-- dump date 20140619_031008 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003119711.1 256419058 8363497 126..1559 1 NC_013132.1 KEGG: bsu:BSU00010 chromosomal replication initiation protein; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 1559 8363497 Cpin_0001 Chitinophaga pinensis DSM 2588 chromosomal replication initiator protein DnaA YP_003119711.1 126 D 485918 CDS YP_003119712.1 256419059 8356099 1698..2234 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rme:Rmet_1648 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit 2234 8356099 Cpin_0002 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003119712.1 1698 D 485918 CDS YP_003119713.1 256419060 8356100 2714..3670 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 3670 8356100 Cpin_0003 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003119713.1 2714 D 485918 CDS YP_003119714.1 256419061 8356101 3910..7302 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7302 8356101 Cpin_0004 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003119714.1 3910 D 485918 CDS YP_003119715.1 256419062 8356102 7325..8839 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8839 8356102 Cpin_0005 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003119715.1 7325 D 485918 CDS YP_003119716.1 256419063 8356103 9027..10859 1 NC_013132.1 PFAM: alkaline phosphatase; SMART: alkaline phosphatase; KEGG: bat:BAS4244 alkaline phosphatase; alkaline phosphatase 10859 8356103 Cpin_0006 Chitinophaga pinensis DSM 2588 alkaline phosphatase YP_003119716.1 9027 D 485918 CDS YP_003119717.1 256419064 8356104 complement(10958..11773) 1 NC_013132.1 KEGG: bpl:BURPS1106A_0120 hypothetical protein; hypothetical protein 11773 8356104 Cpin_0007 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119717.1 10958 R 485918 CDS YP_003119718.1 256419065 8356105 complement(11763..12794) 1 NC_013132.1 KEGG: bur:Bcep18194_A4796 hypothetical protein; hypothetical protein 12794 8356105 Cpin_0008 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119718.1 11763 R 485918 CDS YP_003119719.1 256419066 8356106 complement(12971..14029) 1 NC_013132.1 KEGG: glo:Glov_0004 DNA gyrase, B subunit; type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit-like protein 14029 8356106 Cpin_0009 Chitinophaga pinensis DSM 2588 type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit-like protein YP_003119719.1 12971 R 485918 CDS YP_003119720.1 256419067 8356107 complement(14069..14728) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: swd:Swoo_3747 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 14728 8356107 Cpin_0010 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003119720.1 14069 R 485918 CDS YP_003119721.1 256419068 8356108 complement(14721..15506) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: vvu:VV1_2240 sensor histidine kinase; histidine kinase 15506 8356108 Cpin_0011 Chitinophaga pinensis DSM 2588 histidine kinase YP_003119721.1 14721 R 485918 CDS YP_003119722.1 256419069 8356109 complement(15461..16135) 1 NC_013132.1 KEGG: Hypothetical protein CBG11609; hypothetical protein 16135 8356109 Cpin_0012 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119722.1 15461 R 485918 CDS YP_003119723.1 256419070 8356110 complement(16142..16726) 1 NC_013132.1 hypothetical protein 16726 8356110 Cpin_0013 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119723.1 16142 R 485918 CDS YP_003119724.1 256419071 8356111 16975..18066 1 NC_013132.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: hch:HCH_03616 hypothetical protein; peptidase C14 caspase catalytic subunit p20 18066 8356111 Cpin_0014 Chitinophaga pinensis DSM 2588 peptidase C14 caspase catalytic subunit p20 YP_003119724.1 16975 D 485918 CDS YP_003119725.1 256419072 8356112 18056..19609 1 NC_013132.1 KEGG: sfr:Sfri_4012 hypothetical protein; hypothetical protein 19609 8356112 Cpin_0015 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119725.1 18056 D 485918 CDS YP_003119726.1 256419073 8356113 19620..20486 1 NC_013132.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: gsu:GSU0716 hypothetical protein; peptidase C14 caspase catalytic subunit p20 20486 8356113 Cpin_0016 Chitinophaga pinensis DSM 2588 peptidase C14 caspase catalytic subunit p20 YP_003119726.1 19620 D 485918 CDS YP_003119727.1 256419074 8356114 complement(20571..22211) 1 NC_013132.1 PFAM: peptidase M28; KEGG: pat:Patl_2954 peptidase M28; peptidase M28 22211 8356114 Cpin_0017 Chitinophaga pinensis DSM 2588 peptidase M28 YP_003119727.1 20571 R 485918 CDS YP_003119728.1 256419075 8356115 22332..23375 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gur:Gura_4039 helix-turn-helix domain- containing protein; helix-turn-helix domain-containing protein 23375 8356115 Cpin_0018 Chitinophaga pinensis DSM 2588 helix-turn-helix domain-containing protein YP_003119728.1 22332 D 485918 CDS YP_003119729.1 256419076 8356116 23557..23724 1 NC_013132.1 hypothetical protein 23724 8356116 Cpin_0019 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119729.1 23557 D 485918 CDS YP_003119730.1 256419077 8356117 complement(23772..25049) 1 NC_013132.1 KEGG: mxa:MXAN_3914 PepSY-associated TM helix domain protein; hypothetical protein 25049 8356117 Cpin_0020 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119730.1 23772 R 485918 CDS YP_003119731.1 256419078 8356118 25267..26271 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bac:BamMC406_5929 two component AraC family transcriptional regulator; AraC family transcriptional regulator 26271 8356118 Cpin_0021 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003119731.1 25267 D 485918 CDS YP_003119732.1 256419079 8356119 26569..28398 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein; glycoside hydrolase 28398 8356119 Cpin_0022 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003119732.1 26569 D 485918 CDS YP_003119733.1 256419080 8356120 complement(28422..28760) 1 NC_013132.1 hypothetical protein 28760 8356120 Cpin_0023 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119733.1 28422 R 485918 CDS YP_003119734.1 256419081 8356121 complement(28887..29225) 1 NC_013132.1 hypothetical protein 29225 8356121 Cpin_0024 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119734.1 28887 R 485918 CDS YP_003119735.1 256419082 8356122 29511..32027 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 32027 8356122 Cpin_0025 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003119735.1 29511 D 485918 CDS YP_003119736.1 256419083 8356123 32185..32325 1 NC_013132.1 hypothetical protein 32325 8356123 Cpin_0026 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119736.1 32185 D 485918 CDS YP_003119737.1 256419084 8356124 32462..32851 1 NC_013132.1 KEGG: sde:Sde_0211 hypothetical protein; hypothetical protein 32851 8356124 Cpin_0027 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119737.1 32462 D 485918 CDS YP_003119738.1 256419085 8356125 32856..33431 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 33431 8356125 Cpin_0028 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119738.1 32856 D 485918 CDS YP_003119739.1 256419086 8356126 33443..34438 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 34438 8356126 Cpin_0029 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119739.1 33443 D 485918 CDS YP_003119740.1 256419087 8356127 complement(34570..35058) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gbm:Gbem_3412 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 35058 8356127 Cpin_0030 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003119740.1 34570 R 485918 CDS YP_003119741.1 256419088 8356128 complement(35061..38162) 1 NC_013132.1 KEGG: aba:Acid345_0991 hypothetical protein; protoporphyrinogen oxidase-like protein 38162 8356128 Cpin_0031 Chitinophaga pinensis DSM 2588 protoporphyrinogen oxidase-like protein YP_003119741.1 35061 R 485918 CDS YP_003119742.1 256419089 8356129 complement(38269..39789) 1 NC_013132.1 hypothetical protein 39789 8356129 Cpin_0032 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119742.1 38269 R 485918 CDS YP_003119743.1 256419090 8356132 41299..41649 1 NC_013132.1 KEGG: zgc:162180; hypothetical protein 41649 8356132 Cpin_0035 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119743.1 41299 D 485918 CDS YP_003119744.1 256419091 8356133 42406..42672 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: lpn:lpg2565 transposase ORF-A, IS-type; transposase IS3/IS911 family protein 42672 8356133 Cpin_0036 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003119744.1 42406 D 485918 CDS YP_003119745.1 256419092 8356134 43039..44586 1 NC_013132.1 PFAM: integrase catalytic region; KEGG: oan:Oant_0706 integrase catalytic region; integrase catalytic subunit 44586 8356134 Cpin_0037 Chitinophaga pinensis DSM 2588 integrase catalytic subunit YP_003119745.1 43039 D 485918 CDS YP_003119746.1 256419093 8356135 44607..45347 1 NC_013132.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: shn:Shewana3_1251 IstB ATP binding domain- containing protein; IstB domain-containing protein ATP-binding protein 45347 8356135 Cpin_0038 Chitinophaga pinensis DSM 2588 IstB domain-containing protein ATP-binding protein YP_003119746.1 44607 D 485918 CDS YP_003119747.1 256419094 8356136 complement(45532..45864) 1 NC_013132.1 hypothetical protein 45864 8356136 Cpin_0039 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119747.1 45532 R 485918 CDS YP_003119748.1 256419095 8356138 complement(46603..49251) 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 49251 8356138 Cpin_0041 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003119748.1 46603 R 485918 CDS YP_003119749.1 256419096 8356139 complement(49354..50772) 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 50772 8356139 Cpin_0042 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003119749.1 49354 R 485918 CDS YP_003119750.1 256419097 8356140 complement(50784..54053) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 54053 8356140 Cpin_0043 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003119750.1 50784 R 485918 CDS YP_003119751.1 256419098 8356141 54437..54988 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bbt:BBta_3011 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 54988 8356141 Cpin_0044 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003119751.1 54437 D 485918 CDS YP_003119752.1 256419099 8356142 55025..56155 1 NC_013132.1 PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 56155 8356142 Cpin_0045 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003119752.1 55025 D 485918 CDS YP_003119753.1 256419100 8356143 56152..56742 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sde:Sde_1442 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit 56742 8356143 Cpin_0046 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003119753.1 56152 D 485918 CDS YP_003119754.1 256419101 8356144 56785..57780 1 NC_013132.1 AraC family transcriptional regulator 57780 8356144 Cpin_0047 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003119754.1 56785 D 485918 CDS YP_003119755.1 256419102 8356145 complement(57767..58258) 1 NC_013132.1 KEGG: cvi:CV_2753 disulphide-isomerase; hypothetical protein 58258 8356145 Cpin_0048 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119755.1 57767 R 485918 CDS YP_003119756.1 256419103 8356146 58413..59885 1 NC_013132.1 KEGG: cbs:COXBURSA331_A2031 hypothetical protein; hypothetical protein 59885 8356146 Cpin_0049 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119756.1 58413 D 485918 CDS YP_003119757.1 256419104 8356147 59934..60914 1 NC_013132.1 hypothetical protein 60914 8356147 Cpin_0050 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119757.1 59934 D 485918 CDS YP_003119758.1 256419105 8356148 complement(60963..61529) 1 NC_013132.1 hypothetical protein 61529 8356148 Cpin_0051 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119758.1 60963 R 485918 CDS YP_003119759.1 256419106 8356149 62333..63127 1 NC_013132.1 hypothetical protein 63127 8356149 Cpin_0052 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119759.1 62333 D 485918 CDS YP_003119760.1 256419107 8356150 complement(62994..64448) 1 NC_013132.1 hypothetical protein 64448 8356150 Cpin_0053 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119760.1 62994 R 485918 CDS YP_003119761.1 256419108 8356151 64866..66791 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 66791 8356151 Cpin_0054 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003119761.1 64866 D 485918 CDS YP_003119762.1 256419109 8356152 complement(66785..67132) 1 NC_013132.1 hypothetical protein 67132 8356152 Cpin_0055 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119762.1 66785 R 485918 CDS YP_003119763.1 256419110 8356153 complement(67214..68575) 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 68575 8356153 Cpin_0056 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003119763.1 67214 R 485918 CDS YP_003119764.1 256419111 8356154 complement(68586..71630) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 71630 8356154 Cpin_0057 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003119764.1 68586 R 485918 CDS YP_003119765.1 256419112 8356155 71777..72325 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 72325 8356155 Cpin_0058 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003119765.1 71777 D 485918 CDS YP_003119766.1 256419113 8356156 72396..73538 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN0275 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 73538 8356156 Cpin_0059 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003119766.1 72396 D 485918 CDS YP_003119767.1 256419114 8356157 73551..74540 1 NC_013132.1 KEGG: bpy:Bphyt_0079 transcriptional regulator, AraC family; AraC family transcriptional regulator 74540 8356157 Cpin_0060 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003119767.1 73551 D 485918 CDS YP_003119768.1 256419115 8356158 74590..77295 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein; glycoside hydrolase 77295 8356158 Cpin_0061 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003119768.1 74590 D 485918 CDS YP_003119769.1 256419116 8356159 77417..77956 1 NC_013132.1 hypothetical protein 77956 8356159 Cpin_0062 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119769.1 77417 D 485918 CDS YP_003119770.1 256419117 8356160 78150..79151 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_2513 transcriptional regulator, AraC family; AraC family transcriptional regulator 79151 8356160 Cpin_0063 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003119770.1 78150 D 485918 CDS YP_003119771.1 256419118 8356161 79330..80979 1 NC_013132.1 KEGG: aba:Acid345_0991 hypothetical protein; hypothetical protein 80979 8356161 Cpin_0064 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119771.1 79330 D 485918 CDS YP_003119772.1 256419119 8356162 81398..82597 1 NC_013132.1 hypothetical protein 82597 8356162 Cpin_0065 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119772.1 81398 D 485918 CDS YP_003119773.1 256419120 8356163 complement(82615..83859) 1 NC_013132.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: sat:SYN_01929 ATP-dependent RNA helicase; DEAD/DEAH box helicase 83859 8356163 Cpin_0066 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003119773.1 82615 R 485918 CDS YP_003119774.1 256419121 8356164 83951..84619 1 NC_013132.1 PFAM: protein of unknown function DUF1345; KEGG: msl:Msil_0817 protein of unknown function DUF1345; hypothetical protein 84619 8356164 Cpin_0067 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119774.1 83951 D 485918 CDS YP_003119775.1 256419122 8356165 complement(84698..85657) 1 NC_013132.1 SMART: HTTM domain protein; KEGG: scl:sce8450 hypothetical protein; HTTM domain-containing protein 85657 8356165 Cpin_0068 Chitinophaga pinensis DSM 2588 HTTM domain-containing protein YP_003119775.1 84698 R 485918 CDS YP_003119776.1 256419123 8356166 complement(85669..86157) 1 NC_013132.1 KEGG: scl:sce8449 hypothetical protein; hypothetical protein 86157 8356166 Cpin_0069 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119776.1 85669 R 485918 CDS YP_003119777.1 256419124 8356167 complement(86314..87147) 1 NC_013132.1 hypothetical protein 87147 8356167 Cpin_0070 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119777.1 86314 R 485918 CDS YP_003119778.1 256419125 8356168 complement(87328..87567) 1 NC_013132.1 hypothetical protein 87567 8356168 Cpin_0071 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119778.1 87328 R 485918 CDS YP_003119779.1 256419126 8356169 complement(87642..87908) 1 NC_013132.1 hypothetical protein 87908 8356169 Cpin_0072 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119779.1 87642 R 485918 CDS YP_003119780.1 256419127 8356170 88100..88777 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_7192 hydrolase, NUDIX family; NUDIX hydrolase 88777 8356170 Cpin_0073 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003119780.1 88100 D 485918 CDS YP_003119781.1 256419128 8356171 88783..89331 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: efe:EFER_3009 hypothetical protein; hypothetical protein 89331 8356171 Cpin_0074 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119781.1 88783 D 485918 CDS YP_003119782.1 256419129 8356172 89333..89875 1 NC_013132.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: cvi:CV_2425 hypothetical protein; phosphotransferase KptA/Tpt1 89875 8356172 Cpin_0075 Chitinophaga pinensis DSM 2588 phosphotransferase KptA/Tpt1 YP_003119782.1 89333 D 485918 CDS YP_003119783.1 256419130 8356173 89881..90810 1 NC_013132.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: hch:HCH_07000 ADP-ribosylglycohydrolase; ADP-ribosylation/crystallin J1 90810 8356173 Cpin_0076 Chitinophaga pinensis DSM 2588 ADP-ribosylation/crystallin J1 YP_003119783.1 89881 D 485918 CDS YP_003119784.1 256419131 8356174 90811..91542 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: dol:Dole_0345 metallophosphoesterase; metallophosphoesterase 91542 8356174 Cpin_0077 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003119784.1 90811 D 485918 CDS YP_003119785.1 256419132 8356175 complement(91539..92192) 1 NC_013132.1 hypothetical protein 92192 8356175 Cpin_0078 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119785.1 91539 R 485918 CDS YP_003119786.1 256419133 8356176 92363..94615 1 NC_013132.1 KEGG: bha:BH0494 exopolygalacturonate lyase; TIGRFAM: cell wall/surface repeat protein; PFAM: carbohydrate-binding protein; cell wall/surface repeat-containing protein 94615 8356176 Cpin_0079 Chitinophaga pinensis DSM 2588 cell wall/surface repeat-containing protein YP_003119786.1 92363 D 485918 CDS YP_003119787.1 256419134 8356177 complement(94753..95724) 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein 95724 8356177 Cpin_0080 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119787.1 94753 R 485918 CDS YP_003119788.1 256419135 8356178 95876..97459 1 NC_013132.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cak:Caul_1379 L-amino-acid oxidase; L-amino-acid oxidase 97459 8356178 Cpin_0081 Chitinophaga pinensis DSM 2588 L-amino-acid oxidase YP_003119788.1 95876 D 485918 CDS YP_003119789.1 256419136 8356179 97495..98667 1 NC_013132.1 PFAM: aminotransferase class I and II; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: amc:MADE_01039 histidinol-phosphate aminotransferase; class I and II aminotransferase 98667 8356179 Cpin_0082 Chitinophaga pinensis DSM 2588 class I and II aminotransferase YP_003119789.1 97495 D 485918 CDS YP_003119790.1 256419137 8356180 98680..99663 1 NC_013132.1 SMART: Hedgehog/intein hint domain protein; KEGG: shha; sonic hedgehog a; K06224 hedgehog; Hedgehog/intein hint domain-containing protein 99663 8356180 Cpin_0083 Chitinophaga pinensis DSM 2588 Hedgehog/intein hint domain-containing protein YP_003119790.1 98680 D 485918 CDS YP_003119791.1 256419138 8356181 complement(99721..101799) 1 NC_013132.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: gsu:GSU2860 elongation factor G; translation elongation factor G 101799 8356181 Cpin_0084 Chitinophaga pinensis DSM 2588 translation elongation factor G YP_003119791.1 99721 R 485918 CDS YP_003119792.1 256419139 8356182 complement(102313..103176) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bcm:Bcenmc03_6416 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 103176 8356182 Cpin_0085 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003119792.1 102313 R 485918 CDS YP_003119793.1 256419140 8356183 complement(103462..104616) 1 NC_013132.1 KEGG: sus:Acid_4530 hypothetical protein; hypothetical protein 104616 8356183 Cpin_0086 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119793.1 103462 R 485918 CDS YP_003119794.1 256419141 8356184 104684..105508 1 NC_013132.1 hypothetical protein 105508 8356184 Cpin_0087 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119794.1 104684 D 485918 CDS YP_003119795.1 256419142 8356185 105837..106751 1 NC_013132.1 KEGG: mxa:MXAN_7234 hypothetical protein; hypothetical protein 106751 8356185 Cpin_0088 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119795.1 105837 D 485918 CDS YP_003119796.1 256419143 8356186 complement(106979..109012) 1 NC_013132.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_6519 hypothetical protein; hypothetical protein 109012 8356186 Cpin_0089 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119796.1 106979 R 485918 CDS YP_003119797.1 256419144 8356187 complement(109177..109734) 1 NC_013132.1 KEGG: mxa:MXAN_6539 extracellular protease domain protein; hypothetical protein 109734 8356187 Cpin_0090 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119797.1 109177 R 485918 CDS YP_003119798.1 256419145 8356188 complement(109963..110160) 1 NC_013132.1 hypothetical protein 110160 8356188 Cpin_0091 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119798.1 109963 R 485918 CDS YP_003119799.1 256419146 8356189 110267..110995 1 NC_013132.1 KEGG: ccr:CC_0554 hypothetical protein; hypothetical protein 110995 8356189 Cpin_0092 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119799.1 110267 D 485918 CDS YP_003119800.1 256419147 8356190 111040..113235 1 NC_013132.1 KEGG: mxa:MXAN_3891 group II decarboxylase family protein; group II decarboxylase family protein 113235 8356190 Cpin_0093 Chitinophaga pinensis DSM 2588 group II decarboxylase family protein YP_003119800.1 111040 D 485918 CDS YP_003119801.1 256419148 8356192 complement(113747..116581) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 116581 8356192 Cpin_0095 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119801.1 113747 R 485918 CDS YP_003119802.1 256419149 8356193 116800..117090 1 NC_013132.1 hypothetical protein 117090 8356193 Cpin_0096 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119802.1 116800 D 485918 CDS YP_003119803.1 256419150 8356194 complement(117171..117821) 1 NC_013132.1 PFAM: protein of unknown function DUF1349; KEGG: hypothetical protein; hypothetical protein 117821 8356194 Cpin_0097 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119803.1 117171 R 485918 CDS YP_003119804.1 256419151 8356195 117936..118697 1 NC_013132.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: aba:Acid345_1691 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 118697 8356195 Cpin_0098 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003119804.1 117936 D 485918 CDS YP_003119805.1 256419152 8356196 118800..119306 1 NC_013132.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 119306 8356196 Cpin_0099 Chitinophaga pinensis DSM 2588 methionine sulfoxide reductase A YP_003119805.1 118800 D 485918 CDS YP_003119806.1 256419153 8356197 119379..119909 1 NC_013132.1 KEGG: sus:Acid_2325 hypothetical protein; hypothetical protein 119909 8356197 Cpin_0100 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119806.1 119379 D 485918 CDS YP_003119807.1 256419154 8356198 120134..124714 1 NC_013132.1 KEGG: psb:Psyr_1263 ATPas; hypothetical protein 124714 8356198 Cpin_0101 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119807.1 120134 D 485918 CDS YP_003119808.1 256419155 8356199 complement(124844..125017) 1 NC_013132.1 hypothetical protein 125017 8356199 Cpin_0102 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119808.1 124844 R 485918 CDS YP_003119809.1 256419156 8356202 complement(126251..127882) 1 NC_013132.1 PFAM: SMC domain protein; KEGG: vfi:VF_1128 hypothetical protein; SMC domain-containing protein 127882 8356202 Cpin_0105 Chitinophaga pinensis DSM 2588 SMC domain-containing protein YP_003119809.1 126251 R 485918 CDS YP_003119810.1 256419157 8356205 128386..130833 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sus:Acid_4901 glycoside hydrolase family protein; beta-galactosidase 130833 8356205 Cpin_0106 Chitinophaga pinensis DSM 2588 beta-galactosidase YP_003119810.1 128386 D 485918 CDS YP_003119811.1 256419158 8356206 complement(131026..131751) 1 NC_013132.1 PFAM: protein of unknown function DUF1275; KEGG: pna:Pnap_0124 protein of unknown function DUF1275; hypothetical protein 131751 8356206 Cpin_0107 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119811.1 131026 R 485918 CDS YP_003119812.1 256419159 8356207 131798..134281 1 NC_013132.1 KEGG: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 134281 8356207 Cpin_0108 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003119812.1 131798 D 485918 CDS YP_003119813.1 256419160 8356208 134350..135579 1 NC_013132.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd0395 Bcr/CflA subfamily drug resistance transporter; Bcr/CflA subfamily drug resistance transporter 135579 8356208 Cpin_0109 Chitinophaga pinensis DSM 2588 Bcr/CflA subfamily drug resistance transporter YP_003119813.1 134350 D 485918 CDS YP_003119814.1 256419161 8356209 135620..136420 1 NC_013132.1 hypothetical protein 136420 8356209 Cpin_0110 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119814.1 135620 D 485918 CDS YP_003119815.1 256419162 8356210 136489..137550 1 NC_013132.1 PFAM: phosphoribosylglycinamide synthetase; KEGG: hypothetical protein; phosphoribosylglycinamide synthetase 137550 8356210 Cpin_0111 Chitinophaga pinensis DSM 2588 phosphoribosylglycinamide synthetase YP_003119815.1 136489 D 485918 CDS YP_003119816.1 256419163 8356211 complement(137552..137908) 1 NC_013132.1 hypothetical protein 137908 8356211 Cpin_0112 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119816.1 137552 R 485918 CDS YP_003119817.1 256419164 8356212 complement(138076..138372) 1 NC_013132.1 hypothetical protein 138372 8356212 Cpin_0113 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119817.1 138076 R 485918 CDS YP_003119818.1 256419165 8356213 complement(138400..138885) 1 NC_013132.1 hypothetical protein 138885 8356213 Cpin_0114 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119818.1 138400 R 485918 CDS YP_003119819.1 256419166 8356214 complement(139394..140839) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: gur:Gura_1282 GAF sensor protein; Fis family transcriptional regulator 140839 8356214 Cpin_0115 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003119819.1 139394 R 485918 CDS YP_003119820.1 256419167 8356215 complement(140841..142937) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: gur:Gura_1729 signal transduction histidine kinase; signal transduction histidine kinase 142937 8356215 Cpin_0116 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003119820.1 140841 R 485918 CDS YP_003119821.1 256419168 8356216 complement(142930..143163) 1 NC_013132.1 hypothetical protein 143163 8356216 Cpin_0117 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119821.1 142930 R 485918 CDS YP_003119822.1 256419169 8356217 complement(143343..145667) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2118 signal transduction histidine kinase; signal transduction histidine kinase 145667 8356217 Cpin_0118 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003119822.1 143343 R 485918 CDS YP_003119823.1 256419170 8356218 complement(145860..148133) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; hypothetical protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: gur:Gura_1729 signal transduction histidine kinase; signal transduction histidine kinase 148133 8356218 Cpin_0119 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003119823.1 145860 R 485918 CDS YP_003119824.1 256419171 8356219 complement(148257..148673) 1 NC_013132.1 KEGG: bsu:BSU18010 hypothetical protein; hypothetical protein 148673 8356219 Cpin_0120 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119824.1 148257 R 485918 CDS YP_003119825.1 256419172 8356220 complement(148670..150952) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: sml:Smlt2835 TonB-dependent outer membrane protein; TonB-dependent receptor plug 150952 8356220 Cpin_0121 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003119825.1 148670 R 485918 CDS YP_003119826.1 256419173 8356221 complement(151271..152266) 1 NC_013132.1 hypothetical protein 152266 8356221 Cpin_0122 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119826.1 151271 R 485918 CDS YP_003119827.1 256419174 8356222 complement(152481..152993) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; K03564 peroxiredoxin Q/BCP; alkyl hydroperoxide reductase 152993 8356222 Cpin_0123 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003119827.1 152481 R 485918 CDS YP_003119828.1 256419175 8356223 153163..153723 1 NC_013132.1 PFAM: flavin reductase; KEGG: bbt:BBta_7416 hypothetical protein; flavin reductase 153723 8356223 Cpin_0124 Chitinophaga pinensis DSM 2588 flavin reductase YP_003119828.1 153163 D 485918 CDS YP_003119829.1 256419176 8356224 complement(153726..154124) 1 NC_013132.1 KEGG: cvi:CV_2216 hypothetical protein; hypothetical protein 154124 8356224 Cpin_0125 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119829.1 153726 R 485918 CDS YP_003119830.1 256419177 8356225 complement(154127..154480) 1 NC_013132.1 hypothetical protein 154480 8356225 Cpin_0126 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119830.1 154127 R 485918 CDS YP_003119831.1 256419178 8356226 complement(154518..155270) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_2442 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 155270 8356226 Cpin_0127 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003119831.1 154518 R 485918 CDS YP_003119832.1 256419179 8356227 complement(155313..156053) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: nmu:Nmul_A1378 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 156053 8356227 Cpin_0128 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003119832.1 155313 R 485918 CDS YP_003119833.1 256419180 8356228 complement(156153..157094) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 157094 8356228 Cpin_0129 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003119833.1 156153 R 485918 CDS YP_003119834.1 256419181 8356229 complement(157153..157452) 1 NC_013132.1 hypothetical protein 157452 8356229 Cpin_0130 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119834.1 157153 R 485918 CDS YP_003119835.1 256419182 8356230 157528..158322 1 NC_013132.1 hypothetical protein 158322 8356230 Cpin_0131 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119835.1 157528 D 485918 CDS YP_003119836.1 256419183 8356231 158819..159103 1 NC_013132.1 hypothetical protein 159103 8356231 Cpin_0132 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119836.1 158819 D 485918 CDS YP_003119837.1 256419184 8356232 complement(159381..162023) 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 162023 8356232 Cpin_0133 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003119837.1 159381 R 485918 CDS YP_003119838.1 256419185 8356233 complement(162103..164757) 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein; glycoside hydrolase 164757 8356233 Cpin_0134 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003119838.1 162103 R 485918 CDS YP_003119839.1 256419186 8356234 complement(164847..166328) 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 166328 8356234 Cpin_0135 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003119839.1 164847 R 485918 CDS YP_003119840.1 256419187 8356235 complement(166355..169681) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 169681 8356235 Cpin_0136 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003119840.1 166355 R 485918 CDS YP_003119841.1 256419188 8356236 complement(169964..170083) 1 NC_013132.1 hypothetical protein 170083 8356236 Cpin_0137 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119841.1 169964 R 485918 CDS YP_003119842.1 256419189 8356237 170464..171012 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: bha:BH0263 RNA polymerase sigma factor SigW; ECF subfamily RNA polymerase sigma-24 subunit 171012 8356237 Cpin_0138 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003119842.1 170464 D 485918 CDS YP_003119843.1 256419190 8356238 171061..172206 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family; anti-FecI sigma factor FecR 172206 8356238 Cpin_0139 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003119843.1 171061 D 485918 CDS YP_003119844.1 256419191 8356239 172470..173438 1 NC_013132.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: mpo:Mpop_0712 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 173438 8356239 Cpin_0140 Chitinophaga pinensis DSM 2588 C4-dicarboxylate transporter/malic acid transport protein YP_003119844.1 172470 D 485918 CDS YP_003119845.1 256419192 8356240 173480..174271 1 NC_013132.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: hch:HCH_04763 uncharacterized Fe-S protein; MOSC domain-containing protein 174271 8356240 Cpin_0141 Chitinophaga pinensis DSM 2588 MOSC domain-containing protein YP_003119845.1 173480 D 485918 CDS YP_003119846.1 256419193 8356241 174391..175428 1 NC_013132.1 hypothetical protein 175428 8356241 Cpin_0142 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119846.1 174391 D 485918 CDS YP_003119847.1 256419194 8356242 complement(175472..176161) 1 NC_013132.1 KEGG: sus:Acid_7882 hypothetical protein; hypothetical protein 176161 8356242 Cpin_0143 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119847.1 175472 R 485918 CDS YP_003119848.1 256419195 8356243 176298..177116 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_0037 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 177116 8356243 Cpin_0144 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003119848.1 176298 D 485918 CDS YP_003119849.1 256419196 8356244 177308..178621 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: son:SO_4400 proline iminopeptidase; alpha/beta hydrolase 178621 8356244 Cpin_0145 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003119849.1 177308 D 485918 CDS YP_003119850.1 256419197 8356246 complement(178818..179879) 1 NC_013132.1 hypothetical protein 179879 8356246 Cpin_0147 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119850.1 178818 R 485918 CDS YP_003119851.1 256419198 8356247 180138..181118 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pin:Ping_2781 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 181118 8356247 Cpin_0148 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003119851.1 180138 D 485918 CDS YP_003119852.1 256419199 8356248 complement(181158..182138) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_3988 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 182138 8356248 Cpin_0149 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003119852.1 181158 R 485918 CDS YP_003119853.1 256419200 8356249 complement(182282..183037) 1 NC_013132.1 KEGG: ccv:CCV52592_0360 lipoprotein; lipoprotein 183037 8356249 Cpin_0150 Chitinophaga pinensis DSM 2588 lipoprotein YP_003119853.1 182282 R 485918 CDS YP_003119854.1 256419201 8356250 complement(183106..183450) 1 NC_013132.1 hypothetical protein 183450 8356250 Cpin_0151 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119854.1 183106 R 485918 CDS YP_003119855.1 256419202 8356251 183675..184004 1 NC_013132.1 TIGRFAM: HipA N-terminal domain protein; KEGG: lpn:lpg2369 HipA (persistence to inhibition of murein or DNA biosynthesis); HipA N-terminal domain-containing protein 184004 8356251 Cpin_0152 Chitinophaga pinensis DSM 2588 HipA N-terminal domain-containing protein YP_003119855.1 183675 D 485918 CDS YP_003119856.1 256419203 8356252 184006..184923 1 NC_013132.1 PFAM: HipA domain protein; KEGG: lpn:lpg2370 hypothetical protein; HipA domain-containing protein 184923 8356252 Cpin_0153 Chitinophaga pinensis DSM 2588 HipA domain-containing protein YP_003119856.1 184006 D 485918 CDS YP_003119857.1 256419204 8356253 complement(185062..185391) 1 NC_013132.1 hypothetical protein 185391 8356253 Cpin_0154 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119857.1 185062 R 485918 CDS YP_003119858.1 256419205 8356256 187791..188867 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: hypothetical protein; fatty acid desaturase 188867 8356256 Cpin_0156 Chitinophaga pinensis DSM 2588 fatty acid desaturase YP_003119858.1 187791 D 485918 CDS YP_003119859.1 256419206 8356257 188979..190241 1 NC_013132.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: hypothetical protein; K09458 3-oxoacyl-; 3-oxoacyl-ACP synthase 190241 8356257 Cpin_0157 Chitinophaga pinensis DSM 2588 3-oxoacyl-ACP synthase YP_003119859.1 188979 D 485918 CDS YP_003119860.1 256419207 8356258 190590..193466 1 NC_013132.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bsu:BSU35160 excinuclease ABC subunit A; excinuclease ABC subunit A 193466 8356258 Cpin_0158 Chitinophaga pinensis DSM 2588 excinuclease ABC subunit A YP_003119860.1 190590 D 485918 CDS YP_003119861.1 256419208 8356259 193564..194043 1 NC_013132.1 hypothetical protein 194043 8356259 Cpin_0159 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119861.1 193564 D 485918 CDS YP_003119862.1 256419209 8356260 194009..194860 1 NC_013132.1 hypothetical protein 194860 8356260 Cpin_0160 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119862.1 194009 D 485918 CDS YP_003119863.1 256419210 8356261 complement(195012..195470) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01582 acyltransferase; N-acetyltransferase GCN5 195470 8356261 Cpin_0161 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003119863.1 195012 R 485918 CDS YP_003119864.1 256419211 8356262 195626..197125 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_1862 ABC transporter related; ABC transporter 197125 8356262 Cpin_0162 Chitinophaga pinensis DSM 2588 ABC transporter YP_003119864.1 195626 D 485918 CDS YP_003119865.1 256419212 8356263 197176..202770 1 NC_013132.1 PFAM: alpha-2-macroglobulin; alpha-2- macroglobulin domain protein 2; KEGG: abo:ABO_0898 hypothetical protein; alpha-2-macroglobulin 202770 8356263 Cpin_0163 Chitinophaga pinensis DSM 2588 alpha-2-macroglobulin YP_003119865.1 197176 D 485918 CDS YP_003119866.1 256419213 8356264 202942..205335 1 NC_013132.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; Penicillin- binding domain protein; penicillin-binding protein transpeptidase; KEGG: cja:CJA_3382 murein polymerase, , gt51B; penicillin-binding protein 1C 205335 8356264 Cpin_0164 Chitinophaga pinensis DSM 2588 penicillin-binding protein 1C YP_003119866.1 202942 D 485918 CDS YP_003119867.1 256419214 8356265 complement(205342..206601) 1 NC_013132.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: abm:ABSDF3613 ATPase; ATPase AAA 206601 8356265 Cpin_0165 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003119867.1 205342 R 485918 CDS YP_003119868.1 256419215 8356266 complement(206638..207168) 1 NC_013132.1 hypothetical protein 207168 8356266 Cpin_0166 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119868.1 206638 R 485918 CDS YP_003119869.1 256419216 8356267 207312..209390 1 NC_013132.1 PFAM: peptidase M13; peptidase M13 neprilysin; KEGG: saz:Sama_2615 endothelin-converting protein 1; endothelin-converting enzyme 209390 8356267 Cpin_0167 Chitinophaga pinensis DSM 2588 endothelin-converting enzyme YP_003119869.1 207312 D 485918 CDS YP_003119870.1 256419217 8356268 209565..209798 1 NC_013132.1 hypothetical protein 209798 8356268 Cpin_0168 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119870.1 209565 D 485918 CDS YP_003119871.1 256419218 8356269 209819..210130 1 NC_013132.1 PFAM: YHS domain protein; SMART: TRASH domain protein; KEGG: rpc:RPC_3818 heavy metal translocating P-type ATPase; YHS domain-containing protein 210130 8356269 Cpin_0169 Chitinophaga pinensis DSM 2588 YHS domain-containing protein YP_003119871.1 209819 D 485918 CDS YP_003119872.1 256419219 8356270 210177..210584 1 NC_013132.1 hypothetical protein 210584 8356270 Cpin_0170 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119872.1 210177 D 485918 CDS YP_003119873.1 256419220 8356271 complement(211125..214358) 1 NC_013132.1 KEGG: xcb:XC_1619 Oar protein; hypothetical protein 214358 8356271 Cpin_0171 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119873.1 211125 R 485918 CDS YP_003119874.1 256419221 8356272 complement(214763..215281) 1 NC_013132.1 PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; SMART: regulatory protein AsnC/Lrp family; KEGG: ppg:PputGB1_5248 AsnC family transcriptional regulator; AsnC family transcriptional regulator 215281 8356272 Cpin_0172 Chitinophaga pinensis DSM 2588 AsnC family transcriptional regulator YP_003119874.1 214763 R 485918 CDS YP_003119875.1 256419222 8356273 215459..217897 1 NC_013132.1 TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein; KEGG: sat:SYN_02966 phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 217897 8356273 Cpin_0173 Chitinophaga pinensis DSM 2588 phosphoenolpyruvate synthase YP_003119875.1 215459 D 485918 CDS YP_003119876.1 256419223 8356274 complement(217975..219120) 1 NC_013132.1 hypothetical protein 219120 8356274 Cpin_0174 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119876.1 217975 R 485918 CDS YP_003119877.1 256419224 8356275 complement(219497..220969) 1 NC_013132.1 KEGG: scl:sce5067 hypothetical protein; hypothetical protein 220969 8356275 Cpin_0175 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119877.1 219497 R 485918 CDS YP_003119878.1 256419225 8356276 complement(221066..223840) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_0272 TonB-dependent receptor; TonB-dependent receptor 223840 8356276 Cpin_0176 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003119878.1 221066 R 485918 CDS YP_003119879.1 256419226 8356277 complement(224045..224455) 1 NC_013132.1 hypothetical protein 224455 8356277 Cpin_0177 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119879.1 224045 R 485918 CDS YP_003119880.1 256419227 8356278 complement(224607..225443) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: pen:PSEEN3916 metallo-dependent phosphoesterase; metallophosphoesterase 225443 8356278 Cpin_0178 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003119880.1 224607 R 485918 CDS YP_003119881.1 256419228 8356279 225694..226347 1 NC_013132.1 PFAM: protein of unknown function DUF47; KEGG: gsu:GSU0388 hypothetical protein; hypothetical protein 226347 8356279 Cpin_0179 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119881.1 225694 D 485918 CDS YP_003119882.1 256419229 8356280 226399..227403 1 NC_013132.1 PFAM: phosphate transporter; KEGG: dar:Daro_1123 phosphate transporter; phosphate transporter 227403 8356280 Cpin_0180 Chitinophaga pinensis DSM 2588 phosphate transporter YP_003119882.1 226399 D 485918 CDS YP_003119883.1 256419230 8356281 227588..228457 1 NC_013132.1 KEGG: sfu:Sfum_2263 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 228457 8356281 Cpin_0181 Chitinophaga pinensis DSM 2588 glucose-1-phosphate thymidylyltransferase YP_003119883.1 227588 D 485918 CDS YP_003119884.1 256419231 8356282 228604..229632 1 NC_013132.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 229632 8356282 Cpin_0182 Chitinophaga pinensis DSM 2588 UDP-glucose 4-epimerase YP_003119884.1 228604 D 485918 CDS YP_003119885.1 256419232 8356283 229678..230640 1 NC_013132.1 PFAM: transketolase central region; transketolase domain protein; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit; transketolase 230640 8356283 Cpin_0183 Chitinophaga pinensis DSM 2588 transketolase YP_003119885.1 229678 D 485918 CDS YP_003119886.1 256419233 8356284 230718..231269 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mxa:MXAN_6759 RNA polymerase sigma-E factor; ECF subfamily RNA polymerase sigma-24 subunit 231269 8356284 Cpin_0184 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003119886.1 230718 D 485918 CDS YP_003119887.1 256419234 8356285 231373..232314 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 232314 8356285 Cpin_0185 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119887.1 231373 D 485918 CDS YP_003119888.1 256419235 8356286 232316..232798 1 NC_013132.1 KEGG: sfu:Sfum_0590 hypothetical protein; hypothetical protein 232798 8356286 Cpin_0186 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119888.1 232316 D 485918 CDS YP_003119889.1 256419236 8356287 complement(232872..233216) 1 NC_013132.1 KEGG: glo:Glov_0119 hypothetical protein; hypothetical protein 233216 8356287 Cpin_0187 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119889.1 232872 R 485918 CDS YP_003119890.1 256419237 8356288 complement(233281..234141) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_0708 AraC family transcriptional regulator; AraC family transcriptional regulator 234141 8356288 Cpin_0188 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003119890.1 233281 R 485918 CDS YP_003119891.1 256419238 8356289 complement(234147..234809) 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: cak:Caul_5326 beta-lactamase domain- containing protein; beta-lactamase domain-containing protein 234809 8356289 Cpin_0189 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003119891.1 234147 R 485918 CDS YP_003119892.1 256419239 8356290 complement(234914..236203) 1 NC_013132.1 PFAM: cell cycle protein; KEGG: sat:SYN_00550 rod shape-determining protein; cell cycle protein 236203 8356290 Cpin_0190 Chitinophaga pinensis DSM 2588 cell cycle protein YP_003119892.1 234914 R 485918 CDS YP_003119893.1 256419240 8356291 complement(236210..238165) 1 NC_013132.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gme:Gmet_0928 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 238165 8356291 Cpin_0191 Chitinophaga pinensis DSM 2588 peptidoglycan glycosyltransferase YP_003119893.1 236210 R 485918 CDS YP_003119894.1 256419241 8356292 complement(238364..238873) 1 NC_013132.1 TIGRFAM: rod shape-determining protein MreD; rod shape-determining protein MreD 238873 8356292 Cpin_0192 Chitinophaga pinensis DSM 2588 rod shape-determining protein MreD YP_003119894.1 238364 R 485918 CDS YP_003119895.1 256419242 8356293 complement(238870..239757) 1 NC_013132.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 239757 8356293 Cpin_0193 Chitinophaga pinensis DSM 2588 rod shape-determining protein MreC YP_003119895.1 238870 R 485918 CDS YP_003119896.1 256419243 8356294 complement(239824..240846) 1 NC_013132.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 240846 8356294 Cpin_0194 Chitinophaga pinensis DSM 2588 rod shape-determining protein MreB YP_003119896.1 239824 R 485918 CDS YP_003119897.1 256419244 8356295 complement(241203..242480) 1 NC_013132.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 242480 8356295 Cpin_0195 Chitinophaga pinensis DSM 2588 phosphoribosylamine--glycine ligase YP_003119897.1 241203 R 485918 CDS YP_003119898.1 256419245 8356296 242680..244380 1 NC_013132.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: shw:Sputw3181_1459 amino acid/peptide transporter; amino acid/peptide transporter 244380 8356296 Cpin_0196 Chitinophaga pinensis DSM 2588 amino acid/peptide transporter YP_003119898.1 242680 D 485918 CDS YP_003119899.1 256419246 8356297 244557..246608 1 NC_013132.1 TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: afw:Anae109_0264 OPT family oligopeptide transporter; oligopeptide transporter 246608 8356297 Cpin_0197 Chitinophaga pinensis DSM 2588 oligopeptide transporter YP_003119899.1 244557 D 485918 CDS YP_003119900.1 256419247 8356298 246752..247246 1 NC_013132.1 hypothetical protein 247246 8356298 Cpin_0198 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119900.1 246752 D 485918 CDS YP_003119901.1 256419248 8356299 complement(247243..248457) 1 NC_013132.1 PFAM: protein of unknown function DUF1501; KEGG: mpt:Mpe_A1451 hypothetical protein; hypothetical protein 248457 8356299 Cpin_0199 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119901.1 247243 R 485918 CDS YP_003119902.1 256419249 8356300 complement(248483..249895) 1 NC_013132.1 PFAM: Protein of unknown function DUF1800; KEGG: bxe:Bxe_A2305 hypothetical protein; hypothetical protein 249895 8356300 Cpin_0200 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119902.1 248483 R 485918 CDS YP_003119903.1 256419250 8356301 complement(250187..251395) 1 NC_013132.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: gox:GOX0447 molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein 251395 8356301 Cpin_0201 Chitinophaga pinensis DSM 2588 molybdenum cofactor synthesis domain-containing protein YP_003119903.1 250187 R 485918 CDS YP_003119904.1 256419251 8356302 251439..251921 1 NC_013132.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 251921 moaC 8356302 moaC Chitinophaga pinensis DSM 2588 molybdenum cofactor biosynthesis protein MoaC YP_003119904.1 251439 D 485918 CDS YP_003119905.1 256419252 8356303 251931..252518 1 NC_013132.1 KEGG: gox:GOX0444 bifunctional molybdenum cofactor biosynthesis protein (molybdopterin-guanine dinucleotide biosynthesis protein A and MoaD); bifunctional molybdenum cofactor biosynthesis protein MoaA/MoaD 252518 8356303 Cpin_0203 Chitinophaga pinensis DSM 2588 bifunctional molybdenum cofactor biosynthesis protein MoaA/MoaD YP_003119905.1 251931 D 485918 CDS YP_003119906.1 256419253 8356304 253225..255261 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: tcx:Tcr_2015 TonB-dependent receptor; TonB-dependent receptor 255261 8356304 Cpin_0204 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003119906.1 253225 D 485918 CDS YP_003119907.1 256419254 8356305 255275..255874 1 NC_013132.1 hypothetical protein 255874 8356305 Cpin_0205 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119907.1 255275 D 485918 CDS YP_003119908.1 256419255 8356306 255895..256578 1 NC_013132.1 hypothetical protein 256578 8356306 Cpin_0206 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119908.1 255895 D 485918 CDS YP_003119909.1 256419256 8356307 complement(256647..257063) 1 NC_013132.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mxa:MXAN_2564 molybdopterin converting factor, subunits 1/2; molybdopterin biosynthesis protein MoaE 257063 8356307 Cpin_0207 Chitinophaga pinensis DSM 2588 molybdopterin biosynthesis protein MoaE YP_003119909.1 256647 R 485918 CDS YP_003119910.1 256419257 8356308 257162..257353 1 NC_013132.1 hypothetical protein 257353 8356308 Cpin_0208 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119910.1 257162 D 485918 CDS YP_003119911.1 256419258 8356309 257505..257771 1 NC_013132.1 hypothetical protein 257771 8356309 Cpin_0209 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119911.1 257505 D 485918 CDS YP_003119912.1 256419259 8356310 complement(257806..258036) 1 NC_013132.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: bcr:BCAH187_A4855 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 258036 8356310 Cpin_0210 Chitinophaga pinensis DSM 2588 molybdopterin converting factor subunit 1 YP_003119912.1 257806 R 485918 CDS YP_003119913.1 256419260 8356311 258111..258479 1 NC_013132.1 KEGG: sus:Acid_2933 hypothetical protein; hypothetical protein 258479 8356311 Cpin_0211 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119913.1 258111 D 485918 CDS YP_003119914.1 256419261 8356313 259058..260224 1 NC_013132.1 PFAM: PepSY-associated TM helix domain protein; KEGG: abm:ABSDF0657 bifunctional protein [includes: sulfite reductase [NADPH] flavoprotein alpha- component; iron-uptake factor]; PepSY-associated TM helix domain-containing protein 260224 8356313 Cpin_0213 Chitinophaga pinensis DSM 2588 PepSY-associated TM helix domain-containing protein YP_003119914.1 259058 D 485918 CDS YP_003119915.1 256419262 8356314 complement(260301..261386) 1 NC_013132.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; rhodanese domain protein; SMART: rhodanese domain protein; KEGG: afw:Anae109_3607 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 261386 8356314 Cpin_0214 Chitinophaga pinensis DSM 2588 UBA/THIF-type NAD/FAD binding protein YP_003119915.1 260301 R 485918 CDS YP_003119916.1 256419263 8356315 complement(261383..261928) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A2820 acetyltransferase, GNAT family; N-acetyltransferase GCN5 261928 8356315 Cpin_0215 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003119916.1 261383 R 485918 CDS YP_003119917.1 256419264 8356316 complement(262001..263275) 1 NC_013132.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 263275 8356316 Cpin_0216 Chitinophaga pinensis DSM 2588 seryl-tRNA synthetase YP_003119917.1 262001 R 485918 CDS YP_003119918.1 256419265 8356317 complement(263480..265144) 1 NC_013132.1 KEGG: aba:Acid345_2524 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 265144 8356317 Cpin_0217 Chitinophaga pinensis DSM 2588 NAD+ synthetase YP_003119918.1 263480 R 485918 CDS YP_003119919.1 256419266 8356318 complement(265159..265839) 1 NC_013132.1 hypothetical protein 265839 8356318 Cpin_0218 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119919.1 265159 R 485918 CDS YP_003119920.1 256419267 8356319 265908..266957 1 NC_013132.1 hypothetical protein 266957 8356319 Cpin_0219 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119920.1 265908 D 485918 CDS YP_003119921.1 256419268 8356324 complement(267727..268605) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 268605 8356324 Cpin_0220 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119921.1 267727 R 485918 CDS YP_003119922.1 256419269 8356325 complement(268605..269231) 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mmr:Mmar10_1955 methyltransferase type 11; type 11 methyltransferase 269231 8356325 Cpin_0221 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003119922.1 268605 R 485918 CDS YP_003119923.1 256419270 8356326 complement(269418..269804) 1 NC_013132.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 269804 apaG 8356326 apaG Chitinophaga pinensis DSM 2588 ApaG protein YP_003119923.1 269418 R 485918 CDS YP_003119924.1 256419271 8356327 complement(269952..270278) 1 NC_013132.1 hypothetical protein 270278 8356327 Cpin_0223 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119924.1 269952 R 485918 CDS YP_003119925.1 256419272 8356328 complement(270363..271286) 1 NC_013132.1 hypothetical protein 271286 8356328 Cpin_0224 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119925.1 270363 R 485918 CDS YP_003119926.1 256419273 8356329 complement(271312..271857) 1 NC_013132.1 PFAM: YceI family protein; KEGG: sun:SUN_1070 hypothetical protein; hypothetical protein 271857 8356329 Cpin_0225 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119926.1 271312 R 485918 CDS YP_003119927.1 256419274 8356330 complement(271886..272263) 1 NC_013132.1 hypothetical protein 272263 8356330 Cpin_0226 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119927.1 271886 R 485918 CDS YP_003119928.1 256419275 8356331 272456..273772 1 NC_013132.1 TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-di aminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: bcy:Bcer98_0233 UDP-N-acetylmuramoylalanyl-D- glutamyl-2,6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 273772 8356331 Cpin_0227 Chitinophaga pinensis DSM 2588 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase YP_003119928.1 272456 D 485918 CDS YP_003119929.1 256419276 8356332 complement(274482..274880) 1 NC_013132.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gsu:GSU3303 methylmalonyl-CoA epimerase; methylmalonyl-CoA epimerase 274880 8356332 Cpin_0228 Chitinophaga pinensis DSM 2588 methylmalonyl-CoA epimerase YP_003119929.1 274482 R 485918 CDS YP_003119930.1 256419277 8356333 275024..276241 1 NC_013132.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aba:Acid345_0484 aminotransferase, class V; cysteine desulfurase 276241 8356333 Cpin_0229 Chitinophaga pinensis DSM 2588 cysteine desulfurase YP_003119930.1 275024 D 485918 CDS YP_003119931.1 256419278 8356334 276286..276735 1 NC_013132.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: aba:Acid345_0483 scaffold protein; nitrogen-fixing NifU domain-containing protein 276735 8356334 Cpin_0230 Chitinophaga pinensis DSM 2588 nitrogen-fixing NifU domain-containing protein YP_003119931.1 276286 D 485918 CDS YP_003119932.1 256419279 8356335 276859..277593 1 NC_013132.1 KEGG: mca:MCA1562 ABC transporter, permease protein; ABC transporter permease 277593 8356335 Cpin_0231 Chitinophaga pinensis DSM 2588 ABC transporter permease YP_003119932.1 276859 D 485918 CDS YP_003119933.1 256419280 8356336 277695..279395 1 NC_013132.1 KEGG: pae:PA4039 hypothetical protein; ABC transporter 279395 8356336 Cpin_0232 Chitinophaga pinensis DSM 2588 ABC transporter YP_003119933.1 277695 D 485918 CDS YP_003119934.1 256419281 8356337 279777..282281 1 NC_013132.1 TIGRFAM: alanine racemase; PFAM: alanine racemase; cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sat:SYN_01482 alanine racemase; bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase 282281 8356337 Cpin_0233 Chitinophaga pinensis DSM 2588 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase YP_003119934.1 279777 D 485918 CDS YP_003119935.1 256419282 8356338 282326..282985 1 NC_013132.1 KEGG: dal:Dalk_1769 lipoprotein signal peptidase; lipoprotein signal peptidase 282985 8356338 Cpin_0234 Chitinophaga pinensis DSM 2588 lipoprotein signal peptidase YP_003119935.1 282326 D 485918 CDS YP_003119936.1 256419283 8356339 283019..283210 1 NC_013132.1 hypothetical protein 283210 8356339 Cpin_0235 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119936.1 283019 D 485918 CDS YP_003119937.1 256419284 8356340 283268..286144 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sfr:Sfri_4008 TonB-dependent receptor, plug; TonB-dependent receptor 286144 8356340 Cpin_0236 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003119937.1 283268 D 485918 CDS YP_003119938.1 256419285 8356341 286350..287357 1 NC_013132.1 PFAM: protein of unknown function DUF81; KEGG: mpo:Mpop_4526 protein of unknown function DUF81; hypothetical protein 287357 8356341 Cpin_0237 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119938.1 286350 D 485918 CDS YP_003119939.1 256419286 8356342 complement(287441..288841) 1 NC_013132.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: pmu:PM0823 fumarate hydratase; class II fumarate hydratase 288841 8356342 Cpin_0238 Chitinophaga pinensis DSM 2588 class II fumarate hydratase YP_003119939.1 287441 R 485918 CDS YP_003119940.1 256419287 8356343 complement(289021..289797) 1 NC_013132.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: sus:Acid_6224 short chain enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 289797 8356343 Cpin_0239 Chitinophaga pinensis DSM 2588 enoyl-CoA hydratase/isomerase YP_003119940.1 289021 R 485918 CDS YP_003119941.1 256419288 8356344 complement(290190..290984) 1 NC_013132.1 hypothetical protein 290984 8356344 Cpin_0240 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119941.1 290190 R 485918 CDS YP_003119942.1 256419289 8356345 complement(291067..291486) 1 NC_013132.1 PFAM: cobalamin B12-binding domain protein; KEGG: ade:Adeh_1832 methylmalonyl-CoA mutase; cobalamin B12-binding domain-containing protein 291486 8356345 Cpin_0241 Chitinophaga pinensis DSM 2588 cobalamin B12-binding domain-containing protein YP_003119942.1 291067 R 485918 CDS YP_003119943.1 256419290 8356346 291616..293283 1 NC_013132.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 293283 8356346 Cpin_0242 Chitinophaga pinensis DSM 2588 glutaminyl-tRNA synthetase YP_003119943.1 291616 D 485918 CDS YP_003119944.1 256419291 8356347 complement(293362..294894) 1 NC_013132.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: glutamyl-tRNA synthetase family protein; K01885 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 294894 8356347 Cpin_0243 Chitinophaga pinensis DSM 2588 glutamyl-tRNA synthetase YP_003119944.1 293362 R 485918 CDS YP_003119945.1 256419292 8356348 294948..295574 1 NC_013132.1 PFAM: polysaccharide deacetylase; KEGG: bcy:Bcer98_2266 sporulation polysaccharide deacetylase PdaB; polysaccharide deacetylase 295574 8356348 Cpin_0244 Chitinophaga pinensis DSM 2588 polysaccharide deacetylase YP_003119945.1 294948 D 485918 CDS YP_003119946.1 256419293 8356349 complement(295628..296515) 1 NC_013132.1 hypothetical protein 296515 8356349 Cpin_0245 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119946.1 295628 R 485918 CDS YP_003119947.1 256419294 8356350 296639..297409 1 NC_013132.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: vfi:VF_0052 DNase, TatD family; TatD family hydrolase 297409 8356350 Cpin_0246 Chitinophaga pinensis DSM 2588 TatD family hydrolase YP_003119947.1 296639 D 485918 CDS YP_003119948.1 256419295 8356351 297455..298498 1 NC_013132.1 KEGG: hypothetical protein; K01424 L-asparaginase; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; type I L-asparaginase 298498 8356351 Cpin_0247 Chitinophaga pinensis DSM 2588 type I L-asparaginase YP_003119948.1 297455 D 485918 CDS YP_003119949.1 256419296 8356353 299279..300061 1 NC_013132.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: pna:Pnap_3986 transglutaminase domain protein; transglutaminase 300061 8356353 Cpin_0248 Chitinophaga pinensis DSM 2588 transglutaminase YP_003119949.1 299279 D 485918 CDS YP_003119950.1 256419297 8356354 300280..300792 1 NC_013132.1 hypothetical protein 300792 8356354 Cpin_0249 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119950.1 300280 D 485918 CDS YP_003119951.1 256419298 8356355 complement(300918..302660) 1 NC_013132.1 PFAM: zinc finger SWIM domain protein; KEGG: mgm:Mmc1_2013 zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 302660 8356355 Cpin_0250 Chitinophaga pinensis DSM 2588 zinc finger SWIM domain-containing protein YP_003119951.1 300918 R 485918 CDS YP_003119952.1 256419299 8356356 complement(302722..303057) 1 NC_013132.1 KEGG: shl:Shal_3742 AraC family transcriptional regulator; hypothetical protein 303057 8356356 Cpin_0251 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119952.1 302722 R 485918 CDS YP_003119953.1 256419300 8356357 complement(303073..303429) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: dde:Dde_1352 transcriptional regulator; HxlR family transcriptional regulator 303429 8356357 Cpin_0252 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003119953.1 303073 R 485918 CDS YP_003119954.1 256419301 8356358 303538..304404 1 NC_013132.1 PFAM: NmrA family protein; KEGG: hypothetical protein; NmrA family protein 304404 8356358 Cpin_0253 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003119954.1 303538 D 485918 CDS YP_003119955.1 256419302 8356359 304631..305920 1 NC_013132.1 PFAM: epoxide hydrolase domain protein; alpha/beta hydrolase; KEGG: rle:pRL120297 epoxide hydrolase; epoxide hydrolase domain-containing protein 305920 8356359 Cpin_0254 Chitinophaga pinensis DSM 2588 epoxide hydrolase domain-containing protein YP_003119955.1 304631 D 485918 CDS YP_003119956.1 256419303 8356360 complement(306017..306715) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: vsp:VS_2652 response regulator; winged helix family two component transcriptional regulator 306715 8356360 Cpin_0255 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003119956.1 306017 R 485918 CDS YP_003119957.1 256419304 8356361 complement(306708..308063) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bsu:BSU23110 two-component sensor histidine kinase; histidine kinase 308063 8356361 Cpin_0256 Chitinophaga pinensis DSM 2588 histidine kinase YP_003119957.1 306708 R 485918 CDS YP_003119958.1 256419305 8356362 308193..308780 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: gme:Gmet_2452 thioredoxin family protein; alkyl hydroperoxide reductase 308780 8356362 Cpin_0257 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003119958.1 308193 D 485918 CDS YP_003119959.1 256419306 8356363 complement(308849..309700) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: ank:AnaeK_0582 alpha/beta hydrolase; alpha/beta hydrolase 309700 8356363 Cpin_0258 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003119959.1 308849 R 485918 CDS YP_003119960.1 256419307 8356364 complement(309740..310552) 1 NC_013132.1 KEGG: reh:H16_B1777 hypothetical protein; hypothetical protein 310552 8356364 Cpin_0259 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119960.1 309740 R 485918 CDS YP_003119961.1 256419308 8356365 310731..311381 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 311381 8356365 Cpin_0260 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003119961.1 310731 D 485918 CDS YP_003119962.1 256419309 8356366 311493..312539 1 NC_013132.1 KEGG: rlt:Rleg2_6375 proline-specific peptidase; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase; proline-specific peptidase 312539 8356366 Cpin_0261 Chitinophaga pinensis DSM 2588 proline-specific peptidase YP_003119962.1 311493 D 485918 CDS YP_003119963.1 256419310 8356367 complement(312646..313089) 1 NC_013132.1 PFAM: protein of unknown function DUF606; KEGG: bcz:pE33L466_0268 hypothetical protein; hypothetical protein 313089 8356367 Cpin_0262 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119963.1 312646 R 485918 CDS YP_003119964.1 256419311 8356368 complement(313128..314006) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pae:PA0248 transcriptional regulator; AraC family transcriptional regulator 314006 8356368 Cpin_0263 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003119964.1 313128 R 485918 CDS YP_003119965.1 256419312 8356369 complement(314024..314641) 1 NC_013132.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: sal:Sala_2350 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 314641 8356369 Cpin_0264 Chitinophaga pinensis DSM 2588 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_003119965.1 314024 R 485918 CDS YP_003119966.1 256419313 8356370 complement(314644..314889) 1 NC_013132.1 hypothetical protein 314889 8356370 Cpin_0265 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119966.1 314644 R 485918 CDS YP_003119967.1 256419314 8356371 complement(315000..315905) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: acp:A2cp1_0578 alpha/beta hydrolase protein; alpha/beta hydrolase 315905 8356371 Cpin_0266 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003119967.1 315000 R 485918 CDS YP_003119968.1 256419315 8356372 complement(316074..316745) 1 NC_013132.1 KEGG: pat:Patl_3536 antibiotic biosynthesis monooxygenase; hypothetical protein 316745 8356372 Cpin_0267 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119968.1 316074 R 485918 CDS YP_003119969.1 256419316 8356373 316957..318912 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: yen:YE2811 hydrogenlyase transcriptional activator; Fis family transcriptional regulator 318912 8356373 Cpin_0268 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003119969.1 316957 D 485918 CDS YP_003119970.1 256419317 8356374 318946..319059 1 NC_013132.1 hypothetical protein 319059 8356374 Cpin_0269 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119970.1 318946 D 485918 CDS YP_003119971.1 256419318 8356375 319134..320030 1 NC_013132.1 PFAM: regulatory protein LysR; KEGG: bcz:BCZK4870 LysR family transcriptional regulator; LysR family transcriptional regulator 320030 8356375 Cpin_0270 Chitinophaga pinensis DSM 2588 LysR family transcriptional regulator YP_003119971.1 319134 D 485918 CDS YP_003119972.1 256419319 8356376 complement(320420..321190) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region; LytTR family two component transcriptional regulator 321190 8356376 Cpin_0271 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003119972.1 320420 R 485918 CDS YP_003119973.1 256419320 8356377 complement(321187..322245) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 322245 8356377 Cpin_0272 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003119973.1 321187 R 485918 CDS YP_003119974.1 256419321 8356379 complement(323190..325565) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor 325565 8356379 Cpin_0274 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003119974.1 323190 R 485918 CDS YP_003119975.1 256419322 8356380 325784..326728 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 326728 8356380 Cpin_0275 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003119975.1 325784 D 485918 CDS YP_003119976.1 256419323 8356381 326874..327704 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pfo:Pfl01_3278 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 327704 8356381 Cpin_0276 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003119976.1 326874 D 485918 CDS YP_003119977.1 256419324 8356382 327743..329110 1 NC_013132.1 KEGG: bvi:Bcep1808_6278 hypothetical protein; hypothetical protein 329110 8356382 Cpin_0277 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119977.1 327743 D 485918 CDS YP_003119978.1 256419325 8356383 329507..329818 1 NC_013132.1 hypothetical protein 329818 8356383 Cpin_0278 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119978.1 329507 D 485918 CDS YP_003119979.1 256419326 8356384 complement(329868..330362) 1 NC_013132.1 hypothetical protein 330362 8356384 Cpin_0279 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119979.1 329868 R 485918 CDS YP_003119980.1 256419327 8356385 complement(330467..330955) 1 NC_013132.1 hypothetical protein 330955 8356385 Cpin_0280 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119980.1 330467 R 485918 CDS YP_003119981.1 256419328 8356386 331228..331479 1 NC_013132.1 hypothetical protein 331479 8356386 Cpin_0281 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119981.1 331228 D 485918 CDS YP_003119982.1 256419329 8356387 331484..331894 1 NC_013132.