; hypothetical protein; KEGG: ecx:EcHS_A2555 WGR domain-containing protein YP_003124000.1 PFAM: cyclic-AMP phosphodiesterase class-II; KEGG: vfi:VF_1256 3',5'-cyclic-nucleotide phosphodiesterase YP_003124001.1 KEGG: bra:BRADO4970 hypothetical protein YP_003124004.1 PFAM: glycoside hydrolase family 30; KEGG: sde:Sde_2994 glucosylceramidase YP_003124005.1 KEGG: bja:bll1872 hypothetical protein YP_003124006.1 PFAM: hypothetical protein; KEGG: mms:mma_1623 diguanylate cyclase YP_003124009.1 PFAM: protein of unknown function DUF336; KEGG: ret:RHE_CH02038 hypothetical protein YP_003124010.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH02037 short chain dehydrogenase YP_003124011.1 KEGG: afw:Anae109_3358 ketosteroid isomerase- related protein-like protein YP_003124012.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ppd:Ppro_3010 signal transduction histidine kinase YP_003124013.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: pca:Pcar_2345 two component signal transduction response regulator YP_003124014.1 PFAM: pirin; KEGG: hne:HNE_1491 pirin family protein YP_003124015.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003124016.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003124019.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein YP_003124020.1 PFAM: FecR protein; KEGG: rru:Rru_A2396 FecR YP_003124021.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bcz:BCZK1921 RNA polymerase sigma factor YP_003124023.1 KEGG: mlo:mlr0480 hypothetical protein YP_003124025.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_0499 AraC family transcriptional regulator YP_003124026.1 KEGG: hch:HCH_04393 hypothetical protein YP_003124027.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003124028.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa0320 short chain alcohol dehydrogenase- related dehydrogenase YP_003124029.1 KEGG: maq:Maqu_2145 hypothetical protein YP_003124030.1 KEGG: maq:Maqu_2145 hypothetical protein YP_003124031.1 KEGG: cak:Caul_5183 hypothetical protein YP_003124032.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01810 methylphosphotriester-DNA alkyltransferase/transcriptional regulator YP_003124033.1 KEGG: hypothetical protein YP_003124035.1 KEGG: hypothetical protein YP_003124036.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein YP_003124039.1 KEGG: swd:Swoo_3656 hypothetical protein YP_003124041.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sil:SPO0571 PKD domain-containing protein YP_003124042.1 KEGG: cps:CPS_4002 hypothetical protein YP_003124043.1 PFAM: peptidase C19 ubiquitin carboxyl-terminal hydrolase 2; KEGG: Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase YP_003124045.1 PFAM: PKD domain containing protein; cytochrome C class I; SMART: PKD domain containing protein; KEGG: sde:Sde_0722 Crp/Fnr family transcriptional regulator YP_003124047.1 PFAM: NUDIX hydrolase; KEGG: scl:sce2352 hypothetical protein YP_003124048.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mpt:Mpe_A3464 hypothetical protein YP_003124049.1 PFAM: pseudouridine synthase; KEGG: swd:Swoo_0913 pseudouridine synthase YP_003124050.1 KEGG: bsu:BSU39230 cell wall-associated protein precursor (CWBP200, 105, 62) YP_003124051.1 KEGG: ppr:PBPRA1982 hypothetical protein YP_003124052.1 KEGG: hypothetical protein YP_003124053.1 PFAM: cupin; KEGG: hypothetical protein YP_003124054.1 KEGG: gbm:Gbem_1849 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003124055.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_1429 phosphate ABC transporter, inner membrane subunit PstA YP_003124056.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1061 phosphate ABC transporter permease YP_003124057.1 KEGG: afw:Anae109_0418 phosphate binding protein YP_003124059.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sil:SPO0571 PKD domain-containing protein YP_003124060.1 KEGG: sus:Acid_3106 hypothetical protein YP_003124061.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: sus:Acid_1808 TonB-dependent receptor YP_003124063.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124064.1 PFAM: RagB/SusD domain protein YP_003124065.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003124066.1 KEGG: met:M446_1053 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003124067.1 PFAM: MCP methyltransferase CheR-type; CheB methylesterase; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein; KEGG: cti:RALTA_B0792 chemotaxis methyltransferase protein; contains methylesterase domain (CheB), methylase of chemotaxis methyl-accepting proteins domain (CheR), signal transduction histidine domain (NitrB), signal receiver (Rec) domain YP_003124068.1 PFAM: CheB methylesterase; KEGG: pna:Pnap_3575 CheB methylesterase YP_003124069.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nar:Saro_2281 two component transcriptional regulator YP_003124072.1 KEGG: GE26306 gene product from transcript GE26306- RA YP_003124075.1 KEGG: aba:Acid345_4491 hypothetical protein YP_003124078.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vvy:VV2628 acetyltransferase YP_003124079.1 PFAM: protein of unknown function DUF72; KEGG: ank:AnaeK_0831 protein of unknown function DUF72 YP_003124081.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet2880 LysR family transcriptional regulator YP_003124082.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppw:PputW619_2449 major facilitator transporter YP_003124083.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003124084.1 PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: ADD1.2; ATP-dependent DNA helicase; K01152 type I restriction enzyme YP_003124086.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: mch:Mchl_3368 alcohol dehydrogenase GroES domain protein YP_003124087.1 KEGG: mch:Mchl_3369 hypothetical protein YP_003124088.1 KEGG: xop:PXO_00038 hypothetical protein YP_003124089.1 PFAM: YCII-related; KEGG: saz:Sama_1725 hypothetical protein YP_003124090.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: gbm:Gbem_1200 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003124091.1 PFAM: protein of unknown function DUF323; KEGG: pmy:Pmen_4037 hypothetical protein YP_003124092.1 TIGRFAM: methyltransferase; KEGG: swd:Swoo_2444 hypothetical protein YP_003124093.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: NADPH:quinone reductase and related Zn- dependent oxidoreductases YP_003124094.1 KEGG: swp:swp_3501 ketosteroid isomerase-like protein YP_003124095.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcb:BCB4264_A3769 transporter, drug/metabolite exporter family YP_003124096.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: aha:AHA_2106 YbaK/prolyl-tRNA synthetase domain-containing protein YP_003124097.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: ppd:Ppro_2208 sulphate transporter YP_003124098.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003124099.1 PFAM: DinB family protein; KEGG: sus:Acid_7400 DinB family protein YP_003124100.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: mlo:mll1975 cinnamoyl-CoA reductase YP_003124101.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003124102.1 KEGG: hypothetical protein YP_003124103.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: swp:swp_4142 probable cytochrome-c peroxidase YP_003124105.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003124106.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase YP_003124107.1 KEGG: hypothetical protein YP_003124108.1 KEGG: gdj:Gdia_1062 hypothetical protein YP_003124109.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: sew:SeSA_A2204 cobyrinic acid a,c-diamide synthase YP_003124110.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_003124111.1 PFAM: aminotransferase class I and II; KEGG: gbm:Gbem_3537 L-threonine-O-3-phosphate decarboxylase YP_003124112.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: kpn:KPN_03199 cobalamin biosynthesis protein YP_003124113.1 KEGG: bha:BH0367 hypothetical protein YP_003124114.1 KEGG: rme:Rmet_1533 high-affinity nickel- transporter YP_003124115.1 KEGG: vfi:VF_1388 epimerase YP_003124116.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: hch:HCH_06472 hypothetical protein YP_003124117.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mca:MCA2295 precorrin-2 C20-methyltransferase YP_003124118.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: precorrin-8X methylmutase CbiC/CobH; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: vsp:VS_2667 precorrin-3B methylase CobJ YP_003124119.1 KEGG: gme:Gmet_0481 precorrin-6Y C5,15- methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15- methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003124120.1 KEGG: sfu:Sfum_2129 precorrin-4 C11- methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003124121.1 PFAM: precorrin-6x reductase CbiJ/CobK; KEGG: yen:YE2717 cobalt-precorrin-6x reductase YP_003124122.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: pen:PSEEN4873 cobalt-precorrin-6A synthase YP_003124123.1 KEGG: mpt:Mpe_A3299 urease accessory protein YP_003124124.1 KEGG: pfo:Pfl01_3097 protoporphyrin IX magnesium- chelatase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003124125.1 SMART: von Willebrand factor type A; KEGG: rso:RS03742 chelatase protein YP_003124126.1 PFAM: cobalbumin biosynthesis protein; KEGG: mmw:Mmwyl1_3675 adenosylcobinamide-phosphate guanylyltransferase YP_003124127.1 KEGG: dar:Daro_0148 nicotinate-nucleotide-- dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazolep hosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003124128.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: dar:Daro_0149 cobalamin synthase YP_003124129.1 PFAM: phosphoglycerate mutase; KEGG: dar:Daro_0151 phosphoglycerate/bisphosphoglycerate mutase YP_003124130.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mxa:MXAN_5941 ATP:cob(I)alamin adenosyltransferase YP_003124131.1 KEGG: pst:PSPTO_3149 cobaltochelatase; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase YP_003124132.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bmc:BAbS19_I12400 dynamin YP_003124133.1 KEGG: bur:Bcep18194_C6674 hypothetical protein YP_003124134.1 KEGG: bur:Bcep18194_C6675 hypothetical protein YP_003124135.1 PFAM: Radical SAM domain protein; KEGG: bur:Bcep18194_C6677 radical SAM family protein YP_003124136.1 PFAM: monooxygenase FAD-binding; tryptophan halogenase; KEGG: bur:Bcep18194_C6678 tryptophan halogenase YP_003124137.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE YP_003124138.1 KEGG: sus:Acid_7167 hypothetical protein YP_003124139.1 PFAM: RagB/SusD domain protein YP_003124140.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124141.1 PFAM: FecR protein; KEGG: abu:Abu_1453 sigma factor regulatory protein FecR/PupR family YP_003124142.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bra:BRADO2612 RNA polymerase sigma factor YP_003124143.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: abc:ACICU_00957 hypothetical protein YP_003124144.1 PFAM: glycoside hydrolase family 43; KEGG: pat:Patl_0810 carbohydrate-binding family 6 protein YP_003124146.1 PFAM: RagB/SusD domain protein YP_003124147.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124148.1 KEGG: hypothetical protein YP_003124149.1 KEGG: pne:Pnec_1144 hypothetical protein YP_003124150.1 KEGG: rme:Rmet_1657 conserved hypothetical protein- transmembrane prediction YP_003124154.1 PFAM: beta-lactamase; glycoside hydrolase family 13 domain protein; hypothetical protein; KEGG: aba:Acid345_0612 beta-lactamase YP_003124155.1 PFAM: major royal jelly protein; KEGG: pfo:Pfl01_2714 hypothetical protein YP_003124158.1 KEGG: hypothetical protein YP_003124163.1 KEGG: pol:Bpro_2643 hypothetical protein YP_003124164.1 PFAM: ROK family protein; KEGG: gbe:GbCGDNIH1_0537 polyphosphate glucokinase YP_003124165.1 KEGG: mxa:MXAN_4747 lipoprotein YP_003124166.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124169.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003124170.1 KEGG: rlt:Rleg2_5337 heparinase II/III family protein YP_003124171.1 KEGG: afw:Anae109_3266 hypothetical protein YP_003124174.1 PFAM: RagB/SusD domain protein YP_003124175.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124176.1 PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator YP_003124177.1 PFAM: aldo/keto reductase; KEGG: eca:ECA3293 oxidoreductase YP_003124178.1 PFAM: carboxylesterase type B; KEGG: scl:sce4709 carboxylesterase YP_003124179.1 PFAM: alpha/beta hydrolase; KEGG: pol:Bpro_1382 alpha/beta hydrolase YP_003124180.1 PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator YP_003124181.1 PFAM: alpha/beta hydrolase; KEGG: bxe:Bxe_B0550 alpha/beta family hydrolase YP_003124182.1 PFAM: AsmA family protein; KEGG: hypothetical protein YP_003124183.1 KEGG: similar to glycoamidase gene YP_003124184.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: scl:sce7221 ECF family RNA polymerase sigma factor YP_003124185.1 KEGG: hypothetical protein YP_003124186.1 PFAM: aminotransferase class V; KEGG: smd:Smed_1213 aminotransferase class V YP_003124187.1 KEGG: lpc:LPC_2635 hypothetical protein YP_003124188.1 KEGG: sde:Sde_0569 hypothetical protein YP_003124189.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; regulatory protein LuxR; KEGG: bja:blr3042 RNA polymerase sigma factor YP_003124190.1 PFAM: FecR protein; KEGG: rru:Rru_A1439 FecR YP_003124191.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124192.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003124193.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hch:HCH_02597 thiol-disulfide isomerase and thioredoxins YP_003124194.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sat:SYN_00775 two-component response regulator YP_003124195.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: hch:HCH_00418 signal transduction histidine kinase YP_003124196.1 KEGG: sbo:SBO_0509 hypothetical protein YP_003124197.1 KEGG: hypothetical protein YP_003124199.1 PFAM: glycoside hydrolase family 35; glycoside hydrolase family 42 domain protein; KEGG: xca:xccb100_1257 exported beta-galactosidase YP_003124200.1 KEGG: scl:sce0966 hypothetical protein YP_003124201.1 PFAM: RagB/SusD domain protein YP_003124202.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124203.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; helix- turn-helix- domain containing protein AraC type; histidine kinase A domain protein; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein YP_003124204.1 PFAM: acyltransferase 3; KEGG: eta:ETA_27190 O-antigen acetylase YP_003124205.1 PFAM: dienelactone hydrolase; BAAT/acyl-CoA thioester hydrolase; KEGG: rec:RHECIAT_PA0000292 probable dienelactone hydrolase protein YP_003124206.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_0755 short-chain dehydrogenase/reductase SDR YP_003124207.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rlt:Rleg2_0435 short-chain dehydrogenase/reductase SDR YP_003124208.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003124209.1 PFAM: acyltransferase 3; KEGG: acyltransferase family protein YP_003124210.1 KEGG: sun:SUN_0739 hypothetical protein YP_003124211.1 PFAM: alpha/beta hydrolase; KEGG: bce:BC2171 proline iminopeptidase YP_003124213.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hch:HCH_03203 transcriptional regulator YP_003124214.1 PFAM: activator of Hsp90 ATPase 1 family protein; 3- demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hch:HCH_03204 hypothetical protein YP_003124215.1 PFAM: beta-lactamase domain protein; KEGG: sus:Acid_5130 beta-lactamase domain- containing protein YP_003124216.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_0589 short-chain dehydrogenase/reductase SDR YP_003124217.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mxa:MXAN_2267 oxidoreductase, 2-nitropropane dioxygenase family YP_003124218.1 KEGG: cps:CPS_2672 hypothetical protein YP_003124219.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: scl:sce0991 dehydrogenase with different specifities YP_003124220.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: har:HEAR3241 tautomerase K2 YP_003124221.1 PFAM: YceI family protein; KEGG: bba:Bd2001 YCE I like family protein YP_003124222.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003124223.1 TIGRFAM: hypothetical protein; PFAM: hypothetical protein; KEGG: hch:HCH_03533 rhs family protein YP_003124225.1 PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: hypothetical protein YP_003124226.1 PFAM: protein of unknown function DUF980; KEGG: sde:Sde_1548 phenylalanyl-tRNA synthetase, alpha subunit YP_003124227.1 PFAM: Dak kinase; Dak phosphatase; KEGG: mlo:mll5296 dihydroxyacetone kinase YP_003124228.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003124229.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: acp:A2cp1_1323 alcohol dehydrogenase GroES domain protein YP_003124230.1 KEGG: hypothetical protein; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase YP_003124231.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_3450 GCN5-related N- acetyltransferase YP_003124232.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bba:Bd1451 MarR family transcriptional regulator YP_003124233.1 PFAM: beta-lactamase; KEGG: aba:Acid345_0612 beta-lactamase YP_003124234.1 KEGG: sal:Sala_0018 hypothetical protein YP_003124235.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oca:OCAR_6973 acetyltransferase, GNAT family YP_003124236.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A2547 transcriptional regulator, MarR family YP_003124237.1 KEGG: bbt:BBta_2759 hypothetical protein YP_003124239.1 PFAM: sulfatase; KEGG: pat:Patl_2695 sulfatase YP_003124240.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abc:ACICU_03092 hypothetical protein YP_003124242.1 KEGG: eli:ELI_09660 DNA-binding protein YP_003124244.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vsp:VS_II0528 transcriptional regulator, AraC/XylS family YP_003124245.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003124246.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003124247.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bra:BRADO0018 short-chain dehydrogenases/reductases (SDR) family protein YP_003124248.1 PFAM: glycoside hydrolase family 43; glycosyl hydrolase family 32 domain protein; KEGG: hypothetical protein YP_003124249.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor YP_003124250.1 PFAM: FecR protein; KEGG: nwi:Nwi_3080 FecR protein YP_003124251.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124252.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003124254.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003124256.1 KEGG: mxa:MXAN_2189 hypothetical protein YP_003124257.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: cps:CPS_1680 short chain dehydrogenase/reductase family oxidoreductase YP_003124258.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A2547 transcriptional regulator, MarR family YP_003124259.1 PFAM: protein of unknown function DUF1680; KEGG: hypothetical protein YP_003124260.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll2997 short chain dehydrogenase YP_003124261.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cps:CPS_4655 AraC family transcriptional regulator YP_003124262.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family YP_003124263.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: rde:RD1_2498 pyridoxamine 5'-phosphate oxidase family protein YP_003124264.1 KEGG: hypothetical protein; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003124265.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4302 GntR family transcriptional regulator YP_003124266.1 KEGG: saz:Sama_0438 signal transduction histidine kinase-like protein YP_003124267.1 PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pcr:Pcryo_0937 hypothetical protein YP_003124268.1 KEGG: mxa:MXAN_4430 hypothetical protein YP_003124269.1 KEGG: scl:sce1184 hypothetical protein YP_003124270.1 PFAM: alpha/beta hydrolase; KEGG: mpo:Mpop_3187 alpha/beta hydrolase YP_003124271.1 PFAM: cyclic nucleotide-binding; KEGG: sde:Sde_3995 cyclic nucleotide-binding protein YP_003124272.1 PFAM: protein of unknown function DUF1486; KEGG: bph:Bphy_5476 hypothetical protein YP_003124273.1 PFAM: protein of unknown function DUF805; KEGG: pst:PSPTO_0278 hypothetical protein YP_003124274.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_3196 bifunctional deaminase- reductase-like YP_003124275.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3- methyltransferase; KEGG: aci:ACIAD0693 hypothetical protein YP_003124277.1 PFAM: major facilitator superfamily MFS_1; KEGG: swd:Swoo_0364 major facilitator transporter YP_003124278.1 PFAM: RagB/SusD domain protein YP_003124279.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124282.1 KEGG: hypothetical protein YP_003124283.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003124286.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003124288.1 PFAM: protein of unknown function DUF159; KEGG: bsu:BSU20490 hypothetical protein YP_003124291.1 KEGG: hypothetical protein YP_003124293.1 PFAM: CheB methylesterase; KEGG: reu:Reut_B4915 PAS YP_003124294.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eba:ebA6392 response regulator YP_003124295.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: bpd:BURPS668_A0089 RNA polymerase sigma factor YP_003124297.1 KEGG: neu:NE1591 hypothetical protein YP_003124298.1 PFAM: FecR protein; KEGG: nwi:Nwi_0657 FecR protein YP_003124299.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124300.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; KEGG: afr:AFE_2205 Na+/H+ antiporter NhaA YP_003124301.1 KEGG: dsh:Dshi_0010 hypothetical protein YP_003124302.1 PFAM: conserved hypothetical protein; KEGG: bcj:BCAS0106 hypothetical protein YP_003124303.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: dal:Dalk_1399 short-chain dehydrogenase/reductase SDR YP_003124304.1 PFAM: protein of unknown function DUF62; KEGG: sus:Acid_0601 hypothetical protein YP_003124305.1 KEGG: gsu:GSU1489 hypothetical protein YP_003124306.1 KEGG: prw:PsycPRwf_1317 hypothetical protein YP_003124307.1 PFAM: xylose isomerase; KEGG: sus:Acid_4406 xylose isomerase domain- containing protein YP_003124308.1 KEGG: aba:Acid345_3257 von Willebrand factor, type A YP_003124309.1 KEGG: sus:Acid_2208 magnesium protoporphyrin chelatase YP_003124310.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_7068 oxidoreductase domain- containing protein YP_003124311.1 PFAM: ankyrin; SMART: ankyrin; KEGG: gbe:GbCGDNIH1_1865 ankyrin YP_003124312.1 PFAM: metallophosphoesterase; KEGG: gdi:GDI1164 hypothetical protein YP_003124313.1 PFAM: ABC transporter related; KEGG: ABC transporter related; K01996 branched- chain amino acid transport system ATP-binding protein YP_003124315.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dar:Daro_0099 GCN5-related N- acetyltransferase:carbonic anhydrase YP_003124316.1 PFAM: protein of unknown function DUF1486; KEGG: bvi:Bcep1808_4732 hypothetical protein YP_003124317.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cju:C8J_0979 transcriptional regulatory protein YP_003124318.1 KEGG: spe:Spro_3058 NAD-dependent epimerase/dehydratase YP_003124319.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sec:SC3938 transcriptional activator RhaS YP_003124322.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dehydrogenase protein YP_003124323.1 PFAM: regulatory protein TetR; KEGG: bba:Bd2071 TetR family transcriptional regulator YP_003124324.1 PFAM: protein of unknown function DUF92 transmembrane; KEGG: Os01g0729100; hypothetical protein YP_003124325.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A1868 acetyltransferase, GNAT family YP_003124326.1 KEGG: afw:Anae109_3731 hypothetical protein YP_003124327.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_0667 EmrB/QacA family drug resistance transporter YP_003124329.1 KEGG: sus:Acid_4522 DoxX family protein YP_003124330.1 PFAM: cyclic nucleotide-binding; KEGG: hch:HCH_05578 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase YP_003124331.1 PFAM: purine or other phosphorylase family 1; KEGG: lpf:lpl1367 hypothetical protein YP_003124332.1 KEGG: sat:SYN_00169 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003124333.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: dvm:DvMF_1055 Mg2 transporter protein CorA family protein YP_003124334.1 PFAM: NUDIX hydrolase; KEGG: bat:BAS2718 MutT/NUDIX family protein YP_003124335.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: smt:Smal_2921 hypothetical protein YP_003124337.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_2573 glycosyl transferase family 2 YP_003124339.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003124340.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR YP_003124341.1 PFAM: glycosyl transferase family 2; KEGG: nha:Nham_3032 glycosyl transferase family protein YP_003124342.1 PFAM: polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 cytosol aminopeptidase YP_003124343.1 PFAM: glycosyl transferase family 2; KEGG: rms:RMA_0635 glycosyl transferase YP_003124344.1 KEGG: mms:mma_2283 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003124345.1 PFAM: glycosyl transferase group 1; KEGG: asa:ASA_0094 glycosyl transferase family protein YP_003124346.1 PFAM: NLP/P60 protein; KEGG: shl:Shal_0052 NLP/P60 protein YP_003124347.1 KEGG: glo:Glov_2723 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_003124348.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain protein; KEGG: thioredoxin; K03671 thioredoxin 1 YP_003124349.1 KEGG: sbm:Shew185_0166 outer membrane adhesin like protein YP_003124350.1 KEGG: hypothetical protein YP_003124351.1 PFAM: Radical SAM domain protein; KEGG: ank:AnaeK_0400 radical SAM domain protein YP_003124352.1 PFAM: protein of unknown function DUF192; KEGG: nha:Nham_2141 hypothetical protein YP_003124353.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: ecw:EcE24377A_4549 transcriptional regulatory protein ZraR YP_003124354.1 TIGRFAM: membrane-bound dehydrogenase domain protein; KEGG: rso:RS02321 hypothetical protein YP_003124355.1 PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: xca:xccb100_3588 broadly selective sodium/nucleoside cotransporter YP_003124356.1 KEGG: cak:Caul_3403 hypothetical protein YP_003124357.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: gbm:Gbem_0962 chromosome segregation protein SMC YP_003124358.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: bur:Bcep18194_A4321 protein of unknown function DUF893, YccS/YhfK YP_003124359.1 KEGG: ban:BA4058 hypothetical protein YP_003124360.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_003124361.1 KEGG: bha:BH1085 starch ( glycogen) synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: starch synthase catalytic domain protein; glycosyl transferase group 1 YP_003124362.1 PFAM: protein of unknown function DUF72; KEGG: aha:AHA_1520 hypothetical protein YP_003124363.1 PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_1924 FAD linked oxidase-like YP_003124364.1 PFAM: Protein of unknown function DUF706; KEGG: sus:Acid_4072 inositol oxygenase YP_003124365.