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: azc:AZC_3601 N-acetylmuramoyl-L- alanine amidase; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 331894 8356387 Cpin_0282 Chitinophaga pinensis DSM 2588 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_003119982.1 331484 D 485918 CDS YP_003119983.1 256419330 8356388 331906..332337 1 NC_013132.1 hypothetical protein 332337 8356388 Cpin_0283 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119983.1 331906 D 485918 CDS YP_003119984.1 256419331 8356389 332376..333545 1 NC_013132.1 KEGG: dvu:DVU1111 hypothetical protein; hypothetical protein 333545 8356389 Cpin_0284 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119984.1 332376 D 485918 CDS YP_003119985.1 256419332 8356390 333576..333998 1 NC_013132.1 KEGG: dde:Dde_3383 hypothetical protein; hypothetical protein 333998 8356390 Cpin_0285 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119985.1 333576 D 485918 CDS YP_003119986.1 256419333 8356391 334053..334364 1 NC_013132.1 hypothetical protein 334364 8356391 Cpin_0286 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119986.1 334053 D 485918 CDS YP_003119987.1 256419334 8356392 334568..336265 1 NC_013132.1 KEGG: pst:PSPTO_0580 tail tape meausure protein; hypothetical protein 336265 8356392 Cpin_0287 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119987.1 334568 D 485918 CDS YP_003119988.1 256419335 8356393 336268..336798 1 NC_013132.1 hypothetical protein 336798 8356393 Cpin_0288 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119988.1 336268 D 485918 CDS YP_003119989.1 256419336 8356394 336798..337793 1 NC_013132.1 hypothetical protein 337793 8356394 Cpin_0289 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119989.1 336798 D 485918 CDS YP_003119990.1 256419337 8356395 337790..338257 1 NC_013132.1 hypothetical protein 338257 8356395 Cpin_0290 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119990.1 337790 D 485918 CDS YP_003119991.1 256419338 8356396 338262..338480 1 NC_013132.1 hypothetical protein 338480 8356396 Cpin_0291 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119991.1 338262 D 485918 CDS YP_003119992.1 256419339 8356397 338477..338770 1 NC_013132.1 hypothetical protein 338770 8356397 Cpin_0292 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119992.1 338477 D 485918 CDS YP_003119993.1 256419340 8356398 338748..339065 1 NC_013132.1 hypothetical protein 339065 8356398 Cpin_0293 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119993.1 338748 D 485918 CDS YP_003119994.1 256419341 8356399 339075..339917 1 NC_013132.1 hypothetical protein 339917 8356399 Cpin_0294 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119994.1 339075 D 485918 CDS YP_003119995.1 256419342 8356400 339974..340399 1 NC_013132.1 hypothetical protein 340399 8356400 Cpin_0295 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119995.1 339974 D 485918 CDS YP_003119996.1 256419343 8356401 340396..341265 1 NC_013132.1 KEGG: cja:CJA_0594 hypothetical protein; hypothetical protein 341265 8356401 Cpin_0296 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119996.1 340396 D 485918 CDS YP_003119997.1 256419344 8356402 341270..341725 1 NC_013132.1 hypothetical protein 341725 8356402 Cpin_0297 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119997.1 341270 D 485918 CDS YP_003119998.1 256419345 8356403 341748..344117 1 NC_013132.1 hypothetical protein 344117 8356403 Cpin_0298 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119998.1 341748 D 485918 CDS YP_003119999.1 256419346 8356404 344204..345739 1 NC_013132.1 KEGG: xfn:XfasM23_0780 hypothetical protein; hypothetical protein 345739 8356404 Cpin_0299 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003119999.1 344204 D 485918 CDS YP_003120000.1 256419347 8356405 complement(345851..346855) 1 NC_013132.1 KEGG: bra:BRADO6402 hypothetical protein; hypothetical protein 346855 8356405 Cpin_0300 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120000.1 345851 R 485918 CDS YP_003120001.1 256419348 8356406 complement(347322..348290) 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A1376 methyl parathion hydrolase; beta-lactamase domain-containing protein 348290 8356406 Cpin_0301 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003120001.1 347322 R 485918 CDS YP_003120002.1 256419349 8356407 complement(348378..348947) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 348947 8356407 Cpin_0302 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003120002.1 348378 R 485918 CDS YP_003120003.1 256419350 8356408 complement(348970..350181) 1 NC_013132.1 KEGG: similar to ELKS/RAB6-interacting/CAST family member 2; hypothetical protein 350181 8356408 Cpin_0303 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120003.1 348970 R 485918 CDS YP_003120004.1 256419351 8356409 350726..351352 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bcz:BCZK2243 RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 subunit 351352 8356409 Cpin_0304 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120004.1 350726 D 485918 CDS YP_003120005.1 256419352 8356410 351355..352287 1 NC_013132.1 PFAM: FecR protein; KEGG: pat:Patl_1521 FecR; anti-FecI sigma factor FecR 352287 8356410 Cpin_0305 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003120005.1 351355 D 485918 CDS YP_003120006.1 256419353 8356411 352259..353527 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 353527 8356411 Cpin_0306 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120006.1 352259 D 485918 CDS YP_003120007.1 256419354 8356412 complement(353533..354285) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sus:Acid_2309 response regulator receiver protein; LytTR family two component transcriptional regulator 354285 8356412 Cpin_0307 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003120007.1 353533 R 485918 CDS YP_003120008.1 256419355 8356413 complement(354263..355336) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 355336 8356413 Cpin_0308 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003120008.1 354263 R 485918 CDS YP_003120009.1 256419356 8356414 complement(355387..355542) 1 NC_013132.1 hypothetical protein 355542 8356414 Cpin_0309 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120009.1 355387 R 485918 CDS YP_003120010.1 256419357 8356415 355785..356591 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator; AraC family transcriptional regulator 356591 8356415 Cpin_0310 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120010.1 355785 D 485918 CDS YP_003120011.1 256419358 8356416 complement(356739..357719) 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: bja:bll0593 oxidoreductase protein; NAD-dependent epimerase/dehydratase 357719 8356416 Cpin_0311 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003120011.1 356739 R 485918 CDS YP_003120012.1 256419359 8356417 357804..358379 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: sea:SeAg_B4136 cyclic nucleotide-binding domain protein; Crp/Fnr family transcriptional regulator 358379 8356417 Cpin_0312 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003120012.1 357804 D 485918 CDS YP_003120013.1 256419360 8356418 complement(358372..359598) 1 NC_013132.1 KEGG: sus:Acid_1939 hypothetical protein; hypothetical protein 359598 8356418 Cpin_0313 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120013.1 358372 R 485918 CDS YP_003120014.1 256419361 8356419 359708..360790 1 NC_013132.1 hypothetical protein 360790 8356419 Cpin_0314 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120014.1 359708 D 485918 CDS YP_003120015.1 256419362 8356420 360842..361912 1 NC_013132.1 KEGG: abu:Abu_1527 hypothetical protein; hypothetical protein 361912 8356420 Cpin_0315 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120015.1 360842 D 485918 CDS YP_003120016.1 256419363 8356421 361899..364370 1 NC_013132.1 hypothetical protein 364370 8356421 Cpin_0316 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120016.1 361899 D 485918 CDS YP_003120017.1 256419364 8356422 364808..366748 1 NC_013132.1 PFAM: hypothetical protein; KEGG: rpi:Rpic_1605 hypothetical protein; hypothetical protein 366748 8356422 Cpin_0317 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120017.1 364808 D 485918 CDS YP_003120018.1 256419365 8356423 complement(366853..367494) 1 NC_013132.1 PFAM: protein of unknown function DUF1275; KEGG: bja:blr4263 hypothetical protein; hypothetical protein 367494 8356423 Cpin_0318 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120018.1 366853 R 485918 CDS YP_003120019.1 256419366 8356424 complement(367501..367974) 1 NC_013132.1 PFAM: ferritin Dps family protein; KEGG: cvi:CV_4253 DNA-binding stress protein; ferritin Dps family protein 367974 8356424 Cpin_0319 Chitinophaga pinensis DSM 2588 ferritin Dps family protein YP_003120019.1 367501 R 485918 CDS YP_003120020.1 256419367 8356425 complement(367987..368421) 1 NC_013132.1 PFAM: DoxX family protein; KEGG: hsm:HSM_1040 DoxX family protein; DoxX family protein 368421 8356425 Cpin_0320 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003120020.1 367987 R 485918 CDS YP_003120021.1 256419368 8356426 complement(368437..370332) 1 NC_013132.1 PFAM: amidohydrolase; KEGG: ppw:PputW619_0221 amidohydrolase 3; amidohydrolase 370332 8356426 Cpin_0321 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003120021.1 368437 R 485918 CDS YP_003120022.1 256419369 8356427 complement(370479..371144) 1 NC_013132.1 PFAM: isochorismatase hydrolase; KEGG: sml:Smlt2887 hydrolase, isochorismatase family; isochorismatase hydrolase 371144 8356427 Cpin_0322 Chitinophaga pinensis DSM 2588 isochorismatase hydrolase YP_003120022.1 370479 R 485918 CDS YP_003120023.1 256419370 8356428 371461..373884 1 NC_013132.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: pat:Patl_3730 glycoside hydrolase family protein; glycoside hydrolase 373884 8356428 Cpin_0323 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003120023.1 371461 D 485918 CDS YP_003120024.1 256419371 8356429 complement(373954..375228) 1 NC_013132.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2639 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 375228 8356429 Cpin_0324 Chitinophaga pinensis DSM 2588 response regulator receiver sensor signal transduction histidine kinase YP_003120024.1 373954 R 485918 CDS YP_003120025.1 256419372 8356430 complement(375262..381375) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: sus:Acid_2046 GAF sensor hybrid histidine kinase; GAF sensor hybrid histidine kinase 381375 8356430 Cpin_0325 Chitinophaga pinensis DSM 2588 GAF sensor hybrid histidine kinase YP_003120025.1 375262 R 485918 CDS YP_003120026.1 256419373 8356431 381534..381947 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: xop:PXO_04305 two-component system regulatory protein; response regulator receiver protein 381947 8356431 Cpin_0326 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003120026.1 381534 D 485918 CDS YP_003120027.1 256419374 8356432 381966..386030 1 NC_013132.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dps:DP0995 helicase; SNF2-like protein 386030 8356432 Cpin_0327 Chitinophaga pinensis DSM 2588 SNF2-like protein YP_003120027.1 381966 D 485918 CDS YP_003120028.1 256419375 8356433 386552..387049 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: xcb:XC_1474 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 387049 8356433 Cpin_0328 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120028.1 386552 D 485918 CDS YP_003120029.1 256419376 8356434 387079..387711 1 NC_013132.1 hypothetical protein 387711 8356434 Cpin_0329 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120029.1 387079 D 485918 CDS YP_003120030.1 256419377 8356435 387715..388194 1 NC_013132.1 PFAM: Domain of unknown function DUF1905; KEGG: xcb:XC_4260 hypothetical protein; hypothetical protein 388194 8356435 Cpin_0330 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120030.1 387715 D 485918 CDS YP_003120031.1 256419378 8356436 388247..391036 1 NC_013132.1 KEGG: mmr:Mmar10_2607 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 391036 8356436 Cpin_0331 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003120031.1 388247 D 485918 CDS YP_003120032.1 256419379 8356437 complement(391039..392040) 1 NC_013132.1 KEGG: kpe:KPK_4029 multidrug resistance protein RomA; multidrug resistance protein RomA 392040 8356437 Cpin_0332 Chitinophaga pinensis DSM 2588 multidrug resistance protein RomA YP_003120032.1 391039 R 485918 CDS YP_003120033.1 256419380 8356438 complement(392229..393107) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 393107 8356438 Cpin_0333 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120033.1 392229 R 485918 CDS YP_003120034.1 256419381 8356439 complement(393437..396022) 1 NC_013132.1 PFAM: fibronectin type III domain protein; coagulation factor 5/8 type domain protein; SMART: fibronectin type III domain protein; KEGG: pat:Patl_0123 coagulation factor 5/8 type- like; fibronectin type III domain-containing protein 396022 8356439 Cpin_0334 Chitinophaga pinensis DSM 2588 fibronectin type III domain-containing protein YP_003120034.1 393437 R 485918 CDS YP_003120035.1 256419382 8356440 complement(396238..397668) 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; KEGG: gbm:Gbem_2958 FAD dependent oxidoreductase; FAD dependent oxidoreductase 397668 8356440 Cpin_0335 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003120035.1 396238 R 485918 CDS YP_003120036.1 256419383 8356441 complement(397812..399290) 1 NC_013132.1 KEGG: mxa:MXAN_6633 hypothetical protein; hypothetical protein 399290 8356441 Cpin_0336 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120036.1 397812 R 485918 CDS YP_003120037.1 256419384 8356442 complement(399301..400647) 1 NC_013132.1 KEGG: mxa:MXAN_6633 hypothetical protein; hypothetical protein 400647 8356442 Cpin_0337 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120037.1 399301 R 485918 CDS YP_003120038.1 256419385 8356443 complement(400686..402029) 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 402029 8356443 Cpin_0338 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003120038.1 400686 R 485918 CDS YP_003120039.1 256419386 8356444 complement(402104..405235) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 405235 8356444 Cpin_0339 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003120039.1 402104 R 485918 CDS YP_003120040.1 256419387 8356445 complement(405268..406485) 1 NC_013132.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bbt:BBta_4886 sulfite oxidase (SoxC); molybdopterin binding oxidoreductase 406485 8356445 Cpin_0340 Chitinophaga pinensis DSM 2588 molybdopterin binding oxidoreductase YP_003120040.1 405268 R 485918 CDS YP_003120041.1 256419388 8356446 complement(406528..407088) 1 NC_013132.1 KEGG: cti:RALTA_B1994 cytochrome C, class I precursor; cytochrome C, class I 407088 8356446 Cpin_0341 Chitinophaga pinensis DSM 2588 cytochrome C, class I YP_003120041.1 406528 R 485918 CDS YP_003120042.1 256419389 8356447 complement(407309..407560) 1 NC_013132.1 hypothetical protein 407560 8356447 Cpin_0342 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120042.1 407309 R 485918 CDS YP_003120043.1 256419390 8356448 complement(407637..407756) 1 NC_013132.1 hypothetical protein 407756 8356448 Cpin_0343 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120043.1 407637 R 485918 CDS YP_003120044.1 256419391 8356449 complement(408305..409237) 1 NC_013132.1 hypothetical protein 409237 8356449 Cpin_0344 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120044.1 408305 R 485918 CDS YP_003120045.1 256419392 8356450 409548..411044 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcb:BCB4264_A4698 sensory box histidine kinase PhoR; histidine kinase 411044 8356450 Cpin_0345 Chitinophaga pinensis DSM 2588 histidine kinase YP_003120045.1 409548 D 485918 CDS YP_003120046.1 256419393 8356451 411103..411807 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcy:Bcer98_3794 two component transcriptional regulator; winged helix family two component transcriptional regulator 411807 8356451 Cpin_0346 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003120046.1 411103 D 485918 CDS YP_003120047.1 256419394 8356452 complement(411955..412824) 1 NC_013132.1 SMART: transcription factor jumonji jmjC domain protein; KEGG: bph:Bphy_0113 transcription factor jumonji domain-containing protein; transcription factor jumonji jmjC domain-containing protein 412824 8356452 Cpin_0347 Chitinophaga pinensis DSM 2588 transcription factor jumonji jmjC domain-containing protein YP_003120047.1 411955 R 485918 CDS YP_003120048.1 256419395 8356453 complement(412838..413650) 1 NC_013132.1 hypothetical protein 413650 8356453 Cpin_0348 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120048.1 412838 R 485918 CDS YP_003120049.1 256419396 8356454 complement(413682..416234) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_3441 TonB-dependent receptor; TonB-dependent receptor 416234 8356454 Cpin_0349 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003120049.1 413682 R 485918 CDS YP_003120050.1 256419397 8356455 complement(416277..417212) 1 NC_013132.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: scl:sce3211 hypothetical protein; cytochrome C peroxidase 417212 8356455 Cpin_0350 Chitinophaga pinensis DSM 2588 cytochrome C peroxidase YP_003120050.1 416277 R 485918 CDS YP_003120051.1 256419398 8356456 complement(417212..417871) 1 NC_013132.1 PFAM: YceI family protein; KEGG: bba:Bd2001 YCE I like family protein; hypothetical protein 417871 8356456 Cpin_0351 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120051.1 417212 R 485918 CDS YP_003120052.1 256419399 8356457 complement(417961..419244) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sus:Acid_5733 redoxin domain-containing protein; alkyl hydroperoxide reductase 419244 8356457 Cpin_0352 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003120052.1 417961 R 485918 CDS YP_003120053.1 256419400 8356458 complement(419997..421019) 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: bha:BH1867 hypothetical protein; alpha-N-arabinofuranosidase 421019 8356458 Cpin_0353 Chitinophaga pinensis DSM 2588 alpha-N-arabinofuranosidase YP_003120053.1 419997 R 485918 CDS YP_003120054.1 256419401 8356459 complement(421024..421737) 1 NC_013132.1 hypothetical protein 421737 8356459 Cpin_0354 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120054.1 421024 R 485918 CDS YP_003120055.1 256419402 8356460 complement(421761..423662) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 423662 8356460 Cpin_0355 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003120055.1 421761 R 485918 CDS YP_003120056.1 256419403 8356461 complement(423682..427068) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 427068 8356461 Cpin_0356 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120056.1 423682 R 485918 CDS YP_003120057.1 256419404 8356462 complement(427276..428421) 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN4566 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 428421 8356462 Cpin_0357 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003120057.1 427276 R 485918 CDS YP_003120058.1 256419405 8356463 complement(428459..429007) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: smt:Smal_1610 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 429007 8356463 Cpin_0358 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120058.1 428459 R 485918 CDS YP_003120059.1 256419406 8356464 429481..430437 1 NC_013132.1 PFAM: hypothetical protein; KEGG: bca:BCE_1185 hypothetical protein; hypothetical protein 430437 8356464 Cpin_0359 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120059.1 429481 D 485918 CDS YP_003120060.1 256419407 8356465 430644..431243 1 NC_013132.1 KEGG: sfu:Sfum_1727 hypothetical protein; hypothetical protein 431243 8356465 Cpin_0360 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120060.1 430644 D 485918 CDS YP_003120061.1 256419408 8356466 complement(431252..432013) 1 NC_013132.1 KEGG: bba:Bd1941 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 432013 8356466 Cpin_0361 Chitinophaga pinensis DSM 2588 ribonuclease III YP_003120061.1 431252 R 485918 CDS YP_003120062.1 256419409 8356467 complement(431979..433232) 1 NC_013132.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: hypothetical protein; K09458 3-oxoacyl-; 3-oxoacyl-ACP synthase 433232 8356467 Cpin_0362 Chitinophaga pinensis DSM 2588 3-oxoacyl-ACP synthase YP_003120062.1 431979 R 485918 CDS YP_003120063.1 256419410 8356468 complement(433257..433493) 1 NC_013132.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 433493 acpP 8356468 acpP Chitinophaga pinensis DSM 2588 acyl carrier protein YP_003120063.1 433257 R 485918 CDS YP_003120064.1 256419411 8356469 433875..434963 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dps:DP2123 multidrug ABC transporter; RND family efflux transporter MFP subunit 434963 8356469 Cpin_0364 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003120064.1 433875 D 485918 CDS YP_003120065.1 256419412 8356470 434991..438104 1 NC_013132.1 PFAM: acriflavin resistance protein; KEGG: mca:MCA2131 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 438104 8356470 Cpin_0365 Chitinophaga pinensis DSM 2588 acriflavin resistance protein YP_003120065.1 434991 D 485918 CDS YP_003120066.1 256419413 8356471 438120..439433 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_4198 outer membrane macrolide efflux protein; outer membrane efflux protein 439433 8356471 Cpin_0366 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003120066.1 438120 D 485918 CDS YP_003120067.1 256419414 8356472 complement(439523..440284) 1 NC_013132.1 hypothetical protein 440284 8356472 Cpin_0367 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120067.1 439523 R 485918 CDS YP_003120068.1 256419415 8356473 440506..441423 1 NC_013132.1 KEGG: scl:sce6540 ribose-phosphate diphosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 441423 8356473 Cpin_0368 Chitinophaga pinensis DSM 2588 ribose-phosphate pyrophosphokinase YP_003120068.1 440506 D 485918 CDS YP_003120069.1 256419416 8356474 441861..445565 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 445565 8356474 Cpin_0369 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003120069.1 441861 D 485918 CDS YP_003120070.1 256419417 8356475 445577..447037 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 447037 8356475 Cpin_0370 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120070.1 445577 D 485918 CDS YP_003120071.1 256419418 8356476 complement(447423..447902) 1 NC_013132.1 hypothetical protein 447902 8356476 Cpin_0371 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120071.1 447423 R 485918 CDS YP_003120072.1 256419419 8356477 complement(447920..448501) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 448501 8356477 Cpin_0372 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120072.1 447920 R 485918 CDS YP_003120073.1 256419420 8356478 449593..450351 1 NC_013132.1 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase 450351 8356478 Cpin_0373 Chitinophaga pinensis DSM 2588 geranylgeranylglyceryl phosphate synthase YP_003120073.1 449593 D 485918 CDS YP_003120074.1 256419421 8356479 complement(450432..451160) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: xcv:XCV2112 two-component system regulatory protein; LytTR family two component transcriptional regulator 451160 8356479 Cpin_0374 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003120074.1 450432 R 485918 CDS YP_003120075.1 256419422 8356480 complement(451198..452238) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sml:Smlt0769 transmembrane protein; signal transduction histidine kinase LytS 452238 8356480 Cpin_0375 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003120075.1 451198 R 485918 CDS YP_003120076.1 256419423 8356481 452423..454348 1 NC_013132.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 454348 8356481 Cpin_0376 Chitinophaga pinensis DSM 2588 1-deoxy-D-xylulose-5-phosphate synthase YP_003120076.1 452423 D 485918 CDS YP_003120077.1 256419424 8356482 454431..455483 1 NC_013132.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cti:RALTA_B0492 flavodoxin reductase (ferredoxin-NADPH reductase); 2Fe-2S iron-sulfur binding domain; ferredoxin 455483 8356482 Cpin_0377 Chitinophaga pinensis DSM 2588 ferredoxin YP_003120077.1 454431 D 485918 CDS YP_003120078.1 256419425 8356483 complement(455499..455873) 1 NC_013132.1 hypothetical protein 455873 8356483 Cpin_0378 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120078.1 455499 R 485918 CDS YP_003120079.1 256419426 8356485 complement(456414..456890) 1 NC_013132.1 PFAM: ferritin Dps family protein; KEGG: par:Psyc_1620 DNA-binding protein, Dps; ferritin Dps family protein 456890 8356485 Cpin_0379 Chitinophaga pinensis DSM 2588 ferritin Dps family protein YP_003120079.1 456414 R 485918 CDS YP_003120080.1 256419427 8356486 complement(456917..457627) 1 NC_013132.1 PFAM: pirin; KEGG: prw:PsycPRwf_2303 pirin domain-containing protein; pirin 457627 8356486 Cpin_0380 Chitinophaga pinensis DSM 2588 pirin YP_003120080.1 456917 R 485918 CDS YP_003120081.1 256419428 8356487 complement(457782..458192) 1 NC_013132.1 PFAM: OsmC family protein; KEGG: ilo:IL2550 organic hydroperoxide reductase; OsmC family protein 458192 8356487 Cpin_0381 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003120081.1 457782 R 485918 CDS YP_003120082.1 256419429 8356488 complement(458496..459023) 1 NC_013132.1 PFAM: YceI family protein; KEGG: YceI family protein; hypothetical protein 459023 8356488 Cpin_0382 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120082.1 458496 R 485918 CDS YP_003120083.1 256419430 8356489 complement(459279..460178) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator 460178 8356489 Cpin_0383 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120083.1 459279 R 485918 CDS YP_003120084.1 256419431 8356490 complement(460175..460957) 1 NC_013132.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bha:BH1560 segregation and condensation protein A; chromosome segregation and condensation protein ScpA 460957 8356490 Cpin_0384 Chitinophaga pinensis DSM 2588 chromosome segregation and condensation protein ScpA YP_003120084.1 460175 R 485918 CDS YP_003120085.1 256419432 8356491 complement(461051..462001) 1 NC_013132.1 hypothetical protein 462001 8356491 Cpin_0385 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120085.1 461051 R 485918 CDS YP_003120086.1 256419433 8356492 complement(462175..462606) 1 NC_013132.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bpy:Bphyt_1871 large conductance mechanosensitive channel protein; large conductance mechanosensitive channel protein 462606 8356492 Cpin_0386 Chitinophaga pinensis DSM 2588 large conductance mechanosensitive channel protein YP_003120086.1 462175 R 485918 CDS YP_003120087.1 256419434 8356493 complement(462685..463431) 1 NC_013132.1 PFAM: protein of unknown function DUF344; KEGG: mms:mma_3624 hypothetical protein; hypothetical protein 463431 8356493 Cpin_0387 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120087.1 462685 R 485918 CDS YP_003120088.1 256419435 8356494 463552..464421 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ilo:IL0026 permease; hypothetical protein 464421 8356494 Cpin_0388 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120088.1 463552 D 485918 CDS YP_003120089.1 256419436 8356495 complement(464475..465038) 1 NC_013132.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: gsu:GSU1918 ribosome recycling factor; ribosome recycling factor 465038 8356495 Cpin_0389 Chitinophaga pinensis DSM 2588 ribosome recycling factor YP_003120089.1 464475 R 485918 CDS YP_003120090.1 256419437 8356496 complement(465140..466294) 1 NC_013132.1 PFAM: glycosyl transferase family 4; KEGG: pca:Pcar_1489 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1- phosphate transferase; glycosyl transferase family protein 466294 8356496 Cpin_0390 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003120090.1 465140 R 485918 CDS YP_003120091.1 256419438 8356497 466470..467312 1 NC_013132.1 PFAM: transketolase domain protein; KEGG: gme:Gmet_0551 transketolase subunit A; transketolase 467312 8356497 Cpin_0391 Chitinophaga pinensis DSM 2588 transketolase YP_003120091.1 466470 D 485918 CDS YP_003120092.1 256419439 8356498 complement(467487..468716) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: hypothetical protein; hypothetical protein 468716 8356498 Cpin_0392 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120092.1 467487 R 485918 CDS YP_003120093.1 256419440 8356499 complement(468729..469103) 1 NC_013132.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: vvy:VV2707 ribosome-binding factor A; ribosome-binding factor A 469103 8356499 Cpin_0393 Chitinophaga pinensis DSM 2588 ribosome-binding factor A YP_003120093.1 468729 R 485918 CDS YP_003120094.1 256419441 8356500 469249..471081 1 NC_013132.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: gsu:GSU2260 ABC transporter ATP-binding protein; ABC transporter 471081 8356500 Cpin_0394 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120094.1 469249 D 485918 CDS YP_003120095.1 256419442 8356501 471347..472879 1 NC_013132.1 PFAM: glycosyl transferase family 2; haloacid dehalogenase; HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: dol:Dole_2860 glycosyl transferase family protein; family 2 glycosyl transferase 472879 8356501 Cpin_0395 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003120095.1 471347 D 485918 CDS YP_003120096.1 256419443 8356503 complement(473378..474424) 1 NC_013132.1 KEGG: har:HEAR2768 histone H1-like protein HC2 (HC2 nucleoprotein); TraR/DksA family transcriptional regulator 474424 8356503 Cpin_0397 Chitinophaga pinensis DSM 2588 TraR/DksA family transcriptional regulator YP_003120096.1 473378 R 485918 CDS YP_003120097.1 256419444 8356504 complement(474430..477981) 1 NC_013132.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: ban:BA2181 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 477981 8356504 Cpin_0398 Chitinophaga pinensis DSM 2588 isoleucyl-tRNA synthetase YP_003120097.1 474430 R 485918 CDS YP_003120098.1 256419445 8356505 478229..478693 1 NC_013132.1 KEGG: mca:MCA1928 hypothetical protein; hypothetical protein 478693 8356505 Cpin_0399 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120098.1 478229 D 485918 CDS YP_003120099.1 256419446 8356506 479334..479513 1 NC_013132.1 hypothetical protein 479513 8356506 Cpin_0400 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120099.1 479334 D 485918 CDS YP_003120100.1 256419447 8356507 complement(479583..480515) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pca:Pcar_0862 AraC family transcription regulator; AraC family transcriptional regulator 480515 8356507 Cpin_0401 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120100.1 479583 R 485918 CDS YP_003120101.1 256419448 8356508 480757..482439 1 NC_013132.1 hypothetical protein 482439 8356508 Cpin_0402 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120101.1 480757 D 485918 CDS YP_003120102.1 256419449 8356509 482567..484546 1 NC_013132.1 KEGG: bsu:BSU00060 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; DNA gyrase subunit B 484546 8356509 Cpin_0403 Chitinophaga pinensis DSM 2588 DNA gyrase subunit B YP_003120102.1 482567 D 485918 CDS YP_003120103.1 256419450 8356510 484773..485234 1 NC_013132.1 hypothetical protein 485234 8356510 Cpin_0404 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120103.1 484773 D 485918 CDS YP_003120104.1 256419451 8356511 485451..488486 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 488486 8356511 Cpin_0405 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120104.1 485451 D 485918 CDS YP_003120105.1 256419452 8356512 488500..489891 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 489891 8356512 Cpin_0406 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120105.1 488500 D 485918 CDS YP_003120106.1 256419453 8356513 complement(489967..490659) 1 NC_013132.1 PFAM: protein of unknown function DUF541; KEGG: swd:Swoo_3826 hypothetical protein; hypothetical protein 490659 8356513 Cpin_0407 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120106.1 489967 R 485918 CDS YP_003120107.1 256419454 8356514 490894..492846 1 NC_013132.1 PFAM: legume lectin beta domain; PKD domain containing protein; SMART: PKD domain containing protein; KEGG: dal:Dalk_1213 conserved repeat domain protein; legume lectin beta domain-containing protein 492846 8356514 Cpin_0408 Chitinophaga pinensis DSM 2588 legume lectin beta domain-containing protein YP_003120107.1 490894 D 485918 CDS YP_003120108.1 256419455 8356515 complement(492935..496315) 1 NC_013132.1 KEGG: bcy:Bcer98_0048 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; TRCF domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; transcription-repair coupling factor 496315 8356515 Cpin_0409 Chitinophaga pinensis DSM 2588 transcription-repair coupling factor YP_003120108.1 492935 R 485918 CDS YP_003120109.1 256419456 8356516 496429..497148 1 NC_013132.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: aba:Acid345_0992 oxidoreductase FAD/NAD(P)- binding; oxidoreductase FAD/NAD(P)-binding domain-containing protein 497148 8356516 Cpin_0410 Chitinophaga pinensis DSM 2588 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_003120109.1 496429 D 485918 CDS YP_003120110.1 256419457 8356517 complement(497215..498645) 1 NC_013132.1 TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: bba:Bd1147 glycyl-tRNA synthetase; glycyl-tRNA synthetase 498645 8356517 Cpin_0411 Chitinophaga pinensis DSM 2588 glycyl-tRNA synthetase YP_003120110.1 497215 R 485918 CDS YP_003120111.1 256419458 8356518 complement(498690..499643) 1 NC_013132.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: har:HEAR3288 ribonuclease RNase BN (RBN) transmembrane protein; ribonuclease BN 499643 8356518 Cpin_0412 Chitinophaga pinensis DSM 2588 ribonuclease BN YP_003120111.1 498690 R 485918 CDS YP_003120112.1 256419459 8356519 complement(499670..499996) 1 NC_013132.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bar:GBAA1554 hypothetical protein; MazG nucleotide pyrophosphohydrolase 499996 8356519 Cpin_0413 Chitinophaga pinensis DSM 2588 MazG nucleotide pyrophosphohydrolase YP_003120112.1 499670 R 485918 CDS YP_003120113.1 256419460 8356520 complement(500005..500457) 1 NC_013132.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 500457 8356520 Cpin_0414 Chitinophaga pinensis DSM 2588 D-tyrosyl-tRNA(Tyr) deacylase YP_003120113.1 500005 R 485918 CDS YP_003120114.1 256419461 8356521 complement(500499..501860) 1 NC_013132.1 hypothetical protein 501860 8356521 Cpin_0415 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120114.1 500499 R 485918 CDS YP_003120115.1 256419462 8356522 501946..502344 1 NC_013132.1 PFAM: class I peptide chain release factor; KEGG: ilo:IL1553 hypothetical protein; class I peptide chain release factor 502344 8356522 Cpin_0416 Chitinophaga pinensis DSM 2588 class I peptide chain release factor YP_003120115.1 501946 D 485918 CDS YP_003120116.1 256419463 8356523 502370..503908 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein; KEGG: mca:MCA1772 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 503908 8356523 Cpin_0417 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein YP_003120116.1 502370 D 485918 CDS YP_003120117.1 256419464 8356524 complement(503914..504552) 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: ppd:Ppro_0089 beta-lactamase domain- containing protein; beta-lactamase domain-containing protein 504552 8356524 Cpin_0418 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003120117.1 503914 R 485918 CDS YP_003120118.1 256419465 8356525 504609..507998 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 507998 8356525 Cpin_0419 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120118.1 504609 D 485918 CDS YP_003120119.1 256419466 8356526 complement(508055..508420) 1 NC_013132.1 PFAM: diacylglycerol kinase; KEGG: bca:BCE_4382 diacylglycerol kinase; diacylglycerol kinase 508420 8356526 Cpin_0420 Chitinophaga pinensis DSM 2588 diacylglycerol kinase YP_003120119.1 508055 R 485918 CDS YP_003120120.1 256419467 8356527 complement(508441..509796) 1 NC_013132.1 PFAM: Inner membrane CreD family protein; KEGG: sfu:Sfum_2654 hypothetical protein; hypothetical protein 509796 8356527 Cpin_0421 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120120.1 508441 R 485918 CDS YP_003120121.1 256419468 8356528 complement(509849..510148) 1 NC_013132.1 KEGG: sus:Acid_6293 transcriptional regulator; transcriptional regulator 510148 8356528 Cpin_0422 Chitinophaga pinensis DSM 2588 transcriptional regulator YP_003120121.1 509849 R 485918 CDS YP_003120122.1 256419469 8356529 complement(510193..510834) 1 NC_013132.1 KEGG: sus:Acid_6292 hypothetical protein; hypothetical protein 510834 8356529 Cpin_0423 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120122.1 510193 R 485918 CDS YP_003120123.1 256419470 8356530 complement(511086..511259) 1 NC_013132.1 hypothetical protein 511259 8356530 Cpin_0424 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120123.1 511086 R 485918 CDS YP_003120124.1 256419471 8356531 complement(511449..512639) 1 NC_013132.1 PFAM: aminotransferase class-III; KEGG: sat:SYN_02155 acetylornithine aminotransferase; class III aminotransferase 512639 8356531 Cpin_0425 Chitinophaga pinensis DSM 2588 class III aminotransferase YP_003120124.1 511449 R 485918 CDS YP_003120125.1 256419472 8356532 512696..513226 1 NC_013132.1 KEGG: hypothetical protein; isoleucine patch superfamily carbonic anhydrase/acetyltransferase 513226 8356532 Cpin_0426 Chitinophaga pinensis DSM 2588 isoleucine patch superfamily carbonic anhydrase/acetyltransferase YP_003120125.1 512696 D 485918 CDS YP_003120126.1 256419473 8356533 513266..513421 1 NC_013132.1 hypothetical protein 513421 8356533 Cpin_0427 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120126.1 513266 D 485918 CDS YP_003120127.1 256419474 8356534 513437..513592 1 NC_013132.1 hypothetical protein 513592 8356534 Cpin_0428 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120127.1 513437 D 485918 CDS YP_003120128.1 256419475 8356535 complement(513705..514640) 1 NC_013132.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 514640 8356535 Cpin_0429 Chitinophaga pinensis DSM 2588 ribosome-associated GTPase YP_003120128.1 513705 R 485918 CDS YP_003120129.1 256419476 8356536 complement(514902..515912) 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; hypothetical protein 515912 8356536 Cpin_0430 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120129.1 514902 R 485918 CDS YP_003120130.1 256419477 8356537 complement(515947..516936) 1 NC_013132.1 KEGG: mxa:MXAN_5664 hypothetical protein; hypothetical protein 516936 8356537 Cpin_0431 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120130.1 515947 R 485918 CDS YP_003120131.1 256419478 8356538 complement(516963..517826) 1 NC_013132.1 KEGG: dps:DP0636 hypothetical protein; hypothetical protein 517826 8356538 Cpin_0432 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120131.1 516963 R 485918 CDS YP_003120132.1 256419479 8356539 complement(517880..518881) 1 NC_013132.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: scl:sce6501 hypothetical protein; ATPase AAA 518881 8356539 Cpin_0433 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003120132.1 517880 R 485918 CDS YP_003120133.1 256419480 8356540 519195..519536 1 NC_013132.1 hypothetical protein 519536 8356540 Cpin_0434 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120133.1 519195 D 485918 CDS YP_003120134.1 256419481 8356541 519760..520419 1 NC_013132.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: neu:NE0042 cyclophilin-type peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 520419 8356541 Cpin_0435 Chitinophaga pinensis DSM 2588 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_003120134.1 519760 D 485918 CDS YP_003120135.1 256419482 8356542 520474..520854 1 NC_013132.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: bcy:Bcer98_3586 glycine cleavage system protein H; glycine cleavage system H protein 520854 8356542 Cpin_0436 Chitinophaga pinensis DSM 2588 glycine cleavage system H protein YP_003120135.1 520474 D 485918 CDS YP_003120136.1 256419483 8356543 520977..521369 1 NC_013132.1 KEGG: ilo:IL2132 hypothetical protein; hypothetical protein 521369 8356543 Cpin_0437 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120136.1 520977 D 485918 CDS YP_003120137.1 256419484 8356544 complement(521362..522279) 1 NC_013132.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: noc:Noc_1782 cation efflux protein; cation diffusion facilitator family transporter 522279 8356544 Cpin_0438 Chitinophaga pinensis DSM 2588 cation diffusion facilitator family transporter YP_003120137.1 521362 R 485918 CDS YP_003120138.1 256419485 8356545 complement(522376..523053) 1 NC_013132.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: sat:SYN_02561 outer membrane OmpA family protein; OmpA/MotB domain-containing protein 523053 8356545 Cpin_0439 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003120138.1 522376 R 485918 CDS YP_003120139.1 256419486 8356546 complement(523234..524298) 1 NC_013132.1 TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: hch:HCH_01733 peptide chain release factor 1; peptide chain release factor 1 524298 8356546 Cpin_0440 Chitinophaga pinensis DSM 2588 peptide chain release factor 1 YP_003120139.1 523234 R 485918 CDS YP_003120140.1 256419487 8356547 524381..525535 1 NC_013132.1 PFAM: amidohydrolase; KEGG: ade:Adeh_0370 amidohydrolase 1; amidohydrolase 525535 8356547 Cpin_0441 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003120140.1 524381 D 485918 CDS YP_003120141.1 256419488 8356548 525569..526660 1 NC_013132.1 PFAM: mechanosensitive ion channel MscS; KEGG: ppd:Ppro_3246 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 526660 8356548 Cpin_0442 Chitinophaga pinensis DSM 2588 mechanosensitive ion channel protein MscS YP_003120141.1 525569 D 485918 CDS YP_003120142.1 256419489 8356549 complement(526792..527310) 1 NC_013132.1 KEGG: saz:Sama_3212 hypothetical protein; hypothetical protein 527310 8356549 Cpin_0443 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120142.1 526792 R 485918 CDS YP_003120143.1 256419490 8356550 complement(527320..527946) 1 NC_013132.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sus:Acid_0018 MerR family transcriptional regulator; MerR family transcriptional regulator 527946 8356550 Cpin_0444 Chitinophaga pinensis DSM 2588 MerR family transcriptional regulator YP_003120143.1 527320 R 485918 CDS YP_003120144.1 256419491 8356551 complement(527998..528969) 1 NC_013132.1 PFAM: peptidase M23; KEGG: bba:Bd0398 cell wall-binding protein associated metalloendopeptidase; peptidase M23 528969 8356551 Cpin_0445 Chitinophaga pinensis DSM 2588 peptidase M23 YP_003120144.1 527998 R 485918 CDS YP_003120145.1 256419492 8356552 529255..531870 1 NC_013132.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 531870 alaS 8356552 alaS Chitinophaga pinensis DSM 2588 alanyl-tRNA synthetase YP_003120145.1 529255 D 485918 CDS YP_003120146.1 256419493 8356553 complement(532156..532329) 1 NC_013132.1 hypothetical protein 532329 8356553 Cpin_0447 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120146.1 532156 R 485918 CDS YP_003120147.1 256419494 8356554 532434..533477 1 NC_013132.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: mrd:Mrad2831_5428 protease Do; PDZ/DHR/GLGF domain-containing protein 533477 8356554 Cpin_0448 Chitinophaga pinensis DSM 2588 PDZ/DHR/GLGF domain-containing protein YP_003120147.1 532434 D 485918 CDS YP_003120148.1 256419495 8356555 complement(533535..534905) 1 NC_013132.1 PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: bha:BH0865 aldehyde dehydrogenase; aldehyde dehydrogenase 534905 8356555 Cpin_0449 Chitinophaga pinensis DSM 2588 aldehyde dehydrogenase YP_003120148.1 533535 R 485918 CDS YP_003120149.1 256419496 8356556 complement(534902..535054) 1 NC_013132.1 hypothetical protein 535054 8356556 Cpin_0450 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120149.1 534902 R 485918 CDS YP_003120150.1 256419497 8356557 535389..536843 1 NC_013132.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 536843 gatB 8356557 gatB Chitinophaga pinensis DSM 2588 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_003120150.1 535389 D 485918 CDS YP_003120151.1 256419498 8356558 536861..538006 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 538006 8356558 Cpin_0452 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003120151.1 536861 D 485918 CDS YP_003120152.1 256419499 8356559 complement(538080..539489) 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 539489 8356559 Cpin_0453 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003120152.1 538080 R 485918 CDS YP_003120153.1 256419500 8356560 complement(539509..542529) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 542529 8356560 Cpin_0454 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120153.1 539509 R 485918 CDS YP_003120154.1 256419501 8356561 complement(543042..544478) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 544478 8356561 Cpin_0455 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003120154.1 543042 R 485918 CDS YP_003120155.1 256419502 8356562 complement(544497..547490) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 547490 8356562 Cpin_0456 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120155.1 544497 R 485918 CDS YP_003120156.1 256419503 8356563 complement(547779..549227) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 549227 8356563 Cpin_0457 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120156.1 547779 R 485918 CDS YP_003120157.1 256419504 8356564 complement(549250..552465) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 552465 8356564 Cpin_0458 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120157.1 549250 R 485918 CDS YP_003120158.1 256419505 8356565 complement(553057..553746) 1 NC_013132.1 PFAM: regulatory protein LuxR; KEGG: fta:FTA_1776 IS1016 family transposase; LuxR family transcriptional regulator 553746 8356565 Cpin_0459 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003120158.1 553057 R 485918 CDS YP_003120159.1 256419506 8356566 complement(553934..556354) 1 NC_013132.1 KEGG: dol:Dole_0392 exporter of the RND superfamily protein-like protein; RND superfamily exporter 556354 8356566 Cpin_0460 Chitinophaga pinensis DSM 2588 RND superfamily exporter YP_003120159.1 553934 R 485918 CDS YP_003120160.1 256419507 8356567 556424..558721 1 NC_013132.1 KEGG: saz:Sama_0993 ligand-binding sensor domain- containing protein; two component regulator propeller domain-containing protein 558721 8356567 Cpin_0461 Chitinophaga pinensis DSM 2588 two component regulator propeller domain-containing protein YP_003120160.1 556424 D 485918 CDS YP_003120161.1 256419508 8356568 558768..559499 1 NC_013132.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: oan:Oant_2625 DNA repair protein RecO; DNA repair protein RecO 559499 8356568 Cpin_0462 Chitinophaga pinensis DSM 2588 DNA repair protein RecO YP_003120161.1 558768 D 485918 CDS YP_003120162.1 256419509 8356569 complement(559527..560318) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: gbm:Gbem_0578 metallophosphoesterase; metallophosphoesterase 560318 8356569 Cpin_0463 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003120162.1 559527 R 485918 CDS YP_003120163.1 256419510 8356570 complement(560423..560869) 1 NC_013132.1 hypothetical protein 560869 8356570 Cpin_0464 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120163.1 560423 R 485918 CDS YP_003120164.1 256419511 8356571 complement(560954..561589) 1 NC_013132.1 PFAM: protein of unknown function DUF162; KEGG: dde:Dde_1844 hypothetical protein; hypothetical protein 561589 8356571 Cpin_0465 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120164.1 560954 R 485918 CDS YP_003120165.1 256419512 8356572 complement(561596..563617) 1 NC_013132.1 KEGG: Os05g0458400; hypothetical protein; K08956 AFG3 family protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 563617 8356572 Cpin_0466 Chitinophaga pinensis DSM 2588 ATP-dependent metalloprotease FtsH YP_003120165.1 561596 R 485918 CDS YP_003120166.1 256419513 8356573 complement(563664..564071) 1 NC_013132.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: aba:Acid345_0022 iojap-related protein; iojap family protein 564071 8356573 Cpin_0467 Chitinophaga pinensis DSM 2588 iojap family protein YP_003120166.1 563664 R 485918 CDS YP_003120167.1 256419514 8356574 564312..565055 1 NC_013132.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: apa:APP7_1940 bifunctional protein BirA; biotin--acetyl-CoA-carboxylase ligase 565055 8356574 Cpin_0468 Chitinophaga pinensis DSM 2588 biotin--acetyl-CoA-carboxylase ligase YP_003120167.1 564312 D 485918 CDS YP_003120168.1 256419515 8356575 complement(565057..566589) 1 NC_013132.1 KEGG: aba:Acid345_4480 glycosyl transferase, family 39; 4-amino-4-deoxy-L-arabinose transferase 566589 8356575 Cpin_0469 Chitinophaga pinensis DSM 2588 4-amino-4-deoxy-L-arabinose transferase YP_003120168.1 565057 R 485918 CDS YP_003120169.1 256419516 8356576 566963..567907 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 567907 8356576 Cpin_0470 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120169.1 566963 D 485918 CDS YP_003120170.1 256419517 8356577 complement(568323..568655) 1 NC_013132.1 PFAM: translation initiation factor SUI1; KEGG: ypm:YP_2027 translation initiation factor SUI1; translation initiation factor SUI1 568655 8356577 Cpin_0471 Chitinophaga pinensis DSM 2588 translation initiation factor SUI1 YP_003120170.1 568323 R 485918 CDS YP_003120171.1 256419518 8356578 complement(568666..569550) 1 NC_013132.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: bha:BH1953 hypothetical protein; diacylglycerol kinase catalytic subunit 569550 8356578 Cpin_0472 Chitinophaga pinensis DSM 2588 diacylglycerol kinase catalytic subunit YP_003120171.1 568666 R 485918 CDS YP_003120172.1 256419519 8356579 complement(569562..570407) 1 NC_013132.1 KEGG: gur:Gura_2818 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 570407 8356579 Cpin_0473 Chitinophaga pinensis DSM 2588 nicotinate-nucleotide pyrophosphorylase YP_003120172.1 569562 R 485918 CDS YP_003120173.1 256419520 8356580 complement(570535..570954) 1 NC_013132.1 hypothetical protein 570954 8356580 Cpin_0474 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120173.1 570535 R 485918 CDS YP_003120174.1 256419521 8356581 571238..572761 1 NC_013132.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 572761 8356581 Cpin_0475 Chitinophaga pinensis DSM 2588 phosphoglyceromutase YP_003120174.1 571238 D 485918 CDS YP_003120175.1 256419522 8356582 572994..573566 1 NC_013132.1 hypothetical protein 573566 8356582 Cpin_0476 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120175.1 572994 D 485918 CDS YP_003120176.1 256419523 8356583 573583..575430 1 NC_013132.1 KEGG: sus:Acid_6644 excinuclease ABC subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C 575430 8356583 Cpin_0477 Chitinophaga pinensis DSM 2588 excinuclease ABC subunit C YP_003120176.1 573583 D 485918 CDS YP_003120177.1 256419524 8356584 complement(575433..576008) 1 NC_013132.1 KEGG: sus:Acid_4928 hypothetical protein; hypothetical protein 576008 8356584 Cpin_0478 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120177.1 575433 R 485918 CDS YP_003120178.1 256419525 8356585 complement(576140..577189) 1 NC_013132.1 hypothetical protein 577189 8356585 Cpin_0479 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120178.1 576140 R 485918 CDS YP_003120179.1 256419526 8356586 complement(577202..578734) 1 NC_013132.1 KEGG: azc:AZC_1915 hypothetical protein; hypothetical protein 578734 8356586 Cpin_0480 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120179.1 577202 R 485918 CDS YP_003120180.1 256419527 8356587 complement(578794..579546) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 579546 8356587 Cpin_0481 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120180.1 578794 R 485918 CDS YP_003120181.1 256419528 8356588 complement(579550..579750) 1 NC_013132.1 hypothetical protein 579750 8356588 Cpin_0482 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120181.1 579550 R 485918 CDS YP_003120182.1 256419529 8356589 complement(579778..581061) 1 NC_013132.1 PFAM: protein of unknown function DUF323; KEGG: met:M446_6750 hypothetical protein; hypothetical protein 581061 8356589 Cpin_0483 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120182.1 579778 R 485918 CDS YP_003120183.1 256419530 8356590 581134..581388 1 NC_013132.1 hypothetical protein 581388 8356590 Cpin_0484 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120183.1 581134 D 485918 CDS YP_003120184.1 256419531 8356591 complement(581547..583589) 1 NC_013132.1 PFAM: protein of unknown function DUF255; KEGG: bsu:BSU40820 hypothetical protein; hypothetical protein 583589 8356591 Cpin_0485 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120184.1 581547 R 485918 CDS YP_003120185.1 256419532 8356592 complement(583727..584518) 1 NC_013132.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: similar to uroporphyrinogen III synthase; K01719 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 584518 8356592 Cpin_0486 Chitinophaga pinensis DSM 2588 uroporphyrinogen III synthase HEM4 YP_003120185.1 583727 R 485918 CDS YP_003120186.1 256419533 8356593 complement(584561..585685) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 585685 8356593 Cpin_0487 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120186.1 584561 R 485918 CDS YP_003120187.1 256419534 8356594 585844..586968 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 586968 8356594 Cpin_0488 Chitinophaga pinensis DSM 2588 oxygen-independent coproporphyrinogen III oxidase YP_003120187.1 585844 D 485918 CDS YP_003120188.1 256419535 8356595 complement(587217..588398) 1 NC_013132.1 PFAM: aldose 1-epimerase; KEGG: sus:Acid_1458 aldose 1-epimerase; aldose 1-epimerase 588398 8356595 Cpin_0489 Chitinophaga pinensis DSM 2588 aldose 1-epimerase YP_003120188.1 587217 R 485918 CDS YP_003120189.1 256419536 8356596 complement(588531..589505) 1 NC_013132.1 PFAM: deoxyhypusine synthase; KEGG: bba:Bd2349 hypothetical protein; deoxyhypusine synthase 589505 8356596 Cpin_0490 Chitinophaga pinensis DSM 2588 deoxyhypusine synthase YP_003120189.1 588531 R 485918 CDS YP_003120190.1 256419537 8356597 complement(589630..590148) 1 NC_013132.1 hypothetical protein 590148 8356597 Cpin_0491 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120190.1 589630 R 485918 CDS YP_003120191.1 256419538 8356598 590595..591176 1 NC_013132.1 PFAM: protein of unknown function DUF479; KEGG: pha:PSHAa2467 hypothetical protein; hypothetical protein 591176 8356598 Cpin_0492 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120191.1 590595 D 485918 CDS YP_003120192.1 256419539 8356599 591246..591833 1 NC_013132.1 KEGG: aba:Acid345_1594 hypothetical protein; hypothetical protein 591833 8356599 Cpin_0493 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120192.1 591246 D 485918 CDS YP_003120193.1 256419540 8356600 592267..593406 1 NC_013132.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: mxa:MXAN_2035 Cys/Met metabolism PLP- dependent enzyme; cystathionine gamma-synthase 593406 8356600 Cpin_0494 Chitinophaga pinensis DSM 2588 cystathionine gamma-synthase YP_003120193.1 592267 D 485918 CDS YP_003120194.1 256419541 8356601 593811..594584 1 NC_013132.1 KEGG: glo:Glov_0410 hypothetical protein; hypothetical protein 594584 8356601 Cpin_0495 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120194.1 593811 D 485918 CDS YP_003120195.1 256419542 8356602 594601..595560 1 NC_013132.1 hypothetical protein 595560 8356602 Cpin_0496 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120195.1 594601 D 485918 CDS YP_003120196.1 256419543 8356603 595608..595934 1 NC_013132.1 hypothetical protein 595934 8356603 Cpin_0497 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120196.1 595608 D 485918 CDS YP_003120197.1 256419544 8356604 complement(595941..596603) 1 NC_013132.1 PFAM: fatty acid hydroxylase; KEGG: Fatty acid hydroxylase family protein; fatty acid hydroxylase 596603 8356604 Cpin_0498 Chitinophaga pinensis DSM 2588 fatty acid hydroxylase YP_003120197.1 595941 R 485918 CDS YP_003120198.1 256419545 8356605 597135..598142 1 NC_013132.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bcy:Bcer98_0229 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 598142 8356605 Cpin_0499 Chitinophaga pinensis DSM 2588 fumarylacetoacetate (FAA) hydrolase YP_003120198.1 597135 D 485918 CDS YP_003120199.1 256419546 8356606 598152..599036 1 NC_013132.1 PFAM: flavin reductase; KEGG: pha:PSHAa2199 hypothetical protein; flavin reductase 599036 8356606 Cpin_0500 Chitinophaga pinensis DSM 2588 flavin reductase YP_003120199.1 598152 D 485918 CDS YP_003120200.1 256419547 8356607 complement(599115..599861) 1 NC_013132.1 KEGG: gme:Gmet_2981 hypothetical protein; hypothetical protein 599861 8356607 Cpin_0501 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120200.1 599115 R 485918 CDS YP_003120201.1 256419548 8356608 complement(599972..600805) 1 NC_013132.1 PFAM: UspA domain protein; KEGG: hypothetical protein; UspA domain-containing protein 600805 8356608 Cpin_0502 Chitinophaga pinensis DSM 2588 UspA domain-containing protein YP_003120201.1 599972 R 485918 CDS YP_003120202.1 256419549 8356609 600943..602457 1 NC_013132.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type; KEGG: gsu:GSU2271 lysyl-tRNA synthetase; lysyl-tRNA synthetase 602457 8356609 Cpin_0503 Chitinophaga pinensis DSM 2588 lysyl-tRNA synthetase YP_003120202.1 600943 D 485918 CDS YP_003120203.1 256419550 8356610 602642..602992 1 NC_013132.1 PFAM: DoxX family protein; KEGG: rlt:Rleg2_0467 DoxX family protein; DoxX family protein 602992 8356610 Cpin_0504 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003120203.1 602642 D 485918 CDS YP_003120204.1 256419551 8356611 603079..605208 1 NC_013132.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; hypothetical protein; peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_5302 peptidase S9B dipeptidylpeptidase IV subunit; peptidase S9B dipeptidylpeptidase IV domain-containing protein 605208 8356611 Cpin_0505 Chitinophaga pinensis DSM 2588 peptidase S9B dipeptidylpeptidase IV domain-containing protein YP_003120204.1 603079 D 485918 CDS YP_003120205.1 256419552 8356612 complement(605997..606335) 1 NC_013132.1 TIGRFAM: chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: hypothetical protein; chaperone CsaA 606335 8356612 Cpin_0506 Chitinophaga pinensis DSM 2588 chaperone CsaA YP_003120205.1 605997 R 485918 CDS YP_003120206.1 256419553 8356613 complement(606699..607253) 1 NC_013132.1 PFAM: protein of unknown function DUF1239; hypothetical protein 607253 8356613 Cpin_0507 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120206.1 606699 R 485918 CDS YP_003120207.1 256419554 8356614 complement(607342..607977) 1 NC_013132.1 PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: sus:Acid_0775 peptidase S16, lon domain- containing protein; peptidase S16 lon domain-containing protein 607977 8356614 Cpin_0508 Chitinophaga pinensis DSM 2588 peptidase S16 lon domain-containing protein YP_003120207.1 607342 R 485918 CDS YP_003120208.1 256419555 8356615 608107..609156 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: lch:Lcho_0975 glycosyl transferase group 1; group 1 glycosyl transferase 609156 8356615 Cpin_0509 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003120208.1 608107 D 485918 CDS YP_003120209.1 256419556 8356616 609167..610210 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: lch:Lcho_0975 glycosyl transferase group 1; group 1 glycosyl transferase 610210 8356616 Cpin_0510 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003120209.1 609167 D 485918 CDS YP_003120210.1 256419557 8356617 complement(610269..611141) 1 NC_013132.1 KEGG: pol:Bpro_1978 hypothetical protein; hypothetical protein 611141 8356617 Cpin_0511 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120210.1 610269 R 485918 CDS YP_003120211.1 256419558 8356618 611204..612106 1 NC_013132.1 KEGG: eba:ebA2092 hypothetical protein; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase 612106 8356618 Cpin_0512 Chitinophaga pinensis DSM 2588 LAO/AO transport system ATPase YP_003120211.1 611204 D 485918 CDS YP_003120212.1 256419559 8356619 complement(612131..613396) 1 NC_013132.1 PFAM: chloride channel core; KEGG: scl:sce0443 chloride channel; chloride channel core 613396 8356619 Cpin_0513 Chitinophaga pinensis DSM 2588 chloride channel core YP_003120212.1 612131 R 485918 CDS YP_003120213.1 256419560 8356620 613770..614030 1 NC_013132.1 KEGG: noc:Noc_1304 hypothetical protein; hypothetical protein 614030 8356620 Cpin_0514 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120213.1 613770 D 485918 CDS YP_003120214.1 256419561 8356621 complement(614126..614335) 1 NC_013132.1 hypothetical protein 614335 8356621 Cpin_0515 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120214.1 614126 R 485918 CDS YP_003120215.1 256419562 8356622 complement(614379..614948) 1 NC_013132.1 PFAM: protein of unknown function DUF420; KEGG: bsu:BSU19140 hypothetical protein; hypothetical protein 614948 8356622 Cpin_0516 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120215.1 614379 R 485918 CDS YP_003120216.1 256419563 8356623 complement(615078..615764) 1 NC_013132.1 PFAM: electron transport protein SCO1/SenC; KEGG: afw:Anae109_2865 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 615764 8356623 Cpin_0517 Chitinophaga pinensis DSM 2588 electron transport protein SCO1/SenC YP_003120216.1 615078 R 485918 CDS YP_003120217.1 256419564 8356624 complement(615891..616295) 1 NC_013132.1 KEGG: sus:Acid_5593 caa(3)-type oxidase, subunit IV; hypothetical protein 616295 8356624 Cpin_0518 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120217.1 615891 R 485918 CDS YP_003120218.1 256419565 8356625 complement(616344..617018) 1 NC_013132.1 PFAM: cytochrome C oxidase subunit III; KEGG: har:HEAR1118 cytochrome-C oxidase subunit III oxidoreductase protein; cytochrome C oxidase subunit III 617018 8356625 Cpin_0519 Chitinophaga pinensis DSM 2588 cytochrome C oxidase subunit III YP_003120218.1 616344 R 485918 CDS YP_003120219.1 256419566 8356626 complement(617050..617613) 1 NC_013132.1 PFAM: cytochrome C oxidase subunit III; KEGG: sus:Acid_5591 cytochrome C oxidase, subunit III; cytochrome C oxidase subunit III 617613 8356626 Cpin_0520 Chitinophaga pinensis DSM 2588 cytochrome C oxidase subunit III YP_003120219.1 617050 R 485918 CDS YP_003120220.1 256419567 8356627 complement(617637..618539) 1 NC_013132.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: sus:Acid_4382 protoheme IX farnesyltransferase; protoheme IX farnesyltransferase 618539 8356627 Cpin_0521 Chitinophaga pinensis DSM 2588 protoheme IX farnesyltransferase YP_003120220.1 617637 R 485918 CDS YP_003120221.1 256419568 8356628 complement(618596..620428) 1 NC_013132.1 PFAM: cytochrome C oxidase subunit I; KEGG: rso:RSp1565 cytochrome C oxidase polypeptide I; cytochrome C oxidase 620428 8356628 Cpin_0522 Chitinophaga pinensis DSM 2588 cytochrome C oxidase YP_003120221.1 618596 R 485918 CDS YP_003120222.1 256419569 8356629 complement(620538..621599) 1 NC_013132.1 PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; KEGG: mlo:mlr1039 cytochrome C oxidase subunit II; cytochrome C oxidase subunit II 621599 8356629 Cpin_0523 Chitinophaga pinensis DSM 2588 cytochrome C oxidase subunit II YP_003120222.1 620538 R 485918 CDS YP_003120223.1 256419570 8356630 complement(621690..622898) 1 NC_013132.1 KEGG: mxa:MXAN_5553 hypothetical protein; hypothetical protein 622898 8356630 Cpin_0524 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120223.1 621690 R 485918 CDS YP_003120224.1 256419571 8356631 complement(622937..623581) 1 NC_013132.1 PFAM: cytochrome C class I; KEGG: mxa:MXAN_5554 cytochrome C family protein; cytochrome C class I 623581 8356631 Cpin_0525 Chitinophaga pinensis DSM 2588 cytochrome C class I YP_003120224.1 622937 R 485918 CDS YP_003120225.1 256419572 8356632 complement(623659..624252) 1 NC_013132.1 KEGG: mxa:MXAN_5555 hypothetical protein; hypothetical protein 624252 8356632 Cpin_0526 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120225.1 623659 R 485918 CDS YP_003120226.1 256419573 8356633 complement(624324..625808) 1 NC_013132.1 PFAM: polysulphide reductase NrfD; KEGG: mxa:MXAN_5556 oxidoredutase membrane subunit, NrfD family; polysulfide reductase NrfD 625808 8356633 Cpin_0527 Chitinophaga pinensis DSM 2588 polysulfide reductase NrfD YP_003120226.1 624324 R 485918 CDS YP_003120227.1 256419574 8356634 complement(625928..629014) 1 NC_013132.1 KEGG: mxa:MXAN_5557 iron-sulfur binding oxidoreductase; iron-sulfur binding oxidoreductase 629014 8356634 Cpin_0528 Chitinophaga pinensis DSM 2588 iron-sulfur binding oxidoreductase YP_003120227.1 625928 R 485918 CDS YP_003120228.1 256419575 8356635 complement(629151..630353) 1 NC_013132.1 PFAM: cytochrome C class I; KEGG: mxa:MXAN_5558 cytochrome C; cytochrome C class I 630353 8356635 Cpin_0529 Chitinophaga pinensis DSM 2588 cytochrome C class I YP_003120228.1 629151 R 485918 CDS YP_003120229.1 256419576 8356636 630832..631398 1 NC_013132.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; KEGG: phosphoribosylglycinamide formyltransferase; K00601 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 631398 8356636 Cpin_0530 Chitinophaga pinensis DSM 2588 phosphoribosylglycinamide formyltransferase YP_003120229.1 630832 D 485918 CDS YP_003120230.1 256419577 8356637 631478..632140 1 NC_013132.1 hypothetical protein 632140 8356637 Cpin_0531 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120230.1 631478 D 485918 CDS YP_003120231.1 256419578 8356638 632266..632898 1 NC_013132.1 PFAM: electron transport protein SCO1/SenC; KEGG: sus:Acid_4379 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 632898 8356638 Cpin_0532 Chitinophaga pinensis DSM 2588 electron transport protein SCO1/SenC YP_003120231.1 632266 D 485918 CDS YP_003120232.1 256419579 8356639 632915..633340 1 NC_013132.1 PFAM: ferric-uptake regulator; KEGG: cti:RALTA_A0139 transcriptional regulator, FUR family; Fur family ferric uptake regulator 633340 8356639 Cpin_0533 Chitinophaga pinensis DSM 2588 Fur family ferric uptake regulator YP_003120232.1 632915 D 485918 CDS YP_003120233.1 256419580 8356640 complement(633512..635245) 1 NC_013132.1 TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: hypothetical protein; oligoendopeptidase 635245 8356640 Cpin_0534 Chitinophaga pinensis DSM 2588 oligoendopeptidase YP_003120233.1 633512 R 485918 CDS YP_003120234.1 256419581 8356641 complement(635523..636173) 1 NC_013132.1 KEGG: nar:Saro_3059 trigger factor; hypothetical protein 636173 8356641 Cpin_0535 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120234.1 635523 R 485918 CDS YP_003120235.1 256419582 8356642 complement(636290..638887) 1 NC_013132.1 hypothetical protein 638887 8356642 Cpin_0536 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120235.1 636290 R 485918 CDS YP_003120236.1 256419583 8356643 639012..640001 1 NC_013132.1 KEGG: hypothetical protein; K00133 aspartate- semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD-binding; aspartate-semialdehyde dehydrogenase 640001 8356643 Cpin_0537 Chitinophaga pinensis DSM 2588 aspartate-semialdehyde dehydrogenase YP_003120236.1 639012 D 485918 CDS YP_003120237.1 256419584 8356644 640300..640551 1 NC_013132.1 hypothetical protein 640551 8356644 Cpin_0538 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120237.1 640300 D 485918 CDS YP_003120238.1 256419585 8356645 complement(640755..641420) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 641420 8356645 Cpin_0539 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120238.1 640755 R 485918 CDS YP_003120239.1 256419586 8356646 complement(641547..642629) 1 NC_013132.1 KEGG: mxa:MXAN_0162 hypothetical protein; hypothetical protein 642629 8356646 Cpin_0540 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120239.1 641547 R 485918 CDS YP_003120240.1 256419587 8356647 complement(642895..644283) 1 NC_013132.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mxa:MXAN_6181 ammonium transporter; ammonium transporter 644283 8356647 Cpin_0541 Chitinophaga pinensis DSM 2588 ammonium transporter YP_003120240.1 642895 R 485918 CDS YP_003120241.1 256419588 8356648 complement(644722..646776) 1 NC_013132.1 KEGG: glo:Glov_3444 excinuclease ABC, B subunit; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; SMART: DEAD-like helicase; helicase domain protein; excinuclease ABC subunit B 646776 8356648 Cpin_0542 Chitinophaga pinensis DSM 2588 excinuclease ABC subunit B YP_003120241.1 644722 R 485918 CDS YP_003120242.1 256419589 8356649 646887..647687 1 NC_013132.1 PFAM: S1/P1 nuclease; KEGG: pha:PSHAb0342 S1/P1 nuclease; S1/P1 nuclease 647687 8356649 Cpin_0543 Chitinophaga pinensis DSM 2588 S1/P1 nuclease YP_003120242.1 646887 D 485918 CDS YP_003120243.1 256419590 8356650 complement(647759..648685) 1 NC_013132.1 PFAM: PfkB domain protein; KEGG: hypothetical protein; PfkB domain-containing protein 648685 8356650 Cpin_0544 Chitinophaga pinensis DSM 2588 PfkB domain-containing protein YP_003120243.1 647759 R 485918 CDS YP_003120244.1 256419591 8356651 complement(648742..650154) 1 NC_013132.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mxa:MXAN_7119 MATE efflux family protein; MATE efflux family protein 650154 8356651 Cpin_0545 Chitinophaga pinensis DSM 2588 MATE efflux family protein YP_003120244.1 648742 R 485918 CDS YP_003120245.1 256419592 8356652 650567..651067 1 NC_013132.1 hypothetical protein 651067 8356652 Cpin_0546 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120245.1 650567 D 485918 CDS YP_003120246.1 256419593 8356653 complement(651230..653245) 1 NC_013132.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein; OmpA/MotB domain-containing protein 653245 8356653 Cpin_0547 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003120246.1 651230 R 485918 CDS YP_003120247.1 256419594 8356654 complement(653263..654276) 1 NC_013132.1 hypothetical protein 654276 8356654 Cpin_0548 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120247.1 653263 R 485918 CDS YP_003120248.1 256419595 8356655 complement(654353..667642) 1 NC_013132.1 PFAM: fibronectin type III domain protein; SMART: Immunoglobulin subtype; fibronectin type III domain protein; KEGG: Muc19; mucin 19; fibronectin type III domain-containing protein 667642 8356655 Cpin_0549 Chitinophaga pinensis DSM 2588 fibronectin type III domain-containing protein YP_003120248.1 654353 R 485918 CDS YP_003120249.1 256419596 8356656 668320..670956 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 670956 8356656 Cpin_0550 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120249.1 668320 D 485918 CDS YP_003120250.1 256419597 8356657 671069..671977 1 NC_013132.1 PFAM: transglutaminase domain protein; transglutaminase 671977 8356657 Cpin_0551 Chitinophaga pinensis DSM 2588 transglutaminase YP_003120250.1 671069 D 485918 CDS YP_003120251.1 256419598 8356658 671996..673840 1 NC_013132.1 PFAM: chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dal:Dalk_2865 chloride channel core; chloride channel core 673840 8356658 Cpin_0552 Chitinophaga pinensis DSM 2588 chloride channel core YP_003120251.1 671996 D 485918 CDS YP_003120252.1 256419599 8356659 673880..674422 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: aha:AHA_0343 modulator of glutathione- dependent potassium efflux system; NAD(P)H dehydrogenase (quinone) 674422 8356659 Cpin_0553 Chitinophaga pinensis DSM 2588 NAD(P)H dehydrogenase (quinone) YP_003120252.1 673880 D 485918 CDS YP_003120253.1 256419600 8356660 674435..676309 1 NC_013132.1 TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: gsu:GSU2759 potassium efflux system protein; potassium efflux system protein 676309 8356660 Cpin_0554 Chitinophaga pinensis DSM 2588 potassium efflux system protein YP_003120253.1 674435 D 485918 CDS YP_003120254.1 256419601 8356661 complement(676306..676563) 1 NC_013132.1 hypothetical protein 676563 8356661 Cpin_0555 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120254.1 676306 R 485918 CDS YP_003120255.1 256419602 8356662 complement(676596..676814) 1 NC_013132.1 hypothetical protein 676814 8356662 Cpin_0556 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120255.1 676596 R 485918 CDS YP_003120256.1 256419603 8356663 complement(677622..679202) 1 NC_013132.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aba:Acid345_3094 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 679202 8356663 Cpin_0557 Chitinophaga pinensis DSM 2588 EmrB/QacA subfamily drug resistance transporter YP_003120256.1 677622 R 485918 CDS YP_003120257.1 256419604 8356664 complement(679345..680472) 1 NC_013132.1 PFAM: secretion protein HlyD family protein; KEGG: vsp:VS_II0849 multidrug resistance protein A; secretion protein HlyD family protein 680472 8356664 Cpin_0558 Chitinophaga pinensis DSM 2588 secretion protein HlyD family protein YP_003120257.1 679345 R 485918 CDS YP_003120258.1 256419605 8356665 complement(680526..681893) 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: pna:Pnap_4182 outer membrane efflux protein; outer membrane efflux protein 681893 8356665 Cpin_0559 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003120258.1 680526 R 485918 CDS YP_003120259.1 256419606 8356666 complement(681883..682509) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_0225 TetR family transcriptional regulator; TetR family transcriptional regulator 682509 8356666 Cpin_0560 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003120259.1 681883 R 485918 CDS YP_003120260.1 256419607 8356667 683497..683622 1 NC_013132.1 hypothetical protein 683622 8356667 Cpin_0561 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120260.1 683497 D 485918 CDS YP_003120261.1 256419608 8356668 683659..684558 1 NC_013132.1 PFAM: PfkB domain protein; KEGG: sfr:Sfri_1904 PfkB domain protein; PfkB domain-containing protein 684558 8356668 Cpin_0562 Chitinophaga pinensis DSM 2588 PfkB domain-containing protein YP_003120261.1 683659 D 485918 CDS YP_003120262.1 256419609 8356669 684687..685796 1 NC_013132.1 KEGG: sus:Acid_2798 hypothetical protein; hypothetical protein 685796 8356669 Cpin_0563 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120262.1 684687 D 485918 CDS YP_003120263.1 256419610 8356670 685789..686874 1 NC_013132.1 hypothetical protein 686874 8356670 Cpin_0564 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120263.1 685789 D 485918 CDS YP_003120264.1 256419611 8356671 complement(688888..690429) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 690429 8356671 Cpin_0565 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003120264.1 688888 R 485918 CDS YP_003120265.1 256419612 8356672 complement(690454..693408) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 693408 8356672 Cpin_0566 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003120265.1 690454 R 485918 CDS YP_003120266.1 256419613 8356673 complement(693845..695449) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 695449 8356673 Cpin_0567 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120266.1 693845 R 485918 CDS YP_003120267.1 256419614 8356674 complement(695446..696486) 1 NC_013132.1 KEGG: scl:sce2447 transcriptional regulator; transcriptional regulator 696486 8356674 Cpin_0568 Chitinophaga pinensis DSM 2588 transcriptional regulator YP_003120267.1 695446 R 485918 CDS YP_003120268.1 256419615 8356676 696890..697057 1 NC_013132.1 hypothetical protein 697057 8356676 Cpin_0569 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120268.1 696890 D 485918 CDS YP_003120269.1 256419616 8356677 697230..698735 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: sde:Sde_0275 SPFH domain-containing protein/band 7 family protein; hypothetical protein 698735 8356677 Cpin_0570 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120269.1 697230 D 485918 CDS YP_003120270.1 256419617 8356678 698818..699336 1 NC_013132.1 hypothetical protein 699336 8356678 Cpin_0571 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120270.1 698818 D 485918 CDS YP_003120271.1 256419618 8356679 699409..700644 1 NC_013132.1 KEGG: cak:Caul_2985 hypothetical protein; hypothetical protein 700644 8356679 Cpin_0572 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120271.1 699409 D 485918 CDS YP_003120272.1 256419619 8356680 complement(700636..701349) 1 NC_013132.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: sde:Sde_0114 hypothetical protein; phytanoyl-CoA dioxygenase 701349 8356680 Cpin_0573 Chitinophaga pinensis DSM 2588 phytanoyl-CoA dioxygenase YP_003120272.1 700636 R 485918 CDS YP_003120273.1 256419620 8356681 complement(701346..702422) 1 NC_013132.1 KEGG: pmr:PMI1543 hypothetical protein; hypothetical protein 702422 8356681 Cpin_0574 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120273.1 701346 R 485918 CDS YP_003120274.1 256419621 8356685 703292..703777 1 NC_013132.1 PFAM: protein of unknown function DUF458; KEGG: bcz:BCZK3743 hypothetical protein; hypothetical protein 703777 8356685 Cpin_0575 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120274.1 703292 D 485918 CDS YP_003120275.1 256419622 8356686 703790..703987 1 NC_013132.1 hypothetical protein 703987 8356686 Cpin_0576 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120275.1 703790 D 485918 CDS YP_003120276.1 256419623 8356687 704521..705216 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 705216 8356687 Cpin_0577 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003120276.1 704521 D 485918 CDS YP_003120277.1 256419624 8356688 705314..707512 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; histidine kinase 707512 8356688 Cpin_0578 Chitinophaga pinensis DSM 2588 histidine kinase YP_003120277.1 705314 D 485918 CDS YP_003120278.1 256419625 8356689 707697..708236 1 NC_013132.1 KEGG: azc:AZC_1351 hypothetical protein; hypothetical protein 708236 8356689 Cpin_0579 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120278.1 707697 D 485918 CDS YP_003120279.1 256419626 8356690 708270..709112 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_3180 helix-turn-helix domain- containing protein; AraC family transcriptional regulator 709112 8356690 Cpin_0580 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120279.1 708270 D 485918 CDS YP_003120280.1 256419627 8356691 709187..709669 1 NC_013132.1 KEGG: hch:HCH_01994 hypothetical protein; hypothetical protein 709669 8356691 Cpin_0581 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120280.1 709187 D 485918 CDS YP_003120281.1 256419628 8356692 709854..710240 1 NC_013132.1 KEGG: scl:sce6314 hypothetical protein; hypothetical protein 710240 8356692 Cpin_0582 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120281.1 709854 D 485918 CDS YP_003120282.1 256419629 8356693 710810..713458 1 NC_013132.1 KEGG: aby:p3ABAYE0069 restriction enzyme; hypothetical protein 713458 8356693 Cpin_0583 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120282.1 710810 D 485918 CDS YP_003120283.1 256419630 8356694 713451..715931 1 NC_013132.1 KEGG: mex:Mext_0272 type II DNA modification enzyme; hypothetical protein 715931 8356694 Cpin_0584 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120283.1 713451 D 485918 CDS YP_003120284.1 256419631 8356695 complement(715875..717104) 1 NC_013132.1 KEGG: afw:Anae109_4224 hypothetical protein; hypothetical protein 717104 8356695 Cpin_0585 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120284.1 715875 R 485918 CDS YP_003120285.1 256419632 8356696 717307..717792 1 NC_013132.1 hypothetical protein 717792 8356696 Cpin_0586 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120285.1 717307 D 485918 CDS YP_003120286.1 256419633 8356697 complement(717704..718228) 1 NC_013132.1 hypothetical protein 718228 8356697 Cpin_0587 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120286.1 717704 R 485918 CDS YP_003120287.1 256419634 8356699 complement(718442..720001) 1 NC_013132.1 PFAM: glycosyl transferase family 39; KEGG: azo:azo0746 hypothetical protein; glycosyl transferase family protein 720001 8356699 Cpin_0588 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003120287.1 718442 R 485918 CDS YP_003120288.1 256419635 8356700 complement(720113..720451) 1 NC_013132.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: abn:AB57_1021 rieske (2Fe-2S) protein; Rieske (2Fe-2S) domain-containing protein 720451 8356700 Cpin_0589 Chitinophaga pinensis DSM 2588 Rieske (2Fe-2S) domain-containing protein YP_003120288.1 720113 R 485918 CDS YP_003120289.1 256419636 8356701 complement(720460..721650) 1 NC_013132.1 TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: swd:Swoo_4169 GTP-binding protein HflX; GTP-binding proten HflX 721650 8356701 Cpin_0590 Chitinophaga pinensis DSM 2588 GTP-binding proten HflX YP_003120289.1 720460 R 485918 CDS YP_003120290.1 256419637 8356702 721735..723762 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; hypothetical protein; KEGG: prolyl oligopeptidase family protein; peptidase S9 prolyl oligopeptidase active site domain-containing protein 723762 8356702 Cpin_0591 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003120290.1 721735 D 485918 CDS YP_003120291.1 256419638 8356703 723837..724616 1 NC_013132.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: cti:RALTA_A3047 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 724616 8356703 Cpin_0592 Chitinophaga pinensis DSM 2588 enoyl-CoA hydratase/isomerase YP_003120291.1 723837 D 485918 CDS YP_003120292.1 256419639 8356704 complement(724695..725393) 1 NC_013132.1 hypothetical protein 725393 8356704 Cpin_0593 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120292.1 724695 R 485918 CDS YP_003120293.1 256419640 8356705 725561..726607 1 NC_013132.1 KEGG: dar:Daro_1943 hypothetical protein; hypothetical protein 726607 8356705 Cpin_0594 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120293.1 725561 D 485918 CDS YP_003120294.1 256419641 8356706 726620..727153 1 NC_013132.1 KEGG: glo:Glov_2335 hypothetical protein; hypothetical protein 727153 8356706 Cpin_0595 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120294.1 726620 D 485918 CDS YP_003120295.1 256419642 8356707 complement(727209..730961) 1 NC_013132.1 PFAM: SNF2-related protein; zinc finger SWIM domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: lip:LI0168 SNF2 family DNA/RNA helicase; SNF2-like protein 730961 8356707 Cpin_0596 Chitinophaga pinensis DSM 2588 SNF2-like protein YP_003120295.1 727209 R 485918 CDS YP_003120296.1 256419643 8356708 complement(731147..731875) 1 NC_013132.1 PFAM: 2-phosphosulfolactate phosphatase; KEGG: cbs:COXBURSA331_A1552 2-phosphosulfolactate phosphatase; 2-phosphosulfolactate phosphatase 731875 8356708 Cpin_0597 Chitinophaga pinensis DSM 2588 2-phosphosulfolactate phosphatase YP_003120296.1 731147 R 485918 CDS YP_003120297.1 256419644 8356709 complement(731962..732435) 1 NC_013132.1 KEGG: sus:Acid_0961 hypothetical protein; hypothetical protein 732435 8356709 Cpin_0598 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120297.1 731962 R 485918 CDS YP_003120298.1 256419645 8356710 complement(732469..733557) 1 NC_013132.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 733557 gcvT 8356710 gcvT Chitinophaga pinensis DSM 2588 glycine cleavage system aminomethyltransferase T YP_003120298.1 732469 R 485918 CDS YP_003120299.1 256419646 8356711 733758..735425 1 NC_013132.1 PFAM: peptidase M28; peptidase M20; SMART: PDZ/DHR/GLGF domain protein; KEGG: aba:Acid345_3483 peptidase M28; peptidase M28 735425 8356711 Cpin_0600 Chitinophaga pinensis DSM 2588 peptidase M28 YP_003120299.1 733758 D 485918 CDS YP_003120300.1 256419647 8356712 735463..735873 1 NC_013132.1 hypothetical protein 735873 8356712 Cpin_0601 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120300.1 735463 D 485918 CDS YP_003120301.1 256419648 8356713 735922..736608 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_7192 hydrolase, NUDIX family; NUDIX hydrolase 736608 8356713 Cpin_0602 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003120301.1 735922 D 485918 CDS YP_003120302.1 256419649 8356714 complement(736617..739046) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 739046 8356714 Cpin_0603 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120302.1 736617 R 485918 CDS YP_003120303.1 256419650 8356715 complement(739243..740049) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pde:Pden_3117 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 740049 8356715 Cpin_0604 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003120303.1 739243 R 485918 CDS YP_003120304.1 256419651 8356716 complement(740147..740956) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 740956 8356716 Cpin_0605 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120304.1 740147 R 485918 CDS YP_003120305.1 256419652 8356717 741231..742142 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: dac:Daci_5608 cytidyltransferase-like protein; NUDIX hydrolase 742142 8356717 Cpin_0606 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003120305.1 741231 D 485918 CDS YP_003120306.1 256419653 8356718 742154..743569 1 NC_013132.1 PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: hypothetical protein; nicotinate phosphoribosyltransferase 743569 8356718 Cpin_0607 Chitinophaga pinensis DSM 2588 nicotinate phosphoribosyltransferase YP_003120306.1 742154 D 485918 CDS YP_003120307.1 256419654 8356719 complement(743678..746857) 1 NC_013132.1 PFAM: acriflavin resistance protein; KEGG: dde:Dde_0965 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 746857 8356719 Cpin_0608 Chitinophaga pinensis DSM 2588 acriflavin resistance protein YP_003120307.1 743678 R 485918 CDS YP_003120308.1 256419655 8356720 complement(746864..747925) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: asa:ASA_0024 membrane-fusion protein; RND family efflux transporter MFP subunit 747925 8356720 Cpin_0609 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003120308.1 746864 R 485918 CDS YP_003120309.1 256419656 8356721 complement(747958..749319) 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: dde:Dde_0961 outer membrane protein; outer membrane efflux protein 749319 8356721 Cpin_0610 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003120309.1 747958 R 485918 CDS YP_003120310.1 256419657 8356722 complement(749372..749983) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: bca:BCE_3313 TetR family transcriptional regulator; TetR family transcriptional regulator 749983 8356722 Cpin_0611 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003120310.1 749372 R 485918 CDS YP_003120311.1 256419658 8356723 complement(749993..750607) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: hne:HNE_0134 TetR family transcriptional regulator; TetR family transcriptional regulator 750607 8356723 Cpin_0612 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003120311.1 749993 R 485918 CDS YP_003120312.1 256419659 8356724 complement(751136..751471) 1 NC_013132.1 hypothetical protein 751471 8356724 Cpin_0613 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120312.1 751136 R 485918 CDS YP_003120313.1 256419660 8356725 752341..752835 1 NC_013132.1 hypothetical protein 752835 8356725 Cpin_0614 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120313.1 752341 D 485918 CDS YP_003120314.1 256419661 8356726 complement(752939..754198) 1 NC_013132.1 PFAM: aminotransferase class I and II; KEGG: mxa:MXAN_0531 aminotransferase, class I; class I and II aminotransferase 754198 8356726 Cpin_0615 Chitinophaga pinensis DSM 2588 class I and II aminotransferase YP_003120314.1 752939 R 485918 CDS YP_003120315.1 256419662 8356727 754546..755664 1 NC_013132.1 KEGG: aba:Acid345_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain; DNA polymerase III subunit beta 755664 8356727 Cpin_0616 Chitinophaga pinensis DSM 2588 DNA polymerase III subunit beta YP_003120315.1 754546 D 485918 CDS YP_003120316.1 256419663 8356728 755865..756719 1 NC_013132.1 PFAM: fatty acid hydroxylase; KEGG: eli:ELI_10990 sterol desaturase,-like protein; fatty acid hydroxylase 756719 8356728 Cpin_0617 Chitinophaga pinensis DSM 2588 fatty acid hydroxylase YP_003120316.1 755865 D 485918 CDS YP_003120317.1 256419664 8356729 756748..757005 1 NC_013132.1 hypothetical protein 757005 8356729 Cpin_0618 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120317.1 756748 D 485918 CDS YP_003120318.1 256419665 8356730 complement(757089..757589) 1 NC_013132.1 hypothetical protein 757589 8356730 Cpin_0619 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120318.1 757089 R 485918 CDS YP_003120319.1 256419666 8356731 757828..758031 1 NC_013132.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mms:mma_0316 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 758031 8356731 Cpin_0620 Chitinophaga pinensis DSM 2588 thiamine biosynthesis protein ThiS YP_003120319.1 757828 D 485918 CDS YP_003120320.1 256419667 8356732 758185..760014 1 NC_013132.1 TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: mxa:MXAN_4235 thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 760014 8356732 Cpin_0621 Chitinophaga pinensis DSM 2588 thiamine biosynthesis protein ThiC YP_003120320.1 758185 D 485918 CDS YP_003120321.1 256419668 8356733 760014..760628 1 NC_013132.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_0602 thiamine monophosphate synthase; thiamine monophosphate synthase 760628 8356733 Cpin_0622 Chitinophaga pinensis DSM 2588 thiamine monophosphate synthase YP_003120321.1 760014 D 485918 CDS YP_003120322.1 256419669 8356734 760601..761368 1 NC_013132.1 PFAM: phosphomethylpyrimidine kinase type-1; KEGG: sme:SM_b20962 phoshomethylpyrimidine kinase protein; phosphomethylpyrimidine kinase 761368 8356734 Cpin_0623 Chitinophaga pinensis DSM 2588 phosphomethylpyrimidine kinase YP_003120322.1 760601 D 485918 CDS YP_003120323.1 256419670 8356735 761365..761979 1 NC_013132.1 KEGG: thiamine biosynthetic bifunctional enzyme Thi4; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 761979 8356735 Cpin_0624 Chitinophaga pinensis DSM 2588 thiamine-phosphate pyrophosphorylase YP_003120323.1 761365 D 485918 CDS YP_003120324.1 256419671 8356736 761976..762749 1 NC_013132.1 PFAM: thiazole biosynthesis family protein; KEGG: vsa:VSAL_I2987 thiamine biosynthesis protein ThiG; thiazole biosynthesis family protein 762749 8356736 Cpin_0625 Chitinophaga pinensis DSM 2588 thiazole biosynthesis family protein YP_003120324.1 761976 D 485918 CDS YP_003120325.1 256419672 8356737 762761..763870 1 NC_013132.1 TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: vpa:VP3022 thiamine biosynthesis protein ThiH; thiazole biosynthesis protein ThiH 763870 8356737 Cpin_0626 Chitinophaga pinensis DSM 2588 thiazole biosynthesis protein ThiH YP_003120325.1 762761 D 485918 CDS YP_003120326.1 256419673 8356738 complement(764066..764527) 1 NC_013132.1 KEGG: nmu:Nmul_A1577 hypothetical protein; hypothetical protein 764527 8356738 Cpin_0627 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120326.1 764066 R 485918 CDS YP_003120327.1 256419674 8356739 764841..764993 1 NC_013132.1 KEGG: dar:Daro_2056 hypothetical protein; hypothetical protein 764993 8356739 Cpin_0628 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120327.1 764841 D 485918 CDS YP_003120328.1 256419675 8356740 765318..766040 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 766040 8356740 Cpin_0629 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120328.1 765318 D 485918 CDS YP_003120329.1 256419676 8356741 766073..766900 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 766900 8356741 Cpin_0630 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120329.1 766073 D 485918 CDS YP_003120330.1 256419677 8356742 767031..768161 1 NC_013132.1 KEGG: cak:Caul_0310 hypothetical protein; hypothetical protein 768161 8356742 Cpin_0631 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120330.1 767031 D 485918 CDS YP_003120331.1 256419678 8356743 complement(768193..768309) 1 NC_013132.1 hypothetical protein 768309 8356743 Cpin_0632 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120331.1 768193 R 485918 CDS YP_003120332.1 256419679 8356744 768636..771791 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 771791 8356744 Cpin_0633 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120332.1 768636 D 485918 CDS YP_003120333.1 256419680 8356745 771822..773390 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 773390 8356745 Cpin_0634 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003120333.1 771822 D 485918 CDS YP_003120334.1 256419681 8356746 complement(773474..774238) 1 NC_013132.1 KEGG: bsu:BSU07690 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 774238 8356746 Cpin_0635 Chitinophaga pinensis DSM 2588 methionine aminopeptidase YP_003120334.1 773474 R 485918 CDS YP_003120335.1 256419682 8356747 complement(774246..774932) 1 NC_013132.1 TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; KEGG: thymidylate kinase; K00943 dTMP kinase; thymidylate kinase 774932 8356747 Cpin_0636 Chitinophaga pinensis DSM 2588 thymidylate kinase YP_003120335.1 774246 R 485918 CDS YP_003120336.1 256419683 8356748 complement(774967..777840) 1 NC_013132.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: ccs:CCNA_02281 membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 777840 8356748 Cpin_0637 Chitinophaga pinensis DSM 2588 peptidase M1 membrane alanine aminopeptidase YP_003120336.1 774967 R 485918 CDS YP_003120337.1 256419684 8356749 complement(777935..779068) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cja:CJA_2991 DNA binding protein; AraC family transcriptional regulator 779068 8356749 Cpin_0638 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120337.1 777935 R 485918 CDS YP_003120338.1 256419685 8356750 complement(779109..779483) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bcn:Bcen_3630 HxlR family transcriptional regulator; HxlR family transcriptional regulator 779483 8356750 Cpin_0639 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003120338.1 779109 R 485918 CDS YP_003120339.1 256419686 8356751 779631..780506 1 NC_013132.1 PFAM: NmrA family protein; KEGG: hypothetical protein; NmrA family protein 780506 8356751 Cpin_0640 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003120339.1 779631 D 485918 CDS YP_003120340.1 256419687 8356752 complement(780562..781068) 1 NC_013132.1 hypothetical protein 781068 8356752 Cpin_0641 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120340.1 780562 R 485918 CDS YP_003120341.1 256419688 8356753 complement(781366..782598) 1 NC_013132.1 hypothetical protein 782598 8356753 Cpin_0642 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120341.1 781366 R 485918 CDS YP_003120342.1 256419689 8356754 complement(782846..783211) 1 NC_013132.1 hypothetical protein 783211 8356754 Cpin_0643 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120342.1 782846 R 485918 CDS YP_003120343.1 256419690 8356755 complement(783881..785053) 1 NC_013132.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: hpy:HP0051 cytosine specific DNA methyltransferase (DDEM); DNA-cytosine methyltransferase 785053 8356755 Cpin_0644 Chitinophaga pinensis DSM 2588 DNA-cytosine methyltransferase YP_003120343.1 783881 R 485918 CDS YP_003120344.1 256419691 8356756 785123..785347 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ajs:Ajs_3590 XRE family transcriptional regulator; XRE family transcriptional regulator 785347 8356756 Cpin_0645 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003120344.1 785123 D 485918 CDS YP_003120345.1 256419692 8356757 785344..786057 1 NC_013132.1 SMART: HNH nuclease; HNH nuclease 786057 8356757 Cpin_0646 Chitinophaga pinensis DSM 2588 HNH nuclease YP_003120345.1 785344 D 485918 CDS YP_003120346.1 256419693 8356759 786635..787249 1 NC_013132.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: plu:plu0241 phosphatase; HAD-superfamily hydrolase 787249 8356759 Cpin_0647 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003120346.1 786635 D 485918 CDS YP_003120347.1 256419694 8356760 complement(787259..787519) 1 NC_013132.1 KEGG: GF12470 gene product from transcript GF12470- RA; hypothetical protein 787519 8356760 Cpin_0648 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120347.1 787259 R 485918 CDS YP_003120348.1 256419695 8356761 complement(787609..787959) 1 NC_013132.1 PFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 787959 8356761 Cpin_0649 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120348.1 787609 R 485918 CDS YP_003120349.1 256419696 8356762 complement(787956..788273) 1 NC_013132.1 KEGG: xac:XAC0505 hypothetical protein; hypothetical protein 788273 8356762 Cpin_0650 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120349.1 787956 R 485918 CDS YP_003120350.1 256419697 8356763 788409..788918 1 NC_013132.1 PFAM: protein of unknown function DUF150; KEGG: hypothetical protein; hypothetical protein 788918 8356763 Cpin_0651 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120350.1 788409 D 485918 CDS YP_003120351.1 256419698 8356764 788938..790185 1 NC_013132.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 790185 nusA 8356764 nusA Chitinophaga pinensis DSM 2588 transcription elongation factor NusA YP_003120351.1 788938 D 485918 CDS YP_003120352.1 256419699 8356765 790311..793925 1 NC_013132.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; KEGG: hypothetical protein; K02519 translation initiation factor IF-2; translation initiation factor IF-2 793925 8356765 Cpin_0653 Chitinophaga pinensis DSM 2588 translation initiation factor IF-2 YP_003120352.1 790311 D 485918 CDS YP_003120353.1 256419700 8356766 793965..795401 1 NC_013132.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: esa:ESA_03285 peptidyl-prolyl cis-trans isomerase SurA; PpiC-type peptidyl-prolyl cis-trans isomerase 795401 8356766 Cpin_0654 Chitinophaga pinensis DSM 2588 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003120353.1 793965 D 485918 CDS YP_003120354.1 256419701 8356767 795537..797384 1 NC_013132.1 PFAM: glutamine amidotransferase class-II; KEGG: hypothetical protein; K00764 amidophosphoribosyltransferase; amidophosphoribosyltransferase 797384 8356767 Cpin_0655 Chitinophaga pinensis DSM 2588 amidophosphoribosyltransferase YP_003120354.1 795537 D 485918 CDS YP_003120355.1 256419702 8356768 797595..798095 1 NC_013132.1 PFAM: phosphoglycerate mutase; KEGG: abu:Abu_1105 phosphohistidine phosphatase; phosphohistidine phosphatase SixA 798095 8356768 Cpin_0656 Chitinophaga pinensis DSM 2588 phosphohistidine phosphatase SixA YP_003120355.1 797595 D 485918 CDS YP_003120356.1 256419703 8356769 complement(798098..798898) 1 NC_013132.1 KEGG: PCA reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; pyrroline-5-carboxylate reductase 798898 8356769 Cpin_0657 Chitinophaga pinensis DSM 2588 pyrroline-5-carboxylate reductase YP_003120356.1 798098 R 485918 CDS YP_003120357.1 256419704 8356770 798974..799489 1 NC_013132.1 PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: ecf:ECH74115_B0084 nuclease homolog; nuclease 799489 8356770 Cpin_0658 Chitinophaga pinensis DSM 2588 nuclease YP_003120357.1 798974 D 485918 CDS YP_003120358.1 256419705 8356771 799535..802870 1 NC_013132.1 KEGG: EMB2411 (EMBRYO DEFECTIVE 2411); ATP- dependent DNA helicase; K10742 DNA replication ATP- dependent helicase Dna2; superfamily I DNA and RNA helicase 802870 8356771 Cpin_0659 Chitinophaga pinensis DSM 2588 superfamily I DNA and RNA helicase YP_003120358.1 799535 D 485918 CDS YP_003120359.1 256419706 8356772 complement(802947..803516) 1 NC_013132.1 KEGG: dac:Daci_1962 HNH endonuclease; hypothetical protein 803516 8356772 Cpin_0660 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120359.1 802947 R 485918 CDS YP_003120360.1 256419707 8356773 complement(803548..804612) 1 NC_013132.1 TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS; KEGG: scl:sce3738 dihydrouridine synthase TIM- barrel protein nifR3; hypothetical protein 804612 8356773 Cpin_0661 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120360.1 803548 R 485918 CDS YP_003120361.1 256419708 8356774 804707..805675 1 NC_013132.1 PFAM: abortive infection protein; KEGG: mxa:MXAN_3287 CAAX amino terminal protease family protein; abortive infection protein 805675 8356774 Cpin_0662 Chitinophaga pinensis DSM 2588 abortive infection protein YP_003120361.1 804707 D 485918 CDS YP_003120362.1 256419709 8356775 805707..805928 1 NC_013132.1 hypothetical protein 805928 8356775 Cpin_0663 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120362.1 805707 D 485918 CDS YP_003120363.1 256419710 8356776 805966..806853 1 NC_013132.1 PFAM: phosphatidate cytidylyltransferase; KEGG: ppr:PBPRA2963 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 806853 8356776 Cpin_0664 Chitinophaga pinensis DSM 2588 phosphatidate cytidylyltransferase YP_003120363.1 805966 D 485918 CDS YP_003120364.1 256419711 8356777 806879..807532 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 807532 8356777 Cpin_0665 Chitinophaga pinensis DSM 2588 phosphatidylserine decarboxylase YP_003120364.1 806879 D 485918 CDS YP_003120365.1 256419712 8356778 807566..807817 1 NC_013132.1 hypothetical protein 807817 8356778 Cpin_0666 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120365.1 807566 D 485918 CDS YP_003120366.1 256419713 8356779 complement(807894..808592) 1 NC_013132.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: vha:VIBHAR_06682 nucleotidase; HAD-superfamily hydrolase 808592 8356779 Cpin_0667 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003120366.1 807894 R 485918 CDS YP_003120367.1 256419714 8356780 808681..809385 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aba:Acid345_2262 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 809385 8356780 Cpin_0668 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003120367.1 808681 D 485918 CDS YP_003120368.1 256419715 8356781 809496..811475 1 NC_013132.1 KEGG: mxa:MXAN_5660 BatD protein; hypothetical protein 811475 8356781 Cpin_0669 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120368.1 809496 D 485918 CDS YP_003120369.1 256419716 8356782 811500..812258 1 NC_013132.1 PFAM: SH3 type 3 domain protein; KEGG: dal:Dalk_3468 hypothetical protein; SH3 type 3 domain-containing protein 812258 8356782 Cpin_0670 Chitinophaga pinensis DSM 2588 SH3 type 3 domain-containing protein YP_003120369.1 811500 D 485918 CDS YP_003120370.1 256419717 8356783 complement(812328..813083) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: cps:CPS_2278 LytTr DNA-binding response regulator; LytTR family two component transcriptional regulator 813083 8356783 Cpin_0671 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003120370.1 812328 R 485918 CDS YP_003120371.1 256419718 8356784 complement(813213..814082) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: hypothetical protein; signal transduction histidine kinase LytS 814082 8356784 Cpin_0672 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003120371.1 813213 R 485918 CDS YP_003120372.1 256419719 8356785 complement(814205..814912) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dol:Dole_0622 two component transcriptional regulator; winged helix family two component transcriptional regulator 814912 8356785 Cpin_0673 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003120372.1 814205 R 485918 CDS YP_003120373.1 256419720 8356786 complement(814936..815934) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_0508 integral membrane sensor signal transduction histidine kinase; histidine kinase 815934 8356786 Cpin_0674 Chitinophaga pinensis DSM 2588 histidine kinase YP_003120373.1 814936 R 485918 CDS YP_003120374.1 256419721 8356787 complement(815936..816445) 1 NC_013132.1 hypothetical protein 816445 8356787 Cpin_0675 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120374.1 815936 R 485918 CDS YP_003120375.1 256419722 8356788 complement(816489..817364) 1 NC_013132.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: sat:SYN_01278 hypothetical protein; hypothetical protein 817364 8356788 Cpin_0676 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120375.1 816489 R 485918 CDS YP_003120376.1 256419723 8356789 complement(817493..818077) 1 NC_013132.1 PFAM: pseudouridine synthase; KEGG: pfo:Pfl01_4941 ribosomal large subunit pseudouridine synthase E; pseudouridine synthase 818077 8356789 Cpin_0677 Chitinophaga pinensis DSM 2588 pseudouridine synthase YP_003120376.1 817493 R 485918 CDS YP_003120377.1 256419724 8356790 818143..818853 1 NC_013132.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bba:Bd2590 transcriptional regulatory protein; Crp/Fnr family transcriptional regulator 818853 8356790 Cpin_0678 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003120377.1 818143 D 485918 CDS YP_003120378.1 256419725 8356791 818979..821372 1 NC_013132.1 PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; KEGG: pat:Patl_2068 heavy metal translocating P- type ATPase; E1-E2 ATPase-associated domain-containing protein 821372 8356791 Cpin_0679 Chitinophaga pinensis DSM 2588 E1-E2 ATPase-associated domain-containing protein YP_003120378.1 818979 D 485918 CDS YP_003120379.1 256419726 8356792 821460..821675 1 NC_013132.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3- type; KEGG: mgm:Mmc1_2359 cytochrome oxidase maturation protein, cbb3-type; cytochrome oxidase maturation protein, cbb3- type 821675 8356792 Cpin_0680 Chitinophaga pinensis DSM 2588 cytochrome oxidase maturation protein, cbb3- type YP_003120379.1 821460 D 485918 CDS YP_003120380.1 256419727 8356793 821728..823854 1 NC_013132.1 CcoN/CcoO FixN/FixO; bifunctional cbb3-type cytochrome C oxidase subunit I/II 823854 8356793 Cpin_0681 Chitinophaga pinensis DSM 2588 bifunctional cbb3-type cytochrome C oxidase subunit I/II YP_003120380.1 821728 D 485918 CDS YP_003120381.1 256419728 8356794 823881..824048 1 NC_013132.1 hypothetical protein 824048 8356794 Cpin_0682 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120381.1 823881 D 485918 CDS YP_003120382.1 256419729 8356795 824035..825180 1 NC_013132.1 PFAM: cytochrome C class I; KEGG: mxa:MXAN_5539 cytochrome C oxidase, cbb3- type, subunit III; cytochrome C class I 825180 8356795 Cpin_0683 Chitinophaga pinensis DSM 2588 cytochrome C class I YP_003120382.1 824035 D 485918 CDS YP_003120383.1 256419730 8356796 825196..826578 1 NC_013132.1 TIGRFAM: cytochrome C oxidase accessory protein CcoG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: hypothetical protein; cytochrome C oxidase accessory protein CcoG 826578 8356796 Cpin_0684 Chitinophaga pinensis DSM 2588 cytochrome C oxidase accessory protein CcoG YP_003120383.1 825196 D 485918 CDS YP_003120384.1 256419731 8356797 826603..827040 1 NC_013132.1 PFAM: FixH family protein; KEGG: azo:azo1346 hypothetical protein; FixH family protein 827040 8356797 Cpin_0685 Chitinophaga pinensis DSM 2588 FixH family protein YP_003120384.1 826603 D 485918 CDS YP_003120385.1 256419732 8356798 827047..827763 1 NC_013132.1 KEGG: sus:Acid_3511 hypothetical protein; hypothetical protein 827763 8356798 Cpin_0686 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120385.1 827047 D 485918 CDS YP_003120386.1 256419733 8356799 827765..829123 1 NC_013132.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 829123 8356799 Cpin_0687 Chitinophaga pinensis DSM 2588 coproporphyrinogen III oxidase YP_003120386.1 827765 D 485918 CDS YP_003120387.1 256419734 8356800 829608..830552 1 NC_013132.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase LpxD; transferase hexapeptide repeat containing protein; KEGG: gur:Gura_3102 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase 830552 8356800 Cpin_0688 Chitinophaga pinensis DSM 2588 UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase YP_003120387.1 829608 D 485918 CDS YP_003120388.1 256419735 8356801 830622..831296 1 NC_013132.1 hypothetical protein 831296 8356801 Cpin_0689 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120388.1 830622 D 485918 CDS YP_003120389.1 256419736 8356802 complement(831304..832284) 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein; NAD-dependent epimerase/dehydratase 832284 8356802 Cpin_0690 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003120389.1 831304 R 485918 CDS YP_003120390.1 256419737 8356803 complement(832304..833164) 1 NC_013132.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pde:Pden_0197 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 833164 8356803 Cpin_0691 Chitinophaga pinensis DSM 2588 3-hydroxybutyryl-CoA dehydrogenase YP_003120390.1 832304 R 485918 CDS YP_003120391.1 256419738 8356804 complement(833256..834284) 1 NC_013132.1 KEGG: mca:MCA0697 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 834284 8356804 Cpin_0692 Chitinophaga pinensis DSM 2588 phenylalanyl-tRNA synthetase subunit alpha YP_003120391.1 833256 R 485918 CDS YP_003120392.1 256419739 8356805 complement(834301..834990) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcy:Bcer98_4006 two component transcriptional regulator; winged helix family two component transcriptional regulator 834990 8356805 Cpin_0693 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003120392.1 834301 R 485918 CDS YP_003120393.1 256419740 8356806 complement(835002..836441) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_0410 periplasmic sensor signal transduction histidine kinase; histidine kinase 836441 8356806 Cpin_0694 Chitinophaga pinensis DSM 2588 histidine kinase YP_003120393.1 835002 R 485918 CDS YP_003120394.1 256419741 8356807 836617..837390 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 837390 8356807 Cpin_0695 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120394.1 836617 D 485918 CDS YP_003120395.1 256419742 8356808 837440..840325 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 840325 8356808 Cpin_0696 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120395.1 837440 D 485918 CDS YP_003120396.1 256419743 8356809 complement(840525..840842) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 840842 8356809 Cpin_0697 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120396.1 840525 R 485918 CDS YP_003120397.1 256419744 8356810 841139..842032 1 NC_013132.1 PFAM: xylose isomerase; KEGG: pat:Patl_2687 twin-arginine translocation pathway signal; xylose isomerase 842032 8356810 Cpin_0698 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003120397.1 841139 D 485918 CDS YP_003120398.1 256419745 8356811 complement(842029..842571) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csa:Csal_2901 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 842571 8356811 Cpin_0699 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003120398.1 842029 R 485918 CDS YP_003120399.1 256419746 8356812 complement(842622..843263) 1 NC_013132.1 KEGG: glo:Glov_2384 hypothetical protein; hypothetical protein 843263 8356812 Cpin_0700 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120399.1 842622 R 485918 CDS YP_003120400.1 256419747 8356813 complement(843599..844723) 1 NC_013132.1 PFAM: Radical SAM domain protein; KEGG: dde:Dde_0797 hypothetical protein; radical SAM protein 844723 8356813 Cpin_0701 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003120400.1 843599 R 485918 CDS YP_003120401.1 256419748 8356814 844836..846017 1 NC_013132.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: mxa:MXAN_6280 hypothetical protein; PDZ/DHR/GLGF domain-containing protein 846017 8356814 Cpin_0702 Chitinophaga pinensis DSM 2588 PDZ/DHR/GLGF domain-containing protein YP_003120401.1 844836 D 485918 CDS YP_003120402.1 256419749 8356815 846089..847018 1 NC_013132.1 KEGG: smt:Smal_3810 hypothetical protein; hypothetical protein 847018 8356815 Cpin_0703 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120402.1 846089 D 485918 CDS YP_003120403.1 256419750 8356816 847076..848311 1 NC_013132.1 PFAM: peptidase M16 domain protein; KEGG: ade:Adeh_0102 peptidase M16-like; peptidase M16 domain-containing protein 848311 8356816 Cpin_0704 Chitinophaga pinensis DSM 2588 peptidase M16 domain-containing protein YP_003120403.1 847076 D 485918 CDS YP_003120404.1 256419751 8356817 848372..849655 1 NC_013132.1 PFAM: peptidase M16 domain protein; KEGG: mxa:MXAN_1624 peptidase, M16 (pitrilysin) family; peptidase M16 domain-containing protein 849655 8356817 Cpin_0705 Chitinophaga pinensis DSM 2588 peptidase M16 domain-containing protein YP_003120404.1 848372 D 485918 CDS YP_003120405.1 256419752 8356818 849821..850228 1 NC_013132.1 KEGG: vpa:VP1847 hypothetical protein; hypothetical protein 850228 8356818 Cpin_0706 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120405.1 849821 D 485918 CDS YP_003120406.1 256419753 8356819 complement(850231..851121) 1 NC_013132.1 PFAM: protein of unknown function DUF161; KEGG: gur:Gura_0624 hypothetical protein; hypothetical protein 851121 8356819 Cpin_0707 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120406.1 850231 R 485918 CDS YP_003120407.1 256419754 8356820 complement(851132..852289) 1 NC_013132.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: hypothetical protein; arginase/agmatinase/formiminoglutamase 852289 8356820 Cpin_0708 Chitinophaga pinensis DSM 2588 arginase/agmatinase/formiminoglutamase YP_003120407.1 851132 R 485918 CDS YP_003120408.1 256419755 8356821 complement(852439..852687) 1 NC_013132.1 hypothetical protein 852687 8356821 Cpin_0709 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120408.1 852439 R 485918 CDS YP_003120409.1 256419756 8356822 853069..854175 1 NC_013132.1 PFAM: glycosyltransferase 28 domain; KEGG: lip:LI1104 UDP-N-acetylglucosamine:LPS N- acetylglucosamine transferase; glycosyl transferase family protein 854175 8356822 Cpin_0710 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003120409.1 853069 D 485918 CDS YP_003120410.1 256419757 8356823 complement(854254..854610) 1 NC_013132.1 PFAM: arsenate reductase and related; KEGG: cak:Caul_2487 arsenate reductase and related; arsenate reductase-like protein 854610 8356823 Cpin_0711 Chitinophaga pinensis DSM 2588 arsenate reductase-like protein YP_003120410.1 854254 R 485918 CDS YP_003120411.1 256419758 8356824 854909..857728 1 NC_013132.1 KEGG: pca:Pcar_0592 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease; DNA polymerase I 857728 8356824 Cpin_0712 Chitinophaga pinensis DSM 2588 DNA polymerase I YP_003120411.1 854909 D 485918 CDS YP_003120412.1 256419759 8356825 857962..858480 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmr:Mmar10_2812 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 858480 8356825 Cpin_0713 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003120412.1 857962 D 485918 CDS YP_003120413.1 256419760 8356826 858602..859738 1 NC_013132.1 PFAM: peptidase C1B bleomycin hydrolase; KEGG: bba:Bd1649 aminopeptidase C; peptidase C1B bleomycin hydrolase 859738 8356826 Cpin_0714 Chitinophaga pinensis DSM 2588 peptidase C1B bleomycin hydrolase YP_003120413.1 858602 D 485918 CDS YP_003120414.1 256419761 8356827 complement(859828..860529) 1 NC_013132.1 PFAM: pectate lyase; KEGG: scl:sce4938 pectate lyase; pectate lyase 860529 8356827 Cpin_0715 Chitinophaga pinensis DSM 2588 pectate lyase YP_003120414.1 859828 R 485918 CDS YP_003120415.1 256419762 8356828 complement(861070..861417) 1 NC_013132.1 hypothetical protein 861417 8356828 Cpin_0716 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120415.1 861070 R 485918 CDS YP_003120416.1 256419763 8356829 complement(861439..862056) 1 NC_013132.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: ppw:PputW619_3788 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 862056 8356829 Cpin_0717 Chitinophaga pinensis DSM 2588 Sua5/YciO/YrdC/YwlC family protein YP_003120416.1 861439 R 485918 CDS YP_003120417.1 256419764 8356830 862168..862881 1 NC_013132.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: sfu:Sfum_3374 monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 862881 8356830 Cpin_0718 Chitinophaga pinensis DSM 2588 monofunctional biosynthetic peptidoglycan transglycosylase YP_003120417.1 862168 D 485918 CDS YP_003120418.1 256419765 8356831 complement(862963..863478) 1 NC_013132.1 KEGG: prw:PsycPRwf_1459 ATPase/kinase involved in NAD metabolism-like protein; NAD metabolism ATPase/kinase-like protein 863478 8356831 Cpin_0719 Chitinophaga pinensis DSM 2588 NAD metabolism ATPase/kinase-like protein YP_003120418.1 862963 R 485918 CDS YP_003120419.1 256419766 8356832 complement(863493..864128) 1 NC_013132.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: cps:CPS_0065 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 864128 8356832 Cpin_0720 Chitinophaga pinensis DSM 2588 nicotinamide mononucleotide transporter PnuC YP_003120419.1 863493 R 485918 CDS YP_003120420.1 256419767 8356833 complement(864148..865797) 1 NC_013132.1 KEGG: scl:sce6728 hypothetical protein; hypothetical protein 865797 8356833 Cpin_0721 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120420.1 864148 R 485918 CDS YP_003120421.1 256419768 8356834 complement(865927..866523) 1 NC_013132.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: gbe:GbCGDNIH1_0150 Fe-S cluster assembly protein NFU; nitrogen-fixing NifU domain-containing protein 866523 8356834 Cpin_0722 Chitinophaga pinensis DSM 2588 nitrogen-fixing NifU domain-containing protein YP_003120421.1 865927 R 485918 CDS YP_003120422.1 256419769 8356835 866788..868317 1 NC_013132.1 PFAM: protein of unknown function DUF187; KEGG: bcr:BCAH187_A2557 hypothetical protein; hypothetical protein 868317 8356835 Cpin_0723 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120422.1 866788 D 485918 CDS YP_003120423.1 256419770 8356836 complement(868538..870175) 1 NC_013132.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: cps:CPS_2981 alkaline phosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 870175 8356836 Cpin_0724 Chitinophaga pinensis DSM 2588 type I phosphodiesterase/nucleotide pyrophosphatase YP_003120423.1 868538 R 485918 CDS YP_003120424.1 256419771 8356837 complement(870318..871247) 1 NC_013132.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bbt:BBta_7586 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 871247 8356837 Cpin_0725 Chitinophaga pinensis DSM 2588 glycerophosphoryl diester phosphodiesterase YP_003120424.1 870318 R 485918 CDS YP_003120425.1 256419772 8356838 complement(871321..872064) 1 NC_013132.1 PFAM: major intrinsic protein; KEGG: pha:PSHAb0552 glycerol diffusion channel; major intrinsic protein 872064 8356838 Cpin_0726 Chitinophaga pinensis DSM 2588 major intrinsic protein YP_003120425.1 871321 R 485918 CDS YP_003120426.1 256419773 8356839 complement(872141..873682) 1 NC_013132.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: bph:Bphy_0419 glycerol kinase; glycerol kinase 873682 8356839 Cpin_0727 Chitinophaga pinensis DSM 2588 glycerol kinase YP_003120426.1 872141 R 485918 CDS YP_003120427.1 256419774 8356840 complement(873707..875299) 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; KEGG: gme:Gmet_1677 FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 875299 8356840 Cpin_0728 Chitinophaga pinensis DSM 2588 glycerol-3-phosphate dehydrogenase YP_003120427.1 873707 R 485918 CDS YP_003120428.1 256419775 8356841 875622..876392 1 NC_013132.1 PFAM: regulatory protein DeoR; hypothetical protein; SMART: regulatory protein DeoR; KEGG: sml:Smlt4437 aga operon DeoR family transcriptional repressor; DeoR family transcriptional regulator 876392 8356841 Cpin_0729 Chitinophaga pinensis DSM 2588 DeoR family transcriptional regulator YP_003120428.1 875622 D 485918 CDS YP_003120429.1 256419776 8356842 877157..881686 1 NC_013132.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: vco:VC0395_A1952 glutamate synthase, large subunit; glutamate synthase 881686 8356842 Cpin_0730 Chitinophaga pinensis DSM 2588 glutamate synthase YP_003120429.1 877157 D 485918 CDS YP_003120430.1 256419777 8356843 881720..883195 1 NC_013132.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vpa:VP0483 glutamate synthase subunit beta; glutamate synthase NADH/NADPH small subunit 883195 8356843 Cpin_0731 Chitinophaga pinensis DSM 2588 glutamate synthase NADH/NADPH small subunit YP_003120430.1 881720 D 485918 CDS YP_003120431.1 256419778 8356844 883383..884018 1 NC_013132.1 hypothetical protein 884018 8356844 Cpin_0732 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120431.1 883383 D 485918 CDS YP_003120432.1 256419779 8356845 884054..884668 1 NC_013132.1 hypothetical protein 884668 8356845 Cpin_0733 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120432.1 884054 D 485918 CDS YP_003120433.1 256419780 8356846 884849..889921 1 NC_013132.1 PFAM: protein of unknown function DUF490; KEGG: hap:HAPS_0221 tubulin binding protein; hypothetical protein 889921 8356846 Cpin_0734 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120433.1 884849 D 485918 CDS YP_003120434.1 256419781 8356847 889923..892226 1 NC_013132.1 PFAM: surface antigen (D15); KEGG: vok:COSY_0507 surface antigen family protein; surface antigen (D15) 892226 8356847 Cpin_0735 Chitinophaga pinensis DSM 2588 surface antigen (D15) YP_003120434.1 889923 D 485918 CDS YP_003120435.1 256419782 8356848 892276..892650 1 NC_013132.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pmy:Pmen_0852 rare lipoprotein A; rare lipoprotein A 892650 8356848 Cpin_0736 Chitinophaga pinensis DSM 2588 rare lipoprotein A YP_003120435.1 892276 D 485918 CDS YP_003120436.1 256419783 8356849 complement(892729..893280) 1 NC_013132.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pzu:PHZ_c2654 intracellular protease/amidase; PfpI family intracellular protease 893280 8356849 Cpin_0737 Chitinophaga pinensis DSM 2588 PfpI family intracellular protease YP_003120436.1 892729 R 485918 CDS YP_003120437.1 256419784 8356850 complement(893849..894853) 1 NC_013132.1 hypothetical protein 894853 8356850 Cpin_0738 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120437.1 893849 R 485918 CDS YP_003120438.1 256419785 8356851 895100..896224 1 NC_013132.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: magnesium and cobalt transport protein CorA; K03284 metal ion transporter, MIT family; magnesium and cobalt transport protein CorA 896224 8356851 Cpin_0739 Chitinophaga pinensis DSM 2588 magnesium and cobalt transport protein CorA YP_003120438.1 895100 D 485918 CDS YP_003120439.1 256419786 8356852 complement(896230..896733) 1 NC_013132.1 hypothetical protein 896733 8356852 Cpin_0740 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120439.1 896230 R 485918 CDS YP_003120440.1 256419787 8356853 complement(896879..898987) 1 NC_013132.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: hypothetical protein; PpiC-type peptidyl-prolyl cis-trans isomerase 898987 8356853 Cpin_0741 Chitinophaga pinensis DSM 2588 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003120440.1 896879 R 485918 CDS YP_003120441.1 256419788 8356854 899758..900762 1 NC_013132.1 TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: mxa:MXAN_2603 quinolinate synthetase; quinolinate synthetase complex subunit A 900762 8356854 Cpin_0742 Chitinophaga pinensis DSM 2588 quinolinate synthetase complex subunit A YP_003120441.1 899758 D 485918 CDS YP_003120442.1 256419789 8356855 902405..902581 1 NC_013132.1 hypothetical protein 902581 8356855 Cpin_0743 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120442.1 902405 D 485918 CDS YP_003120443.1 256419790 8356856 complement(902857..902949) 1 NC_013132.1 hypothetical protein 902949 8356856 Cpin_0744 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120443.1 902857 R 485918 CDS YP_003120444.1 256419791 8356857 complement(903414..903653) 1 NC_013132.1 PFAM: FeoA family protein; KEGG: glo:Glov_1786 FeoA family protein; FeoA family protein 903653 8356857 Cpin_0745 Chitinophaga pinensis DSM 2588 FeoA family protein YP_003120444.1 903414 R 485918 CDS YP_003120445.1 256419792 8356858 903840..904262 1 NC_013132.1 PFAM: protein of unknown function UPF0054; KEGG: sun:SUN_1265 metalloprotease; hypothetical protein 904262 8356858 Cpin_0746 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120445.1 903840 D 485918 CDS YP_003120446.1 256419793 8356859 complement(904310..904480) 1 NC_013132.1 hypothetical protein 904480 8356859 Cpin_0747 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120446.1 904310 R 485918 CDS YP_003120447.1 256419794 8356860 905518..905721 1 NC_013132.1 hypothetical protein 905721 8356860 Cpin_0748 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120447.1 905518 D 485918 CDS YP_003120448.1 256419795 8356861 907032..908900 1 NC_013132.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 908900 8356861 Cpin_0749 Chitinophaga pinensis DSM 2588 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_003120448.1 907032 D 485918 CDS YP_003120449.1 256419796 8356862 909539..910669 1 NC_013132.1 KEGG: bvi:Bcep1808_2411 3-carboxymuconate cyclase- like protein; 6-phosphogluconolactonase 910669 8356862 Cpin_0750 Chitinophaga pinensis DSM 2588 6-phosphogluconolactonase YP_003120449.1 909539 D 485918 CDS YP_003120450.1 256419797 8356863 910737..911078 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 911078 8356863 Cpin_0751 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120450.1 910737 D 485918 CDS YP_003120451.1 256419798 8356864 complement(911086..912564) 1 NC_013132.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: bha:BH2858 cardiolipin synthetase; phospholipase D 912564 8356864 Cpin_0752 Chitinophaga pinensis DSM 2588 phospholipase D YP_003120451.1 911086 R 485918 CDS YP_003120452.1 256419799 8356865 912682..917361 1 NC_013132.1 KEGG: eba:ebA5435 DNA/RNA helicase; DNA/RNA helicase 917361 8356865 Cpin_0753 Chitinophaga pinensis DSM 2588 DNA/RNA helicase YP_003120452.1 912682 D 485918 CDS YP_003120453.1 256419800 8356866 complement(917362..918492) 1 NC_013132.1 PFAM: von Willebrand factor A; von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mpo:Mpop_1510 von Willebrand factor A; von Willebrand factor A 918492 8356866 Cpin_0754 Chitinophaga pinensis DSM 2588 von Willebrand factor A YP_003120453.1 917362 R 485918 CDS YP_003120454.1 256419801 8356867 complement(918500..920743) 1 NC_013132.1 KEGG: ecm:EcSMS35_3513 hypothetical protein; hypothetical protein 920743 8356867 Cpin_0755 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120454.1 918500 R 485918 CDS YP_003120455.1 256419802 8356868 complement(920753..921829) 1 NC_013132.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: ecm:EcSMS35_3512 ATPase, AAA family; ATPase AAA 921829 8356868 Cpin_0756 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003120455.1 920753 R 485918 CDS YP_003120456.1 256419803 8356869 complement(921872..923320) 1 NC_013132.1 KEGG: ecm:EcSMS35_3511 hypothetical protein; hypothetical protein 923320 8356869 Cpin_0757 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120456.1 921872 R 485918 CDS YP_003120457.1 256419804 8356870 complement(923326..924630) 1 NC_013132.1 PFAM: zinc finger SWIM domain protein; KEGG: hch:HCH_05567 SWIM Zn-chelating domain- containing protein; zinc finger SWIM domain-containing protein 924630 8356870 Cpin_0758 Chitinophaga pinensis DSM 2588 zinc finger SWIM domain-containing protein YP_003120457.1 923326 R 485918 CDS YP_003120458.1 256419805 8356871 complement(924670..925011) 1 NC_013132.1 hypothetical protein 925011 8356871 Cpin_0759 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120458.1 924670 R 485918 CDS YP_003120459.1 256419806 8356872 complement(925065..926027) 1 NC_013132.1 KEGG: mgm:Mmc1_1599 secreted hydrolase-like protein; hypothetical protein 926027 8356872 Cpin_0760 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120459.1 925065 R 485918 CDS YP_003120460.1 256419807 8356873 complement(926037..927329) 1 NC_013132.1 PFAM: ABC transporter substrate-binding protein; major facilitator superfamily MFS_1; KEGG: rpi:Rpic_3787 general substrate transporter; ABC transporter substrate-binding protein 927329 8356873 Cpin_0761 Chitinophaga pinensis DSM 2588 ABC transporter substrate-binding protein YP_003120460.1 926037 R 485918 CDS YP_003120461.1 256419808 8356874 927408..928082 1 NC_013132.1 KEGG: bce:BC2796 ribose-5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 928082 8356874 Cpin_0762 Chitinophaga pinensis DSM 2588 ribose 5-phosphate isomerase YP_003120461.1 927408 D 485918 CDS YP_003120462.1 256419809 8356875 928101..928667 1 NC_013132.1 PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: afr:AFE_2216 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 928667 8356875 Cpin_0763 Chitinophaga pinensis DSM 2588 isoprenylcysteine carboxyl methyltransferase YP_003120462.1 928101 D 485918 CDS YP_003120463.1 256419810 8356876 928713..929558 1 NC_013132.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: hch:HCH_04507 rhodanese-related sulfurtransferase; rhodanese domain-containing protein 929558 8356876 Cpin_0764 Chitinophaga pinensis DSM 2588 rhodanese domain-containing protein YP_003120463.1 928713 D 485918 CDS YP_003120464.1 256419811 8356877 complement(929632..930753) 1 NC_013132.1 KEGG: glo:Glov_1382 hypothetical protein; hypothetical protein 930753 8356877 Cpin_0765 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120464.1 929632 R 485918 CDS YP_003120465.1 256419812 8356878 complement(930760..931866) 1 NC_013132.1 KEGG: virion core protein (lumpy skin disease virus)-like protein; virion core protein (lumpy skin disease virus)-like protein 931866 8356878 Cpin_0766 Chitinophaga pinensis DSM 2588 virion core protein (lumpy skin disease virus)-like protein YP_003120465.1 930760 R 485918 CDS YP_003120466.1 256419813 8356879 complement(931947..932372) 1 NC_013132.1 hypothetical protein 932372 8356879 Cpin_0767 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120466.1 931947 R 485918 CDS YP_003120467.1 256419814 8356880 complement(932451..934232) 1 NC_013132.1 PFAM: protein of unknown function DUF885; KEGG: slo:Shew_2471 hypothetical protein; hypothetical protein 934232 8356880 Cpin_0768 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120467.1 932451 R 485918 CDS YP_003120468.1 256419815 8356881 complement(934334..935134) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gdi:GDI1376 AraC family transcriptional regulator; AraC family transcriptional regulator 935134 8356881 Cpin_0769 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120468.1 934334 R 485918 CDS YP_003120469.1 256419816 8356882 complement(935269..936024) 1 NC_013132.1 KEGG: mxa:MXAN_1805 hypothetical protein; hypothetical protein 936024 8356882 Cpin_0770 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120469.1 935269 R 485918 CDS YP_003120470.1 256419817 8356883 complement(936121..936945) 1 NC_013132.1 PFAM: integrase catalytic region; KEGG: mgm:Mmc1_2644 integrase, catalytic region; integrase catalytic subunit 936945 8356883 Cpin_0771 Chitinophaga pinensis DSM 2588 integrase catalytic subunit YP_003120470.1 936121 R 485918 CDS YP_003120471.1 256419818 8356884 complement(936978..937295) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: dps:DP1713 transposase; transposase IS3/IS911 family protein 937295 8356884 Cpin_0772 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003120471.1 936978 R 485918 CDS YP_003120472.1 256419819 8356885 complement(937400..938284) 1 NC_013132.1 PFAM: protein of unknown function DUF1130; KEGG: mxa:MXAN_1806 hypothetical protein; hypothetical protein 938284 8356885 Cpin_0773 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120472.1 937400 R 485918 CDS YP_003120473.1 256419820 8356887 complement(938754..939524) 1 NC_013132.1 KEGG: mgm:Mmc1_3073 hypothetical protein; hypothetical protein 939524 8356887 Cpin_0774 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120473.1 938754 R 485918 CDS YP_003120474.1 256419821 8356888 complement(939545..941746) 1 NC_013132.1 KEGG: gbm:Gbem_3690 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP- dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ 941746 8356888 Cpin_0775 Chitinophaga pinensis DSM 2588 ATP-dependent DNA helicase RecQ YP_003120474.1 939545 R 485918 CDS YP_003120475.1 256419822 8356889 942049..943023 1 NC_013132.1 KEGG: ppd:Ppro_0969 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein 943023 8356889 Cpin_0776 Chitinophaga pinensis DSM 2588 KpsF/GutQ family protein YP_003120475.1 942049 D 485918 CDS YP_003120476.1 256419823 8356890 943025..944116 1 NC_013132.1 PFAM: Nucleotidyl transferase; KEGG: mannose-1-phosphate guanylyltransferase; K00971 mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 944116 8356890 Cpin_0777 Chitinophaga pinensis DSM 2588 mannose-1-phosphate guanylyltransferase YP_003120476.1 943025 D 485918 CDS YP_003120477.1 256419824 8356891 944192..945334 1 NC_013132.1 PFAM: aminotransferase class I and II; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bph:Bphy_1981 aminotransferase class I and II; class I and II aminotransferase 945334 8356891 Cpin_0778 Chitinophaga pinensis DSM 2588 class I and II aminotransferase YP_003120477.1 944192 D 485918 CDS YP_003120478.1 256419825 8356892 complement(945560..946240) 1 NC_013132.1 PFAM: carbonic anhydrase; KEGG: neu:NE1926 carbonic anhydrase; carbonic anhydrase 946240 8356892 Cpin_0779 Chitinophaga pinensis DSM 2588 carbonic anhydrase YP_003120478.1 945560 R 485918 CDS YP_003120479.1 256419826 8356893 complement(946292..947938) 1 NC_013132.1 PFAM: sulphate transporter; xanthine/uracil/vitamin C permease; KEGG: neu:NE1927 sulfate transporter; sulfate transporter 947938 8356893 Cpin_0780 Chitinophaga pinensis DSM 2588 sulfate transporter YP_003120479.1 946292 R 485918 CDS YP_003120480.1 256419827 8356894 complement(948155..948445) 1 NC_013132.1 hypothetical protein 948445 8356894 Cpin_0781 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120480.1 948155 R 485918 CDS YP_003120481.1 256419828 8356895 948814..949140 1 NC_013132.1 PFAM: transcriptional regulator PadR family protein; KEGG: sdn:Sden_0473 transcriptional regulator PadR- like protein; PadR family transcriptional regulator 949140 8356895 Cpin_0782 Chitinophaga pinensis DSM 2588 PadR family transcriptional regulator YP_003120481.1 948814 D 485918 CDS YP_003120482.1 256419829 8356896 949188..950993 1 NC_013132.1 PFAM: PspC domain protein; KEGG: cbs:COXBURSA331_A1174 PspC domain-containing protein; phage shock protein C, PspC 950993 8356896 Cpin_0783 Chitinophaga pinensis DSM 2588 phage shock protein C, PspC YP_003120482.1 949188 D 485918 CDS YP_003120483.1 256419830 8356897 951176..953311 1 NC_013132.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; ferrous iron transport B domain protein; KEGG: rpa:RPA4635 ferrous iron transport protein B; ferrous iron transport protein B 953311 8356897 Cpin_0784 Chitinophaga pinensis DSM 2588 ferrous iron transport protein B YP_003120483.1 951176 D 485918 CDS YP_003120484.1 256419831 8356898 953370..954275 1 NC_013132.1 PFAM: peptidase M28; KEGG: cak:Caul_3463 peptidase M28; peptidase M28 954275 8356898 Cpin_0785 Chitinophaga pinensis DSM 2588 peptidase M28 YP_003120484.1 953370 D 485918 CDS YP_003120485.1 256419832 8356899 complement(954215..954889) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 954889 8356899 Cpin_0786 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120485.1 954215 R 485918 CDS YP_003120486.1 256419833 8356900 954954..955958 1 NC_013132.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 955958 paaA 8356900 paaA Chitinophaga pinensis DSM 2588 phenylacetate-CoA oxygenase subunit PaaA YP_003120486.1 954954 D 485918 CDS YP_003120487.1 256419834 8356901 956016..956384 1 NC_013132.1 PFAM: phenylacetic acid degradation B; KEGG: ppw:PputW619_2632 phenylacetate-CoA oxygenase, PaaH subunit; phenylacetic acid degradation B 956384 8356901 Cpin_0788 Chitinophaga pinensis DSM 2588 phenylacetic acid degradation B YP_003120487.1 956016 D 485918 CDS YP_003120488.1 256419835 8356902 956399..957154 1 NC_013132.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: nha:Nham_0930 phenylacetate-CoA oxygenase, PaaI subunit; phenylacetate-CoA oxygenase subunit PaaI 957154 8356902 Cpin_0789 Chitinophaga pinensis DSM 2588 phenylacetate-CoA oxygenase subunit PaaI YP_003120488.1 956399 D 485918 CDS YP_003120489.1 256419836 8356903 957166..957657 1 NC_013132.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: dar:Daro_0380 phenylacetate-CoA oxygenase, PaaJ subunit; phenylacetate-CoA oxygenase subunit PaaJ 957657 8356903 Cpin_0790 Chitinophaga pinensis DSM 2588 phenylacetate-CoA oxygenase subunit PaaJ YP_003120489.1 957166 D 485918 CDS YP_003120490.1 256419837 8356904 957715..958284 1 NC_013132.1 KEGG: gur:Gura_4130 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 958284 8356904 Cpin_0791 Chitinophaga pinensis DSM 2588 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_003120490.1 957715 D 485918 CDS YP_003120491.1 256419838 8356905 complement(958286..959320) 1 NC_013132.1 PFAM: protein of unknown function UPF0118; KEGG: bpt:Bpet2718 hypothetical protein; hypothetical protein 959320 8356905 Cpin_0792 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120491.1 958286 R 485918 CDS YP_003120492.1 256419839 8356906 959579..959776 1 NC_013132.1 hypothetical protein 959776 8356906 Cpin_0793 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120492.1 959579 D 485918 CDS YP_003120493.1 256419840 8356907 959803..960249 1 NC_013132.1 hypothetical protein 960249 8356907 Cpin_0794 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120493.1 959803 D 485918 CDS YP_003120494.1 256419841 8356908 960284..960655 1 NC_013132.1 hypothetical protein 960655 8356908 Cpin_0795 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120494.1 960284 D 485918 CDS YP_003120495.1 256419842 8356909 complement(960671..961696) 1 NC_013132.1 PFAM: Radical SAM domain protein; KEGG: cbg:CbuG_1165 radical SAM superfamily protein; radical SAM protein 961696 8356909 Cpin_0796 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003120495.1 960671 R 485918 CDS YP_003120496.1 256419843 8356910 961819..962586 1 NC_013132.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: efe:EFER_2188 membrane-bound hydrolase; glycoside hydrolase 962586 8356910 Cpin_0797 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003120496.1 961819 D 485918 CDS YP_003120497.1 256419844 8356911 962607..962882 1 NC_013132.1 hypothetical protein 962882 8356911 Cpin_0798 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120497.1 962607 D 485918 CDS YP_003120498.1 256419845 8356912 complement(962965..963177) 1 NC_013132.1 hypothetical protein 963177 8356912 Cpin_0799 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120498.1 962965 R 485918 CDS YP_003120499.1 256419846 8356913 963693..963878 1 NC_013132.1 hypothetical protein 963878 8356913 Cpin_0800 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120499.1 963693 D 485918 CDS YP_003120500.1 256419847 8356914 complement(964004..964426) 1 NC_013132.1 KEGG: shm:Shewmr7_0115 hypothetical protein; hypothetical protein 964426 8356914 Cpin_0801 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120500.1 964004 R 485918 CDS YP_003120501.1 256419848 8356915 964507..965697 1 NC_013132.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: dol:Dole_3203 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 965697 8356915 Cpin_0802 Chitinophaga pinensis DSM 2588 DegT/DnrJ/EryC1/StrS aminotransferase YP_003120501.1 964507 D 485918 CDS YP_003120502.1 256419849 8356916 965707..966435 1 NC_013132.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; KEGG: pca:Pcar_1946 3-deoxy-manno-octulosonate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 966435 8356916 Cpin_0803 Chitinophaga pinensis DSM 2588 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_003120502.1 965707 D 485918 CDS YP_003120503.1 256419850 8356917 966459..967535 1 NC_013132.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dol:Dole_3202 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 967535 8356917 Cpin_0804 Chitinophaga pinensis DSM 2588 iron-containing alcohol dehydrogenase YP_003120503.1 966459 D 485918 CDS YP_003120504.1 256419851 8356918 complement(967619..968845) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: bat:BAS2186 major facilitator family transporter; major facilitator superfamily protein 968845 8356918 Cpin_0805 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003120504.1 967619 R 485918 CDS YP_003120505.1 256419852 8356919 968964..969704 1 NC_013132.1 PFAM: protein of unknown function DUF88; KEGG: cti:RALTA_A2999 hypothetical protein; hypothetical protein 969704 8356919 Cpin_0806 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120505.1 968964 D 485918 CDS YP_003120506.1 256419853 8356920 complement(969769..969912) 1 NC_013132.1 hypothetical protein 969912 8356920 Cpin_0807 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120506.1 969769 R 485918 CDS YP_003120507.1 256419854 8356921 complement(969984..971963) 1 NC_013132.1 PFAM: dehydrogenase E1 component; transketolase domain protein; transketolase central region; KEGG: jan:Jann_3081 dehydrogenase, E1 component; dehydrogenase E1 component 971963 8356921 Cpin_0808 Chitinophaga pinensis DSM 2588 dehydrogenase E1 component YP_003120507.1 969984 R 485918 CDS YP_003120508.1 256419855 8356922 complement(971975..972322) 1 NC_013132.1 PFAM: membrane protein of unknown function; KEGG: gbm:Gbem_2195 membrane protein of unknown function; hypothetical protein 972322 8356922 Cpin_0809 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120508.1 971975 R 485918 CDS YP_003120509.1 256419856 8356923 complement(972371..973303) 1 NC_013132.1 PFAM: xylose isomerase; KEGG: mno:Mnod_3088 hydroxypyruvate isomerase; xylose isomerase 973303 8356923 Cpin_0810 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003120509.1 972371 R 485918 CDS YP_003120510.1 256419857 8356924 973469..974440 1 NC_013132.1 PFAM: protein of unknown function DUF323; KEGG: sus:Acid_6144 hypothetical protein; hypothetical protein 974440 8356924 Cpin_0811 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120510.1 973469 D 485918 CDS YP_003120511.1 256419858 8356925 974524..975861 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_2550 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 975861 8356925 Cpin_0812 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003120511.1 974524 D 485918 CDS YP_003120512.1 256419859 8356926 975944..977266 1 NC_013132.1 PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: aba:Acid345_4495 D-Ala-D-Ala carboxypeptidase. serine peptidase. MEROPS family S13; peptidase S13 D-Ala-D-Ala carboxypeptidase C 977266 8356926 Cpin_0813 Chitinophaga pinensis DSM 2588 peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_003120512.1 975944 D 485918 CDS YP_003120513.1 256419860 8356927 complement(977263..977907) 1 NC_013132.1 hypothetical protein 977907 8356927 Cpin_0814 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120513.1 977263 R 485918 CDS YP_003120514.1 256419861 8356928 complement(978019..979392) 1 NC_013132.1 KEGG: sde:Sde_2844 hypothetical protein; hypothetical protein 979392 8356928 Cpin_0815 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120514.1 978019 R 485918 CDS YP_003120515.1 256419862 8356929 979393..979539 1 NC_013132.1 hypothetical protein 979539 8356929 Cpin_0816 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120515.1 979393 D 485918 CDS YP_003120516.1 256419863 8356930 complement(979515..980960) 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_4241 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 980960 8356930 Cpin_0817 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003120516.1 979515 R 485918 CDS YP_003120517.1 256419864 8356931 complement(981030..981716) 1 NC_013132.1 KEGG: sus:Acid_7383 Tat pathway signal sequence domain-containing protein; hypothetical protein 981716 8356931 Cpin_0818 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120517.1 981030 R 485918 CDS YP_003120518.1 256419865 8356932 complement(981738..983477) 1 NC_013132.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: sus:Acid_7382 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 983477 8356932 Cpin_0819 Chitinophaga pinensis DSM 2588 glucose-methanol-choline oxidoreductase YP_003120518.1 981738 R 485918 CDS YP_003120519.1 256419866 8356933 983582..985051 1 NC_013132.1 PFAM: carbohydrate kinase FGGY; KEGG: sugar kinase; K00851 gluconokinase; carbohydrate kinase FGGY 985051 8356933 Cpin_0820 Chitinophaga pinensis DSM 2588 carbohydrate kinase FGGY YP_003120519.1 983582 D 485918 CDS YP_003120520.1 256419867 8356934 complement(985126..987018) 1 NC_013132.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: pca:Pcar_1304 DNA mismatch repair enzyme; DNA mismatch repair protein MutL 987018 8356934 Cpin_0821 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutL YP_003120520.1 985126 R 485918 CDS YP_003120521.1 256419868 8356935 987349..987813 1 NC_013132.1 KEGG: aba:Acid345_2786 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 987813 8356935 Cpin_0822 Chitinophaga pinensis DSM 2588 methionine-R-sulfoxide reductase YP_003120521.1 987349 D 485918 CDS YP_003120522.1 256419869 8356936 complement(987870..988157) 1 NC_013132.1 PFAM: YCII-related; KEGG: bcy:Bcer98_2373 YCII-related; hypothetical protein 988157 8356936 Cpin_0823 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120522.1 987870 R 485918 CDS YP_003120523.1 256419870 8356937 988423..990198 1 NC_013132.1 hypothetical protein 990198 8356937 Cpin_0824 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120523.1 988423 D 485918 CDS YP_003120524.1 256419871 8356938 990228..990956 1 NC_013132.1 PFAM: ABC transporter related; KEGG: ban:BA2603 ABC transporter, ATP-binding protein; ABC transporter 990956 8356938 Cpin_0825 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120524.1 990228 D 485918 CDS YP_003120525.1 256419872 8356939 990956..992152 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_5698 ABC transporter, permease protein; hypothetical protein 992152 8356939 Cpin_0826 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120525.1 990956 D 485918 CDS YP_003120526.1 256419873 8356940 992186..992488 1 NC_013132.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: swi:Swit_1629 stress responsive alpha-beta barrel domain-containing protein; stress responsive protein 992488 8356940 Cpin_0827 Chitinophaga pinensis DSM 2588 stress responsive protein YP_003120526.1 992186 D 485918 CDS YP_003120527.1 256419874 8356941 complement(992569..995091) 1 NC_013132.1 KEGG: swp:swp_0627 hypothetical protein; hypothetical protein 995091 8356941 Cpin_0828 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120527.1 992569 R 485918 CDS YP_003120528.1 256419875 8356942 complement(995141..996202) 1 NC_013132.1 KEGG: ilo:IL0073 hypothetical protein; hypothetical protein 996202 8356942 Cpin_0829 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120528.1 995141 R 485918 CDS YP_003120529.1 256419876 8356943 complement(996251..997498) 1 NC_013132.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pna:Pnap_1343 geranylgeranyl reductase; geranylgeranyl reductase 997498 8356943 Cpin_0830 Chitinophaga pinensis DSM 2588 geranylgeranyl reductase YP_003120529.1 996251 R 485918 CDS YP_003120530.1 256419877 8356944 997565..997876 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: vsa:VSAL_I1086 hypothetical protein; hypothetical protein 997876 8356944 Cpin_0831 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120530.1 997565 D 485918 CDS YP_003120531.1 256419878 8356946 998108..999247 1 NC_013132.1 SMART: hypothetical protein; KEGG: dol:Dole_2419 hypothetical protein; hypothetical protein 999247 8356946 Cpin_0832 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120531.1 998108 D 485918 CDS YP_003120532.1 256419879 8356947 complement(999213..999878) 1 NC_013132.1 KEGG: pna:Pnap_4852 hypothetical protein; hypothetical protein 999878 8356947 Cpin_0833 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120532.1 999213 R 485918 CDS YP_003120533.1 256419880 8356948 complement(999882..1000637) 1 NC_013132.1 hypothetical protein 1000637 8356948 Cpin_0834 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120533.1 999882 R 485918 CDS YP_003120534.1 256419881 8356949 complement(1000676..1001395) 1 NC_013132.1 hypothetical protein 1001395 8356949 Cpin_0835 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120534.1 1000676 R 485918 CDS YP_003120535.1 256419882 8356950 1001603..1002181 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1002181 8356950 Cpin_0836 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120535.1 1001603 D 485918 CDS YP_003120536.1 256419883 8356951 complement(1002271..1003350) 1 NC_013132.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; KEGG: gsu:GSU3213 GTPase ObgE; GTP-binding protein Obg/CgtA 1003350 8356951 Cpin_0837 Chitinophaga pinensis DSM 2588 GTP-binding protein Obg/CgtA YP_003120536.1 1002271 R 485918 CDS YP_003120537.1 256419884 8356952 complement(1003507..1004094) 1 NC_013132.