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: vfm:VFMJ11_A0389 sodium/glucose cotransporter YP_003124366.1 KEGG: ppr:PBPRB0521 hypothetical protein YP_003124367.1 PFAM: terpene synthase metal-binding domain protein; KEGG: scl:sce6369 pentalenene synthase YP_003124368.1 KEGG: eca:ECA2789 isopentenyl-diphosphate delta-isomerase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase YP_003124369.1 KEGG: gafA; GAF domain-containing protein YP_003124370.1 KEGG: sun:SUN_1558 capsular polysaccharide biosynthesis protein YP_003124371.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: wsu:WS0054 UDP-glucose 6- dehydrogenase YP_003124372.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: sfu:Sfum_1664 two component transcriptional regulator, LuxR family YP_003124374.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: gme:Gmet_2223 NifA subfamily transcriptional regulator YP_003124376.1 KEGG: reu:Reut_A3308 hypothetical protein YP_003124377.1 KEGG: aba:Acid345_2908 secreted glycosyl hydrolase YP_003124379.1 PFAM: SWIB/MDM2 domain protein; SMART: SWIB/MDM2 domain protein; KEGG: bpt:Bpet0685 hypothetical protein YP_003124381.1 PFAM: acyltransferase 3; KEGG: gdj:Gdia_1872 acyltransferase 3 YP_003124382.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ftn:FTN_1428 transferase YP_003124383.1 PFAM: glycosyl transferase family 4; KEGG: rcm:A1E_05300 undecaprenyl-phosphate alpha-N- acetylglucosaminyltransferase YP_003124384.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: esa:ESA_01176 hypothetical protein YP_003124385.1 PFAM: glycosyl transferase group 1; KEGG: vfi:VF_0194 glycosyl transferases group 1- like protein YP_003124386.1 KEGG: gbm:Gbem_1623 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003124387.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bcr:BCAH187_A5443 NAD-dependent epimerase/dehydratase YP_003124389.1 PFAM: polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: polysaccharide biosynthesis protein CapD YP_003124390.1 PFAM: glycosyl transferase group 1; KEGG: vvy:VV0348 hypothetical protein YP_003124391.1 KEGG: mlo:mll7617 hypothetical protein YP_003124392.1 PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_3023 glycosyl transferase, group 1 YP_003124393.1 KEGG: glo:Glov_1505 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003124394.1 KEGG: rle:RL0817 transmembrane protein YP_003124395.1 PFAM: polysaccharide biosynthesis protein; KEGG: sun:SUN_0096 polysaccharide biosynthesis protein YP_003124396.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mgm:Mmc1_2424 oxidoreductase domain protein YP_003124397.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cco:CCC13826_0541 hexapaptide repeat- containing transferase YP_003124398.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class I and II; aromatic amino acid beta- eliminating lyase/threonine aldolase; KEGG: pca:Pcar_1257 pyridoxal phosphate-dependent enzyme YP_003124399.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: nis:NIS_0283 UDP-glucose/GDP-mannose dehydrogenase YP_003124400.1 KEGG: sun:SUN_1559 capsular polysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_003124401.1 KEGG: sun:SUN_1740 polysaccharide export system outer membrane protein YP_003124402.1 PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein YP_003124407.1 PFAM: LytTr DNA-binding region; KEGG: amc:MADE_01349 regulatory protein YP_003124411.1 PFAM: Domain of unknown function DUF1813 HSP20- like; KEGG: cti:RALTA_A2680 hypothetical protein YP_003124412.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pfl:PFL_0167 DNA-binding protein YP_003124413.1 KEGG: bcj:BCAS0686 hypothetical protein YP_003124416.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pfl:PFL_0167 DNA-binding protein YP_003124418.1 KEGG: hypothetical protein YP_003124419.1 PFAM: integrase family protein; KEGG: neu:NE1458 phage integrase domain/SAM domain- containing protein YP_003124420.1 PFAM: integrase family protein; KEGG: rso:RS05531 site-specific tyrosine recombinase XerC YP_003124421.1 PFAM: zinc finger CHC2-family protein; SMART: zinc finger CHC2-family protein; KEGG: eca:ECA3416 DnaG primase-like protein YP_003124422.1 PFAM: Domain of unknown function DUF1813 HSP20- like; KEGG: cti:RALTA_A2680 hypothetical protein YP_003124423.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pfl:PFL_0167 DNA-binding protein YP_003124424.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003124425.1 KEGG: hypothetical protein YP_003124426.1 PFAM: PA14 domain protein; SMART: PA14 domain protein; KEGG: cja:CJA_2385 MSHA biogenesis protein MshQ YP_003124427.1 KEGG: similar to CAP-Gly domain-containing linker protein 1 (Restin) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Cytoplasmic linker protein 1) YP_003124432.1 PFAM: ThiJ/PfpI domain protein; KEGG: rle:RL0311 DJ-1/PfPI family protein YP_003124433.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: xca:xccb100_0045 hypothetical protein YP_003124434.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003124435.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B1231 RND efflux system outer membrane lipoprotein YP_003124436.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: dvm:DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_003124437.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: afw:Anae109_0569 RND family efflux transporter MFP subunit YP_003124438.1 PFAM: manganese and iron superoxide dismutase; KEGG: xca:xccb100_0423 exported superoxide dismutase YP_003124439.1 KEGG: bte:BTH_II1289 hypothetical protein YP_003124442.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpe:BP2133 transmembrane efflux protein YP_003124443.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: efe:EFER_3470 transcriptional regulator YP_003124444.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_0772 acetyltransferase YP_003124445.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: mxa:MXAN_7072 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein YP_003124446.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: cak:Caul_2133 glycoside hydrolase family protein YP_003124447.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124448.1 PFAM: RagB/SusD domain protein YP_003124449.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124452.1 PFAM: RagB/SusD domain protein YP_003124453.1 PFAM: RagB/SusD domain protein YP_003124454.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124455.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2651 alpha-1,2-mannosidase family protein YP_003124456.1 PFAM: lipolytic protein G-D-S-L family; KEGG: pat:Patl_0828 lipolytic enzyme, G-D-S-L YP_003124457.1 PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; KEGG: rec:RHECIAT_PC0000709 alpha- mannosidase protein YP_003124458.1 PFAM: RagB/SusD domain protein YP_003124459.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124460.1 PFAM: FecR protein; KEGG: pap:PSPA7_2872 transmembrane sensor YP_003124461.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: xau:Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor YP_003124462.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: saz:Sama_0293 alpha-1,2-mannosidase YP_003124463.1 PFAM: Ricin B lectin; KEGG: scl:sce4592 alpha-L-arabinofuranosidase precursor YP_003124464.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hch:HCH_03203 transcriptional regulator YP_003124465.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMc01149 hypothetical protein YP_003124466.1 KEGG: scl:sce6314 hypothetical protein YP_003124467.1 PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: smt:Smal_1231 protein of unknown function DUF6 transmembrane YP_003124470.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr1595 short chain dehydrogenase YP_003124471.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003124472.1 PFAM: FAD linked oxidase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bra:BRADO2247 oxidoreductase YP_003124473.1 PFAM: helix-turn-helix domain protein; cupin; SMART: helix-turn-helix domain protein; KEGG: sfu:Sfum_1154 transcriptional regulator, XRE family YP_003124474.1 TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_1285 FAD dependent oxidoreductase YP_003124475.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: predicted protein YP_003124476.1 KEGG: mex:Mext_0136 diguanylate cyclase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat- containing protein YP_003124477.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ect:ECIAI39_0671 short-chain dehydrogenase/reductase SDR precursor YP_003124478.1 KEGG: ccs:CCNA_02891 beta-galactosidase; TIGRFAM: mannonate dehydratase; PFAM: Mannonate dehydratase; xylose isomerase YP_003124479.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator YP_003124480.1 KEGG: pzu:PHZ_c2479 hypothetical protein YP_003124481.1 PFAM: glycoside hydrolase family 43; KEGG: sde:Sde_0822 alpha-L-arabinofuranosidase YP_003124482.1 PFAM: protein of unknown function DUF303 acetylesterase ; glycoside hydrolase family 2 sugar binding; KEGG: cja:CJA_3164 sialic acid-specific 9-O- acetylesterase YP_003124483.1 PFAM: RagB/SusD domain protein YP_003124484.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124485.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; KEGG: cps:CPS_0756 sensory box sensor histidine kinase/DNA-binding response regulator YP_003124486.1 PFAM: histidine kinase dimerisation/phosphoacceptor; hypothetical protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: ppd:Ppro_1972 signal transduction histidine kinase YP_003124487.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: ppd:Ppro_3009 hypothetical protein YP_003124488.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: dal:Dalk_0340 two component, sigma54 specific, transcriptional regulator, Fis family YP_003124489.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: transcriptional regulator, NifA subfamily, Fis family YP_003124490.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_1703 hypothetical protein YP_003124491.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: rme:Rmet_1657 conserved hypothetical protein- transmembrane prediction YP_003124492.1 PFAM: protein of unknown function DUF303 acetylesterase KEGG: sus:Acid_3201 sialate O-acetylesterase YP_003124493.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL3904 AraC family transcriptional regulator YP_003124494.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: swd:Swoo_2967 alcohol dehydrogenase YP_003124496.1 KEGG: viral A-type inclusion protein YP_003124497.1 SMART: Hedgehog/intein hint domain protein; KEGG: cvi:CV_2869 hemagglutinin-related protein YP_003124499.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: gsu:GSU0983 hypothetical protein YP_003124500.1 KEGG: plu:plu3098 hypothetical protein YP_003124503.1 KEGG: pca:Pcar_2819 hypothetical protein YP_003124505.1 PFAM: GPW/gp25 family protein; KEGG: plu:plu2393 hypothetical protein YP_003124507.1 KEGG: hypothetical protein YP_003124508.1 KEGG: hypothetical protein YP_003124509.1 PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bbt:BBta_7789 chaperone ClpB YP_003124510.1 KEGG: ent:Ent638_4236 von Willebrand factor, type A YP_003124511.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sil:SPO0571 PKD domain-containing protein YP_003124513.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sat:SYN_00032 cell wall degradation protein YP_003124514.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: xau:Xaut_1334 alcohol dehydrogenase YP_003124515.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: mlo:mll6688 hypothetical protein YP_003124516.1 PFAM: sulfatase; KEGG: gur:Gura_1625 sulfatase YP_003124517.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rde:RD1_2601 transcriptional regulator CtrA YP_003124518.1 PFAM: histidine kinase A domain protein; ATP- binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP- binding region ATPase domain protein; KEGG: sty:STY1127 histidine kinase YP_003124519.1 PFAM: TonB-dependent receptor plug; KEGG: pzu:PHZ_c3264 TonB-dependent receptor YP_003124520.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: eba:ebA3111 exonuclease SbcD YP_003124521.1 PFAM: SMC domain protein; KEGG: pfl:PFL_2729 nuclease SbcCD, C subunit YP_003124522.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: dol:Dole_1445 lipid A biosynthesis acyltransferase YP_003124523.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nmu:Nmul_A1288 response regulator receiver domain-containing protein YP_003124524.1 KEGG: hypothetical protein YP_003124527.1 KEGG: sus:Acid_1463 hypothetical protein YP_003124531.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A1489 short chain dehydrogenase YP_003124532.1 PFAM: regulatory protein TetR; KEGG: rme:Rmet_4307 transcriptional regulator, TetR family YP_003124533.1 PFAM: hypothetical protein; KEGG: mag:amb1460 microcystin-dependent protein YP_003124534.1 PFAM: hypothetical protein; KEGG: cja:CJA_0593 microcystin dependent protein; MdpB YP_003124535.1 PFAM: hypothetical protein; KEGG: cja:CJA_0593 microcystin dependent protein; MdpB YP_003124536.1 PFAM: formyl transferase; KEGG: ppd:Ppro_0055 methionyl-tRNA formyltransferase YP_003124539.1 PFAM: asparagine synthase; KEGG: mlo:mll5256 asparagine synthetase YP_003124540.1 KEGG: gur:Gura_1356 hypothetical protein YP_003124541.1 KEGG: mag:amb1453 hypothetical protein YP_003124542.1 KEGG: ppd:Ppro_0048 hypothetical protein YP_003124543.1 KEGG: ppd:Ppro_0062 hypothetical protein YP_003124544.1 PFAM: coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; KEGG: cja:CJA_2985 glycoside hydrolase, , gly16A YP_003124545.1 KEGG: afe:Lferr_0291 hypothetical protein YP_003124546.1 PFAM: spore coat protein CotH; KEGG: scl:sce8379 hypothetical protein YP_003124547.1 PFAM: transcription activator effector binding; KEGG: sdn:Sden_1132 transcription activator, effector binding YP_003124548.1 KEGG: pol:Bpro_5314 YapH protein YP_003124549.1 KEGG: pol:Bpro_5311 hypothetical protein YP_003124550.1 KEGG: bcj:BCAS0321 hypothetical glycine-rich autotransporter protein YP_003124551.1 KEGG: nar:Saro_1212 hypothetical protein YP_003124552.1 KEGG: pol:Bpro_5310 hypothetical protein YP_003124553.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: jan:Jann_2598 hypothetical protein YP_003124554.1 PFAM: protein of unknown function DUF162; KEGG: acp:A2cp1_3175 protein of unknown function DUF162 YP_003124555.1 PFAM: protein of unknown function DUF162; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: acp:A2cp1_3174 protein of unknown function DUF162 YP_003124556.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: gox:GOX1356 oxidoreductase, iron-sulphur binding subunit YP_003124557.1 PFAM: carbohydrate kinase FGGY; KEGG: dsh:Dshi_2429 carbohydrate kinase FGGY YP_003124558.1 PFAM: xylose isomerase; KEGG: rlt:Rleg2_5806 L-rhamnose catabolism isomerase YP_003124559.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; class II aldolase/adducin family protein; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: dsh:Dshi_2436 short chain dehydrogenase YP_003124560.1 transports L-rhamnose and L-lyxose into the cell YP_003124562.1 KEGG: hch:HCH_04931 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003124563.1 PFAM: Luciferase-like monooxygenase; KEGG: bsu:BSU38100 hypothetical protein YP_003124564.1 KEGG: mca:MCA1928 hypothetical protein YP_003124565.1 KEGG: noc:Noc_1350 hypothetical protein YP_003124566.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sus:Acid_5478 integral membrane sensor signal transduction histidine kinase YP_003124567.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: vfi:VF_A0436 transcriptional regulatory protein YP_003124568.1 KEGG: mms:mma_1162 magnesium transporter accessory protein YP_003124569.1 KEGG: dps:DP1987 5'-3' DNA helicase YP_003124570.1 PFAM: protein of unknown function DUF62; KEGG: aha:AHA_0746 hypothetical protein YP_003124571.1 PFAM: protein of unknown function DUF326; KEGG: sew:SeSA_A1351 ferredoxin YP_003124572.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: hch:HCH_02572 guanosine polyphosphate pyrophosphohydrolase/synthetases YP_003124573.1 PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein YP_003124574.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_3037 ABC transporter-related protein YP_003124575.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_1129 RND family efflux transporter MFP subunit YP_003124576.1 PFAM: outer membrane efflux protein; KEGG: dal:Dalk_4861 outer membrane efflux protein YP_003124577.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sfu:Sfum_0490 transcriptional regulator, fis family YP_003124579.1 PFAM: alpha-L-arabinofuranosidase; carbohydrate-binding CenC domain protein; KEGG: sus:Acid_2992 alpha-N-arabinofuranosidase YP_003124580.1 KEGG: GJ14616 gene product from transcript GJ14616- RA YP_003124584.1 TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; haloacid dehalogenase; KEGG: ppd:Ppro_3639 heavy metal translocating P- type ATPase YP_003124585.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: smd:Smed_5215 helix-turn-helix-domain containing protein AraC type YP_003124586.1 KEGG: aba:Acid345_0928 alpha-2-macroglobulin-like YP_003124588.1 KEGG: pat:Patl_3604 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold- 3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein YP_003124589.1 PFAM: lycopene beta and epsilon cyclase; KEGG: pub:SAR11_0122 lycopene cyclase YP_003124590.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kpn:KPN_01489 regulatory protein MarR YP_003124591.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bha:BH1534 hypothetical protein YP_003124592.1 KEGG: gbm:Gbem_1803 eight transmembrane protein EpsH YP_003124593.1 KEGG: vvy:VVA1267 hypothetical protein YP_003124594.1 PFAM: protein of unknown function DUF427; KEGG: pnu:Pnuc_1659 hypothetical protein YP_003124595.1 Enables the enzymatic reduction of mercuric ions to elemental mercury YP_003124596.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_1447 ABC transporter-related protein YP_003124597.1 PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC- type glycine betaine transport system; KEGG: bcz:BCZK2060 glycine betaine/choline ABC transporter, ATP-binding protein YP_003124598.1 PFAM: protein of unknown function DUF323; KEGG: azo:azo0700 hypothetical protein YP_003124599.1 KEGG: swd:Swoo_2444 hypothetical protein YP_003124600.1 KEGG: aba:Acid345_2354 hypothetical protein YP_003124601.1 PFAM: regulatory protein TetR; KEGG: cvi:CV_2487 TetR family transcriptional regulator YP_003124602.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: hypothetical protein; K09458 3-oxoacyl- YP_003124603.1 KEGG: swp:swp_1441 hypothetical protein YP_003124604.1 KEGG: sus:Acid_3355 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003124605.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0829 response regulator receiver protein YP_003124608.1 PFAM: RagB/SusD domain protein YP_003124609.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124613.1 PFAM: carbohydrate-binding protein; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; PKD domain containing protein; hypothetical protein; KEGG: sat:SYN_01126 hypothetical protein YP_003124614.1 KEGG: aba:Acid345_0172 integral membrane protein YP_003124615.1 KEGG: scl:sce7877 hypothetical protein YP_003124616.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sus:Acid_6667 LysR family transcriptional regulator YP_003124618.1 KEGG: hypothetical protein YP_003124619.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: hypothetical protein YP_003124620.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: vha:VIBHAR_04777 NAD(P)H quinone oxidoreductase YP_003124621.1 PFAM: helix-turn-helix HxlR type; KEGG: oca:OCAR_5707 helix-turn-helix, HxlR type YP_003124622.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sus:Acid_2482 ECF subfamily RNA polymerase sigma-24 factor YP_003124624.1 KEGG: hch:HCH_00951 hypothetical protein YP_003124626.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124627.1 PFAM: RagB/SusD domain protein YP_003124628.1 KEGG: sde:Sde_3037 glycosyl hydrolase; PFAM: glycoside hydrolase, family 20, catalytic core; PA14 domain protein; beta-N-acetylhexosaminidase- like; SMART: PA14 domain protein YP_003124629.1 PFAM: pseudouridine synthase; KEGG: shl:Shal_0812 pseudouridine synthase YP_003124630.1 PFAM: protein of unknown function DUF1680; coagulation factor 5/8 type domain protein; KEGG: sus:Acid_3381 hypothetical protein YP_003124631.1 PFAM: beta-lactamase domain protein; KEGG: csa:Csal_2814 beta-lactamase-like protein YP_003124632.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: afw:Anae109_1010 acetyl-CoA hydrolase/transferase YP_003124633.1 PFAM: helix-turn-helix HxlR type; KEGG: ban:BA3457 hypothetical protein YP_003124634.1 PFAM: DSBA oxidoreductase; KEGG: scl:sce1376 DSBA oxidoreductase YP_003124635.1 KEGG: scl:sce6690 hypothetical protein YP_003124636.1 PFAM: peptidase S41; SMART: peptidase S41; KEGG: sus:Acid_0918 peptidase S41 YP_003124637.1 PFAM: conserved hypothetical protein; KEGG: bba:Bd1437 membrane protein YP_003124638.1 PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator YP_003124639.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bsu:BSU38540 involved in lipoteichoic acid biosynthesis YP_003124640.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_2706 EmrB/QacA family drug resistance transporter YP_003124641.1 PFAM: methyltransferase type 12; KEGG: abc:ACICU_01414 SAM-dependent methyltransferase YP_003124642.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR; K07124 YP_003124645.1 PFAM: pirin; KEGG: par:Psyc_1402 pirin family proteins YP_003124646.1 PFAM: nitroreductase; KEGG: oxidoreductase protein YP_003124648.1 PFAM: pirin; KEGG: bba:Bd0309 pirin-related protein YP_003124649.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll3247 dioxygenase YP_003124650.1 KEGG: aci:ACIAD3581 hypothetical protein YP_003124651.1 PFAM: phospholipase/carboxylesterase; KEGG: abm:ABSDF1529 carboxylesterase YP_003124652.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003124654.1 PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_15630 hypothetical protein YP_003124655.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: bja:bll2790 sugar transferase YP_003124656.1 KEGG: mxa:MXAN_0241 hypothetical protein YP_003124657.1 KEGG: sus:Acid_6666 outer membrane protein YP_003124658.1 KEGG: mes:Meso_0331 hypothetical protein YP_003124659.1 KEGG: ret:RHE_CH03280 hypothetical protein YP_003124660.1 PFAM: Luciferase-like monooxygenase; KEGG: mch:Mchl_1435 dehydrogenase protein YP_003124662.1 KEGG: dal:Dalk_1748 4'-phosphopantetheinyl transferase YP_003124663.1 KEGG: sat:SYN_01693 acyl carrier protein YP_003124664.1 PFAM: beta-ketoacyl synthase; KEGG: sat:SYN_01694 3-oxoacyl-[acyl-carrier- protein] synthase YP_003124665.1 PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sat:SYN_01695 3-hydroxymyristoyl/3- hydroxydecanoyl-(acyl carrier protein) dehydratase YP_003124666.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dal:Dalk_1753 oxidoreductase YP_003124667.1 PFAM: chalcone and stilbene synthase domain protein; FAE1/type III polyketide synthase-like protein; 3- Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3- Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: mxa:MXAN_6639 chalcone/stilbene synthase family protein YP_003124668.1 PFAM: methyltransferase type 12; KEGG: gbm:Gbem_1026 methyltransferase type 11 YP_003124669.1 PFAM: FAD dependent oxidoreductase; monooxygenase FAD-binding; tryptophan halogenase; KEGG: scl:sce2184 electron transfer oxidoreductase YP_003124670.1 PFAM: protein of unknown function UPF0187; KEGG: bba:Bd2002 hypothetical protein YP_003124671.1 PFAM: manganese containing catalase; KEGG: mfa:Mfla_1436 catalase YP_003124672.1 KEGG: hypothetical protein YP_003124673.1 PFAM: carbamoyltransferase; KEGG: reu:Reut_B4385 carbamoyltransferase YP_003124674.1 PFAM: glycosyl transferase family 2; KEGG: bac:BamMC406_6397 glycosyl transferase family protein YP_003124675.1 PFAM: glycosyl transferase family 9; KEGG: bmj:BMULJ_06053 ADP-heptose:LPS heptosyltransferase YP_003124676.1 PFAM: glycosyl transferase family 9; KEGG: nmu:Nmul_A1791 glycosyl transferase family protein YP_003124677.1 TIGRFAM: cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: nmu:Nmul_A1792 bifunctional ADP-heptose synthase YP_003124678.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; HAD- superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; polynucleotide kinase 3 phosphatase central region; KEGG: nmu:Nmul_A1793 HAD family hydrolase YP_003124679.1 PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A1795 phosphoheptose isomerase YP_003124680.1 KEGG: nmu:Nmul_A1782 glycosyltransferase YP_003124681.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: scl:sce0475 alcohol dehydrogenase YP_003124682.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: mxa:MXAN_1554 iron-sulfur cluster-binding protein, Rieske family YP_003124683.1 PFAM: CinA domain protein; KEGG: uncharacterized protein (competence- and mitomycin-induced) YP_003124685.1 KEGG: hypothetical protein YP_003124687.1 PFAM: major facilitator superfamily MFS_1; KEGG: pzu:PHZ_c2267 permease of the major facilitator superfamily YP_003124688.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mag:amb3439 response regulator YP_003124689.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: gur:Gura_3107 4'-phosphopantetheinyl transferase YP_003124690.1 KEGG: sus:Acid_1898 hypothetical protein YP_003124691.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: cps:CPS_1819 LytTr DNA-binding response regulator YP_003124692.1 PFAM: ATP-binding region ATPase domain protein; hypothetical protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: hypothetical protein YP_003124694.1 PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: dde:Dde_1659 heat shock protein DnaJ-like YP_003124695.1 KEGG: nis:NIS_0956 MerR family transcriptional regulator YP_003124697.1 KEGG: cak:Caul_1425 NHL repeat-containing protein YP_003124699.1 PFAM: lipolytic protein G-D-S-L family; KEGG: xac:XAC0836 hypothetical protein YP_003124700.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: hch:HCH_00425 alkylated DNA repair protein YP_003124701.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A2001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003124702.1 KEGG: sfu:Sfum_1534 hypothetical protein YP_003124703.1 PFAM: glycoside hydrolase family 37; KEGG: cja:CJA_0284 trehalase, , tre37A YP_003124705.1 PFAM: HEAT domain containing protein; KEGG: cps:CPS_3967 hypothetical protein YP_003124706.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: pol:Bpro_0083 protein of unknown function DUF899, thioredoxin-like YP_003124707.1 KEGG: sus:Acid_3364 hypothetical protein YP_003124712.1 KEGG: cak:Caul_4606 glucose-methanol-choline oxidoreductase YP_003124713.1 KEGG: smt:Smal_1043 twin-arginine translocation pathway signal YP_003124714.1 PFAM: carboxylesterase type B; KEGG: sus:Acid_6531 carboxylesterase, type B YP_003124716.1 PFAM: NmrA family protein; KEGG: aav:Aave_3935 NmrA family protein YP_003124717.1 PFAM: Secreted repeat of unknown function; KEGG: sat:SYN_00648 exported lipoprotein YP_003124718.1 KEGG: scl:sce0551 NHL repeat-containing protein YP_003124719.