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; KEGG: sfu:Sfum_1576 adenylate kinases; adenylate kinase 1004094 8356952 Cpin_0838 Chitinophaga pinensis DSM 2588 adenylate kinase YP_003120537.1 1003507 R 485918 CDS YP_003120538.1 256419885 8356953 1004462..1007500 1 NC_013132.1 PFAM: beta-lactamase; glycoside hydrolase family 3 domain protein; KEGG: aba:Acid345_4564 glycoside hydrolase, family 3-like; beta-lactamase 1007500 8356953 Cpin_0839 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003120538.1 1004462 D 485918 CDS YP_003120539.1 256419886 8356954 complement(1007595..1008020) 1 NC_013132.1 hypothetical protein 1008020 8356954 Cpin_0840 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120539.1 1007595 R 485918 CDS YP_003120540.1 256419887 8356955 1008219..1009268 1 NC_013132.1 PFAM: cytochrome oxidase assembly; KEGG: rce:RC1_2704 cytochrome oxidase assembly protein; cytochrome oxidase assembly 1009268 8356955 Cpin_0841 Chitinophaga pinensis DSM 2588 cytochrome oxidase assembly YP_003120540.1 1008219 D 485918 CDS YP_003120541.1 256419888 8356956 1009332..1011584 1 NC_013132.1 KEGG: msl:Msil_0816 hypothetical protein; hypothetical protein 1011584 8356956 Cpin_0842 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120541.1 1009332 D 485918 CDS YP_003120542.1 256419889 8356957 complement(1011589..1012590) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bba:Bd0873 hydrolytic enzyme; alpha/beta hydrolase 1012590 8356957 Cpin_0843 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003120542.1 1011589 R 485918 CDS YP_003120543.1 256419890 8356958 1012951..1014765 1 NC_013132.1 TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: sat:SYN_00939 GTP-binding protein TypA/BipA; GTP-binding protein TypA 1014765 8356958 Cpin_0844 Chitinophaga pinensis DSM 2588 GTP-binding protein TypA YP_003120543.1 1012951 D 485918 CDS YP_003120544.1 256419891 8356959 1014874..1015485 1 NC_013132.1 KEGG: vha:VIBHAR_06700 hypothetical protein; DNA-N1-methyladenine dioxygenase 1015485 8356959 Cpin_0845 Chitinophaga pinensis DSM 2588 DNA-N1-methyladenine dioxygenase YP_003120544.1 1014874 D 485918 CDS YP_003120545.1 256419892 8356960 1015516..1016391 1 NC_013132.1 hypothetical protein 1016391 8356960 Cpin_0846 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120545.1 1015516 D 485918 CDS YP_003120546.1 256419893 8356961 1016448..1016882 1 NC_013132.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pnu:Pnuc_0516 protein of unknown function DUF306, MetA and HslJ; hypothetical protein 1016882 8356961 Cpin_0847 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120546.1 1016448 D 485918 CDS YP_003120547.1 256419894 8356962 complement(1016956..1017312) 1 NC_013132.1 KEGG: similar to Fibrocystin-L precursor (polycystic kidney and hepatic disease 1-like protein 1) (PKHD1-like protein 1); hypothetical protein 1017312 8356962 Cpin_0848 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120547.1 1016956 R 485918 CDS YP_003120548.1 256419895 8356963 complement(1017591..1019747) 1 NC_013132.1 KEGG: xfn:XfasM23_0959 hypothetical protein; hypothetical protein 1019747 8356963 Cpin_0849 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120548.1 1017591 R 485918 CDS YP_003120549.1 256419896 8356964 1019918..1020349 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1020349 8356964 Cpin_0850 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120549.1 1019918 D 485918 CDS YP_003120550.1 256419897 8356965 1020402..1021064 1 NC_013132.1 PFAM: ribonuclease HII/HIII; KEGG: dar:Daro_1756 ribonuclease HII/HIII; ribonuclease H 1021064 8356965 Cpin_0851 Chitinophaga pinensis DSM 2588 ribonuclease H YP_003120550.1 1020402 D 485918 CDS YP_003120551.1 256419898 8356966 1021111..1022604 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: hypothetical protein; RNA polymerase sigma-54 subunit RpoN 1022604 8356966 Cpin_0852 Chitinophaga pinensis DSM 2588 RNA polymerase sigma-54 subunit RpoN YP_003120551.1 1021111 D 485918 CDS YP_003120552.1 256419899 8356967 1022650..1023342 1 NC_013132.1 hypothetical protein 1023342 8356967 Cpin_0853 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120552.1 1022650 D 485918 CDS YP_003120553.1 256419900 8356968 1023624..1024634 1 NC_013132.1 KEGG: gdi:GDI2296 protein RecA (recombinase A); TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recombinase A 1024634 8356968 Cpin_0854 Chitinophaga pinensis DSM 2588 recombinase A YP_003120553.1 1023624 D 485918 CDS YP_003120554.1 256419901 8356969 complement(1025541..1026161) 1 NC_013132.1 PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: aba:Acid345_0702 DNA-3-methyladenine glycosylase II; HhH-GPD family protein 1026161 8356969 Cpin_0855 Chitinophaga pinensis DSM 2588 HhH-GPD family protein YP_003120554.1 1025541 R 485918 CDS YP_003120555.1 256419902 8356970 complement(1026253..1027263) 1 NC_013132.1 PFAM: peptidase M28; KEGG: bra:BRADO0660 aminopeptidase; exported protein; peptidase M28 1027263 8356970 Cpin_0856 Chitinophaga pinensis DSM 2588 peptidase M28 YP_003120555.1 1026253 R 485918 CDS YP_003120556.1 256419903 8356971 complement(1027270..1028769) 1 NC_013132.1 KEGG: ppd:Ppro_0031 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; tRNA synthetase class I (M); cysteinyl-tRNA synthetase 1028769 8356971 Cpin_0857 Chitinophaga pinensis DSM 2588 cysteinyl-tRNA synthetase YP_003120556.1 1027270 R 485918 CDS YP_003120557.1 256419904 8356972 complement(1028848..1029963) 1 NC_013132.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: sat:SYN_02542 hypothetical protein; endonuclease/exonuclease/phosphatase 1029963 8356972 Cpin_0858 Chitinophaga pinensis DSM 2588 endonuclease/exonuclease/phosphatase YP_003120557.1 1028848 R 485918 CDS YP_003120558.1 256419905 8356973 complement(1030012..1031115) 1 NC_013132.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: mxa:MXAN_6651 endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase 1031115 8356973 Cpin_0859 Chitinophaga pinensis DSM 2588 endonuclease/exonuclease/phosphatase YP_003120558.1 1030012 R 485918 CDS YP_003120559.1 256419906 8356974 complement(1031211..1031963) 1 NC_013132.1 PFAM: rhomboid family protein; KEGG: bmj:BMULJ_05605 uncharacterized membrane protein; rhomboid family protein 1031963 8356974 Cpin_0860 Chitinophaga pinensis DSM 2588 rhomboid family protein YP_003120559.1 1031211 R 485918 CDS YP_003120560.1 256419907 8356975 complement(1031982..1032815) 1 NC_013132.1 PFAM: rhomboid family protein; KEGG: aeh:Mlg_2078 rhomboid family protein; rhomboid family protein 1032815 8356975 Cpin_0861 Chitinophaga pinensis DSM 2588 rhomboid family protein YP_003120560.1 1031982 R 485918 CDS YP_003120561.1 256419908 8356976 complement(1032829..1034247) 1 NC_013132.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (uracil-5)-methyltransferase; KEGG: dol:Dole_1585 RNA methyltransferase; TrmA family RNA methyltransferase 1034247 8356976 Cpin_0862 Chitinophaga pinensis DSM 2588 TrmA family RNA methyltransferase YP_003120561.1 1032829 R 485918 CDS YP_003120562.1 256419909 8356977 1034341..1035735 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 1035735 8356977 Cpin_0863 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003120562.1 1034341 D 485918 CDS YP_003120563.1 256419910 8356978 1035854..1036552 1 NC_013132.1 hypothetical protein 1036552 8356978 Cpin_0864 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120563.1 1035854 D 485918 CDS YP_003120564.1 256419911 8356979 1036677..1037294 1 NC_013132.1 hypothetical protein 1037294 8356979 Cpin_0865 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120564.1 1036677 D 485918 CDS YP_003120565.1 256419912 8356980 1037540..1038241 1 NC_013132.1 hypothetical protein 1038241 8356980 Cpin_0866 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120565.1 1037540 D 485918 CDS YP_003120566.1 256419913 8356981 complement(1038525..1039478) 1 NC_013132.1 PFAM: methylenetetrahydrofolate reductase; KEGG: hypothetical protein; methylenetetrahydrofolate reductase 1039478 8356981 Cpin_0867 Chitinophaga pinensis DSM 2588 methylenetetrahydrofolate reductase YP_003120566.1 1038525 R 485918 CDS YP_003120567.1 256419914 8356982 1039690..1040454 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tgr:Tgr7_0727 ABC transporter related; ABC transporter 1040454 8356982 Cpin_0868 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120567.1 1039690 D 485918 CDS YP_003120568.1 256419915 8356983 1040478..1042010 1 NC_013132.1 PFAM: GH3 auxin-responsive promoter; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein; GH3 auxin-responsive promoter 1042010 8356983 Cpin_0869 Chitinophaga pinensis DSM 2588 GH3 auxin-responsive promoter YP_003120568.1 1040478 D 485918 CDS YP_003120569.1 256419916 8356984 1042049..1042798 1 NC_013132.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bsu:BSU15910 beta-ketoacyl-acyl carrier protein reductase; 3-oxoacyl-ACP reductase 1042798 8356984 Cpin_0870 Chitinophaga pinensis DSM 2588 3-oxoacyl-ACP reductase YP_003120569.1 1042049 D 485918 CDS YP_003120570.1 256419917 8356985 complement(1043050..1043940) 1 NC_013132.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: cja:CJA_0344 gluconolactonase precursor; SMP-30/gluconolaconase/LRE domain-containing protein 1043940 8356985 Cpin_0871 Chitinophaga pinensis DSM 2588 SMP-30/gluconolaconase/LRE domain-containing protein YP_003120570.1 1043050 R 485918 CDS YP_003120571.1 256419918 8356986 1044160..1045638 1 NC_013132.1 hypothetical protein 1045638 8356986 Cpin_0872 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120571.1 1044160 D 485918 CDS YP_003120572.1 256419919 8356987 1045661..1046713 1 NC_013132.1 KEGG: cvi:CV_0742 hypothetical protein; hypothetical protein 1046713 8356987 Cpin_0873 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120572.1 1045661 D 485918 CDS YP_003120573.1 256419920 8356988 complement(1046868..1048340) 1 NC_013132.1 PFAM: PSP1 domain protein; KEGG: dal:Dalk_0025 PSP1 domain protein; PSP1 domain-containing protein 1048340 8356988 Cpin_0874 Chitinophaga pinensis DSM 2588 PSP1 domain-containing protein YP_003120573.1 1046868 R 485918 CDS YP_003120574.1 256419921 8356989 complement(1048468..1049607) 1 NC_013132.1 KEGG: glo:Glov_1947 DNA polymerase III, delta prime subunit; DNA polymerase III gamma/tau subunits-like protein 1049607 8356989 Cpin_0875 Chitinophaga pinensis DSM 2588 DNA polymerase III gamma/tau subunits-like protein YP_003120574.1 1048468 R 485918 CDS YP_003120575.1 256419922 8356990 complement(1049617..1050150) 1 NC_013132.1 PFAM: glutathione peroxidase; KEGG: sus:Acid_7250 glutathione peroxidase; peroxiredoxin 1050150 8356990 Cpin_0876 Chitinophaga pinensis DSM 2588 peroxiredoxin YP_003120575.1 1049617 R 485918 CDS YP_003120576.1 256419923 8356991 complement(1050252..1050950) 1 NC_013132.1 KEGG: xau:Xaut_3090 phosphoribosyltransferase; phosphoribosyltransferase 1050950 8356991 Cpin_0877 Chitinophaga pinensis DSM 2588 phosphoribosyltransferase YP_003120576.1 1050252 R 485918 CDS YP_003120577.1 256419924 8356992 complement(1050999..1052372) 1 NC_013132.1 TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; KEGG: bsu:BSU00870 DNA repair protein RadA; DNA repair protein RadA 1052372 8356992 Cpin_0878 Chitinophaga pinensis DSM 2588 DNA repair protein RadA YP_003120577.1 1050999 R 485918 CDS YP_003120578.1 256419925 8356993 1053073..1053762 1 NC_013132.1 PFAM: peptidase membrane zinc metallopeptidase KEGG: bha:BH1677 hypothetical protein; peptidase membrane zinc metallopeptidase 1053762 8356993 Cpin_0879 Chitinophaga pinensis DSM 2588 peptidase membrane zinc metallopeptidase YP_003120578.1 1053073 D 485918 CDS YP_003120579.1 256419926 8356994 1054342..1054785 1 NC_013132.1 TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: csa:Csal_2207 50S ribosomal protein L13; 50S ribosomal protein L13 1054785 8356994 Cpin_0880 Chitinophaga pinensis DSM 2588 50S ribosomal protein L13 YP_003120579.1 1054342 D 485918 CDS YP_003120580.1 256419927 8356995 1054800..1055189 1 NC_013132.1 PFAM: ribosomal protein S9; KEGG: acp:A2cp1_3517 ribosomal protein S9; 30S ribosomal protein S9 1055189 8356995 Cpin_0881 Chitinophaga pinensis DSM 2588 30S ribosomal protein S9 YP_003120580.1 1054800 D 485918 CDS YP_003120581.1 256419928 8356996 1055264..1056286 1 NC_013132.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: mxa:MXAN_5344 ribosomal protein S2; 30S ribosomal protein S2 1056286 8356996 Cpin_0882 Chitinophaga pinensis DSM 2588 30S ribosomal protein S2 YP_003120581.1 1055264 D 485918 CDS YP_003120582.1 256419929 8356997 1056413..1057240 1 NC_013132.1 TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: mca:MCA0568 elongation factor Ts; translation elongation factor Ts 1057240 8356997 Cpin_0883 Chitinophaga pinensis DSM 2588 translation elongation factor Ts YP_003120582.1 1056413 D 485918 CDS YP_003120583.1 256419930 8356998 1057471..1058184 1 NC_013132.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1058184 pyrH 8356998 pyrH Chitinophaga pinensis DSM 2588 uridylate kinase YP_003120583.1 1057471 D 485918 CDS YP_003120584.1 256419931 8356999 complement(1058293..1059378) 1 NC_013132.1 KEGG: hdu:HD0195 hypothetical protein; hypothetical protein 1059378 8356999 Cpin_0885 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120584.1 1058293 R 485918 CDS YP_003120585.1 256419932 8357000 1059507..1060151 1 NC_013132.1 KEGG: bur:Bcep18194_A5900 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; pyridoxamine 5'-phosphate oxidase 1060151 8357000 Cpin_0886 Chitinophaga pinensis DSM 2588 pyridoxamine 5'-phosphate oxidase YP_003120585.1 1059507 D 485918 CDS YP_003120586.1 256419933 8357001 complement(1060301..1060417) 1 NC_013132.1 hypothetical protein 1060417 8357001 Cpin_0887 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120586.1 1060301 R 485918 CDS YP_003120587.1 256419934 8357002 complement(1060572..1060841) 1 NC_013132.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: mfa:Mfla_0016 nucleoid protein HU beta subunit; histone family protein DNA-binding protein 1060841 8357002 Cpin_0888 Chitinophaga pinensis DSM 2588 histone family protein DNA-binding protein YP_003120587.1 1060572 R 485918 CDS YP_003120588.1 256419935 8357003 complement(1061148..1061450) 1 NC_013132.1 KEGG: lpc:LPC_2781 hypothetical protein; hypothetical protein 1061450 8357003 Cpin_0889 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120588.1 1061148 R 485918 CDS YP_003120589.1 256419936 8357004 complement(1061466..1062230) 1 NC_013132.1 KEGG: tgr:Tgr7_0109 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 1062230 8357004 Cpin_0890 Chitinophaga pinensis DSM 2588 exodeoxyribonuclease III Xth YP_003120589.1 1061466 R 485918 CDS YP_003120590.1 256419937 8357005 complement(1062324..1065080) 1 NC_013132.1 KEGG: oan:Oant_0197 methionine synthase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; methionine synthase 1065080 8357005 Cpin_0891 Chitinophaga pinensis DSM 2588 methionine synthase YP_003120590.1 1062324 R 485918 CDS YP_003120591.1 256419938 8357006 complement(1065125..1066144) 1 NC_013132.1 PFAM: homocysteine S-methyltransferase; KEGG: hch:HCH_02542 B12-dependent methionine synthase; homocysteine S-methyltransferase 1066144 8357006 Cpin_0892 Chitinophaga pinensis DSM 2588 homocysteine S-methyltransferase YP_003120591.1 1065125 R 485918 CDS YP_003120592.1 256419939 8357007 1066648..1066857 1 NC_013132.1 hypothetical protein 1066857 8357007 Cpin_0893 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120592.1 1066648 D 485918 CDS YP_003120593.1 256419940 8357008 complement(1067113..1067730) 1 NC_013132.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1067730 recR 8357008 recR Chitinophaga pinensis DSM 2588 recombination protein RecR YP_003120593.1 1067113 R 485918 CDS YP_003120594.1 256419941 8357009 complement(1067803..1069278) 1 NC_013132.1 hypothetical protein 1069278 8357009 Cpin_0895 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120594.1 1067803 R 485918 CDS YP_003120595.1 256419942 8357010 complement(1069383..1072583) 1 NC_013132.1 PFAM: UvrD/REP helicase; KEGG: glo:Glov_1066 UvrD/REP helicase; UvrD/REP helicase 1072583 8357010 Cpin_0896 Chitinophaga pinensis DSM 2588 UvrD/REP helicase YP_003120595.1 1069383 R 485918 CDS YP_003120596.1 256419943 8357011 1072634..1073104 1 NC_013132.1 KEGG: ppd:Ppro_2243 hypothetical protein; hypothetical protein 1073104 8357011 Cpin_0897 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120596.1 1072634 D 485918 CDS YP_003120597.1 256419944 8357012 1073182..1073688 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sus:Acid_7860 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 1073688 8357012 Cpin_0898 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120597.1 1073182 D 485918 CDS YP_003120598.1 256419945 8357013 1073689..1074156 1 NC_013132.1 hypothetical protein 1074156 8357013 Cpin_0899 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120598.1 1073689 D 485918 CDS YP_003120599.1 256419946 8357014 1074366..1074845 1 NC_013132.1 hypothetical protein 1074845 8357014 Cpin_0900 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120599.1 1074366 D 485918 CDS YP_003120600.1 256419947 8357015 1074933..1075430 1 NC_013132.1 hypothetical protein 1075430 8357015 Cpin_0901 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120600.1 1074933 D 485918 CDS YP_003120601.1 256419948 8357016 complement(1075525..1076448) 1 NC_013132.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sus:Acid_6667 LysR family transcriptional regulator; LysR family transcriptional regulator 1076448 8357016 Cpin_0902 Chitinophaga pinensis DSM 2588 LysR family transcriptional regulator YP_003120601.1 1075525 R 485918 CDS YP_003120602.1 256419949 8357017 complement(1076527..1076916) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1076916 8357017 Cpin_0903 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120602.1 1076527 R 485918 CDS YP_003120603.1 256419950 8357018 complement(1077285..1079225) 1 NC_013132.1 KEGG: Os02g0603800; hypothetical protein; K03526 4- hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1079225 8357018 Cpin_0904 Chitinophaga pinensis DSM 2588 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_003120603.1 1077285 R 485918 CDS YP_003120604.1 256419951 8357019 complement(1079277..1080038) 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein; Tetratricopeptide TPR_3; SMART: hypothetical protein; KEGG: tdn:Suden_0657 von Willebrand factor, type A; hypothetical protein 1080038 8357019 Cpin_0905 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120604.1 1079277 R 485918 CDS YP_003120605.1 256419952 8357020 complement(1080035..1081072) 1 NC_013132.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: bba:Bd2793 hypothetical protein; von Willebrand factor type A 1081072 8357020 Cpin_0906 Chitinophaga pinensis DSM 2588 von Willebrand factor type A YP_003120605.1 1080035 R 485918 CDS YP_003120606.1 256419953 8357021 complement(1081601..1082404) 1 NC_013132.1 PFAM: penicillin-binding protein transpeptidase; KEGG: son:SO_0837 beta-lactamase; beta-lactamase 1082404 8357021 Cpin_0907 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003120606.1 1081601 R 485918 CDS YP_003120607.1 256419954 8357022 complement(1082511..1083698) 1 NC_013132.1 KEGG: hypothetical protein; K00639 glycine C- acetyltransferase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; aminotransferase class-III; 2-amino-3-ketobutyrate CoA ligase 1083698 8357022 Cpin_0908 Chitinophaga pinensis DSM 2588 2-amino-3-ketobutyrate CoA ligase YP_003120607.1 1082511 R 485918 CDS YP_003120608.1 256419955 8357023 1084070..1084555 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bar:GBAA1113 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 1084555 8357023 Cpin_0909 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120608.1 1084070 D 485918 CDS YP_003120609.1 256419956 8357024 1084606..1085733 1 NC_013132.1 KEGG: GA26236 gene product from transcript GA26236- RA; hypothetical protein 1085733 8357024 Cpin_0910 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120609.1 1084606 D 485918 CDS YP_003120610.1 256419957 8357025 1085743..1086675 1 NC_013132.1 hypothetical protein 1086675 8357025 Cpin_0911 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120610.1 1085743 D 485918 CDS YP_003120611.1 256419958 8357026 1086706..1086966 1 NC_013132.1 hypothetical protein 1086966 8357026 Cpin_0912 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120611.1 1086706 D 485918 CDS YP_003120612.1 256419959 8357027 1087071..1090019 1 NC_013132.1 PFAM: peptidase M16 domain protein; KEGG: gsu:GSU0927 M16 family peptidase; peptidase M16 domain-containing protein 1090019 8357027 Cpin_0913 Chitinophaga pinensis DSM 2588 peptidase M16 domain-containing protein YP_003120612.1 1087071 D 485918 CDS YP_003120613.1 256419960 8357028 1090184..1090756 1 NC_013132.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: shn:Shewana3_3390 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1090756 8357028 Cpin_0914 Chitinophaga pinensis DSM 2588 ErfK/YbiS/YcfS/YnhG family protein YP_003120613.1 1090184 D 485918 CDS YP_003120614.1 256419961 8357029 complement(1090981..1091925) 1 NC_013132.1 KEGG: net:Neut_2408 esterase/lipase/thioesterase family protein; lysophospholipase 1091925 8357029 Cpin_0915 Chitinophaga pinensis DSM 2588 lysophospholipase YP_003120614.1 1090981 R 485918 CDS YP_003120615.1 256419962 8357030 complement(1091989..1093620) 1 NC_013132.1 hypothetical protein 1093620 8357030 Cpin_0916 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120615.1 1091989 R 485918 CDS YP_003120616.1 256419963 8357031 complement(1093791..1095704) 1 NC_013132.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: tgr:Tgr7_1019 acetate--CoA ligase; acetate/CoA ligase 1095704 8357031 Cpin_0917 Chitinophaga pinensis DSM 2588 acetate/CoA ligase YP_003120616.1 1093791 R 485918 CDS YP_003120617.1 256419964 8357032 complement(1095905..1096204) 1 NC_013132.1 hypothetical protein 1096204 8357032 Cpin_0918 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120617.1 1095905 R 485918 CDS YP_003120618.1 256419965 8357033 1096599..1097222 1 NC_013132.1 SMART: helix-turn-helix domain protein; KEGG: hit:NTHI1517 hypothetical protein; XRE family transcriptional regulator 1097222 8357033 Cpin_0919 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003120618.1 1096599 D 485918 CDS YP_003120619.1 256419966 8357034 1097392..1097841 1 NC_013132.1 hypothetical protein 1097841 8357034 Cpin_0920 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120619.1 1097392 D 485918 CDS YP_003120620.1 256419967 8357035 complement(1097833..1098354) 1 NC_013132.1 PFAM: 5 nucleotidase deoxy cytosolic type C; KEGG: eta:ETA_22130 5'(3')-deoxyribonucleotidase; 5' nucleotidase 1098354 8357035 Cpin_0921 Chitinophaga pinensis DSM 2588 5' nucleotidase YP_003120620.1 1097833 R 485918 CDS YP_003120621.1 256419968 8357036 1098449..1099195 1 NC_013132.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: scl:sce4004 DeoR family transcriptional regulator; DeoR family transcriptional regulator 1099195 8357036 Cpin_0922 Chitinophaga pinensis DSM 2588 DeoR family transcriptional regulator YP_003120621.1 1098449 D 485918 CDS YP_003120622.1 256419969 8357037 1099246..1100403 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_3360 major facilitator transporter; major facilitator superfamily protein 1100403 8357037 Cpin_0923 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003120622.1 1099246 D 485918 CDS YP_003120623.1 256419970 8357038 complement(1100489..1101562) 1 NC_013132.1 hypothetical protein 1101562 8357038 Cpin_0924 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120623.1 1100489 R 485918 CDS YP_003120624.1 256419971 8357039 1102163..1104982 1 NC_013132.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1104982 carB 8357039 carB Chitinophaga pinensis DSM 2588 carbamoyl phosphate synthase large subunit YP_003120624.1 1102163 D 485918 CDS YP_003120625.1 256419972 8357040 complement(1105086..1108313) 1 NC_013132.1 PFAM: peptidase S41; hypothetical protein; SMART: peptidase S41; KEGG: sus:Acid_3719 peptidase S41; peptidase S41 1108313 8357040 Cpin_0926 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003120625.1 1105086 R 485918 CDS YP_003120626.1 256419973 8357041 1109102..1111186 1 NC_013132.1 TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: dol:Dole_0767 DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-like protein 1111186 8357041 Cpin_0927 Chitinophaga pinensis DSM 2588 ComEC/Rec2-like protein YP_003120626.1 1109102 D 485918 CDS YP_003120627.1 256419974 8357042 1111199..1112710 1 NC_013132.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1112710 purH 8357042 purH Chitinophaga pinensis DSM 2588 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_003120627.1 1111199 D 485918 CDS YP_003120628.1 256419975 8357043 1112803..1113381 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pha:PSHAa2438 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 1113381 8357043 Cpin_0929 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120628.1 1112803 D 485918 CDS YP_003120629.1 256419976 8357044 1113395..1114735 1 NC_013132.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: CG30494; TonB family protein 1114735 8357044 Cpin_0930 Chitinophaga pinensis DSM 2588 TonB family protein YP_003120629.1 1113395 D 485918 CDS YP_003120630.1 256419977 8357045 complement(1114745..1114945) 1 NC_013132.1 KEGG: azc:AZC_0471 hypothetical protein; hypothetical protein 1114945 8357045 Cpin_0931 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120630.1 1114745 R 485918 CDS YP_003120631.1 256419978 8357046 complement(1114958..1116334) 1 NC_013132.1 PFAM: protein of unknown function DUF162; KEGG: aba:Acid345_2721 iron-sulfur cluster binding protein; hypothetical protein 1116334 8357046 Cpin_0932 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120631.1 1114958 R 485918 CDS YP_003120632.1 256419979 8357047 complement(1116471..1117046) 1 NC_013132.1 hypothetical protein 1117046 8357047 Cpin_0933 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120632.1 1116471 R 485918 CDS YP_003120633.1 256419980 8357048 complement(1117135..1117737) 1 NC_013132.1 hypothetical protein 1117737 8357048 Cpin_0934 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120633.1 1117135 R 485918 CDS YP_003120634.1 256419981 8357049 complement(1117768..1119162) 1 NC_013132.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: wbm:Wbm0070 Mg2+/Co2+ transporter; hypothetical protein 1119162 8357049 Cpin_0935 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120634.1 1117768 R 485918 CDS YP_003120635.1 256419982 8357050 complement(1119298..1119753) 1 NC_013132.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: afr:AFE_1260 single-strand binding protein; single-strand binding protein 1119753 8357050 Cpin_0936 Chitinophaga pinensis DSM 2588 single-strand binding protein YP_003120635.1 1119298 R 485918 CDS YP_003120636.1 256419983 8357051 complement(1119936..1121000) 1 NC_013132.1 KEGG: bcy:Bcer98_0443 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; A/G-specific adenine glycosylase 1121000 8357051 Cpin_0937 Chitinophaga pinensis DSM 2588 A/G-specific adenine glycosylase YP_003120636.1 1119936 R 485918 CDS YP_003120637.1 256419984 8357052 1121574..1121861 1 NC_013132.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: sus:Acid_4299 histone family protein DNA- binding protein; histone family protein DNA-binding protein 1121861 8357052 Cpin_0938 Chitinophaga pinensis DSM 2588 histone family protein DNA-binding protein YP_003120637.1 1121574 D 485918 CDS YP_003120638.1 256419985 8357053 1121864..1122727 1 NC_013132.1 KEGG: sat:SYN_01095 hypothetical protein; hypothetical protein 1122727 8357053 Cpin_0939 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120638.1 1121864 D 485918 CDS YP_003120639.1 256419986 8357054 1123164..1124714 1 NC_013132.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: pca:Pcar_2584 RNase EG; Rne/Rng family ribonuclease 1124714 8357054 Cpin_0940 Chitinophaga pinensis DSM 2588 Rne/Rng family ribonuclease YP_003120639.1 1123164 D 485918 CDS YP_003120640.1 256419987 8357055 1124869..1126518 1 NC_013132.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding domain 1 protein; KEGG: rce:RC1_2426 peptidoglycan binding domain protein; ErfK/YbiS/YcfS/YnhG family protein 1126518 8357055 Cpin_0941 Chitinophaga pinensis DSM 2588 ErfK/YbiS/YcfS/YnhG family protein YP_003120640.1 1124869 D 485918 CDS YP_003120641.1 256419988 8357056 complement(1126563..1126949) 1 NC_013132.1 TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: bba:Bd1766 translation initiation inhibitor; endoribonuclease L-PSP 1126949 8357056 Cpin_0942 Chitinophaga pinensis DSM 2588 endoribonuclease L-PSP YP_003120641.1 1126563 R 485918 CDS YP_003120642.1 256419989 8357057 1127005..1127682 1 NC_013132.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_C0888 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase 1127682 8357057 Cpin_0943 Chitinophaga pinensis DSM 2588 3-hydroxyacyl-CoA dehydrogenase YP_003120642.1 1127005 D 485918 CDS YP_003120643.1 256419990 8357058 1127702..1128379 1 NC_013132.1 PFAM: peptidase M22 glycoprotease; KEGG: peptidase M22 glycoprotease; peptidase M22 glycoprotease 1128379 8357058 Cpin_0944 Chitinophaga pinensis DSM 2588 peptidase M22 glycoprotease YP_003120643.1 1127702 D 485918 CDS YP_003120644.1 256419991 8357059 1128673..1129032 1 NC_013132.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: vvy:VV0683 transcriptional activator; ArsR family transcriptional regulator 1129032 8357059 Cpin_0945 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003120644.1 1128673 D 485918 CDS YP_003120645.1 256419992 8357060 1129272..1130675 1 NC_013132.1 PFAM: beta-lactamase domain protein; rhodanese domain protein; SMART: rhodanese domain protein; KEGG: metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 1130675 8357060 Cpin_0946 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003120645.1 1129272 D 485918 CDS YP_003120646.1 256419993 8357061 1130773..1131582 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: acr:Acry_3136 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1131582 8357061 Cpin_0947 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003120646.1 1130773 D 485918 CDS YP_003120647.1 256419994 8357062 1131656..1131988 1 NC_013132.1 PFAM: transport-associated; KEGG: nar:Saro_3315 transport-associated; transport-associated 1131988 8357062 Cpin_0948 Chitinophaga pinensis DSM 2588 transport-associated YP_003120647.1 1131656 D 485918 CDS YP_003120648.1 256419995 8357063 complement(1132047..1132904) 1 NC_013132.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: dol:Dole_1445 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 1132904 8357063 Cpin_0949 Chitinophaga pinensis DSM 2588 lipid A biosynthesis acyltransferase YP_003120648.1 1132047 R 485918 CDS YP_003120649.1 256419996 8357064 complement(1132916..1134514) 1 NC_013132.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sat:SYN_00424 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; L-aspartate oxidase 1134514 8357064 Cpin_0950 Chitinophaga pinensis DSM 2588 L-aspartate oxidase YP_003120649.1 1132916 R 485918 CDS YP_003120650.1 256419997 8357065 complement(1134575..1135273) 1 NC_013132.1 PFAM: YhhN family protein; KEGG: pat:Patl_3847 YhhN-like; hypothetical protein 1135273 8357065 Cpin_0951 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120650.1 1134575 R 485918 CDS YP_003120651.1 256419998 8357066 complement(1135322..1136659) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sde:Sde_0326 response regulator receiver domain-containing protein; PAS/PAC sensor signal transduction histidine kinase 1136659 8357066 Cpin_0952 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003120651.1 1135322 R 485918 CDS YP_003120652.1 256419999 8357067 complement(1136669..1138021) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: cps:CPS_4704 sigma-54 dependent DNA-binding response regulator; Fis family transcriptional regulator 1138021 8357067 Cpin_0953 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003120652.1 1136669 R 485918 CDS YP_003120653.1 256420000 8357068 1138310..1139557 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sde:Sde_0328 ABC transporter permease; RND family efflux transporter MFP subunit 1139557 8357068 Cpin_0954 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003120653.1 1138310 D 485918 CDS YP_003120654.1 256420001 8357069 1139652..1142051 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 1142051 8357069 Cpin_0955 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120654.1 1139652 D 485918 CDS YP_003120655.1 256420002 8357070 1142091..1142780 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_4701 ABC transporter, ATP-binding protein; ABC transporter 1142780 8357070 Cpin_0956 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120655.1 1142091 D 485918 CDS YP_003120656.1 256420003 8357071 1142825..1145182 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 1145182 8357071 Cpin_0957 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120656.1 1142825 D 485918 CDS YP_003120657.1 256420004 8357072 1145205..1147598 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 1147598 8357072 Cpin_0958 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120657.1 1145205 D 485918 CDS YP_003120658.1 256420005 8357073 1147700..1150042 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_3505 ABC transporter, permease protein; hypothetical protein 1150042 8357073 Cpin_0959 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120658.1 1147700 D 485918 CDS YP_003120659.1 256420006 8357074 1150074..1152485 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 1152485 8357074 Cpin_0960 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120659.1 1150074 D 485918 CDS YP_003120660.1 256420007 8357075 1152489..1153151 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_7144 ABC transporter, ATP-binding protein; ABC transporter 1153151 8357075 Cpin_0961 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120660.1 1152489 D 485918 CDS YP_003120661.1 256420008 8357076 1153285..1154679 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: dal:Dalk_4861 outer membrane efflux protein; outer membrane efflux protein 1154679 8357076 Cpin_0962 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003120661.1 1153285 D 485918 CDS YP_003120662.1 256420009 8357077 1154712..1156067 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_3323 secretion protein HlyD; RND family efflux transporter MFP subunit 1156067 8357077 Cpin_0963 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003120662.1 1154712 D 485918 CDS YP_003120663.1 256420010 8357078 1156418..1156705 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1156705 8357078 Cpin_0964 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120663.1 1156418 D 485918 CDS YP_003120664.1 256420011 8357079 1156827..1158869 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: pat:Patl_0130 alpha-1,2-mannosidase; alpha-1,2-mannosidase 1158869 8357079 Cpin_0965 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003120664.1 1156827 D 485918 CDS YP_003120665.1 256420012 8357080 1159235..1160257 1 NC_013132.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bsu:BSU22830 NAD(P)H-dependent glycerol-3- phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase 1160257 8357080 Cpin_0966 Chitinophaga pinensis DSM 2588 glycerol-3-phosphate dehydrogenase YP_003120665.1 1159235 D 485918 CDS YP_003120666.1 256420013 8357081 1160348..1163629 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor 1163629 8357081 Cpin_0967 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003120666.1 1160348 D 485918 CDS YP_003120667.1 256420014 8357082 1163650..1165164 1 NC_013132.1 hypothetical protein 1165164 8357082 Cpin_0968 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120667.1 1163650 D 485918 CDS YP_003120668.1 256420015 8357083 complement(1165218..1165574) 1 NC_013132.1 KEGG: mxa:MXAN_6481 hypothetical protein; hypothetical protein 1165574 8357083 Cpin_0969 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120668.1 1165218 R 485918 CDS YP_003120669.1 256420016 8357084 complement(1165605..1166915) 1 NC_013132.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: bba:Bd1394 ATP-dependent RNA helicase DbpA; DEAD/DEAH box helicase 1166915 8357084 Cpin_0970 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003120669.1 1165605 R 485918 CDS YP_003120670.1 256420017 8357085 complement(1166951..1168099) 1 NC_013132.1 PFAM: FecR protein; KEGG: abn:AB57_0986 transmembrane sensor protein FecR; anti-FecI sigma factor FecR 1168099 8357085 Cpin_0971 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003120670.1 1166951 R 485918 CDS YP_003120671.1 256420018 8357086 complement(1168166..1168714) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: abu:Abu_2165 ECF subfamily RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 1168714 8357086 Cpin_0972 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120671.1 1168166 R 485918 CDS YP_003120672.1 256420019 8357087 1169115..1172444 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 1172444 8357087 Cpin_0973 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120672.1 1169115 D 485918 CDS YP_003120673.1 256420020 8357088 1172472..1173860 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 1173860 8357088 Cpin_0974 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003120673.1 1172472 D 485918 CDS YP_003120674.1 256420021 8357089 1173923..1176472 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: shn:Shewana3_1086 metallophosphoesterase; metallophosphoesterase 1176472 8357089 Cpin_0975 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003120674.1 1173923 D 485918 CDS YP_003120675.1 256420022 8357090 1176654..1176965 1 NC_013132.1 hypothetical protein 1176965 8357090 Cpin_0976 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120675.1 1176654 D 485918 CDS YP_003120676.1 256420023 8357091 1177051..1177575 1 NC_013132.1 hypothetical protein 1177575 8357091 Cpin_0977 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120676.1 1177051 D 485918 CDS YP_003120677.1 256420024 8357092 1177591..1178460 1 NC_013132.1 KEGG: swd:Swoo_1374 metallophosphoesterase; hypothetical protein 1178460 8357092 Cpin_0978 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120677.1 1177591 D 485918 CDS YP_003120678.1 256420025 8357093 1179035..1179373 1 NC_013132.1 hypothetical protein 1179373 8357093 Cpin_0979 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120678.1 1179035 D 485918 CDS YP_003120679.1 256420026 8357094 1179740..1180912 1 NC_013132.1 hypothetical protein 1180912 8357094 Cpin_0980 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120679.1 1179740 D 485918 CDS YP_003120680.1 256420027 8357095 1180934..1182088 1 NC_013132.1 hypothetical protein 1182088 8357095 Cpin_0981 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120680.1 1180934 D 485918 CDS YP_003120681.1 256420028 8357096 complement(1182230..1184338) 1 NC_013132.1 PFAM: tyrosine protein kinase; lanthionine synthetase C family protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: hypothetical protein; serine/threonine protein kinase 1184338 8357096 Cpin_0982 Chitinophaga pinensis DSM 2588 serine/threonine protein kinase YP_003120681.1 1182230 R 485918 CDS YP_003120682.1 256420029 8357097 complement(1184387..1184638) 1 NC_013132.1 hypothetical protein 1184638 8357097 Cpin_0983 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120682.1 1184387 R 485918 CDS YP_003120683.1 256420030 8357098 complement(1185176..1185928) 1 NC_013132.1 hypothetical protein 1185928 8357098 Cpin_0984 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120683.1 1185176 R 485918 CDS YP_003120684.1 256420031 8357099 complement(1185996..1186976) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4561 transcriptional regulator, AraC family; AraC family transcriptional regulator 1186976 8357099 Cpin_0985 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120684.1 1185996 R 485918 CDS YP_003120685.1 256420032 8357100 1187632..1188063 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: aci:ACIAD0258 type 4 fimbriae expression regulatory protein; response regulator receiver protein 1188063 8357100 Cpin_0986 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003120685.1 1187632 D 485918 CDS YP_003120686.1 256420033 8357101 1188122..1189591 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: aba:Acid345_2604 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator 1189591 8357101 Cpin_0987 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003120686.1 1188122 D 485918 CDS YP_003120687.1 256420034 8357102 1189706..1190188 1 NC_013132.1 PFAM: protein of unknown function DUF1452; KEGG: reh:H16_B2344 hypothetical protein; hypothetical protein 1190188 8357102 Cpin_0988 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120687.1 1189706 D 485918 CDS YP_003120688.1 256420035 8357103 complement(1190278..1191711) 1 NC_013132.1 KEGG: sfu:Sfum_0828 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein; multi-sensor signal transduction histidine kinase 1191711 8357103 Cpin_0989 Chitinophaga pinensis DSM 2588 multi-sensor signal transduction histidine kinase YP_003120688.1 1190278 R 485918 CDS YP_003120689.1 256420036 8357104 complement(1191715..1192170) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pha:PSHAa2395 two-component response regulator; response regulator receiver protein 1192170 8357104 Cpin_0990 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003120689.1 1191715 R 485918 CDS YP_003120690.1 256420037 8357105 complement(1192163..1193551) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: hch:HCH_04931 signal transduction histidine kinase; histidine kinase 1193551 8357105 Cpin_0991 Chitinophaga pinensis DSM 2588 histidine kinase YP_003120690.1 1192163 R 485918 CDS YP_003120691.1 256420038 8357106 1194005..1194346 1 NC_013132.1 KEGG: gdi:GDI0805 hypothetical protein; hypothetical protein 1194346 8357106 Cpin_0992 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120691.1 1194005 D 485918 CDS YP_003120692.1 256420039 8357107 1194378..1195031 1 NC_013132.1 PFAM: protein of unknown function DUF892; KEGG: azc:AZC_2285 hypothetical protein; hypothetical protein 1195031 8357107 Cpin_0993 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120692.1 1194378 D 485918 CDS YP_003120693.1 256420040 8357108 1195107..1195973 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azo:azo1732 short-chain dehydrogenase family protein; short-chain dehydrogenase/reductase SDR 1195973 8357108 Cpin_0994 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003120693.1 1195107 D 485918 CDS YP_003120694.1 256420041 8357109 1195990..1197051 1 NC_013132.1 KEGG: mfa:Mfla_0558 DNA topoisomerase, type I; DNA topoisomerase 1197051 8357109 Cpin_0995 Chitinophaga pinensis DSM 2588 DNA topoisomerase YP_003120694.1 1195990 D 485918 CDS YP_003120695.1 256420042 8357110 complement(1197139..1197486) 1 NC_013132.1 hypothetical protein 1197486 8357110 Cpin_0996 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120695.1 1197139 R 485918 CDS YP_003120696.1 256420043 8357111 1197580..1198374 1 NC_013132.1 KEGG: gbm:Gbem_0141 Ku protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein 1198374 8357111 Cpin_0997 Chitinophaga pinensis DSM 2588 Ku protein YP_003120696.1 1197580 D 485918 CDS YP_003120697.1 256420044 8357112 1198371..1200956 1 NC_013132.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; ATP dependent DNA ligase domain protein; KEGG: gbm:Gbem_0128 DNA ligase D; DNA ligase D 1200956 8357112 Cpin_0998 Chitinophaga pinensis DSM 2588 DNA ligase D YP_003120697.1 1198371 D 485918 CDS YP_003120698.1 256420045 8357113 1201012..1201455 1 NC_013132.1 hypothetical protein 1201455 8357113 Cpin_0999 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120698.1 1201012 D 485918 CDS YP_003120699.1 256420046 8357114 complement(1201457..1202650) 1 NC_013132.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bca:BCE_5316 chromate ion transporter; chromate transporter 1202650 8357114 Cpin_1000 Chitinophaga pinensis DSM 2588 chromate transporter YP_003120699.1 1201457 R 485918 CDS YP_003120700.1 256420047 8357115 1202871..1203908 1 NC_013132.1 PFAM: protein of unknown function DUF900 hydrolase family protein; hypothetical protein 1203908 8357115 Cpin_1001 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120700.1 1202871 D 485918 CDS YP_003120701.1 256420048 8357116 complement(1203980..1204936) 1 NC_013132.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: xca:xccb100_1624 2OG-Fe(II) oxygenase superfamily protein; 2OG-Fe(II) oxygenase 1204936 8357116 Cpin_1002 Chitinophaga pinensis DSM 2588 2OG-Fe(II) oxygenase YP_003120701.1 1203980 R 485918 CDS YP_003120702.1 256420049 8357117 complement(1204967..1205497) 1 NC_013132.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: sde:Sde_2060 GTP cyclohydrolase I; biopolymer transport protein ExbD/TolR 1205497 8357117 Cpin_1003 Chitinophaga pinensis DSM 2588 biopolymer transport protein ExbD/TolR YP_003120702.1 1204967 R 485918 CDS YP_003120703.1 256420050 8357118 complement(1205794..1207233) 1 NC_013132.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1207233 asnC 8357118 asnC Chitinophaga pinensis DSM 2588 asparaginyl-tRNA synthetase YP_003120703.1 1205794 R 485918 CDS YP_003120704.1 256420051 8357119 1207715..1209445 1 NC_013132.1 KEGG: gbm:Gbem_3713 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; ribonuclease B OB region domain; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho 1209445 8357119 Cpin_1005 Chitinophaga pinensis DSM 2588 transcription termination factor Rho YP_003120704.1 1207715 D 485918 CDS YP_003120705.1 256420052 8357120 complement(1209487..1210242) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: eli:ELI_12660 two-component response regulator; LytTR family two component transcriptional regulator 1210242 8357120 Cpin_1006 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003120705.1 1209487 R 485918 CDS YP_003120706.1 256420053 8357121 complement(1210267..1212321) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: hypothetical protein; signal transduction histidine kinase LytS 1212321 8357121 Cpin_1007 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003120706.1 1210267 R 485918 CDS YP_003120707.1 256420054 8357122 complement(1212366..1212596) 1 NC_013132.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rpa:RPA0404 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase 1212596 8357122 Cpin_1008 Chitinophaga pinensis DSM 2588 transcriptional coactivator/pterin dehydratase YP_003120707.1 1212366 R 485918 CDS YP_003120708.1 256420055 8357123 complement(1212672..1213115) 1 NC_013132.1 hypothetical protein 1213115 8357123 Cpin_1009 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120708.1 1212672 R 485918 CDS YP_003120709.1 256420056 8357124 complement(1213311..1213511) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1213511 8357124 Cpin_1010 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120709.1 1213311 R 485918 CDS YP_003120710.1 256420057 8357125 complement(1213483..1214190) 1 NC_013132.1 PFAM: methyltransferase; KEGG: bha:BH3261 hypothetical protein; tRNA (guanine-N(7)-)-methyltransferase 1214190 8357125 Cpin_1011 Chitinophaga pinensis DSM 2588 tRNA (guanine-N(7)-)-methyltransferase YP_003120710.1 1213483 R 485918 CDS YP_003120711.1 256420058 8357126 1214672..1215139 1 NC_013132.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eta:ETA_00020 AsnC-family transcriptional regulator; AsnC family transcriptional regulator 1215139 8357126 Cpin_1012 Chitinophaga pinensis DSM 2588 AsnC family transcriptional regulator YP_003120711.1 1214672 D 485918 CDS YP_003120712.1 256420059 8357127 1215231..1216157 1 NC_013132.1 KEGG: sit:TM1040_2226 tryptophan 2,3-dioxygenase; Tryptophan 2 3-dioxygenase (vermilion)-like protein 1216157 8357127 Cpin_1013 Chitinophaga pinensis DSM 2588 Tryptophan 2 3-dioxygenase (vermilion)-like protein YP_003120712.1 1215231 D 485918 CDS YP_003120713.1 256420060 8357128 1216537..1217262 1 NC_013132.1 KEGG: PHD Zn finger-containing protein; hypothetical protein 1217262 8357128 Cpin_1014 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120713.1 1216537 D 485918 CDS YP_003120714.1 256420061 8357129 1217259..1218572 1 NC_013132.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1218572 8357129 Cpin_1015 Chitinophaga pinensis DSM 2588 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003120714.1 1217259 D 485918 CDS YP_003120715.1 256420062 8357130 1218701..1219267 1 NC_013132.1 KEGG: YALI0C16434p; K00942 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; guanylate kinase 1219267 8357130 Cpin_1016 Chitinophaga pinensis DSM 2588 guanylate kinase YP_003120715.1 1218701 D 485918 CDS YP_003120716.1 256420063 8357131 1219350..1220615 1 NC_013132.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ppd:Ppro_0762 hypothetical protein; hypothetical protein 1220615 8357131 Cpin_1017 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120716.1 1219350 D 485918 CDS YP_003120717.1 256420064 8357132 1221377..1222228 1 NC_013132.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bha:BH0553 hypothetical protein; Sec-independent protein translocase subunit TatC 1222228 8357132 Cpin_1018 Chitinophaga pinensis DSM 2588 Sec-independent protein translocase subunit TatC YP_003120717.1 1221377 D 485918 CDS YP_003120718.1 256420065 8357133 1222333..1222794 1 NC_013132.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase; KEGG: sat:SYN_02366 ribose 5-phosphate isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 1222794 8357133 Cpin_1019 Chitinophaga pinensis DSM 2588 RpiB/LacA/LacB family sugar-phosphate isomerase YP_003120718.1 1222333 D 485918 CDS YP_003120719.1 256420066 8357134 1223523..1224023 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ank:AnaeK_1486 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 1224023 8357134 Cpin_1020 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120719.1 1223523 D 485918 CDS YP_003120720.1 256420067 8357135 1224153..1226504 1 NC_013132.1 PFAM: UvrD/REP helicase; KEGG: bha:BH0648 ATP-dependent DNA helicase; UvrD/REP helicase 1226504 8357135 Cpin_1021 Chitinophaga pinensis DSM 2588 UvrD/REP helicase YP_003120720.1 1224153 D 485918 CDS YP_003120721.1 256420068 8357136 1226571..1227032 1 NC_013132.1 PFAM: regulatory protein RecX; KEGG: bcy:Bcer98_0437 recombination regulator RecX; regulatory protein RecX 1227032 8357136 Cpin_1022 Chitinophaga pinensis DSM 2588 regulatory protein RecX YP_003120721.1 1226571 D 485918 CDS YP_003120722.1 256420069 8357137 1227223..1228017 1 NC_013132.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: csa:Csal_1951 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 1228017 8357137 Cpin_1023 Chitinophaga pinensis DSM 2588 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003120722.1 1227223 D 485918 CDS YP_003120723.1 256420070 8357138 1228017..1228400 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bsu:BSU37020 hypothetical protein; bleomycin resistance protein 1228400 8357138 Cpin_1024 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003120723.1 1228017 D 485918 CDS YP_003120724.1 256420071 8357139 1228470..1229576 1 NC_013132.1 KEGG: vpa:VP0829 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 1229576 8357139 Cpin_1025 Chitinophaga pinensis DSM 2588 N-acetylglucosamine-6-phosphate deacetylase YP_003120724.1 1228470 D 485918 CDS YP_003120725.1 256420072 8357140 1229598..1231271 1 NC_013132.1 KEGG: bba:Bd3831 hypothetical protein; 4-amino-4-deoxy-L-arabinose transferase 1231271 8357140 Cpin_1026 Chitinophaga pinensis DSM 2588 4-amino-4-deoxy-L-arabinose transferase YP_003120725.1 1229598 D 485918 CDS YP_003120726.1 256420073 8357141 complement(1231571..1232605) 1 NC_013132.1 KEGG: gur:Gura_0692 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase 1232605 8357141 Cpin_1027 Chitinophaga pinensis DSM 2588 thiamine-monophosphate kinase YP_003120726.1 1231571 R 485918 CDS YP_003120727.1 256420074 8357142 complement(1232618..1233427) 1 NC_013132.1 PFAM: inositol monophosphatase; KEGG: sat:SYN_00928 myo-inositol-1(or 4)- monophosphatase; inositol monophosphatase 1233427 8357142 Cpin_1028 Chitinophaga pinensis DSM 2588 inositol monophosphatase YP_003120727.1 1232618 R 485918 CDS YP_003120728.1 256420075 8357143 1233549..1235081 1 NC_013132.1 PFAM: GH3 auxin-responsive promoter; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein; GH3 auxin-responsive promoter 1235081 8357143 Cpin_1029 Chitinophaga pinensis DSM 2588 GH3 auxin-responsive promoter YP_003120728.1 1233549 D 485918 CDS YP_003120729.1 256420076 8357144 1235194..1235835 1 NC_013132.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bha:BH2170 hypothetical protein; lysine exporter protein LysE/YggA 1235835 8357144 Cpin_1030 Chitinophaga pinensis DSM 2588 lysine exporter protein LysE/YggA YP_003120729.1 1235194 D 485918 CDS YP_003120730.1 256420077 8357145 complement(1235914..1236948) 1 NC_013132.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: eba:ebA3150 2-oxoglutarate ferredoxin oxidoreductase subunit beta; thiamine pyrophosphate domain-containing TPP-binding protein 1236948 8357145 Cpin_1031 Chitinophaga pinensis DSM 2588 thiamine pyrophosphate domain-containing TPP-binding protein YP_003120730.1 1235914 R 485918 CDS YP_003120731.1 256420078 8357146 complement(1237049..1237402) 1 NC_013132.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: hypothetical protein; alkylhydroperoxidase 1237402 8357146 Cpin_1032 Chitinophaga pinensis DSM 2588 alkylhydroperoxidase YP_003120731.1 1237049 R 485918 CDS YP_003120732.1 256420079 8357147 1237704..1239341 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: pha:PSHAa0111 hypothetical protein; hypothetical protein 1239341 8357147 Cpin_1033 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120732.1 1237704 D 485918 CDS YP_003120733.1 256420080 8357148 1239976..1242792 1 NC_013132.1 TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_0532 TonB-dependent receptor; TonB-dependent receptor 1242792 8357148 Cpin_1034 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003120733.1 1239976 D 485918 CDS YP_003120734.1 256420081 8357149 1242822..1243874 1 NC_013132.1 PFAM: phytase; KEGG: bsu:BSU19800 phytase; 3-phytase 1243874 8357149 Cpin_1035 Chitinophaga pinensis DSM 2588 3-phytase YP_003120734.1 1242822 D 485918 CDS YP_003120735.1 256420082 8357150 complement(1243945..1244277) 1 NC_013132.1 KEGG: bsu:BSU08580 hypothetical protein; hypothetical protein 1244277 8357150 Cpin_1036 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120735.1 1243945 R 485918 CDS YP_003120736.1 256420083 8357151 complement(1244297..1246033) 1 NC_013132.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 1246033 8357151 Cpin_1037 Chitinophaga pinensis DSM 2588 cell wall hydrolase/autolysin YP_003120736.1 1244297 R 485918 CDS YP_003120737.1 256420084 8357152 complement(1246118..1247911) 1 NC_013132.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bcz:BCZK4732 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1247911 8357152 Cpin_1038 Chitinophaga pinensis DSM 2588 acyl-CoA dehydrogenase domain-containing protein YP_003120737.1 1246118 R 485918 CDS YP_003120738.1 256420085 8357153 1247984..1248787 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bsu:BSU31420 hypothetical protein; alpha/beta hydrolase 1248787 8357153 Cpin_1039 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003120738.1 1247984 D 485918 CDS YP_003120739.1 256420086 8357154 1248851..1249993 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: zmo:ZMO0654 glycosyltransferase; family 2 glycosyl transferase 1249993 8357154 Cpin_1040 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003120739.1 1248851 D 485918 CDS YP_003120740.1 256420087 8357155 1249998..1251143 1 NC_013132.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lip:LI0250 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide/oligopeptide/nickel ABC transporter permease 1251143 8357155 Cpin_1041 Chitinophaga pinensis DSM 2588 dipeptide/oligopeptide/nickel ABC transporter permease YP_003120740.1 1249998 D 485918 CDS YP_003120741.1 256420088 8357156 1251200..1251622 1 NC_013132.1 hypothetical protein 1251622 8357156 Cpin_1042 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120741.1 1251200 D 485918 CDS YP_003120742.1 256420089 8357157 1251876..1252970 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: pfo:Pfl01_5687 glycosyl transferase, group 1; group 1 glycosyl transferase 1252970 8357157 Cpin_1043 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003120742.1 1251876 D 485918 CDS YP_003120743.1 256420090 8357158 1253019..1253369 1 NC_013132.1 hypothetical protein 1253369 8357158 Cpin_1044 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120743.1 1253019 D 485918 CDS YP_003120744.1 256420091 8357159 1253394..1253846 1 NC_013132.1 KEGG: sml:Smlt0443 hypothetical protein; hypothetical protein 1253846 8357159 Cpin_1045 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120744.1 1253394 D 485918 CDS YP_003120745.1 256420092 8357160 1253933..1254475 1 NC_013132.1 PFAM: colicin V production protein; KEGG: par:Psyc_1283 colicin V production protein; colicin V production protein 1254475 8357160 Cpin_1046 Chitinophaga pinensis DSM 2588 colicin V production protein YP_003120745.1 1253933 D 485918 CDS YP_003120746.1 256420093 8357161 1254547..1255314 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: plu:plu2202 hypothetical protein; alpha/beta hydrolase 1255314 8357161 Cpin_1047 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003120746.1 1254547 D 485918 CDS YP_003120747.1 256420094 8357162 1255637..1256296 1 NC_013132.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: bsu:BSU29700 acetoin dehydrogenase; hypothetical protein 1256296 8357162 Cpin_1048 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120747.1 1255637 D 485918 CDS YP_003120748.1 256420095 8357163 1256795..1257682 1 NC_013132.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1257682 ppnK 8357163 ppnK Chitinophaga pinensis DSM 2588 inorganic polyphosphate/ATP-NAD kinase YP_003120748.1 1256795 D 485918 CDS YP_003120749.1 256420096 8357164 1257812..1258678 1 NC_013132.1 hypothetical protein 1258678 8357164 Cpin_1050 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120749.1 1257812 D 485918 CDS YP_003120750.1 256420097 8357165 1258910..1259671 1 NC_013132.1 KEGG: gbm:Gbem_2752 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase 1259671 8357165 Cpin_1051 Chitinophaga pinensis DSM 2588 UDP diphosphate synthase YP_003120750.1 1258910 D 485918 CDS YP_003120751.1 256420098 8357166 1259652..1262396 1 NC_013132.1 PFAM: surface antigen variable number repeat protein; surface antigen (D15); KEGG: hch:HCH_05243 outer membrane protein/protective antigen OMA87; surface antigen variable number repeat-containing protein 1262396 8357166 Cpin_1052 Chitinophaga pinensis DSM 2588 surface antigen variable number repeat-containing protein YP_003120751.1 1259652 D 485918 CDS YP_003120752.1 256420099 8357167 1262580..1263116 1 NC_013132.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: har:HEAR1344 chaperone for outer membrane protein; outer membrane chaperone Skp 1263116 8357167 Cpin_1053 Chitinophaga pinensis DSM 2588 outer membrane chaperone Skp YP_003120752.1 1262580 D 485918 CDS YP_003120753.1 256420100 8357168 1263180..1263689 1 NC_013132.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: tbd:Tbd_0794 outer membrane protein; outer membrane chaperone Skp 1263689 8357168 Cpin_1054 Chitinophaga pinensis DSM 2588 outer membrane chaperone Skp YP_003120753.1 1263180 D 485918 CDS YP_003120754.1 256420101 8357169 1263867..1264022 1 NC_013132.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: sus:Acid_1093 50S ribosomal protein L34P; 50S ribosomal protein L34 1264022 8357169 Cpin_1055 Chitinophaga pinensis DSM 2588 50S ribosomal protein L34 YP_003120754.1 1263867 D 485918 CDS YP_003120755.1 256420102 8357170 complement(1264156..1264464) 1 NC_013132.1 hypothetical protein 1264464 8357170 Cpin_1056 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120755.1 1264156 R 485918 CDS YP_003120756.1 256420103 8357171 1264512..1264742 1 NC_013132.1 PFAM: protein of unknown function DUF37; KEGG: nmn:NMCC_0314 hypothetical protein; hypothetical protein 1264742 8357171 Cpin_1057 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120756.1 1264512 D 485918 CDS YP_003120757.1 256420104 8357172 1264861..1266528 1 NC_013132.1 KEGG: probable carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 1266528 8357172 Cpin_1058 Chitinophaga pinensis DSM 2588 carboxyl-terminal protease YP_003120757.1 1264861 D 485918 CDS YP_003120758.1 256420105 8357173 1266700..1268088 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_0576 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 1268088 8357173 Cpin_1059 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003120758.1 1266700 D 485918 CDS YP_003120759.1 256420106 8357174 1268102..1268884 1 NC_013132.1 PFAM: protein of unknown function DUF1080; KEGG: pzu:PHZ_c2159 hypothetical protein; hypothetical protein 1268884 8357174 Cpin_1060 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120759.1 1268102 D 485918 CDS YP_003120760.1 256420107 8357175 complement(1268939..1269544) 1 NC_013132.1 PFAM: manganese and iron superoxide dismutase; KEGG: tcx:Tcr_0237 superoxide dismutase; superoxide dismutase 1269544 8357175 Cpin_1061 Chitinophaga pinensis DSM 2588 superoxide dismutase YP_003120760.1 1268939 R 485918 CDS YP_003120761.1 256420108 8357176 1270093..1270797 1 NC_013132.1 KEGG: sus:Acid_1603 two component LuxR family transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 1270797 8357176 Cpin_1062 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003120761.1 1270093 D 485918 CDS YP_003120762.1 256420109 8357177 1270950..1271159 1 NC_013132.1 hypothetical protein 1271159 8357177 Cpin_1063 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120762.1 1270950 D 485918 CDS YP_003120763.1 256420110 8357178 1271307..1272233 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: ilo:IL0146 membrane protease family stomatin/prohibitin-like protein; hypothetical protein 1272233 8357178 Cpin_1064 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120763.1 1271307 D 485918 CDS YP_003120764.1 256420111 8357179 complement(1272296..1272736) 1 NC_013132.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pmr:PMI1882 tRNA-specific adenosine deaminase; zinc-binding CMP/dCMP deaminase 1272736 8357179 Cpin_1065 Chitinophaga pinensis DSM 2588 zinc-binding CMP/dCMP deaminase YP_003120764.1 1272296 R 485918 CDS YP_003120765.1 256420112 8357180 complement(1272751..1274880) 1 NC_013132.1 KEGG: bsu:BSU06620 NAD-dependent DNA ligase LigA; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4- type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase; BRCT domain protein; NAD-dependent DNA ligase 1274880 8357180 Cpin_1066 Chitinophaga pinensis DSM 2588 NAD-dependent DNA ligase YP_003120765.1 1272751 R 485918 CDS YP_003120766.1 256420113 8357181 1275365..1275502 1 NC_013132.1 hypothetical protein 1275502 8357181 Cpin_1067 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120766.1 1275365 D 485918 CDS YP_003120767.1 256420114 8357182 complement(1275782..1279108) 1 NC_013132.1 PFAM: methylmalonyl-CoA mutase; ArgK protein; cobalamin B12-binding domain protein; KEGG: mxa:MXAN_2261 B12 binding domain/ArgK/methylmalonyl-CoA mutase family protein; methylmalonyl-CoA mutase 1279108 8357182 Cpin_1068 Chitinophaga pinensis DSM 2588 methylmalonyl-CoA mutase YP_003120767.1 1275782 R 485918 CDS YP_003120768.1 256420115 8357183 1279286..1280719 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: aba:Acid345_3674 uncharacterised conserved protein UCP028846; hypothetical protein 1280719 8357183 Cpin_1069 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120768.1 1279286 D 485918 CDS YP_003120769.1 256420116 8357184 1280821..1282602 1 NC_013132.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: scl:sce1459 MutS-like mismatch repair protein, ATPases; DNA mismatch repair protein MutS domain-containing protein 1282602 8357184 Cpin_1070 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutS domain-containing protein YP_003120769.1 1280821 D 485918 CDS YP_003120770.1 256420117 8357185 1282653..1283735 1 NC_013132.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: csa:Csal_1500 radical SAM; radical SAM protein 1283735 8357185 Cpin_1071 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003120770.1 1282653 D 485918 CDS YP_003120771.1 256420118 8357186 1284363..1285091 1 NC_013132.1 KEGG: bce:BC2737 hypothetical protein; hypothetical protein 1285091 8357186 Cpin_1072 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120771.1 1284363 D 485918 CDS YP_003120772.1 256420119 8357187 1285823..1286968 1 NC_013132.1 SMART: AAA ATPase; KEGG: hypothetical protein; K08900 mitochondrial chaperone BCS1; ATPase AAA 1286968 8357187 Cpin_1073 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003120772.1 1285823 D 485918 CDS YP_003120773.1 256420120 8357188 1287151..1288350 1 NC_013132.1 PFAM: fatty acid hydroxylase; KEGG: ppw:PputW619_5042 fatty acid hydroxylase; fatty acid hydroxylase 1288350 8357188 Cpin_1074 Chitinophaga pinensis DSM 2588 fatty acid hydroxylase YP_003120773.1 1287151 D 485918 CDS YP_003120774.1 256420121 8357189 complement(1288347..1288835) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sit:TM1040_2723 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 1288835 8357189 Cpin_1075 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120774.1 1288347 R 485918 CDS YP_003120775.1 256420122 8357190 1289122..1290234 1 NC_013132.1 KEGG: apj:APJL_1492 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; UDP-galactopyranose mutase 1290234 8357190 Cpin_1076 Chitinophaga pinensis DSM 2588 UDP-galactopyranose mutase YP_003120775.1 1289122 D 485918 CDS YP_003120776.1 256420123 8357191 1290259..1291245 1 NC_013132.1 KEGG: bmj:BMULJ_02294 hypothetical protein; hypothetical protein 1291245 8357191 Cpin_1077 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120776.1 1290259 D 485918 CDS YP_003120777.1 256420124 8357192 1291623..1294115 1 NC_013132.1 PFAM: polysaccharide export protein; KEGG: saz:Sama_2264 ClpX, ATPase regulatory subunit; polysaccharide export protein 1294115 8357192 Cpin_1078 Chitinophaga pinensis DSM 2588 polysaccharide export protein YP_003120777.1 1291623 D 485918 CDS YP_003120778.1 256420125 8357193 1294162..1295247 1 NC_013132.1 PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1295247 8357193 Cpin_1079 Chitinophaga pinensis DSM 2588 lipopolysaccharide biosynthesis protein YP_003120778.1 1294162 D 485918 CDS YP_003120779.1 256420126 8357194 1295282..1296343 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: wsu:WS0025 UDP-glucuronic acid epimerase; NAD-dependent epimerase/dehydratase 1296343 8357194 Cpin_1080 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003120779.1 1295282 D 485918 CDS YP_003120780.1 256420127 8357195 1296346..1297611 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein; KEGG: cps:CPS_0582 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1297611 8357195 Cpin_1081 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein YP_003120780.1 1296346 D 485918 CDS YP_003120781.1 256420128 8357196 1297608..1298633 1 NC_013132.1 KEGG: neu:NE2270 hypothetical protein; hypothetical protein 1298633 8357196 Cpin_1082 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120781.1 1297608 D 485918 CDS YP_003120782.1 256420129 8357197 1298639..1299793 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: gbm:Gbem_3442 glycosyl transferase group 1; group 1 glycosyl transferase 1299793 8357197 Cpin_1083 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003120782.1 1298639 D 485918 CDS YP_003120783.1 256420130 8357198 1299819..1300970 1 NC_013132.1 KEGG: bsu:BSU34310 hypothetical protein; hypothetical protein 1300970 8357198 Cpin_1084 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120783.1 1299819 D 485918 CDS YP_003120784.1 256420131 8357199 1300984..1301973 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: abu:Abu_1811 glycosyltransferase; family 2 glycosyl transferase 1301973 8357199 Cpin_1085 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003120784.1 1300984 D 485918 CDS YP_003120785.1 256420132 8357200 1301996..1303126 1 NC_013132.1 KEGG: spe:Spro_0163 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1303126 8357200 Cpin_1086 Chitinophaga pinensis DSM 2588 UDP-N-acetylglucosamine 2-epimerase YP_003120785.1 1301996 D 485918 CDS YP_003120786.1 256420133 8357201 1303128..1304207 1 NC_013132.1 KEGG: exoL; succinoglycan biosynthesis protein; hypothetical protein 1304207 8357201 Cpin_1087 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120786.1 1303128 D 485918 CDS YP_003120787.1 256420134 8357202 1304224..1305906 1 NC_013132.1 KEGG: spe:Spro_2570 hypothetical protein; hypothetical protein 1305906 8357202 Cpin_1088 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120787.1 1304224 D 485918 CDS YP_003120788.1 256420135 8357203 1305930..1307108 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: ecp:ECP_2075 glycosyltransferase; group 1 glycosyl transferase 1307108 8357203 Cpin_1089 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003120788.1 1305930 D 485918 CDS YP_003120789.1 256420136 8357204 1307210..1308322 1 NC_013132.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 1308322 8357204 Cpin_1090 Chitinophaga pinensis DSM 2588 GDP-mannose 4,6-dehydratase YP_003120789.1 1307210 D 485918 CDS YP_003120790.1 256420137 8357205 1308330..1309259 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; KEGG: gsu:GSU0627 GDP-fucose synthetase; NAD-dependent epimerase/dehydratase 1309259 8357205 Cpin_1091 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003120790.1 1308330 D 485918 CDS YP_003120791.1 256420138 8357206 1309381..1310952 1 NC_013132.1 hypothetical protein 1310952 8357206 Cpin_1092 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120791.1 1309381 D 485918 CDS YP_003120792.1 256420139 8357207 1311047..1312951 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcr:BCAH187_A2308 ABC transporter, ATP- binding protein; ABC transporter 1312951 8357207 Cpin_1093 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120792.1 1311047 D 485918 CDS YP_003120793.1 256420140 8357208 complement(1313010..1313381) 1 NC_013132.1 hypothetical protein 1313381 8357208 Cpin_1094 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120793.1 1313010 R 485918 CDS YP_003120794.1 256420141 8357209 1313448..1314056 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_1342 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 1314056 8357209 Cpin_1095 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120794.1 1313448 D 485918 CDS YP_003120795.1 256420142 8357210 1314156..1315157 1 NC_013132.1 PFAM: FecR protein; KEGG: FecR protein; anti-FecI sigma factor FecR 1315157 8357210 Cpin_1096 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003120795.1 1314156 D 485918 CDS YP_003120796.1 256420143 8357211 1315207..1318653 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 1318653 8357211 Cpin_1097 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120796.1 1315207 D 485918 CDS YP_003120797.1 256420144 8357212 1318665..1320131 1 NC_013132.1 hypothetical protein 1320131 8357212 Cpin_1098 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120797.1 1318665 D 485918 CDS YP_003120798.1 256420145 8357213 1320147..1320977 1 NC_013132.1 hypothetical protein 1320977 8357213 Cpin_1099 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120798.1 1320147 D 485918 CDS YP_003120799.1 256420146 8357214 1320993..1322405 1 NC_013132.1 hypothetical protein 1322405 8357214 Cpin_1100 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120799.1 1320993 D 485918 CDS YP_003120800.1 256420147 8357215 complement(1322508..1322975) 1 NC_013132.1 hypothetical protein 1322975 8357215 Cpin_1101 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120800.1 1322508 R 485918 CDS YP_003120801.1 256420148 8357216 complement(1323037..1323435) 1 NC_013132.1 KEGG: xca:xccb100_4121 hypothetical protein; hypothetical protein 1323435 8357216 Cpin_1102 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120801.1 1323037 R 485918 CDS YP_003120802.1 256420149 8357217 1323540..1324535 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_00532 AraC-type DNA-binding domain- containing protein; AraC family transcriptional regulator 1324535 8357217 Cpin_1103 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120802.1 1323540 D 485918 CDS YP_003120803.1 256420150 8357218 1324572..1324979 1 NC_013132.1 KEGG: gur:Gura_1130 MarR family transcriptional regulator; hypothetical protein 1324979 8357218 Cpin_1104 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120803.1 1324572 D 485918 CDS YP_003120804.1 256420151 8357219 1325083..1325364 1 NC_013132.1 hypothetical protein 1325364 8357219 Cpin_1105 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120804.1 1325083 D 485918 CDS YP_003120805.1 256420152 8357220 1325437..1326225 1 NC_013132.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: hch:HCH_01287 epimerase, PhzC/PhzF-like protein; phenazine biosynthesis protein PhzF family protein 1326225 8357220 Cpin_1106 Chitinophaga pinensis DSM 2588 phenazine biosynthesis protein PhzF family protein YP_003120805.1 1325437 D 485918 CDS YP_003120806.1 256420153 8357221 1326336..1326827 1 NC_013132.1 PFAM: protein of unknown function DUF1486; KEGG: ott:OTT_0545 hypothetical protein; hypothetical protein 1326827 8357221 Cpin_1107 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120806.1 1326336 D 485918 CDS YP_003120807.1 256420154 8357222 complement(1326840..1327463) 1 NC_013132.1 hypothetical protein 1327463 8357222 Cpin_1108 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120807.1 1326840 R 485918 CDS YP_003120808.1 256420155 8357223 1327541..1328332 1 NC_013132.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hch:HCH_00176 amidohydrolase; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 1328332 8357223 Cpin_1109 Chitinophaga pinensis DSM 2588 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003120808.1 1327541 D 485918 CDS YP_003120809.1 256420156 8357224 complement(1328541..1329032) 1 NC_013132.1 hypothetical protein 1329032 8357224 Cpin_1110 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120809.1 1328541 R 485918 CDS YP_003120810.1 256420157 8357225 1329151..1329921 1 NC_013132.1 hypothetical protein 1329921 8357225 Cpin_1111 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120810.1 1329151 D 485918 CDS YP_003120811.1 256420158 8357226 complement(1330279..1331085) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 1331085 8357226 Cpin_1112 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120811.1 1330279 R 485918 CDS YP_003120812.1 256420159 8357227 complement(1331147..1331953) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpy:Bphyt_6332 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1331953 8357227 Cpin_1113 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003120812.1 1331147 R 485918 CDS YP_003120813.1 256420160 8357229 complement(1332253..1334043) 1 NC_013132.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cvi:CV_4051 long chain fatty-acid CoA ligase; AMP-dependent synthetase and ligase 1334043 8357229 Cpin_1114 Chitinophaga pinensis DSM 2588 AMP-dependent synthetase and ligase YP_003120813.1 1332253 R 485918 CDS YP_003120814.1 256420161 8357230 complement(1334091..1334381) 1 NC_013132.1 KEGG: scl:sce2799 hypothetical protein; hypothetical protein 1334381 8357230 Cpin_1115 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120814.1 1334091 R 485918 CDS YP_003120815.1 256420162 8357231 complement(1334769..1336001) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2794 major facilitator superfamily MFS_1; major facilitator superfamily protein 1336001 8357231 Cpin_1116 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003120815.1 1334769 R 485918 CDS YP_003120816.1 256420163 8357232 complement(1336011..1336679) 1 NC_013132.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: dps:DP2324 transcription regulator; GntR family transcriptional regulator 1336679 8357232 Cpin_1117 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003120816.1 1336011 R 485918 CDS YP_003120817.1 256420164 8357233 1336845..1337495 1 NC_013132.1 KEGG: TPR Domain containing protein; hypothetical protein 1337495 8357233 Cpin_1118 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120817.1 1336845 D 485918 CDS YP_003120818.1 256420165 8357234 1337639..1338205 1 NC_013132.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sde:Sde_3071 MCP methyltransferase, CheR-type; multiple antibiotic resistance (MarC)-like protein 1338205 8357234 Cpin_1119 Chitinophaga pinensis DSM 2588 multiple antibiotic resistance (MarC)-like protein YP_003120818.1 1337639 D 485918 CDS YP_003120819.1 256420166 8357236 complement(1338480..1339391) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: gsu:GSU0631 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 1339391 8357236 Cpin_1120 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003120819.1 1338480 R 485918 CDS YP_003120820.1 256420167 8357237 complement(1339560..1340099) 1 NC_013132.1 KEGG: sfr:Sfri_3542 hypothetical protein; hypothetical protein 1340099 8357237 Cpin_1121 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120820.1 1339560 R 485918 CDS YP_003120821.1 256420168 8357238 complement(1340188..1340595) 1 NC_013132.1 hypothetical protein 1340595 8357238 Cpin_1122 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120821.1 1340188 R 485918 CDS YP_003120822.1 256420169 8357239 1340692..1342158 1 NC_013132.1 KEGG: sus:Acid_1050 hypothetical protein; hypothetical protein 1342158 8357239 Cpin_1123 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120822.1 1340692 D 485918 CDS YP_003120823.1 256420170 8357240 1342173..1342769 1 NC_013132.1 KEGG: psa:PST_1419 hypothetical protein; hypothetical protein 1342769 8357240 Cpin_1124 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120823.1 1342173 D 485918 CDS YP_003120824.1 256420171 8357241 1342798..1346199 1 NC_013132.1 KEGG: tmz:Tmz1t_0051 conserved hypothetical cytosolic protein; hypothetical protein 1346199 8357241 Cpin_1125 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120824.1 1342798 D 485918 CDS YP_003120825.1 256420172 8357242 complement(1346279..1347439) 1 NC_013132.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1347439 8357242 Cpin_1126 Chitinophaga pinensis DSM 2588 iron-containing alcohol dehydrogenase YP_003120825.1 1346279 R 485918 CDS YP_003120826.1 256420173 8357243 1347798..1348160 1 NC_013132.1 KEGG: pmr:PMI1930 hypothetical protein; hypothetical protein 1348160 8357243 Cpin_1127 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120826.1 1347798 D 485918 CDS YP_003120827.1 256420174 8357244 complement(1348161..1348925) 1 NC_013132.1 hypothetical protein 1348925 8357244 Cpin_1128 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120827.1 1348161 R 485918 CDS YP_003120828.1 256420175 8357245 complement(1348970..1349353) 1 NC_013132.1 hypothetical protein 1349353 8357245 Cpin_1129 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120828.1 1348970 R 485918 CDS YP_003120829.1 256420176 8357246 complement(1349381..1350106) 1 NC_013132.1 hypothetical protein 1350106 8357246 Cpin_1130 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120829.1 1349381 R 485918 CDS YP_003120830.1 256420177 8357247 complement(1350129..1350839) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1350839 8357247 Cpin_1131 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120830.1 1350129 R 485918 CDS YP_003120831.1 256420178 8357248 complement(1350915..1352045) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: sus:Acid_1077 alpha/beta hydrolase domain- containing protein; alpha/beta hydrolase 1352045 8357248 Cpin_1132 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003120831.1 1350915 R 485918 CDS YP_003120832.1 256420179 8357249 1352191..1352577 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: afr:AFE_0198 transcriptional regulator; HxlR family transcriptional regulator 1352577 8357249 Cpin_1133 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003120832.1 1352191 D 485918 CDS YP_003120833.1 256420180 8357250 1352651..1354462 1 NC_013132.1 PFAM: beta-lactamase; KEGG: bca:BCE_2264 hypothetical protein; beta-lactamase 1354462 8357250 Cpin_1134 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003120833.1 1352651 D 485918 CDS YP_003120834.1 256420181 8357251 complement(1354552..1355214) 1 NC_013132.1 PFAM: YceI family protein; KEGG: bba:Bd2001 YCE I like family protein; hypothetical protein 1355214 8357251 Cpin_1135 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120834.1 1354552 R 485918 CDS YP_003120835.1 256420182 8357252 complement(1355230..1356888) 1 NC_013132.1 TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_B3740 phenylacetic acid degradation protein paaN2; phenylacetic acid degradation protein paaN 1356888 8357252 Cpin_1136 Chitinophaga pinensis DSM 2588 phenylacetic acid degradation protein paaN YP_003120835.1 1355230 R 485918 CDS YP_003120836.1 256420183 8357253 complement(1356931..1358058) 1 NC_013132.1 SMART: hypothetical protein; KEGG: TPR Domain containing protein; hypothetical protein 1358058 8357253 Cpin_1137 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120836.1 1356931 R 485918 CDS YP_003120837.1 256420184 8357254 complement(1358171..1359412) 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: bcy:Bcer98_2084 hypothetical protein; hypothetical protein 1359412 8357254 Cpin_1138 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120837.1 1358171 R 485918 CDS YP_003120838.1 256420185 8357255 complement(1359708..1360778) 1 NC_013132.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1360778 8357255 Cpin_1139 Chitinophaga pinensis DSM 2588 phosphoserine aminotransferase YP_003120838.1 1359708 R 485918 CDS YP_003120839.1 256420186 8357256 complement(1360961..1361902) 1 NC_013132.1 KEGG: rec:RHECIAT_CH0002212 hypothetical protein; hypothetical protein 1361902 8357256 Cpin_1140 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120839.1 1360961 R 485918 CDS YP_003120840.1 256420187 8357257 complement(1362113..1362757) 1 NC_013132.1 PFAM: protein of unknown function DUF502; KEGG: sat:SYN_00388 hypothetical protein; hypothetical protein 1362757 8357257 Cpin_1141 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120840.1 1362113 R 485918 CDS YP_003120841.1 256420188 8357258 1363274..1363882 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: bca:BCE_3313 TetR family transcriptional regulator; TetR family transcriptional regulator 1363882 8357258 Cpin_1142 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003120841.1 1363274 D 485918 CDS YP_003120842.1 256420189 8357259 1363897..1365264 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: sus:Acid_5987 outer membrane efflux protein; outer membrane efflux protein 1365264 8357259 Cpin_1143 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003120842.1 1363897 D 485918 CDS YP_003120843.1 256420190 8357260 1365300..1366406 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_1649 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 1366406 8357260 Cpin_1144 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003120843.1 1365300 D 485918 CDS YP_003120844.1 256420191 8357261 1366424..1369999 1 NC_013132.1 PFAM: acriflavin resistance protein; KEGG: dol:Dole_1215 acriflavin resistance protein; acriflavin resistance protein 1369999 8357261 Cpin_1145 Chitinophaga pinensis DSM 2588 acriflavin resistance protein YP_003120844.1 1366424 D 485918 CDS YP_003120845.1 256420192 8357262 1370170..1370955 1 NC_013132.1 PFAM: protein of unknown function DUF124; KEGG: bcb:BCB4264_A4991 hypothetical protein; hypothetical protein 1370955 8357262 Cpin_1146 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120845.1 1370170 D 485918 CDS YP_003120846.1 256420193 8357263 1371074..1372339 1 NC_013132.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: swd:Swoo_1405 kynureninase; kynureninase 1372339 8357263 Cpin_1147 Chitinophaga pinensis DSM 2588 kynureninase YP_003120846.1 1371074 D 485918 CDS YP_003120847.1 256420194 8357264 1373066..1373647 1 NC_013132.1 PFAM: phosphoesterase HXTX; KEGG: bcy:Bcer98_0945 hypothetical protein; phosphoesterase HXTX 1373647 8357264 Cpin_1148 Chitinophaga pinensis DSM 2588 phosphoesterase HXTX YP_003120847.1 1373066 D 485918 CDS YP_003120848.1 256420195 8357265 complement(1373708..1374700) 1 NC_013132.1 PFAM: FecR protein; KEGG: psp:PSPPH_2117 FecR protein superfamily protein; anti-FecI sigma factor FecR 1374700 8357265 Cpin_1149 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003120848.1 1373708 R 485918 CDS YP_003120849.1 256420196 8357266 complement(1374704..1375375) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pla:Plav_0951 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 1375375 8357266 Cpin_1150 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120849.1 1374704 R 485918 CDS YP_003120850.1 256420197 8357267 complement(1375394..1376149) 1 NC_013132.1 KEGG: ank:AnaeK_1497 hypothetical protein; hypothetical protein 1376149 8357267 Cpin_1151 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120850.1 1375394 R 485918 CDS YP_003120851.1 256420198 8357268 complement(1376297..1376614) 1 NC_013132.1 hypothetical protein 1376614 8357268 Cpin_1152 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120851.1 1376297 R 485918 CDS YP_003120852.1 256420199 8357269 complement(1376933..1377676) 1 NC_013132.1 PFAM: protein of unknown function DUF1112; KEGG: sml:Smlt0986 transmembrane protein; hypothetical protein 1377676 8357269 Cpin_1153 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120852.1 1376933 R 485918 CDS YP_003120853.1 256420200 8357270 1378130..1379980 1 NC_013132.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: eba:ebA3149 2-oxoglutarate ferredoxin oxidoreductase alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1379980 8357270 Cpin_1154 Chitinophaga pinensis DSM 2588 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_003120853.1 1378130 D 485918 CDS YP_003120854.1 256420201 8357271 1380130..1380723 1 NC_013132.1 hypothetical protein 1380723 8357271 Cpin_1155 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120854.1 1380130 D 485918 CDS YP_003120855.1 256420202 8357272 complement(1380794..1381984) 1 NC_013132.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mes:Meso_0261 oxidoreductase-like; oxidoreductase domain-containing protein 1381984 8357272 Cpin_1156 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003120855.1 1380794 R 485918 CDS YP_003120856.1 256420203 8357273 complement(1382100..1383308) 1 NC_013132.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: smt:Smal_1048 nucleoside:H symporter; nucleoside:H symporter 1383308 8357273 Cpin_1157 Chitinophaga pinensis DSM 2588 nucleoside:H symporter YP_003120856.1 1382100 R 485918 CDS YP_003120857.1 256420204 8357274 complement(1383408..1384124) 1 NC_013132.1 KEGG: mxa:MXAN_2622 hypothetical protein; hypothetical protein 1384124 8357274 Cpin_1158 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120857.1 1383408 R 485918 CDS YP_003120858.1 256420205 8357275 complement(1384134..1384781) 1 NC_013132.1 KEGG: hhe:HH1575 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 1384781 8357275 Cpin_1159 Chitinophaga pinensis DSM 2588 endonuclease III YP_003120858.1 1384134 R 485918 CDS YP_003120859.1 256420206 8357276 complement(1384901..1385122) 1 NC_013132.1 hypothetical protein 1385122 8357276 Cpin_1160 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120859.1 1384901 R 485918 CDS YP_003120860.1 256420207 8357277 complement(1385281..1385586) 1 NC_013132.1 hypothetical protein 1385586 8357277 Cpin_1161 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120860.1 1385281 R 485918 CDS YP_003120861.1 256420208 8357278 complement(1385735..1387027) 1 NC_013132.1 KEGG: phosphopyruvate hydratase; K01689 enolase; TIGRFAM: enolase; PFAM: enolase; enolase 1387027 8357278 Cpin_1162 Chitinophaga pinensis DSM 2588 enolase YP_003120861.1 1385735 R 485918 CDS YP_003120862.1 256420209 8357279 complement(1387103..1388014) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4515 ABC transporter related; ABC transporter 1388014 8357279 Cpin_1163 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120862.1 1387103 R 485918 CDS YP_003120863.1 256420210 8357280 1388332..1388907 1 NC_013132.1 PFAM: stress protein; KEGG: bur:Bcep18194_B0270 stress protein; stress protein 1388907 8357280 Cpin_1164 Chitinophaga pinensis DSM 2588 stress protein YP_003120863.1 1388332 D 485918 CDS YP_003120864.1 256420211 8357281 1388944..1389612 1 NC_013132.1 PFAM: stress protein; KEGG: eba:p1B321 tellurium resistance protein; stress protein 1389612 8357281 Cpin_1165 Chitinophaga pinensis DSM 2588 stress protein YP_003120864.1 1388944 D 485918 CDS YP_003120865.1 256420212 8357282 1389638..1390276 1 NC_013132.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: aci:ACIAD1969 tellurium resistance protein; von Willebrand factor type A 1390276 8357282 Cpin_1166 Chitinophaga pinensis DSM 2588 von Willebrand factor type A YP_003120865.1 1389638 D 485918 CDS YP_003120866.1 256420213 8357283 1390278..1390988 1 NC_013132.1 PFAM: haloacid dehalogenase; KEGG: rle:pRL100112 dehalogenase-hydrolase; haloacid dehalogenase 1390988 8357283 Cpin_1167 Chitinophaga pinensis DSM 2588 haloacid dehalogenase YP_003120866.1 1390278 D 485918 CDS YP_003120867.1 256420214 8357284 1390963..1391853 1 NC_013132.1 KEGG: rle:pRL100111 hypothetical protein; hypothetical protein 1391853 8357284 Cpin_1168 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120867.1 1390963 D 485918 CDS YP_003120868.1 256420215 8357285 1391787..1392341 1 NC_013132.1 PFAM: stress protein; KEGG: hso:HS_0633 stress response protein; stress protein 1392341 8357285 Cpin_1169 Chitinophaga pinensis DSM 2588 stress protein YP_003120868.1 1391787 D 485918 CDS YP_003120869.1 256420216 8357286 1392552..1393187 1 NC_013132.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: pna:Pnap_4667 von Willebrand factor, type A; von Willebrand factor type A 1393187 8357286 Cpin_1170 Chitinophaga pinensis DSM 2588 von Willebrand factor type A YP_003120869.1 1392552 D 485918 CDS YP_003120870.1 256420217 8357287 1393268..1393519 1 NC_013132.1 hypothetical protein 1393519 8357287 Cpin_1171 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120870.1 1393268 D 485918 CDS YP_003120871.1 256420218 8357288 1393516..1394574 1 NC_013132.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: eba:p1B324 tellurium resistance protein; von Willebrand factor type A 1394574 8357288 Cpin_1172 Chitinophaga pinensis DSM 2588 von Willebrand factor type A YP_003120871.1 1393516 D 485918 CDS YP_003120872.1 256420219 8357289 1394574..1395986 1 NC_013132.1 KEGG: eba:p1B325 hypothetical protein; hypothetical protein 1395986 8357289 Cpin_1173 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120872.1 1394574 D 485918 CDS YP_003120873.1 256420220 8357290 1395998..1397515 1 NC_013132.1 KEGG: kpe:KPK_A0216 hypothetical protein; hypothetical protein 1397515 8357290 Cpin_1174 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120873.1 1395998 D 485918 CDS YP_003120874.1 256420221 8357291 1397551..1398366 1 NC_013132.1 PFAM: integral membrane protein TerC; KEGG: bsu:BSU02920 hypothetical protein; integral membrane protein TerC 1398366 8357291 Cpin_1175 Chitinophaga pinensis DSM 2588 integral membrane protein TerC YP_003120874.1 1397551 D 485918 CDS YP_003120875.1 256420222 8357292 complement(1398457..1399191) 1 NC_013132.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: cja:CJA_2848 protocatechuate dioxygenase; intradiol ring-cleavage dioxygenase 1399191 8357292 Cpin_1176 Chitinophaga pinensis DSM 2588 intradiol ring-cleavage dioxygenase YP_003120875.1 1398457 R 485918 CDS YP_003120876.1 256420223 8357293 complement(1399303..1399998) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 1399998 8357293 Cpin_1177 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003120876.1 1399303 R 485918 CDS YP_003120877.1 256420224 8357294 complement(1399995..1401236) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sde:Sde_3001 DEAD/DEAH box helicase-like; signal transduction histidine kinase LytS 1401236 8357294 Cpin_1178 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003120877.1 1399995 R 485918 CDS YP_003120878.1 256420225 8357295 1401260..1402957 1 NC_013132.1 PFAM: peptidase M23; KEGG: hpp:HPP12_1541 membrane-bound metallopeptidase; peptidase M23 1402957 8357295 Cpin_1179 Chitinophaga pinensis DSM 2588 peptidase M23 YP_003120878.1 1401260 D 485918 CDS YP_003120879.1 256420226 8357296 1402975..1403436 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mmw:Mmwyl1_2142 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; peroxiredoxin 1403436 8357296 Cpin_1180 Chitinophaga pinensis DSM 2588 peroxiredoxin YP_003120879.1 1402975 D 485918 CDS YP_003120880.1 256420227 8357297 complement(1403517..1405049) 1 NC_013132.1 PFAM: protein of unknown function DUF323; KEGG: bha:BH0900 transcriptional regulator (enhancement of xylanase A production); hypothetical protein 1405049 8357297 Cpin_1181 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120880.1 1403517 R 485918 CDS YP_003120881.1 256420228 8357298 1405617..1408994 1 NC_013132.1 KEGG: sfu:Sfum_4007 hypothetical protein; hypothetical protein 1408994 8357298 Cpin_1182 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120881.1 1405617 D 485918 CDS YP_003120882.1 256420229 8357299 1409104..1410288 1 NC_013132.1 hypothetical protein 1410288 8357299 Cpin_1183 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120882.1 1409104 D 485918 CDS YP_003120883.1 256420230 8357300 1410415..1410897 1 NC_013132.1 KEGG: sfu:Sfum_1636 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1410897 8357300 Cpin_1184 Chitinophaga pinensis DSM 2588 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_003120883.1 1410415 D 485918 CDS YP_003120884.1 256420231 8357301 1410968..1411411 1 NC_013132.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: hypothetical protein; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 1411411 8357301 Cpin_1185 Chitinophaga pinensis DSM 2588 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_003120884.1 1410968 D 485918 CDS YP_003120885.1 256420232 8357302 1411415..1413253 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 1413253 8357302 Cpin_1186 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120885.1 1411415 D 485918 CDS YP_003120886.1 256420233 8357303 1413299..1414129 1 NC_013132.1 hypothetical protein 1414129 8357303 Cpin_1187 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120886.1 1413299 D 485918 CDS YP_003120887.1 256420234 8357304 1414193..1415665 1 NC_013132.1 PFAM: peptidase M23; KEGG: hypothetical protein; peptidase M23 1415665 8357304 Cpin_1188 Chitinophaga pinensis DSM 2588 peptidase M23 YP_003120887.1 1414193 D 485918 CDS YP_003120888.1 256420235 8357305 complement(1415940..1417091) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: hypothetical protein; group 1 glycosyl transferase 1417091 8357305 Cpin_1189 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003120888.1 1415940 R 485918 CDS YP_003120889.1 256420236 8357306 1417344..1418720 1 NC_013132.1 PFAM: peptidase M28; peptidase M20; KEGG: mxa:MXAN_0100 peptidase, M28D (aminopeptidase ES-62) subfamily; peptidase M28 1418720 8357306 Cpin_1190 Chitinophaga pinensis DSM 2588 peptidase M28 YP_003120889.1 1417344 D 485918 CDS YP_003120890.1 256420237 8357307 1418745..1419122 1 NC_013132.1 KEGG: gme:Gmet_2579 hypothetical protein; hypothetical protein 1419122 8357307 Cpin_1191 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120890.1 1418745 D 485918 CDS YP_003120891.1 256420238 8357308 complement(1419348..1420055) 1 NC_013132.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_1515 uroporphyrin-III C/tetrapyrrole methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 1420055 8357308 Cpin_1192 Chitinophaga pinensis DSM 2588 uroporphyrin-III C/tetrapyrrole methyltransferase YP_003120891.1 1419348 R 485918 CDS YP_003120892.1 256420239 8357309 complement(1420039..1420818) 1 NC_013132.1 PFAM: protein of unknown function DUF540; KEGG: pae:PA0846 sulfate transport protein CysZ; hypothetical protein 1420818 8357309 Cpin_1193 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120892.1 1420039 R 485918 CDS YP_003120893.1 256420240 8357310 complement(1420976..1421992) 1 NC_013132.1 hypothetical protein 1421992 8357310 Cpin_1194 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120893.1 1420976 R 485918 CDS YP_003120894.1 256420241 8357311 complement(1422196..1422849) 1 NC_013132.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1422849 upp 8357311 upp Chitinophaga pinensis DSM 2588 uracil phosphoribosyltransferase YP_003120894.1 1422196 R 485918 CDS YP_003120895.1 256420242 8357312 complement(1422979..1424898) 1 NC_013132.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dal:Dalk_0318 von Willebrand factor type A; von Willebrand factor type A 1424898 8357312 Cpin_1196 Chitinophaga pinensis DSM 2588 von Willebrand factor type A YP_003120895.1 1422979 R 485918 CDS YP_003120896.1 256420243 8357313 1425012..1426091 1 NC_013132.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1426091 anmK 8357313 anmK Chitinophaga pinensis DSM 2588 anhydro-N-acetylmuramic acid kinase YP_003120896.1 1425012 D 485918 CDS YP_003120897.1 256420244 8357314 complement(1426144..1427781) 1 NC_013132.1 KEGG: sun:SUN_0856 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; adenine deaminase 1427781 8357314 Cpin_1198 Chitinophaga pinensis DSM 2588 adenine deaminase YP_003120897.1 1426144 R 485918 CDS YP_003120898.1 256420245 8357315 complement(1427793..1428800) 1 NC_013132.1 KEGG: gbm:Gbem_2780 helix-turn-helix type 11 domain protein; transcriptional regulator 1428800 8357315 Cpin_1199 Chitinophaga pinensis DSM 2588 transcriptional regulator YP_003120898.1 1427793 R 485918 CDS YP_003120899.1 256420246 8357316 1428902..1429486 1 NC_013132.1 hypothetical protein 1429486 8357316 Cpin_1200 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120899.1 1428902 D 485918 CDS YP_003120900.1 256420247 8357317 1429753..1430388 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: rpi:Rpic_0704 peroxidase; peroxidase 1430388 8357317 Cpin_1201 Chitinophaga pinensis DSM 2588 peroxidase YP_003120900.1 1429753 D 485918 CDS YP_003120901.1 256420248 8357318 complement(1430767..1431510) 1 NC_013132.1 PFAM: pseudouridine synthase; KEGG: sus:Acid_7265 ribosomal large subunit pseudouridine synthase D; pseudouridine synthase 1431510 8357318 Cpin_1202 Chitinophaga pinensis DSM 2588 pseudouridine synthase YP_003120901.1 1430767 R 485918 CDS YP_003120902.1 256420249 8357319 complement(1431514..1433064) 1 NC_013132.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: hypothetical protein; pseudouridine synthase 1433064 8357319 Cpin_1203 Chitinophaga pinensis DSM 2588 pseudouridine synthase YP_003120902.1 1431514 R 485918 CDS YP_003120903.1 256420250 8357320 complement(1433100..1434143) 1 NC_013132.1 KEGG: mxa:MXAN_3544 radical SAM enzyme, Cfr family; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1434143 8357320 Cpin_1204 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003120903.1 1433100 R 485918 CDS YP_003120904.1 256420251 8357321 1434486..1435688 1 NC_013132.1 KEGG: gme:Gmet_2058 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 1435688 8357321 Cpin_1205 Chitinophaga pinensis DSM 2588 acetyl-CoA acetyltransferase YP_003120904.1 1434486 D 485918 CDS YP_003120905.1 256420252 8357322 complement(1435750..1436322) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mxa:MXAN_4662 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 1436322 8357322 Cpin_1206 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003120905.1 1435750 R 485918 CDS YP_003120906.1 256420253 8357323 1436603..1439461 1 NC_013132.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: aba:Acid345_2022 excinuclease ABC subunit A; excinuclease ABC subunit A 1439461 8357323 Cpin_1207 Chitinophaga pinensis DSM 2588 excinuclease ABC subunit A YP_003120906.1 1436603 D 485918 CDS YP_003120907.1 256420254 8357324 complement(1439645..1440085) 1 NC_013132.1 hypothetical protein 1440085 8357324 Cpin_1208 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120907.1 1439645 R 485918 CDS YP_003120908.1 256420255 8357325 1440206..1442491 1 NC_013132.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: glo:Glov_1262 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase; oxaloacetate-decarboxylating malate dehydrogenase (NADP(+)) phosphate acetyltransferase 1442491 8357325 Cpin_1209 Chitinophaga pinensis DSM 2588 oxaloacetate-decarboxylating malate dehydrogenase (NADP(+)) phosphate acetyltransferase YP_003120908.1 1440206 D 485918 CDS YP_003120909.1 256420256 8357326 1442662..1443693 1 NC_013132.1 hypothetical protein 1443693 8357326 Cpin_1210 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120909.1 1442662 D 485918 CDS YP_003120910.1 256420257 8357327 1443751..1444494 1 NC_013132.1 PFAM: protein of unknown function DUF140; KEGG: gdj:Gdia_1852 protein of unknown function DUF140; hypothetical protein 1444494 8357327 Cpin_1211 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120910.1 1443751 D 485918 CDS YP_003120911.1 256420258 8357328 1444573..1445376 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_1040 ABC transporter related; ABC transporter 1445376 8357328 Cpin_1212 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120911.1 1444573 D 485918 CDS YP_003120912.1 256420259 8357329 1445442..1446323 1 NC_013132.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: nis:NIS_0839 succinyl-CoA synthase, alpha subunit; succinyl-CoA synthetase subunit alpha 1446323 8357329 Cpin_1213 Chitinophaga pinensis DSM 2588 succinyl-CoA synthetase subunit alpha YP_003120912.1 1445442 D 485918 CDS YP_003120913.1 256420260 8357330 1446490..1452666 1 NC_013132.1 PFAM: alpha-2-macroglobulin; alpha-2- macroglobulin; KEGG: mxa:MXAN_2974 hypothetical protein; alpha-2-macroglobulin 1452666 8357330 Cpin_1214 Chitinophaga pinensis DSM 2588 alpha-2-macroglobulin YP_003120913.1 1446490 D 485918 CDS YP_003120914.1 256420261 8357331 1452848..1455223 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 1455223 8357331 Cpin_1215 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120914.1 1452848 D 485918 CDS YP_003120915.1 256420262 8357332 1455252..1456307 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; KEGG: aeh:Mlg_1501 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1456307 8357332 Cpin_1216 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003120915.1 1455252 D 485918 CDS YP_003120916.1 256420263 8357333 1456395..1458143 1 NC_013132.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1458143 aspS 8357333 aspS Chitinophaga pinensis DSM 2588 aspartyl-tRNA synthetase YP_003120916.1 1456395 D 485918 CDS YP_003120917.1 256420264 8357334 1458354..1458884 1 NC_013132.1 PFAM: Mannosyl-glycoprotein endo-beta-N- acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: hypothetical protein; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1458884 8357334 Cpin_1218 Chitinophaga pinensis DSM 2588 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_003120917.1 1458354 D 485918 CDS YP_003120918.1 256420265 8357335 1458930..1460375 1 NC_013132.1 KEGG: scl:sce6262 hypothetical protein; hypothetical protein 1460375 8357335 Cpin_1219 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120918.1 1458930 D 485918 CDS YP_003120919.1 256420266 8357336 1460347..1461621 1 NC_013132.1 KEGG: mxa:MXAN_6502 hypothetical protein; hypothetical protein 1461621 8357336 Cpin_1220 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120919.1 1460347 D 485918 CDS YP_003120920.1 256420267 8357337 1461618..1463102 1 NC_013132.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: scl:sce8408 membrane-bound polysaccharide acetyltransferase; membrane bound O-acyl transferase MBOAT family protein 1463102 8357337 Cpin_1221 Chitinophaga pinensis DSM 2588 membrane bound O-acyl transferase MBOAT family protein YP_003120920.1 1461618 D 485918 CDS YP_003120921.1 256420268 8357338 1463275..1464582 1 NC_013132.1 PFAM: phosphate-selective porin O and P; KEGG: acp:A2cp1_4149 phosphate-selective porin O and P; phosphate-selective porin O and P 1464582 8357338 Cpin_1222 Chitinophaga pinensis DSM 2588 phosphate-selective porin O and P YP_003120921.1 1463275 D 485918 CDS YP_003120922.1 256420269 8357339 complement(1464585..1465691) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: PAS/PAC sensor signal transduction histidine kinase ; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; histidine kinase 1465691 8357339 Cpin_1223 Chitinophaga pinensis DSM 2588 histidine kinase YP_003120922.1 1464585 R 485918 CDS YP_003120923.1 256420270 8357340 complement(1465778..1466461) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dvm:DvMF_0882 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1466461 8357340 Cpin_1224 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003120923.1 1465778 R 485918 CDS YP_003120924.1 256420271 8357341 complement(1466633..1467379) 1 NC_013132.1 PFAM: protein of unknown function DUF1003; KEGG: hypothetical protein; hypothetical protein 1467379 8357341 Cpin_1225 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120924.1 1466633 R 485918 CDS YP_003120925.1 256420272 8357342 1467505..1469706 1 NC_013132.1 hypothetical protein 1469706 8357342 Cpin_1226 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120925.1 1467505 D 485918 CDS YP_003120926.1 256420273 8357343 1469778..1471547 1 NC_013132.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aba:Acid345_2371 ABC transporter, ATPase subunit; ABC transporter 1471547 8357343 Cpin_1227 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120926.1 1469778 D 485918 CDS YP_003120927.1 256420274 8357344 1471596..1475369 1 NC_013132.1 PFAM: transglutaminase domain protein; TPR repeat- containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce7247 hypothetical protein; transglutaminase 1475369 8357344 Cpin_1228 Chitinophaga pinensis DSM 2588 transglutaminase YP_003120927.1 1471596 D 485918 CDS YP_003120928.1 256420275 8357345 1475497..1476639 1 NC_013132.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: mxa:MXAN_0402 ATP synthase F0, A subunit; ATP synthase F0 subunit A 1476639 8357345 Cpin_1229 Chitinophaga pinensis DSM 2588 ATP synthase F0 subunit A YP_003120928.1 1475497 D 485918 CDS YP_003120929.1 256420276 8357346 1476689..1476970 1 NC_013132.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: ank:AnaeK_4475 ATP synthase F0, C subunit; ATP synthase F0 subunit C 1476970 8357346 Cpin_1230 Chitinophaga pinensis DSM 2588 ATP synthase F0 subunit C YP_003120929.1 1476689 D 485918 CDS YP_003120930.1 256420277 8357347 1477088..1477582 1 NC_013132.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: yen:YE4210 F0F1 ATP synthase subunit B; ATP synthase F0 subunit B 1477582 8357347 Cpin_1231 Chitinophaga pinensis DSM 2588 ATP synthase F0 subunit B YP_003120930.1 1477088 D 485918 CDS YP_003120931.1 256420278 8357348 1477677..1478237 1 NC_013132.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: dal:Dalk_3629 ATP synthase F1, delta subunit; ATP synthase F1 subunit delta 1478237 8357348 Cpin_1232 Chitinophaga pinensis DSM 2588 ATP synthase F1 subunit delta YP_003120931.1 1477677 D 485918 CDS YP_003120932.1 256420279 8357349 1478324..1479901 1 NC_013132.1 KEGG: rce:RC1_2243 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha 1479901 8357349 Cpin_1233 Chitinophaga pinensis DSM 2588 ATP synthase F1 subunit alpha YP_003120932.1 1478324 D 485918 CDS YP_003120933.1 256420280 8357350 1480084..1482234 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: sus:Acid_7736 TonB-dependent receptor; TonB-dependent receptor plug 1482234 8357350 Cpin_1234 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003120933.1 1480084 D 485918 CDS YP_003120934.1 256420281 8357351 1482287..1482934 1 NC_013132.1 KEGG: she:Shewmr4_3619 hypothetical protein; hypothetical protein 1482934 8357351 Cpin_1235 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120934.1 1482287 D 485918 CDS YP_003120935.1 256420282 8357352 1483209..1484054 1 NC_013132.1 KEGG: bvi:Bcep1808_3323 MerR family transcriptional regulator; polyketide biosynthesis O-methyltransferase 1484054 8357352 Cpin_1236 Chitinophaga pinensis DSM 2588 polyketide biosynthesis O-methyltransferase YP_003120935.1 1483209 D 485918 CDS YP_003120936.1 256420283 8357353 complement(1484126..1485190) 1 NC_013132.1 KEGG: dal:Dalk_5293 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 1485190 8357353 Cpin_1237 Chitinophaga pinensis DSM 2588 4-hydroxythreonine-4-phosphate dehydrogenase YP_003120936.1 1484126 R 485918 CDS YP_003120937.1 256420284 8357354 1485304..1486053 1 NC_013132.1 KEGG: sml:Smlt0818 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase 1486053 8357354 Cpin_1238 Chitinophaga pinensis DSM 2588 dimethyladenosine transferase YP_003120937.1 1485304 D 485918 CDS YP_003120938.1 256420285 8357355 1486050..1486979 1 NC_013132.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mag:amb3193 D-3-phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1486979 8357355 Cpin_1239 Chitinophaga pinensis DSM 2588 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_003120938.1 1486050 D 485918 CDS YP_003120939.1 256420286 8357356 1487152..1487625 1 NC_013132.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: tcx:Tcr_0880 GreA/GreB family elongation factor; transcription elongation factor GreA 1487625 8357356 Cpin_1240 Chitinophaga pinensis DSM 2588 transcription elongation factor GreA YP_003120939.1 1487152 D 485918 CDS YP_003120940.1 256420287 8357357 1487716..1488111 1 NC_013132.1 PFAM: histidine triad (HIT) protein; KEGG: hypothetical protein; histidine triad (HIT) protein 1488111 8357357 Cpin_1241 Chitinophaga pinensis DSM 2588 histidine triad (HIT) protein YP_003120940.1 1487716 D 485918 CDS YP_003120941.1 256420288 8357358 complement(1488089..1488793) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: hypothetical protein; winged helix family two component transcriptional regulator 1488793 8357358 Cpin_1242 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003120941.1 1488089 R 485918 CDS YP_003120942.1 256420289 8357359 complement(1488952..1489560) 1 NC_013132.1 KEGG: pha:PSHAa1877 Holliday junction nuclease; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1489560 8357359 Cpin_1243 Chitinophaga pinensis DSM 2588 crossover junction endodeoxyribonuclease RuvC YP_003120942.1 1488952 R 485918 CDS YP_003120943.1 256420290 8357360 1489667..1490536 1 NC_013132.1 KEGG: psp:PSPPH_2876 integral membrane protein; hypothetical protein 1490536 8357360 Cpin_1244 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120943.1 1489667 D 485918 CDS YP_003120944.1 256420291 8357361 1490548..1491342 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1491342 8357361 Cpin_1245 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120944.1 1490548 D 485918 CDS YP_003120945.1 256420292 8357362 1491465..1492166 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: hypothetical protein; winged helix family two component transcriptional regulator 1492166 8357362 Cpin_1246 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003120945.1 1491465 D 485918 CDS YP_003120946.1 256420293 8357363 1492267..1492974 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1492974 8357363 Cpin_1247 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003120946.1 1492267 D 485918 CDS YP_003120947.1 256420294 8357364 1492971..1494347 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: tdn:Suden_0316 histidine kinase; histidine kinase 1494347 8357364 Cpin_1248 Chitinophaga pinensis DSM 2588 histidine kinase YP_003120947.1 1492971 D 485918 CDS YP_003120948.1 256420295 8357365 1494497..1494976 1 NC_013132.1 hypothetical protein 1494976 8357365 Cpin_1249 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120948.1 1494497 D 485918 CDS YP_003120949.1 256420296 8357366 1494997..1495914 1 NC_013132.1 PFAM: protein of unknown function UPF0187; KEGG: bid:Bind_3402 hypothetical protein; hypothetical protein 1495914 8357366 Cpin_1250 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120949.1 1494997 D 485918 CDS YP_003120950.1 256420297 8357367 complement(1496124..1497191) 1 NC_013132.1 KEGG: bpt:Bpet0901 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 1497191 8357367 Cpin_1251 Chitinophaga pinensis DSM 2588 Holliday junction DNA helicase RuvB YP_003120950.1 1496124 R 485918 CDS YP_003120951.1 256420298 8357368 1497267..1498571 1 NC_013132.1 PFAM: peptidase M28; KEGG: cps:CPS_2188 M23B family peptidase; peptidase M28 1498571 8357368 Cpin_1252 Chitinophaga pinensis DSM 2588 peptidase M28 YP_003120951.1 1497267 D 485918 CDS YP_003120952.1 256420299 8357369 complement(1498575..1499249) 1 NC_013132.1 PFAM: peptidase M23; KEGG: sme:SM_b20973 hypothetical protein; peptidase M23 1499249 8357369 Cpin_1253 Chitinophaga pinensis DSM 2588 peptidase M23 YP_003120952.1 1498575 R 485918 CDS YP_003120953.1 256420300 8357370 complement(1499472..1502240) 1 NC_013132.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1502240 leuS 8357370 leuS Chitinophaga pinensis DSM 2588 leucyl-tRNA synthetase YP_003120953.1 1499472 R 485918 CDS YP_003120954.1 256420301 8357371 1502380..1503255 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sfr:Sfri_0277 protein of unknown function DUF214; hypothetical protein 1503255 8357371 Cpin_1255 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120954.1 1502380 D 485918 CDS YP_003120955.1 256420302 8357372 1503282..1503548 1 NC_013132.1 hypothetical protein 1503548 8357372 Cpin_1256 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120955.1 1503282 D 485918 CDS YP_003120956.1 256420303 8357373 1503645..1504445 1 NC_013132.1 KEGG: bba:Bd2694 bacitracin resistance protein; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 1504445 8357373 Cpin_1257 Chitinophaga pinensis DSM 2588 undecaprenol kinase YP_003120956.1 1503645 D 485918 CDS YP_003120957.1 256420304 8357374 1504508..1505743 1 NC_013132.1 hypothetical protein 1505743 8357374 Cpin_1258 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120957.1 1504508 D 485918 CDS YP_003120958.1 256420305 8357375 complement(1505740..1506957) 1 NC_013132.1 PFAM: alanine dehydrogenase; KEGG: cvi:CV_2022 alanine dehydrogenase; alanine dehydrogenase 1506957 8357375 Cpin_1259 Chitinophaga pinensis DSM 2588 alanine dehydrogenase YP_003120958.1 1505740 R 485918 CDS YP_003120959.1 256420306 8357376 complement(1507025..1507447) 1 NC_013132.1 PFAM: protein of unknown function UPF0079; KEGG: fph:Fphi_0546 hypothetical protein; hypothetical protein 1507447 8357376 Cpin_1260 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120959.1 1507025 R 485918 CDS YP_003120960.1 256420307 8357377 1507643..1509748 1 NC_013132.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; haloacid dehalogenase; KEGG: dal:Dalk_3003 heavy metal translocating P- type ATPase; heavy metal translocating P-type ATPase 1509748 8357377 Cpin_1261 Chitinophaga pinensis DSM 2588 heavy metal translocating P-type ATPase YP_003120960.1 1507643 D 485918 CDS YP_003120961.1 256420308 8357378 1509798..1511702 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: ATP-dependent DNA helicase RecQ; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; ATP-dependent DNA helicase RecQ 1511702 8357378 Cpin_1262 Chitinophaga pinensis DSM 2588 ATP-dependent DNA helicase RecQ YP_003120961.1 1509798 D 485918 CDS YP_003120962.1 256420309 8357379 complement(1511775..1512821) 1 NC_013132.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pmu:PM0652 hypothetical protein; oxidoreductase domain-containing protein 1512821 8357379 Cpin_1263 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003120962.1 1511775 R 485918 CDS YP_003120963.1 256420310 8357380 complement(1512989..1513390) 1 NC_013132.1 PFAM: protein of unknown function DUF1573; KEGG: pca:Pcar_2548 hypothetical protein; hypothetical protein 1513390 8357380 Cpin_1264 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120963.1 1512989 R 485918 CDS YP_003120964.1 256420311 8357381 1513495..1514781 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: tdn:Suden_0329 oxidoreductase like protein; aldo/keto reductase 1514781 8357381 Cpin_1265 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003120964.1 1513495 D 485918 CDS YP_003120965.1 256420312 8357382 1514893..1516131 1 NC_013132.1 hypothetical protein 1516131 8357382 Cpin_1266 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120965.1 1514893 D 485918 CDS YP_003120966.1 256420313 8357383 1516175..1518592 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00858 TonB-dependent receptor; TonB-dependent receptor 1518592 8357383 Cpin_1267 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003120966.1 1516175 D 485918 CDS YP_003120967.1 256420314 8357384 1518678..1518848 1 NC_013132.1 hypothetical protein 1518848 8357384 Cpin_1268 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120967.1 1518678 D 485918 CDS YP_003120968.1 256420315 8357385 1518928..1519656 1 NC_013132.1 PFAM: methyltransferase type 12; KEGG: conserved hypothetical protein, possible methylase; type 12 methyltransferase 1519656 8357385 Cpin_1269 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003120968.1 1518928 D 485918 CDS YP_003120969.1 256420316 8357386 1519662..1521068 1 NC_013132.1 KEGG: similar to chromosome 9 open reading frame 41; hypothetical protein 1521068 8357386 Cpin_1270 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120969.1 1519662 D 485918 CDS YP_003120970.1 256420317 8357387 1521089..1523302 1 NC_013132.1 PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eba:ebA1666 fusion of ABC transporter-type transmembrane and ATP binding protein; ABC transporter 1523302 8357387 Cpin_1271 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120970.1 1521089 D 485918 CDS YP_003120971.1 256420318 8357388 1523299..1523466 1 NC_013132.1 hypothetical protein 1523466 8357388 Cpin_1272 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120971.1 1523299 D 485918 CDS YP_003120972.1 256420319 8357389 complement(1523513..1525075) 1 NC_013132.1 PFAM: protein of unknown function DUF853 NPT hydrolase KEGG: lpn:lpg0269 hypothetical protein; hypothetical protein 1525075 8357389 Cpin_1273 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120972.1 1523513 R 485918 CDS YP_003120973.1 256420320 8357390 complement(1525209..1525589) 1 NC_013132.1 PFAM: chaperonin Cpn10; KEGG: bsu:BSU06020 co-chaperonin GroES; chaperonin Cpn10 1525589 8357390 Cpin_1274 Chitinophaga pinensis DSM 2588 chaperonin Cpn10 YP_003120973.1 1525209 R 485918 CDS YP_003120974.1 256420321 8357391 complement(1525662..1526501) 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: bba:Bd2896 metal-dependent hydrolase; beta-lactamase domain-containing protein 1526501 8357391 Cpin_1275 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003120974.1 1525662 R 485918 CDS YP_003120975.1 256420322 8357392 complement(1526540..1527835) 1 NC_013132.1 KEGG: bcr:BCAH187_A0507 hypothetical protein; hypothetical protein 1527835 8357392 Cpin_1276 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120975.1 1526540 R 485918 CDS YP_003120976.1 256420323 8357393 complement(1527917..1528534) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU40620 hypothetical protein; ABC transporter 1528534 8357393 Cpin_1277 Chitinophaga pinensis DSM 2588 ABC transporter YP_003120976.1 1527917 R 485918 CDS YP_003120977.1 256420324 8357394 complement(1528531..1529325) 1 NC_013132.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1529325 8357394 Cpin_1278 Chitinophaga pinensis DSM 2588 UDP-N-acetylglucosamine acyltransferase YP_003120977.1 1528531 R 485918 CDS YP_003120978.1 256420325 8357395 complement(1529335..1530750) 1 NC_013132.1 catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase 1530750 8357395 Cpin_1279 Chitinophaga pinensis DSM 2588 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase YP_003120978.1 1529335 R 485918 CDS YP_003120979.1 256420326 8357396 complement(1530783..1531832) 1 NC_013132.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase LpxD; transferase hexapeptide repeat containing protein; KEGG: sat:SYN_01568 UDP-3-O-[3-hydroxymyristoyl] glucosamine; UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase 1531832 8357396 Cpin_1280 Chitinophaga pinensis DSM 2588 UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase YP_003120979.1 1530783 R 485918 CDS YP_003120980.1 256420327 8357397 complement(1531934..1533160) 1 NC_013132.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bha:BH3818 hypothetical protein; metal dependent phosphohydrolase 1533160 8357397 Cpin_1281 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003120980.1 1531934 R 485918 CDS YP_003120981.1 256420328 8357398 1533455..1535008 1 NC_013132.1 PFAM: response regulator receiver; PglZ domain protein; SMART: response regulator receiver; KEGG: gsu:GSU2915 sigma-54 dependent DNA-binding response regulator; response regulator receiver protein 1535008 8357398 Cpin_1282 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003120981.1 1533455 D 485918 CDS YP_003120982.1 256420329 8357399 1535040..1535372 1 NC_013132.1 hypothetical protein 1535372 8357399 Cpin_1283 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120982.1 1535040 D 485918 CDS YP_003120983.1 256420330 8357400 1535369..1536133 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: sus:Acid_1840 beta-lactamase domain- containing protein; beta-lactamase domain-containing protein 1536133 8357400 Cpin_1284 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003120983.1 1535369 D 485918 CDS YP_003120984.1 256420331 8357401 1536175..1536441 1 NC_013132.1 hypothetical protein 1536441 8357401 Cpin_1285 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120984.1 1536175 D 485918 CDS YP_003120985.1 256420332 8357402 1536438..1536800 1 NC_013132.1 hypothetical protein 1536800 8357402 Cpin_1286 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120985.1 1536438 D 485918 CDS YP_003120986.1 256420333 8357403 1537236..1538156 1 NC_013132.1 KEGG: EEPD1; endonuclease/exonuclease/phosphatase family domain containing 1; DNA uptake protein and related DNA-binding protein 1538156 8357403 Cpin_1287 Chitinophaga pinensis DSM 2588 DNA uptake protein and related DNA-binding protein YP_003120986.1 1537236 D 485918 CDS YP_003120987.1 256420334 8357404 1538153..1539292 1 NC_013132.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: aba:Acid345_2369 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 1539292 8357404 Cpin_1288 Chitinophaga pinensis DSM 2588 acyl-CoA dehydrogenase domain-containing protein YP_003120987.1 1538153 D 485918 CDS YP_003120988.1 256420335 8357405 1539495..1541120 1 NC_013132.1 PFAM: aldehyde dehydrogenase; KEGG: bmj:BMULJ_03357 NAD-dependent aldehyde dehydrogenase; aldehyde dehydrogenase 1541120 8357405 Cpin_1289 Chitinophaga pinensis DSM 2588 aldehyde dehydrogenase YP_003120988.1 1539495 D 485918 CDS YP_003120989.1 256420336 8357406 complement(1541533..1541742) 1 NC_013132.1 hypothetical protein 1541742 8357406 Cpin_1290 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120989.1 1541533 R 485918 CDS YP_003120990.1 256420337 8357407 1541787..1542179 1 NC_013132.1 hypothetical protein 1542179 8357407 Cpin_1291 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120990.1 1541787 D 485918 CDS YP_003120991.1 256420338 8357408 1542380..1543393 1 NC_013132.1 hypothetical protein 1543393 8357408 Cpin_1292 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120991.1 1542380 D 485918 CDS YP_003120992.1 256420339 8357409 complement(1543463..1544698) 1 NC_013132.1 KEGG: maq:Maqu_1839 ATP-dependent protease ATP- binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA 1544698 8357409 Cpin_1293 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003120992.1 1543463 R 485918 CDS YP_003120993.1 256420340 8357410 complement(1544801..1545505) 1 NC_013132.1 PFAM: peptidase S14 ClpP; KEGG: pol:Bpro_2030 ATP-dependent Clp protease, proteolytic subunit ClpP; endopeptidase Clp 1545505 8357410 Cpin_1294 Chitinophaga pinensis DSM 2588 endopeptidase Clp YP_003120993.1 1544801 R 485918 CDS YP_003120994.1 256420341 8357411 complement(1545495..1546871) 1 NC_013132.1 TIGRFAM: trigger factor; PFAM: trigger factor domain; KEGG: gox:GOX0088 trigger factor; trigger factor 1546871 8357411 Cpin_1295 Chitinophaga pinensis DSM 2588 trigger factor YP_003120994.1 1545495 R 485918 CDS YP_003120995.1 256420342 8357413 complement(1547282..1548199) 1 NC_013132.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: pen:PSEEN2606 arginase; arginase/agmatinase/formiminoglutamase 1548199 8357413 Cpin_1296 Chitinophaga pinensis DSM 2588 arginase/agmatinase/formiminoglutamase YP_003120995.1 1547282 R 485918 CDS YP_003120996.1 256420343 8357414 complement(1548290..1549522) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_0966 transport protein; major facilitator superfamily protein 1549522 8357414 Cpin_1297 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003120996.1 1548290 R 485918 CDS YP_003120997.1 256420344 8357415 complement(1549534..1550703) 1 NC_013132.1 KEGG: dps:DP0454 IAA-amino acid hydrolase [precursor]; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1550703 8357415 Cpin_1298 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003120997.1 1549534 R 485918 CDS YP_003120998.1 256420345 8357416 complement(1550721..1551725) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH1906 AraC/XylS family transcriptional regulator; AraC family transcriptional regulator 1551725 8357416 Cpin_1299 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003120998.1 1550721 R 485918 CDS YP_003120999.1 256420346 8357417 complement(1551833..1552999) 1 NC_013132.1 KEGG: sus:Acid_4280 hypothetical protein; hypothetical protein 1552999 8357417 Cpin_1300 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003120999.1 1551833 R 485918 CDS YP_003121000.1 256420347 8357418 1553123..1553482 1 NC_013132.1 KEGG: bba:Bd1375 hypothetical protein; hypothetical protein 1553482 8357418 Cpin_1301 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121000.1 1553123 D 485918 CDS YP_003121001.1 256420348 8357419 1553525..1554394 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spl:Spea_2717 AraC family transcriptional regulator; AraC family transcriptional regulator 1554394 8357419 Cpin_1302 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121001.1 1553525 D 485918 CDS YP_003121002.1 256420349 8357420 1554479..1555114 1 NC_013132.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: cja:CJA_0569 TonB system transport protein ExbD2; biopolymer transport protein ExbD/TolR 1555114 8357420 Cpin_1303 Chitinophaga pinensis DSM 2588 biopolymer transport protein ExbD/TolR YP_003121002.1 1554479 D 485918 CDS YP_003121003.1 256420350 8357421 complement(1555165..1555647) 1 NC_013132.1 KEGG: swd:Swoo_0390 hypothetical protein; hypothetical protein 1555647 8357421 Cpin_1304 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121003.1 1555165 R 485918 CDS YP_003121004.1 256420351 8357422 1555831..1557762 1 NC_013132.1 PFAM: gamma-glutamyltranspeptidase; KEGG: sus:Acid_4698 gamma-glutamyltransferase; gamma-glutamyltransferase 1557762 8357422 Cpin_1305 Chitinophaga pinensis DSM 2588 gamma-glutamyltransferase YP_003121004.1 1555831 D 485918 CDS YP_003121005.1 256420352 8357423 complement(1557842..1561144) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: xac:XAC2672 Oar protein; TonB-dependent receptor plug 1561144 8357423 Cpin_1306 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121005.1 1557842 R 485918 CDS YP_003121006.1 256420353 8357424 complement(1561524..1562861) 1 NC_013132.1 PFAM: amino acid permease-associated region; KEGG: cvi:CV_3432 amino acid permease; amino acid permease-associated protein 1562861 8357424 Cpin_1307 Chitinophaga pinensis DSM 2588 amino acid permease-associated protein YP_003121006.1 1561524 R 485918 CDS YP_003121007.1 256420354 8357426 complement(1563256..1564635) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_0738 major facilitator superfamily MFS_1; major facilitator superfamily protein 1564635 8357426 Cpin_1308 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003121007.1 1563256 R 485918 CDS YP_003121008.1 256420355 8357427 complement(1565041..1566627) 1 NC_013132.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_1573 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter 1566627 8357427 Cpin_1309 Chitinophaga pinensis DSM 2588 EmrB/QacA subfamily drug resistance transporter YP_003121008.1 1565041 R 485918 CDS YP_003121009.1 256420356 8357428 1567518..1568252 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sus:Acid_0395 fis family transcriptional regulator; AraC family transcriptional regulator 1568252 8357428 Cpin_1310 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121009.1 1567518 D 485918 CDS YP_003121010.1 256420357 8357429 1568335..1568712 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mxa:MXAN_3659 glyoxalase family protein; bleomycin resistance protein 1568712 8357429 Cpin_1311 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003121010.1 1568335 D 485918 CDS YP_003121011.1 256420358 8357430 1568861..1569904 1 NC_013132.1 KEGG: cps:CPS_4814 hypothetical protein; hypothetical protein 1569904 8357430 Cpin_1312 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121011.1 1568861 D 485918 CDS YP_003121012.1 256420359 8357431 complement(1570015..1571019) 1 NC_013132.1 KEGG: mxa:MXAN_2791 protease B; hypothetical protein 1571019 8357431 Cpin_1313 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121012.1 1570015 R 485918 CDS YP_003121013.1 256420360 8357432 complement(1571343..1571759) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_1029 response regulator receiver protein; response regulator receiver protein 1571759 8357432 Cpin_1314 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121013.1 1571343 R 485918 CDS YP_003121014.1 256420361 8357433 complement(1571743..1572840) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: scl:sce4026 sensor histidine kinase/response regulator hybrid; response regulator receiver sensor signal transduction histidine kinase 1572840 8357433 Cpin_1315 Chitinophaga pinensis DSM 2588 response regulator receiver sensor signal transduction histidine kinase YP_003121014.1 1571743 R 485918 CDS YP_003121015.1 256420362 8357434 complement(1572906..1575032) 1 NC_013132.1 PFAM: hypothetical protein; Diverse 7TM receptor extracellular region 2; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: glo:Glov_0071 integral membrane sensor signal transduction histidine kinase; hypothetical protein 1575032 8357434 Cpin_1316 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121015.1 1572906 R 485918 CDS YP_003121016.1 256420363 8357435 complement(1575053..1575763) 1 NC_013132.1 hypothetical protein 1575763 8357435 Cpin_1317 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121016.1 1575053 R 485918 CDS YP_003121017.1 256420364 8357436 complement(1575870..1576985) 1 NC_013132.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: scl:sce6403 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 1576985 8357436 Cpin_1318 Chitinophaga pinensis DSM 2588 UBA/THIF-type NAD/FAD binding protein YP_003121017.1 1575870 R 485918 CDS YP_003121018.1 256420365 8357437 1577001..1577159 1 NC_013132.1 hypothetical protein 1577159 8357437 Cpin_1319 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121018.1 1577001 D 485918 CDS YP_003121019.1 256420366 8357438 1577391..1578131 1 NC_013132.1 PFAM: manganese and iron superoxide dismutase; KEGG: xom:XOO_2684 superoxidase dismutase; superoxide dismutase 1578131 8357438 Cpin_1320 Chitinophaga pinensis DSM 2588 superoxide dismutase YP_003121019.1 1577391 D 485918 CDS YP_003121020.1 256420367 8357439 complement(1578194..1579819) 1 NC_013132.1 PFAM: glycosyl transferase family 39; KEGG: nis:NIS_1418 glycosyl transferase; glycosyl transferase family protein 1579819 8357439 Cpin_1321 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003121020.1 1578194 R 485918 CDS YP_003121021.1 256420368 8357440 complement(1579848..1580510) 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bcb:BCB4264_A4871 PAP2 family protein; PA-phosphatase-like phosphoesterase 1580510 8357440 Cpin_1322 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003121021.1 1579848 R 485918 CDS YP_003121022.1 256420369 8357441 complement(1580672..1582108) 1 NC_013132.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sat:SYN_00414 permease; YjgP/YjgQ family permease 1582108 8357441 Cpin_1323 Chitinophaga pinensis DSM 2588 YjgP/YjgQ family permease YP_003121022.1 1580672 R 485918 CDS YP_003121023.1 256420370 8357442 1582286..1582900 1 NC_013132.1 hypothetical protein 1582900 8357442 Cpin_1324 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121023.1 1582286 D 485918 CDS YP_003121024.1 256420371 8357443 complement(1582916..1583296) 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 1583296 8357443 Cpin_1325 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003121024.1 1582916 R 485918 CDS YP_003121025.1 256420372 8357444 1583660..1584535 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 1.2; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD; RpoD subfamily RNA polymerase sigma-70 subunit 1584535 8357444 Cpin_1326 Chitinophaga pinensis DSM 2588 RpoD subfamily RNA polymerase sigma-70 subunit YP_003121025.1 1583660 D 485918 CDS YP_003121026.1 256420373 8357445 1584757..1586082 1 NC_013132.1 KEGG: gme:Gmet_2872 signal recognition particle subunit FFH/SRP54 (SRP54); TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 1586082 8357445 Cpin_1327 Chitinophaga pinensis DSM 2588 signal recognition particle protein YP_003121026.1 1584757 D 485918 CDS YP_003121027.1 256420374 8357446 1586212..1586652 1 NC_013132.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: bcy:Bcer98_2496 30S ribosomal protein S16; 30S ribosomal protein S16 1586652 8357446 Cpin_1328 Chitinophaga pinensis DSM 2588 30S ribosomal protein S16 YP_003121027.1 1586212 D 485918 CDS YP_003121028.1 256420375 8357447 1586734..1587255 1 NC_013132.1 TIGRFAM: 16S rRNA processing protein RimM; KEGG: dde:Dde_1097 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 1587255 8357447 Cpin_1329 Chitinophaga pinensis DSM 2588 16S rRNA processing protein RimM YP_003121028.1 1586734 D 485918 CDS YP_003121029.1 256420376 8357448 1587312..1587983 1 NC_013132.1 KEGG: sat:SYN_00768 tRNA (guanine-N(1)-)- methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 1587983 8357448 Cpin_1330 Chitinophaga pinensis DSM 2588 tRNA (guanine-N1)-methyltransferase YP_003121029.1 1587312 D 485918 CDS YP_003121030.1 256420377 8357449 1588093..1588440 1 NC_013132.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: pca:Pcar_2219 50S ribosomal protein L19; 50S ribosomal protein L19 1588440 8357449 Cpin_1331 Chitinophaga pinensis DSM 2588 50S ribosomal protein L19 YP_003121030.1 1588093 D 485918 CDS YP_003121031.1 256420378 8357450 1588631..1588864 1 NC_013132.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: dal:Dalk_1771 twin-arginine translocation protein, TatA/E family subunit; twin-arginine translocation protein, TatA/E family subunit 1588864 8357450 Cpin_1332 Chitinophaga pinensis DSM 2588 twin-arginine translocation protein, TatA/E family subunit YP_003121031.1 1588631 D 485918 CDS YP_003121032.1 256420379 8357451 1589062..1590501 1 NC_013132.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1590501 gatA 8357451 gatA Chitinophaga pinensis DSM 2588 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_003121032.1 1589062 D 485918 CDS YP_003121033.1 256420380 8357452 1590515..1591870 1 NC_013132.1 PFAM: lytic transglycosylase catalytic; KEGG: aba:Acid345_0549 lytic transglycosylase, catalytic; lytic transglycosylase 1591870 8357452 Cpin_1334 Chitinophaga pinensis DSM 2588 lytic transglycosylase YP_003121033.1 1590515 D 485918 CDS YP_003121034.1 256420381 8357453 complement(1592138..1593586) 1 NC_013132.1 PFAM: sodium/hydrogen exchanger; KEGG: scl:sce2508 cation/hydrogen exchanger; sodium/hydrogen exchanger 1593586 8357453 Cpin_1335 Chitinophaga pinensis DSM 2588 sodium/hydrogen exchanger YP_003121034.1 1592138 R 485918 CDS YP_003121035.1 256420382 8357454 1593718..1596252 1 NC_013132.1 KEGG: sus:Acid_6235 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phosphocholine-specific phospholipase C 1596252 8357454 Cpin_1336 Chitinophaga pinensis DSM 2588 phosphocholine-specific phospholipase C YP_003121035.1 1593718 D 485918 CDS YP_003121036.1 256420383 8357455 1596290..1597006 1 NC_013132.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1597006 fabG 8357455 fabG Chitinophaga pinensis DSM 2588 3-ketoacyl-ACP reductase YP_003121036.1 1596290 D 485918 CDS YP_003121037.1 256420384 8357456 complement(1597086..1597511) 1 NC_013132.1 KEGG: tcx:Tcr_1625 Fe-S metabolism associated SufE; hypothetical protein 1597511 8357456 Cpin_1338 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121037.1 1597086 R 485918 CDS YP_003121038.1 256420385 8357457 complement(1597890..1598918) 1 NC_013132.1 PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein; KWG repeat-containing protein 1598918 8357457 Cpin_1339 Chitinophaga pinensis DSM 2588 KWG repeat-containing protein YP_003121038.1 1597890 R 485918 CDS YP_003121039.1 256420386 8357458 complement(1598915..1599877) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1599877 8357458 Cpin_1340 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121039.1 1598915 R 485918 CDS YP_003121040.1 256420387 8357459 complement(1599917..1602055) 1 NC_013132.1 KEGG: bcy:Bcer98_0358 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase III 1602055 8357459 Cpin_1341 Chitinophaga pinensis DSM 2588 DNA topoisomerase III YP_003121040.1 1599917 R 485918 CDS YP_003121041.1 256420388 8357460 complement(1602102..1603772) 1 NC_013132.1 PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; response regulator receiver modulated FAD- dependent pyridine nucleotide-disulfide oxidoreductase 1603772 8357460 Cpin_1342 Chitinophaga pinensis DSM 2588 response regulator receiver modulated FAD- dependent pyridine nucleotide-disulfide oxidoreductase YP_003121041.1 1602102 R 485918 CDS YP_003121042.1 256420389 8357461 complement(1603913..1605319) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; SMART: ATP-binding region ATPase domain protein; KEGG: sus:Acid_0438 cyclic nucleotide-binding protein; histidine kinase 1605319 8357461 Cpin_1343 Chitinophaga pinensis DSM 2588 histidine kinase YP_003121042.1 1603913 R 485918 CDS YP_003121043.1 256420390 8357462 complement(1605349..1605465) 1 NC_013132.1 hypothetical protein 1605465 8357462 Cpin_1344 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121043.1 1605349 R 485918 CDS YP_003121044.1 256420391 8357463 complement(1605557..1606606) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: pfo:Pfl01_3998 esterase/lipase/thioesterase; alpha/beta hydrolase 1606606 8357463 Cpin_1345 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003121044.1 1605557 R 485918 CDS YP_003121045.1 256420392 8357464 complement(1606769..1607701) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_3605 hypothetical protein; AraC family transcriptional regulator 1607701 8357464 Cpin_1346 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121045.1 1606769 R 485918 CDS YP_003121046.1 256420393 8357465 1608067..1611315 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; GAF domain protein; KEGG: sus:Acid_2052 NifA subfamily transcriptional regulator; Fis family transcriptional regulator 1611315 8357465 Cpin_1347 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003121046.1 1608067 D 485918 CDS YP_003121047.1 256420394 8357466 1611392..1612777 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: gur:Gura_0085 two component, sigma-54 specific, fis family transcriptional regulator; Fis family two component sigma-54 specific transcriptional regulator 1612777 8357466 Cpin_1348 Chitinophaga pinensis DSM 2588 Fis family two component sigma-54 specific transcriptional regulator YP_003121047.1 1611392 D 485918 CDS YP_003121048.1 256420395 8357467 1612862..1613638 1 NC_013132.1 KEGG: swi:Swit_5292 hypothetical protein; hypothetical protein 1613638 8357467 Cpin_1349 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121048.1 1612862 D 485918 CDS YP_003121049.1 256420396 8357468 1613663..1614079 1 NC_013132.1 PFAM: OsmC family protein; KEGG: sal:Sala_2374 OsmC-like protein; OsmC family protein 1614079 8357468 Cpin_1350 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003121049.1 1613663 D 485918 CDS YP_003121050.1 256420397 8357469 complement(1614121..1614975) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pat:Patl_3892 AraC family transcriptional regulator; AraC family transcriptional regulator 1614975 8357469 Cpin_1351 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121050.1 1614121 R 485918 CDS YP_003121051.1 256420398 8357470 complement(1615332..1616669) 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: aba:Acid345_4311 dehydrogenases related protein; oxidoreductase domain-containing protein 1616669 8357470 Cpin_1352 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003121051.1 1615332 R 485918 CDS YP_003121052.1 256420399 8357471 complement(1616843..1618207) 1 NC_013132.1 hypothetical protein 1618207 8357471 Cpin_1353 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121052.1 1616843 R 485918 CDS YP_003121053.1 256420400 8357472 complement(1618219..1621911) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 1621911 8357472 Cpin_1354 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121053.1 1618219 R 485918 CDS YP_003121054.1 256420401 8357473 complement(1622024..1623088) 1 NC_013132.1 PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 1623088 8357473 Cpin_1355 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121054.1 1622024 R 485918 CDS YP_003121055.1 256420402 8357474 complement(1623095..1625341) 1 NC_013132.1 KEGG: mca:MCA3077 ABC transporter, permease protein; copper ABC transporter permease 1625341 8357474 Cpin_1356 Chitinophaga pinensis DSM 2588 copper ABC transporter permease YP_003121055.1 1623095 R 485918 CDS YP_003121056.1 256420403 8357475 complement(1625338..1626267) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2644 ABC transporter, ATPase subunit; ABC transporter ATPase 1626267 8357475 Cpin_1357 Chitinophaga pinensis DSM 2588 ABC transporter ATPase YP_003121056.1 1625338 R 485918 CDS YP_003121057.1 256420404 8357476 complement(1626373..1626954) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bbt:BBta_3011 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 1626954 8357476 Cpin_1358 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121057.1 1626373 R 485918 CDS YP_003121058.1 256420405 8357478 complement(1627371..1627928) 1 NC_013132.1 hypothetical protein 1627928 8357478 Cpin_1360 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121058.1 1627371 R 485918 CDS YP_003121059.1 256420406 8357479 1628088..1628216 1 NC_013132.1 hypothetical protein 1628216 8357479 Cpin_1361 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121059.1 1628088 D 485918 CDS YP_003121060.1 256420407 8357480 1628347..1628802 1 NC_013132.1 PFAM: MaoC domain protein dehydratase; KEGG: hne:HNE_1169 MaoC family protein; MaoC domain-containing protein dehydratase 1628802 8357480 Cpin_1362 Chitinophaga pinensis DSM 2588 MaoC domain-containing protein dehydratase YP_003121060.1 1628347 D 485918 CDS YP_003121061.1 256420408 8357481 1629371..1630906 1 NC_013132.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: dehydrogenase; glucose-methanol-choline oxidoreductase 1630906 8357481 Cpin_1363 Chitinophaga pinensis DSM 2588 glucose-methanol-choline oxidoreductase YP_003121061.1 1629371 D 485918 CDS YP_003121062.1 256420409 8357482 1630913..1631905 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: mag:amb0131 dehydrogenase and related protein; oxidoreductase domain-containing protein 1631905 8357482 Cpin_1364 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003121062.1 1630913 D 485918 CDS YP_003121063.1 256420410 8357483 complement(1631914..1633038) 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: ilo:IL0119 hypothetical protein; hypothetical protein 1633038 8357483 Cpin_1365 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121063.1 1631914 R 485918 CDS YP_003121064.1 256420411 8357484 1633239..1633844 1 NC_013132.1 hypothetical protein 1633844 8357484 Cpin_1366 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121064.1 1633239 D 485918 CDS YP_003121065.1 256420412 8357486 1634130..1634516 1 NC_013132.1 PFAM: response regulator receiver; KEGG: sde:Sde_2630 response regulator receiver domain-containing protein; response regulator receiver protein 1634516 8357486 Cpin_1367 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121065.1 1634130 D 485918 CDS YP_003121066.1 256420413 8357487 1634799..1636097 1 NC_013132.1 hypothetical protein 1636097 8357487 Cpin_1368 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121066.1 1634799 D 485918 CDS YP_003121067.1 256420414 8357488 complement(1636091..1637353) 1 NC_013132.1 PFAM: chloride channel core; KEGG: dal:Dalk_2865 chloride channel core; chloride channel core 1637353 8357488 Cpin_1369 Chitinophaga pinensis DSM 2588 chloride channel core YP_003121067.1 1636091 R 485918 CDS YP_003121068.1 256420415 8357489 complement(1637450..1638292) 1 NC_013132.1 PFAM: dienelactone hydrolase; KEGG: nmu:Nmul_A0914 dienelactone hydrolase; dienelactone hydrolase 1638292 8357489 Cpin_1370 Chitinophaga pinensis DSM 2588 dienelactone hydrolase YP_003121068.1 1637450 R 485918 CDS YP_003121069.1 256420416 8357490 1638442..1639992 1 NC_013132.1 KEGG: sus:Acid_3355 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1639992 8357490 Cpin_1371 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003121069.1 1638442 D 485918 CDS YP_003121070.1 256420417 8357491 complement(1639996..1640400) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: har:HEAR0928 response regulator receiver (Che-Y like); response regulator receiver protein 1640400 8357491 Cpin_1372 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121070.1 1639996 R 485918 CDS YP_003121071.1 256420418 8357492 complement(1640509..1641309) 1 NC_013132.1 KEGG: net:Neut_1863 hypothetical protein; hypothetical protein 1641309 8357492 Cpin_1373 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121071.1 1640509 R 485918 CDS YP_003121072.1 256420419 8357493 complement(1641433..1642209) 1 NC_013132.1 KEGG: cvi:CV_0096 hypothetical protein; hypothetical protein 1642209 8357493 Cpin_1374 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121072.1 1641433 R 485918 CDS YP_003121073.1 256420420 8357494 complement(1642364..1642861) 1 NC_013132.