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppr:PBPRA2340 transport protein YP_003124720.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: nme:NMB0390 maltose phosphorylase YP_003124721.1 TIGRFAM: beta-phosphoglucomutase; beta- phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: pmr:PMI0289 beta-phosphoglucomutase YP_003124722.1 PFAM: alpha amylase catalytic region; Cyclomaltodextrinase; SMART: alpha amylase catalytic sub domain; KEGG: cja:CJA_0735 alpha-amylase, , amy13E YP_003124723.1 KEGG: cja:CJA_0006 alpha-amylase, , amy13G YP_003124724.1 PFAM: RagB/SusD domain protein YP_003124725.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124726.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator YP_003124727.1 KEGG: predicted protein; TIGRFAM: conserved repeat domain protein; PFAM: coagulation factor 5/8 type domain protein; Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4 YP_003124728.1 PFAM: regulatory protein TetR; KEGG: scl:sce6781 TetR family transcriptional regulator YP_003124729.1 PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator YP_003124732.1 KEGG: bcj:BCAM1414 hypothetical protein YP_003124733.1 PFAM: cytochrome C class I; KEGG: oan:Oant_1675 hypothetical protein YP_003124734.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: cvi:CV_0130 Xaa-Pro aminopeptidase YP_003124735.1 KEGG: protozoan/cyanobacterial globin family protein ; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) YP_003124737.1 KEGG: nwi:Nwi_0564 hypothetical protein YP_003124738.1 KEGG: neu:NE1680 hypothetical protein YP_003124739.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bxe:Bxe_A0003 MarR family transcriptional regulator YP_003124740.1 PFAM: beta-lactamase; KEGG: hch:HCH_03630 beta-lactamase class C and other penicillin binding protein YP_003124741.1 KEGG: gur:Gura_1730 multi-sensor signal transduction histidine kinase YP_003124742.1 PFAM: glycoside hydrolase family 16; KEGG: mxa:MXAN_6550 glycosyl hydrolase, family 15 YP_003124743.1 PFAM: two component regulator three Y domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pat:Patl_1836 two component AraC family transcriptional regulator YP_003124744.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: lpc:LPC_1001 RNA polymerase sigma E factor RpoE YP_003124745.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor YP_003124746.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124747.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003124748.1 KEGG: sus:Acid_7167 hypothetical protein YP_003124749.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 16; two component regulator three Y domain protein; KEGG: xcb:XC_3054 endo-1,3-beta-glucanase precursor YP_003124750.1 PFAM: carbohydrate-binding protein; Immunoglobulin I-set domain protein; Immunoglobulin domain protein; SMART: cellulose binding type IV; Immunoglobulin subtype; KEGG: hypothetical protein YP_003124751.1 KEGG: hypothetical protein YP_003124752.1 KEGG: rle:RL0430 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003124753.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator YP_003124754.1 KEGG: mmr:Mmar10_1735 hypothetical protein YP_003124755.1 PFAM: alpha/beta hydrolase; KEGG: bcb:BCB4264_A2370 proline iminopeptidase YP_003124759.1 KEGG: pfl:PFL_3332 hypothetical protein YP_003124761.1 KEGG: aav:Aave_3480 hypothetical protein YP_003124762.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bph:Bphy_6999 short-chain dehydrogenase/reductase SDR YP_003124763.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_4477 short-chain dehydrogenase/reductase SDR YP_003124764.1 PFAM: helix-turn-helix HxlR type; KEGG: bce:BC5059 MarR family transcriptional regulator YP_003124766.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003124768.1 PFAM: peptidase M56 BlaR1; KEGG: cak:Caul_3733 peptidase M56 BlaR1 YP_003124769.1 PFAM: Penicillinase repressor; KEGG: aba:Acid345_3296 transcriptional repressor, CopY family YP_003124770.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003124771.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_3917 TonB-dependent siderophore receptor YP_003124772.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: rpi:Rpic_3441 ethyl tert-butyl ether degradation EthD YP_003124775.1 KEGG: sus:Acid_7167 hypothetical protein YP_003124776.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein YP_003124780.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124781.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor YP_003124782.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bsu:BSU09520 RNA polymerase sigma factor SigM YP_003124783.1 PFAM: glycoside hydrolase family 39; KEGG: sus:Acid_3646 glycoside hydrolase family protein YP_003124784.1 KEGG: lactoylglutathione lyase protein YP_003124785.1 KEGG: vpa:VPA0062 ribosomal large chain pseudouridine synthase A YP_003124786.1 KEGG: sml:Smlt1345 hypothetical protein YP_003124787.1 KEGG: sml:Smlt1346 transmembrane protein YP_003124788.1 KEGG: pha:PSHAa0111 hypothetical protein YP_003124789.1 PFAM: cupin; KEGG: gdi:GDI2193 hypothetical protein YP_003124790.1 PFAM: aldo/keto reductase; KEGG: oxidoreductase protein YP_003124791.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: lch:Lcho_1402 two component LuxR family transcriptional regulator YP_003124792.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: cvi:CV_1270 dipeptidyl aminopeptidase YP_003124794.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein YP_003124795.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_1132 signal transduction histidine kinase, LytS YP_003124797.1 PFAM: RDD domain containing protein; KEGG: pst:PSPTO_4317 hypothetical protein YP_003124799.1 KEGG: pne:Pnec_0316 hypothetical protein YP_003124800.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bav:BAV2092 cold shock-like protein YP_003124801.1 PFAM: xylose isomerase; KEGG: amc:MADE_00428 twin-arginine translocation pathway signal YP_003124802.1 KEGG: mmr:Mmar10_0168 hypothetical protein YP_003124803.1 PFAM: PhnA protein; SMART: PhnA protein; KEGG: sde:Sde_0107 PhnA protein YP_003124804.1 KEGG: mxa:MXAN_1626 hypothetical protein YP_003124805.1 KEGG: efe:EFER_3469 lyase containing heat- repeat YP_003124806.1 PFAM: Ppx/GppA phosphatase; KEGG: hypothetical protein YP_003124807.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mlo:mlr2503 hypothetical protein YP_003124811.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_0374 secretion protein HlyD YP_003124812.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1 YP_003124813.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_0372 RND efflux system, outer membrane lipoprotein, NodT YP_003124814.1 PFAM: Penicillinase repressor; KEGG: mxa:MXAN_0190 hypothetical protein YP_003124817.1 KEGG: xac:XAC0731 hypothetical protein YP_003124818.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: bja:blr7814 L-proline 4-hydroxylase YP_003124819.1 KEGG: mno:Mnod_3023 polysaccharide deacetylase YP_003124820.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase YP_003124821.1 TIGRFAM: amino acid adenylation protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: pfo:Pfl01_1845 peptide synthase YP_003124822.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase YP_003124823.1 TIGRFAM: amino acid adenylation protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: pfo:Pfl01_1845 peptide synthase YP_003124824.1 KEGG: rso:RS03728 hypothetical protein YP_003124825.1 PFAM: thioesterase; KEGG: bcz:BCZK1713 thioesterase YP_003124826.1 PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: hch:HCH_02804 ABC-type siderophore export system, fused ATPase and permease components YP_003124827.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: bcb:BCB4264_A2463 bacitracin synthetase 1 YP_003124828.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: hch:HCH_00419 response regulator YP_003124830.1 PFAM: NGN domain protein; KEGG: dal:Dalk_0423 NusG antitermination factor YP_003124831.1 PFAM: peptidase M56 BlaR1; peptidase M48 Ste24p; KEGG: sus:Acid_0899 peptidase M56, BlaR1 YP_003124832.1 PFAM: TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor YP_003124833.1 KEGG: bcr:BCAH187_A4960 hypothetical protein YP_003124834.1 PFAM: RagB/SusD domain protein YP_003124835.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124839.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: afw:Anae109_3662 activator of HSP90 ATPase 1 family protein YP_003124840.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pat:Patl_2142 AraC family transcriptional regulator YP_003124841.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: vvu:VV2_1643 alkylated DNA repair protein YP_003124842.1 KEGG: sus:Acid_6666 outer membrane protein YP_003124843.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nar:Saro_3776 short-chain dehydrogenase/reductase SDR YP_003124845.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: similar to sorbitol dehydrogenase; K00008 L- iditol 2-dehydrogenase YP_003124846.1 PFAM: helix-turn-helix HxlR type; KEGG: ppr:PBPRB1657 transcriptional regulator YP_003124847.1 KEGG: bha:BH2855 hypothetical protein YP_003124848.1 PFAM: acyltransferase 3; KEGG: acyltransferase family protein YP_003124849.1 PFAM: alpha-L-arabinofuranosidase; KEGG: sus:Acid_3644 alpha-N-arabinofuranosidase YP_003124850.1 PFAM: alpha/beta hydrolase; KEGG: bxe:Bxe_B0550 alpha/beta family hydrolase YP_003124851.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: plu:plu1526 hypothetical protein YP_003124853.1 KEGG: mrd:Mrad2831_6398 hypothetical protein YP_003124854.1 KEGG: sil:SPO0571 PKD domain-containing protein YP_003124855.1 KEGG: similar to C6orf205 protein YP_003124857.1 PFAM: peptidase M48 Ste24p; KEGG: peptidase M48 Ste24p YP_003124858.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: azo:azo3559 hypothetical protein YP_003124859.1 PFAM: alpha/beta hydrolase; KEGG: efe:EFER_2276 hydrolase or acyltransferase YP_003124860.1 PFAM: metallophosphoesterase; KEGG: bra:BRADO2137 phosphatase YP_003124861.1 PFAM: NUDIX hydrolase; KEGG: vsp:VS_1604 hypothetical protein YP_003124862.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein YP_003124863.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_7002 histidine kinase internal region YP_003124864.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_1686 ABC transporter, ATP-binding protein YP_003124865.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: rce:RC1_1687 hypothetical protein YP_003124866.1 TIGRFAM: conserved repeat domain protein; KEGG: pfl:PFL_3520 outer membrane autotransporter YP_003124868.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: hypothetical protein YP_003124869.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gbm:Gbem_2559 AAA ATPase central domain protein YP_003124870.1 KEGG: sde:Sde_1050 hypothetical protein YP_003124871.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: lip:LIA029 chromosome-partitioning ATPase YP_003124872.1 KEGG: hypothetical protein YP_003124873.1 KEGG: gbm:Gbem_2557 hypothetical protein YP_003124874.1 KEGG: gbm:Gbem_2556 hypothetical protein YP_003124875.1 KEGG: gbm:Gbem_2555 hypothetical protein YP_003124876.1 KEGG: dar:Daro_3605 hypothetical protein YP_003124877.1 KEGG: sde:Sde_1046 response regulator receiver/GGDEF/PAS/PAC domain-containing protein YP_003124878.1 PFAM: carbohydrate-binding protein; KEGG: bba:Bd0705 cell wall surface anchor family protein YP_003124879.1 KEGG: gbm:Gbem_2553 hypothetical protein YP_003124880.1 PFAM: GPW/gp25 family protein; KEGG: cja:CJA_3677 gpW / GP25 family protein YP_003124881.1 PFAM: PAAR repeat-containing protein; KEGG: cja:CJA_3676 PaaR motif family YP_003124882.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: gbm:Gbem_2550 rhs element Vgr protein YP_003124883.1 KEGG: gbm:Gbem_2549 hypothetical protein YP_003124884.1 KEGG: gbm:Gbem_2548 hypothetical protein YP_003124885.1 TIGRFAM: conserved hypothetical protein; KEGG: gbm:Gbem_2547 conserved hypothetical phage tail protein YP_003124886.1 TIGRFAM: conserved hypothetical protein; KEGG: dar:Daro_3613 phage tail region protein YP_003124887.1 KEGG: hpp:HPP12_0534 cag pathogenicity island protein Y VirB10-like protein YP_003124888.1 KEGG: vfi:VF_1138 methyl-accepting chemotaxis protein, TcpI-related YP_003124889.1 PFAM: tail sheath protein; KEGG: gbm:Gbem_2545 hypothetical protein YP_003124891.1 KEGG: gbm:Gbem_2544 hypothetical protein YP_003124892.1 PFAM: glycoside hydrolase, family 20, catalytic core; beta-N-acetylhexosaminidase-like; KEGG: sde:Sde_3037 glycosyl hydrolase YP_003124894.1 KEGG: scl:sce3386 protein kinase YP_003124895.1 PFAM: beta-lactamase domain protein; KEGG: ppu:PP_1952 metallo-beta-lactamase family protein YP_003124896.1 PFAM: helix-turn-helix HxlR type; KEGG: dvl:Dvul_0808 HxlR family transcriptional regulator YP_003124898.1 KEGG: bph:Bphy_6890 hypothetical protein YP_003124899.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: gme:Gmet_3362 peptidase S1C, Do YP_003124900.1 KEGG: bhe:BH15200 hypothetical protein YP_003124902.1 PFAM: protein of unknown function DUF417; KEGG: mxa:MXAN_5244 hypothetical protein YP_003124903.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family YP_003124904.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein YP_003124906.1 TIGRFAM: outer membrane adhesin like protein; KEGG: cja:CJA_1396 hemolysin YP_003124907.1 KEGG: sml:Smlt2170 calcineurin phosphoesterase YP_003124909.1 KEGG: hypothetical protein YP_003124910.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124911.1 PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor YP_003124912.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: ppf:Pput_3545 anti-FecI sigma factor, FecR YP_003124913.1 PFAM: hypothetical protein; KEGG: bba:Bd3413 ABC transporter substrate binding protein YP_003124914.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component YP_003124915.1 PFAM: protein of unknown function DUF140; KEGG: rpr:RP096 hypothetical protein YP_003124917.1 PFAM: FAD linked oxidase domain protein; KEGG: hypothetical protein YP_003124918.1 KEGG: vsp:VS_II0042 Bor protein precursor of bacteriophage YP_003124920.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: vha:VIBHAR_01744 hypothetical protein YP_003124921.1 PFAM: KR domain protein; beta-ketoacyl synthase; thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: pfl:PFL_2994 nonribosomal peptide synthase YP_003124922.1 PFAM: beta-ketoacyl synthase; methyltransferase type 11; KR domain protein; methyltransferase type 12; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17200 polyketide synthase YP_003124923.1 PFAM: KR domain protein; beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: gur:Gura_3097 beta-ketoacyl synthase YP_003124924.1 PFAM: beta-ketoacyl synthase; KR domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17190 polyketide synthase of type I YP_003124925.1 involved in polyketide production YP_003124926.1 involved in polyketide synthesis YP_003124927.1 PFAM: hydroxymethylglutaryl-coenzyme A synthase domain protein; hydroxymethylglutaryl-coenzyme A synthase domain; KEGG: bsu:BSU17150 involved in polyketide synthesis YP_003124928.1 PFAM: beta-ketoacyl synthase; methyltransferase type 11; methyltransferase type 12; alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; KR domain protein; alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3932 polyketide synthase YP_003124929.1 PFAM: KR domain protein; AMP-dependent synthetase and ligase; beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17190 polyketide synthase of type I YP_003124930.1 PFAM: protein of unknown function DUF98; KEGG: hch:HCH_06163 4-hydroxybenzoate synthetase (chorismate lyase) YP_003124932.1 PFAM: cytochrome P450; KEGG: bca:BCE_2696 cytochrome P450 YP_003124933.1 involved in polyketide production YP_003124934.1 KEGG: bmn:BMA10247_A1115 acyl carrier protein YP_003124936.1 PFAM: acyl transferase; KEGG: gur:Gura_3106 acyl transferase domain- containing protein YP_003124937.1 TIGRFAM: PfaD family protein; malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: gur:Gura_3105 malonyl CoA-acyl carrier protein transacylase YP_003124938.1 PFAM: NGN domain protein; SMART: NGN domain protein; KEGG: aba:Acid345_3498 transcription antitermination protein NusG YP_003124939.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: bja:bll0718 transporter YP_003124941.1 KEGG: xcb:XC_0515 hypothetical protein YP_003124942.1 PFAM: fatty acid hydroxylase; KEGG: eli:ELI_14060 sterol desaturase family protein YP_003124945.1 PFAM: sulfatase; KEGG: cti:RALTA_B0519 arylsulfatase precursor YP_003124946.1 PFAM: RagB/SusD domain protein YP_003124947.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124948.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003124949.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_0346 transcriptional regulator, AraC family YP_003124950.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pca:Pcar_2625 Bcr/CflA subfamily drug resistance transporter YP_003124951.1 KEGG: hypothetical protein YP_003124953.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_3361 ABC transporter ATP- binding protein YP_003124954.1 KEGG: xca:xccb100_3903 ABC transporter permease YP_003124955.1 KEGG: dac:Daci_4459 hypothetical protein YP_003124956.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ppg:PputGB1_0701 TonB-dependent siderophore receptor YP_003124958.1 PFAM: lanthionine synthetase C family protein; KEGG: mxa:MXAN_2857 lantibiotic modification protein YP_003124959.1 KEGG: bce:BC5083 lantibiotic biosynthesis protein YP_003124960.1 PFAM: lantibiotic dehydratase; KEGG: bce:BC5084 lanthionine biosynthesis protein YP_003124961.1 PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eba:ebA1666 fusion of ABC transporter-type transmembrane and ATP binding protein YP_003124962.1 PFAM: outer membrane efflux protein; KEGG: gme:Gmet_3465 outer membrane efflux protein YP_003124963.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: glo:Glov_1631 drug resistance transporter, EmrB/QacA subfamily YP_003124964.1 PFAM: secretion protein HlyD family protein; KEGG: vfi:VF_0878 EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component YP_003124965.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: transcriptional regulator, MarR family YP_003124967.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region YP_003124968.1 PFAM: histidine kinase internal region; KEGG: aba:Acid345_3292 periplasmic sensor signal transduction histidine kinase YP_003124969.1 PFAM: lipocalin; KEGG: hypothetical protein YP_003124970.1 PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: tcx:Tcr_2057 fructosamine kinase YP_003124971.1 PFAM: glucose sorbosone dehydrogenase; KEGG: pzu:PHZ_c0611 glucose dehydrogenase- B, periplasmic protein YP_003124972.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sus:Acid_5720 ECF subfamily RNA polymerase sigma-24 factor YP_003124973.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family YP_003124974.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003124976.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sfr:Sfri_1234 redoxin domain protein YP_003124977.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase YP_003124978.1 PFAM: lipase class 3; KEGG: plu:plu1516 hypothetical protein YP_003124979.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_3381 hypothetical protein YP_003124980.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_0565 AraC family transcriptional regulator YP_003124982.1 PFAM: NUDIX hydrolase; KEGG: bca:BCE_2116 MutT/NUDIX family protein YP_003124983.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: esa:ESA_02953 hypothetical protein YP_003124984.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_3180 helix-turn-helix domain- containing protein YP_003124985.1 KEGG: scl:sce6628 secreted protein YP_003124986.1 KEGG: mes:Meso_0331 hypothetical protein YP_003124987.1 TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH- dependent FMN reductase; KEGG: bha:BH1010 hypothetical protein YP_003124988.1 KEGG: eli:ELI_00245 hypothetical protein YP_003124991.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_0374 secretion protein HlyD YP_003124992.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1 YP_003124993.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_0372 RND efflux system, outer membrane lipoprotein, NodT YP_003124994.1 KEGG: cps:CPS_2775 hypothetical protein YP_003124995.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: slo:Shew_2207 integral membrane sensor signal transduction histidine kinase YP_003124997.1 PFAM: hypothetical protein; leucine-rich repeat protein; SMART: hypothetical protein; leucine-rich repeat- containing protein typical subtype; KEGG: GI22874 gene product from transcript GI22874- RA YP_003125000.1 TIGRFAM: outer membrane adhesin like protein; conserved repeat domain protein; SMART: cadherin; KEGG: cja:CJA_1396 hemolysin YP_003125001.1 PFAM: protein of unknown function DUF159; KEGG: bsu:BSU18660 hypothetical protein YP_003125004.1 KEGG: pde:Pden_4731 methylamine utilisation MauE YP_003125007.1 KEGG: rlt:Rleg2_5325 hypothetical protein YP_003125009.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: catalase (peroxidase I); K03782 catalase/peroxidase YP_003125010.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1629 AraC family transcription regulator YP_003125011.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll2196 short chain oxidoreductase YP_003125012.1 PFAM: cupin; KEGG: bja:bll4011 hypothetical protein YP_003125013.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_1132 signal transduction histidine kinase, LytS YP_003125014.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein YP_003125016.1 PFAM: OmpW family protein; KEGG: mmr:Mmar10_0595 OmpW family protein YP_003125017.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmr:PMI1962 AraC-family transcriptional regulator YP_003125018.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase YP_003125019.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_2607 transcriptional regulator, AraC family YP_003125020.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein YP_003125021.1 KEGG: afw:Anae109_3225 glycoside hydrolase family protein YP_003125024.1 PFAM: glycoside hydrolase family 26; KEGG: hypothetical protein YP_003125026.1 PFAM: RagB/SusD domain protein YP_003125027.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125028.1 PFAM: glycosidase PH1107-related; KEGG: cja:CJA_0242 hypothetical protein YP_003125029.1 TIGRFAM: sugar (glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_2284 cation symporter YP_003125030.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: cja:CJA_0243 Unk2 YP_003125031.1 KEGG: ilo:IL0782 hypothetical protein YP_003125032.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003125033.1 PFAM: alpha/beta hydrolase; KEGG: cti:RALTA_B0404 2-hydroxy-6-ketonone-2,4- dienedioic acid hydrolase YP_003125034.1 PFAM: endoribonuclease L-PSP; KEGG: mch:Mchl_5535 endoribonuclease L-PSP YP_003125035.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003125036.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_0037 short-chain dehydrogenase/reductase SDR YP_003125037.1 PFAM: TonB-dependent receptor; KEGG: ccr:CC_0815 TonB-dependent receptor YP_003125038.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dar:Daro_0623 CBS YP_003125039.1 PFAM: glycosyl hydrolase family 88; KEGG: see:SNSL254_A2071 glycosyl hydrolase, family 88 YP_003125040.1 KEGG: swp:swp_2453 alpha-glucosidase YP_003125041.1 PFAM: glycoside hydrolase family 35; KEGG: bph:Bphy_6542 beta-galactosidase YP_003125044.1 KEGG: hypothetical protein YP_003125045.1 KEGG: pzu:PHZ_c2153 choline dehydrogenase YP_003125046.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: smt:Smal_1042 glucose-methanol-choline oxidoreductase YP_003125047.1 KEGG: amc:MADE_00435 twin-arginine translocation pathway signal YP_003125048.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sde:Sde_1211 2-dehydro-3-deoxyphosphooctonate aldolase YP_003125050.1 KEGG: sus:Acid_4167 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003125051.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003125052.1 PFAM: regulatory protein TetR; KEGG: pmu:PM1135 hypothetical protein YP_003125053.1 PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_1438 monooxygenase, FAD-binding YP_003125054.1 PFAM: fatty acid desaturase; KEGG: similar to sphingolipid delta 4 desaturase/C- 4 hydroxylase protein DES2; K04712 sphingolipid delta-4 desaturase YP_003125055.1 PFAM: aldo/keto reductase; KEGG: rle:pRL120760 aldo-keto reductase protein YP_003125057.1 PFAM: homogentisate 12-dioxygenase; KEGG: bcy:Bcer98_0230 homogentisate 12-dioxygenase YP_003125059.1 KEGG: AK-HSDH/AK-HSDH_I; AK-HSDH/AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase; K00003 homoserine dehydrogenase; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; aspartate/glutamate/uridylate kinase YP_003125060.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate YP_003125061.1 KEGG: sfv:SFV_0003 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit YP_003125062.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: TPR Domain containing protein YP_003125063.1 KEGG: glo:Glov_3613 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003125064.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0829 response regulator receiver protein YP_003125065.1 KEGG: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003125066.1 PFAM: PhoH family protein; KEGG: bcy:Bcer98_3031 PhoH family protein YP_003125068.1 KEGG: noc:Noc_2135 hypothetical protein YP_003125069.1 PFAM: inorganic pyrophosphatase; KEGG: inorganic pyrophosphatase family protein; K01507 inorganic pyrophosphatase YP_003125070.1 PFAM: NLP/P60 protein; KEGG: aba:Acid345_4057 NLP/P60 YP_003125071.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: hypothetical protein LOC446951 YP_003125072.1 KEGG: hypothetical protein YP_003125073.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: afw:Anae109_2126 ECF subfamily RNA polymerase sigma-24 factor YP_003125074.1 KEGG: bha:BH3217 hypothetical protein YP_003125075.1 KEGG: sde:Sde_0178 hypothetical protein YP_003125076.1 KEGG: gbm:Gbem_0005 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_003125077.1 PFAM: saccharopine dehydrogenase; KEGG: similar to R02D3.1 YP_003125078.1 PFAM: silent information regulator protein Sir2; KEGG: dps:DP3103 hypothetical protein YP_003125079.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: sus:Acid_4842 phosphoesterase, PA-phosphatase related YP_003125080.1 KEGG: bha:BH1584 hypothetical protein YP_003125081.1 PFAM: protein of unknown function DUF55; KEGG: rce:RC1_2357 hypothetical protein YP_003125082.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: sus:Acid_5763 hypothetical protein YP_003125083.1 KEGG: bha:BH1557 riboflavin synthase subunit beta; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003125084.1 SMART: hypothetical protein; KEGG: GK17986 gene product from transcript GK17986- RA YP_003125085.1 KEGG: wpi:WPa_0086 pyruvate dehydrogenase complex, E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003125086.