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bcz:BCZK0872 transcriptional regulator; BadM/Rrf2 family transcriptional regulator 1642861 8357494 Cpin_1375 Chitinophaga pinensis DSM 2588 BadM/Rrf2 family transcriptional regulator YP_003121073.1 1642364 R 485918 CDS YP_003121074.1 256420421 8357495 complement(1642894..1644081) 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpt:Bpet3929 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1644081 8357495 Cpin_1376 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003121074.1 1642894 R 485918 CDS YP_003121075.1 256420422 8357496 1644290..1644484 1 NC_013132.1 hypothetical protein 1644484 8357496 Cpin_1377 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121075.1 1644290 D 485918 CDS YP_003121076.1 256420423 8357497 1644520..1645320 1 NC_013132.1 KEGG: lpp:lpp2125 hypothetical protein; hypothetical protein 1645320 8357497 Cpin_1378 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121076.1 1644520 D 485918 CDS YP_003121077.1 256420424 8357498 complement(1645328..1645891) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 1645891 8357498 Cpin_1379 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003121077.1 1645328 R 485918 CDS YP_003121078.1 256420425 8357499 1646009..1646782 1 NC_013132.1 PFAM: ThiJ/PfpI domain protein; KEGG: mmw:Mmwyl1_0683 ThiJ/PfpI domain-containing protein; ThiJ/PfpI domain-containing protein 1646782 8357499 Cpin_1380 Chitinophaga pinensis DSM 2588 ThiJ/PfpI domain-containing protein YP_003121078.1 1646009 D 485918 CDS YP_003121079.1 256420426 8357500 complement(1646816..1647373) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1647373 8357500 Cpin_1381 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121079.1 1646816 R 485918 CDS YP_003121080.1 256420427 8357501 1647484..1648167 1 NC_013132.1 PFAM: fatty acid hydroxylase; KEGG: bba:Bd1729 sterol desaturase family protein; fatty acid hydroxylase 1648167 8357501 Cpin_1382 Chitinophaga pinensis DSM 2588 fatty acid hydroxylase YP_003121080.1 1647484 D 485918 CDS YP_003121081.1 256420428 8357502 complement(1648182..1648484) 1 NC_013132.1 KEGG: pnu:Pnuc_0581 hypothetical protein; hypothetical protein 1648484 8357502 Cpin_1383 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121081.1 1648182 R 485918 CDS YP_003121082.1 256420429 8357503 1648569..1648769 1 NC_013132.1 hypothetical protein 1648769 8357503 Cpin_1384 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121082.1 1648569 D 485918 CDS YP_003121083.1 256420430 8357504 complement(1648861..1649130) 1 NC_013132.1 hypothetical protein 1649130 8357504 Cpin_1385 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121083.1 1648861 R 485918 CDS YP_003121084.1 256420431 8357505 1649454..1649969 1 NC_013132.1 hypothetical protein 1649969 8357505 Cpin_1386 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121084.1 1649454 D 485918 CDS YP_003121085.1 256420432 8357506 1650072..1651439 1 NC_013132.1 KEGG: scl:sce7745 hypothetical protein; hypothetical protein 1651439 8357506 Cpin_1387 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121085.1 1650072 D 485918 CDS YP_003121086.1 256420433 8357507 complement(1651551..1652411) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: aba:Acid345_2253 aldo/keto reductase; aldo/keto reductase 1652411 8357507 Cpin_1388 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003121086.1 1651551 R 485918 CDS YP_003121087.1 256420434 8357508 complement(1652477..1653346) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 1653346 8357508 Cpin_1389 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121087.1 1652477 R 485918 CDS YP_003121088.1 256420435 8357509 1653557..1654183 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 1654183 8357509 Cpin_1390 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003121088.1 1653557 D 485918 CDS YP_003121089.1 256420436 8357510 complement(1654534..1655271) 1 NC_013132.1 KEGG: pzu:PHZ_c1109 hypothetical protein; hypothetical protein 1655271 8357510 Cpin_1391 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121089.1 1654534 R 485918 CDS YP_003121090.1 256420437 8357511 complement(join(1655821..1656672,1656672..1656932)) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase; transposase IS3/IS911 family protein 1656932 8357511 Cpin_1392 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003121090.1 1655821 R 485918 CDS YP_003121091.1 256420438 8357512 1657055..1657180 1 NC_013132.1 hypothetical protein 1657180 8357512 Cpin_1393 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121091.1 1657055 D 485918 CDS YP_003121092.1 256420439 8357513 1657184..1660573 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 1660573 8357513 Cpin_1394 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121092.1 1657184 D 485918 CDS YP_003121093.1 256420440 8357514 1660619..1665010 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 1665010 8357514 Cpin_1395 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121093.1 1660619 D 485918 CDS YP_003121094.1 256420441 8357515 1665015..1665137 1 NC_013132.1 hypothetical protein 1665137 8357515 Cpin_1396 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121094.1 1665015 D 485918 CDS YP_003121095.1 256420442 8357517 1665826..1666842 1 NC_013132.1 KEGG: nma:NMA0246 glyceraldehyde 3-phosphate dehydrogenase C; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 1666842 8357517 Cpin_1397 Chitinophaga pinensis DSM 2588 glyceraldehyde-3-phosphate dehydrogenase YP_003121095.1 1665826 D 485918 CDS YP_003121096.1 256420443 8357518 1666960..1668156 1 NC_013132.1 PFAM: phosphoglycerate kinase; KEGG: hypothetical protein; K00927 phosphoglycerate kinase; phosphoglycerate kinase 1668156 8357518 Cpin_1398 Chitinophaga pinensis DSM 2588 phosphoglycerate kinase YP_003121096.1 1666960 D 485918 CDS YP_003121097.1 256420444 8357519 1668242..1669498 1 NC_013132.1 PFAM: sodium:dicarboxylate symporter; KEGG: bat:BAS3380 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter 1669498 8357519 Cpin_1399 Chitinophaga pinensis DSM 2588 sodium:dicarboxylate symporter YP_003121097.1 1668242 D 485918 CDS YP_003121098.1 256420445 8357520 1669511..1672666 1 NC_013132.1 PFAM: histidine kinase internal region; two component regulator propeller; two component regulator three Y domain protein; KEGG: cja:CJA_2849 two-component system sensor histidine kinase/response regulator, hybrid (one-component system); signal transduction histidine kinase LytS 1672666 8357520 Cpin_1400 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003121098.1 1669511 D 485918 CDS YP_003121099.1 256420446 8357521 complement(1672725..1673519) 1 NC_013132.1 PFAM: protein of unknown function DUF477; KEGG: msu:MS1215 hypothetical protein; hypothetical protein 1673519 8357521 Cpin_1401 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121099.1 1672725 R 485918 CDS YP_003121100.1 256420447 8357522 complement(1673557..1674012) 1 NC_013132.1 PFAM: protein of unknown function DUF477; KEGG: pmu:PM0784 hypothetical protein; hypothetical protein 1674012 8357522 Cpin_1402 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121100.1 1673557 R 485918 CDS YP_003121101.1 256420448 8357523 complement(1674024..1674614) 1 NC_013132.1 PFAM: LemA family protein; KEGG: pmu:PM0785 hypothetical protein; LemA family protein 1674614 8357523 Cpin_1403 Chitinophaga pinensis DSM 2588 LemA family protein YP_003121101.1 1674024 R 485918 CDS YP_003121102.1 256420449 8357524 1675041..1675505 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rfr:Rfer_1982 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); response regulator receiver protein 1675505 8357524 Cpin_1404 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121102.1 1675041 D 485918 CDS YP_003121103.1 256420450 8357525 complement(1675518..1676741) 1 NC_013132.1 PFAM: FecR protein; KEGG: pap:PSPA7_2872 transmembrane sensor; anti-FecI sigma factor FecR 1676741 8357525 Cpin_1405 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121103.1 1675518 R 485918 CDS YP_003121104.1 256420451 8357526 complement(1676798..1677160) 1 NC_013132.1 ECF subfamily RNA polymerase sigma-24 subunit 1677160 8357526 Cpin_1406 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121104.1 1676798 R 485918 CDS YP_003121105.1 256420452 8357527 1677336..1678706 1 NC_013132.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bha:BH3875 hypothetical protein; peptidase M20 1678706 8357527 Cpin_1407 Chitinophaga pinensis DSM 2588 peptidase M20 YP_003121105.1 1677336 D 485918 CDS YP_003121106.1 256420453 8357528 1678754..1679179 1 NC_013132.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: aba:Acid345_3977 RNA-binding S4; RNA-binding S4 domain-containing protein 1679179 8357528 Cpin_1408 Chitinophaga pinensis DSM 2588 RNA-binding S4 domain-containing protein YP_003121106.1 1678754 D 485918 CDS YP_003121107.1 256420454 8357529 1679278..1680498 1 NC_013132.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: hypothetical protein; diaminopimelate decarboxylase 1680498 8357529 Cpin_1409 Chitinophaga pinensis DSM 2588 diaminopimelate decarboxylase YP_003121107.1 1679278 D 485918 CDS YP_003121108.1 256420455 8357530 1680728..1683064 1 NC_013132.1 hypothetical protein 1683064 8357530 Cpin_1410 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121108.1 1680728 D 485918 CDS YP_003121109.1 256420456 8357531 complement(1683203..1686874) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: afw:Anae109_3731 hypothetical protein; metallophosphoesterase 1686874 8357531 Cpin_1411 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003121109.1 1683203 R 485918 CDS YP_003121110.1 256420457 8357532 complement(1686871..1687719) 1 NC_013132.1 hypothetical protein 1687719 8357532 Cpin_1412 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121110.1 1686871 R 485918 CDS YP_003121111.1 256420458 8357533 1687859..1689148 1 NC_013132.1 KEGG: sal:Sala_2169 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1689148 8357533 Cpin_1413 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003121111.1 1687859 D 485918 CDS YP_003121112.1 256420459 8357534 1689172..1691235 1 NC_013132.1 PFAM: polyphosphate kinase; KEGG: asa:ASA_1502 polyphosphate kinase; polyphosphate kinase 1691235 8357534 Cpin_1414 Chitinophaga pinensis DSM 2588 polyphosphate kinase YP_003121112.1 1689172 D 485918 CDS YP_003121113.1 256420460 8357535 1691253..1691765 1 NC_013132.1 KEGG: aha:AHA_2658 hypothetical protein; hypothetical protein 1691765 8357535 Cpin_1415 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121113.1 1691253 D 485918 CDS YP_003121114.1 256420461 8357536 1691773..1692276 1 NC_013132.1 KEGG: ade:Adeh_4019 hypothetical protein; hypothetical protein 1692276 8357536 Cpin_1416 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121114.1 1691773 D 485918 CDS YP_003121115.1 256420462 8357537 1692316..1693719 1 NC_013132.1 PFAM: beta-lactamase domain protein; RNA- metabolising metallo-beta-lactamase; KEGG: pca:Pcar_0642 exonuclease; beta-lactamase domain-containing protein 1693719 8357537 Cpin_1417 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003121115.1 1692316 D 485918 CDS YP_003121116.1 256420463 8357538 complement(1693776..1696313) 1 NC_013132.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: mxa:MXAN_0644 peptidase, M1 (aminopeptidase N) family; peptidase M1 membrane alanine aminopeptidase 1696313 8357538 Cpin_1418 Chitinophaga pinensis DSM 2588 peptidase M1 membrane alanine aminopeptidase YP_003121116.1 1693776 R 485918 CDS YP_003121117.1 256420464 8357539 1696491..1696991 1 NC_013132.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: nis:NIS_1303 Na+-transporting oxaloacetate decarboxylase, alpha subunit; biotin/lipoyl attachment domain-containing protein 1696991 8357539 Cpin_1419 Chitinophaga pinensis DSM 2588 biotin/lipoyl attachment domain-containing protein YP_003121117.1 1696491 D 485918 CDS YP_003121118.1 256420465 8357540 1697072..1698871 1 NC_013132.1 KEGG: Hypothetical protein CBG02561; hypothetical protein 1698871 8357540 Cpin_1420 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121118.1 1697072 D 485918 CDS YP_003121119.1 256420466 8357541 1698972..1699724 1 NC_013132.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1699724 truA 8357541 truA Chitinophaga pinensis DSM 2588 tRNA pseudouridine synthase A YP_003121119.1 1698972 D 485918 CDS YP_003121120.1 256420467 8357563 complement(1732533..1733357) 1 NC_013132.1 hypothetical protein 1733357 8357563 Cpin_1422 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121120.1 1732533 R 485918 CDS YP_003121121.1 256420468 8357564 complement(1733385..1734407) 1 NC_013132.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator 1734407 8357564 Cpin_1423 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003121121.1 1733385 R 485918 CDS YP_003121122.1 256420469 8357565 complement(1734557..1737118) 1 NC_013132.1 KEGG: sus:Acid_7167 hypothetical protein; hypothetical protein 1737118 8357565 Cpin_1424 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121122.1 1734557 R 485918 CDS YP_003121123.1 256420470 8357566 1737690..1737815 1 NC_013132.1 hypothetical protein 1737815 8357566 Cpin_1425 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121123.1 1737690 D 485918 CDS YP_003121124.1 256420471 8357567 1737859..1738719 1 NC_013132.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: hypothetical protein; MotA/TolQ/ExbB proton channel 1738719 8357567 Cpin_1426 Chitinophaga pinensis DSM 2588 MotA/TolQ/ExbB proton channel YP_003121124.1 1737859 D 485918 CDS YP_003121125.1 256420472 8357568 1738790..1739446 1 NC_013132.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: pla:Plav_2891 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1739446 8357568 Cpin_1427 Chitinophaga pinensis DSM 2588 biopolymer transport protein ExbD/TolR YP_003121125.1 1738790 D 485918 CDS YP_003121126.1 256420473 8357569 1739520..1740113 1 NC_013132.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: pat:Patl_4069 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1740113 8357569 Cpin_1428 Chitinophaga pinensis DSM 2588 biopolymer transport protein ExbD/TolR YP_003121126.1 1739520 D 485918 CDS YP_003121127.1 256420474 8357570 1740156..1740995 1 NC_013132.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sus:Acid_1280 TonB family protein; TonB family protein 1740995 8357570 Cpin_1429 Chitinophaga pinensis DSM 2588 TonB family protein YP_003121127.1 1740156 D 485918 CDS YP_003121128.1 256420475 8357571 1741095..1742480 1 NC_013132.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1742480 trmE 8357571 trmE Chitinophaga pinensis DSM 2588 tRNA modification GTPase TrmE YP_003121128.1 1741095 D 485918 CDS YP_003121129.1 256420476 8357572 complement(1742604..1742783) 1 NC_013132.1 hypothetical protein 1742783 8357572 Cpin_1431 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121129.1 1742604 R 485918 CDS YP_003121130.1 256420477 8357573 1742953..1744086 1 NC_013132.1 PFAM: major royal jelly protein; KEGG: gme:Gmet_2448 hypothetical protein; hypothetical protein 1744086 8357573 Cpin_1432 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121130.1 1742953 D 485918 CDS YP_003121131.1 256420478 8357574 1744098..1745174 1 NC_013132.1 PFAM: major royal jelly protein; KEGG: mrd:Mrad2831_4434 hypothetical protein; hypothetical protein 1745174 8357574 Cpin_1433 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121131.1 1744098 D 485918 CDS YP_003121132.1 256420479 8357575 1745349..1747982 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; thioesterase; phosphopantetheine-binding; KEGG: pag:PLES_28971 PvdD(3); amino acid adenylation protein 1747982 8357575 Cpin_1434 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003121132.1 1745349 D 485918 CDS YP_003121133.1 256420480 8357576 1748010..1748897 1 NC_013132.1 PFAM: beta-lactamase; KEGG: aby:ABAYE3623 beta-lactamase VEB-1; beta-lactamase 1748897 8357576 Cpin_1435 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003121133.1 1748010 D 485918 CDS YP_003121134.1 256420481 8357577 complement(1748890..1752006) 1 NC_013132.1 PFAM: lantibiotic dehydratase; KEGG: hypothetical protein; lantibiotic dehydratase 1752006 8357577 Cpin_1436 Chitinophaga pinensis DSM 2588 lantibiotic dehydratase YP_003121134.1 1748890 R 485918 CDS YP_003121135.1 256420482 8357578 1752243..1752401 1 NC_013132.1 hypothetical protein 1752401 8357578 Cpin_1437 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121135.1 1752243 D 485918 CDS YP_003121136.1 256420483 8357579 1752439..1752627 1 NC_013132.1 hypothetical protein 1752627 8357579 Cpin_1438 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121136.1 1752439 D 485918 CDS YP_003121137.1 256420484 8357580 1752701..1753915 1 NC_013132.1 PFAM: lanthionine synthetase C family protein; KEGG: bha:BH0452 lantibiotic mersacidin modifying enzyme; lanthionine synthetase C family protein 1753915 8357580 Cpin_1439 Chitinophaga pinensis DSM 2588 lanthionine synthetase C family protein YP_003121137.1 1752701 D 485918 CDS YP_003121138.1 256420485 8357581 1754011..1754637 1 NC_013132.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bcs:BCAN_A0350 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 1754637 8357581 Cpin_1440 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003121138.1 1754011 D 485918 CDS YP_003121139.1 256420486 8357582 complement(1754638..1755753) 1 NC_013132.1 KEGG: dps:DP2713 hypothetical protein; hypothetical protein 1755753 8357582 Cpin_1441 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121139.1 1754638 R 485918 CDS YP_003121140.1 256420487 8357583 complement(1755836..1756327) 1 NC_013132.1 hypothetical protein 1756327 8357583 Cpin_1442 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121140.1 1755836 R 485918 CDS YP_003121141.1 256420488 8357584 complement(1756311..1757585) 1 NC_013132.1 PFAM: alcohol acetyltransferase; condensation domain protein; KEGG: pau:PA14_21000 hypothetical protein; alcohol acetyltransferase 1757585 8357584 Cpin_1443 Chitinophaga pinensis DSM 2588 alcohol acetyltransferase YP_003121141.1 1756311 R 485918 CDS YP_003121142.1 256420489 8357585 complement(1757593..1758906) 1 NC_013132.1 PFAM: condensation domain protein; alcohol acetyltransferase; KEGG: bam:Bamb_6240 condensation domain-containing protein; condensation domain-containing protein 1758906 8357585 Cpin_1444 Chitinophaga pinensis DSM 2588 condensation domain-containing protein YP_003121142.1 1757593 R 485918 CDS YP_003121143.1 256420490 8357586 complement(1758920..1760119) 1 NC_013132.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: bch:Bcen2424_1765 glycosyl transferase family protein; MGT family glycosyltransferase 1760119 8357586 Cpin_1445 Chitinophaga pinensis DSM 2588 MGT family glycosyltransferase YP_003121143.1 1758920 R 485918 CDS YP_003121144.1 256420491 8357587 complement(1760133..1761332) 1 NC_013132.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: glycosyltransferase 28 domain; UDP- glucuronosyl/UDP-glucosyltransferase; glycosyl transferase family 28; KEGG: bca:BCE_2825 glycosyltransferase; MGT family glycosyltransferase 1761332 8357587 Cpin_1446 Chitinophaga pinensis DSM 2588 MGT family glycosyltransferase YP_003121144.1 1760133 R 485918 CDS YP_003121145.1 256420492 8357588 complement(1761311..1762126) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: ppf:Pput_2891 alpha/beta hydrolase; alpha/beta hydrolase 1762126 8357588 Cpin_1447 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003121145.1 1761311 R 485918 CDS YP_003121146.1 256420493 8357589 complement(1762108..1762416) 1 NC_013132.1 hypothetical protein 1762416 8357589 Cpin_1448 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121146.1 1762108 R 485918 CDS YP_003121147.1 256420494 8357590 complement(1762404..1766645) 1 NC_013132.1 PFAM: beta-ketoacyl synthase; 4'- phosphopantetheinyl transferase; KEGG: sus:Acid_1973 beta-ketoacyl synthase; beta-ketoacyl synthase 1766645 8357590 Cpin_1449 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003121147.1 1762404 R 485918 CDS YP_003121148.1 256420495 8357591 complement(1766673..1773656) 1 NC_013132.1 PFAM: beta-ketoacyl synthase; acyl transferase; KR domain protein; short-chain dehydrogenase/reductase SDR; 2- nitropropane dioxygenase NPD; KEGG: sus:Acid_1972 beta-ketoacyl synthase; erythronolide synthase 1773656 8357591 Cpin_1450 Chitinophaga pinensis DSM 2588 erythronolide synthase YP_003121148.1 1766673 R 485918 CDS YP_003121149.1 256420496 8357592 complement(1774287..1775093) 1 NC_013132.1 KEGG: dac:Daci_4021 hypothetical protein; hypothetical protein 1775093 8357592 Cpin_1451 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121149.1 1774287 R 485918 CDS YP_003121150.1 256420497 8357593 complement(1775443..1776099) 1 NC_013132.1 KEGG: xau:Xaut_0226 hypothetical protein; hypothetical protein 1776099 8357593 Cpin_1452 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121150.1 1775443 R 485918 CDS YP_003121151.1 256420498 8357594 1776791..1778485 1 NC_013132.1 KEGG: gur:Gura_4116 hypothetical protein; hypothetical protein 1778485 8357594 Cpin_1453 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121151.1 1776791 D 485918 CDS YP_003121152.1 256420499 8357595 1778489..1780765 1 NC_013132.1 PFAM: protein of unknown function DUF524; KEGG: swd:Swoo_4917 hypothetical protein; hypothetical protein 1780765 8357595 Cpin_1454 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121152.1 1778489 D 485918 CDS YP_003121153.1 256420500 8357596 1780789..1781685 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: bha:BH1011 oxidoreductase; aldo/keto reductase 1781685 8357596 Cpin_1455 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003121153.1 1780789 D 485918 CDS YP_003121154.1 256420501 8357597 complement(1781692..1783248) 1 NC_013132.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: ilo:IL0916 carboxyl-terminal protease; peptidase S41 1783248 8357597 Cpin_1456 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003121154.1 1781692 R 485918 CDS YP_003121155.1 256420502 8357598 1783570..1785912 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: saz:Sama_0293 alpha-1,2-mannosidase; alpha-1,2-mannosidase 1785912 8357598 Cpin_1457 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003121155.1 1783570 D 485918 CDS YP_003121156.1 256420503 8357599 1786038..1786865 1 NC_013132.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: smt:Smal_0115 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1786865 8357599 Cpin_1458 Chitinophaga pinensis DSM 2588 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_003121156.1 1786038 D 485918 CDS YP_003121157.1 256420504 8357600 1786937..1787653 1 NC_013132.1 hypothetical protein 1787653 8357600 Cpin_1459 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121157.1 1786937 D 485918 CDS YP_003121158.1 256420505 8357601 1788040..1791237 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 1791237 8357601 Cpin_1460 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121158.1 1788040 D 485918 CDS YP_003121159.1 256420506 8357602 1791261..1792691 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1792691 8357602 Cpin_1461 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121159.1 1791261 D 485918 CDS YP_003121160.1 256420507 8357603 complement(1792864..1793649) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bba:Bd0506 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1793649 8357603 Cpin_1462 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003121160.1 1792864 R 485918 CDS YP_003121161.1 256420508 8357604 complement(1793733..1794857) 1 NC_013132.1 KEGG: ccs:CCNA_00575 hypothetical protein; hypothetical protein 1794857 8357604 Cpin_1463 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121161.1 1793733 R 485918 CDS YP_003121162.1 256420509 8357605 1794970..1795992 1 NC_013132.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator 1795992 8357605 Cpin_1464 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003121162.1 1794970 D 485918 CDS YP_003121163.1 256420510 8357606 1796388..1797449 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 1797449 8357606 Cpin_1465 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121163.1 1796388 D 485918 CDS YP_003121164.1 256420511 8357607 1797486..1798652 1 NC_013132.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: aba:Acid345_1701 galactokinase; galactokinase 1798652 8357607 Cpin_1466 Chitinophaga pinensis DSM 2588 galactokinase YP_003121164.1 1797486 D 485918 CDS YP_003121165.1 256420512 8357608 1798717..1799787 1 NC_013132.1 KEGG: aba:Acid345_1703 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase 1799787 8357608 Cpin_1467 Chitinophaga pinensis DSM 2588 galactose-1-phosphate uridylyltransferase YP_003121165.1 1798717 D 485918 CDS YP_003121166.1 256420513 8357609 complement(1800044..1802092) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bpt:Bpet4645 TonB-dependent outer membrane receptor; TonB-dependent receptor 1802092 8357609 Cpin_1468 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003121166.1 1800044 R 485918 CDS YP_003121167.1 256420514 8357610 complement(1802135..1803454) 1 NC_013132.1 PFAM: NHL repeat containing protein; KEGG: psa:PST_1093 L-sorbosone dehydrogenase; NHL repeat containing protein 1803454 8357610 Cpin_1469 Chitinophaga pinensis DSM 2588 NHL repeat containing protein YP_003121167.1 1802135 R 485918 CDS YP_003121168.1 256420515 8357611 1804242..1805081 1 NC_013132.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sus:Acid_1280 TonB family protein; TonB family protein 1805081 8357611 Cpin_1470 Chitinophaga pinensis DSM 2588 TonB family protein YP_003121168.1 1804242 D 485918 CDS YP_003121169.1 256420516 8357612 1805292..1807871 1 NC_013132.1 KEGG: phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 1807871 8357612 Cpin_1471 Chitinophaga pinensis DSM 2588 phosphoenolpyruvate carboxylase YP_003121169.1 1805292 D 485918 CDS YP_003121170.1 256420517 8357613 1808042..1808344 1 NC_013132.1 KEGG: apl:APL_1618 urease subunit gamma; TIGRFAM: urease, gamma subunit; PFAM: urease gamma subunit region; urease subunit gamma 1808344 8357613 Cpin_1472 Chitinophaga pinensis DSM 2588 urease subunit gamma YP_003121170.1 1808042 D 485918 CDS YP_003121171.1 256420518 8357614 1808382..1808762 1 NC_013132.1 KEGG: hac:Hac_1532 bifunctional urease subunit gamma/beta; TIGRFAM: urease, beta subunit; PFAM: urease beta subunit; urease subunit beta 1808762 8357614 Cpin_1473 Chitinophaga pinensis DSM 2588 urease subunit beta YP_003121171.1 1808382 D 485918 CDS YP_003121172.1 256420519 8357615 1808759..1810480 1 NC_013132.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1810480 ureC 8357615 ureC Chitinophaga pinensis DSM 2588 urease subunit alpha YP_003121172.1 1808759 D 485918 CDS YP_003121173.1 256420520 8357616 1810489..1810992 1 NC_013132.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 1810992 ureE 8357616 ureE Chitinophaga pinensis DSM 2588 urease accessory protein UreE YP_003121173.1 1810489 D 485918 CDS YP_003121174.1 256420521 8357617 1810999..1811685 1 NC_013132.1 PFAM: urease accessory protein UreF; KEGG: apa:APP7_1675 urease accessory protein UreF; urease accessory protein UreF 1811685 8357617 Cpin_1476 Chitinophaga pinensis DSM 2588 urease accessory protein UreF YP_003121174.1 1810999 D 485918 CDS YP_003121175.1 256420522 8357618 1811743..1812381 1 NC_013132.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: hiq:CGSHiGG_05935 urease accessory protein; urease accessory protein UreG 1812381 8357618 Cpin_1477 Chitinophaga pinensis DSM 2588 urease accessory protein UreG YP_003121175.1 1811743 D 485918 CDS YP_003121176.1 256420523 8357619 1812378..1813160 1 NC_013132.1 PFAM: urease accessory protein UreD; KEGG: apj:APJL_1644 urease accessory protein UreH; urease accessory protein UreD 1813160 8357619 Cpin_1478 Chitinophaga pinensis DSM 2588 urease accessory protein UreD YP_003121176.1 1812378 D 485918 CDS YP_003121177.1 256420524 8357620 1813173..1813874 1 NC_013132.1 KEGG: ccs:CCNA_00322 hypothetical protein; hypothetical protein 1813874 8357620 Cpin_1479 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121177.1 1813173 D 485918 CDS YP_003121178.1 256420525 8357621 1814054..1815466 1 NC_013132.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bsu:BSU23860 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 1815466 8357621 Cpin_1480 Chitinophaga pinensis DSM 2588 6-phosphogluconate dehydrogenase YP_003121178.1 1814054 D 485918 CDS YP_003121179.1 256420526 8357622 1815519..1817024 1 NC_013132.1 KEGG: ppd:Ppro_2250 glucose-6-phosphate 1- dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1817024 8357622 Cpin_1481 Chitinophaga pinensis DSM 2588 glucose-6-phosphate 1-dehydrogenase YP_003121179.1 1815519 D 485918 CDS YP_003121180.1 256420527 8357623 1817030..1817755 1 NC_013132.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: gme:Gmet_2618 6-phosphogluconolactonase; 6-phosphogluconolactonase 1817755 8357623 Cpin_1482 Chitinophaga pinensis DSM 2588 6-phosphogluconolactonase YP_003121180.1 1817030 D 485918 CDS YP_003121181.1 256420528 8357624 1817990..1819438 1 NC_013132.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: sus:Acid_7109 alpha-L-fucosidase; alpha-L-fucosidase 1819438 8357624 Cpin_1483 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003121181.1 1817990 D 485918 CDS YP_003121182.1 256420529 8357625 complement(1819440..1822253) 1 NC_013132.1 KEGG: gsu:GSU3219 fibronectin type III domain- containing protein; hypothetical protein 1822253 8357625 Cpin_1484 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121182.1 1819440 R 485918 CDS YP_003121183.1 256420530 8357626 complement(1822508..1824067) 1 NC_013132.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: pat:Patl_1434 ferredoxin-dependent glutamate synthase; glutamate synthase 1824067 8357626 Cpin_1485 Chitinophaga pinensis DSM 2588 glutamate synthase YP_003121183.1 1822508 R 485918 CDS YP_003121184.1 256420531 8357627 complement(1824107..1824925) 1 NC_013132.1 PFAM: mechanosensitive ion channel MscS; KEGG: amc:MADE_01752 mechanosensitive channel protein (MscS family); mechanosensitive ion channel protein MscS 1824925 8357627 Cpin_1486 Chitinophaga pinensis DSM 2588 mechanosensitive ion channel protein MscS YP_003121184.1 1824107 R 485918 CDS YP_003121185.1 256420532 8357628 1825077..1827677 1 NC_013132.1 PFAM: glycoside hydrolase, family 20, catalytic core; glycoside hydrolase family 20 domain protein; beta-N- acetylhexosaminidase-like; KEGG: hch:HCH_04791 N-acetyl-beta-hexosaminidase; beta-N-acetylhexosaminidase 1827677 8357628 Cpin_1487 Chitinophaga pinensis DSM 2588 beta-N-acetylhexosaminidase YP_003121185.1 1825077 D 485918 CDS YP_003121186.1 256420533 8357629 1828025..1828465 1 NC_013132.1 PFAM: UspA domain protein; KEGG: dvm:DvMF_0804 UspA domain protein; UspA domain-containing protein 1828465 8357629 Cpin_1488 Chitinophaga pinensis DSM 2588 UspA domain-containing protein YP_003121186.1 1828025 D 485918 CDS YP_003121187.1 256420534 8357630 1828576..1831161 1 NC_013132.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: bat:BAS1375 virulence factor MprF; hypothetical protein 1831161 8357630 Cpin_1489 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121187.1 1828576 D 485918 CDS YP_003121188.1 256420535 8357631 1831174..1831878 1 NC_013132.1 PFAM: virulence factor family protein; KEGG: pae:PA0919 hypothetical protein; virulence factor family protein 1831878 8357631 Cpin_1490 Chitinophaga pinensis DSM 2588 virulence factor family protein YP_003121188.1 1831174 D 485918 CDS YP_003121189.1 256420536 8357632 1832681..1832971 1 NC_013132.1 KEGG: gur:Gura_3403 transcriptional regulator-like protein; hypothetical protein 1832971 8357632 Cpin_1491 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121189.1 1832681 D 485918 CDS YP_003121190.1 256420537 8357633 1833273..1833608 1 NC_013132.1 response regulator receiver protein 1833608 8357633 Cpin_1492 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121190.1 1833273 D 485918 CDS YP_003121191.1 256420538 8357634 1834554..1835150 1 NC_013132.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: aba:Acid345_4290 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1835150 8357634 Cpin_1493 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003121191.1 1834554 D 485918 CDS YP_003121192.1 256420539 8357635 1835420..1838515 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 1838515 8357635 Cpin_1494 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121192.1 1835420 D 485918 CDS YP_003121193.1 256420540 8357636 1838528..1840048 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 1840048 8357636 Cpin_1495 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121193.1 1838528 D 485918 CDS YP_003121194.1 256420541 8357637 complement(1840212..1840835) 1 NC_013132.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; KEGG: yen:YE2476 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein 1840835 8357637 Cpin_1496 Chitinophaga pinensis DSM 2588 FAD-binding 9 siderophore-interacting domain-containing protein YP_003121194.1 1840212 R 485918 CDS YP_003121195.1 256420542 8357638 complement(1840911..1841768) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hap:HAPS_1638 transcriptional regulator, AraC family; AraC family transcriptional regulator 1841768 8357638 Cpin_1497 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121195.1 1840911 R 485918 CDS YP_003121196.1 256420543 8357639 1841910..1842146 1 NC_013132.1 hypothetical protein 1842146 8357639 Cpin_1498 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121196.1 1841910 D 485918 CDS YP_003121197.1 256420544 8357640 complement(1842143..1843117) 1 NC_013132.1 KEGG: hypothetical protein; K09527 DnaJ homolog, subfamily C, member 7; hypothetical protein 1843117 8357640 Cpin_1499 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121197.1 1842143 R 485918 CDS YP_003121198.1 256420545 8357641 complement(1843432..1843905) 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bbr:BB2692 hypothetical protein; MarR family transcriptional regulator 1843905 8357641 Cpin_1500 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003121198.1 1843432 R 485918 CDS YP_003121199.1 256420546 8357642 complement(1844023..1845204) 1 NC_013132.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1845204 8357642 Cpin_1501 Chitinophaga pinensis DSM 2588 mannonate dehydratase YP_003121199.1 1844023 R 485918 CDS YP_003121200.1 256420547 8357643 complement(1845410..1846750) 1 NC_013132.1 PFAM: MOFRL domain protein; KEGG: dal:Dalk_0946 hydroxypyruvate reductase; hydroxypyruvate reductase 1846750 8357643 Cpin_1502 Chitinophaga pinensis DSM 2588 hydroxypyruvate reductase YP_003121200.1 1845410 R 485918 CDS YP_003121201.1 256420548 8357644 complement(1846782..1847198) 1 NC_013132.1 KEGG: aba:Acid345_0010 hypothetical protein; hypothetical protein 1847198 8357644 Cpin_1503 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121201.1 1846782 R 485918 CDS YP_003121202.1 256420549 8357645 1847411..1850428 1 NC_013132.1 PFAM: amidohydrolase; amidohydrolase; KEGG: ilo:IL1717 amidohydrolase-like domain- containing protein; amidohydrolase 1850428 8357645 Cpin_1504 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003121202.1 1847411 D 485918 CDS YP_003121203.1 256420550 8357646 1850454..1851746 1 NC_013132.1 KEGG: ilo:IL1716 amidohydrolase; amidohydrolase 1851746 8357646 Cpin_1505 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003121203.1 1850454 D 485918 CDS YP_003121204.1 256420551 8357647 1851855..1852358 1 NC_013132.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: mxa:MXAN_0453 general stress protein 26; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1852358 8357647 Cpin_1506 Chitinophaga pinensis DSM 2588 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_003121204.1 1851855 D 485918 CDS YP_003121205.1 256420552 8357648 complement(1852428..1853711) 1 NC_013132.1 KEGG: acp:A2cp1_1171 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tyrosyl-tRNA synthetase 1853711 8357648 Cpin_1507 Chitinophaga pinensis DSM 2588 tyrosyl-tRNA synthetase YP_003121205.1 1852428 R 485918 CDS YP_003121206.1 256420553 8357649 1853842..1854537 1 NC_013132.1 hypothetical protein 1854537 8357649 Cpin_1508 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121206.1 1853842 D 485918 CDS YP_003121207.1 256420554 8357650 complement(1854713..1855576) 1 NC_013132.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; NAD- dependent epimerase/dehydratase; KEGG: fph:Fphi_1252 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1855576 8357650 Cpin_1509 Chitinophaga pinensis DSM 2588 dTDP-4-dehydrorhamnose reductase YP_003121207.1 1854713 R 485918 CDS YP_003121208.1 256420555 8357651 complement(1855576..1856142) 1 NC_013132.1 KEGG: eci:UTI89_C2309 dTDP-4-dehydrorhamnose 3,5- epimerase (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP- L-rhamnose synthetase); TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1856142 8357651 Cpin_1510 Chitinophaga pinensis DSM 2588 dTDP-4-dehydrorhamnose 3,5-epimerase YP_003121208.1 1855576 R 485918 CDS YP_003121209.1 256420556 8357652 complement(1856151..1857206) 1 NC_013132.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1857206 8357652 Cpin_1511 Chitinophaga pinensis DSM 2588 dTDP-glucose 4,6-dehydratase YP_003121209.1 1856151 R 485918 CDS YP_003121210.1 256420557 8357653 complement(1857287..1858237) 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: sus:Acid_1371 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1858237 8357653 Cpin_1512 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003121210.1 1857287 R 485918 CDS YP_003121211.1 256420558 8357654 complement(1858256..1859569) 1 NC_013132.1 KEGG: mxa:MXAN_1048 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 1859569 8357654 Cpin_1513 Chitinophaga pinensis DSM 2588 nucleotide sugar dehydrogenase YP_003121211.1 1858256 R 485918 CDS YP_003121212.1 256420559 8357655 complement(1859566..1860705) 1 NC_013132.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: msu:MS1498 WecE protein; DegT/DnrJ/EryC1/StrS aminotransferase 1860705 8357655 Cpin_1514 Chitinophaga pinensis DSM 2588 DegT/DnrJ/EryC1/StrS aminotransferase YP_003121212.1 1859566 R 485918 CDS YP_003121213.1 256420560 8357656 1860812..1862077 1 NC_013132.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mxa:MXAN_4714 3-deoxy-D-manno-octulosonic- acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 1862077 8357656 Cpin_1515 Chitinophaga pinensis DSM 2588 3-deoxy-D-manno-octulosonic-acid transferase YP_003121213.1 1860812 D 485918 CDS YP_003121214.1 256420561 8357657 complement(1862047..1862964) 1 NC_013132.1 KEGG: atc:AGR_C_2517 hypothetical protein; hypothetical protein 1862964 8357657 Cpin_1516 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121214.1 1862047 R 485918 CDS YP_003121215.1 256420562 8357658 1863054..1863626 1 NC_013132.1 PFAM: thymidine kinase; KEGG: hypothetical protein; thymidine kinase 1863626 8357658 Cpin_1517 Chitinophaga pinensis DSM 2588 thymidine kinase YP_003121215.1 1863054 D 485918 CDS YP_003121216.1 256420563 8357659 complement(1863833..1864699) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl01_5342 AraC family transcriptional regulator; AraC family transcriptional regulator 1864699 8357659 Cpin_1518 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121216.1 1863833 R 485918 CDS YP_003121217.1 256420564 8357660 1864786..1865895 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pol:Bpro_5550 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1865895 8357660 Cpin_1519 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003121217.1 1864786 D 485918 CDS YP_003121218.1 256420565 8357661 complement(1865946..1866425) 1 NC_013132.1 KEGG: pne:Pnec_0338 GtrA family protein; hypothetical protein 1866425 8357661 Cpin_1520 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121218.1 1865946 R 485918 CDS YP_003121219.1 256420566 8357662 complement(1866485..1867969) 1 NC_013132.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase; carbamoyl-phosphate synthetase large chain domain protein; KEGG: mxa:MXAN_1111 propionyl-CoA carboxylase, alpha subunit; acetyl-CoA carboxylase, biotin carboxylase 1867969 8357662 Cpin_1521 Chitinophaga pinensis DSM 2588 acetyl-CoA carboxylase, biotin carboxylase YP_003121219.1 1866485 R 485918 CDS YP_003121220.1 256420567 8357663 1868009..1868674 1 NC_013132.1 PFAM: cytochrome C biogenesis protein CcmB; ABC-2 type transporter; KEGG: mxa:MXAN_3257 heme exporter protein CcmB; cytochrome C biogenesis protein CcmB 1868674 8357663 Cpin_1522 Chitinophaga pinensis DSM 2588 cytochrome C biogenesis protein CcmB YP_003121220.1 1868009 D 485918 CDS YP_003121221.1 256420568 8357664 1868766..1869428 1 NC_013132.1 PFAM: cytochrome C assembly protein; KEGG: mxa:MXAN_3256 heme exporter protein CcmC; cytochrome C assembly protein 1869428 8357664 Cpin_1523 Chitinophaga pinensis DSM 2588 cytochrome C assembly protein YP_003121221.1 1868766 D 485918 CDS YP_003121222.1 256420569 8357665 1869425..1869679 1 NC_013132.1 hypothetical protein 1869679 8357665 Cpin_1524 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121222.1 1869425 D 485918 CDS YP_003121223.1 256420570 8357666 1869717..1871135 1 NC_013132.1 PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: NAD-dependent glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+); Glu/Leu/Phe/Val dehydrogenase 1871135 8357666 Cpin_1525 Chitinophaga pinensis DSM 2588 Glu/Leu/Phe/Val dehydrogenase YP_003121223.1 1869717 D 485918 CDS YP_003121224.1 256420571 8357667 complement(1871347..1871790) 1 NC_013132.1 KEGG: bca:BCE_0838 hypothetical protein; hypothetical protein 1871790 8357667 Cpin_1526 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121224.1 1871347 R 485918 CDS YP_003121225.1 256420572 8357668 1872020..1872790 1 NC_013132.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 1872790 8357668 Cpin_1527 Chitinophaga pinensis DSM 2588 AMP nucleosidase YP_003121225.1 1872020 D 485918 CDS YP_003121226.1 256420573 8357669 1872809..1874560 1 NC_013132.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bba:Bd1221 ABC-type dipeptide transport system, ATPase component; ABC transporter 1874560 8357669 Cpin_1528 Chitinophaga pinensis DSM 2588 ABC transporter YP_003121226.1 1872809 D 485918 CDS YP_003121227.1 256420574 8357670 1874652..1875701 1 NC_013132.1 TIGRFAM:S-adenosylmethionine/tRNA- ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; KEGG: bcb:BCB4264_A4537 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 1875701 8357670 Cpin_1529 Chitinophaga pinensis DSM 2588 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_003121227.1 1874652 D 485918 CDS YP_003121228.1 256420575 8357671 1875774..1876454 1 NC_013132.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1876454 ispD 8357671 ispD Chitinophaga pinensis DSM 2588 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_003121228.1 1875774 D 485918 CDS YP_003121229.1 256420576 8357672 complement(1876465..1877445) 1 NC_013132.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: dol:Dole_2838 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 1877445 8357672 Cpin_1531 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003121229.1 1876465 R 485918 CDS YP_003121230.1 256420577 8357673 complement(1877508..1878221) 1 NC_013132.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: glo:Glov_0523 DNA repair protein RadC; DNA repair protein RadC 1878221 8357673 Cpin_1532 Chitinophaga pinensis DSM 2588 DNA repair protein RadC YP_003121230.1 1877508 R 485918 CDS YP_003121231.1 256420578 8357674 1878460..1879407 1 NC_013132.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1879407 8357674 Cpin_1533 Chitinophaga pinensis DSM 2588 ribose-phosphate pyrophosphokinase YP_003121231.1 1878460 D 485918 CDS YP_003121232.1 256420579 8357675 1879447..1880028 1 NC_013132.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: acp:A2cp1_0138 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 1880028 8357675 Cpin_1534 Chitinophaga pinensis DSM 2588 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 YP_003121232.1 1879447 D 485918 CDS YP_003121233.1 256420580 8357676 1880172..1880753 1 NC_013132.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1880753 8357676 Cpin_1535 Chitinophaga pinensis DSM 2588 peptidyl-tRNA hydrolase YP_003121233.1 1880172 D 485918 CDS YP_003121234.1 256420581 8357677 1880811..1881422 1 NC_013132.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: glo:Glov_3591 5-oxopent-3-ene-1,2,5- tricarboxylate decarboxylase; fumarylacetoacetate (FAA) hydrolase 1881422 8357677 Cpin_1536 Chitinophaga pinensis DSM 2588 fumarylacetoacetate (FAA) hydrolase YP_003121234.1 1880811 D 485918 CDS YP_003121235.1 256420582 8357678 complement(1881670..1882104) 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcz:pE33L466_0360 MarR family transcriptional regulator; MarR family transcriptional regulator 1882104 8357678 Cpin_1537 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003121235.1 1881670 R 485918 CDS YP_003121236.1 256420583 8357679 1882259..1884304 1 NC_013132.1 PFAM: transketolase central region; transketolase domain protein; dehydrogenase E1 component; KEGG: sus:Acid_3687 dehydrogenase, E1 component; transketolase 1884304 8357679 Cpin_1538 Chitinophaga pinensis DSM 2588 transketolase YP_003121236.1 1882259 D 485918 CDS YP_003121237.1 256420584 8357681 complement(1884530..1884868) 1 NC_013132.1 KEGG: smt:Smal_3824 hypothetical protein; hypothetical protein 1884868 8357681 Cpin_1539 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121237.1 1884530 R 485918 CDS YP_003121238.1 256420585 8357682 complement(1884893..1885267) 1 NC_013132.1 KEGG: smt:Smal_3824 hypothetical protein; hypothetical protein 1885267 8357682 Cpin_1540 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121238.1 1884893 R 485918 CDS YP_003121239.1 256420586 8357683 1885524..1885874 1 NC_013132.1 hypothetical protein 1885874 8357683 Cpin_1541 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121239.1 1885524 D 485918 CDS YP_003121240.1 256420587 8357684 1886011..1886961 1 NC_013132.1 hypothetical protein 1886961 8357684 Cpin_1542 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121240.1 1886011 D 485918 CDS YP_003121241.1 256420588 8357685 1886985..1888214 1 NC_013132.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sit:TM1040_3368 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway)-like; fumarylacetoacetate (FAA) hydrolase 1888214 8357685 Cpin_1543 Chitinophaga pinensis DSM 2588 fumarylacetoacetate (FAA) hydrolase YP_003121241.1 1886985 D 485918 CDS YP_003121242.1 256420589 8357686 1888383..1888967 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein; Crp/Fnr family transcriptional regulator 1888967 8357686 Cpin_1544 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003121242.1 1888383 D 485918 CDS YP_003121243.1 256420590 8357687 complement(1888974..1890131) 1 NC_013132.1 KEGG: bcb:BCB4264_A0932 pyruvyl-transferase; hypothetical protein 1890131 8357687 Cpin_1545 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121243.1 1888974 R 485918 CDS YP_003121244.1 256420591 8357688 1890359..1890847 1 NC_013132.1 KEGG: bra:BRADO3469 hypothetical protein; dual specificity protein phosphatase 1890847 8357688 Cpin_1546 Chitinophaga pinensis DSM 2588 dual specificity protein phosphatase YP_003121244.1 1890359 D 485918 CDS YP_003121245.1 256420592 8357689 complement(1890841..1891647) 1 NC_013132.1 KEGG: scl:sce5390 hypothetical protein; hypothetical protein 1891647 8357689 Cpin_1547 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121245.1 1890841 R 485918 CDS YP_003121246.1 256420593 8357691 complement(1891862..1892248) 1 NC_013132.1 KEGG: cco:CCC13826_1005 hypothetical protein; hypothetical protein 1892248 8357691 Cpin_1549 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121246.1 1891862 R 485918 CDS YP_003121247.1 256420594 8357692 complement(1892284..1893027) 1 NC_013132.1 KEGG: sdn:Sden_1211 hypothetical protein; hypothetical protein 1893027 8357692 Cpin_1550 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121247.1 1892284 R 485918 CDS YP_003121248.1 256420595 8357693 complement(1893162..1894673) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 1894673 8357693 Cpin_1551 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121248.1 1893162 R 485918 CDS YP_003121249.1 256420596 8357694 complement(1894702..1897788) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 1897788 8357694 Cpin_1552 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121249.1 1894702 R 485918 CDS YP_003121250.1 256420597 8357695 1898159..1899364 1 NC_013132.1 hypothetical protein 1899364 8357695 Cpin_1553 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121250.1 1898159 D 485918 CDS YP_003121251.1 256420598 8357696 1899397..1899675 1 NC_013132.1 hypothetical protein 1899675 8357696 Cpin_1554 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121251.1 1899397 D 485918 CDS YP_003121252.1 256420599 8357697 complement(1899893..1900405) 1 NC_013132.1 KEGG: ppg:PputGB1_4079 hypothetical protein; hypothetical protein 1900405 8357697 Cpin_1555 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121252.1 1899893 R 485918 CDS YP_003121253.1 256420600 8357698 complement(1900412..1901080) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: lpf:lpl2571 transmission activator LetA; LuxR family transcriptional regulator 1901080 8357698 Cpin_1556 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003121253.1 1900412 R 485918 CDS YP_003121254.1 256420601 8357699 complement(1901077..1901898) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ank:AnaeK_1880 integral membrane sensor signal transduction histidine kinase; signal transduction histidine kinase 1901898 8357699 Cpin_1557 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003121254.1 1901077 R 485918 CDS YP_003121255.1 256420602 8357700 complement(1901868..1902551) 1 NC_013132.1 hypothetical protein 1902551 8357700 Cpin_1558 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121255.1 1901868 R 485918 CDS YP_003121256.1 256420603 8357701 complement(1902571..1903041) 1 NC_013132.1 hypothetical protein 1903041 8357701 Cpin_1559 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121256.1 1902571 R 485918 CDS YP_003121257.1 256420604 8357702 1903299..1904249 1 NC_013132.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bcr:BCAH187_E0055 peptidase C14 caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 1904249 8357702 Cpin_1560 Chitinophaga pinensis DSM 2588 peptidase C14 caspase catalytic subunit p20 YP_003121257.1 1903299 D 485918 CDS YP_003121258.1 256420605 8357703 1904277..1905362 1 NC_013132.1 PFAM: protein of unknown function DUF323; KEGG: hch:HCH_03025 hypothetical protein; hypothetical protein 1905362 8357703 Cpin_1561 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121258.1 1904277 D 485918 CDS YP_003121259.1 256420606 8357704 1905374..1905715 1 NC_013132.1 PFAM: protein of unknown function DUF1508; KEGG: maq:Maqu_0417 hypothetical protein; hypothetical protein 1905715 8357704 Cpin_1562 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121259.1 1905374 D 485918 CDS YP_003121260.1 256420607 8357705 1905821..1905967 1 NC_013132.1 hypothetical protein 1905967 8357705 Cpin_1563 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121260.1 1905821 D 485918 CDS YP_003121261.1 256420608 8357706 complement(1905971..1906384) 1 NC_013132.1 KEGG: scl:sce4731 hypothetical protein; hypothetical protein 1906384 8357706 Cpin_1564 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121261.1 1905971 R 485918 CDS YP_003121262.1 256420609 8357707 1906489..1907700 1 NC_013132.1 KEGG: spe:Spro_0109 hypothetical protein; hypothetical protein 1907700 8357707 Cpin_1565 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121262.1 1906489 D 485918 CDS YP_003121263.1 256420610 8357708 complement(1907697..1908380) 1 NC_013132.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: VIT1; VIT1 (VACUOLAR IRON TRANSPORTER 1); iron ion transmembrane transporter; hypothetical protein 1908380 8357708 Cpin_1566 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121263.1 1907697 R 485918 CDS YP_003121264.1 256420611 8357709 complement(1908403..1909476) 1 NC_013132.1 KEGG: mxa:MXAN_1191 hypothetical protein; hypothetical protein 1909476 8357709 Cpin_1567 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121264.1 1908403 R 485918 CDS YP_003121265.1 256420612 8357710 complement(1909473..1911083) 1 NC_013132.1 KEGG: dar:Daro_3715 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 1911083 8357710 Cpin_1568 Chitinophaga pinensis DSM 2588 twin-arginine translocation pathway signal YP_003121265.1 1909473 R 485918 CDS YP_003121266.1 256420613 8357711 complement(1911087..1912613) 1 NC_013132.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 1912613 8357711 Cpin_1569 Chitinophaga pinensis DSM 2588 spermidine synthase YP_003121266.1 1911087 R 485918 CDS YP_003121267.1 256420614 8357712 complement(1912626..1912829) 1 NC_013132.1 PFAM: protein of unknown function DUF350; KEGG: aba:Acid345_0110 protein of unknown function DUF350; hypothetical protein 1912829 8357712 Cpin_1570 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121267.1 1912626 R 485918 CDS YP_003121268.1 256420615 8357713 complement(1912848..1913033) 1 NC_013132.1 hypothetical protein 1913033 8357713 Cpin_1571 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121268.1 1912848 R 485918 CDS YP_003121269.1 256420616 8357714 complement(1913020..1914924) 1 NC_013132.1 KEGG: dar:Daro_3751 hypothetical protein; hypothetical protein 1914924 8357714 Cpin_1572 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121269.1 1913020 R 485918 CDS YP_003121270.1 256420617 8357715 complement(1914929..1915282) 1 NC_013132.1 PFAM: S-adenosylmethionine decarboxylase; KEGG: net:Neut_2465 S-adenosylmethionine decarboxylase-related protein; S-adenosylmethionine decarboxylase 1915282 8357715 Cpin_1573 Chitinophaga pinensis DSM 2588 S-adenosylmethionine decarboxylase YP_003121270.1 1914929 R 485918 CDS YP_003121271.1 256420618 8357716 1915402..1915827 1 NC_013132.1 PFAM: YiaAB two helix domain protein; KEGG: bur:Bcep18194_A3880 YiaAB two helix membrane protein; YiaAB two helix domain-containing protein 1915827 8357716 Cpin_1574 Chitinophaga pinensis DSM 2588 YiaAB two helix domain-containing protein YP_003121271.1 1915402 D 485918 CDS YP_003121272.1 256420619 8357717 1915911..1916243 1 NC_013132.1 KEGG: cps:CPS_2775 hypothetical protein; hypothetical protein 1916243 8357717 Cpin_1575 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121272.1 1915911 D 485918 CDS YP_003121273.1 256420620 8357718 complement(1916366..1917427) 1 NC_013132.1 PFAM: peptidase T2 asparaginase 2; KEGG: ecm:EcSMS35_1111 asparaginase family protein; peptidase T2 asparaginase 2 1917427 8357718 Cpin_1576 Chitinophaga pinensis DSM 2588 peptidase T2 asparaginase 2 YP_003121273.1 1916366 R 485918 CDS YP_003121274.1 256420621 8357719 1917561..1919723 1 NC_013132.1 KEGG: sus:Acid_0267 hypothetical protein; hypothetical protein 1919723 8357719 Cpin_1577 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121274.1 1917561 D 485918 CDS YP_003121275.1 256420622 8357720 1919767..1920906 1 NC_013132.1 PFAM: glycosyl hydrolase family 88; KEGG: aba:Acid345_0962 glycosyl hydrolase, family 88; glycoside hydrolase 1920906 8357720 Cpin_1578 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121275.1 1919767 D 485918 CDS YP_003121276.1 256420623 8357721 1921318..1922475 1 NC_013132.1 PFAM: propeptide PepSY amd peptidase M4; PepSY- associated TM helix domain protein; KEGG: pfl:PFL_0863 iron-uptake factor; propeptide PepSY amd peptidase M4 1922475 8357721 Cpin_1579 Chitinophaga pinensis DSM 2588 propeptide PepSY amd peptidase M4 YP_003121276.1 1921318 D 485918 CDS YP_003121277.1 256420624 8357722 1922692..1925145 1 NC_013132.1 PFAM: Domain of unknown function DUF1793; KEGG: sus:Acid_2314 glutaminase; L-glutaminase 1925145 8357722 Cpin_1580 Chitinophaga pinensis DSM 2588 L-glutaminase YP_003121277.1 1922692 D 485918 CDS YP_003121278.1 256420625 8357723 complement(1925344..1925457) 1 NC_013132.1 hypothetical protein 1925457 8357723 Cpin_1581 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121278.1 1925344 R 485918 CDS YP_003121279.1 256420626 8357724 complement(1926109..1926348) 1 NC_013132.1 hypothetical protein 1926348 8357724 Cpin_1582 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121279.1 1926109 R 485918 CDS YP_003121280.1 256420627 8357725 1926510..1927970 1 NC_013132.1 PFAM: protein of unknown function DUF303 acetylesterase KEGG: sus:Acid_3201 sialate O-acetylesterase; sialate O-acetylesterase 1927970 8357725 Cpin_1583 Chitinophaga pinensis DSM 2588 sialate O-acetylesterase YP_003121280.1 1926510 D 485918 CDS YP_003121281.1 256420628 8357726 1928053..1928991 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: azc:AZC_4597 integral membrane protein precursor; hypothetical protein 1928991 8357726 Cpin_1584 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121281.1 1928053 D 485918 CDS YP_003121282.1 256420629 8357727 complement(1929049..1929468) 1 NC_013132.1 hypothetical protein 1929468 8357727 Cpin_1585 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121282.1 1929049 R 485918 CDS YP_003121283.1 256420630 8357728 complement(1929579..1929821) 1 NC_013132.1 hypothetical protein 1929821 8357728 Cpin_1586 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121283.1 1929579 R 485918 CDS YP_003121284.1 256420631 8357729 1930322..1930921 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: eba:ebA4517 RNA polymerase sigma factor (sigma24); ECF subfamily RNA polymerase sigma-24 subunit 1930921 8357729 Cpin_1587 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121284.1 1930322 D 485918 CDS YP_003121285.1 256420632 8357730 1930963..1931976 1 NC_013132.1 PFAM: FecR protein; KEGG: sde:Sde_1443 transcriptional regulator; anti-FecI sigma factor FecR 1931976 8357730 Cpin_1588 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121285.1 1930963 D 485918 CDS YP_003121286.1 256420633 8357731 1932031..1935525 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 1935525 8357731 Cpin_1589 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121286.1 1932031 D 485918 CDS YP_003121287.1 256420634 8357732 1935551..1937173 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 1937173 8357732 Cpin_1590 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121287.1 1935551 D 485918 CDS YP_003121288.1 256420635 8357733 1937224..1938369 1 NC_013132.1 hypothetical protein 1938369 8357733 Cpin_1591 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121288.1 1937224 D 485918 CDS YP_003121289.1 256420636 8357734 1938413..1939555 1 NC_013132.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein; glycoside hydrolase 1939555 8357734 Cpin_1592 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121289.1 1938413 D 485918 CDS YP_003121290.1 256420637 8357735 1939774..1940061 1 NC_013132.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: rpe:RPE_0442 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 1940061 8357735 Cpin_1593 Chitinophaga pinensis DSM 2588 excinuclease ABC subunit C YP_003121290.1 1939774 D 485918 CDS YP_003121291.1 256420638 8357736 complement(1940341..1940502) 1 NC_013132.1 hypothetical protein 1940502 8357736 Cpin_1594 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121291.1 1940341 R 485918 CDS YP_003121292.1 256420639 8357737 complement(1940548..1941762) 1 NC_013132.1 KEGG: sfr:Sfri_1232 hypothetical protein; hypothetical protein 1941762 8357737 Cpin_1595 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121292.1 1940548 R 485918 CDS YP_003121293.1 256420640 8357738 complement(1941769..1942005) 1 NC_013132.1 KEGG: saz:Sama_1681 lipoprotein; hypothetical protein 1942005 8357738 Cpin_1596 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121293.1 1941769 R 485918 CDS YP_003121294.1 256420641 8357739 complement(1941992..1942918) 1 NC_013132.1 PFAM: ApbE family lipoprotein; KEGG: tgr:Tgr7_0552 ApbE family lipoprotein; ApbE family lipoprotein 1942918 8357739 Cpin_1597 Chitinophaga pinensis DSM 2588 ApbE family lipoprotein YP_003121294.1 1941992 R 485918 CDS YP_003121295.1 256420642 8357740 complement(1942925..1943353) 1 NC_013132.1 KEGG: rpb:RPB_4360 thiol:disulfide interchange protein; hypothetical protein 1943353 8357740 Cpin_1598 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121295.1 1942925 R 485918 CDS YP_003121296.1 256420643 8357741 complement(1943460..1946048) 1 NC_013132.1 PFAM: mechanosensitive ion channel MscS; KEGG: aba:Acid345_0914 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 1946048 8357741 Cpin_1599 Chitinophaga pinensis DSM 2588 mechanosensitive ion channel protein MscS YP_003121296.1 1943460 R 485918 CDS YP_003121297.1 256420644 8357742 complement(1946174..1946752) 1 NC_013132.1 PFAM: nitroreductase; KEGG: hypothetical protein; nitroreductase 1946752 8357742 Cpin_1600 Chitinophaga pinensis DSM 2588 nitroreductase YP_003121297.1 1946174 R 485918 CDS YP_003121298.1 256420645 8357743 complement(1946769..1947197) 1 NC_013132.1 KEGG: aeh:Mlg_1456 esterase; esterase 1947197 8357743 Cpin_1601 Chitinophaga pinensis DSM 2588 esterase YP_003121298.1 1946769 R 485918 CDS YP_003121299.1 256420646 8357744 complement(1947254..1947850) 1 NC_013132.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: dps:DP0707 hypothetical protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1947850 8357744 Cpin_1602 Chitinophaga pinensis DSM 2588 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_003121299.1 1947254 R 485918 CDS YP_003121300.1 256420647 8357745 complement(1947885..1948382) 1 NC_013132.1 hypothetical protein 1948382 8357745 Cpin_1603 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121300.1 1947885 R 485918 CDS YP_003121301.1 256420648 8357746 1948577..1949683 1 NC_013132.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: glo:Glov_2638 branched-chain amino acid aminotransferase; branched-chain amino acid aminotransferase 1949683 8357746 Cpin_1604 Chitinophaga pinensis DSM 2588 branched-chain amino acid aminotransferase YP_003121301.1 1948577 D 485918 CDS YP_003121302.1 256420649 8357747 1950119..1950409 1 NC_013132.1 KEGG: nha:Nham_2274 hypothetical protein; hypothetical protein 1950409 8357747 Cpin_1605 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121302.1 1950119 D 485918 CDS YP_003121303.1 256420650 8357748 1950539..1950919 1 NC_013132.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: bch:Bcen2424_0343 30S ribosomal protein S12; 30S ribosomal protein S12 1950919 8357748 Cpin_1606 Chitinophaga pinensis DSM 2588 30S ribosomal protein S12 YP_003121303.1 1950539 D 485918 CDS YP_003121304.1 256420651 8357749 1950953..1951420 1 NC_013132.1 TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: afw:Anae109_1908 30S ribosomal protein S7; 30S ribosomal protein S7 1951420 8357749 Cpin_1607 Chitinophaga pinensis DSM 2588 30S ribosomal protein S7 YP_003121304.1 1950953 D 485918 CDS YP_003121305.1 256420652 8357750 complement(1952084..1955389) 1 NC_013132.1 PFAM: Collagen triple helix repeat; KEGG: bcb:BCB4264_A3811 collagen triple helix repeat protein; collagen triple helix repeat domain-containing protein 1955389 8357750 Cpin_1608 Chitinophaga pinensis DSM 2588 collagen triple helix repeat domain-containing protein YP_003121305.1 1952084 R 485918 CDS YP_003121306.1 256420653 8357751 complement(1955415..1955909) 1 NC_013132.1 KEGG: similar to atrophin-1 like protein; hypothetical protein 1955909 8357751 Cpin_1609 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121306.1 1955415 R 485918 CDS YP_003121307.1 256420654 8357752 complement(1955946..1957118) 1 NC_013132.1 hypothetical protein 1957118 8357752 Cpin_1610 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121307.1 1955946 R 485918 CDS YP_003121308.1 256420655 8357753 complement(1957136..1957636) 1 NC_013132.1 hypothetical protein 1957636 8357753 Cpin_1611 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121308.1 1957136 R 485918 CDS YP_003121309.1 256420656 8357754 1958036..1960183 1 NC_013132.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: glo:Glov_1343 translation elongation factor G; translation elongation factor G 1960183 8357754 Cpin_1612 Chitinophaga pinensis DSM 2588 translation elongation factor G YP_003121309.1 1958036 D 485918 CDS YP_003121310.1 256420657 8357755 1960638..1961237 1 NC_013132.1 KEGG: ngk:NGK_0365 outer membrane protein; hypothetical protein 1961237 8357755 Cpin_1613 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121310.1 1960638 D 485918 CDS YP_003121311.1 256420658 8357756 1963747..1964052 1 NC_013132.1 TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: sus:Acid_5119 30S ribosomal protein S10; 30S ribosomal protein S10 1964052 8357756 Cpin_1614 Chitinophaga pinensis DSM 2588 30S ribosomal protein S10 YP_003121311.1 1963747 D 485918 CDS YP_003121312.1 256420659 8357757 1964266..1964883 1 NC_013132.1 PFAM: ribosomal protein L3; KEGG: hypothetical protein; 50S ribosomal protein L3 1964883 8357757 Cpin_1615 Chitinophaga pinensis DSM 2588 50S ribosomal protein L3 YP_003121312.1 1964266 D 485918 CDS YP_003121313.1 256420660 8357758 1964885..1965523 1 NC_013132.1 PFAM: ribosomal protein L4/L1e; KEGG: hypothetical protein; 50S ribosomal protein L4 1965523 8357758 Cpin_1616 Chitinophaga pinensis DSM 2588 50S ribosomal protein L4 YP_003121313.1 1964885 D 485918 CDS YP_003121314.1 256420661 8357759 1965580..1965879 1 NC_013132.1 PFAM: ribosomal protein L25/L23; KEGG: mxa:MXAN_3301 50S ribosomal protein L23; 50S ribosomal protein L25 1965879 8357759 Cpin_1617 Chitinophaga pinensis DSM 2588 50S ribosomal protein L25 YP_003121314.1 1965580 D 485918 CDS YP_003121315.1 256420662 8357760 1965966..1966799 1 NC_013132.1 TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: gur:Gura_1070 50S ribosomal protein L2; 50S ribosomal protein L2 1966799 8357760 Cpin_1618 Chitinophaga pinensis DSM 2588 50S ribosomal protein L2 YP_003121315.1 1965966 D 485918 CDS YP_003121316.1 256420663 8357761 1966883..1967149 1 NC_013132.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: ank:AnaeK_1937 ribosomal protein S19; 30S ribosomal protein S19 1967149 8357761 Cpin_1619 Chitinophaga pinensis DSM 2588 30S ribosomal protein S19 YP_003121316.1 1966883 D 485918 CDS YP_003121317.1 256420664 8357762 1967236..1967595 1 NC_013132.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: asa:ASA_4082 ribosomal protein L22; 50S ribosomal protein L22 1967595 8357762 Cpin_1620 Chitinophaga pinensis DSM 2588 50S ribosomal protein L22 YP_003121317.1 1967236 D 485918 CDS YP_003121318.1 256420665 8357763 1967639..1968439 1 NC_013132.1 KEGG: mch:Mchl_2446 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 1968439 8357763 Cpin_1621 Chitinophaga pinensis DSM 2588 30S ribosomal protein S3 YP_003121318.1 1967639 D 485918 CDS YP_003121319.1 256420666 8357764 1968483..1968902 1 NC_013132.1 TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: pla:Plav_2743 50S ribosomal protein L16; 50S ribosomal protein L16 1968902 8357764 Cpin_1622 Chitinophaga pinensis DSM 2588 50S ribosomal protein L16 YP_003121319.1 1968483 D 485918 CDS YP_003121320.1 256420667 8357765 1968972..1969178 1 NC_013132.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: dvu:DVU1311 50S ribosomal protein L29; 50S ribosomal protein L29 1969178 8357765 Cpin_1623 Chitinophaga pinensis DSM 2588 50S ribosomal protein L29 YP_003121320.1 1968972 D 485918 CDS YP_003121321.1 256420668 8357766 1969241..1969498 1 NC_013132.1 PFAM: ribosomal protein S17; KEGG: vpa:VP0266 ribosomal protein S17; 30S ribosomal protein S17 1969498 8357766 Cpin_1624 Chitinophaga pinensis DSM 2588 30S ribosomal protein S17 YP_003121321.1 1969241 D 485918 CDS YP_003121322.1 256420669 8357767 1969570..1969938 1 NC_013132.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: bcy:Bcer98_0114 50S ribosomal protein L14; 50S ribosomal protein L14 1969938 8357767 Cpin_1625 Chitinophaga pinensis DSM 2588 50S ribosomal protein L14 YP_003121322.1 1969570 D 485918 CDS YP_003121323.1 256420670 8357768 1970096..1970434 1 NC_013132.1 TIGRFAM: ribosomal protein L24; KEGG: bha:BH0145 50S ribosomal protein L24; 50S ribosomal protein L24 1970434 8357768 Cpin_1626 Chitinophaga pinensis DSM 2588 50S ribosomal protein L24 YP_003121323.1 1970096 D 485918 CDS YP_003121324.1 256420671 8357769 1970434..1971009 1 NC_013132.1 PFAM: ribosomal protein L5; KEGG: bsu:BSU01280 50S ribosomal protein L5; 50S ribosomal protein L5 1971009 8357769 Cpin_1627 Chitinophaga pinensis DSM 2588 50S ribosomal protein L5 YP_003121324.1 1970434 D 485918 CDS YP_003121325.1 256420672 8357770 1971081..1971350 1 NC_013132.1 PFAM: ribosomal protein S14; KEGG: bsu:BSU08880 30S ribosomal protein S14; 30S ribosomal protein S14 1971350 8357770 Cpin_1628 Chitinophaga pinensis DSM 2588 30S ribosomal protein S14 YP_003121325.1 1971081 D 485918 CDS YP_003121326.1 256420673 8357771 1971479..1971877 1 NC_013132.1 PFAM: ribosomal protein S8; KEGG: bha:BH0148 30S ribosomal protein S8; 30S ribosomal protein S8 1971877 8357771 Cpin_1629 Chitinophaga pinensis DSM 2588 30S ribosomal protein S8 YP_003121326.1 1971479 D 485918 CDS YP_003121327.1 256420674 8357772 1972030..1972584 1 NC_013132.1 PFAM: ribosomal protein L6; KEGG: bcu:BCAH820_0137 ribosomal protein L6; 50S ribosomal protein L6 1972584 8357772 Cpin_1630 Chitinophaga pinensis DSM 2588 50S ribosomal protein L6 YP_003121327.1 1972030 D 485918 CDS YP_003121328.1 256420675 8357773 1972671..1973024 1 NC_013132.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: mno:Mnod_1924 ribosomal protein L18; 50S ribosomal protein L18 1973024 8357773 Cpin_1631 Chitinophaga pinensis DSM 2588 50S ribosomal protein L18 YP_003121328.1 1972671 D 485918 CDS YP_003121329.1 256420676 8357774 1973061..1973579 1 NC_013132.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5; ribosomal protein S5 domain protein; KEGG: gsu:GSU2840 30S ribosomal protein S5; 30S ribosomal protein S5 1973579 8357774 Cpin_1632 Chitinophaga pinensis DSM 2588 30S ribosomal protein S5 YP_003121329.1 1973061 D 485918 CDS YP_003121330.1 256420677 8357775 1973650..1973835 1 NC_013132.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: pin:Ping_3506 ribosomal protein L30; 50S ribosomal protein L30 1973835 8357775 Cpin_1633 Chitinophaga pinensis DSM 2588 50S ribosomal protein L30 YP_003121330.1 1973650 D 485918 CDS YP_003121331.1 256420678 8357776 1973943..1974389 1 NC_013132.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: ppd:Ppro_0699 50S ribosomal protein L15; 50S ribosomal protein L15 1974389 8357776 Cpin_1634 Chitinophaga pinensis DSM 2588 50S ribosomal protein L15 YP_003121331.1 1973943 D 485918 CDS YP_003121332.1 256420679 8357777 1974564..1975907 1 NC_013132.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1975907 secY 8357777 secY Chitinophaga pinensis DSM 2588 preprotein translocase subunit SecY YP_003121332.1 1974564 D 485918 CDS YP_003121333.1 256420680 8357778 1976127..1976927 1 NC_013132.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bha:BH0156 methionine aminopeptidase; methionine aminopeptidase 1976927 8357778 Cpin_1636 Chitinophaga pinensis DSM 2588 methionine aminopeptidase YP_003121333.1 1976127 D 485918 CDS YP_003121334.1 256420681 8357779 1977042..1977260 1 NC_013132.1 TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: bha:BH0158 translation initiation factor IF-1; translation initiation factor IF-1 1977260 8357779 Cpin_1637 Chitinophaga pinensis DSM 2588 translation initiation factor IF-1 YP_003121334.1 1977042 D 485918 CDS YP_003121335.1 256420682 8357780 1977287..1977403 1 NC_013132.