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: bcy:Bcer98_0004 recombination protein F YP_003125087.1 PFAM: protein of unknown function DUF721; KEGG: ppd:Ppro_1102 hypothetical protein YP_003125088.1 KEGG: pfo:Pfl01_1439 hypothetical protein YP_003125092.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ajs:Ajs_2415 ECF subfamily RNA polymerase sigma-24 factor YP_003125093.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1184 dipeptide ABC transporter, permease protein YP_003125094.1 PFAM: DoxX family protein; KEGG: DoxX family protein YP_003125095.1 KEGG: vvy:VV2714 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003125096.1 PFAM: protein of unknown function DUF147; KEGG: pca:Pcar_0999 hypothetical protein YP_003125097.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dps:DP1645 peptidyl-prolyl cis-trans isomerase YP_003125098.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: phosphoesterase RecJ domain protein; K06881 YP_003125099.1 KEGG: GK19226 gene product from transcript GK19226- RA; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003125100.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bcy:Bcer98_2788 site-specific tyrosine recombinase XerD YP_003125101.1 KEGG: bcn:Bcen_3596 phosphatidylinositol-specific phospholipase C, X region; PFAM: phosphatidylinositol-specific phospholipase C X region; SMART: phosphatidylinositol-specific phospholipase C X region YP_003125102.1 KEGG: pin:Ping_3080 hypothetical protein YP_003125105.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: rfr:Rfer_0893 response regulator receiver sensor signal transduction histidine kinase YP_003125106.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bha:BH3628 two-component response regulator involved in degradative enzyme YP_003125107.1 KEGG: mxa:MXAN_6196 hypothetical protein YP_003125108.1 PFAM: Na+/solute symporter; KEGG: mxa:MXAN_6190 transporter, solute:sodium symporter (SSS) family YP_003125111.1 PFAM: LmbE family protein; KEGG: mxa:MXAN_6192 hypothetical protein YP_003125112.1 PFAM: protein of unknown function DUF486; KEGG: dvm:DvMF_1476 protein of unknown function DUF486 YP_003125114.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: abo:ABO_1639 RNA polymerase sigma factor RpoE YP_003125115.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family YP_003125116.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125117.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_003125118.1 PFAM: phosphoribosyltransferase; KEGG: dol:Dole_3195 uracil phosphoribosyltransferase YP_003125119.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: Os06g0196300; hypothetical protein; K03564 peroxiredoxin Q/BCP YP_003125120.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003125121.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: dps:DP2491 delta-1-pyrroline-5-carboxylate dehydrogenase YP_003125123.1 KEGG: hypothetical protein YP_003125124.1 PFAM: phosphoglucose isomerase (PGI); KEGG: vvu:VV1_1396 glucose-6-phosphate isomerase YP_003125125.1 SMART: PUR-alpha/beta/gamma DNA/RNA-binding YP_003125126.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aba:Acid345_1514 ABC transporter, ATPase subunit YP_003125127.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_003125128.1 KEGG: dar:Daro_1907 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: exonuclease; Excinuclease ABC C subunit domain protein YP_003125129.1 KEGG: gbm:Gbem_0816 outer membrane protein YP_003125130.1 PFAM: regulatory protein TetR; KEGG: vfm:VFMJ11_1158 transcriptional regulator, TetR family YP_003125131.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pol:Bpro_5550 NADH:flavin oxidoreductase/NADH oxidase YP_003125132.1 PFAM: glucuronate isomerase; KEGG: cja:CJA_2772 glucuronate isomerase YP_003125133.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; KEGG: csa:Csal_1735 altronate dehydratase YP_003125134.1 catalyzes the formation of D-tagaturonate from D-altronate YP_003125135.1 PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein YP_003125136.1 PFAM: lipolytic protein G-D-S-L family; glycoside hydrolase family 28; KEGG: sus:Acid_1250 glycoside hydrolase family protein YP_003125137.1 PFAM: RagB/SusD domain protein YP_003125138.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125140.1 KEGG: GH12867 gene product from transcript GH12867- RA YP_003125141.1 PFAM: glycoside hydrolase family 43; KEGG: cja:CJA_3601 beta-xylosidase/alpha-L- arabinfuranosidase, , gly43I YP_003125142.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator YP_003125143.1 KEGG: gsu:GSU1629 glyceraldehyde 3-phosphate dehydrogenase 1; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_003125144.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_3529 AraC family transcriptional regulator YP_003125145.1 KEGG: bvi:Bcep1808_3951 AraC family transcriptional regulator YP_003125146.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bca:BCE_2770 oxidoreductase, zinc-binding YP_003125147.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003125148.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: asa:ASA_1609 short-chain dehydrogenase/reductase SDR YP_003125149.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein YP_003125150.1 PFAM: RagB/SusD domain protein YP_003125151.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125152.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family YP_003125153.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: rpt:Rpal_0706 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003125154.1 KEGG: sun:SUN_1075 hypothetical protein YP_003125155.1 PFAM: beta-lactamase; KEGG: mmr:Mmar10_2357 beta-lactamase YP_003125156.1 KEGG: bmv:BMASAVP1_A1030 hypothetical protein YP_003125157.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: sus:Acid_2560 peptidase M1, membrane alanine aminopeptidase YP_003125158.1 PFAM: protein of unknown function UPF0047; KEGG: cja:CJA_1686 conserved hypothetical protein TIGR00149 YP_003125159.1 PFAM: UspA domain protein YP_003125160.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; KEGG: noc:Noc_1756 PAS sensor signal transduction histidine kinase YP_003125162.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125163.1 PFAM: metallophosphoesterase; KEGG: ret:RHE_PB00047 serine/threonine- specific protein phosphatase protein YP_003125164.1 KEGG: mes:Meso_2769 hypothetical protein YP_003125165.1 KEGG: sbm:Shew185_1552 hypothetical protein YP_003125166.1 KEGG: noc:Noc_2990 hypothetical protein YP_003125167.1 PFAM: LytTr DNA-binding region; KEGG: ccs:CCNA_00586 hypothetical response regulator receiver protein YP_003125168.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcz:pE33L466_0360 MarR family transcriptional regulator YP_003125169.1 KEGG: bce:BC2679 hypothetical protein YP_003125170.1 KEGG: aba:Acid345_3870 hypothetical protein YP_003125171.1 KEGG: bha:BH0842 hypothetical protein YP_003125172.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein YP_003125173.1 KEGG: jan:Jann_0598 hypothetical protein YP_003125174.1 KEGG: hypothetical protein YP_003125175.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rfr:Rfer_4108 3-demethylubiquinone-9 3- methyltransferase YP_003125176.1 KEGG: ccs:CCNA_00831 alpha-glucosidase; PFAM: glycoside hydrolase family 31; PA14 domain protein; SMART: PA14 domain protein YP_003125177.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125178.1 PFAM: RagB/SusD domain protein YP_003125181.1 KEGG: chitinase, PFAM: glycoside hydrolase family 19; carbohydrate- binding family V/XII; SMART: carbohydrate-binding protein YP_003125182.1 KEGG: xcb:XC_1120 xylanase YP_003125183.1 KEGG: afw:Anae109_2663 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003125184.1 PFAM: response regulator receiver; cyclic nucleotide-binding; regulatory protein Crp; SMART: response regulator receiver; cyclic nucleotide-binding; regulatory protein Crp; KEGG: lch:Lcho_2296 response regulator receiver sensor signal transduction histidine kinase YP_003125188.1 KEGG: hypothetical protein LOC100149782 YP_003125189.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein YP_003125190.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125191.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family YP_003125193.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mxa:MXAN_6735 sensor histidine kinase/response regulator YP_003125194.1 PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: ppw:PputW619_2106 multi-sensor hybrid histidine kinase YP_003125195.1 PFAM: secretory protein; KEGG: smt:Smal_3351 hypothetical protein YP_003125196.1 PFAM: protein of unknown function DUF195; KEGG: gur:Gura_0571 hypothetical protein YP_003125197.1 KEGG: hypothetical protein YP_003125198.1 PFAM: protein of unknown function DUF885; KEGG: hypothetical protein YP_003125199.1 PFAM: FAD dependent oxidoreductase; KEGG: spl:Spea_0813 FAD dependent oxidoreductase YP_003125200.1 PFAM: proline racemase; KEGG: bcs:BCAN_A1830 proline racemase YP_003125201.1 KEGG: rru:Rru_A2361 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold- 3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein YP_003125203.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003125204.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dps:DP2123 multidrug ABC transporter YP_003125205.1 PFAM: acriflavin resistance protein; KEGG: mca:MCA2131 AcrB/AcrD/AcrF family protein YP_003125206.1 PFAM: outer membrane efflux protein; KEGG: bte:BTH_II2104 RND efflux system outer membrane lipoprotein YP_003125207.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE0556 TonB-dependent receptor protein YP_003125208.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cja:CJA_0782 DNA-binding response regulator YP_003125209.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: sus:Acid_2499 hypothetical protein YP_003125210.1 PFAM: protein of unknown function DUF403; KEGG: aba:Acid345_3319 protein of unknown function DUF403 YP_003125211.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: aba:Acid345_3318 transglutaminase-like YP_003125212.1 PFAM: amino acid permease-associated region; KEGG: aba:Acid345_3285 amino acid transporter YP_003125213.1 PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_B3713 aldehyde dehydrogenase YP_003125214.1 PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B0873 dihydrodipicolinate synthase YP_003125215.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_01299 AraC-type DNA-binding domain- containing protein YP_003125216.1 PFAM: aldo/keto reductase; KEGG: esa:ESA_00850 hypothetical protein YP_003125217.1 PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: (2r)-phospho-3-sulfolactate synthase; K01767 YP_003125218.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sus:Acid_0781 hypothetical protein YP_003125219.1 PFAM: protein of unknown function DUF1470; KEGG: ank:AnaeK_3459 protein of unknown function DUF1470 YP_003125220.1 PFAM: aldose 1-epimerase; KEGG: bcr:BCAH187_A1765 LacX protein YP_003125221.1 KEGG: dol:Dole_2318 hypothetical protein YP_003125222.1 PFAM: beta-lactamase domain protein; rhodanese domain protein; SMART: rhodanese domain protein; KEGG: metallo-beta-lactamase superfamily protein YP_003125223.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0136 response regulator receiver protein YP_003125224.1 PFAM: histidine kinase internal region; KEGG: aba:Acid345_3488 periplasmic sensor signal transduction histidine kinase YP_003125225.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein YP_003125226.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor YP_003125228.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: swi:Swit_1629 stress responsive alpha-beta barrel domain-containing protein YP_003125229.1 PFAM: glycosyl transferase group 1; KEGG: bja:bll5144 glycosyl transferase YP_003125230.1 KEGG: dps:DP2453 glycosyltransferase YP_003125231.1 PFAM: glycosyl transferase group 1; KEGG: dps:DP2455 hypothetical protein YP_003125232.1 PFAM: glycosidase PH1107-related; KEGG: dps:DP2460 hypothetical protein YP_003125233.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: jan:Jann_2050 AraC family transcriptional regulator YP_003125234.1 PFAM: glycoside hydrolase family 47; KEGG: glycoside hydrolase family 47 protein; K10084 ER degradation enhancer, mannosidase alpha- like 1 YP_003125235.1 KEGG: swp:swp_1410 cytosolic protein YP_003125237.1 PFAM: hypothetical protein; KEGG: bpm:BURPS1710b_1663 hypothetical protein YP_003125240.1 PFAM: protein of unknown function DUF434; KEGG: sun:SUN_0694 hypothetical protein YP_003125242.1 PFAM: NmrA family protein; KEGG: bba:Bd3174 nucleoside-diphosphate- sugar epimerase YP_003125243.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003125244.1 TIGRFAM: lycopene cyclase domain protein YP_003125245.1 PFAM: fatty acid hydroxylase; KEGG: eli:ELI_03325 beta-carotene hydroxylase YP_003125246.1 PFAM: squalene/phytoene synthase; KEGG: cvi:CV_2978 geranylgeranyl-diphosphate geranylgeranyltransferase YP_003125247.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_0895 phytoene desaturase YP_003125248.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: mxa:MXAN_0904 B12 binding domain/transcriptional regulator, MerR family YP_003125249.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bba:Bd0305 quinone oxidoreductase YP_003125250.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rlt:Rleg2_1831 activator of HSP90 ATPase 1 family protein YP_003125251.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator YP_003125252.1 KEGG: bpt:Bpet3466 hypothetical protein YP_003125253.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bps:BPSS0919 hypothetical protein YP_003125254.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pap:PSPA7_4312 short chain dehydrogenase YP_003125255.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bxe:Bxe_B0546 epimerase/dehydratase YP_003125256.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003125257.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2651 alpha-1,2-mannosidase family protein YP_003125258.1 PFAM: protein of unknown function DUF179; KEGG: pmr:PMI0339 hypothetical protein YP_003125259.1 KEGG: aba:Acid345_1726 hypothetical protein YP_003125260.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_6279 AraC family transcriptional regulator YP_003125261.1 KEGG: bvi:Bcep1808_4925 hypothetical protein YP_003125262.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003125263.1 KEGG: ilo:IL0337 adenylosuccinate synthase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_003125265.1 KEGG: viral A-type inclusion protein; K02331 DNA polymerase phi subunit YP_003125266.1 KEGG: hypothetical protein YP_003125267.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rlt:Rleg2_1908 alpha amylase catalytic region YP_003125268.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function YP_003125269.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_B3939 GntR family transcriptional regulator YP_003125270.1 PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_0933 glycoside hydrolase, clan GH-D YP_003125271.1 KEGG: hypothetical protein YP_003125272.1 PFAM: RagB/SusD domain protein YP_003125273.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125274.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein YP_003125275.1 KEGG: scl:sce6646 hypothetical protein YP_003125277.1 KEGG: aba:Acid345_2425 hypothetical protein YP_003125278.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr4183 oxidoreductase YP_003125281.1 KEGG: pca:Pcar_2842 UDP-glucuronosyltransferase- like protein YP_003125282.1 PFAM: glycosyl transferase family 2; KEGG: bid:Bind_1618 glycosyl transferase family protein YP_003125283.1 KEGG: sfu:Sfum_1765 polysaccharide deacetylase YP_003125284.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mch:Mchl_3513 metal dependent phosphohydrolase YP_003125285.1 KEGG: psp:PSPPH_4306 hypothetical protein YP_003125287.1 PFAM: Ricin B lectin; alpha-L-rhamnosidase; SMART: Ricin B lectin; beta and gamma crystallin; KEGG: sus:Acid_3742 alpha-L-rhamnosidase YP_003125288.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003125289.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_6333 short-chain dehydrogenase/reductase SDR YP_003125290.1 PFAM: endoribonuclease L-PSP; KEGG: mxa:MXAN_0100 peptidase, M28D (aminopeptidase ES-62) subfamily YP_003125291.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A1376 methyl parathion hydrolase YP_003125292.1 PFAM: helix-turn-helix HxlR type; KEGG: pca:Pcar_1088 MarR family transcriptional regulator YP_003125293.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: net:Neut_1304 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_003125294.1 PFAM: YceI family protein; KEGG: scl:sce0162 hypothetical protein YP_003125295.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mca:MCA2738 hexulose-6-phosphate synthase/SIS domain-containing protein YP_003125296.1 TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: bsu:BSU03450 6-phospho-3-hexuloisomerase (phi) YP_003125297.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vsp:VS_II1368 transcriptional regulator, AraC family YP_003125298.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: mxa:MXAN_2791 protease B YP_003125299.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003125300.1 PFAM: fatty acid desaturase; KEGG: eca:ECA0115 fatty acid desaturase YP_003125301.1 PFAM: fatty acid desaturase; KEGG: cvi:CV_1644 linoleoyl-CoA desaturase YP_003125302.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: ppd:Ppro_3009 hypothetical protein YP_003125303.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: saz:Sama_3624 protease YP_003125304.1 PFAM: epoxide hydrolase domain protein; alpha/beta hydrolase; KEGG: rle:pRL90316 hydrolase YP_003125305.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE0549 TonB-dependent receptor protein YP_003125306.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: mfa:Mfla_0617 SufS subfamily cysteine desulfurase YP_003125307.1 KEGG: bid:Bind_1233 hypothetical protein YP_003125308.1 KEGG: sml:Smlt1824 hypothetical protein YP_003125309.1 PFAM: TonB-dependent receptor; Heavy metal transport/detoxification protein; KEGG: mfa:Mfla_1905 TonB-dependent receptor YP_003125311.1 PFAM: helix-turn-helix HxlR type; KEGG: rpa:RPA3222 MarR family transcriptional regulator YP_003125312.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0085 norsolorinic acid reductase YP_003125313.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH2083 transposase (18) YP_003125314.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: cco:CCC13826_1715 Na+/H+ antiporter YP_003125315.1 PFAM: monooxygenase FAD-binding; KEGG: hypothetical protein YP_003125316.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce1536 AraC family transcriptional regulator YP_003125317.1 PFAM: cupin; KEGG: msl:Msil_1146 cupin 2 conserved barrel domain protein YP_003125318.1 KEGG: msu:MS1396 hypothetical protein YP_003125319.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: cak:Caul_0434 alcohol dehydrogenase YP_003125320.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003125322.1 KEGG: bsu:BSU07690 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003125323.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bac:BamMC406_3582 short-chain dehydrogenase/reductase SDR YP_003125324.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003125325.1 PFAM: NLI interacting domain protein; SMART: NLI interacting domain protein; KEGG: hne:HNE_2798 phosphoprotein phosphatase YP_003125326.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dde:Dde_1611 AraC family transcriptional regulator YP_003125327.1 KEGG: ADY3; Ady3p YP_003125328.1 KEGG: hypothetical protein; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003125329.1 KEGG: dno:DNO_0078 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003125330.1 PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pcr:Pcryo_0938 hypothetical protein YP_003125331.1 PFAM: Hyaluronidase; KEGG: xcv:XCV4043 secreted protein YP_003125332.1 KEGG: sde:Sde_0054 adenylyl cyclase class- 3/4/guanylyl cyclase YP_003125333.1 KEGG: bsu:BSU18730 hypothetical protein YP_003125334.1 SMART: helix-turn-helix domain protein; KEGG: bcb:BCB4264_A2209 transcription regulator, Cro/CI family -related protein YP_003125335.1 KEGG: dac:Daci_4513 hypothetical protein YP_003125336.1 PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_A4924 hypothetical protein YP_003125337.1 KEGG: bbr:BB1232 hypothetical protein YP_003125339.1 KEGG: hypothetical protein YP_003125341.1 KEGG: reu:Reut_A0536 hypothetical protein YP_003125342.1 KEGG: gur:Gura_3576 hypothetical protein YP_003125345.1 KEGG: nar:Saro_3911 hypothetical protein YP_003125346.1 KEGG: ada; methylated-DNA-(protein)-cysteine S- methyltransferase protein; K00567 methylated-DNA-; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_003125349.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003125350.1 KEGG: hsm:HSM_1739 hypothetical protein YP_003125351.1 KEGG: sus:Acid_1798 hypothetical protein YP_003125352.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003125353.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL2941 short-chain dehydrogenase/oxidoreductase YP_003125354.1 KEGG: reh:H16_A1662 hypothetical protein YP_003125355.1 KEGG: mxa:MXAN_5269 S1D (lysyl endopeptidase) subfamily C-terminal domain protein YP_003125356.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: eli:ELI_12660 two-component response regulator YP_003125357.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: asa:ASA_1693 two-component system sensor histidine kinase YP_003125358.1 KEGG: ccs:CCNA_00298 hypothetical protein YP_003125359.1 PFAM: ABC transporter related; KEGG: acp:A2cp1_1559 ABC transporter related YP_003125361.1 PFAM: alpha-L-arabinofuranosidase; carbohydrate-binding CenC domain protein; KEGG: Os11g0131900; hypothetical protein YP_003125362.1 PFAM: glycoside hydrolase clan GH-D; KEGG: bha:BH1870 hypothetical protein YP_003125363.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003125364.1 KEGG: hypothetical protein YP_003125365.1 TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: pmr:PMI2505 transcriptional regulator YP_003125366.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: spe:Spro_1283 nicotinamide mononucleotide transporter PnuC YP_003125367.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: afr:AFE_3229 TonB-dependent receptor YP_003125368.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: hypothetical protein YP_003125369.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rlt:Rleg2_5176 GAF sensor signal transduction histidine kinase YP_003125370.1 PFAM: glycoside hydrolase family 9; KEGG: aba:Acid345_0426 glycoside hydrolase, family 9 YP_003125371.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003125372.1 PFAM: Domain of unknown function DUF1801; KEGG: mmr:Mmar10_2216 hypothetical protein YP_003125373.1 KEGG: afw:Anae109_3659 hypothetical protein YP_003125374.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein YP_003125376.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: bcr:BCAH187_A1759 conserved repeat domain protein YP_003125377.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; KEGG: tmz:Tmz1t_0474 two component transcriptional regulator, LuxR family YP_003125378.1 KEGG: DNA repair-related protein YP_003125380.1 PFAM: DoxX family protein; KEGG: aba:Acid345_3719 DoxX YP_003125382.1 SMART: helix-turn-helix domain protein; KEGG: bsu:BSU18740 hypothetical protein YP_003125383.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bba:Bd1451 MarR family transcriptional regulator YP_003125384.1 PFAM: saccharopine dehydrogenase; KEGG: pla:Plav_2027 saccharopine dehydrogenase YP_003125385.1 KEGG: pat:Patl_0575 hypothetical protein YP_003125386.1 KEGG: sde:Sde_1565 arginine decarboxylase YP_003125387.1 PFAM: ApbE family lipoprotein; KEGG: tgr:Tgr7_0552 ApbE family lipoprotein YP_003125388.1 KEGG: cps:CPS_2790 electron transfer protein YP_003125389.1 KEGG: xcv:XCV2800 alpha-glucosidase YP_003125390.1 KEGG: bpy:Bphyt_5447 hypothetical protein YP_003125391.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rpe:RPE_4865 alpha amylase, catalytic region YP_003125392.1 KEGG: eca:ECA3329 acetyltransferase YP_003125393.1 PFAM: UspA domain protein; KEGG: uspA; UspA-related nucleotide-binding protein YP_003125394.1 KEGG: aba:Acid345_3575 hypothetical protein YP_003125395.1 PFAM: methyltransferase type 12; methyltransferase type 11; Methionine biosynthesis MetW protein; KEGG: rpe:RPE_0811 methyltransferase type 11 YP_003125396.1 KEGG: aba:Acid345_2901 hypothetical protein YP_003125397.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: cja:CJA_2207 membrane-associated phospholipid phosphatase YP_003125399.1 KEGG: noc:Noc_0155 hypothetical protein YP_003125400.1 PFAM: globin; KEGG: pla:Plav_2690 globin YP_003125401.1 KEGG: mxa:MXAN_7466 hypothetical protein YP_003125403.1 PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome C class I; KEGG: bac:BamMC406_4624 cytochrome C oxidase mono- heme subunit/FixO YP_003125404.1 PFAM: cytochrome C oxidase subunit I; KEGG: rfr:Rfer_4127 cytochrome C oxidase, subunit I YP_003125405.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sus:Acid_3899 BadM/Rrf2 family transcriptional regulator YP_003125406.1 PFAM: protein of unknown function DUF542 ScdA domain protein; hemerythrin HHE cation binding domain protein; KEGG: ppd:Ppro_3700 hypothetical protein YP_003125407.1 KEGG: aba:Acid345_0364 nitric-oxide reductase YP_003125408.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_1426 GCN5-related N- acetyltransferase YP_003125411.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bat:BAS3254 hypothetical protein YP_003125412.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ade:Adeh_0546 AraC family transcriptional regulator YP_003125413.1 KEGG: bba:Bd3290 hypothetical protein YP_003125414.1 KEGG: mxa:MXAN_6226 hypothetical protein YP_003125415.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1629 AraC family transcription regulator YP_003125417.1 KEGG: scl:sce6061 kinase YP_003125418.1 PFAM: protein of unknown function DUF549; KEGG: hypothetical protein YP_003125419.1 PFAM: calcium-binding protein; KEGG: rpi:Rpic_3389 signal transduction protein with EFhand domain YP_003125420.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: ccv:CCV52592_0578 Na+/H+ antiporter YP_003125421.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; GCN5-related N-acetyltransferase; KEGG: saz:Sama_1564 peptidyl-dipeptidase DCP YP_003125422.1 KEGG: sus:Acid_0470 Ig family protein YP_003125423.1 KEGG: bcb:BCB4264_A3097 acetyltransferase, GNAT family YP_003125424.1 KEGG: swp:swp_2724 hypothetical protein swp_2724 YP_003125425.1 KEGG: gme:Gmet_2877 hypothetical protein YP_003125426.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: bja:blr1552 methylamine utilization protein precursor YP_003125427.1 PFAM: metallophosphoesterase; KEGG: sse:Ssed_1747 hypothetical protein YP_003125428.1 PFAM: exonuclease RNase T and DNA polymerase III; KEGG: afw:Anae109_0222 hypothetical protein YP_003125429.1 TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS; KEGG: scl:sce3738 dihydrouridine synthase TIM- barrel protein nifR3 YP_003125430.1 KEGG: nmu:Nmul_A0462 hypothetical protein YP_003125431.1 KEGG: spe:Spro_1402 hypothetical protein YP_003125432.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mxa:MXAN_4081 ATP-dependent RNA helicase RhlE YP_003125433.1 PFAM: regulatory protein TetR; KEGG: bac:BamMC406_6291 TetR family transcriptional regulator YP_003125434.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: ppd:Ppro_2206 major facilitator transporter YP_003125435.1 PFAM: isochorismatase hydrolase; KEGG: bav:BAV0718 isochorismatase-family hydrolase YP_003125437.1 KEGG: mxa:MXAN_0055 hypothetical protein YP_003125438.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: eca:ECA2839 lipid kinase YP_003125439.1 KEGG: predicted protein YP_003125441.1 PFAM: alpha/beta hydrolase; KEGG: bsu:BSU34100 alpha/beta hydrolase YP_003125442.1 KEGG: bat:BAS2138 hypothetical protein YP_003125444.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region YP_003125445.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003125446.1 PFAM: protein of unknown function DUF1080; KEGG: ccs:CCNA_01698 cycloisomaltooligosaccharide glucanotransferase precursor YP_003125448.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; KEGG: scl:sce3841 AAA ATPases YP_003125450.1 KEGG: scl:sce6069 hypothetical protein YP_003125451.1 KEGG: mxa:MXAN_7008 hypothetical protein YP_003125453.1 PFAM: ABC-1 domain protein; KEGG: sde:Sde_3886 unusual protein kinase-like YP_003125454.1 KEGG: cps:CPS_2654 PKD domain-containing protein YP_003125455.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125456.1 PFAM: RagB/SusD domain protein YP_003125458.1 KEGG: aba:Acid345_1594 hypothetical protein YP_003125459.1 KEGG: lch:Lcho_4243 hypothetical protein YP_003125460.1 PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family YP_003125461.1 TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: rce:RC1_0570 signal peptide peptidase SppA, 67K type YP_003125462.1 KEGG: mlo:mll0786 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK YP_003125463.1 PFAM: deoxynucleoside kinase; KEGG: tbd:Tbd_2052 deoxynucleoside kinase YP_003125464.1 PFAM: catalase domain protein; KEGG: bbr:BB4994 catalase YP_003125465.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: hypothetical protein; K07007 YP_003125467.1 PFAM: lipase class 3; KEGG: lipase YP_003125469.1 KEGG: GH10488 gene product from transcript GH10488- RA YP_003125470.1 KEGG: pag:PLES_13471 COG3179: predicted chitinase YP_003125471.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2118 signal transduction histidine kinase YP_003125472.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein YP_003125473.1 KEGG: bpy:Bphyt_5916 hypothetical protein YP_003125474.1 KEGG: aba:Acid345_0010 hypothetical protein YP_003125476.1 PFAM: protein of unknown function DUF892; KEGG: mlo:mll9661 hypothetical protein YP_003125477.1 PFAM: PEBP family protein; KEGG: gur:Gura_1648 PEBP family protein YP_003125478.1 PFAM: NUDIX hydrolase; KEGG: gbm:Gbem_2817 NUDIX hydrolase YP_003125479.1 KEGG: erythrocyte membrane protein YP_003125482.1 PFAM: cadherin; NHL repeat containing protein; KEGG: ppw:PputW619_0675 pyrrolo-quinoline quinone YP_003125483.1 KEGG: ABC transporter subunit; K01999 branched- chain amino acid transport system substrate-binding protein YP_003125484.1 PFAM: hypothetical protein; KEGG: mno:Mnod_4880 tail collar domain protein YP_003125485.1 PFAM: hypothetical protein; KEGG: mno:Mnod_4880 tail collar domain protein YP_003125486.1 PFAM: oxidoreductase domain protein; KEGG: smt:Smal_3812 oxidoreductase domain protein YP_003125487.1 PFAM: fatty acid desaturase; Sphingolipid delta4- desaturase DES; KEGG: msl:Msil_1351 fatty acid desaturase YP_003125488.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003125489.1 PFAM: heparinase II/III family protein; KEGG: rlt:Rleg2_5337 heparinase II/III family protein YP_003125490.1 KEGG: similar to mical YP_003125492.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: scl:sce5623 SAM-dependent methyltransferase YP_003125493.1 KEGG: hypothetical protein YP_003125494.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: amc:MADE_01969 alcohol dehydrogenase, zinc- containing YP_003125495.1 PFAM: helix-turn-helix HxlR type; KEGG: bha:BH0737 cinnamoyl ester hydrolase YP_003125498.1 PFAM: OmpA/MotB domain protein; KEGG: tbd:Tbd_2454 outer membrane protein YP_003125500.1 KEGG: abo:ABO_0057 hypothetical protein YP_003125501.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor YP_003125502.1 KEGG: hha:Hhal_1430 protein-L-isoaspartate O- methyltransferase; TIGRFAM: protein-L-isoaspartate O- methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O- methyltransferase YP_003125503.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: bcr:BCAH187_A5064 phosphoglucomutase/phosphomannomutase family protein YP_003125504.1 PFAM: phosphoribosyltransferase; KEGG: bcy:Bcer98_2540 pyrimidine regulatory protein PyrR YP_003125505.1 KEGG: gbm:Gbem_2087 protein of unknown function DUF224 cysteine-rich region domain protein YP_003125506.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: scl:sce0368 iron-sulfur protein, transmembrane protein YP_003125507.1 KEGG: vco:VC0395_0865 hypothetical protein YP_003125508.1 PFAM: Negative transcriptional regulator; KEGG: bha:BH0412 transcriptional repressor of sporulation and degradative enzyme production YP_003125513.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: gsu:GSU0983 hypothetical protein YP_003125514.1 KEGG: vfm:VFMJ11_B0048 hypothetical protein YP_003125517.1 KEGG: abc:ACICU_03562 chitinase YP_003125520.1 KEGG: aby:ABAYE1809 hypothetical protein YP_003125522.1 PFAM: glycoside hydrolase family 28; SMART: hypothetical protein; KEGG: sde:Sde_0953 glycoside hydrolase family protein YP_003125523.1 KEGG: hch:HCH_04344 hypothetical protein YP_003125524.1 PFAM: Domain of unknown function DUF1814 YP_003125525.1 PFAM: aspartyl/Asparaginyl beta-hydroxylase; KEGG: aba:Acid345_2739 aspartyl/asparaginyl beta- hydroxylase YP_003125526.1 KEGG: aba:Acid345_2739 aspartyl/asparaginyl beta- hydroxylase YP_003125527.1 PFAM: adenylylsulfate kinase; KEGG: scl:sce5751 sulfate adenylyltransferase YP_003125531.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator YP_003125532.1 PFAM: glycoside hydrolase family 24; KEGG: cvi:CV_0727 phage-related lysozyme YP_003125533.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: vco:VC0395_0623 sensor protein UhpB YP_003125534.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: vco:VC0395_A0896 transcriptional regulator, LuxR family YP_003125535.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_003125536.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dds:Ddes_1305 sigma54 specific transcriptional regulator, fis family YP_003125537.1 KEGG: gme:Gmet_2299 lipoprotein YP_003125538.1 KEGG: hypothetical protein YP_003125539.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: ank:AnaeK_2334 preprotein translocase, SecG subunit YP_003125540.1 PFAM: aminodeoxychorismate lyase; KEGG: glo:Glov_2459 aminodeoxychorismate lyase YP_003125541.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: ribonuclease BN; K07058 YP_003125542.1 KEGG: scl:sce6073 thiol-disulfide isomerase YP_003125543.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: sus:Acid_1533 peptidase M14, carboxypeptidase A YP_003125544.1 KEGG: hhe:HH0575 hypothetical protein YP_003125545.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_3441 TonB-dependent receptor YP_003125546.1 KEGG: stt:t3970 gamma-glutamyltranspeptidase periplasmic precursor; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003125547.1 PFAM: protein of unknown function DUF1572; KEGG: aba:Acid345_4703 protein of unknown function DUF1572 YP_003125549.1 PFAM: aminotransferase class I and II; KEGG: afr:AFE_3011 8-amino-7-oxononanoate synthase YP_003125550.1 PFAM: GumN family protein; KEGG: ilo:IL0078 hypothetical protein YP_003125551.1 PFAM: GumN family protein; KEGG: rlt:Rleg2_3662 GumN family protein YP_003125552.1 PFAM: protein of unknown function DUF490; KEGG: bqu:BQ00410 hypothetical protein YP_003125553.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: bha:BH1556 bifunctional 3,4-dihydroxy-2- butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_003125554.1 PFAM: TonB-dependent receptor plug; KEGG: xop:PXO_01318 TonB-dependent outer membrane receptor/Oar-like protein YP_003125557.1 KEGG: sus:Acid_3928 esterase YP_003125558.1 KEGG: sus:Acid_3927 glutathione synthase/ribosomal protein S6 modification glutaminyl transferase-like protein YP_003125559.1 ATP-dependent carboxylate-amine ligase YP_003125560.1 KEGG: scl:sce3772 hypothetical protein YP_003125561.1 KEGG: sus:Acid_3924 hypothetical protein YP_003125562.1 KEGG: sus:Acid_0979 xanthan lyase YP_003125563.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: aba:Acid345_0203 UBA/ThiF-type NAD/FAD binding protein YP_003125564.1 PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; KEGG: bha:BH2504 serine/threonine protein kinase YP_003125565.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_003125566.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: afw:Anae109_1090 4Fe-4S ferredoxin iron- sulfur binding domain-containing protein YP_003125567.1 PFAM: acyl-CoA reductase; KEGG: hypothetical protein YP_003125568.1 KEGG: cti:RALTA_B0169 periplasmic protease; contains two PDZ domain; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003125569.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: ban:BA5691 response regulator LytR YP_003125570.1 PFAM: histidine kinase internal region; two component regulator propeller; KEGG: hypothetical protein YP_003125571.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_003125572.1 KEGG: Hypothetical protein CBG04553; K10695 E3 ubiquitin-protein ligase RNF1/2 YP_003125573.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation YP_003125574.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_003125575.1 KEGG: GA22871 gene product from transcript GA22871- RA YP_003125576.1 TIGRFAM: metal dependent phophohydrolase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: hypothetical protein YP_003125577.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: pha:PSHAa0028 double-stranded RNA-binding protein YP_003125578.1 PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3800 glycosyl transferase, group 1 YP_003125579.1 KEGG: mxa:MXAN_6779 2,3,4,5-tetrahydropyridine-2- carboxylate N-succinyltransferase YP_003125580.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein YP_003125581.1 PFAM: integrase catalytic region; KEGG: rms:RMA_0748 transposase YP_003125582.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_0842 glyoxalase/bleomycin resistance protein/dioxygenase YP_003125583.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_2963 transcriptional regulator, AraC family YP_003125584.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: cps:CPS_0824 short chain dehydrogenase/reductase family oxidoreductase YP_003125585.1 PFAM: OsmC family protein; KEGG: dds:Ddes_1698 OsmC family protein YP_003125586.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: pst:PSPTO_2697 oxidoreductase, zinc-binding YP_003125587.1 PFAM: redoxin; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: swp:swp_4660 thioredoxin YP_003125589.1 KEGG: ajs:Ajs_1383 hypothetical protein YP_003125590.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_2097 hypothetical protein YP_003125591.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: vfm:VFMJ11_A1186 flavin monoamine oxidase family protein YP_003125592.1 KEGG: bcr:BCAH187_A1543 hypothetical protein YP_003125593.1 PFAM: thioredoxin domain protein; KEGG: dde:Dde_2067 thioredoxin YP_003125594.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_3605 hypothetical protein YP_003125595.1 PFAM: OsmC family protein; KEGG: msu:MS2004 hypothetical protein YP_003125596.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: vfm:VFMJ11_A1186 flavin monoamine oxidase family protein YP_003125597.1 PFAM: major facilitator superfamily MFS_1; KEGG: abc:ACICU_01459 major facilitator superfamily permease YP_003125598.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase YP_003125600.1 PFAM: beta-lactamase; KEGG: mxa:MXAN_2136 beta-lactamase YP_003125602.1 KEGG: hypothetical protein YP_003125604.1 PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU05290 hypothetical protein YP_003125605.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ppw:PputW619_3210 alcohol dehydrogenase YP_003125614.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nar:Saro_2473 short-chain dehydrogenase/reductase SDR YP_003125615.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family YP_003125616.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_4607 hypothetical protein YP_003125617.1 KEGG: bcz:BCZK3228 hypothetical protein YP_003125618.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein YP_003125619.1 PFAM: protein of unknown function DUF1006; KEGG: swd:Swoo_4914 hypothetical protein YP_003125620.1 KEGG: aba:Acid345_2240 hypothetical protein YP_003125622.1 KEGG: scl:sce1819 hypothetical protein YP_003125624.1 KEGG: mxa:MXAN_2256 thioredoxin YP_003125625.1 KEGG: dal:Dalk_5077 domain of unknown function DUF1877 YP_003125626.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: vha:VIBHAR_01258 pseudouridylate synthase YP_003125627.1 KEGG: yen:YE2901 hypothetical protein YP_003125628.1 KEGG: aba:Acid345_1191 hypothetical protein YP_003125631.1 KEGG: cco:CCC13826_1047 periplasmic protein YP_003125632.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003125633.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein YP_003125634.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase YP_003125635.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: afw:Anae109_0474 trans-aconitate 2- methyltransferase YP_003125636.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rfr:Rfer_2543 hypothetical protein YP_003125637.1 PFAM: glycoside hydrolase family 43; KEGG: mxa:MXAN_5247 glycosyl hydrolase, family 43 YP_003125639.1 KEGG: acp:A2cp1_3395 hypothetical protein YP_003125640.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; Arylesterase; KEGG: bph:Bphy_5161 gluconolactonase YP_003125641.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_3742 alpha-L-rhamnosidase YP_003125642.1 KEGG: pfl:PFL_6130 hypothetical protein YP_003125643.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: nmn:NMCC_0464 6-pyruvoyl tetrahydrobiopterin synthase YP_003125645.1 PFAM: DoxX family protein; KEGG: scl:sce5426 hypothetical protein YP_003125646.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: hch:HCH_03204 hypothetical protein YP_003125648.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cvi:CV_1674 isoquinoline 1-oxidoreductase YP_003125649.1 PFAM: esterase; KEGG: shn:Shewana3_1514 esterase YP_003125653.1 KEGG: rpc:RPC_3570 sec-C metal-binding protein YP_003125655.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pin:Ping_2286 response regulator GltR YP_003125657.1 PFAM: glycoside hydrolase family 43; KEGG: mxa:MXAN_5247 glycosyl hydrolase, family 43 YP_003125658.1 KEGG: sus:Acid_2708 short chain dehydrogenase YP_003125659.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_3605 hypothetical protein YP_003125660.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: vfm:VFMJ11_A1186 flavin monoamine oxidase family protein YP_003125661.1 KEGG: sde:Sde_3604 hypothetical protein YP_003125662.1 KEGG: nmu:Nmul_A2110 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B YP_003125663.1 KEGG: ilo:IL2039 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_003125664.1 PFAM: thioredoxin domain protein; KEGG: AGAP012940-PA YP_003125665.1 KEGG: neu:NE0084 thioredoxin YP_003125666.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4302 GntR family transcriptional regulator YP_003125667.1 KEGG: sbl:Sbal_3687 hypothetical protein YP_003125668.1 KEGG: rpi:Rpic_3640 outer membrane autotransporter barrel domain protein YP_003125669.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein YP_003125671.1 KEGG: sit:TM1040_3458 hypothetical protein YP_003125672.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003125673.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region YP_003125674.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1794 hypothetical protein YP_003125675.1 KEGG: bur:Bcep18194_B0526 hypothetical protein YP_003125679.1 KEGG: efe:EFER_0595 hypothetical protein froml phage origin YP_003125681.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: ppd:Ppro_3008 multi-sensor hybrid histidine kinase YP_003125682.1 PFAM: histidine kinase dimerisation/phosphoacceptor; hypothetical protein; ATP-binding region ATPase domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2118 signal transduction histidine kinase YP_003125683.1 PFAM: inner-membrane translocator; KEGG: bbr:BB2756 permease component of ABC transporter protein YP_003125684.1 PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: mrd:Mrad2831_2899 ABC transporter related YP_003125685.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002318 branched-chain amino acid ABC transporter, ATP-binding protein YP_003125686.1 PFAM: extracellular ligand-binding receptor; KEGG: oca:OCAR_6800 ABC branched chain amino acid family transporter YP_003125688.1 PFAM: cupin; KEGG: mmr:Mmar10_1976 hypothetical protein YP_003125689.1 KEGG: sus:Acid_1651 metal-dependent hydrolase YP_003125691.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ccs:CCNA_01283 NAD-dependent oxidoreductase YP_003125692.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003125693.1 KEGG: saz:Sama_0297 endo-alpha-mannosidase YP_003125694.1 PFAM: protein of unknown function DUF34; KEGG: aba:Acid345_2075 hypothetical protein YP_003125695.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: nmu:Nmul_A0927 phosphoesterase, PA- phosphatase related YP_003125696.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: msl:Msil_1882 lytic transglycosylase catalytic YP_003125697.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: bha:BH2887 hypothetical protein YP_003125698.1 KEGG: xca:xccb100_4421 exported conserved hypothetical protein YP_003125700.1 PFAM: cytochrome C class I; KEGG: abu:Abu_1734 hypothetical protein YP_003125701.1 KEGG: abu:Abu_1735 cytochrome YP_003125703.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator YP_003125705.1 PFAM: electron transport protein SCO1/SenC; KEGG: sus:Acid_4379 electron transport protein SCO1/SenC YP_003125706.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cps:CPS_0659 AraC family transcriptional regulator YP_003125707.1 KEGG: conserved hypothetical protein YP_003125709.1 KEGG: mpo:Mpop_0711 hypothetical protein YP_003125710.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aba:Acid345_2719 glyoxalase/bleomycin resistance protein/dioxygenase YP_003125712.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sus:Acid_2309 response regulator receiver protein YP_003125713.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003125714.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sus:Acid_7834 RND efflux system outer membrane lipoprotein YP_003125715.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1 YP_003125716.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sat:SYN_02948 acriflavin resistance periplasmic protein YP_003125717.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pmy:Pmen_0809 3-beta hydroxysteroid dehydrogenase/isomerase YP_003125718.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB0725 hypothetical protein YP_003125719.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group YP_003125720.1 PFAM: alanine racemase; KEGG: sml:Smlt2931 racemase YP_003125721.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: acp:A2cp1_1086 transcriptional regulator, ArsR family YP_003125722.1 in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine YP_003125723.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: pca:Pcar_1772 protein-tyrosine-phosphatase YP_003125724.1 TIGRFAM: arsenic resistance protein; PFAM: bile acid:sodium symporter; KEGG: dar:Daro_2636 arsenic resistance protein ACR3 YP_003125726.1 SMART: helix-turn-helix domain protein; KEGG: pmr:PMI1817 transcriptional regulator YP_003125729.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_0087 major facilitator family transporter YP_003125730.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1629 AraC family transcription regulator YP_003125731.1 PFAM: outer membrane efflux protein; KEGG: dde:Dde_3627 outer membrane efflux protein YP_003125732.1 PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_3406 secretion protein HlyD family protein YP_003125733.1 KEGG: sme:SM_b20698 transport protein YP_003125734.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abm:ABSDF1534 AraC family transcriptional regulator YP_003125735.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: bcj:BCAL0828 G/U mismatch-specific DNA glycosylase YP_003125736.1 KEGG: rce:RC1_2264 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: transketolase central region; dehydrogenase E1 component YP_003125737.1 KEGG: bsu:BSU32150 transcriptional regulator YP_003125738.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: fph:Fphi_1548 acetolactate synthase large subunit YP_003125739.1 PFAM: TonB-dependent receptor plug; KEGG: sfr:Sfri_2818 TonB-dependent receptor, plug YP_003125741.1 PFAM: alpha-L-rhamnosidase; KEGG: hypothetical protein YP_003125742.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bba:Bd3673 hypothetical protein YP_003125743.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_0923 oxidoreductase, short chain dehydrogenase/reductase family YP_003125744.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003125745.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003125746.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_3591 enoyl-CoA hydratase/isomerase YP_003125748.1 PFAM: Domain of unknown function DUF1801; KEGG: bsu:BSU05210 hypothetical protein YP_003125751.1 PFAM: Protein of unknown function DUF1963; KEGG: cco:CCC13826_0556 peptide methionine sulfoxide reductase MsrA/MsrB YP_003125752.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mll2196 short chain oxidoreductase YP_003125753.1 PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: hypothetical protein YP_003125754.1 KEGG: mmr:Mmar10_1592 peptidase S15 YP_003125755.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bcb:BCB4264_A3720 AhpC/TSA family protein YP_003125757.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125758.1 PFAM: FecR protein; KEGG: atc:AGR_L_2871 hypothetical protein YP_003125759.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bbt:BBta_0709 RNA polymerase sigma factor YP_003125760.1 PFAM: NUDIX hydrolase; KEGG: mmw:Mmwyl1_1170 NUDIX hydrolase YP_003125762.1 KEGG: sus:Acid_7167 hypothetical protein YP_003125763.1 PFAM: RagB/SusD domain protein YP_003125764.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125765.1 PFAM: FecR protein; KEGG: nwi:Nwi_3080 FecR protein YP_003125766.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ilo:IL1936 DNA-directed RNA polymerase specialized sigma subunit YP_003125767.1 PFAM: glycosidase PH1107-related; glycosyl hydrolase family 32 domain protein; KEGG: sus:Acid_4608 glycosidase, PH1107-related YP_003125768.1 KEGG: cja:CJA_0819 alpha-L-arabinfuranosidase, , abf43M; PFAM: glycoside hydrolase family 43; Ricin B lectin; SMART: Ricin B lectin YP_003125769.1 KEGG: mgm:Mmc1_1210 ADP-ribosyl-(dinitrogen reductase) hydrolase YP_003125771.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; sulfatase; KEGG: bcb:BCB4264_A0459 type I phosphodiesterase/nucleotide pyrophosphatase family protein YP_003125772.1 KEGG: vsp:VS_0240 hypothetical protein YP_003125774.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; helix- turn-helix- domain containing protein AraC type; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; histidine kinase A domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein YP_003125775.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125776.1 PFAM: RagB/SusD domain protein YP_003125777.1 KEGG: gur:Gura_0762 hypothetical protein YP_003125778.1 PFAM: glycosyl hydrolase 53 domain protein; KEGG: asa:ASA_2386 arabinogalactan endo-1,4-beta- galactosidase YP_003125779.1 KEGG: sbm:Shew185_3333 membrane or secreted protein YP_003125780.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: beta-galactosidase YP_003125782.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003125784.1 KEGG: xcc:XCC2029 hypothetical protein YP_003125785.1 PFAM: beta-lactamase; KEGG: sus:Acid_4466 beta-lactamase YP_003125786.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vpa:VP1699 transcriptional regulator ExsA YP_003125787.1 PFAM: aldo/keto reductase; KEGG: rpc:RPC_0451 aldo/keto reductase YP_003125789.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR YP_003125790.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003125791.1 KEGG: mxa:MXAN_2791 protease B YP_003125792.1 KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003125793.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2727 hypothetical protein YP_003125794.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003125796.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: cbu:CBU_1928 acyl-CoA synthetase YP_003125797.1 KEGG: pfo:Pfl01_5132 organic solvent tolerance protein YP_003125798.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: mxa:MXAN_3886 N-acetylmuramoyl-L-alanine amidase domain protein YP_003125799.1 PFAM: hypothetical protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_003125800.1 PFAM: OstA family protein; protein of unknown function DUF1239 YP_003125801.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; KEGG: ent:Ent638_0580 pH-dependent sodium/proton antiporter YP_003125804.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: gsu:GSU1802 YjeF family protein YP_003125805.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_003125806.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce1536 AraC family transcriptional regulator YP_003125808.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein YP_003125811.1 PFAM: Penicillinase repressor; KEGG: mxa:MXAN_4242 transcriptional regulator YP_003125812.1 PFAM: peptidase M56 BlaR1; KEGG: sus:Acid_0899 peptidase M56, BlaR1 YP_003125813.1 PFAM: peptidase C1B bleomycin hydrolase; KEGG: hypothetical protein; K01372 bleomycin hydrolase YP_003125814.1 PFAM: acylphosphatase; KEGG: mca:MCA0713 acylphosphatase YP_003125816.1 TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: hypothetical protein; K01803 triosephosphate isomerase (TIM) YP_003125817.1 KEGG: dps:DP2923 bifunctional GlmU protein YP_003125818.