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: rru:Rru_A2467 50S ribosomal protein L36P; 50S ribosomal protein L36 1977403 8357780 Cpin_1638 Chitinophaga pinensis DSM 2588 50S ribosomal protein L36 YP_003121335.1 1977287 D 485918 CDS YP_003121336.1 256420683 8357781 1977442..1977822 1 NC_013132.1 PFAM: ribosomal protein S13; KEGG: sfu:Sfum_1579 30S ribosomal protein S13; 30S ribosomal protein S13 1977822 8357781 Cpin_1639 Chitinophaga pinensis DSM 2588 30S ribosomal protein S13 YP_003121336.1 1977442 D 485918 CDS YP_003121337.1 256420684 8357782 1977922..1978323 1 NC_013132.1 PFAM: ribosomal protein S11; KEGG: bha:BH0161 30S ribosomal protein S11; 30S ribosomal protein S11 1978323 8357782 Cpin_1640 Chitinophaga pinensis DSM 2588 30S ribosomal protein S11 YP_003121337.1 1977922 D 485918 CDS YP_003121338.1 256420685 8357783 1978488..1979093 1 NC_013132.1 KEGG: mca:MCA2348 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 1979093 8357783 Cpin_1641 Chitinophaga pinensis DSM 2588 30S ribosomal protein S4 YP_003121338.1 1978488 D 485918 CDS YP_003121339.1 256420686 8357784 1979220..1980215 1 NC_013132.1 KEGG: rru:Rru_A2664 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 1980215 8357784 Cpin_1642 Chitinophaga pinensis DSM 2588 DNA-directed RNA polymerase subunit alpha YP_003121339.1 1979220 D 485918 CDS YP_003121340.1 256420687 8357785 1980289..1980768 1 NC_013132.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: ajs:Ajs_0407 50S ribosomal protein L17P; 50S ribosomal protein L17 1980768 8357785 Cpin_1643 Chitinophaga pinensis DSM 2588 50S ribosomal protein L17 YP_003121340.1 1980289 D 485918 CDS YP_003121341.1 256420688 8357786 1980943..1981770 1 NC_013132.1 hypothetical protein 1981770 8357786 Cpin_1644 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121341.1 1980943 D 485918 CDS YP_003121342.1 256420689 8357787 1981866..1982975 1 NC_013132.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1982975 8357787 Cpin_1645 Chitinophaga pinensis DSM 2588 carbamoyl phosphate synthase small subunit YP_003121342.1 1981866 D 485918 CDS YP_003121343.1 256420690 8357788 complement(1983586..1984812) 1 NC_013132.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1984812 8357788 Cpin_1646 Chitinophaga pinensis DSM 2588 aspartate aminotransferase YP_003121343.1 1983586 R 485918 CDS YP_003121344.1 256420691 8357789 complement(1984967..1985359) 1 NC_013132.1 PFAM: protein of unknown function DUF1573; KEGG: gur:Gura_3399 hypothetical protein; hypothetical protein 1985359 8357789 Cpin_1647 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121344.1 1984967 R 485918 CDS YP_003121345.1 256420692 8357790 1985567..1987966 1 NC_013132.1 PFAM: transketolase domain protein; dehydrogenase E1 component; transketolase central region; KEGG: hypothetical protein; transketolase 1987966 8357790 Cpin_1648 Chitinophaga pinensis DSM 2588 transketolase YP_003121345.1 1985567 D 485918 CDS YP_003121346.1 256420693 8357791 1988391..1989101 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcy:Bcer98_0802 two component transcriptional regulator; winged helix family two component transcriptional regulator 1989101 8357791 Cpin_1649 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003121346.1 1988391 D 485918 CDS YP_003121347.1 256420694 8357792 complement(1989198..1989908) 1 NC_013132.1 PFAM: protein of unknown function DUF28; KEGG: afw:Anae109_1612 hypothetical protein; hypothetical protein 1989908 8357792 Cpin_1650 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121347.1 1989198 R 485918 CDS YP_003121348.1 256420695 8357793 complement(1990068..1991573) 1 NC_013132.1 PFAM: amino acid permease-associated region; KEGG: sus:Acid_4944 amino acid permease-associated region; amino acid permease-associated protein 1991573 8357793 Cpin_1651 Chitinophaga pinensis DSM 2588 amino acid permease-associated protein YP_003121348.1 1990068 R 485918 CDS YP_003121349.1 256420696 8357794 1991774..1993135 1 NC_013132.1 PFAM: sodium:dicarboxylate symporter; KEGG: aha:AHA_2605 proton/sodium-glutamate symport protein; sodium:dicarboxylate symporter 1993135 8357794 Cpin_1652 Chitinophaga pinensis DSM 2588 sodium:dicarboxylate symporter YP_003121349.1 1991774 D 485918 CDS YP_003121350.1 256420697 8357795 1993267..1993911 1 NC_013132.1 PFAM: hypothetical protein; KEGG: scl:sce6413 hypothetical protein; hypothetical protein 1993911 8357795 Cpin_1653 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121350.1 1993267 D 485918 CDS YP_003121351.1 256420698 8357796 1993950..1995188 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: gbm:Gbem_2478 major facilitator superfamily MFS_1; major facilitator superfamily protein 1995188 8357796 Cpin_1654 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003121351.1 1993950 D 485918 CDS YP_003121352.1 256420699 8357797 complement(1995244..1995705) 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: aba:Acid345_2954 transcriptional regulator, MarR family; MarR family transcriptional regulator 1995705 8357797 Cpin_1655 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003121352.1 1995244 R 485918 CDS YP_003121353.1 256420700 8357798 complement(1995967..1996905) 1 NC_013132.1 KEGG: dal:Dalk_0818 malate dehydrogenase, NAD- dependent; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase 1996905 8357798 Cpin_1656 Chitinophaga pinensis DSM 2588 malate dehydrogenase YP_003121353.1 1995967 R 485918 CDS YP_003121354.1 256420701 8357799 complement(1996988..1997503) 1 NC_013132.1 KEGG: abu:Abu_1448 lipoprotein thiredoxin; hypothetical protein 1997503 8357799 Cpin_1657 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121354.1 1996988 R 485918 CDS YP_003121355.1 256420702 8357800 1997872..1998438 1 NC_013132.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; KEGG: bcy:Bcer98_2891 elongation factor P; translation elongation factor P 1998438 8357800 Cpin_1658 Chitinophaga pinensis DSM 2588 translation elongation factor P YP_003121355.1 1997872 D 485918 CDS YP_003121356.1 256420703 8357801 1998492..1998965 1 NC_013132.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bha:BH2788 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1998965 8357801 Cpin_1659 Chitinophaga pinensis DSM 2588 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_003121356.1 1998492 D 485918 CDS YP_003121357.1 256420704 8357802 1999074..2000411 1 NC_013132.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; carbamoyl- phosphate synthetase large chain domain protein; KEGG: glo:Glov_1598 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 2000411 8357802 Cpin_1660 Chitinophaga pinensis DSM 2588 acetyl-CoA carboxylase, biotin carboxylase YP_003121357.1 1999074 D 485918 CDS YP_003121358.1 256420705 8357803 complement(2000488..2001312) 1 NC_013132.1 hypothetical protein 2001312 8357803 Cpin_1661 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121358.1 2000488 R 485918 CDS YP_003121359.1 256420706 8357804 complement(2001500..2003698) 1 NC_013132.1 PFAM: glutamine synthetase catalytic region; KEGG: gbm:Gbem_3079 glutamine synthetase catalytic region; glutamine synthetase 2003698 8357804 Cpin_1662 Chitinophaga pinensis DSM 2588 glutamine synthetase YP_003121359.1 2001500 R 485918 CDS YP_003121360.1 256420707 8357805 2004060..2006312 1 NC_013132.1 KEGG: bce:BC0329 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase II 2006312 8357805 Cpin_1663 Chitinophaga pinensis DSM 2588 phosphoribosylformylglycinamidine synthase II YP_003121360.1 2004060 D 485918 CDS YP_003121361.1 256420708 8357806 complement(2007931..2009172) 1 NC_013132.1 PFAM: aminotransferase class I and II; KEGG: hch:HCH_06031 7-keto-8-aminopelargonate synthetase and related enzyme; glycine C-acetyltransferase 2009172 8357806 Cpin_1664 Chitinophaga pinensis DSM 2588 glycine C-acetyltransferase YP_003121361.1 2007931 R 485918 CDS YP_003121362.1 256420709 8357807 2009278..2010984 1 NC_013132.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: sus:Acid_0822 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 2010984 8357807 Cpin_1665 Chitinophaga pinensis DSM 2588 type I phosphodiesterase/nucleotide pyrophosphatase YP_003121362.1 2009278 D 485918 CDS YP_003121363.1 256420710 8357808 2011081..2011860 1 NC_013132.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: aba:Acid345_1426 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2011860 8357808 Cpin_1666 Chitinophaga pinensis DSM 2588 enoyl-CoA hydratase/isomerase YP_003121363.1 2011081 D 485918 CDS YP_003121364.1 256420711 8357809 2011987..2012631 1 NC_013132.1 hypothetical protein 2012631 8357809 Cpin_1667 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121364.1 2011987 D 485918 CDS YP_003121365.1 256420712 8357810 complement(2012726..2013109) 1 NC_013132.1 hypothetical protein 2013109 8357810 Cpin_1668 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121365.1 2012726 R 485918 CDS YP_003121366.1 256420713 8357811 2013262..2014692 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 2014692 8357811 Cpin_1669 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121366.1 2013262 D 485918 CDS YP_003121367.1 256420714 8357812 2014972..2015733 1 NC_013132.1 PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: (2r)-phospho-3-sulfolactate synthase; K01767; phosphosulfolactate synthase 2015733 8357812 Cpin_1670 Chitinophaga pinensis DSM 2588 phosphosulfolactate synthase YP_003121367.1 2014972 D 485918 CDS YP_003121368.1 256420715 8357813 2015751..2016485 1 NC_013132.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: bja:bll1059 shikimate 5-dehydrogenase; shikimate dehydrogenase 2016485 8357813 Cpin_1671 Chitinophaga pinensis DSM 2588 shikimate dehydrogenase YP_003121368.1 2015751 D 485918 CDS YP_003121369.1 256420716 8357814 complement(2016756..2017553) 1 NC_013132.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: rlt:Rleg2_0420 methyltransferase type 11; type 12 methyltransferase 2017553 8357814 Cpin_1672 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003121369.1 2016756 R 485918 CDS YP_003121370.1 256420717 8357815 2017657..2018355 1 NC_013132.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: hypothetical protein; K03177 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 2018355 8357815 Cpin_1673 Chitinophaga pinensis DSM 2588 tRNA pseudouridine synthase B YP_003121370.1 2017657 D 485918 CDS YP_003121371.1 256420718 8357816 complement(2018434..2020866) 1 NC_013132.1 PFAM: surface antigen (D15); KEGG: gur:Gura_3237 surface antigen (D15); surface antigen (D15) 2020866 8357816 Cpin_1674 Chitinophaga pinensis DSM 2588 surface antigen (D15) YP_003121371.1 2018434 R 485918 CDS YP_003121372.1 256420719 8357817 2020977..2021723 1 NC_013132.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: vpa:VP0954 RNA methyltransferase; tRNA/rRNA methyltransferase SpoU 2021723 8357817 Cpin_1675 Chitinophaga pinensis DSM 2588 tRNA/rRNA methyltransferase SpoU YP_003121372.1 2020977 D 485918 CDS YP_003121373.1 256420720 8357818 complement(2021911..2023143) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: dds:Ddes_0613 lipoprotein releasing system, transmembrane protein, LolC/E family; hypothetical protein 2023143 8357818 Cpin_1676 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121373.1 2021911 R 485918 CDS YP_003121374.1 256420721 8357819 2023293..2024585 1 NC_013132.1 hypothetical protein 2024585 8357819 Cpin_1677 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121374.1 2023293 D 485918 CDS YP_003121375.1 256420722 8357820 complement(2024713..2026029) 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A2001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2026029 8357820 Cpin_1678 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003121375.1 2024713 R 485918 CDS YP_003121376.1 256420723 8357821 complement(2026277..2026927) 1 NC_013132.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 2026927 8357821 Cpin_1679 Chitinophaga pinensis DSM 2588 translaldolase YP_003121376.1 2026277 R 485918 CDS YP_003121377.1 256420724 8357823 2027518..2027967 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2027967 8357823 Cpin_1680 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121377.1 2027518 D 485918 CDS YP_003121378.1 256420725 8357824 2028061..2028531 1 NC_013132.1 PFAM: RDD domain containing protein; KEGG: scl:sce0130 hypothetical protein; RDD domain-containing protein 2028531 8357824 Cpin_1681 Chitinophaga pinensis DSM 2588 RDD domain-containing protein YP_003121378.1 2028061 D 485918 CDS YP_003121379.1 256420726 8357825 complement(2028532..2029257) 1 NC_013132.1 PFAM: RDD domain containing protein; KEGG: hch:HCH_00261 hypothetical protein; RDD domain-containing protein 2029257 8357825 Cpin_1682 Chitinophaga pinensis DSM 2588 RDD domain-containing protein YP_003121379.1 2028532 R 485918 CDS YP_003121380.1 256420727 8357826 2029487..2030470 1 NC_013132.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: bha:BH0733 hypothetical protein; hypothetical protein 2030470 8357826 Cpin_1683 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121380.1 2029487 D 485918 CDS YP_003121381.1 256420728 8357827 2030467..2031327 1 NC_013132.1 KEGG: mxa:MXAN_2477 hypothetical protein; hypothetical protein 2031327 8357827 Cpin_1684 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121381.1 2030467 D 485918 CDS YP_003121382.1 256420729 8357828 2031324..2032565 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2032565 8357828 Cpin_1685 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121382.1 2031324 D 485918 CDS YP_003121383.1 256420730 8357829 2032565..2033545 1 NC_013132.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bce:BC2117 MoxR protein; ATPase AAA 2033545 8357829 Cpin_1686 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003121383.1 2032565 D 485918 CDS YP_003121384.1 256420731 8357830 2033556..2034896 1 NC_013132.1 PFAM: protein of unknown function DUF58; KEGG: pfl:PFL_4794 hypothetical protein; hypothetical protein 2034896 8357830 Cpin_1687 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121384.1 2033556 D 485918 CDS YP_003121385.1 256420732 8357831 complement(2034885..2035562) 1 NC_013132.1 hypothetical protein 2035562 8357831 Cpin_1688 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121385.1 2034885 R 485918 CDS YP_003121386.1 256420733 8357832 2035955..2036422 1 NC_013132.1 hypothetical protein 2036422 8357832 Cpin_1689 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121386.1 2035955 D 485918 CDS YP_003121387.1 256420734 8357833 complement(2036462..2036851) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: ban:BA3457 hypothetical protein; HxlR family transcriptional regulator 2036851 8357833 Cpin_1690 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003121387.1 2036462 R 485918 CDS YP_003121388.1 256420735 8357834 2036956..2037318 1 NC_013132.1 KEGG: sus:Acid_3038 hypothetical protein; hypothetical protein 2037318 8357834 Cpin_1691 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121388.1 2036956 D 485918 CDS YP_003121389.1 256420736 8357835 2037329..2037931 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mms:mma_0547 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 2037931 8357835 Cpin_1692 Chitinophaga pinensis DSM 2588 NAD(P)H dehydrogenase (quinone) YP_003121389.1 2037329 D 485918 CDS YP_003121390.1 256420737 8357836 complement(2038056..2038667) 1 NC_013132.1 hypothetical protein 2038667 8357836 Cpin_1693 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121390.1 2038056 R 485918 CDS YP_003121391.1 256420738 8357837 2038674..2039603 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 2039603 8357837 Cpin_1694 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121391.1 2038674 D 485918 CDS YP_003121392.1 256420739 8357838 complement(2039736..2040737) 1 NC_013132.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bba:Bd2156 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 2040737 8357838 Cpin_1695 Chitinophaga pinensis DSM 2588 2-nitropropane dioxygenase YP_003121392.1 2039736 R 485918 CDS YP_003121393.1 256420740 8357839 complement(2040753..2041343) 1 NC_013132.1 KEGG: hap:HAPS_1135 riboflavin synthase subunit alpha; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 2041343 8357839 Cpin_1696 Chitinophaga pinensis DSM 2588 riboflavin synthase subunit alpha YP_003121393.1 2040753 R 485918 CDS YP_003121394.1 256420741 8357840 2041459..2041653 1 NC_013132.1 TIGRFAM: ribosomal protein S21; KEGG: mxa:MXAN_5201 30S ribosomal protein S21; 30S ribosomal protein S21 2041653 8357840 Cpin_1697 Chitinophaga pinensis DSM 2588 30S ribosomal protein S21 YP_003121394.1 2041459 D 485918 CDS YP_003121395.1 256420742 8357841 2041736..2042680 1 NC_013132.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: tyrosine recombinase XerC; K03733 integrase/recombinase XerC; integrase family protein 2042680 8357841 Cpin_1698 Chitinophaga pinensis DSM 2588 integrase family protein YP_003121395.1 2041736 D 485918 CDS YP_003121396.1 256420743 8357842 2042872..2043171 1 NC_013132.1 KEGG: vpa:VP2671 sigma-54 modulation protein; sigma-54 modulation protein 2043171 8357842 Cpin_1699 Chitinophaga pinensis DSM 2588 sigma-54 modulation protein YP_003121396.1 2042872 D 485918 CDS YP_003121397.1 256420744 8357848 2044162..2045349 1 NC_013132.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: bmu:Bmul_0247 elongation factor Tu; translation elongation factor Tu 2045349 8357848 Cpin_1700 Chitinophaga pinensis DSM 2588 translation elongation factor Tu YP_003121397.1 2044162 D 485918 CDS YP_003121398.1 256420745 8357850 2045605..2045796 1 NC_013132.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: saz:Sama_0200 preprotein translocase subunit SecE; preprotein translocase subunit SecE 2045796 8357850 Cpin_1701 Chitinophaga pinensis DSM 2588 preprotein translocase subunit SecE YP_003121398.1 2045605 D 485918 CDS YP_003121399.1 256420746 8357851 2045809..2046399 1 NC_013132.1 KEGG: bcs:BCAN_A1271 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor 2046399 8357851 Cpin_1702 Chitinophaga pinensis DSM 2588 NusG antitermination factor YP_003121399.1 2045809 D 485918 CDS YP_003121400.1 256420747 8357852 complement(2046471..2047046) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2047046 8357852 Cpin_1703 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121400.1 2046471 R 485918 CDS YP_003121401.1 256420748 8357853 2047096..2048367 1 NC_013132.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: predicted protein; transglutaminase 2048367 8357853 Cpin_1704 Chitinophaga pinensis DSM 2588 transglutaminase YP_003121401.1 2047096 D 485918 CDS YP_003121402.1 256420749 8357854 2048497..2048616 1 NC_013132.1 hypothetical protein 2048616 8357854 Cpin_1705 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121402.1 2048497 D 485918 CDS YP_003121403.1 256420750 8357855 2048636..2049079 1 NC_013132.1 KEGG: dds:Ddes_1632 ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 2049079 8357855 Cpin_1706 Chitinophaga pinensis DSM 2588 50S ribosomal protein L11 YP_003121403.1 2048636 D 485918 CDS YP_003121404.1 256420751 8357856 2049125..2049814 1 NC_013132.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 2049814 rplA 8357856 rplA Chitinophaga pinensis DSM 2588 50S ribosomal protein L1 YP_003121404.1 2049125 D 485918 CDS YP_003121405.1 256420752 8357857 2049855..2050388 1 NC_013132.1 PFAM: ribosomal protein L10; KEGG: pzu:PHZ_c1216 50S ribosomal protein L10; 50S ribosomal protein L10 2050388 8357857 Cpin_1708 Chitinophaga pinensis DSM 2588 50S ribosomal protein L10 YP_003121405.1 2049855 D 485918 CDS YP_003121406.1 256420753 8357858 2050485..2050859 1 NC_013132.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 2050859 rplL 8357858 rplL Chitinophaga pinensis DSM 2588 50S ribosomal protein L7/L12 YP_003121406.1 2050485 D 485918 CDS YP_003121407.1 256420754 8357859 2051104..2054913 1 NC_013132.1 KEGG: DNA-directed RNA polymerase, beta subunit; K03043 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; DNA-directed RNA polymerase subunit beta 2054913 8357859 Cpin_1710 Chitinophaga pinensis DSM 2588 DNA-directed RNA polymerase subunit beta YP_003121407.1 2051104 D 485918 CDS YP_003121408.1 256420755 8357860 2055058..2059353 1 NC_013132.1 KEGG: gbm:Gbem_0927 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 2059353 8357860 Cpin_1711 Chitinophaga pinensis DSM 2588 DNA-directed RNA polymerase subunit beta' YP_003121408.1 2055058 D 485918 CDS YP_003121409.1 256420756 8357861 2059443..2060165 1 NC_013132.1 KEGG: aba:Acid345_4137 hypothetical protein; hypothetical protein 2060165 8357861 Cpin_1712 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121409.1 2059443 D 485918 CDS YP_003121410.1 256420757 8357862 2060311..2060934 1 NC_013132.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: mxa:MXAN_4727 outer membrane protein, OmpH family; outer membrane chaperone Skp 2060934 8357862 Cpin_1713 Chitinophaga pinensis DSM 2588 outer membrane chaperone Skp YP_003121410.1 2060311 D 485918 CDS YP_003121411.1 256420758 8357863 2061023..2062444 1 NC_013132.1 PFAM: amino acid permease-associated region; KEGG: sus:Acid_4943 amino acid permease-associated region; amino acid permease-associated protein 2062444 8357863 Cpin_1714 Chitinophaga pinensis DSM 2588 amino acid permease-associated protein YP_003121411.1 2061023 D 485918 CDS YP_003121412.1 256420759 8357864 2063188..2064162 1 NC_013132.1 PFAM: FecR protein; KEGG: pat:Patl_1521 FecR; anti-FecI sigma factor FecR 2064162 8357864 Cpin_1715 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121412.1 2063188 D 485918 CDS YP_003121413.1 256420760 8357865 2064274..2067429 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_0272 TonB-dependent receptor; TonB-dependent receptor 2067429 8357865 Cpin_1716 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003121413.1 2064274 D 485918 CDS YP_003121414.1 256420761 8357866 2067522..2068916 1 NC_013132.1 KEGG: scl:sce5067 hypothetical protein; hypothetical protein 2068916 8357866 Cpin_1717 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121414.1 2067522 D 485918 CDS YP_003121415.1 256420762 8357867 2068985..2069737 1 NC_013132.1 hypothetical protein 2069737 8357867 Cpin_1718 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121415.1 2068985 D 485918 CDS YP_003121416.1 256420763 8357868 complement(2069869..2071251) 1 NC_013132.1 PFAM: peptidase S41; KEGG: scl:sce0169 peptidase; peptidase S41 2071251 8357868 Cpin_1719 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003121416.1 2069869 R 485918 CDS YP_003121417.1 256420764 8357869 complement(2071272..2071790) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor; ECF subfamily RNA polymerase sigma-24 subunit 2071790 8357869 Cpin_1720 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121417.1 2071272 R 485918 CDS YP_003121418.1 256420765 8357870 2071945..2072547 1 NC_013132.1 KEGG: dvu:DVU1886 hypothetical protein; hypothetical protein 2072547 8357870 Cpin_1721 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121418.1 2071945 D 485918 CDS YP_003121419.1 256420766 8357871 2072551..2073603 1 NC_013132.1 PFAM: glycosyl transferase family 9; KEGG: dde:Dde_1629 heptosyltransferase family protein; glycosyl transferase family protein 2073603 8357871 Cpin_1722 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003121419.1 2072551 D 485918 CDS YP_003121420.1 256420767 8357873 2073988..2074383 1 NC_013132.1 PFAM: thioesterase superfamily protein; KEGG: pag:PLES_04451 long-chain acyl-CoA thioester hydrolase family protein; thioesterase superfamily protein 2074383 8357873 Cpin_1723 Chitinophaga pinensis DSM 2588 thioesterase superfamily protein YP_003121420.1 2073988 D 485918 CDS YP_003121421.1 256420768 8357874 complement(2074386..2075051) 1 NC_013132.1 KEGG: scl:sce7770 hypothetical protein; hypothetical protein 2075051 8357874 Cpin_1724 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121421.1 2074386 R 485918 CDS YP_003121422.1 256420769 8357875 complement(2075164..2075970) 1 NC_013132.1 PFAM: integral membrane protein TerC; KEGG: gme:Gmet_1782 integral membrane protein TerC; integral membrane protein TerC 2075970 8357875 Cpin_1725 Chitinophaga pinensis DSM 2588 integral membrane protein TerC YP_003121422.1 2075164 R 485918 CDS YP_003121423.1 256420770 8357876 complement(2076002..2077450) 1 NC_013132.1 KEGG: dps:DP0077 hypothetical protein; hypothetical protein 2077450 8357876 Cpin_1726 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121423.1 2076002 R 485918 CDS YP_003121424.1 256420771 8357877 2077586..2078284 1 NC_013132.1 PFAM: haloacid dehalogenase; KEGG: hypothetical protein; haloacid dehalogenase 2078284 8357877 Cpin_1727 Chitinophaga pinensis DSM 2588 haloacid dehalogenase YP_003121424.1 2077586 D 485918 CDS YP_003121425.1 256420772 8357878 2078453..2080480 1 NC_013132.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_6519 hypothetical protein; hypothetical protein 2080480 8357878 Cpin_1728 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121425.1 2078453 D 485918 CDS YP_003121426.1 256420773 8357879 2080497..2082821 1 NC_013132.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_5559 alpha-L-rhamnosidase; alpha-L-rhamnosidase 2082821 8357879 Cpin_1729 Chitinophaga pinensis DSM 2588 alpha-L-rhamnosidase YP_003121426.1 2080497 D 485918 CDS YP_003121427.1 256420774 8357880 complement(2083092..2083427) 1 NC_013132.1 PFAM: peptidase S24 and S26 domain protein; KEGG: scl:sce5277 hypothetical protein; peptidase S24 and S26 domain-containing protein 2083427 8357880 Cpin_1730 Chitinophaga pinensis DSM 2588 peptidase S24 and S26 domain-containing protein YP_003121427.1 2083092 R 485918 CDS YP_003121428.1 256420775 8357881 complement(2083842..2084777) 1 NC_013132.1 KEGG: pca:Pcar_3022 hypothetical protein; hypothetical protein 2084777 8357881 Cpin_1731 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121428.1 2083842 R 485918 CDS YP_003121429.1 256420776 8357882 complement(2084815..2085450) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rfr:Rfer_0894 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 2085450 8357882 Cpin_1732 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003121429.1 2084815 R 485918 CDS YP_003121430.1 256420777 8357883 complement(2085425..2087488) 1 NC_013132.1 KEGG: dol:Dole_0030 ATPase domain-containing protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; hypothetical protein; histidine kinase 2087488 8357883 Cpin_1733 Chitinophaga pinensis DSM 2588 histidine kinase YP_003121430.1 2085425 R 485918 CDS YP_003121431.1 256420778 8357884 2087922..2091332 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2091332 8357884 Cpin_1734 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121431.1 2087922 D 485918 CDS YP_003121432.1 256420779 8357885 2091344..2092792 1 NC_013132.1 hypothetical protein 2092792 8357885 Cpin_1735 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121432.1 2091344 D 485918 CDS YP_003121433.1 256420780 8357886 2092823..2093734 1 NC_013132.1 hypothetical protein 2093734 8357886 Cpin_1736 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121433.1 2092823 D 485918 CDS YP_003121434.1 256420781 8357887 2093783..2095084 1 NC_013132.1 hypothetical protein 2095084 8357887 Cpin_1737 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121434.1 2093783 D 485918 CDS YP_003121435.1 256420782 8357888 2095109..2104027 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; Parallel beta- helix repeat; KEGG: hypothetical protein; PKD domain-containing protein 2104027 8357888 Cpin_1738 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003121435.1 2095109 D 485918 CDS YP_003121436.1 256420783 8357889 2104030..2108145 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: hypothetical protein; PKD domain-containing protein 2108145 8357889 Cpin_1739 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003121436.1 2104030 D 485918 CDS YP_003121437.1 256420784 8357890 2108192..2109199 1 NC_013132.1 hypothetical protein 2109199 8357890 Cpin_1740 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121437.1 2108192 D 485918 CDS YP_003121438.1 256420785 8357891 2109218..2110978 1 NC_013132.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: xop:PXO_02523 OmpA family outer membrane protein; OmpA/MotB domain-containing protein 2110978 8357891 Cpin_1741 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003121438.1 2109218 D 485918 CDS YP_003121439.1 256420786 8357892 2110982..2112019 1 NC_013132.1 hypothetical protein 2112019 8357892 Cpin_1742 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121439.1 2110982 D 485918 CDS YP_003121440.1 256420787 8357893 2112109..2112687 1 NC_013132.1 KEGG: rfr:Rfer_4079 hypothetical protein; hypothetical protein 2112687 8357893 Cpin_1743 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121440.1 2112109 D 485918 CDS YP_003121441.1 256420788 8357894 2112782..2115037 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: sus:Acid_5149 alpha-1,2-mannosidase; alpha-1,2-mannosidase 2115037 8357894 Cpin_1744 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003121441.1 2112782 D 485918 CDS YP_003121442.1 256420789 8357895 complement(2115267..2115569) 1 NC_013132.1 SMART: regulatory protein ArsR; KEGG: pau:PA14_14310 transcriptional regulator; ArsR family transcriptional regulator 2115569 8357895 Cpin_1745 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003121442.1 2115267 R 485918 CDS YP_003121443.1 256420790 8357896 2115672..2116979 1 NC_013132.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: amc:MADE_00206 diaminopimelate decarboxylase; diaminopimelate decarboxylase 2116979 8357896 Cpin_1746 Chitinophaga pinensis DSM 2588 diaminopimelate decarboxylase YP_003121443.1 2115672 D 485918 CDS YP_003121444.1 256420791 8357897 2117012..2117665 1 NC_013132.1 KEGG: ccv:CCV52592_1800 riboflavin biosynthesis protein; riboflavin biosynthesis protein 2117665 8357897 Cpin_1747 Chitinophaga pinensis DSM 2588 riboflavin biosynthesis protein YP_003121444.1 2117012 D 485918 CDS YP_003121445.1 256420792 8357898 2117735..2118613 1 NC_013132.1 KEGG: dal:Dalk_0746 hypothetical protein; hypothetical protein 2118613 8357898 Cpin_1748 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121445.1 2117735 D 485918 CDS YP_003121446.1 256420793 8357899 2118892..2119434 1 NC_013132.1 PFAM: protein of unknown function DUF1349; KEGG: sme:SM_b20675 hypothetical protein; hypothetical protein 2119434 8357899 Cpin_1749 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121446.1 2118892 D 485918 CDS YP_003121447.1 256420794 8357900 complement(2119885..2122284) 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein; glycoside hydrolase 2122284 8357900 Cpin_1750 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121447.1 2119885 R 485918 CDS YP_003121448.1 256420795 8357901 complement(2122528..2124258) 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 43; KEGG: sde:Sde_0598 alpha-L-arabinofuranosidase; coagulation factor 5/8 type domain-containing protein 2124258 8357901 Cpin_1751 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003121448.1 2122528 R 485918 CDS YP_003121449.1 256420796 8357902 complement(2124679..2125551) 1 NC_013132.1 KEGG: scl:sce5344 no similarity; hypothetical protein 2125551 8357902 Cpin_1752 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121449.1 2124679 R 485918 CDS YP_003121450.1 256420797 8357903 2125672..2126682 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: mxa:MXAN_1509 Ser/Thr protein phosphatase family protein; metallophosphoesterase 2126682 8357903 Cpin_1753 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003121450.1 2125672 D 485918 CDS YP_003121451.1 256420798 8357904 2126990..2128708 1 NC_013132.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: hch:HCH_01981 pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzyme; thiamine pyrophosphate domain-containing TPP-binding protein 2128708 8357904 Cpin_1754 Chitinophaga pinensis DSM 2588 thiamine pyrophosphate domain-containing TPP-binding protein YP_003121451.1 2126990 D 485918 CDS YP_003121452.1 256420799 8357905 2128748..2130808 1 NC_013132.1 KEGG: bur:Bcep18194_C6673 hypothetical protein; hypothetical protein 2130808 8357905 Cpin_1755 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121452.1 2128748 D 485918 CDS YP_003121453.1 256420800 8357906 complement(2130912..2131511) 1 NC_013132.1 KEGG: swd:Swoo_2283 hypothetical protein; hypothetical protein 2131511 8357906 Cpin_1756 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121453.1 2130912 R 485918 CDS YP_003121454.1 256420801 8357907 complement(2131650..2133155) 1 NC_013132.1 KEGG: mxa:MXAN_2366 lipoprotein; lipoprotein 2133155 8357907 Cpin_1757 Chitinophaga pinensis DSM 2588 lipoprotein YP_003121454.1 2131650 R 485918 CDS YP_003121455.1 256420802 8357908 2133571..2134170 1 NC_013132.1 KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 2134170 8357908 Cpin_1758 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003121455.1 2133571 D 485918 CDS YP_003121456.1 256420803 8357909 2134254..2135006 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_6587 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2135006 8357909 Cpin_1759 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003121456.1 2134254 D 485918 CDS YP_003121457.1 256420804 8357910 complement(2135169..2135699) 1 NC_013132.1 KEGG: bcr:BCAH187_A1243 hypothetical protein; hypothetical protein 2135699 8357910 Cpin_1760 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121457.1 2135169 R 485918 CDS YP_003121458.1 256420805 8357911 2135806..2136468 1 NC_013132.1 hypothetical protein 2136468 8357911 Cpin_1761 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121458.1 2135806 D 485918 CDS YP_003121459.1 256420806 8357912 complement(2136480..2137085) 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: lpp:plpp0081 hypothetical protein; type 11 methyltransferase 2137085 8357912 Cpin_1762 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003121459.1 2136480 R 485918 CDS YP_003121460.1 256420807 8357913 complement(2137115..2137945) 1 NC_013132.1 KEGG: aba:Acid345_4418 hypothetical protein; hypothetical protein 2137945 8357913 Cpin_1763 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121460.1 2137115 R 485918 CDS YP_003121461.1 256420808 8357914 2138078..2138245 1 NC_013132.1 hypothetical protein 2138245 8357914 Cpin_1764 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121461.1 2138078 D 485918 CDS YP_003121462.1 256420809 8357915 2138334..2139212 1 NC_013132.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_2097 hypothetical protein; AraC family transcriptional regulator 2139212 8357915 Cpin_1765 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121462.1 2138334 D 485918 CDS YP_003121463.1 256420810 8357916 2139271..2140251 1 NC_013132.1 KEGG: bsu:BSU12260 hypothetical protein; hypothetical protein 2140251 8357916 Cpin_1766 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121463.1 2139271 D 485918 CDS YP_003121464.1 256420811 8357917 complement(2140232..2141134) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 2141134 8357917 Cpin_1767 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121464.1 2140232 R 485918 CDS YP_003121465.1 256420812 8357918 complement(2141137..2142054) 1 NC_013132.1 PFAM: NmrA family protein; KEGG: rru:Rru_A2334 nucleoside-diphosphate-sugar epimerase; NmrA family protein 2142054 8357918 Cpin_1768 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003121465.1 2141137 R 485918 CDS YP_003121466.1 256420813 8357919 complement(2142134..2142547) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_2395 glyoxalase family protein; bleomycin resistance protein 2142547 8357919 Cpin_1769 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003121466.1 2142134 R 485918 CDS YP_003121467.1 256420814 8357921 complement(2143000..2144583) 1 NC_013132.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein; peptidase S8/S53 subtilisin kexin sedolisin 2144583 8357921 Cpin_1770 Chitinophaga pinensis DSM 2588 peptidase S8/S53 subtilisin kexin sedolisin YP_003121467.1 2143000 R 485918 CDS YP_003121468.1 256420815 8357922 2144652..2144810 1 NC_013132.1 hypothetical protein 2144810 8357922 Cpin_1771 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121468.1 2144652 D 485918 CDS YP_003121469.1 256420816 8357923 complement(2144851..2145645) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pat:Patl_1909 AraC family transcriptional regulator; AraC family transcriptional regulator 2145645 8357923 Cpin_1772 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121469.1 2144851 R 485918 CDS YP_003121470.1 256420817 8357924 2145767..2147074 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: pol:Bpro_5561 outer membrane efflux protein; outer membrane efflux protein 2147074 8357924 Cpin_1773 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003121470.1 2145767 D 485918 CDS YP_003121471.1 256420818 8357925 2147080..2148147 1 NC_013132.1 PFAM: secretion protein HlyD family protein; KEGG: mca:MCA2257 HlyD family secretion protein; secretion protein HlyD family protein 2148147 8357925 Cpin_1774 Chitinophaga pinensis DSM 2588 secretion protein HlyD family protein YP_003121471.1 2147080 D 485918 CDS YP_003121472.1 256420819 8357926 2148140..2149735 1 NC_013132.1 KEGG: glo:Glov_1631 drug resistance transporter, EmrB/QacA subfamily; hypothetical protein 2149735 8357926 Cpin_1775 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121472.1 2148140 D 485918 CDS YP_003121473.1 256420820 8357927 complement(2149916..2151427) 1 NC_013132.1 hypothetical protein 2151427 8357927 Cpin_1776 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121473.1 2149916 R 485918 CDS YP_003121474.1 256420821 8357928 2152270..2155170 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2155170 8357928 Cpin_1777 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121474.1 2152270 D 485918 CDS YP_003121475.1 256420822 8357929 2155170..2156684 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2156684 8357929 Cpin_1778 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121475.1 2155170 D 485918 CDS YP_003121476.1 256420823 8357930 2156702..2158282 1 NC_013132.1 PFAM: carbohydrate-binding protein; beta-Ig- H3/fasciclin; SMART: cellulose binding type IV; KEGG: sde:Sde_1393 thiol oxidoreductase-like; carbohydrate-binding protein 2158282 8357930 Cpin_1779 Chitinophaga pinensis DSM 2588 carbohydrate-binding protein YP_003121476.1 2156702 D 485918 CDS YP_003121477.1 256420824 8357931 2158296..2159336 1 NC_013132.1 hypothetical protein 2159336 8357931 Cpin_1780 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121477.1 2158296 D 485918 CDS YP_003121478.1 256420825 8357932 2159329..2162496 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2162496 8357932 Cpin_1781 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121478.1 2159329 D 485918 CDS YP_003121479.1 256420826 8357933 2162515..2164047 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2164047 8357933 Cpin_1782 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121479.1 2162515 D 485918 CDS YP_003121480.1 256420827 8357934 2164058..2164759 1 NC_013132.1 hypothetical protein 2164759 8357934 Cpin_1783 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121480.1 2164058 D 485918 CDS YP_003121481.1 256420828 8357935 2164778..2166349 1 NC_013132.1 KEGG: glo:Glov_1449 hypothetical protein; hypothetical protein 2166349 8357935 Cpin_1784 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121481.1 2164778 D 485918 CDS YP_003121482.1 256420829 8357936 2166367..2168091 1 NC_013132.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: ppf:Pput_1007 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 2168091 8357936 Cpin_1785 Chitinophaga pinensis DSM 2588 type I phosphodiesterase/nucleotide pyrophosphatase YP_003121482.1 2166367 D 485918 CDS YP_003121483.1 256420830 8357937 2168078..2169505 1 NC_013132.1 KEGG: cps:CPS_2654 PKD domain-containing protein; hypothetical protein 2169505 8357937 Cpin_1786 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121483.1 2168078 D 485918 CDS YP_003121484.1 256420831 8357938 complement(2169587..2170846) 1 NC_013132.1 KEGG: pau:PA14_26165 hypothetical protein; hypothetical protein 2170846 8357938 Cpin_1787 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121484.1 2169587 R 485918 CDS YP_003121485.1 256420832 8357939 2170923..2171450 1 NC_013132.1 KEGG: sun:SUN_0739 hypothetical protein; hypothetical protein 2171450 8357939 Cpin_1788 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121485.1 2170923 D 485918 CDS YP_003121486.1 256420833 8357940 2171467..2171985 1 NC_013132.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: cti:RALTA_A1478 conserved hypothetical protein, high-affinity ADP-ribose binding domain; Appr-1-p processing protein 2171985 8357940 Cpin_1789 Chitinophaga pinensis DSM 2588 Appr-1-p processing protein YP_003121486.1 2171467 D 485918 CDS YP_003121487.1 256420834 8357941 2172104..2173258 1 NC_013132.1 KEGG: vei:Veis_0526 hypothetical protein; hypothetical protein 2173258 8357941 Cpin_1790 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121487.1 2172104 D 485918 CDS YP_003121488.1 256420835 8357942 complement(2173252..2173647) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sfu:Sfum_2731 response regulator receiver protein; response regulator receiver protein 2173647 8357942 Cpin_1791 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121488.1 2173252 R 485918 CDS YP_003121489.1 256420836 8357943 2174290..2175672 1 NC_013132.1 KEGG: Hypothetical protein CBG09235; hypothetical protein 2175672 8357943 Cpin_1792 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121489.1 2174290 D 485918 CDS YP_003121490.1 256420837 8357944 complement(2176001..2176198) 1 NC_013132.1 hypothetical protein 2176198 8357944 Cpin_1793 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121490.1 2176001 R 485918 CDS YP_003121491.1 256420838 8357945 2176436..2176948 1 NC_013132.1 hypothetical protein 2176948 8357945 Cpin_1794 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121491.1 2176436 D 485918 CDS YP_003121492.1 256420839 8357946 2176985..2177989 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pha:PSHAb0030 AraC-like transcription regulator; AraC family transcriptional regulator 2177989 8357946 Cpin_1795 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121492.1 2176985 D 485918 CDS YP_003121493.1 256420840 8357947 2178808..2180541 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver; KEGG: cvi:CV_2213 sensor histidine kinase/response regulator; histidine kinase 2180541 8357947 Cpin_1796 Chitinophaga pinensis DSM 2588 histidine kinase YP_003121493.1 2178808 D 485918 CDS YP_003121494.1 256420841 8357948 2180654..2181688 1 NC_013132.1 PFAM: terpene synthase metal-binding domain protein; KEGG: scl:sce6369 pentalenene synthase; terpene synthase metal-binding domain-containing protein 2181688 8357948 Cpin_1797 Chitinophaga pinensis DSM 2588 terpene synthase metal-binding domain-containing protein YP_003121494.1 2180654 D 485918 CDS YP_003121495.1 256420842 8357949 2181816..2183672 1 NC_013132.1 PFAM: glycoside hydrolase, family 20, catalytic core; beta-N-acetylhexosaminidase-like; KEGG: cps:CPS_3960 beta-hexosaminidase; beta-N-acetylhexosaminidase 2183672 8357949 Cpin_1798 Chitinophaga pinensis DSM 2588 beta-N-acetylhexosaminidase YP_003121495.1 2181816 D 485918 CDS YP_003121496.1 256420843 8357950 2183816..2185504 1 NC_013132.1 KEGG: bba:Bd1449 cell wall surface anchor family protein; hypothetical protein 2185504 8357950 Cpin_1799 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121496.1 2183816 D 485918 CDS YP_003121497.1 256420844 8357951 2186845..2190021 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2190021 8357951 Cpin_1800 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121497.1 2186845 D 485918 CDS YP_003121498.1 256420845 8357952 2190033..2191796 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2191796 8357952 Cpin_1801 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121498.1 2190033 D 485918 CDS YP_003121499.1 256420846 8357953 2191860..2193965 1 NC_013132.1 KEGG: sde:Sde_2311 hypothetical protein; hypothetical protein 2193965 8357953 Cpin_1802 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121499.1 2191860 D 485918 CDS YP_003121500.1 256420847 8357954 2193958..2197050 1 NC_013132.1 KEGG: cvi:CV_0707 hypothetical protein; hypothetical protein 2197050 8357954 Cpin_1803 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121500.1 2193958 D 485918 CDS YP_003121501.1 256420848 8357955 2197061..2198464 1 NC_013132.1 KEGG: atc:AGR_L_146 hypothetical protein; hypothetical protein 2198464 8357955 Cpin_1804 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121501.1 2197061 D 485918 CDS YP_003121502.1 256420849 8357956 2198481..2199383 1 NC_013132.1 KEGG: sus:Acid_1249 pectinesterase; hypothetical protein 2199383 8357956 Cpin_1805 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121502.1 2198481 D 485918 CDS YP_003121503.1 256420850 8357957 2199380..2201221 1 NC_013132.1 KEGG: sde:Sde_2315 hypothetical protein; hypothetical protein 2201221 8357957 Cpin_1806 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121503.1 2199380 D 485918 CDS YP_003121504.1 256420851 8357958 2201221..2204976 1 NC_013132.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_5559 alpha-L-rhamnosidase; alpha-L-rhamnosidase 2204976 8357958 Cpin_1807 Chitinophaga pinensis DSM 2588 alpha-L-rhamnosidase YP_003121504.1 2201221 D 485918 CDS YP_003121505.1 256420852 8357959 2204967..2205866 1 NC_013132.1 PFAM: xylose isomerase; KEGG: sus:Acid_2595 xylose isomerase domain- containing protein; xylose isomerase 2205866 8357959 Cpin_1808 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003121505.1 2204967 D 485918 CDS YP_003121506.1 256420853 8357960 2205938..2210308 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: nar:Saro_1727 glycoside hydrolase family protein; glycoside hydrolase 2210308 8357960 Cpin_1809 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121506.1 2205938 D 485918 CDS YP_003121507.1 256420854 8357961 2210312..2212696 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sus:Acid_4901 glycoside hydrolase family protein; glycoside hydrolase 2212696 8357961 Cpin_1810 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121507.1 2210312 D 485918 CDS YP_003121508.1 256420855 8357962 2212706..2215477 1 NC_013132.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein; alpha-L-rhamnosidase 2215477 8357962 Cpin_1811 Chitinophaga pinensis DSM 2588 alpha-L-rhamnosidase YP_003121508.1 2212706 D 485918 CDS YP_003121509.1 256420856 8357963 2215739..2216719 1 NC_013132.1 PFAM: pectinesterase; KEGG: xcb:XC_0125 pectin methylesterase-like protein; pectinesterase 2216719 8357963 Cpin_1812 Chitinophaga pinensis DSM 2588 pectinesterase YP_003121509.1 2215739 D 485918 CDS YP_003121510.1 256420857 8357964 2216701..2218275 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2218275 8357964 Cpin_1813 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121510.1 2216701 D 485918 CDS YP_003121511.1 256420858 8357965 complement(2218272..2218898) 1 NC_013132.1 KEGG: ypb:YPTS_1818 hypothetical protein; hypothetical protein 2218898 8357965 Cpin_1814 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121511.1 2218272 R 485918 CDS YP_003121512.1 256420859 8357966 complement(2218963..2219154) 1 NC_013132.1 hypothetical protein 2219154 8357966 Cpin_1815 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121512.1 2218963 R 485918 CDS YP_003121513.1 256420860 8357967 2219548..2221803 1 NC_013132.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: sal:Sala_1014 glycoside hydrolase family protein; glycoside hydrolase 2221803 8357967 Cpin_1816 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121513.1 2219548 D 485918 CDS YP_003121514.1 256420861 8357968 2222031..2222885 1 NC_013132.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2222885 hisG 8357968 hisG Chitinophaga pinensis DSM 2588 ATP phosphoribosyltransferase YP_003121514.1 2222031 D 485918 CDS YP_003121515.1 256420862 8357969 2223002..2224291 1 NC_013132.1 KEGG: ypm:YP_1437 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase; histidinol dehydrogenase 2224291 8357969 Cpin_1818 Chitinophaga pinensis DSM 2588 histidinol dehydrogenase YP_003121515.1 2223002 D 485918 CDS YP_003121516.1 256420863 8357970 2224303..2225358 1 NC_013132.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: hypothetical protein; histidinol-phosphate aminotransferase 2225358 8357970 Cpin_1819 Chitinophaga pinensis DSM 2588 histidinol-phosphate aminotransferase YP_003121516.1 2224303 D 485918 CDS YP_003121517.1 256420864 8357971 2225437..2226573 1 NC_013132.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2226573 8357971 Cpin_1820 Chitinophaga pinensis DSM 2588 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_003121517.1 2225437 D 485918 CDS YP_003121518.1 256420865 8357972 2226782..2226919 1 NC_013132.1 hypothetical protein 2226919 8357972 Cpin_1821 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121518.1 2226782 D 485918 CDS YP_003121519.1 256420866 8357973 2226998..2228407 1 NC_013132.1 PFAM: chorismate binding-like; anthranilate synthase component I domain protein; KEGG: sat:SYN_01947 anthranilate synthase component I; anthranilate synthase 2228407 8357973 Cpin_1822 Chitinophaga pinensis DSM 2588 anthranilate synthase YP_003121519.1 2226998 D 485918 CDS YP_003121520.1 256420867 8357974 2228409..2228978 1 NC_013132.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: msu:MS2194 para-aminobenzoate synthase component II; glutamine amidotransferase of anthranilate synthase 2228978 8357974 Cpin_1823 Chitinophaga pinensis DSM 2588 glutamine amidotransferase of anthranilate synthase YP_003121520.1 2228409 D 485918 CDS YP_003121521.1 256420868 8357975 2228989..2229984 1 NC_013132.1 KEGG: anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 2229984 8357975 Cpin_1824 Chitinophaga pinensis DSM 2588 anthranilate phosphoribosyltransferase YP_003121521.1 2228989 D 485918 CDS YP_003121522.1 256420869 8357976 2229981..2230781 1 NC_013132.1 PFAM: indole-3-glycerol phosphate synthase; KEGG: pmy:Pmen_3944 indole-3-glycerol-phosphate synthase; Indole-3-glycerol phosphate synthase 2230781 8357976 Cpin_1825 Chitinophaga pinensis DSM 2588 Indole-3-glycerol phosphate synthase YP_003121522.1 2229981 D 485918 CDS YP_003121523.1 256420870 8357977 2230778..2231413 1 NC_013132.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: hypothetical protein; K01817 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 2231413 8357977 Cpin_1826 Chitinophaga pinensis DSM 2588 phosphoribosylanthranilate isomerase YP_003121523.1 2230778 D 485918 CDS YP_003121524.1 256420871 8357978 2231421..2232647 1 NC_013132.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2232647 8357978 Cpin_1827 Chitinophaga pinensis DSM 2588 tryptophan synthase subunit beta YP_003121524.1 2231421 D 485918 CDS YP_003121525.1 256420872 8357979 2232657..2233433 1 NC_013132.1 KEGG: xfa:XF1376 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 2233433 8357979 Cpin_1828 Chitinophaga pinensis DSM 2588 tryptophan synthase subunit alpha YP_003121525.1 2232657 D 485918 CDS YP_003121526.1 256420873 8357980 2233437..2234030 1 NC_013132.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: fph:Fphi_0065 imidazole glycerol phosphate synthase subunit HisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2234030 8357980 Cpin_1829 Chitinophaga pinensis DSM 2588 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_003121526.1 2233437 D 485918 CDS YP_003121527.1 256420874 8357981 2234034..2235203 1 NC_013132.1 KEGG: hypothetical protein; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; GCN5-related N-acetyltransferase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2235203 8357981 Cpin_1830 Chitinophaga pinensis DSM 2588 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_003121527.1 2234034 D 485918 CDS YP_003121528.1 256420875 8357982 2235347..2236102 1 NC_013132.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: bha:BH3578 imidazole glycerol phosphate synthase subunit HisF; Imidazole glycerol phosphate synthase cyclase subunit 2236102 8357982 Cpin_1831 Chitinophaga pinensis DSM 2588 Imidazole glycerol phosphate synthase cyclase subunit YP_003121528.1 2235347 D 485918 CDS YP_003121529.1 256420876 8357983 2236222..2236830 1 NC_013132.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: fph:Fphi_0062 phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP diphosphatase 2236830 8357983 Cpin_1832 Chitinophaga pinensis DSM 2588 phosphoribosyl-ATP diphosphatase YP_003121529.1 2236222 D 485918 CDS YP_003121530.1 256420877 8357984 2236855..2237937 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 2237937 8357984 Cpin_1833 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121530.1 2236855 D 485918 CDS YP_003121531.1 256420878 8357985 2238067..2239212 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 2239212 8357985 Cpin_1834 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121531.1 2238067 D 485918 CDS YP_003121532.1 256420879 8357986 2239343..2239699 1 NC_013132.1 PFAM: Penicillinase repressor; KEGG: rde:RD1_4115 transcriptional regulator; CopY family transcriptional regulator 2239699 8357986 Cpin_1835 Chitinophaga pinensis DSM 2588 CopY family transcriptional regulator YP_003121532.1 2239343 D 485918 CDS YP_003121533.1 256420880 8357987 2239705..2241279 1 NC_013132.1 PFAM: peptidase M56 BlaR1; KEGG: cak:Caul_3733 peptidase M56 BlaR1; peptidase M56 BlaR1 2241279 8357987 Cpin_1836 Chitinophaga pinensis DSM 2588 peptidase M56 BlaR1 YP_003121533.1 2239705 D 485918 CDS YP_003121534.1 256420881 8357988 complement(2241459..2242508) 1 NC_013132.1 PFAM: protein of unknown function DUF323; KEGG: reu:Reut_B4568 hypothetical protein; Non-specific serine/threonine protein kinase 2242508 8357988 Cpin_1837 Chitinophaga pinensis DSM 2588 Non-specific serine/threonine protein kinase YP_003121534.1 2241459 R 485918 CDS YP_003121535.1 256420882 8357989 2242611..2243966 1 NC_013132.1 KEGG: rfr:Rfer_1111 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; beta-galactosidase 2243966 8357989 Cpin_1838 Chitinophaga pinensis DSM 2588 beta-galactosidase YP_003121535.1 2242611 D 485918 CDS YP_003121536.1 256420883 8357990 complement(2244072..2245325) 1 NC_013132.1 hypothetical protein 2245325 8357990 Cpin_1839 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121536.1 2244072 R 485918 CDS YP_003121537.1 256420884 8357991 complement(2245325..2246659) 1 NC_013132.1 hypothetical protein 2246659 8357991 Cpin_1840 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121537.1 2245325 R 485918 CDS YP_003121538.1 256420885 8357992 2246911..2247930 1 NC_013132.1 PFAM: Kelch repeat-containing protein; KEGG: hypothetical protein LOC100013485; K10443 kelch-like protein 2/3; Kelch repeat-containing protein 2247930 8357992 Cpin_1841 Chitinophaga pinensis DSM 2588 Kelch repeat-containing protein YP_003121538.1 2246911 D 485918 CDS YP_003121539.1 256420886 8357993 2247923..2248294 1 NC_013132.1 hypothetical protein 2248294 8357993 Cpin_1842 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121539.1 2247923 D 485918 CDS YP_003121540.1 256420887 8357994 2248473..2249729 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_1132 signal transduction histidine kinase, LytS; signal transduction histidine kinase LytS 2249729 8357994 Cpin_1843 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003121540.1 2248473 D 485918 CDS YP_003121541.1 256420888 8357995 2249704..2250414 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 2250414 8357995 Cpin_1844 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003121541.1 2249704 D 485918 CDS YP_003121542.1 256420889 8357996 complement(2250509..2251636) 1 NC_013132.1 PFAM: aminotransferase class V; KEGG: hypothetical protein; cysteine desulfurase 2251636 8357996 Cpin_1845 Chitinophaga pinensis DSM 2588 cysteine desulfurase YP_003121542.1 2250509 R 485918 CDS YP_003121543.1 256420890 8357997 2251918..2252028 1 NC_013132.1 hypothetical protein 2252028 8357997 Cpin_1846 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121543.1 2251918 D 485918 CDS YP_003121544.1 256420891 8357998 complement(2252285..2253667) 1 NC_013132.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: phosphoglucomutase/phosphomannomutase family protein; K01840 phosphomannomutase; phosphoglucosamine mutase 2253667 8357998 Cpin_1847 Chitinophaga pinensis DSM 2588 phosphoglucosamine mutase YP_003121544.1 2252285 R 485918 CDS YP_003121545.1 256420892 8357999 2253967..2255904 1 NC_013132.1 PFAM: sulfatase; KEGG: abo:ABO_1110 phosphoglycerol transferase; sulfatase 2255904 8357999 Cpin_1848 Chitinophaga pinensis DSM 2588 sulfatase YP_003121545.1 2253967 D 485918 CDS YP_003121546.1 256420893 8358000 2255928..2256695 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: scl:sce9032 methyltransferase; type 11 methyltransferase 2256695 8358000 Cpin_1849 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003121546.1 2255928 D 485918 CDS YP_003121547.1 256420894 8358001 2256698..2257276 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bba:Bd0143 phosphatase; PA-phosphatase-like phosphoesterase 2257276 8358001 Cpin_1850 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003121547.1 2256698 D 485918 CDS YP_003121548.1 256420895 8358002 2257273..2258004 1 NC_013132.1 PFAM: zinc/iron permease; KEGG: mxa:MXAN_5682 metal cation transporter, zinc (Zn2+)-iron (Fe2+) permease (ZIP) family; zinc/iron permease 2258004 8358002 Cpin_1851 Chitinophaga pinensis DSM 2588 zinc/iron permease YP_003121548.1 2257273 D 485918 CDS YP_003121549.1 256420896 8358003 2258029..2259330 1 NC_013132.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: sfu:Sfum_4050 protein of unknown function DUF21; hypothetical protein 2259330 8358003 Cpin_1852 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121549.1 2258029 D 485918 CDS YP_003121550.1 256420897 8358004 2259497..2261035 1 NC_013132.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bcy:Bcer98_2312 histidine ammonia-lyase; histidine ammonia-lyase 2261035 8358004 Cpin_1853 Chitinophaga pinensis DSM 2588 histidine ammonia-lyase YP_003121550.1 2259497 D 485918 CDS YP_003121551.1 256420898 8358005 2261057..2261785 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein; short-chain dehydrogenase/reductase SDR 2261785 8358005 Cpin_1854 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003121551.1 2261057 D 485918 CDS YP_003121552.1 256420899 8358006 2261892..2263115 1 NC_013132.1 PFAM: beta-ketoacyl synthase; KEGG: pca:Pcar_2666 3-oxoacyl-(acyl-carrier- protein) synthase I; beta-ketoacyl synthase 2263115 8358006 Cpin_1855 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003121552.1 2261892 D 485918 CDS YP_003121553.1 256420900 8358007 2263354..2263611 1 NC_013132.1 KEGG: ppd:Ppro_0908 phosphopantetheine-binding protein; phosphopantetheine-binding protein 2263611 8358007 Cpin_1856 Chitinophaga pinensis DSM 2588 phosphopantetheine-binding protein YP_003121553.1 2263354 D 485918 CDS YP_003121554.1 256420901 8358008 2263611..2264501 1 NC_013132.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: saz:Sama_3384 glycosyl transferase, group 2 family protein; lipid A biosynthesis acyltransferase 2264501 8358008 Cpin_1857 Chitinophaga pinensis DSM 2588 lipid A biosynthesis acyltransferase YP_003121554.1 2263611 D 485918 CDS YP_003121555.1 256420902 8358009 2264509..2264928 1 NC_013132.1 KEGG: ppd:Ppro_0911 radical SAM domain-containing protein; hypothetical protein 2264928 8358009 Cpin_1858 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121555.1 2264509 D 485918 CDS YP_003121556.1 256420903 8358010 2264943..2265647 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2265647 8358010 Cpin_1859 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121556.1 2264943 D 485918 CDS YP_003121557.1 256420904 8358011 2265666..2266115 1 NC_013132.1 PFAM: thioesterase superfamily protein; KEGG: pca:Pcar_2654 thioesterase; thioesterase superfamily protein 2266115 8358011 Cpin_1860 Chitinophaga pinensis DSM 2588 thioesterase superfamily protein YP_003121557.1 2265666 D 485918 CDS YP_003121558.1 256420905 8358012 2266112..2267260 1 NC_013132.1 PFAM: beta-ketoacyl synthase; KEGG: vfi:VF_0857 3-oxoacyl-(acyl carrier protein) synthase I; beta-ketoacyl synthase 2267260 8358012 Cpin_1861 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003121558.1 2266112 D 485918 CDS YP_003121559.1 256420906 8358013 2267278..2268345 1 NC_013132.1 PFAM: methyltransferase type 12; O- methyltransferase family 2; methyltransferase type 11; KEGG: spl:Spea_1680 O-methyltransferase; type 12 methyltransferase 2268345 8358013 Cpin_1862 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003121559.1 2267278 D 485918 CDS YP_003121560.1 256420907 8358014 2268368..2269615 1 NC_013132.1 PFAM: tryptophan halogenase; monooxygenase FAD- binding; FAD dependent oxidoreductase; KEGG: shw:Sputw3181_0290 monooxygenase, FAD-binding; tryptophan halogenase 2269615 8358014 Cpin_1863 Chitinophaga pinensis DSM 2588 tryptophan halogenase YP_003121560.1 2268368 D 485918 CDS YP_003121561.1 256420908 8358015 2269617..2270228 1 NC_013132.1 KEGG: dps:DP1854 hypothetical protein; hypothetical protein 2270228 8358015 Cpin_1864 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121561.1 2269617 D 485918 CDS YP_003121562.1 256420909 8358016 2270253..2270513 1 NC_013132.1 PFAM: phosphopantetheine-binding; KEGG: ppd:Ppro_0923 acyl-carrier protein-like protein; phosphopantetheine-binding protein 2270513 8358016 Cpin_1865 Chitinophaga pinensis DSM 2588 phosphopantetheine-binding protein YP_003121562.1 2270253 D 485918 CDS YP_003121563.1 256420910 8358017 2270513..2271727 1 NC_013132.1 PFAM: beta-ketoacyl synthase; KEGG: ppd:Ppro_0926 beta-ketoacyl synthase; beta-ketoacyl synthase 2271727 8358017 Cpin_1866 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003121563.1 2270513 D 485918 CDS YP_003121564.1 256420911 8358018 2271732..2272796 1 NC_013132.1 PFAM: beta-ketoacyl synthase; KEGG: gur:Gura_3605 beta-ketoacyl synthase; beta-ketoacyl synthase 2272796 8358018 Cpin_1867 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003121564.1 2271732 D 485918 CDS YP_003121565.1 256420912 8358019 2272790..2273566 1 NC_013132.1 PFAM: polysaccharide deacetylase; KEGG: scl:sce8406 acetylxylan esterase; polysaccharide deacetylase 2273566 8358019 Cpin_1868 Chitinophaga pinensis DSM 2588 polysaccharide deacetylase YP_003121565.1 2272790 D 485918 CDS YP_003121566.1 256420913 8358020 2273559..2274191 1 NC_013132.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: ppd:Ppro_0912 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 2274191 8358020 Cpin_1869 Chitinophaga pinensis DSM 2588 outer membrane lipoprotein carrier protein LolA YP_003121566.1 2273559 D 485918 CDS YP_003121567.1 256420914 8358021 2274169..2274789 1 NC_013132.1 hypothetical protein 2274789 8358021 Cpin_1870 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121567.1 2274169 D 485918 CDS YP_003121568.1 256420915 8358022 2274786..2275157 1 NC_013132.1 KEGG: azo:azo0259 hypothetical protein; hypothetical protein 2275157 8358022 Cpin_1871 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121568.1 2274786 D 485918 CDS YP_003121569.1 256420916 8358023 2275154..2276359 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_2653 glycosyltransferase; family 2 glycosyl transferase 2276359 8358023 Cpin_1872 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003121569.1 2275154 D 485918 CDS YP_003121570.1 256420917 8358024 2276378..2280253 1 NC_013132.1 PFAM: phospholipid/glycerol acyltransferase; methyltransferase type 11; methyltransferase type 12; SMART: phospholipid/glycerol acyltransferase; KEGG: pca:Pcar_2657 exporter; phospholipid/glycerol acyltransferase 2280253 8358024 Cpin_1873 Chitinophaga pinensis DSM 2588 phospholipid/glycerol acyltransferase YP_003121570.1 2276378 D 485918 CDS YP_003121571.1 256420918 8358025 2280243..2281748 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; KEGG: dps:DP1860 hypothetical protein; all-trans-retinol 13,14-reductase 2281748 8358025 Cpin_1874 Chitinophaga pinensis DSM 2588 all-trans-retinol 13,14-reductase YP_003121571.1 2280243 D 485918 CDS YP_003121572.1 256420919 8358026 2281763..2283451 1 NC_013132.1 PFAM: peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase; KEGG: scl:sce6990 hypothetical protein; peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase 2283451 8358026 Cpin_1875 Chitinophaga pinensis DSM 2588 peptidase C45 acyl-coenzyme A:6- aminopenicillanic acid acyl-transferase YP_003121572.1 2281763 D 485918 CDS YP_003121573.1 256420920 8358027 2283454..2283831 1 NC_013132.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: gur:Gura_2322 holo-acyl-carrier-protein synthase; holo-ACP synthase 2283831 8358027 Cpin_1876 Chitinophaga pinensis DSM 2588 holo-ACP synthase YP_003121573.1 2283454 D 485918 CDS YP_003121574.1 256420921 8358028 2283844..2285133 1 NC_013132.1 KEGG: ppd:Ppro_0910 coenzyme F390 synthetase-like protein; coenzyme F390 synthetase-like protein 2285133 8358028 Cpin_1877 Chitinophaga pinensis DSM 2588 coenzyme F390 synthetase-like protein YP_003121574.1 2283844 D 485918 CDS YP_003121575.1 256420922 8358029 complement(2285134..2285619) 1 NC_013132.1 KEGG: pha:PSHAb0058 orphan protein; hypothetical protein 2285619 8358029 Cpin_1878 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121575.1 2285134 R 485918 CDS YP_003121576.1 256420923 8358030 2285705..2286280 1 NC_013132.1 KEGG: rma:Rmag_0157 hypothetical protein; hypothetical protein 2286280 8358030 Cpin_1879 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121576.1 2285705 D 485918 CDS YP_003121577.1 256420924 8358031 2286324..2288651 1 NC_013132.1 KEGG: cps:CPS_0411 aminopeptidase; aminopeptidase 2288651 8358031 Cpin_1880 Chitinophaga pinensis DSM 2588 aminopeptidase YP_003121577.1 2286324 D 485918 CDS YP_003121578.1 256420925 8358032 complement(2288743..2288934) 1 NC_013132.1 KEGG: xac:XAC1234 hypothetical protein; hypothetical protein 2288934 8358032 Cpin_1881 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121578.1 2288743 R 485918 CDS YP_003121579.1 256420926 8358033 complement(2288952..2289827) 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: cps:CPS_3456 SPFH domain-containing protein/band 7 family protein; hypothetical protein 2289827 8358033 Cpin_1882 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121579.1 2288952 R 485918 CDS YP_003121580.1 256420927 8358034 2289953..2290762 1 NC_013132.1 PFAM: esterase; KEGG: bpy:Bphyt_5901 esterase; esterase 2290762 8358034 Cpin_1883 Chitinophaga pinensis DSM 2588 esterase YP_003121580.1 2289953 D 485918 CDS YP_003121581.1 256420928 8358035 complement(2291008..2292915) 1 NC_013132.1 KEGG: mxa:MXAN_4170 lipoprotein; lipoprotein 2292915 8358035 Cpin_1884 Chitinophaga pinensis DSM 2588 lipoprotein YP_003121581.1 2291008 R 485918 CDS YP_003121582.1 256420929 8358036 complement(2293153..2294739) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2294739 8358036 Cpin_1885 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121582.1 2293153 R 485918 CDS YP_003121583.1 256420930 8358037 complement(2294751..2297942) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2297942 8358037 Cpin_1886 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121583.1 2294751 R 485918 CDS YP_003121584.1 256420931 8358038 complement(2298201..2299793) 1 NC_013132.1 hypothetical protein 2299793 8358038 Cpin_1887 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121584.1 2298201 R 485918 CDS YP_003121585.1 256420932 8358039 complement(2299807..2303268) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2303268 8358039 Cpin_1888 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121585.1 2299807 R 485918 CDS YP_003121586.1 256420933 8358040 complement(2303361..2304365) 1 NC_013132.1 PFAM: FecR protein; KEGG: xau:Xaut_2778 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 2304365 8358040 Cpin_1889 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121586.1 2303361 R 485918 CDS YP_003121587.1 256420934 8358041 complement(2304429..2305028) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: pfl:PFL_0173 RNA polymerase sigma factor; LuxR family transcriptional regulator 2305028 8358041 Cpin_1890 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003121587.1 2304429 R 485918 CDS YP_003121588.1 256420935 8358042 complement(2305247..2306122) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: transcriptional regulator (AraC/XylS family); AraC family transcriptional regulator 2306122 8358042 Cpin_1891 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121588.1 2305247 R 485918 CDS YP_003121589.1 256420936 8358043 2306406..2307443 1 NC_013132.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bcz:pE33L466_0296 degradation activator; LacI family transcriptional regulator 2307443 8358043 Cpin_1892 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003121589.1 2306406 D 485918 CDS YP_003121590.1 256420937 8358044 2307929..2311045 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: hypothetical protein; TonB-dependent receptor plug 2311045 8358044 Cpin_1893 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121590.1 2307929 D 485918 CDS YP_003121591.1 256420938 8358045 2311065..2312957 1 NC_013132.1 hypothetical protein 2312957 8358045 Cpin_1894 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121591.1 2311065 D 485918 CDS YP_003121592.1 256420939 8358046 2313166..2313741 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sus:Acid_2372 redoxin domain-containing protein; alkyl hydroperoxide reductase 2313741 8358046 Cpin_1895 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121592.1 2313166 D 485918 CDS YP_003121593.1 256420940 8358047 2313798..2315099 1 NC_013132.1 KEGG: sus:Acid_2373 calcium-binding EF-hand- containing protein; calcium-binding EF-hand-containing protein 2315099 8358047 Cpin_1896 Chitinophaga pinensis DSM 2588 calcium-binding EF-hand-containing protein YP_003121593.1 2313798 D 485918 CDS YP_003121594.1 256420941 8358048 2315569..2318877 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2318877 8358048 Cpin_1897 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121594.1 2315569 D 485918 CDS YP_003121595.1 256420942 8358049 2318912..2320516 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2320516 8358049 Cpin_1898 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121595.1 2318912 D 485918 CDS YP_003121596.1 256420943 8358050 2320631..2321947 1 NC_013132.1 KEGG: sus:Acid_3914 hypothetical protein; hypothetical protein 2321947 8358050 Cpin_1899 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121596.1 2320631 D 485918 CDS YP_003121597.1 256420944 8358051 complement(2322259..2324865) 1 NC_013132.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2324865 8358051 Cpin_1900 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutS YP_003121597.1 2322259 R 485918 CDS YP_003121598.1 256420945 8358052 2325071..2325598 1 NC_013132.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bba:Bd1732 tRNA/rRNA methyltransferase; tRNA/rRNA methyltransferase SpoU 2325598 8358052 Cpin_1901 Chitinophaga pinensis DSM 2588 tRNA/rRNA methyltransferase SpoU YP_003121598.1 2325071 D 485918 CDS YP_003121599.1 256420946 8358053 2325595..2326461 1 NC_013132.1 TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: sus:Acid_1310 4-hydroxybenzoate polyprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 2326461 8358053 Cpin_1902 Chitinophaga pinensis DSM 2588 4-hydroxybenzoate polyprenyltransferase YP_003121599.1 2325595 D 485918 CDS YP_003121600.1 256420947 8358054 2326471..2326881 1 NC_013132.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: sus:Acid_7012 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF 2326881 8358054 Cpin_1903 Chitinophaga pinensis DSM 2588 Holliday junction resolvase YqgF YP_003121600.1 2326471 D 485918 CDS YP_003121601.1 256420948 8358055 2326926..2327504 1 NC_013132.1 KEGG: hypothetical protein; K01462; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 2327504 8358055 Cpin_1904 Chitinophaga pinensis DSM 2588 peptide deformylase YP_003121601.1 2326926 D 485918 CDS YP_003121602.1 256420949 8358056 2327572..2328120 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 2328120 8358056 Cpin_1905 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121602.1 2327572 D 485918 CDS YP_003121603.1 256420950 8358057 2328125..2328988 1 NC_013132.1 KEGG: aba:Acid345_0544 hypothetical protein; hypothetical protein 2328988 8358057 Cpin_1906 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121603.1 2328125 D 485918 CDS YP_003121604.1 256420951 8358058 2329217..2329768 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 2329768 8358058 Cpin_1907 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121604.1 2329217 D 485918 CDS YP_003121605.1 256420952 8358059 2329771..2330604 1 NC_013132.1 KEGG: aba:Acid345_0544 hypothetical protein; hypothetical protein 2330604 8358059 Cpin_1908 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121605.1 2329771 D 485918 CDS YP_003121606.1 256420953 8358060 2330629..2331561 1 NC_013132.1 hypothetical protein 2331561 8358060 Cpin_1909 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121606.1 2330629 D 485918 CDS YP_003121607.1 256420954 8358061 complement(2331636..2333261) 1 NC_013132.1 hypothetical protein 2333261 8358061 Cpin_1910 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121607.1 2331636 R 485918 CDS YP_003121608.1 256420955 8358062 complement(2333365..2334435) 1 NC_013132.1 KEGG: gur:Gura_0881 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 2334435 8358062 Cpin_1911 Chitinophaga pinensis DSM 2588 RluA family pseudouridine synthase YP_003121608.1 2333365 R 485918 CDS YP_003121609.1 256420956 8358063 2334953..2335669 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 2335669 8358063 Cpin_1912 Chitinophaga pinensis DSM 2588 lipoate-protein ligase B YP_003121609.1 2334953 D 485918 CDS YP_003121610.1 256420957 8358064 complement(2335754..2336545) 1 NC_013132.1 hypothetical protein 2336545 8358064 Cpin_1913 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121610.1 2335754 R 485918 CDS YP_003121611.1 256420958 8358065 complement(2336716..2337630) 1 NC_013132.1 KEGG: asa:ASA_3948 1-aminocyclopropane-1- carboxylate deaminase; 1-aminocyclopropane-1-carboxylate deaminase 2337630 8358065 Cpin_1914 Chitinophaga pinensis DSM 2588 1-aminocyclopropane-1-carboxylate deaminase YP_003121611.1 2336716 R 485918 CDS YP_003121612.1 256420959 8358066 complement(2337717..2340089) 1 NC_013132.1 KEGG: ccs:CCNA_00456 beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 20, catalytic core; PA14 domain protein; SMART: PA14 domain protein; beta-N-acetylhexosaminidase 2340089 8358066 Cpin_1915 Chitinophaga pinensis DSM 2588 beta-N-acetylhexosaminidase YP_003121612.1 2337717 R 485918 CDS YP_003121613.1 256420960 8358067 complement(2340149..2341489) 1 NC_013132.