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: sml:Smlt3836 50S ribosomal protein L31 YP_003125819.1 PFAM: protein of unknown function DUF520; KEGG: dde:Dde_2479 nucleotide-binding protein YP_003125820.1 KEGG: cbs:COXBURSA331_A0507 lipoprotein YP_003125821.1 KEGG: ATP-dependent heat shock protein; K03667 ATP- dependent HslUV protease ATP-binding subunit HslU YP_003125823.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_2486 sigma-24, ECF subfamily YP_003125824.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor YP_003125825.1 PFAM: hemerythrin HHE cation binding domain protein; KEGG: sus:Acid_5579 hemerythrin HHE cation binding domain-containing protein YP_003125826.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mxa:MXAN_0370 prolipoprotein diacylglyceryl transferase YP_003125827.1 PFAM: protein of unknown function DUF1094; KEGG: bha:BH1716 hypothetical protein YP_003125828.1 PFAM: heat shock protein Hsp20; KEGG: aba:Acid345_4766 heat shock protein HSP20 YP_003125829.1 KEGG: rfe:RF_0391 major facilitator superfamily permease YP_003125830.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: ftm:FTM_0587 arginine decarboxylase YP_003125831.1 PFAM: WbqC-like family protein; KEGG: bur:Bcep18194_A3335 hypothetical protein YP_003125832.1 KEGG: pca:Pcar_0619 hypothetical protein YP_003125833.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bcr:BCAH187_A3779 heavy metal-transporting ATPase YP_003125834.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bsu:BSU15560 orotate phosphoribosyltransferase YP_003125835.1 PFAM: NUDIX hydrolase; KEGG: GM22565 gene product from transcript GM22565- RA YP_003125836.1 PFAM: thioesterase superfamily protein; KEGG: ppd:Ppro_2603 hypothetical protein YP_003125837.1 KEGG: bcy:Bcer98_2632 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003125838.1 PFAM: Protein of unknown function methylase KEGG: ppd:Ppro_2191 methyltransferase YP_003125840.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dde:Dde_2418 MATE efflux family protein YP_003125841.1 KEGG: AGAP012364-PA YP_003125842.1 PFAM: dihydroneopterin aldolase; KEGG: mlo:mll0787 dihydroneopterin aldolase YP_003125843.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gbe:GbCGDNIH1_0720 thioredoxin reductase YP_003125844.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD YP_003125845.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: threonine aldolase family protein YP_003125846.1 TIGRFAM: valyl-tRNA synthetase; KEGG: bsu:BSU28090 valyl-tRNA synthetase YP_003125848.1 KEGG: bba:Bd1448 hypothetical protein YP_003125849.1 KEGG: psa:PST_3559 L-serine dehydratase, iron- sulfur-dependent, single chain form; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_003125850.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: asu:Asuc_0679 peptidylprolyl isomerase FKBP- type YP_003125851.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bas:BUsg514 FKBP-type peptidyl-prolyl cis- trans isomerase FkpA precursor YP_003125852.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: dvl:Dvul_1196 chaperonin GroEL YP_003125853.1 PFAM: chaperonin Cpn10; KEGG: nwi:Nwi_2191 co-chaperonin GroES YP_003125854.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: dal:Dalk_3316 NusB antitermination factor YP_003125855.1 PFAM: protein of unknown function DUF1573; KEGG: gme:Gmet_1031 hypothetical protein YP_003125856.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: yajC; preprotein tranlocase protein; K03210 preprotein translocase YajC subunit YP_003125857.1 KEGG: apa:APP7_0935 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_003125858.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dvl:Dvul_1144 SNF2-related protein YP_003125859.1 PFAM: glycoside hydrolase family 5; KEGG: aba:Acid345_1689 glycoside hydrolase, family 5 YP_003125861.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_003125862.1 KEGG: hypothetical protein YP_003125863.1 KEGG: bcj:BCAM1137 lipoprotein YP_003125864.1 PFAM: aminotransferase class I and II; KEGG: mfa:Mfla_1319 aminotransferase YP_003125866.1 PFAM: peptidase M23; KEGG: gbm:Gbem_3591 peptidase M23B YP_003125867.1 KEGG: gur:Gura_0654 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase YP_003125868.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: gbm:Gbem_1111 methyltransferase type 12 YP_003125869.1 KEGG: mxa:MXAN_2791 protease B YP_003125870.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: nar:Saro_1945 dihydrolipoamide dehydrogenase YP_003125871.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: eca:ECA2646 outer-membrane lipoprotein carrier protein YP_003125872.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bcb:BCB4264_A3893 stage III sporulation protein E YP_003125873.1 PFAM: peptidase S15; KEGG: mmr:Mmar10_1592 peptidase S15 YP_003125874.1 PFAM: protein of unknown function DUF423; KEGG: ppw:PputW619_0359 hypothetical protein YP_003125875.1 PFAM: shikimate kinase; KEGG: gur:Gura_1819 shikimate kinase YP_003125876.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: rso:RSc1804 hypothetical protein YP_003125877.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_003125878.1 PFAM: cytochrome C class I; KEGG: cvi:CV_0175 cytochrome C transmembrane protein YP_003125879.1 PFAM: protein of unknown function DUF1080; KEGG: amc:MADE_00436 multi-domain protein YP_003125880.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: scl:sce0927 TonB-dependent receptor YP_003125881.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003125882.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NmrA family protein; KEGG: bac:BamMC406_3548 NAD-dependent epimerase/dehydratase YP_003125883.1 KEGG: sus:Acid_1939 hypothetical protein YP_003125884.1 KEGG: ecv:APECO1_3835 hypothetical protein YP_003125885.1 KEGG: msl:Msil_0406 hypothetical protein YP_003125886.1 PFAM: acyltransferase 3; KEGG: xcb:XC_3949 acyltransferase YP_003125887.1 PFAM: protein of unknown function DUF1080; KEGG: swi:Swit_1630 hypothetical protein YP_003125888.1 KEGG: sbl:Sbal_0349 hypothetical protein YP_003125889.1 PFAM: cyclase/dehydrase; KEGG: cyclase/dehydrase YP_003125890.1 KEGG: afr:AFE_0362 hypothetical protein YP_003125891.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sus:Acid_5733 redoxin domain-containing protein YP_003125892.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bba:Bd2520 lactoylglutathione lyase YP_003125893.1 PFAM: Protein of unknown function DUF829, eukaryotic; KEGG: hch:HCH_00846 alpha/beta superfamily hydrolase/acyltransferase YP_003125894.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: mxa:MXAN_5223 4-carboxymuconolactone decarboxylase domain protein YP_003125895.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: bha:BH0672 RNA polymerase sigma factor SigJ YP_003125896.1 PFAM: alanine racemase; KEGG: hypothetical protein YP_003125897.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bha:BH3798 acyl-CoA dehydrogenase YP_003125898.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: hypothetical protein; K01476 arginase YP_003125899.1 KEGG: sus:Acid_7575 hypothetical protein YP_003125901.1 PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: eba:ebA6563 fructosamine kinase YP_003125902.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator YP_003125903.1 PFAM: protein of unknown function DUF177 YP_003125904.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: sml:Smlt1025 50S ribosomal protein L32 YP_003125905.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: bce:BC3851 glycerol-3-phosphate acyltransferase PlsX YP_003125906.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_5184 sensor histidine kinase YP_003125907.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era YP_003125908.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Resolvase RNase H domain protein fold; KEGG: sfu:Sfum_1838 RNA binding S1 domain protein YP_003125909.1 KEGG: aav:Aave_1451 hypothetical protein YP_003125910.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bch:Bcen2424_0544 enoyl-CoA hydratase YP_003125911.1 KEGG: rce:RC1_2066 hypothetical protein YP_003125912.1 KEGG: bsu:BSU39230 cell wall-associated protein precursor (CWBP200, 105, 62) YP_003125913.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: sml:Smlt2533 DNA-formamidopyrimidine glycosylase YP_003125914.1 KEGG: Mgam; maltase-glucoamylase YP_003125915.1 KEGG: ade:Adeh_2155 hypothetical protein YP_003125916.1 KEGG: mxa:MXAN_0652 hypothetical protein YP_003125917.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: aba:Acid345_4773 excinuclease ABC, A subunit YP_003125918.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: TPR Domain containing protein YP_003125919.1 KEGG: sde:Sde_2993 endoglucanase-like YP_003125921.1 PFAM: NmrA family protein; KEGG: ank:AnaeK_1072 NmrA family protein YP_003125925.1 PFAM: heat shock protein Hsp20; KEGG: rfe:RF_1004 small heat shock protein YP_003125926.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase YP_003125930.1 KEGG: mes:Meso_3789 relaxase/mobilization nuclease domain YP_003125931.1 PFAM: mobilisation protein; KEGG: mob protein YP_003125932.1 PFAM: TRAG family protein; KEGG: atc:AGR_L_58 component of type IV secretion system YP_003125937.1 KEGG: bph:Bphy_1926 hypothetical protein YP_003125938.1 PFAM: integrase family protein; KEGG: bph:Bphy_1927 integrase family protein YP_003125939.1 TIGRFAM: conjugative relaxase domain protein; PFAM: TrwC relaxase; KEGG: sal:Sala_2489 TrwC protein YP_003125940.1 KEGG: sml:Smlt2076 hypothetical protein YP_003125941.1 KEGG: xca:xccb100_4358 hypothetical protein YP_003125942.1 PFAM: domain of unknown function DUF1738; KEGG: nha:Nham_0574 antirestriction protein YP_003125943.1 KEGG: dps:DPPA08 related to DNA primase PrmN1 (partial length) YP_003125949.1 PFAM: resolvase domain protein; KEGG: dar:Daro_0802 resolvase, N-terminal YP_003125950.1 SMART: AAA ATPase; KEGG: nme:NMB2008 ABC transporter, ATP-binding protein-related protein YP_003125951.1 PFAM: transposase IS3/IS911 family protein; KEGG: lpp:lpp0199 hypothetical protein YP_003125953.1 PFAM: lipolytic protein G-D-S-L family YP_003125957.1 KEGG: pha:PSHAa1376 hypothetical protein YP_003125961.1 KEGG: kpe:KPK_2956 hypothetical protein YP_003125962.1 PFAM: protein of unknown function UPF0118; KEGG: mlo:mlr4869 hypothetical protein YP_003125963.1 KEGG: smd:Smed_5397 hypothetical protein YP_003125964.1 PFAM: peptidase S41; KEGG: ban:BA2234 hypothetical protein YP_003125965.1 KEGG: gur:Gura_2274 virion core protein (lumpy skin disease virus)-like protein YP_003125967.1 KEGG: hch:HCH_01892 electron transport complex protein RnfC YP_003125970.1 KEGG: mlo:mll3591 alpha-L-arabinofuranosidase YP_003125971.1 KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein YP_003125972.1 PFAM: RagB/SusD domain protein YP_003125973.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003125974.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein YP_003125976.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: acr:Acry_1333 ECF subfamily RNA polymerase sigma-24 factor YP_003125977.1 KEGG: similar to mucin YP_003125978.1 PFAM: alpha/beta hydrolase; KEGG: cps:CPS_0828 alpha/beta fold family hydrolase YP_003125979.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator, TetR family YP_003125980.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: hypothetical protein YP_003125981.1 KEGG: ade:Adeh_3207 hypothetical protein YP_003125982.1 KEGG: abb:ABBFA_000249 regulatory protein YP_003125983.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: short-chain dehydrogenase/reductase (SDR) family protein YP_003125984.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003125985.1 KEGG: net:Neut_1347 prolyl 4-hydroxylase, alpha subunit YP_003125986.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mms:mma_1920 quinone oxidoreductase YP_003125987.1 PFAM: beta-lactamase; KEGG: mrd:Mrad2831_2416 beta-lactamase YP_003125989.1 PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein YP_003125991.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: nha:Nham_4372 acetate kinase YP_003125992.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bja:bll2518 phosphoketolase YP_003125993.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pca:Pcar_2913 MarR family transcriptional regulator YP_003125995.1 TIGRFAM: conserved repeat domain protein; KEGG: aby:ABAYE0792 hypothetical protein YP_003125996.1 KEGG: bid:Bind_0038 signal peptide protein YP_003125998.1 PFAM: YceI family protein; KEGG: mxa:MXAN_7382 hypothetical protein YP_003125999.1 KEGG: sus:Acid_3744 hypothetical protein YP_003126001.1 KEGG: net:Neut_1085 hypothetical protein YP_003126002.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: aba:Acid345_2693 sigma-24, ECF subfamily YP_003126003.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; Sigma-70 region 4 type 2; KEGG: FecR iron sensor protein YP_003126004.1 KEGG: GI12165 gene product from transcript GI12165- RA YP_003126007.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: abo:ABO_1265 oxidoreductase YP_003126008.1 PFAM: CheB methylesterase; KEGG: ppd:Ppro_3165 signal transduction histidine kinase with CheB and CheR activity YP_003126009.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; mRNA capping enzyme; DNA primase small subunit; KEGG: gbm:Gbem_0128 DNA ligase D YP_003126010.1 KEGG: bpy:Bphyt_3433 histone H1-like protein YP_003126011.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region YP_003126012.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003126013.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hypothetical protein YP_003126015.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll2336 transcriptional regulatory protein YP_003126016.1 PFAM: inositol monophosphatase; KEGG: rde:RD1_2507 inositol-1-monophosphatase YP_003126019.1 KEGG: pmy:Pmen_2325 hypothetical protein YP_003126021.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: mxa:MXAN_5573 rhs element Vgr family protein YP_003126022.1 KEGG: hch:HCH_03531 hypothetical protein YP_003126023.1 PFAM: hypothetical protein; KEGG: hch:HCH_03533 rhs family protein YP_003126025.1 KEGG: bba:Bd3309 hypothetical protein YP_003126028.1 KEGG: ccs:CCNA_01600 hypothetical protein YP_003126029.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: aba:Acid345_4056 L-alanine-DL-glutamate epimerase fmaily protein YP_003126030.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: saz:Sama_2611 ECF subfamily RNA polymerase sigma-24 factor YP_003126031.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family YP_003126032.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126033.1 PFAM: RagB/SusD domain protein YP_003126034.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein YP_003126035.1 TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: gme:Gmet_3532 chaperone DnaK YP_003126036.1 PFAM: OmpA/MotB domain protein; KEGG: abo:ABO_1527 OmpA family protein YP_003126038.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_003126039.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: bcr:BCAH187_A4528 TPR domain protein YP_003126040.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: Cda; cytidine deaminase YP_003126041.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: pcr:Pcryo_0365 peptidase S26A, signal peptidase I YP_003126042.1 KEGG: bcb:BCB4264_A4227 BioH protein YP_003126043.1 PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: two component, sigma54 specific, transcriptional regulator, Fis family YP_003126044.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mxa:MXAN_1572 serine O- acetyltransferase YP_003126045.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide YP_003126046.1 PFAM: transketolase central region; transketolase domain protein; KEGG: rru:Rru_A1880 pyruvate dehydrogenase subunit beta YP_003126048.1 KEGG: hypothetical protein; K00626 acetyl-CoA C- acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003126051.1 KEGG: bba:Bd2562 hypothetical protein YP_003126052.1 PFAM: RagB/SusD domain protein YP_003126053.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126054.1 PFAM: FecR protein; KEGG: pau:PA14_46650 transmembrane sensor YP_003126055.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: sus:Acid_7860 ECF subfamily RNA polymerase sigma-24 factor YP_003126056.1 KEGG: bha:BH1375 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003126057.1 PFAM: dihydrofolate reductase region; KEGG: pst:PSPTO_0437 dihydrofolate reductase YP_003126058.1 KEGG: dar:Daro_0593 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase YP_003126060.1 PFAM: proline dehydrogenase; KEGG: hypothetical protein YP_003126061.1 PFAM: FecR protein; KEGG: nwi:Nwi_3080 FecR protein YP_003126063.1 PFAM: FAD dependent oxidoreductase; KEGG: sml:Smlt4354 oxidoreductase YP_003126064.1 PFAM: xylose isomerase; KEGG: sde:Sde_1709 hypothetical protein YP_003126065.1 PFAM: bile acid:sodium symporter; KEGG: stm:STM4195 Na+-dependent transporter YP_003126066.1 KEGG: sus:Acid_3344 demethylmenaquinone methyltransferase-like protein YP_003126067.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_003126068.1 KEGG: sus:Acid_6148 selenocysteine synthase (seryl- tRNASer selenium transferase)-like protein YP_003126069.1 PFAM: endoribonuclease L-PSP; KEGG: sus:Acid_6149 endoribonuclease L-PSP YP_003126070.1 KEGG: hypothetical protein YP_003126071.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126072.1 PFAM: FecR protein; KEGG: pzu:PHZ_c2234 transcriptional regulator YP_003126073.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: abo:ABO_1639 RNA polymerase sigma factor RpoE YP_003126074.1 KEGG: sus:Acid_2804 hypothetical protein YP_003126075.1 PFAM: endonuclease V; KEGG: sde:Sde_3689 endonuclease V YP_003126077.1 KEGG: dac:Daci_4513 hypothetical protein YP_003126078.1 KEGG: mxa:MXAN_0238 hypothetical protein YP_003126079.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein; K01206 alpha-L- fucosidase YP_003126080.1 PFAM: OmpA/MotB domain protein; KEGG: pca:Pcar_1973 chemotaxis protein MotB YP_003126081.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ppw:PputW619_2726 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003126082.1 KEGG: amc:MADE_01275 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein YP_003126083.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: nmu:Nmul_A1028 biopolymer transport protein ExbD/TolR YP_003126084.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein YP_003126085.1 catalyzes the release of the N-terminal amino acid from a tripeptide YP_003126086.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_003126087.1 KEGG: lch:Lcho_4277 hypothetical protein YP_003126088.1 PFAM: thioesterase superfamily protein; KEGG: shn:Shewana3_1733 thioesterase superfamily protein YP_003126089.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sit:TM1040_3571 peptidylprolyl isomerase, FKBP-type YP_003126090.1 KEGG: sat:SYN_02707 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase YP_003126091.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein YP_003126092.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: GH24424 gene product from transcript GH24424- RA YP_003126093.1 PFAM: Fmu (Sun) domain protein; KEGG: vfm:VFMJ11_1352 ribosomal RNA small subunit methyltransferase F YP_003126094.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pmy:Pmen_4433 NAD(P)(+) transhydrogenase (AB- specific) YP_003126095.1 KEGG: eba:ebA4498 pyridine nucleotide transhydrogenase subunit alpha YP_003126096.1 PFAM: alanine dehydrogenase; KEGG: tmz:Tmz1t_1641 alanine dehydrogenase YP_003126097.1 KEGG: sat:SYN_02193 cytoplasmic protein YP_003126099.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: gbm:Gbem_0815 formamidopyrimidine-DNA glycolase, H2TH DNA binding YP_003126100.1 KEGG: hypothetical protein YP_003126101.1 PFAM: protein of unknown function DUF72; KEGG: nis:NIS_1306 hypothetical protein YP_003126102.1 KEGG: mxa:MXAN_1293 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase YP_003126103.1 KEGG: ppg:PputGB1_0785 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase YP_003126104.1 KEGG: ilo:IL0926 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_003126105.1 KEGG: pca:Pcar_3063 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase YP_003126106.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: UROS; uroporphyrinogen III synthase YP_003126107.1 KEGG: urod; uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D) YP_003126108.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_003126109.1 PFAM: delta-aminolevulinic acid dehydratase; KEGG: hypothetical protein YP_003126110.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: ilo:IL2245 glutamate-1-semialdehyde aminotransferase YP_003126111.1 PFAM: phospholipase/carboxylesterase; KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase YP_003126112.1 KEGG: wsu:WS2183 hypothetical protein YP_003126113.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_1105 glycosyl transferase family 2 YP_003126115.1 KEGG: fip; filament-interacting protein YP_003126116.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bba:Bd2516 redox-sensitive transcriptional activator YP_003126117.1 PFAM: peptidase M48 Ste24p; KEGG: ppd:Ppro_3278 peptidase M48, Ste24p YP_003126118.1 PFAM: protein of unknown function DUF205; KEGG: gur:Gura_3922 hypothetical protein YP_003126119.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_003126121.1 PFAM: NIPSNAP family containing protein; KEGG: sus:Acid_2822 NIPSNAP family protein YP_003126122.1 KEGG: sal:Sala_0543 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; polynucleotide phosphorylase, phosphorolytic RNA- binding, bacterial/organelle-type; exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein YP_003126123.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: ngk:NGK_0320 30S ribosomal protein S15 YP_003126124.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gbm:Gbem_1287 cell division ATP-binding protein FtsE YP_003126125.1 PFAM: Penicillinase repressor; KEGG: smt:Smal_3667 transcriptional repressor, CopY family YP_003126126.1 TIGRFAM: TonB family protein; PFAM: peptidase M56 BlaR1; KEGG: swd:Swoo_3738 TonB family protein YP_003126127.1 PFAM: AIR synthase related protein domain protein; KEGG: predicted protein; K01933 phosphoribosylformylglycinamidine cyclo-ligase YP_003126128.1 TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: riboflavin kinase; FAD synthetase; KEGG: sat:SYN_01948 riboflavin kinase / FMN adenylyltransferase YP_003126129.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: bba:Bd1464 DNA polymerase III, delta subunit YP_003126130.1 KEGG: sit:TM1040_1688 hypothetical protein YP_003126131.1 KEGG: viral A-type inclusion protein YP_003126132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0829 response regulator receiver protein YP_003126133.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU14430 hypothetical protein YP_003126134.1 KEGG: cak:Caul_2555 hypothetical protein YP_003126135.1 PFAM: carbonic anhydrase; KEGG: carbonic anhydrase family protein; K01672 carbonic anhydrase YP_003126136.1 KEGG: rce:RC1_3325 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003126137.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: asa:ASA_3983 protease II YP_003126138.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_0576 oxidoreductase domain- containing protein YP_003126139.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: bba:Bd0026 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_003126140.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_003126141.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: bba:Bd0024 cytochrome b subunit YP_003126143.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway YP_003126144.1 KEGG: bmv:BMASAVP1_A3445 BadF/BadG/BcrA/BcrD ATPase family protein YP_003126145.1 KEGG: aba:Acid345_2676 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003126146.1 KEGG: sal:Sala_1285 hypothetical protein YP_003126147.1 KEGG: glo:Glov_2126 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; SMART: AAA ATPase YP_003126148.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: ppd:Ppro_1726 GTP-binding protein Era YP_003126151.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: gbm:Gbem_3975 single-strand binding protein YP_003126152.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sus:Acid_3639 TonB-dependent receptor YP_003126155.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_003126156.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mxa:MXAN_5106 peptidase, M20A family YP_003126157.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: dds:Ddes_0190 acetylglutamate kinase YP_003126158.1 PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: mxa:MXAN_5104 N-acetylornithine carbamoyltransferase YP_003126159.1 PFAM: aminotransferase class-III; KEGG: aav:Aave_1164 acetylornithine and succinylornithine aminotransferase YP_003126160.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_003126161.1 KEGG: mxa:MXAN_5108 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; ExsB family protein YP_003126162.1 KEGG: pau:PA14_63350 GNAT family acetyltransferase YP_003126163.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: sus:Acid_1398 coagulation factor 5/8 type domain-containing protein YP_003126164.1 PFAM: oxidoreductase domain protein; KEGG: smt:Smal_3812 oxidoreductase domain protein YP_003126165.1 TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: xca:xccb100_0784 glucose / galactose porter YP_003126166.1 KEGG: sml:Smlt2567 transmembrane transporter YP_003126167.1 PFAM: ROK family protein; KEGG: bcr:BCAH187_A4396 glucokinase YP_003126168.1 PFAM: peptidase T2 asparaginase 2; KEGG: xca:xccb100_1239 exported N(4)-(beta-N- acetylglucosaminyl)-L-asparaginase YP_003126169.1 PFAM: CutC family protein; KEGG: cvi:CV_1414 copper homeostasis protein YP_003126170.1 PFAM: RagB/SusD domain protein YP_003126171.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126172.1 PFAM: FecR protein; KEGG: FecR protein YP_003126173.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: aba:Acid345_1342 sigma-24, ECF subfamily YP_003126175.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; LmbE family protein; KEGG: glucosamine-6-phosphate isomerase family protein YP_003126176.1 KEGG: mxa:MXAN_1364 hypothetical protein YP_003126177.1 TIGRFAM: methyltransferase; KEGG: dal:Dalk_1638 methyltransferase YP_003126178.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aba:Acid345_2686 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003126179.1 KEGG: ppu:PP_1904 UDP-N- acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_003126180.1 KEGG: bsu:BSU15710 primosome assembly protein PriA; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein YP_003126181.1 KEGG: sat:SYN_01275 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003126182.1 KEGG: predicted protein YP_003126183.1 KEGG: bha:BH1351 hypothetical protein; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003126184.1 KEGG: cff:CFF8240_0878 hypothetical protein YP_003126185.1 PFAM: sodium/hydrogen exchanger; KEGG: bha:BH2844 Na+/H+ antiporter YP_003126186.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: hypothetical protein YP_003126187.1 KEGG: sat:SYN_02379 leucyl/phenylalanyl-tRNA-- protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_003126189.1 PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor YP_003126190.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; UspA domain protein; KEGG: sus:Acid_5624 Mn2+/Fe2+ transporter YP_003126191.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: aba:Acid345_3487 transcriptional regulator, LytR/AlgR family YP_003126192.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_5581 signal transduction histidine kinase, LytS YP_003126194.1 KEGG: sus:Acid_5580 transmembrane protein YP_003126195.1 PFAM: lipolytic protein G-D-S-L family; KEGG: smt:Smal_3367 lipolytic protein G-D-S-L family YP_003126196.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: bcy:Bcer98_3277 isocitrate dehydrogenase YP_003126197.1 Converts isocitrate to alpha ketoglutarate YP_003126198.1 PFAM: aldo/keto reductase; KEGG: kpe:KPK_3721 oxidoreductase, aldo/keto reductase family YP_003126199.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003126200.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sat:SYN_00032 cell wall degradation protein YP_003126202.1 PFAM: Heavy metal transport/detoxification protein; KEGG: sfu:Sfum_3223 heavy metal translocating P- type ATPase YP_003126206.1 TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: hypothetical protein YP_003126207.1 catalyzes the interconversion of succinyl-CoA and succinate YP_003126211.1 PFAM: protein of unknown function DUF583; KEGG: pzu:PHZ_c1838 hypothetical protein YP_003126213.1 SMART: hypothetical protein; KEGG: mmw:Mmwyl1_2196 Tol-Pal system YbgF YP_003126214.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: pna:Pnap_2061 glycosyl transferase, family 51 YP_003126215.1 PFAM: peptidase M28; peptidase M20; KEGG: net:Neut_1379 peptidase M28 YP_003126216.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: dal:Dalk_4133 YidC translocase/secretase YP_003126217.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_003126218.1 PFAM: thioesterase superfamily protein; KEGG: aba:Acid345_3253 thioesterase superfamily YP_003126219.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: tmz:Tmz1t_2132 metal dependent phosphohydrolase YP_003126220.1 TIGRFAM: siroheme synthase; KEGG: aba:Acid345_2374 precorrin-2 dehydrogenase YP_003126221.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pmr:PMI2247 siroheme synthase [includes: uroporphyrin-III C-methyltransferase and sirohydrochlorin ferrochelatase] YP_003126222.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: sus:Acid_6431 nitrite/sulfite reductase hemoprotein beta subunit YP_003126223.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: shn:Shewana3_0432 2-deoxyglucose-6- phosphatase YP_003126224.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: sfu:Sfum_2118 ribosomal protein S1 YP_003126225.1 PFAM: rhomboid family protein; KEGG: xcv:XCV2901 rhomboid family membrane protein YP_003126226.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_003126228.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sde:Sde_3733 response regulator receiver domain-containing protein YP_003126229.1 PFAM: histidine kinase internal region; TPR repeat- containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein YP_003126231.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: bcb:BCB4264_A1552 cytidylate kinase YP_003126233.1 KEGG: bba:Bd2548 hypothetical protein YP_003126234.1 KEGG: predicted protein YP_003126235.1 PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: bsu:BSU00860 class III stress response- related ATPase YP_003126236.1 KEGG: kpe:KPK_3564 anti-anti-sigma factor YP_003126237.1 PFAM: beta-lactamase domain protein; KEGG: pmr:PMI0252 ribonuclease Z YP_003126238.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: dihydrodipicolinate synthase YP_003126239.1 KEGG: cbc:CbuK_1738 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit YP_003126241.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: gbe:GbCGDNIH1_2396 ribonuclease BN YP_003126242.1 KEGG: xcv:XCV2118 secreted protein YP_003126243.1 PFAM: acyltransferase 3; KEGG: acyltransferase family protein YP_003126244.1 PFAM: Domain of unknown function DUF1793; KEGG: sus:Acid_2314 glutaminase YP_003126245.1 KEGG: hypothetical protein YP_003126247.1 PFAM: Alg9 family protein mannosyltransferase; KEGG: zmo:ZMO0849 hypothetical protein YP_003126251.1 KEGG: hypothetical protein LOC689787 YP_003126252.1 KEGG: gme:Gmet_0588 hypothetical protein YP_003126253.1 PFAM: semialdehyde dehydrogenase NAD-binding; KEGG: scl:sce2886 hypothetical protein YP_003126254.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pfl:PFL_0765 quinone family NAD(P)H dehydrogenase YP_003126255.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein YP_003126258.1 KEGG: cja:CJA_3707 alkaline phosphatase-like protein YP_003126259.1 KEGG: bcm:Bcenmc03_4333 heat shock protein DnaJ domain-containing protein YP_003126260.1 PFAM: acyltransferase 3; KEGG: acyltransferase family protein YP_003126261.1 KEGG: kpe:KPK_0007 outer membrane protein, OMP85 family YP_003126262.1 PFAM: conserved hypothetical protein; KEGG: bph:Bphy_2031 hypothetical protein YP_003126263.1 PFAM: metallophosphoesterase; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: sus:Acid_4533 pyrrolo-quinoline quinone YP_003126264.1 PFAM: RagB/SusD domain protein YP_003126265.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126266.1 PFAM: FecR protein; KEGG: cak:Caul_0142 anti-FecI sigma factor, FecR YP_003126267.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pmr:PMI3708 ECF-family sigma factor YP_003126268.1 PFAM: protein of unknown function DUF1703; KEGG: lch:Lcho_2330 hypothetical protein YP_003126269.1 PFAM: Luciferase-like monooxygenase; KEGG: mlo:mll2315 alkanal monooxygenase-like protein YP_003126270.1 KEGG: GA16882 gene product from transcript GA16882- RA YP_003126276.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: gur:Gura_3580 antibiotic biosynthesis monooxygenase YP_003126278.1 PFAM: lipolytic protein G-D-S-L family YP_003126279.1 KEGG: hypothetical protein YP_003126280.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region YP_003126281.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003126282.1 PFAM: epoxide hydrolase domain protein; alpha/beta hydrolase; KEGG: acp:A2cp1_1654 epoxide hydrolase domain protein YP_003126284.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pst:PSPTO_1582 short chain dehydrogenase/reductase family oxidoreductase YP_003126286.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126287.1 PFAM: RagB/SusD domain protein YP_003126291.1 PFAM: peptidase M13; peptidase M13 neprilysin; KEGG: saz:Sama_2615 endothelin-converting protein 1 YP_003126295.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: bsu:BSU40760 hypothetical protein YP_003126296.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mxa:MXAN_5274 hypothetical protein YP_003126297.1 PFAM: major facilitator superfamily MFS_1; KEGG: oca:OCAR_7763 major facilitator superfamily MFS_1 YP_003126298.1 KEGG: pin:Ping_3645 GCN5-related N- acetyltransferase YP_003126299.1 PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mmw:Mmwyl1_3949 GntR family transcriptional regulator YP_003126300.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ilo:IL0083 short chain dehydrogenase/reductase family protein YP_003126301.1 PFAM: regulatory protein TetR; KEGG: bja:blr8185 transcriptional regulatory protein YP_003126302.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003126303.1 PFAM: aldo/keto reductase; KEGG: afw:Anae109_2886 aldo/keto reductase YP_003126304.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short chain dehydrogenase (predicted) YP_003126305.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator YP_003126306.1 PFAM: helix-turn-helix HxlR type; KEGG: ppd:Ppro_1109 HxlR family transcriptional regulator YP_003126307.1 KEGG: bca:BCE_1051 hypothetical protein YP_003126308.1 PFAM: alpha/beta hydrolase; KEGG: bja:blr6271 hypothetical protein YP_003126309.1 PFAM: helix-turn-helix HxlR type; KEGG: abb:ABBFA_000744 HxlR-like helix-turn-helix family protein YP_003126310.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: dal:Dalk_0690 Appr-1-p processing domain protein YP_003126311.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mms:mma_2903 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_003126312.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003126313.1 KEGG: scl:sce8374 hypothetical protein YP_003126314.1 PFAM: cyclic nucleotide-binding; KEGG: vha:VIBHAR_00763 hypothetical protein YP_003126315.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: zinc-containing alcohol dehydrogenase (ADH) YP_003126317.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: xcv:XCV1741 hypothetical protein YP_003126318.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bsu:BSU38540 involved in lipoteichoic acid biosynthesis YP_003126319.1 KEGG: rme:Rmet_1925 hypothetical protein YP_003126320.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE0546 TonB-dependent receptor protein YP_003126321.1 KEGG: ccs:CCNA_03020 hypothetical protein YP_003126322.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rme:Rmet_5065 hypothetical protein YP_003126323.1 KEGG: hch:HCH_00727 hypothetical protein YP_003126325.1 PFAM: HPP family protein; KEGG: mgm:Mmc1_0464 HPP family protein+B94 YP_003126326.1 PFAM: aldo/keto reductase; KEGG: bcb:BCB4264_A0222 oxidoreductase, aldo/keto reductase family YP_003126327.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aby:ABAYE0223 transcriptional regulator (AraC-like) YP_003126328.1 KEGG: nmu:Nmul_A0927 phosphoesterase, PA- phosphatase related YP_003126329.1 PFAM: ASPIC/UnbV domain protein; KEGG: sus:Acid_1964 ASPIC/UnbV domain-containing protein YP_003126330.1 KEGG: hypothetical protein YP_003126331.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126332.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein YP_003126333.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: mxa:MXAN_3686 RNA polymerase sigma-70 factor, ECF subfamily YP_003126334.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR YP_003126335.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126336.1 KEGG: hypothetical protein YP_003126337.1 PFAM: glycoside hydrolase family 30; KEGG: cja:CJA_3306 glycoside hydrolase family 30, gly30A YP_003126338.1 PFAM: glycoside hydrolase family 30; KEGG: sus:Acid_2638 glucosylceramidase YP_003126339.1 PFAM: glycoside hydrolase family 16; KEGG: swd:Swoo_4377 glycoside hydrolase family protein YP_003126340.1 KEGG: sde:Sde_2996 endoglucanase-like YP_003126341.1 PFAM: RagB/SusD domain protein YP_003126342.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126343.1 PFAM: FecR protein; KEGG: nwi:Nwi_1339 FecR protein YP_003126344.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: bja:blr3042 RNA polymerase sigma factor YP_003126345.1 PFAM: helix-turn-helix HxlR type; KEGG: bpy:Bphyt_5760 transcriptional regulator, HxlR family YP_003126346.1 KEGG: azc:AZC_1385 hypothetical protein YP_003126348.1 KEGG: competence protein ComEC YP_003126350.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: mmr:Mmar10_3032 major facilitator transporter YP_003126352.1 KEGG: sdn:Sden_1931 helix-turn-helix, AraC type YP_003126353.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: csa:Csal_2376 glyoxalase/bleomycin resistance protein/dioxygenase YP_003126354.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: bba:Bd3766 hypothetical protein YP_003126355.1 KEGG: amc:MADE_00921 BNR/Asp-box repeat protein YP_003126356.1 KEGG: bja:bll7858 hypothetical protein YP_003126357.1 PFAM: aldo/keto reductase; KEGG: ret:RHE_PB00074 aldoketo reductase protein YP_003126358.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ppu:PP_4661 NAD(P)H dehydrogenase (quinone) YP_003126359.1 PFAM: regulatory protein LysR; KEGG: amc:MADE_01219 LysR-family transcriptional regulator YP_003126361.1 PFAM: FecR protein; KEGG: pfl:PFL_4040 sigma factor regulatory protein FecR/PupR family YP_003126362.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ppg:PputGB1_0180 ECF subfamily RNA polymerase sigma-24 factor YP_003126363.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0497 acetyltransferase YP_003126364.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1794 hypothetical protein YP_003126365.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bph:Bphy_4196 metal dependent phosphohydrolase YP_003126366.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hch:HCH_03203 transcriptional regulator YP_003126367.1 PFAM: [2Fe-2S]-binding domain protein; molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; ferredoxin; KEGG: psb:Psyr_1815 ferredoxin:molybdopterin dehydrogenase, FAD-binding:[2Fe-2S]-binding:CO dehydrogenase flavoprotein, C-terminal YP_003126368.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: spe:Spro_2301 xanthine dehydrogenase molybdopterin binding subunit YP_003126369.1 KEGG: dde:Dde_3546 xanthine dehydrogenase accessory factor YP_003126370.1 KEGG: scl:sce4023 uricase; TIGRFAM: urate oxidase; PFAM: Uricase YP_003126371.1 TIGRFAM: allantoinase; PFAM: amidohydrolase; amidohydrolase; KEGG: scl:sce5876 allantoinase YP_003126372.1 KEGG: bja:bll6147 allantoate amidohydrolase; TIGRFAM: amidase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003126373.1 PFAM: cupin; KEGG: hch:HCH_01149 hypothetical protein YP_003126374.1 TIGRFAM: OHCU decarboxylase; KEGG: hch:HCH_01094 OHCU decarboxylase YP_003126375.1 KEGG: cps:CPS_4870 hypothetical protein; TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin; SMART: transthyretin YP_003126376.1 KEGG: mxa:MXAN_6823 hypothetical protein YP_003126377.1 KEGG: ATPase YP_003126378.1 KEGG: aba:Acid345_2907 40-residue YVTN beta- propeller repeat protein YP_003126379.1 PFAM: beta-lactamase; KEGG: sus:Acid_2490 beta-lactamase YP_003126380.1 KEGG: spc:Sputcn32_3591 outer membrane adhesin like protein YP_003126381.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: similar to CG1236-PA YP_003126383.1 PFAM: peptidase S41; SMART: peptidase S41; KEGG: mmr:Mmar10_0061 peptidase S41 YP_003126384.1 PFAM: PEBP family protein; KEGG: rpa:RPA0709 hypothetical protein YP_003126385.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: conserved hypothetical protein, transcriptional regulator (AraC family) YP_003126386.1 KEGG: abu:Abu_1617 hypothetical protein YP_003126387.1 KEGG: pen:PSEEN5228 hypothetical protein YP_003126388.1 KEGG: rme:Rmet_1657 conserved hypothetical protein- transmembrane prediction YP_003126389.1 PFAM: rhomboid family protein; KEGG: hne:HNE_0332 S54 family peptidase YP_003126390.1 KEGG: ban:BA2721 hypothetical protein YP_003126391.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: hch:HCH_03222 hemopexin repeat-containing protein YP_003126393.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein YP_003126394.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR YP_003126395.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: saz:Sama_2611 ECF subfamily RNA polymerase sigma-24 factor YP_003126396.1 KEGG: pmu:PM1083 hypothetical protein YP_003126397.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: maq:Maqu_2134 AraC protein, arabinose- binding/dimerisation YP_003126398.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126399.1 PFAM: RagB/SusD domain protein YP_003126401.1 PFAM: fibronectin type III domain protein; SMART: fibronectin type III domain protein YP_003126402.1 KEGG: cja:CJA_3593 alpha-L-fucosidase, , afc95B YP_003126403.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pzu:PHZ_c2816 short-chain dehydrogenase/reductase SDR YP_003126404.1 KEGG: sew:SeSA_A1319 bacteriophage protein YP_003126406.1 KEGG: aba:Acid345_2503 hypothetical protein YP_003126408.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rle:pRL100274 fucosidase YP_003126410.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126411.1 PFAM: regulatory protein DeoR; hypothetical protein; SMART: regulatory protein DeoR; KEGG: esa:ESA_02953 hypothetical protein YP_003126412.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_003126413.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway YP_003126414.1 PFAM: Na+/solute symporter; KEGG: aba:Acid345_3352 SSS sodium solute transporter superfamily YP_003126415.1 PFAM: glycoside hydrolase family 9; polysaccharide deacetylase; KEGG: cja:CJA_1633 endo-1,4-beta glucanase, , cel9B YP_003126416.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_003126417.1 KEGG: vvy:VV0858 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein YP_003126418.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2651 alpha-1,2-mannosidase family protein YP_003126421.1 KEGG: sdy:SDY_2035 hypothetical protein YP_003126422.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sus:Acid_3482 integral membrane sensor signal transduction histidine kinase YP_003126423.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sat:SYN_01019 two-component response regulator YP_003126424.1 KEGG: sus:Acid_3172 hypothetical protein YP_003126425.1 PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein YP_003126426.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator YP_003126427.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sde:Sde_2646 phosphatidylserine decarboxylase YP_003126428.1 KEGG: sde:Sde_1281 hypothetical protein YP_003126429.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate YP_003126430.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; KEGG: csa:Csal_1735 altronate dehydratase YP_003126431.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: xac:XAC4255 hexuranate transporter YP_003126432.1 PFAM: KDPG and KHG aldolase; KEGG: cak:Caul_1760 keto-hydroxyglutarate- aldolase/keto-deoxy-phosphogluconate aldolase YP_003126433.1 PFAM: PfkB domain protein; KEGG: sus:Acid_2122 ribokinase-like domain- containing protein YP_003126434.1 PFAM: glucuronate isomerase; KEGG: cja:CJA_2772 glucuronate isomerase YP_003126435.1 catalyzes the formation of D-tagaturonate from D-altronate YP_003126436.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_003126437.1 PFAM: protein of unknown function DUF1016; KEGG: apl:APL_1460 hypothetical protein YP_003126438.1 PFAM: Domain of unknown function DUF1801 YP_003126439.1 KEGG: hypothetical protein YP_003126440.1 PFAM: Fmu (Sun) domain protein; KEGG: saz:Sama_1086 Fmu (Sun) YP_003126441.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: rsq:Rsph17025_0076 dihydrolipoamide acetyltransferase YP_003126442.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_003126443.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: nis:NIS_0105 30S ribosomal protein S20 YP_003126444.1 KEGG: spl:Spea_0137 peptidase M14 carboxypeptidase A YP_003126445.1 KEGG: ppd:Ppro_0927 beta-ketoacyl synthase YP_003126446.1 PFAM: beta-ketoacyl synthase; KEGG: scl:sce5922 oxoacyl-(acyl-carrier-protein) synthase II YP_003126447.1 KEGG: pca:Pcar_2651 acyl-carrier protein YP_003126448.1 PFAM: ABC-2 type transporter; KEGG: dps:DP1836 ABC transporter permease YP_003126449.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dps:DP1837 ABC transporter, ATP-binding protein YP_003126450.1 KEGG: dps:DP1838 hypothetical protein YP_003126451.1 KEGG: dar:Daro_2369 hypothetical protein YP_003126452.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_003126453.1 KEGG: plu:plu2163 hypothetical protein YP_003126454.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bpy:Bphyt_7117 methyltransferase type 11 YP_003126455.1 KEGG: asa:ASA_4182 hypothetical protein YP_003126456.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_003126458.1 KEGG: pfo:Pfl01_1212 hypothetical protein YP_003126459.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: dsh:Dshi_2589 ATP-dependent DNA ligase YP_003126460.1 PFAM: regulatory protein AsnC/Lrp family; regulatory protein ArsR; SMART: regulatory protein AsnC/Lrp family; KEGG: vsp:VS_2168 transcriptional regulator, AsnC family YP_003126462.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: psb:Psyr_1838 peptidase U61, LD- carboxypeptidase A YP_003126466.1 PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: psa:PST_2663 ATP-dependent helicase, DEAD box family YP_003126467.1 PFAM: metallophosphoesterase; KEGG: pmy:Pmen_2193 ICC-like phosphoesterase YP_003126468.1 PFAM: histone deacetylase superfamily; KEGG: pcr:Pcryo_2116 histone deacetylase superfamily protein YP_003126470.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; SMART: helix-turn-helix domain protein; KEGG: cha:CHAB381_0248 hypothetical protein YP_003126471.1 KEGG: scl:sce0333 hypothetical protein YP_003126472.1 PFAM: protein of unknown function DUF1648; KEGG: bcr:BCAH187_A4974 conserved membrane protein YvaZ YP_003126473.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sus:Acid_0850 DNA-directed DNA polymerase YP_003126474.1 KEGG: pca:Pcar_1741 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_003126476.1 KEGG: sus:Acid_6982 aspartate kinase III; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003126477.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: sat:SYN_02526 malate/L-lactate dehydrogenase YP_003126478.1 KEGG: mxa:MXAN_6763 hypothetical protein YP_003126479.1 KEGG: hypothetical protein YP_003126480.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126481.1 KEGG: hypothetical protein YP_003126482.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126487.1 PFAM: deoxynucleoside kinase; KEGG: hypothetical protein YP_003126488.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003126489.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: pca:Pcar_2167 glutamyl-tRNA (Gln) amidotransferase, C subunit, GatC-like YP_003126490.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_4199 macrolide efflux ABC transporter, ATP-binding protein YP_003126491.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: hypothetical protein YP_003126492.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VP0978 ABC transporter, ATP-binding protein YP_003126493.1 KEGG: hypothetical protein YP_003126494.1 KEGG: sit:TM1040_1147 enoyl-(acyl carrier protein) reductase YP_003126495.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: swp:swp_1346 DNA repair protein RecN YP_003126496.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: similar to CG8777-PA YP_003126497.1 PFAM: protein of unknown function DUF164; KEGG: nis:NIS_1509 hypothetical protein YP_003126498.1 PFAM: protein of unknown function DUF34; KEGG: hypothetical protein YP_003126499.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mxa:MXAN_5988 thermostable carboxypeptidase 1 YP_003126500.1 PFAM: rhodanese domain protein; thioredoxin domain protein; SMART: rhodanese domain protein; KEGG: dvm:DvMF_2623 rhodanese domain protein YP_003126501.1 KEGG: sil:SPO0571 PKD domain-containing protein; TIGRFAM: conserved repeat domain protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein YP_003126503.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003126505.1 PFAM: RNA methylase; PUA domain containing protein; SMART: PUA domain containing protein; KEGG: glo:Glov_1090 protein of unknown function Met10 YP_003126506.1 PFAM: GrpE protein; KEGG: scl:sce0004 chloroplast GrpE protein YP_003126507.1 KEGG: azo:azo1062 chaperone protein DnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003126508.1 PFAM: methyltransferase type 11; KEGG: cvi:CV_1104 oxidoreductase YP_003126509.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dal:Dalk_0318 von Willebrand factor type A YP_003126510.1 KEGG: hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003126511.1 PFAM: Mannosyl-glycoprotein endo-beta-N- acetylglucosamidase; peptidoglycan-binding LysM; SMART: Lysozyme subfamily 2; peptidoglycan-binding LysM; KEGG: hypothetical protein YP_003126512.1 PFAM: O-methyltransferase family 3; KEGG: mxa:MXAN_5983 O-methyltransferase family protein YP_003126513.1 PFAM: conserved hypothetical protein; KEGG: hypothetical protein YP_003126516.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sus:Acid_3175 hypothetical protein YP_003126517.1 catalyzes branch migration in Holliday junction intermediates YP_003126518.1 KEGG: GK16526 gene product from transcript GK16526- RA; TIGRFAM: citrate (Si)-synthase; PFAM: Citrate synthase YP_003126519.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sat:SYN_00415 permease YP_003126520.1 KEGG: gur:Gura_1716 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase YP_003126521.1 PFAM: glycosyl transferase family 2; KEGG: bsu:BSU04300 hypothetical protein YP_003126522.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: hypothetical protein YP_003126523.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: aba:Acid345_3448 sigma-24, ECF subfamily YP_003126524.1 KEGG: aba:Acid345_3449 hypothetical protein YP_003126527.1 KEGG: mmr:Mmar10_1430 aminopeptidase YP_003126528.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pca:Pcar_2215 tetrapyrrole methylase family protein YP_003126529.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: nis:NIS_0873 phosphoribosylformylglycinamidine synthase, small subunit YP_003126530.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: glo:Glov_2499 CDP-diacylglycerol/serine O- phosphatidyltransferase YP_003126531.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: bcz:BCZK1712 Xaa-Pro aminopeptidase YP_003126532.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_003126533.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: ccv:CCV52592_0799 bifunctional protein FolD YP_003126534.1 KEGG: bmv:BMASAVP1_A2794 hypothetical protein YP_003126535.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein YP_003126536.1 TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (class B); KEGG: hypothetical protein; K01078 acid phosphatase YP_003126537.1 KEGG: ppd:Ppro_0529 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003126538.1 KEGG: bcy:Bcer98_0008 inositol-5-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein YP_003126539.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ppd:Ppro_2037 apolipoprotein N- acyltransferase YP_003126540.1 PFAM: alpha/beta hydrolase; Ndr family protein; KEGG: aba:Acid345_3365 alpha/beta hydrolase YP_003126541.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: shm:Shewmr7_0119 peptidase M6, immune inhibitor A YP_003126542.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: dal:Dalk_2289 PKD domain containing protein YP_003126543.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oxidoreductase, short chain dehydrogenase/reductase family; K00540 YP_003126545.1 KEGG: hch:HCH_03572 BNR/Asp-box repeat-containing protein YP_003126546.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: tbd:Tbd_0909 TonB-dependent receptor YP_003126547.1 KEGG: hypothetical protein YP_003126548.1 KEGG: hypothetical protein YP_003126549.1 KEGG: Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003126550.1 KEGG: sfu:Sfum_0113 3-oxoacyl-(acyl-carrier- protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III YP_003126551.1 KEGG: amc:MADE_00899 sensory box histidine kinase/response regulator YP_003126552.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: aci:ACIAD3176 sensory transduction histidine kinase YP_003126553.1 PFAM: NUDIX hydrolase; KEGG: scl:sce2352 hypothetical protein YP_003126554.1 PFAM: DinB family protein; KEGG: aci:ACIAD2653 hypothetical protein YP_003126555.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase-like protein YP_003126556.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: bsu:BSU15900 acyl-carrier-protein S- malonyltransferase YP_003126558.1 KEGG: aba:Acid345_2208 GTP cyclohydrolase; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I YP_003126559.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: 6-pyruvoyltetrahydropterin synthase, ; K01737 6-pyruvoyl tetrahydrobiopterin synthase YP_003126560.1 PFAM: purine or other phosphorylase family 1; KEGG: gsu:GSU0453 MTA/SAH nucleosidase YP_003126561.1 PFAM: protein of unknown function DUF191; KEGG: afw:Anae109_1615 hypothetical protein YP_003126562.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: FAD binding domain of DNA photolyase family protein; K01669 deoxyribodipyrimidine photo- lyase YP_003126563.1 PFAM: aminotransferase class IV; KEGG: azc:AZC_1597 4-amino-4-deoxychorismate lyase YP_003126564.1 KEGG: sse:Ssed_1452 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_003126565.1 KEGG: spl:Spea_2803 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_003126568.1 KEGG: bca:BCE_3912 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003126569.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; KEGG: GI18319 gene product from transcript GI18319- RA YP_003126570.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: met:M446_6695 lipoprotein YP_003126572.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: bsu:BSU15130 cell division protein MraZ YP_003126573.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bsu:BSU15140 S-adenosyl-methyltransferase MraW YP_003126575.1 KEGG: gme:Gmet_0406 penicillin-binding protein, transpeptidase; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; SMART: PASTA domain containing protein YP_003126576.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_003126577.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_003126578.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: hypothetical protein YP_003126579.1 PFAM: cell cycle protein; KEGG: bha:BH3276 stage V sporulation protein E YP_003126580.1 KEGG: gbm:Gbem_0491 UDP-N-acetylglucosamine--N- acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain YP_003126581.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_003126582.1 KEGG: hypothetical protein YP_003126583.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: mfa:Mfla_2264 cell division protein FtsA YP_003126584.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: mgm:Mmc1_0747 cell division protein FtsZ YP_003126585.1 PFAM: protein of unknown function DUF202; KEGG: afr:AFE_1554 hypothetical protein YP_003126586.1 PFAM: protein of unknown function DUF450; KEGG: pfo:Pfl01_1326 hypothetical protein YP_003126587.1 PFAM: pirin; KEGG: bba:Bd0309 pirin-related protein YP_003126588.1 PFAM: K potassium transporter; KEGG: mlo:mll1417 potassium uptake protein Kup YP_003126589.1 PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat; KEGG: csa:Csal_1798 OmpA/MotB YP_003126590.1 PFAM: polyprenyl synthetase; KEGG: gbm:Gbem_3415 polyprenyl synthetase YP_003126591.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease YP_003126592.1 PFAM: phospholipase/carboxylesterase; KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase YP_003126593.1 PFAM: heat shock protein Hsp90; ATP-binding region ATPase domain protein; KEGG: pca:Pcar_1764 heat shock protein 90 YP_003126594.1 KEGG: mxa:MXAN_6674 lipoprotein YP_003126595.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: sfu:Sfum_3188 ribosomal protein S6 YP_003126596.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: bsu:BSU40890 30S ribosomal protein S18 YP_003126597.1 TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: mxa:MXAN_5080 ribosomal protein L9 YP_003126598.1 KEGG: bra:BRADO2817 hypothetical protein YP_003126599.1 KEGG: nar:Saro_1585 dienelactone hydrolase YP_003126601.1 PFAM: peptidase M19 renal dipeptidase; KEGG: atc:AGR_C_4575 membrane dipeptidase homolog YP_003126602.1 PFAM: alanine racemase; KEGG: sus:Acid_3139 amino acid aldolase or racemase- like protein YP_003126603.1 PFAM: endoribonuclease L-PSP; KEGG: atc:AGR_L_3105 hypothetical protein YP_003126604.1 TIGRFAM: gluconate transporter; PFAM: gluconate transporter; Citrate transporter; KEGG: sde:Sde_1892 high-affinity H+/gluconate symporter YP_003126605.1 PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_4173 ABC transporter, permease protein YP_003126606.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator YP_003126607.1 PFAM: aminoglycoside phosphotransferase; KEGG: pha:PSHAa1968 hypothetical protein YP_003126608.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: glo:Glov_3125 proton-translocating NADH- quinone oxidoreductase, chain N YP_003126609.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); Tachykinin/Neurokinin; KEGG: AGAP012727-PA YP_003126610.1 KEGG: glo:Glov_3127 proton-translocating NADH- quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003126611.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gur:Gura_4234 NADH-ubiquinone oxidoreductase, chain 4L YP_003126612.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ank:AnaeK_4330 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_003126613.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nmu:Nmul_A1020 NADH dehydrogenase subunit I YP_003126614.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: NADH dehydrogenase (quinone); K00337 NADH dehydrogenase I subunit H YP_003126615.1 PFAM: ferredoxin; KEGG: noc:Noc_2559 NADH dehydrogenase subunit G YP_003126616.1 KEGG: mgm:Mmc1_3630 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_003126617.1 KEGG: mgm:Mmc1_3631 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_003126618.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: bba:Bd3085 NADH dehydrogenase I,D subunit YP_003126619.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: gsu:GSU0340 NADH dehydrogenase I, C subunit YP_003126620.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_003126621.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mxa:MXAN_2734 NADH dehydrogenase I, A subunit YP_003126623.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: SLEI family protein YP_003126624.1 KEGG: acp:A2cp1_4148 phosphate binding protein YP_003126627.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: mpo:Mpop_4997 protein tyrosine phosphatase YP_003126628.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_003126631.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: sus:Acid_6757 redoxin domain-containing protein YP_003126632.1 KEGG: sus:Acid_6757 redoxin domain-containing protein YP_003126633.1 KEGG: sus:Acid_5943 phosphoribosylformylglycinamidine synthase subunit I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003126636.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein YP_003126637.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein YP_003126638.1 KEGG: scl:sce6176 methylpurine-DNA glycosylase family protein; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG) YP_003126640.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: sus:Acid_7828 peptidase M14, carboxypeptidase A YP_003126641.1 TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: cak:Caul_2651 amidohydrolase YP_003126642.1 KEGG: sus:Acid_7828 peptidase M14, carboxypeptidase A YP_003126644.1 KEGG: hypothetical protein YP_003126645.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein YP_003126646.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family YP_003126647.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mms:mma_2027 ECF subfamily RNA polymerase sigma factor YP_003126648.1 KEGG: hypothetical protein YP_003126649.1 PFAM: domain of unknown function DUF1731; dTDP-4- dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: pmr:PMI1781 cell division inhibitor, NAD(P)- binding YP_003126650.1 PFAM: chorismate binding-like; KEGG: son:SO_2221 para-aminobenzoate synthase component I YP_003126651.1 KEGG: hypothetical protein YP_003126652.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_003126653.1 KEGG: bcy:Bcer98_3123 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003126654.1 PFAM: phosphoesterase HXTX; KEGG: bca:BCE_1348 hypothetical protein YP_003126655.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_1342 two component transcriptional regulator, winged helix family YP_003126656.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: sus:Acid_4210 alpha-L-fucosidase YP_003126657.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: pat:Patl_0128 glycoside hydrolase family protein YP_003126659.1 KEGG: sat:SYN_01565 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_003126661.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_003126662.1 KEGG: bha:BH0450 hypothetical protein YP_003126663.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hypothetical protein; K01990 ABC-2 type transport system ATP-binding protein YP_003126664.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bcr:BCAH187_A5156 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein YP_003126665.1 KEGG: pen:PSEEN1028 sulfite reductase flavoprotein alpha-component; iron-regulated membrane protein YP_003126666.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gur:Gura_3598 death-on-curing family protein YP_003126667.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: sfu:Sfum_2439 GreA/GreB family elongation factor YP_003126668.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_003126669.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: ank:AnaeK_3478 peptidase U61 LD- carboxypeptidase A YP_003126670.1 KEGG: noc:Noc_2990 hypothetical protein YP_003126671.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ypb:YPTS_0585 UBA/ThiF-type NAD/FAD binding protein YP_003126672.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcz:BCZK4329 phosphate regulon sensor protein YP_003126673.1 PFAM: protein of unknown function DUF179; KEGG: mgm:Mmc1_0726 protein of unknown function DUF179 YP_003126674.1 PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: ccs:CCNA_03558 ATP synthase subunit epsilon YP_003126675.1 KEGG: sal:Sala_2288 F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_003126676.1 KEGG: ade:Adeh_1548 hypothetical protein YP_003126677.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_0769 acetyltransferase YP_003126678.1 KEGG: FAP157; flagellar associated protein YP_003126680.1 KEGG: pau:PA14_60770 outer membrane protein YP_003126681.1 PFAM: protein of unknown function DUF214; KEGG: sus:Acid_4101 hypothetical protein YP_003126682.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: swp:swp_2894 membrane-fusion protein YP_003126683.1 KEGG: mxa:MXAN_3747 hypothetical protein YP_003126684.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: reu:Reut_B5346 PAS YP_003126685.1 KEGG: hch:HCH_01836 heat shock protein HtpX YP_003126686.1 KEGG: dal:Dalk_1998 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003126687.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: mxa:MXAN_2668 pyruvate dehydrogenase complex , E2 component, dihydrolipoamide acetyltransferase YP_003126688.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acp:A2cp1_4043 glyoxalase/bleomycin resistance protein/dioxygenase YP_003126690.1 KEGG: mpo:Mpop_2992 conserved hypothetical protein; transcriptional regulatory protein YP_003126691.1 PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: bha:BH3889 cell-division inhibitor YP_003126692.1 KEGG: tgr:Tgr7_0019 hypothetical protein YP_003126693.1 PFAM: protein of unknown function DUF458; KEGG: bsu:BSU14110 hypothetical protein YP_003126695.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: hypothetical protein; K03978 GTP-binding protein YP_003126696.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: gsu:GSU0867 ubiquinone/menaquinone biosynthesis methyltransferase UbiE YP_003126698.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_003126699.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: GJ18185 gene product from transcript GJ18185- RA YP_003126701.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003126702.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein YP_003126703.1 KEGG: gur:Gura_4031 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003126704.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_003126705.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sus:Acid_4432 ABC transporter related YP_003126706.1 KEGG: sus:Acid_5657 hypothetical protein YP_003126707.1 KEGG: pfl:PFL_6100 lipoprotein YP_003126708.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: net:Neut_2038 TonB-dependent receptor YP_003126710.1 PFAM: protein of unknown function DUF1501; KEGG: bmj:BMULJ_01910 hypothetical protein YP_003126711.1 PFAM: Protein of unknown function DUF1800; KEGG: bmj:BMULJ_01911 hypothetical protein YP_003126712.1 KEGG: aba:Acid345_2470 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003126713.1 PFAM: acyltransferase 3; KEGG: rpt:Rpal_2446 acyltransferase 3 YP_003126715.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; K03564 peroxiredoxin Q/BCP YP_003126717.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: sus:Acid_6757 redoxin domain-containing protein YP_003126718.1 PFAM: thioredoxin domain protein; KEGG: AGAP012940-PA YP_003126719.1 KEGG: amc:MADE_03638 peptide methionine sulfoxide reductase MsrA; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_003126720.1 KEGG: nha:Nham_1128 methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B YP_003126721.1 KEGG: bcn:Bcen_6458 hypothetical protein YP_003126723.1 KEGG: bba:Bd0373 hypothetical protein; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003126724.1 PFAM: OsmC family protein; KEGG: xcv:XCV3060 OsmC-like protein YP_003126725.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: acp:A2cp1_4049 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003126726.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: acr:Acry_1621 dihydrolipoamide dehydrogenase YP_003126727.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: fph:Fphi_0104 threonine aldolase YP_003126728.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: nma:NMA1460 integral membrane protein YP_003126729.1 KEGG: dac:Daci_5718 peptidase S1 and S6 chymotrypsin/Hap YP_003126730.1 KEGG: hypothetical protein YP_003126731.1 KEGG: YALI0C08415p YP_003126732.1 metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain YP_003126733.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator YP_003126736.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU12040 hypothetical protein YP_003126738.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: xcb:XC_1474 RNA polymerase ECF-type sigma factor YP_003126741.1 KEGG: eca:ECA3657 hypothetical protein YP_003126742.1 PFAM: alpha/beta hydrolase; KEGG: bbt:BBta_2505 alpha/beta family hydrolase YP_003126743.1 PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein YP_003126744.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hne:HNE_0950 ABC transporter, ATP-binding protein YP_003126747.1 PFAM: OsmC family protein; KEGG: gox:GOX1992 osmotically inducible protein C YP_003126748.1 PFAM: protein of unknown function DUF1348; KEGG: pat:Patl_1126 hypothetical protein YP_003126749.1 PFAM: regulatory protein TetR; KEGG: scl:sce4859 TetR family transcriptional regulator YP_003126750.1 KEGG: wol:WD0513 hypothetical protein YP_003126751.1 KEGG: cps:CPS_2544 cytochrome P460 YP_003126752.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region YP_003126753.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region YP_003126754.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mmw:Mmwyl1_2547 3-hydroxyisobutyrate dehydrogenase YP_003126755.1 KEGG: pol:Bpro_4930 hypothetical protein YP_003126756.1 PFAM: aldo/keto reductase; KEGG: aba:Acid345_4044 aldo/keto reductase YP_003126757.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain protein; KEGG: hch:HCH_01313 thioredoxin YP_003126758.1 KEGG: smt:Smal_0362 hypothetical protein YP_003126759.1 PFAM: lipase class 3; KEGG: bcr:BCAH187_A5004 lipase family protein YP_003126760.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: pol:Bpro_0515 alkylhydroperoxidase AhpD core YP_003126761.1 PFAM: TROVE domain protein; KEGG: aba:Acid345_2911 hypothetical protein YP_003126765.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: ppd:Ppro_2206 major facilitator transporter YP_003126766.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmn:BMA10247_A0209 MarR family transcriptional regulator YP_003126767.1 PFAM: OsmC family protein; KEGG: aba:Acid345_1947 hypothetical protein YP_003126768.1 member of the NlpC/P60 superfamily of peptidases YP_003126769.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: lpc:LPC_1993 methyltransferase YP_003126771.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: sal:Sala_1018 endonuclease/exonuclease/phosphatase YP_003126772.1 PFAM: DinB family protein; KEGG: sus:Acid_5054 DinB YP_003126774.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: pca:Pcar_2631 von Willebrand factor type A domain-containing protein YP_003126775.1 PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; KEGG: pat:Patl_2797 deoxyribodipyrimidine photolyase-related protein YP_003126776.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: mlo:mll9709 DNA polymerase IV YP_003126777.1 PFAM: RagB/SusD domain protein YP_003126778.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126780.1 KEGG: aba:Acid345_1671 hypothetical protein YP_003126781.1 KEGG: xcv:XCV3219 neuraminidase YP_003126783.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126784.1 PFAM: FecR protein; KEGG: FecR protein YP_003126785.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; regulatory protein LuxR; KEGG: abo:ABO_1639 RNA polymerase sigma factor RpoE YP_003126786.1 PFAM: ferritin Dps family protein; KEGG: apl:APL_1069 ferritin-like protein 1 YP_003126787.1 PFAM: cupin; KEGG: asu:Asuc_1470 cupin 2 domain-containing protein YP_003126788.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein YP_003126789.1 TIGRFAM: sugar transporter; PFAM: ABC transporter substrate-binding protein; major facilitator superfamily MFS_1; KEGG: sus:Acid_5028 sugar transporter YP_003126790.1 KEGG: bur:Bcep18194_B0526 hypothetical protein YP_003126791.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein YP_003126792.1 PFAM: aldo/keto reductase; KEGG: aba:Acid345_2253 aldo/keto reductase YP_003126793.1 KEGG: cja:CJA_3593 alpha-L-fucosidase, , afc95B YP_003126794.1 PFAM: glycoside hydrolase family 39; KEGG: acr:Acry_3134 glycoside hydrolase family protein YP_003126796.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1106 AraC family transcriptional regulator YP_003126798.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pna:Pnap_0164 ABC transporter related YP_003126799.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A2001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003126800.1 PFAM: exonuclease VII large subunit; KEGG: pcr:Pcryo_1091 exodeoxyribonuclease VII large subunit YP_003126801.1 PFAM: exonuclease VII small subunit; KEGG: scl:sce5400 exodeoxyribonuclease VII small subunit YP_003126802.1 PFAM: outer membrane efflux protein; KEGG: aba:Acid345_0447 outer membrane efflux protein YP_003126803.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sus:Acid_6454 RND family efflux transporter MFP subunit YP_003126804.1 PFAM: protein of unknown function DUF190; KEGG: sus:Acid_6456 hypothetical protein YP_003126805.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sus:Acid_6455 CzcA family heavy metal efflux protein YP_003126807.1 KEGG: dal:Dalk_5101 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; CheB methylesterase; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; PAC repeat- containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein YP_003126808.1 PFAM: GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: GAF domain protein; KEGG: met:M446_2206 GAF sensor signal transduction histidine kinase YP_003126809.1 PFAM: Haem oxygenase-like; KEGG: ppw:PputW619_1720 heme oxygenase YP_003126810.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sfu:Sfum_2731 response regulator receiver protein YP_003126811.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: scl:sce0169 peptidase YP_003126812.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mrd:Mrad2831_5128 glutamate--ammonia ligase YP_003126813.1 KEGG: swd:Swoo_0198 hypothetical protein YP_003126814.1 KEGG: rpd:RPD_3003 outer membrane autotransporter barrel YP_003126818.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: prw:PsycPRwf_1506 TonB-dependent receptor YP_003126820.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pca:Pcar_0195 outer membrane receptor for ferrienterochelin and colicins YP_003126822.1 PFAM: haemin-degrading protein; KEGG: mfa:Mfla_1604 hemin-degrading YP_003126823.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_3336 ABC-type hemin transporter, ATP- binding protein YP_003126824.1 PFAM: transport system permease protein; KEGG: ret:RHE_CH03270 hemin transport system, permease protein YP_003126825.1 PFAM: periplasmic binding protein; KEGG: hch:HCH_05461 ABC-type hemin transport system, periplasmic component YP_003126828.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein YP_003126829.1 PFAM: FecR protein; KEGG: rpa:RPA3281 FecR, iron siderophore sensor protein YP_003126830.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: cja:CJA_2681 RNA polymerase sigma factor, sigma-70 family YP_003126831.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_003126832.1 PFAM: protein of unknown function DUF1486; KEGG: scl:sce1212 hypothetical protein YP_003126833.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_3381 hypothetical protein YP_003126834.1 PFAM: RagB/SusD domain protein YP_003126835.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126836.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor YP_003126837.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pat:Patl_1332 RNA polymerase sigma factor YP_003126838.1 PFAM: protein of unknown function DUF558; KEGG: sde:Sde_0467 PAS/PAC sensor signal transduction histidine kinase YP_003126839.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bba:Bd2342 mate efflux family protein YP_003126840.1 KEGG: bcy:Bcer98_4008 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase YP_003126841.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_003126844.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP YP_003126845.1 PFAM: protein of unknown function DUF1080; KEGG: sus:Acid_6142 hypothetical protein YP_003126846.1 TIGRFAM: inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: bha:BH1532 purine nucleoside phosphorylase YP_003126847.1 PFAM: helix-turn-helix HxlR type; KEGG: dvl:Dvul_0808 HxlR family transcriptional regulator YP_003126848.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1016 short-chain dehydrogenase/reductase SDR YP_003126849.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: scl:sce2028 hypothetical protein YP_003126850.1 TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: ATP synthase F1, gamma subunit; K02115 F-type H+-transporting ATPase subunit gamma YP_003126851.1 PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein YP_003126852.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pnu:Pnuc_1630 PfpI family intracellular peptidase YP_003126853.1 PFAM: RagB/SusD domain protein YP_003126854.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126855.1 PFAM: protein of unknown function DUF1080; KEGG: pzu:PHZ_c2159 hypothetical protein YP_003126856.1 PFAM: protein of unknown function DUF885; KEGG: pha:PSHAb0514 lipoprotein, ounterparts found in phytopathogens YP_003126857.1 KEGG: sus:Acid_1335 hypothetical protein YP_003126858.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein YP_003126859.1 PFAM: protein of unknown function DUF81; KEGG: gox:GOX0571 hypothetical protein YP_003126861.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: gbm:Gbem_1823 type I phosphodiesterase/nucleotide pyrophosphatase YP_003126862.1 KEGG: nha:Nham_0985 hypothetical protein YP_003126863.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_003126864.1 PFAM: UbiA prenyltransferase; KEGG: nha:Nham_0986 UbiA prenyltransferase YP_003126865.1 PFAM: TatD-related deoxyribonuclease; KEGG: nha:Nham_0991 TatD-related deoxyribonuclease YP_003126866.1 KEGG: nha:Nham_0987 hypothetical protein YP_003126868.1 PFAM: ribosomal protein L7/L12; KEGG: hypothetical protein YP_003126870.1 PFAM: RagB/SusD domain protein YP_003126871.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor YP_003126872.1 similar to release factor 1 and 2 YP_003126873.1 PFAM: protein of unknown function UPF0027; KEGG: pca:Pcar_2835 hypothetical protein YP_003126874.1 KEGG: sde:Sde_1678 hypothetical protein YP_003126875.1 PFAM: PKD domain containing protein; cytochrome C class I; SMART: PKD domain containing protein; KEGG: sde:Sde_0722 Crp/Fnr family transcriptional regulator YP_003126876.1 KEGG: sde:Sde_0722 Crp/Fnr family transcriptional regulator YP_003126877.1 PFAM: protein of unknown function DUF1080; KEGG: swd:Swoo_0366 hypothetical protein YP_003126878.1 PFAM: cytochrome C class I; KEGG: dar:Daro_0692 cytochrome C, class I YP_003126879.1 PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: smd:Smed_2788 xylose isomerase domain protein TIM barrel YP_003126880.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: swd:Swoo_0362 oxidoreductase domain- containing protein YP_003126881.1 PFAM: glycosyl transferase family 2; KEGG: dal:Dalk_0845 glycosyl transferase family 2 YP_003126882.1 KEGG: afw:Anae109_1817 hypothetical protein YP_003126883.1 KEGG: bcb:BCB4264_A4425 hypothetical cytosolic protein YP_003126884.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; KEGG: gur:Gura_1794 preprotein translocase subunit SecA YP_003126885.1 KEGG: bce:BC1820 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase YP_003126886.1 PFAM: sporulation domain protein YP_003126887.1 KEGG: rpc:RPC_1729 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003126889.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vpa:VPA0034 GntR family transcriptional regulator YP_003126891.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abu:Abu_1851 ABC transporter, ATP-binding protein YP_003126893.1 PFAM: glycine hydroxymethyltransferase; KEGG: glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase YP_003126894.1 PFAM: Nucleotidyl transferase; KEGG: pca:Pcar_0276 glucose-1-phosphate thymidylyltransferase YP_003126895.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: oxidoreductase, 2-nitropropane dioxygenase family protein; K02371 enoyl- YP_003126896.1 KEGG: aba:Acid345_4513 hypothetical protein YP_003126897.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_4512 ABC transporter, ATPase subunit YP_003126898.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein YP_003126899.1 PFAM: histidine kinase internal region; KEGG: sde:Sde_3001 DEAD/DEAH box helicase-like YP_003126900.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: dde:Dde_2466 hypothetical protein