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: sus:Acid_4210 alpha-L-fucosidase; alpha-L-fucosidase 2341489 8358067 Cpin_1916 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003121613.1 2340149 R 485918 CDS YP_003121614.1 256420961 8358068 2341690..2342592 1 NC_013132.1 KEGG: dal:Dalk_1694 hypothetical protein; hypothetical protein 2342592 8358068 Cpin_1917 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121614.1 2341690 D 485918 CDS YP_003121615.1 256420962 8358069 2342772..2342885 1 NC_013132.1 hypothetical protein 2342885 8358069 Cpin_1918 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121615.1 2342772 D 485918 CDS YP_003121616.1 256420963 8358070 2343000..2343905 1 NC_013132.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: dar:Daro_3294 branched-chain amino acid aminotransferase; branched-chain amino acid aminotransferase 2343905 8358070 Cpin_1919 Chitinophaga pinensis DSM 2588 branched-chain amino acid aminotransferase YP_003121616.1 2343000 D 485918 CDS YP_003121617.1 256420964 8358071 2344314..2345993 1 NC_013132.1 KEGG: pin:Ping_2151 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 2345993 8358071 Cpin_1920 Chitinophaga pinensis DSM 2588 dihydroxy-acid dehydratase YP_003121617.1 2344314 D 485918 CDS YP_003121618.1 256420965 8358072 2345983..2347713 1 NC_013132.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: ftn:FTN_1042 acetolactate synthase large subunit; acetolactate synthase large subunit 2347713 8358072 Cpin_1921 Chitinophaga pinensis DSM 2588 acetolactate synthase large subunit YP_003121618.1 2345983 D 485918 CDS YP_003121619.1 256420966 8358073 2347752..2348342 1 NC_013132.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: sfu:Sfum_3025 acetolactate synthase, small subunit; acetolactate synthase small subunit 2348342 8358073 Cpin_1922 Chitinophaga pinensis DSM 2588 acetolactate synthase small subunit YP_003121619.1 2347752 D 485918 CDS YP_003121620.1 256420967 8358074 2348381..2349424 1 NC_013132.1 KEGG: dal:Dalk_0563 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 2349424 8358074 Cpin_1923 Chitinophaga pinensis DSM 2588 ketol-acid reductoisomerase YP_003121620.1 2348381 D 485918 CDS YP_003121621.1 256420968 8358075 2349552..2350808 1 NC_013132.1 TIGRFAM: threonine dehydratase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; threonine dehydratase domain protein; KEGG: bcy:Bcer98_1447 threonine dehydratase; threonine dehydratase 2350808 8358075 Cpin_1924 Chitinophaga pinensis DSM 2588 threonine dehydratase YP_003121621.1 2349552 D 485918 CDS YP_003121622.1 256420969 8358076 2350966..2351919 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: maq:Maqu_0510 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 2351919 8358076 Cpin_1925 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003121622.1 2350966 D 485918 CDS YP_003121623.1 256420970 8358077 2352051..2353181 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; KEGG: hypothetical protein; FAD dependent oxidoreductase 2353181 8358077 Cpin_1926 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003121623.1 2352051 D 485918 CDS YP_003121624.1 256420971 8358078 2353302..2355008 1 NC_013132.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: vfm:VFMJ11_A0389 sodium/glucose cotransporter; SSS sodium solute transporter superfamily protein 2355008 8358078 Cpin_1927 Chitinophaga pinensis DSM 2588 SSS sodium solute transporter superfamily protein YP_003121624.1 2353302 D 485918 CDS YP_003121625.1 256420972 8358079 2355060..2356541 1 NC_013132.1 PFAM: carbohydrate kinase FGGY; KEGG: cja:CJA_3062 xylulose kinase (xylulokinase); carbohydrate kinase FGGY 2356541 8358079 Cpin_1928 Chitinophaga pinensis DSM 2588 carbohydrate kinase FGGY YP_003121625.1 2355060 D 485918 CDS YP_003121626.1 256420973 8358080 2356607..2357935 1 NC_013132.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 2357935 8358080 Cpin_1929 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003121626.1 2356607 D 485918 CDS YP_003121627.1 256420974 8358081 2358220..2359170 1 NC_013132.1 PFAM: aldose 1-epimerase; KEGG: vsp:VS_II1385 galactose mutarotase and related enzymes; aldose 1-epimerase 2359170 8358081 Cpin_1930 Chitinophaga pinensis DSM 2588 aldose 1-epimerase YP_003121627.1 2358220 D 485918 CDS YP_003121628.1 256420975 8358082 2359237..2359422 1 NC_013132.1 PFAM: CsbD family protein; KEGG: par:Psyc_0156 hypothetical protein; CsbD family protein 2359422 8358082 Cpin_1931 Chitinophaga pinensis DSM 2588 CsbD family protein YP_003121628.1 2359237 D 485918 CDS YP_003121629.1 256420976 8358083 2359424..2359573 1 NC_013132.1 KEGG: dar:Daro_2056 hypothetical protein; hypothetical protein 2359573 8358083 Cpin_1932 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121629.1 2359424 D 485918 CDS YP_003121630.1 256420977 8358084 2359672..2360391 1 NC_013132.1 hypothetical protein 2360391 8358084 Cpin_1933 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121630.1 2359672 D 485918 CDS YP_003121631.1 256420978 8358085 complement(2360677..2361771) 1 NC_013132.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rpt:Rpal_2705 peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 2361771 8358085 Cpin_1934 Chitinophaga pinensis DSM 2588 peptidase S1 and S6 chymotrypsin/Hap YP_003121631.1 2360677 R 485918 CDS YP_003121632.1 256420979 8358086 complement(2361820..2362395) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: aha:AHA_4110 ECF subfamily RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 2362395 8358086 Cpin_1935 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121632.1 2361820 R 485918 CDS YP_003121633.1 256420980 8358087 2362663..2362887 1 NC_013132.1 KEGG: GH10507 gene product from transcript GH10507- RA; hypothetical protein 2362887 8358087 Cpin_1936 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121633.1 2362663 D 485918 CDS YP_003121634.1 256420981 8358088 2363445..2364269 1 NC_013132.1 PFAM: prephenate dehydratase; KEGG: mgm:Mmc1_1881 prephenate dehydratase; chorismate mutase 2364269 8358088 Cpin_1937 Chitinophaga pinensis DSM 2588 chorismate mutase YP_003121634.1 2363445 D 485918 CDS YP_003121635.1 256420982 8358089 2364303..2365469 1 NC_013132.1 PFAM: aminotransferase class I and II; KEGG: dvm:DvMF_0361 aminotransferase class I and II; class I and II aminotransferase 2365469 8358089 Cpin_1938 Chitinophaga pinensis DSM 2588 class I and II aminotransferase YP_003121635.1 2364303 D 485918 CDS YP_003121636.1 256420983 8358090 2365475..2366317 1 NC_013132.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 2366317 8358090 Cpin_1939 Chitinophaga pinensis DSM 2588 prephenate dehydrogenase YP_003121636.1 2365475 D 485918 CDS YP_003121637.1 256420984 8358091 2366402..2367493 1 NC_013132.1 PFAM: DAHP synthetase I/KDSA; chorismate mutase; KEGG: sdn:Sden_0622 DAHP synthetase I/KdsA; DAHP synthetase I/KDSA 2367493 8358091 Cpin_1940 Chitinophaga pinensis DSM 2588 DAHP synthetase I/KDSA YP_003121637.1 2366402 D 485918 CDS YP_003121638.1 256420985 8358092 2367508..2368533 1 NC_013132.1 KEGG: dal:Dalk_1432 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 2368533 8358092 Cpin_1941 Chitinophaga pinensis DSM 2588 3-dehydroquinate synthase YP_003121638.1 2367508 D 485918 CDS YP_003121639.1 256420986 8358093 2368546..2369826 1 NC_013132.1 TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); KEGG: kpn:KPN_00936 3-phosphoshikimate 1- carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 2369826 8358093 Cpin_1942 Chitinophaga pinensis DSM 2588 3-phosphoshikimate 1-carboxyvinyltransferase YP_003121639.1 2368546 D 485918 CDS YP_003121640.1 256420987 8358094 2369874..2370872 1 NC_013132.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2370872 8358094 Cpin_1943 Chitinophaga pinensis DSM 2588 chorismate synthase YP_003121640.1 2369874 D 485918 CDS YP_003121641.1 256420988 8358095 complement(2371035..2371757) 1 NC_013132.1 PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: noc:Noc_1219 peptidylprolyl isomerase; FKBP-type peptidylprolyl isomerase 2371757 8358095 Cpin_1944 Chitinophaga pinensis DSM 2588 FKBP-type peptidylprolyl isomerase YP_003121641.1 2371035 R 485918 CDS YP_003121642.1 256420989 8358096 complement(2371828..2373720) 1 NC_013132.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: sus:Acid_0830 peptidase S15; peptidase S15 2373720 8358096 Cpin_1945 Chitinophaga pinensis DSM 2588 peptidase S15 YP_003121642.1 2371828 R 485918 CDS YP_003121643.1 256420990 8358097 complement(2373746..2374096) 1 NC_013132.1 PFAM: protein of unknown function DUF419; KEGG: dal:Dalk_4246 protein of unknown function DUF419; hypothetical protein 2374096 8358097 Cpin_1946 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121643.1 2373746 R 485918 CDS YP_003121644.1 256420991 8358098 complement(2374229..2374747) 1 NC_013132.1 hypothetical protein 2374747 8358098 Cpin_1947 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121644.1 2374229 R 485918 CDS YP_003121645.1 256420992 8358099 2375001..2376365 1 NC_013132.1 KEGG: bpy:Bphyt_1074 abortive phage resistance protein-like protein; abortive phage resistance protein-like protein 2376365 8358099 Cpin_1948 Chitinophaga pinensis DSM 2588 abortive phage resistance protein-like protein YP_003121645.1 2375001 D 485918 CDS YP_003121646.1 256420993 8358100 2376349..2377026 1 NC_013132.1 KEGG: sfu:Sfum_3792 abortive phage resistance protein-like; hypothetical protein 2377026 8358100 Cpin_1949 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121646.1 2376349 D 485918 CDS YP_003121647.1 256420994 8358101 complement(2377152..2380022) 1 NC_013132.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 2380022 8358101 Cpin_1950 Chitinophaga pinensis DSM 2588 glycine dehydrogenase YP_003121647.1 2377152 R 485918 CDS YP_003121648.1 256420995 8358102 2380384..2380878 1 NC_013132.1 PFAM: protein of unknown function UPF0153; KEGG: sus:Acid_3431 hypothetical protein; hypothetical protein 2380878 8358102 Cpin_1951 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121648.1 2380384 D 485918 CDS YP_003121649.1 256420996 8358103 complement(2380884..2382140) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: aci:ACIAD3048 transporter; major facilitator superfamily protein 2382140 8358103 Cpin_1952 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003121649.1 2380884 R 485918 CDS YP_003121650.1 256420997 8358104 2382445..2384580 1 NC_013132.1 KEGG: pca:Pcar_1658 carboxy-terminal protease for penicillin-binding protein 3; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 2384580 8358104 Cpin_1953 Chitinophaga pinensis DSM 2588 carboxyl-terminal protease YP_003121650.1 2382445 D 485918 CDS YP_003121651.1 256420998 8358105 complement(2384816..2385703) 1 NC_013132.1 KEGG: aba:Acid345_1339 hypothetical protein; hypothetical protein 2385703 8358105 Cpin_1954 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121651.1 2384816 R 485918 CDS YP_003121652.1 256420999 8358106 complement(2385727..2388081) 1 NC_013132.1 KEGG: tcx:Tcr_0196 DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase I 2388081 8358106 Cpin_1955 Chitinophaga pinensis DSM 2588 DNA topoisomerase I YP_003121652.1 2385727 R 485918 CDS YP_003121653.1 256421000 8358107 2388388..2389152 1 NC_013132.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; KEGG: abb:ABBFA_002383 NADP oxidoreductase coenzyme F420-dependent family protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 2389152 8358107 Cpin_1956 Chitinophaga pinensis DSM 2588 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_003121653.1 2388388 D 485918 CDS YP_003121654.1 256421001 8358108 2389291..2389812 1 NC_013132.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: dvl:Dvul_1509 3-deoxy-D-manno-octulosonate 8- phosphate phosphatase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 2389812 8358108 Cpin_1957 Chitinophaga pinensis DSM 2588 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_003121654.1 2389291 D 485918 CDS YP_003121655.1 256421002 8358109 2389868..2390809 1 NC_013132.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 2390809 ubiA 8358109 ubiA Chitinophaga pinensis DSM 2588 prenyltransferase YP_003121655.1 2389868 D 485918 CDS YP_003121656.1 256421003 8358110 2390809..2391387 1 NC_013132.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: bcy:Bcer98_3171 Maf-like protein; maf protein 2391387 8358110 Cpin_1959 Chitinophaga pinensis DSM 2588 maf protein YP_003121656.1 2390809 D 485918 CDS YP_003121657.1 256421004 8358111 complement(2391415..2391777) 1 NC_013132.1 PFAM: Domain of unknown function DUF1801; KEGG: gur:Gura_3522 hypothetical protein; hypothetical protein 2391777 8358111 Cpin_1960 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121657.1 2391415 R 485918 CDS YP_003121658.1 256421005 8358112 2391897..2393012 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 2393012 8358112 Cpin_1961 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121658.1 2391897 D 485918 CDS YP_003121659.1 256421006 8358113 complement(2393166..2394362) 1 NC_013132.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: nis:NIS_1553 homoserine dehydrogenase; homoserine dehydrogenase 2394362 8358113 Cpin_1962 Chitinophaga pinensis DSM 2588 homoserine dehydrogenase YP_003121659.1 2393166 R 485918 CDS YP_003121660.1 256421007 8358114 complement(2394512..2395690) 1 NC_013132.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: bcy:Bcer98_3084 cystathionine beta-lyase; cystathionine gamma-synthase 2395690 8358114 Cpin_1963 Chitinophaga pinensis DSM 2588 cystathionine gamma-synthase YP_003121660.1 2394512 R 485918 CDS YP_003121661.1 256421008 8358115 2396137..2397561 1 NC_013132.1 hypothetical protein 2397561 8358115 Cpin_1964 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121661.1 2396137 D 485918 CDS YP_003121662.1 256421009 8358116 2397792..2398604 1 NC_013132.1 hypothetical protein 2398604 8358116 Cpin_1965 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121662.1 2397792 D 485918 CDS YP_003121663.1 256421010 8358117 2398646..2399560 1 NC_013132.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2399560 8358117 Cpin_1966 Chitinophaga pinensis DSM 2588 lipoyl synthase YP_003121663.1 2398646 D 485918 CDS YP_003121664.1 256421011 8358118 2399891..2401222 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: sat:SYN_02462 type I secretion outer membrane protein; outer membrane efflux protein 2401222 8358118 Cpin_1967 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003121664.1 2399891 D 485918 CDS YP_003121665.1 256421012 8358119 2401279..2402418 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: vvy:VVA1079 membrane-fusion protein; RND family efflux transporter MFP subunit 2402418 8358119 Cpin_1968 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003121665.1 2401279 D 485918 CDS YP_003121666.1 256421013 8358120 2402455..2405625 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: noc:Noc_1130 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2405625 8358120 Cpin_1969 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003121666.1 2402455 D 485918 CDS YP_003121667.1 256421014 8358121 complement(2405704..2406117) 1 NC_013132.1 hypothetical protein 2406117 8358121 Cpin_1970 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121667.1 2405704 R 485918 CDS YP_003121668.1 256421015 8358122 complement(2406308..2408986) 1 NC_013132.1 PFAM: AsmA family protein; KEGG: rbo:A1I_02730 outer membrane assembly protein; AsmA family protein 2408986 8358122 Cpin_1971 Chitinophaga pinensis DSM 2588 AsmA family protein YP_003121668.1 2406308 R 485918 CDS YP_003121669.1 256421016 8358123 2409094..2409687 1 NC_013132.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dde:Dde_1484 tRNA (guanosine-2'-O-)- methyltransferase; tRNA/rRNA methyltransferase SpoU 2409687 8358123 Cpin_1972 Chitinophaga pinensis DSM 2588 tRNA/rRNA methyltransferase SpoU YP_003121669.1 2409094 D 485918 CDS YP_003121670.1 256421017 8358124 complement(2409767..2410675) 1 NC_013132.1 PFAM: NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: gbe:GbCGDNIH1_1778 hypothetical cytosolic protein; NmrA family protein 2410675 8358124 Cpin_1973 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003121670.1 2409767 R 485918 CDS YP_003121671.1 256421018 8358125 complement(2410797..2413205) 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP- cone domain protein; ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha 2413205 8358125 Cpin_1974 Chitinophaga pinensis DSM 2588 ribonucleoside-diphosphate reductase subunit alpha YP_003121671.1 2410797 R 485918 CDS YP_003121672.1 256421019 8358126 complement(2413296..2414267) 1 NC_013132.1 PFAM: ribonucleotide reductase; KEGG: RIR2A; ribonucleoside-diphosphate reductase small chain; K10808 ribonucleoside-diphosphate reductase subunit M2; ribonucleoside-diphosphate reductase 2414267 8358126 Cpin_1975 Chitinophaga pinensis DSM 2588 ribonucleoside-diphosphate reductase YP_003121672.1 2413296 R 485918 CDS YP_003121673.1 256421020 8358127 2414733..2415365 1 NC_013132.1 PFAM: ABC transporter related; KEGG: rfr:Rfer_3201 ABC transporter related; ABC transporter 2415365 8358127 Cpin_1976 Chitinophaga pinensis DSM 2588 ABC transporter YP_003121673.1 2414733 D 485918 CDS YP_003121674.1 256421021 8358128 2415376..2416482 1 NC_013132.1 hypothetical protein 2416482 8358128 Cpin_1977 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121674.1 2415376 D 485918 CDS YP_003121675.1 256421022 8358129 2416578..2417450 1 NC_013132.1 KEGG: bja:bll7458 hypothetical protein; hypothetical protein 2417450 8358129 Cpin_1978 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121675.1 2416578 D 485918 CDS YP_003121676.1 256421023 8358130 2417483..2418559 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_2175 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 2418559 8358130 Cpin_1979 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003121676.1 2417483 D 485918 CDS YP_003121677.1 256421024 8358131 2418685..2419536 1 NC_013132.1 hypothetical protein 2419536 8358131 Cpin_1980 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121677.1 2418685 D 485918 CDS YP_003121678.1 256421025 8358132 complement(2419541..2421094) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2421094 8358132 Cpin_1981 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121678.1 2419541 R 485918 CDS YP_003121679.1 256421026 8358133 2421312..2422709 1 NC_013132.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2422709 8358133 Cpin_1982 Chitinophaga pinensis DSM 2588 isopropylmalate isomerase large subunit YP_003121679.1 2421312 D 485918 CDS YP_003121680.1 256421027 8358134 2422722..2423480 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase small; methyltransferase type 12; KEGG: bha:BH2887 hypothetical protein; type 11 methyltransferase 2423480 8358134 Cpin_1983 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003121680.1 2422722 D 485918 CDS YP_003121681.1 256421028 8358135 2423520..2424119 1 NC_013132.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: kpe:KPK_4665 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 2424119 8358135 Cpin_1984 Chitinophaga pinensis DSM 2588 3-isopropylmalate dehydratase small subunit YP_003121681.1 2423520 D 485918 CDS YP_003121682.1 256421029 8358136 2424217..2425296 1 NC_013132.1 KEGG: nis:NIS_0727 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2425296 8358136 Cpin_1985 Chitinophaga pinensis DSM 2588 3-isopropylmalate dehydrogenase YP_003121682.1 2424217 D 485918 CDS YP_003121683.1 256421030 8358137 2425357..2426868 1 NC_013132.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2426868 8358137 Cpin_1986 Chitinophaga pinensis DSM 2588 2-isopropylmalate synthase YP_003121683.1 2425357 D 485918 CDS YP_003121684.1 256421031 8358138 complement(2426915..2427634) 1 NC_013132.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mxa:MXAN_6416 D-alanyl-D-alanine dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 2427634 8358138 Cpin_1987 Chitinophaga pinensis DSM 2588 peptidase M15D vanX D-ala-D-ala dipeptidase YP_003121684.1 2426915 R 485918 CDS YP_003121685.1 256421032 8358139 2427750..2428532 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aba:Acid345_0642 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2428532 8358139 Cpin_1988 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003121685.1 2427750 D 485918 CDS YP_003121686.1 256421033 8358140 2428624..2429370 1 NC_013132.1 hypothetical protein 2429370 8358140 Cpin_1989 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121686.1 2428624 D 485918 CDS YP_003121687.1 256421034 8358141 2429422..2430273 1 NC_013132.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mlo:mll4780 2-hydroxyhepta-2,4-diene-1,7- dioate isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2430273 8358141 Cpin_1990 Chitinophaga pinensis DSM 2588 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_003121687.1 2429422 D 485918 CDS YP_003121688.1 256421035 8358142 2430434..2430766 1 NC_013132.1 PFAM: protein of unknown function DUF718; KEGG: spe:Spro_0643 hypothetical protein; hypothetical protein 2430766 8358142 Cpin_1991 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121688.1 2430434 D 485918 CDS YP_003121689.1 256421036 8358143 2430836..2431663 1 NC_013132.1 PFAM: amidohydrolase 2; KEGG: pat:Patl_0798 amidohydrolase 2; amidohydrolase 2 2431663 8358143 Cpin_1992 Chitinophaga pinensis DSM 2588 amidohydrolase 2 YP_003121689.1 2430836 D 485918 CDS YP_003121690.1 256421037 8358144 2431700..2432482 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_3383 short chain dehydrogenase; short chain dehydrogenase 2432482 8358144 Cpin_1993 Chitinophaga pinensis DSM 2588 short chain dehydrogenase YP_003121690.1 2431700 D 485918 CDS YP_003121691.1 256421038 8358145 2432519..2433817 1 NC_013132.1 TIGRFAM: L-fucose transporter; glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: nar:Saro_2428 L-fucose permease; L-fucose transporter 2433817 8358145 Cpin_1994 Chitinophaga pinensis DSM 2588 L-fucose transporter YP_003121691.1 2432519 D 485918 CDS YP_003121692.1 256421039 8358147 complement(2434015..2434593) 1 NC_013132.1 PFAM: O-methyltransferase family 3; KEGG: scl:sce1553 O-methyltransferase family protein; O-methyltransferase family protein 2434593 8358147 Cpin_1996 Chitinophaga pinensis DSM 2588 O-methyltransferase family protein YP_003121692.1 2434015 R 485918 CDS YP_003121693.1 256421040 8358148 2434656..2435381 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2435381 8358148 Cpin_1997 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121693.1 2434656 D 485918 CDS YP_003121694.1 256421041 8358149 2435388..2436446 1 NC_013132.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: scl:sce3211 hypothetical protein; cytochrome C peroxidase 2436446 8358149 Cpin_1998 Chitinophaga pinensis DSM 2588 cytochrome C peroxidase YP_003121694.1 2435388 D 485918 CDS YP_003121695.1 256421042 8358150 complement(2436450..2438666) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2438666 8358150 Cpin_1999 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121695.1 2436450 R 485918 CDS YP_003121696.1 256421043 8358151 complement(2438688..2440523) 1 NC_013132.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: ppd:Ppro_0093 glucosamine--fructose-6- phosphate aminotransferase, isomerizing; glucosamine/fructose-6-phosphate aminotransferase 2440523 8358151 Cpin_2000 Chitinophaga pinensis DSM 2588 glucosamine/fructose-6-phosphate aminotransferase YP_003121696.1 2438688 R 485918 CDS YP_003121697.1 256421044 8358152 2440757..2441281 1 NC_013132.1 KEGG: sfr:Sfri_2302 phosphohistidine phosphatase, SixA; hypothetical protein 2441281 8358152 Cpin_2001 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121697.1 2440757 D 485918 CDS YP_003121698.1 256421045 8358153 complement(2441479..2442855) 1 NC_013132.1 TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; KEGG: mxa:MXAN_0378 magnesium transporter; magnesium transporter 2442855 8358153 Cpin_2002 Chitinophaga pinensis DSM 2588 magnesium transporter YP_003121698.1 2441479 R 485918 CDS YP_003121699.1 256421046 8358154 complement(2442905..2443774) 1 NC_013132.1 PFAM: protein of unknown function UPF0187; KEGG: mca:MCA3057 hypothetical protein; hypothetical protein 2443774 8358154 Cpin_2003 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121699.1 2442905 R 485918 CDS YP_003121700.1 256421047 8358155 2443871..2444260 1 NC_013132.1 SMART: nuclear protein SET; KEGG: bcb:BCB4264_A5217 SET domain protein; nuclear protein SET 2444260 8358155 Cpin_2004 Chitinophaga pinensis DSM 2588 nuclear protein SET YP_003121700.1 2443871 D 485918 CDS YP_003121701.1 256421048 8358156 2444363..2444848 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mmw:Mmwyl1_2106 GCN5-related N- acetyltransferase; MarR family transcriptional regulator 2444848 8358156 Cpin_2005 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003121701.1 2444363 D 485918 CDS YP_003121702.1 256421049 8358157 2444871..2446439 1 NC_013132.1 KEGG: saz:Sama_1631 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 2446439 8358157 Cpin_2006 Chitinophaga pinensis DSM 2588 histidine ammonia-lyase YP_003121702.1 2444871 D 485918 CDS YP_003121703.1 256421050 8358158 2446417..2448081 1 NC_013132.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 2448081 8358158 Cpin_2007 Chitinophaga pinensis DSM 2588 urocanate hydratase YP_003121703.1 2446417 D 485918 CDS YP_003121704.1 256421051 8358159 2448085..2449311 1 NC_013132.1 KEGG: bba:Bd2721 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; amidohydrolase; imidazolonepropionase 2449311 8358159 Cpin_2008 Chitinophaga pinensis DSM 2588 imidazolonepropionase YP_003121704.1 2448085 D 485918 CDS YP_003121705.1 256421052 8358160 complement(2449519..2451765) 1 NC_013132.1 PFAM: glycoside hydrolase family 5; coagulation factor 5/8 type domain protein; KEGG: bsu:BSU18130 endo-1,4-beta-glucanase; cellulase 2451765 8358160 Cpin_2009 Chitinophaga pinensis DSM 2588 cellulase YP_003121705.1 2449519 R 485918 CDS YP_003121706.1 256421053 8358161 2452180..2453181 1 NC_013132.1 TIGRFAM: formiminoglutamase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: aha:AHA_0378 formimidoylglutamase; formiminoglutamase 2453181 8358161 Cpin_2010 Chitinophaga pinensis DSM 2588 formiminoglutamase YP_003121706.1 2452180 D 485918 CDS YP_003121707.1 256421054 8358162 2453319..2453918 1 NC_013132.1 hypothetical protein 2453918 8358162 Cpin_2011 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121707.1 2453319 D 485918 CDS YP_003121708.1 256421055 8358163 complement(2454163..2455026) 1 NC_013132.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2455026 purU 8358163 purU Chitinophaga pinensis DSM 2588 formyltetrahydrofolate deformylase YP_003121708.1 2454163 R 485918 CDS YP_003121709.1 256421056 8358164 2455095..2455586 1 NC_013132.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: bph:Bphy_1492 phosphodiesterase; phosphodiesterase 2455586 8358164 Cpin_2013 Chitinophaga pinensis DSM 2588 phosphodiesterase YP_003121709.1 2455095 D 485918 CDS YP_003121710.1 256421057 8358165 2455623..2456732 1 NC_013132.1 TIGRFAM: outer membrane insertion C-terminal signal; outer membrane insertion C-terminal signal 2456732 8358165 Cpin_2014 Chitinophaga pinensis DSM 2588 outer membrane insertion C-terminal signal YP_003121710.1 2455623 D 485918 CDS YP_003121711.1 256421058 8358166 complement(2456739..2457368) 1 NC_013132.1 KEGG: mlo:mll0172 hypothetical protein; hypothetical protein 2457368 8358166 Cpin_2015 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121711.1 2456739 R 485918 CDS YP_003121712.1 256421059 8358167 complement(2457440..2459713) 1 NC_013132.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2459713 8358167 Cpin_2016 Chitinophaga pinensis DSM 2588 aconitate hydratase YP_003121712.1 2457440 R 485918 CDS YP_003121713.1 256421060 8358168 2459943..2460164 1 NC_013132.1 hypothetical protein 2460164 8358168 Cpin_2017 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121713.1 2459943 D 485918 CDS YP_003121714.1 256421061 8358169 2460767..2461564 1 NC_013132.1 KEGG: acp:A2cp1_1816 hypothetical protein; hypothetical protein 2461564 8358169 Cpin_2018 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121714.1 2460767 D 485918 CDS YP_003121715.1 256421062 8358170 complement(2461646..2462050) 1 NC_013132.1 hypothetical protein 2462050 8358170 Cpin_2019 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121715.1 2461646 R 485918 CDS YP_003121716.1 256421063 8358171 complement(2462232..2463056) 1 NC_013132.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2463056 8358171 Cpin_2020 Chitinophaga pinensis DSM 2588 2-dehydro-3-deoxyphosphooctonate aldolase YP_003121716.1 2462232 R 485918 CDS YP_003121717.1 256421064 8358172 2463311..2464255 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rso:RS02291 oxidoreductase protein; NAD-dependent epimerase/dehydratase 2464255 8358172 Cpin_2021 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003121717.1 2463311 D 485918 CDS YP_003121718.1 256421065 8358173 2464303..2465151 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gdi:GDI1376 AraC family transcriptional regulator; AraC family transcriptional regulator 2465151 8358173 Cpin_2022 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121718.1 2464303 D 485918 CDS YP_003121719.1 256421066 8358174 2465228..2466241 1 NC_013132.1 PFAM: peptidase S41; SMART: peptidase S41; KEGG: mmr:Mmar10_0061 peptidase S41; peptidase S41 2466241 8358174 Cpin_2023 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003121719.1 2465228 D 485918 CDS YP_003121720.1 256421067 8358175 complement(2466310..2467557) 1 NC_013132.1 KEGG: noc:Noc_2288 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase 2467557 8358175 Cpin_2024 Chitinophaga pinensis DSM 2588 sulfate adenylyltransferase YP_003121720.1 2466310 R 485918 CDS YP_003121721.1 256421068 8358176 complement(2467642..2468550) 1 NC_013132.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase 2468550 8358176 Cpin_2025 Chitinophaga pinensis DSM 2588 sulfate adenylyltransferase YP_003121721.1 2467642 R 485918 CDS YP_003121722.1 256421069 8358177 complement(2468625..2469308) 1 NC_013132.1 KEGG: abu:Abu_2173 phosphoadenosine phosphosulfate reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase 2469308 8358177 Cpin_2026 Chitinophaga pinensis DSM 2588 adenylylsulfate reductase YP_003121722.1 2468625 R 485918 CDS YP_003121723.1 256421070 8358178 complement(2469724..2470152) 1 NC_013132.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 2470152 8358178 Cpin_2027 Chitinophaga pinensis DSM 2588 BadM/Rrf2 family transcriptional regulator YP_003121723.1 2469724 R 485918 CDS YP_003121724.1 256421071 8358179 complement(2470210..2470926) 1 NC_013132.1 KEGG: sus:Acid_6981 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 2470926 8358179 Cpin_2028 Chitinophaga pinensis DSM 2588 dihydrodipicolinate reductase YP_003121724.1 2470210 R 485918 CDS YP_003121725.1 256421072 8358180 complement(2470955..2471572) 1 NC_013132.1 hypothetical protein 2471572 8358180 Cpin_2029 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121725.1 2470955 R 485918 CDS YP_003121726.1 256421073 8358181 complement(2471646..2472581) 1 NC_013132.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 2472581 8358181 Cpin_2030 Chitinophaga pinensis DSM 2588 parB-like partition protein YP_003121726.1 2471646 R 485918 CDS YP_003121727.1 256421074 8358182 complement(2472565..2473386) 1 NC_013132.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bha:BH4058 centromere-like function involved in forespore chromosome partition; cobyrinic acid ac-diamide synthase 2473386 8358182 Cpin_2031 Chitinophaga pinensis DSM 2588 cobyrinic acid ac-diamide synthase YP_003121727.1 2472565 R 485918 CDS YP_003121728.1 256421075 8358183 complement(2473486..2474166) 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: bcr:BCAH187_A4741 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 2474166 8358183 Cpin_2032 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003121728.1 2473486 R 485918 CDS YP_003121729.1 256421076 8358184 2474460..2475722 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: mxa:MXAN_0888 Ser/Thr protein phosphatase family protein; metallophosphoesterase 2475722 8358184 Cpin_2033 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003121729.1 2474460 D 485918 CDS YP_003121730.1 256421077 8358185 2475848..2476804 1 NC_013132.1 hypothetical protein 2476804 8358185 Cpin_2034 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121730.1 2475848 D 485918 CDS YP_003121731.1 256421078 8358186 2476996..2477613 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2477613 8358186 Cpin_2035 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121731.1 2476996 D 485918 CDS YP_003121732.1 256421079 8358187 2477788..2480190 1 NC_013132.1 KEGG: afw:Anae109_2098 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La 2480190 8358187 Cpin_2036 Chitinophaga pinensis DSM 2588 ATP-dependent protease La YP_003121732.1 2477788 D 485918 CDS YP_003121733.1 256421080 8358188 2480324..2481376 1 NC_013132.1 hypothetical protein 2481376 8358188 Cpin_2037 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121733.1 2480324 D 485918 CDS YP_003121734.1 256421081 8358189 complement(2481439..2482176) 1 NC_013132.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2482176 8358189 Cpin_2038 Chitinophaga pinensis DSM 2588 pyridoxine 5'-phosphate synthase YP_003121734.1 2481439 R 485918 CDS YP_003121735.1 256421082 8358190 complement(2482299..2483627) 1 NC_013132.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 2483627 8358190 Cpin_2039 Chitinophaga pinensis DSM 2588 S-adenosyl-L-homocysteine hydrolase YP_003121735.1 2482299 R 485918 CDS YP_003121736.1 256421083 8358191 2484116..2490184 1 NC_013132.1 KEGG: azc:AZC_1301 endoglucanase; hypothetical protein 2490184 8358191 Cpin_2040 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121736.1 2484116 D 485918 CDS YP_003121737.1 256421084 8358192 2490187..2491098 1 NC_013132.1 hypothetical protein 2491098 8358192 Cpin_2041 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121737.1 2490187 D 485918 CDS YP_003121738.1 256421085 8358193 complement(2491393..2491896) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: GNAT family acetyltransferase; N-acetyltransferase GCN5 2491896 8358193 Cpin_2042 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003121738.1 2491393 R 485918 CDS YP_003121739.1 256421086 8358194 complement(2492074..2492700) 1 NC_013132.1 KEGG: bcb:BCB4264_A0950 thioredoxin; thioredoxin 2492700 8358194 Cpin_2043 Chitinophaga pinensis DSM 2588 thioredoxin YP_003121739.1 2492074 R 485918 CDS YP_003121740.1 256421087 8358195 complement(2492735..2494408) 1 NC_013132.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase X; KEGG: bja:blr8027 DNA polymerase beta family protein; PHP domain-containing protein 2494408 8358195 Cpin_2044 Chitinophaga pinensis DSM 2588 PHP domain-containing protein YP_003121740.1 2492735 R 485918 CDS YP_003121741.1 256421088 8358196 complement(2494513..2494971) 1 NC_013132.1 KEGG: bpy:Bphyt_3433 histone H1-like protein; histone H1-like protein 2494971 8358196 Cpin_2045 Chitinophaga pinensis DSM 2588 histone H1-like protein YP_003121741.1 2494513 R 485918 CDS YP_003121742.1 256421089 8358197 complement(2495045..2495317) 1 NC_013132.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: rsh:Rsph17029_3512 50S ribosomal protein L27; 50S ribosomal protein L27 2495317 8358197 Cpin_2046 Chitinophaga pinensis DSM 2588 50S ribosomal protein L27 YP_003121742.1 2495045 R 485918 CDS YP_003121743.1 256421090 8358198 complement(2495355..2495657) 1 NC_013132.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: rty:RT0736 50S ribosomal protein L21; 50S ribosomal protein L21 2495657 8358198 Cpin_2047 Chitinophaga pinensis DSM 2588 50S ribosomal protein L21 YP_003121743.1 2495355 R 485918 CDS YP_003121744.1 256421091 8358199 2495970..2497463 1 NC_013132.1 PFAM: GH3 auxin-responsive promoter; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein; GH3 auxin-responsive promoter 2497463 8358199 Cpin_2048 Chitinophaga pinensis DSM 2588 GH3 auxin-responsive promoter YP_003121744.1 2495970 D 485918 CDS YP_003121745.1 256421092 8358200 2497575..2498741 1 NC_013132.1 KEGG: mag:amb2492 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2498741 8358200 Cpin_2049 Chitinophaga pinensis DSM 2588 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003121745.1 2497575 D 485918 CDS YP_003121746.1 256421093 8358201 2498837..2500171 1 NC_013132.1 PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: cak:Caul_2798 membrane-associated zinc metalloprotease; peptidase M50 2500171 8358201 Cpin_2050 Chitinophaga pinensis DSM 2588 peptidase M50 YP_003121746.1 2498837 D 485918 CDS YP_003121747.1 256421094 8358203 2501161..2501538 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: amc:MADE_01275 two-component sensor histidine kinase; histidine kinase 2501538 8358203 Cpin_2051 Chitinophaga pinensis DSM 2588 histidine kinase YP_003121747.1 2501161 D 485918 CDS YP_003121748.1 256421095 8358204 complement(2501649..2504081) 1 NC_013132.1 PFAM: mechanosensitive ion channel MscS; KEGG: aba:Acid345_0914 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2504081 8358204 Cpin_2052 Chitinophaga pinensis DSM 2588 mechanosensitive ion channel protein MscS YP_003121748.1 2501649 R 485918 CDS YP_003121749.1 256421096 8358205 2504180..2505010 1 NC_013132.1 hypothetical protein 2505010 8358205 Cpin_2053 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121749.1 2504180 D 485918 CDS YP_003121750.1 256421097 8358206 2505022..2505432 1 NC_013132.1 hypothetical protein 2505432 8358206 Cpin_2054 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121750.1 2505022 D 485918 CDS YP_003121751.1 256421098 8358207 2505474..2506454 1 NC_013132.1 hypothetical protein 2506454 8358207 Cpin_2055 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121751.1 2505474 D 485918 CDS YP_003121752.1 256421099 8358208 2506454..2507803 1 NC_013132.1 KEGG: mxa:MXAN_4007 hypothetical protein; hypothetical protein 2507803 8358208 Cpin_2056 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121752.1 2506454 D 485918 CDS YP_003121753.1 256421100 8358209 complement(2508262..2509527) 1 NC_013132.1 PFAM: HipA domain protein; KEGG: hch:HCH_01139 uncharacterized protein related to capsule biosynthesis enzyme; HipA domain-containing protein 2509527 8358209 Cpin_2057 Chitinophaga pinensis DSM 2588 HipA domain-containing protein YP_003121753.1 2508262 R 485918 CDS YP_003121754.1 256421101 8358210 complement(2509517..2509855) 1 NC_013132.1 SMART: helix-turn-helix domain protein; KEGG: hch:HCH_01138 transcriptional regulator; XRE family transcriptional regulator 2509855 8358210 Cpin_2058 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003121754.1 2509517 R 485918 CDS YP_003121755.1 256421102 8358212 complement(2510201..2510923) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 2510923 8358212 Cpin_2060 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003121755.1 2510201 R 485918 CDS YP_003121756.1 256421103 8358213 complement(2510920..2511972) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sde:Sde_3001 DEAD/DEAH box helicase-like; signal transduction histidine kinase LytS 2511972 8358213 Cpin_2061 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003121756.1 2510920 R 485918 CDS YP_003121757.1 256421104 8358214 2512408..2514783 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor 2514783 8358214 Cpin_2062 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003121757.1 2512408 D 485918 CDS YP_003121758.1 256421105 8358215 2514815..2515636 1 NC_013132.1 hypothetical protein 2515636 8358215 Cpin_2063 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121758.1 2514815 D 485918 CDS YP_003121759.1 256421106 8358217 complement(2515916..2516662) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL2358 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 2516662 8358217 Cpin_2065 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003121759.1 2515916 R 485918 CDS YP_003121760.1 256421107 8358218 complement(2516763..2517404) 1 NC_013132.1 PFAM: nitroreductase; KEGG: bba:Bd1162 hypothetical protein; nitroreductase 2517404 8358218 Cpin_2066 Chitinophaga pinensis DSM 2588 nitroreductase YP_003121760.1 2516763 R 485918 CDS YP_003121761.1 256421108 8358219 2517520..2517945 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: sme:SMc02225 hypothetical protein; HxlR family transcriptional regulator 2517945 8358219 Cpin_2067 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003121761.1 2517520 D 485918 CDS YP_003121762.1 256421109 8358220 2518181..2519452 1 NC_013132.1 hypothetical protein 2519452 8358220 Cpin_2068 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121762.1 2518181 D 485918 CDS YP_003121763.1 256421110 8358221 2519449..2520750 1 NC_013132.1 KEGG: rde:RD1_A0036 hypothetical protein; hypothetical protein 2520750 8358221 Cpin_2069 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121763.1 2519449 D 485918 CDS YP_003121764.1 256421111 8358222 2520747..2522873 1 NC_013132.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: rpe:RPE_2448 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 2522873 8358222 Cpin_2070 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003121764.1 2520747 D 485918 CDS YP_003121765.1 256421112 8358223 2522960..2523559 1 NC_013132.1 hypothetical protein 2523559 8358223 Cpin_2071 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121765.1 2522960 D 485918 CDS YP_003121766.1 256421113 8358224 complement(2523780..2526281) 1 NC_013132.1 hypothetical protein 2526281 8358224 Cpin_2072 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121766.1 2523780 R 485918 CDS YP_003121767.1 256421114 8358225 2526496..2527026 1 NC_013132.1 hypothetical protein 2527026 8358225 Cpin_2073 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121767.1 2526496 D 485918 CDS YP_003121768.1 256421115 8358226 complement(2527164..2529965) 1 NC_013132.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2529965 8358226 Cpin_2074 Chitinophaga pinensis DSM 2588 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_003121768.1 2527164 R 485918 CDS YP_003121769.1 256421116 8358227 2531015..2534404 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 2534404 8358227 Cpin_2075 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121769.1 2531015 D 485918 CDS YP_003121770.1 256421117 8358228 2534434..2539656 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 2539656 8358228 Cpin_2076 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121770.1 2534434 D 485918 CDS YP_003121771.1 256421118 8358229 2539681..2540634 1 NC_013132.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: similar to kyphoscoliosis peptidase; transglutaminase 2540634 8358229 Cpin_2077 Chitinophaga pinensis DSM 2588 transglutaminase YP_003121771.1 2539681 D 485918 CDS YP_003121772.1 256421119 8358230 2541089..2541700 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rpt:Rpal_0551 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 2541700 8358230 Cpin_2078 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121772.1 2541089 D 485918 CDS YP_003121773.1 256421120 8358231 2541780..2542925 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1453 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 2542925 8358231 Cpin_2079 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121773.1 2541780 D 485918 CDS YP_003121774.1 256421121 8358232 2543046..2546522 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 2546522 8358232 Cpin_2080 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003121774.1 2543046 D 485918 CDS YP_003121775.1 256421122 8358233 2546552..2548054 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2548054 8358233 Cpin_2081 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121775.1 2546552 D 485918 CDS YP_003121776.1 256421123 8358234 2548066..2549208 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 2549208 8358234 Cpin_2082 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121776.1 2548066 D 485918 CDS YP_003121777.1 256421124 8358235 complement(2549336..2549863) 1 NC_013132.1 hypothetical protein 2549863 8358235 Cpin_2083 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121777.1 2549336 R 485918 CDS YP_003121778.1 256421125 8358236 complement(2550049..2550657) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver protein 2550657 8358236 Cpin_2084 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121778.1 2550049 R 485918 CDS YP_003121779.1 256421126 8358237 complement(2550952..2552325) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: gur:Gura_4192 two component, sigma-54 specific, fis family transcriptional regulator; Fis family transcriptional regulator 2552325 8358237 Cpin_2085 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003121779.1 2550952 R 485918 CDS YP_003121780.1 256421127 8358238 complement(2552357..2554627) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: gur:Gura_2118 signal transduction histidine kinase; signal transduction histidine kinase 2554627 8358238 Cpin_2086 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003121780.1 2552357 R 485918 CDS YP_003121781.1 256421128 8358239 2554793..2556475 1 NC_013132.1 PFAM: aldehyde dehydrogenase; KEGG: bpy:Bphyt_7193 aldehyde dehydrogenase; aldehyde dehydrogenase 2556475 8358239 Cpin_2087 Chitinophaga pinensis DSM 2588 aldehyde dehydrogenase YP_003121781.1 2554793 D 485918 CDS YP_003121782.1 256421129 8358240 2556673..2557182 1 NC_013132.1 KEGG: jan:Jann_0775 signal peptide and transmembrane prediction; signal peptide 2557182 8358240 Cpin_2088 Chitinophaga pinensis DSM 2588 signal peptide YP_003121782.1 2556673 D 485918 CDS YP_003121783.1 256421130 8358241 complement(2557258..2557599) 1 NC_013132.1 PFAM: HopJ type III effector protein; KEGG: aci:ACIAD0424 type III effector HopPmaJ; HopJ type III effector protein 2557599 8358241 Cpin_2089 Chitinophaga pinensis DSM 2588 HopJ type III effector protein YP_003121783.1 2557258 R 485918 CDS YP_003121784.1 256421131 8358242 complement(2557678..2561349) 1 NC_013132.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 2561349 8358242 Cpin_2090 Chitinophaga pinensis DSM 2588 phosphoribosylformylglycinamidine synthase YP_003121784.1 2557678 R 485918 CDS YP_003121785.1 256421132 8358243 complement(2561794..2563722) 1 NC_013132.1 KEGG: bcj:BCAL2499 hypothetical protein; hypothetical protein 2563722 8358243 Cpin_2091 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121785.1 2561794 R 485918 CDS YP_003121786.1 256421133 8358244 2564102..2565007 1 NC_013132.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: aba:Acid345_3897 NmrA-like; NmrA family protein 2565007 8358244 Cpin_2092 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003121786.1 2564102 D 485918 CDS YP_003121787.1 256421134 8358245 2565115..2566035 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 2566035 8358245 Cpin_2093 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121787.1 2565115 D 485918 CDS YP_003121788.1 256421135 8358246 complement(2566158..2567282) 1 NC_013132.1 PFAM: FecR protein; KEGG: ppf:Pput_2219 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 2567282 8358246 Cpin_2094 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121788.1 2566158 R 485918 CDS YP_003121789.1 256421136 8358247 complement(2567293..2567898) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: sus:Acid_0312 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 2567898 8358247 Cpin_2095 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121789.1 2567293 R 485918 CDS YP_003121790.1 256421137 8358248 2567970..2568065 1 NC_013132.1 hypothetical protein 2568065 8358248 Cpin_2096 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121790.1 2567970 D 485918 CDS YP_003121791.1 256421138 8358249 2568211..2571543 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2571543 8358249 Cpin_2097 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121791.1 2568211 D 485918 CDS YP_003121792.1 256421139 8358250 2571540..2572934 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2572934 8358250 Cpin_2098 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121792.1 2571540 D 485918 CDS YP_003121793.1 256421140 8358251 complement(2572971..2573216) 1 NC_013132.1 hypothetical protein 2573216 8358251 Cpin_2099 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121793.1 2572971 R 485918 CDS YP_003121794.1 256421141 8358252 complement(2573756..2574136) 1 NC_013132.1 PFAM: protein of unknown function DUF1696; KEGG: pna:Pnap_1530 protein of unknown function DUF1696; hypothetical protein 2574136 8358252 Cpin_2100 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121794.1 2573756 R 485918 CDS YP_003121795.1 256421142 8358253 2574313..2574771 1 NC_013132.1 hypothetical protein 2574771 8358253 Cpin_2101 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121795.1 2574313 D 485918 CDS YP_003121796.1 256421143 8358254 2574791..2576641 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; hypothetical protein; hypothetical protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: rle:pRL100407 two-component sensor histidine kinase transcriptional regulatory protein; histidine kinase 2576641 8358254 Cpin_2102 Chitinophaga pinensis DSM 2588 histidine kinase YP_003121796.1 2574791 D 485918 CDS YP_003121797.1 256421144 8358255 2576647..2577279 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: cps:CPS_1260 nitrate/nitrite DNA- binding response regulator; LuxR family transcriptional regulator 2577279 8358255 Cpin_2103 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003121797.1 2576647 D 485918 CDS YP_003121798.1 256421145 8358256 2577477..2578232 1 NC_013132.1 hypothetical protein 2578232 8358256 Cpin_2104 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121798.1 2577477 D 485918 CDS YP_003121799.1 256421146 8358257 complement(2578304..2579644) 1 NC_013132.1 KEGG: protein kinase; hypothetical protein 2579644 8358257 Cpin_2105 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121799.1 2578304 R 485918 CDS YP_003121800.1 256421147 8358258 2579734..2580837 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 2580837 8358258 Cpin_2106 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121800.1 2579734 D 485918 CDS YP_003121801.1 256421148 8358259 2581028..2581636 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pla:Plav_0951 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 2581636 8358259 Cpin_2107 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121801.1 2581028 D 485918 CDS YP_003121802.1 256421149 8358260 2581701..2582870 1 NC_013132.1 PFAM: FecR protein; KEGG: pzu:PHZ_c2395 transcriptional regulator; anti-FecI sigma factor FecR 2582870 8358260 Cpin_2108 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121802.1 2581701 D 485918 CDS YP_003121803.1 256421150 8358261 2583128..2586592 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 2586592 8358261 Cpin_2109 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003121803.1 2583128 D 485918 CDS YP_003121804.1 256421151 8358262 2586629..2588059 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2588059 8358262 Cpin_2110 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003121804.1 2586629 D 485918 CDS YP_003121805.1 256421152 8358263 2588070..2589242 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 2589242 8358263 Cpin_2111 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121805.1 2588070 D 485918 CDS YP_003121806.1 256421153 8358264 2589256..2590386 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 2590386 8358264 Cpin_2112 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121806.1 2589256 D 485918 CDS YP_003121807.1 256421154 8358265 2590394..2590489 1 NC_013132.1 hypothetical protein 2590489 8358265 Cpin_2113 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121807.1 2590394 D 485918 CDS YP_003121808.1 256421155 8358266 2590593..2592149 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: sus:Acid_2993 glycoside hydrolase family protein; glycoside hydrolase 2592149 8358266 Cpin_2114 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121808.1 2590593 D 485918 CDS YP_003121809.1 256421156 8358267 complement(2592190..2594976) 1 NC_013132.1 KEGG: mxa:MXAN_6961 PBS lyase heat-like repeat protein; hypothetical protein 2594976 8358267 Cpin_2115 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121809.1 2592190 R 485918 CDS YP_003121810.1 256421157 8358268 complement(2595027..2597192) 1 NC_013132.1 hypothetical protein 2597192 8358268 Cpin_2116 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121810.1 2595027 R 485918 CDS YP_003121811.1 256421158 8358269 complement(2597194..2598819) 1 NC_013132.1 hypothetical protein 2598819 8358269 Cpin_2117 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121811.1 2597194 R 485918 CDS YP_003121812.1 256421159 8358270 complement(2598857..2599051) 1 NC_013132.1 hypothetical protein 2599051 8358270 Cpin_2118 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121812.1 2598857 R 485918 CDS YP_003121813.1 256421160 8358271 complement(2599276..2601708) 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ent:Ent638_3442 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2601708 8358271 Cpin_2119 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003121813.1 2599276 R 485918 CDS YP_003121814.1 256421161 8358272 2602008..2603237 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: sun:SUN_0983 hypothetical protein; hypothetical protein 2603237 8358272 Cpin_2120 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121814.1 2602008 D 485918 CDS YP_003121815.1 256421162 8358273 2603349..2604473 1 NC_013132.1 KEGG: xca:xccb100_3123 membrane-anchored nucleotide- binding enzyme; hypothetical protein 2604473 8358273 Cpin_2121 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121815.1 2603349 D 485918 CDS YP_003121816.1 256421163 8358274 2604544..2604981 1 NC_013132.1 hypothetical protein 2604981 8358274 Cpin_2122 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121816.1 2604544 D 485918 CDS YP_003121817.1 256421164 8358275 complement(2604985..2605338) 1 NC_013132.1 KEGG: msl:Msil_0956 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 2605338 8358275 Cpin_2123 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003121817.1 2604985 R 485918 CDS YP_003121818.1 256421165 8358276 2605480..2606223 1 NC_013132.1 hypothetical protein 2606223 8358276 Cpin_2124 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121818.1 2605480 D 485918 CDS YP_003121819.1 256421166 8358277 2606631..2608106 1 NC_013132.1 PFAM: Ricin B lectin; glycoside hydrolase family 5; SMART: Ricin B lectin; KEGG: eca:ECA0852 exported plant proteoglycan hydrolase; Ricin B lectin 2608106 8358277 Cpin_2125 Chitinophaga pinensis DSM 2588 Ricin B lectin YP_003121819.1 2606631 D 485918 CDS YP_003121820.1 256421167 8358278 2608233..2611823 1 NC_013132.1 PFAM: GumN family protein; KEGG: mes:Meso_3402 GumN; GumN family protein 2611823 8358278 Cpin_2126 Chitinophaga pinensis DSM 2588 GumN family protein YP_003121820.1 2608233 D 485918 CDS YP_003121821.1 256421168 8358279 2611922..2613004 1 NC_013132.1 KEGG: mxa:MXAN_1648 hypothetical protein; hypothetical protein 2613004 8358279 Cpin_2127 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121821.1 2611922 D 485918 CDS YP_003121822.1 256421169 8358280 complement(2613230..2613436) 1 NC_013132.1 hypothetical protein 2613436 8358280 Cpin_2128 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121822.1 2613230 R 485918 CDS YP_003121823.1 256421170 8358281 2613477..2613650 1 NC_013132.1 hypothetical protein 2613650 8358281 Cpin_2129 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121823.1 2613477 D 485918 CDS YP_003121824.1 256421171 8358282 2613647..2614375 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: rle:RL2358 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 2614375 8358282 Cpin_2130 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003121824.1 2613647 D 485918 CDS YP_003121825.1 256421172 8358283 complement(2614640..2615293) 1 NC_013132.1 PFAM: protein of unknown function DUF1361; hypothetical protein 2615293 8358283 Cpin_2131 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121825.1 2614640 R 485918 CDS YP_003121826.1 256421173 8358284 complement(2615299..2616045) 1 NC_013132.1 hypothetical protein 2616045 8358284 Cpin_2132 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121826.1 2615299 R 485918 CDS YP_003121827.1 256421174 8358286 complement(2616743..2617102) 1 NC_013132.1 hypothetical protein 2617102 8358286 Cpin_2134 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121827.1 2616743 R 485918 CDS YP_003121828.1 256421175 8358287 complement(2617244..2617630) 1 NC_013132.1 hypothetical protein 2617630 8358287 Cpin_2135 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121828.1 2617244 R 485918 CDS YP_003121829.1 256421176 8358288 2617848..2619764 1 NC_013132.1 KEGG: aba:Acid345_4063 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; hypothetical protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; histidine kinase 2619764 8358288 Cpin_2136 Chitinophaga pinensis DSM 2588 histidine kinase YP_003121829.1 2617848 D 485918 CDS YP_003121830.1 256421177 8358289 2619754..2620389 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sus:Acid_1603 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 2620389 8358289 Cpin_2137 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003121830.1 2619754 D 485918 CDS YP_003121831.1 256421178 8358290 complement(2620391..2620981) 1 NC_013132.1 KEGG: ank:AnaeK_1868 peptidase zinc-dependent; Zn-dependent protease-like protein 2620981 8358290 Cpin_2138 Chitinophaga pinensis DSM 2588 Zn-dependent protease-like protein YP_003121831.1 2620391 R 485918 CDS YP_003121832.1 256421179 8358291 complement(2620965..2622035) 1 NC_013132.1 KEGG: aba:Acid345_1846 hypothetical protein; hypothetical protein 2622035 8358291 Cpin_2139 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121832.1 2620965 R 485918 CDS YP_003121833.1 256421180 8358292 2622063..2622620 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: sbl:Sbal_0690 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 2622620 8358292 Cpin_2140 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121833.1 2622063 D 485918 CDS YP_003121834.1 256421181 8358293 2622595..2623236 1 NC_013132.1 hypothetical protein 2623236 8358293 Cpin_2141 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121834.1 2622595 D 485918 CDS YP_003121835.1 256421182 8358294 2623244..2624347 1 NC_013132.1 hypothetical protein 2624347 8358294 Cpin_2142 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121835.1 2623244 D 485918 CDS YP_003121836.1 256421183 8358295 2624448..2625284 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_04392 hypothetical protein; AraC family transcriptional regulator 2625284 8358295 Cpin_2143 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121836.1 2624448 D 485918 CDS YP_003121837.1 256421184 8358296 2625356..2625763 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A2710 glyoxalase/bleomycin resistance protein, GloA-like; bleomycin resistance protein 2625763 8358296 Cpin_2144 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003121837.1 2625356 D 485918 CDS YP_003121838.1 256421185 8358297 2625825..2628164 1 NC_013132.1 hypothetical protein 2628164 8358297 Cpin_2145 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121838.1 2625825 D 485918 CDS YP_003121839.1 256421186 8358298 2628351..2629211 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pag:PLES_02451 transcriptional regulator; AraC family transcriptional regulator 2629211 8358298 Cpin_2146 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121839.1 2628351 D 485918 CDS YP_003121840.1 256421187 8358299 complement(2629284..2629991) 1 NC_013132.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bur:Bcep18194_C6909 peptidase M17, leucyl aminopeptidase-like; peptidase M17 leucyl aminopeptidase domain-containing protein 2629991 8358299 Cpin_2147 Chitinophaga pinensis DSM 2588 peptidase M17 leucyl aminopeptidase domain-containing protein YP_003121840.1 2629284 R 485918 CDS YP_003121841.1 256421188 8358300 complement(2629996..2631378) 1 NC_013132.1 KEGG: pla:Plav_2386 hypothetical protein; hypothetical protein 2631378 8358300 Cpin_2148 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121841.1 2629996 R 485918 CDS YP_003121842.1 256421189 8358301 complement(2631614..2632090) 1 NC_013132.1 PFAM: ferritin Dps family protein; KEGG: cvi:CV_4253 DNA-binding stress protein; ferritin Dps family protein 2632090 8358301 Cpin_2149 Chitinophaga pinensis DSM 2588 ferritin Dps family protein YP_003121842.1 2631614 R 485918 CDS YP_003121843.1 256421190 8358302 complement(2632351..2633412) 1 NC_013132.1 PFAM: aminotransferase class I and II; KEGG: smd:Smed_1974 transcriptional regulator, GntR family; GntR family transcriptional regulator 2633412 8358302 Cpin_2150 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003121843.1 2632351 R 485918 CDS YP_003121844.1 256421191 8358303 complement(2633486..2634652) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_15630 hypothetical protein; major facilitator superfamily protein 2634652 8358303 Cpin_2151 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003121844.1 2633486 R 485918 CDS YP_003121845.1 256421192 8358304 complement(2634660..2635343) 1 NC_013132.1 PFAM: haloacid dehalogenase; KEGG: ppr:PBPRA2135 hypothetical protein; haloacid dehalogenase 2635343 8358304 Cpin_2152 Chitinophaga pinensis DSM 2588 haloacid dehalogenase YP_003121845.1 2634660 R 485918 CDS YP_003121846.1 256421193 8358305 complement(2635356..2636378) 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; KEGG: eta:ETA_29000 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 2636378 8358305 Cpin_2153 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003121846.1 2635356 R 485918 CDS YP_003121847.1 256421194 8358306 complement(2636359..2637621) 1 NC_013132.1 PFAM: aminotransferase class-III; KEGG: plu:plu0473 hypothetical protein; class III aminotransferase 2637621 8358306 Cpin_2154 Chitinophaga pinensis DSM 2588 class III aminotransferase YP_003121847.1 2636359 R 485918 CDS YP_003121848.1 256421195 8358307 complement(2638160..2638672) 1 NC_013132.1 hypothetical protein 2638672 8358307 Cpin_2155 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121848.1 2638160 R 485918 CDS YP_003121849.1 256421196 8358308 complement(2638979..2639485) 1 NC_013132.1 hypothetical protein 2639485 8358308 Cpin_2156 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121849.1 2638979 R 485918 CDS YP_003121850.1 256421197 8358309 2639607..2640107 1 NC_013132.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: nha:Nham_1039 (2Fe-2S)-binding; (2Fe-2S)-binding domain-containing protein 2640107 8358309 Cpin_2157 Chitinophaga pinensis DSM 2588 (2Fe-2S)-binding domain-containing protein YP_003121850.1 2639607 D 485918 CDS YP_003121851.1 256421198 8358310 2640104..2641093 1 NC_013132.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: psp:PSPPH_4342 oxidoreductase, molybdopterin- binding subunit; FAD-binding molybdopterin dehydrogenase 2641093 8358310 Cpin_2158 Chitinophaga pinensis DSM 2588 FAD-binding molybdopterin dehydrogenase YP_003121851.1 2640104 D 485918 CDS YP_003121852.1 256421199 8358311 2641090..2643321 1 NC_013132.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: mno:Mnod_2924 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 2643321 8358311 Cpin_2159 Chitinophaga pinensis DSM 2588 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_003121852.1 2641090 D 485918 CDS YP_003121853.1 256421200 8358312 complement(2643398..2644132) 1 NC_013132.1 KEGG: gme:Gmet_1419 exopolyphosphatase / 5'- nucleotidase / 3'-nucleotidase; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 2644132 8358312 Cpin_2160 Chitinophaga pinensis DSM 2588 stationary-phase survival protein SurE YP_003121853.1 2643398 R 485918 CDS YP_003121854.1 256421201 8358313 2644187..2645086 1 NC_013132.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: bca:BCE_4976 BmrU protein; diacylglycerol kinase catalytic subunit 2645086 8358313 Cpin_2161 Chitinophaga pinensis DSM 2588 diacylglycerol kinase catalytic subunit YP_003121854.1 2644187 D 485918 CDS YP_003121855.1 256421202 8358314 2645154..2646137 1 NC_013132.1 PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vfm:VFMJ11_A1201 spermidine/putrescine import ATP-binding protein PotA; ABC transporter 2646137 8358314 Cpin_2162 Chitinophaga pinensis DSM 2588 ABC transporter YP_003121855.1 2645154 D 485918 CDS YP_003121856.1 256421203 8358315 2646168..2647724 1 NC_013132.1 KEGG: ppd:Ppro_3757 DNA helicase; DNA helicase 2647724 8358315 Cpin_2163 Chitinophaga pinensis DSM 2588 DNA helicase YP_003121856.1 2646168 D 485918 CDS YP_003121857.1 256421204 8358316 complement(2647728..2648150) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: scl:sce7813 hypothetical protein; response regulator receiver protein 2648150 8358316 Cpin_2164 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121857.1 2647728 R 485918 CDS YP_003121858.1 256421205 8358317 complement(2648152..2649621) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: scl:sce5100 two-component hybrid histidine kinase; histidine kinase 2649621 8358317 Cpin_2165 Chitinophaga pinensis DSM 2588 histidine kinase YP_003121858.1 2648152 R 485918 CDS YP_003121859.1 256421206 8358318 2650011..2650637 1 NC_013132.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mlo:mlr1925 oxidoreductase, iron-sulphur binding subunit; (2Fe-2S)-binding domain-containing protein 2650637 8358318 Cpin_2166 Chitinophaga pinensis DSM 2588 (2Fe-2S)-binding domain-containing protein YP_003121859.1 2650011 D 485918 CDS YP_003121860.1 256421207 8358319 2650634..2651623 1 NC_013132.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mpo:Mpop_0759 molybdopterin dehydrogenase FAD- binding; FAD-binding molybdopterin dehydrogenase 2651623 8358319 Cpin_2167 Chitinophaga pinensis DSM 2588 FAD-binding molybdopterin dehydrogenase YP_003121860.1 2650634 D 485918 CDS YP_003121861.1 256421208 8358320 2651642..2653813 1 NC_013132.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sme:SM_b21556 aldehyde or xanthine dehydrogenase protein; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 2653813 8358320 Cpin_2168 Chitinophaga pinensis DSM 2588 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_003121861.1 2651642 D 485918 CDS YP_003121862.1 256421209 8358321 2653915..2655720 1 NC_013132.1 KEGG: gbm:Gbem_0343 exodeoxyribonuclease V, alpha subunit; TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase; exodeoxyribonuclease V subunit alpha 2655720 8358321 Cpin_2169 Chitinophaga pinensis DSM 2588 exodeoxyribonuclease V subunit alpha YP_003121862.1 2653915 D 485918 CDS YP_003121863.1 256421210 8358322 2655737..2658928 1 NC_013132.1 KEGG: gur:Gura_0582 exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: exodeoxyribonuclease V RecC subunit; exodeoxyribonuclease V subunit gamma 2658928 8358322 Cpin_2170 Chitinophaga pinensis DSM 2588 exodeoxyribonuclease V subunit gamma YP_003121863.1 2655737 D 485918 CDS YP_003121864.1 256421211 8358323 2658945..2662403 1 NC_013132.1 PFAM: UvrD/REP helicase; KEGG: dal:Dalk_2848 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V 2662403 8358323 Cpin_2171 Chitinophaga pinensis DSM 2588 exodeoxyribonuclease V YP_003121864.1 2658945 D 485918 CDS YP_003121865.1 256421212 8358324 complement(2662386..2663291) 1 NC_013132.1 KEGG: bbr:BB0107 hypothetical protein; hypothetical protein 2663291 8358324 Cpin_2172 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121865.1 2662386 R 485918 CDS YP_003121866.1 256421213 8358325 complement(2663305..2665176) 1 NC_013132.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 2665176 8358325 Cpin_2173 Chitinophaga pinensis DSM 2588 3-oxoacyl-ACP synthase YP_003121866.1 2663305 R 485918 CDS YP_003121867.1 256421214 8358326 complement(2665290..2665997) 1 NC_013132.1 KEGG: msl:Msil_3906 UDP-glucuronosyl/UDP- glucosyltransferase; hypothetical protein 2665997 8358326 Cpin_2174 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121867.1 2665290 R 485918 CDS YP_003121868.1 256421215 8358327 2666220..2668544 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2668544 8358327 Cpin_2175 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121868.1 2666220 D 485918 CDS YP_003121869.1 256421216 8358328 2668625..2670091 1 NC_013132.1 converts 1,4-alpha-D-glucans to maltodextrin; alpha-amylase 2670091 8358328 Cpin_2176 Chitinophaga pinensis DSM 2588 alpha-amylase YP_003121869.1 2668625 D 485918 CDS YP_003121870.1 256421217 8358329 2670201..2671712 1 NC_013132.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: amc:MADE_01964 serine carboxypeptidase; peptidase S10 serine carboxypeptidase 2671712 8358329 Cpin_2177 Chitinophaga pinensis DSM 2588 peptidase S10 serine carboxypeptidase YP_003121870.1 2670201 D 485918 CDS YP_003121871.1 256421218 8358330 2671763..2672332 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 2672332 8358330 Cpin_2178 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003121871.1 2671763 D 485918 CDS YP_003121872.1 256421219 8358331 2672409..2672849 1 NC_013132.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: vvu:VV2_0174 hypothetical protein; alkylhydroperoxidase 2672849 8358331 Cpin_2179 Chitinophaga pinensis DSM 2588 alkylhydroperoxidase YP_003121872.1 2672409 D 485918 CDS YP_003121873.1 256421220 8358332 complement(2673572..2674240) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rpi:Rpic_2943 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2674240 8358332 Cpin_2180 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003121873.1 2673572 R 485918 CDS YP_003121874.1 256421221 8358333 2675582..2677381 1 NC_013132.1 TIGRFAM: conserved repeat domain protein; KEGG: dal:Dalk_0072 conserved repeat domain protein; hypothetical protein 2677381 8358333 Cpin_2181 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121874.1 2675582 D 485918 CDS YP_003121875.1 256421222 8358334 2677408..2678418 1 NC_013132.1 hypothetical protein 2678418 8358334 Cpin_2182 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121875.1 2677408 D 485918 CDS YP_003121876.1 256421223 8358335 2678445..2680781 1 NC_013132.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; OmpA/MotB domain-containing protein 2680781 8358335 Cpin_2183 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003121876.1 2678445 D 485918 CDS YP_003121877.1 256421224 8358336 2681099..2685187 1 NC_013132.1 KEGG: ppr:PBPRB0541 chitinase; PFAM: glycoside hydrolase family 18; carbohydrate- binding family V/XII; PKD domain containing protein; SMART: chitinase II; carbohydrate-binding protein; PKD domain containing protein; chitinase 2685187 8358336 Cpin_2184 Chitinophaga pinensis DSM 2588 chitinase YP_003121877.1 2681099 D 485918 CDS YP_003121878.1 256421225 8358337 2685387..2686838 1 NC_013132.1 SMART: beta and gamma crystallin; KEGG: mxa:MXAN_5269 S1D (lysyl endopeptidase) subfamily C-terminal domain protein; beta and gamma crystallin 2686838 8358337 Cpin_2185 Chitinophaga pinensis DSM 2588 beta and gamma crystallin YP_003121878.1 2685387 D 485918 CDS YP_003121879.1 256421226 8358338 2687008..2688618 1 NC_013132.1 PFAM: glycoside hydrolase family 18; carbohydrate-binding protein; SMART: chitinase II; cellulose binding type IV; KEGG: hch:HCH_03091 glycosyl hydrolase; glycoside hydrolase 2688618 8358338 Cpin_2186 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121879.1 2687008 D 485918 CDS YP_003121880.1 256421227 8358339 2688699..2689868 1 NC_013132.1 PFAM: carbohydrate-binding protein; glycoside hydrolase family 16; SMART: cellulose binding type IV; KEGG: cja:CJA_2759 beta glucanase, , glu16F; carbohydrate-binding protein 2689868 8358339 Cpin_2187 Chitinophaga pinensis DSM 2588 carbohydrate-binding protein YP_003121880.1 2688699 D 485918 CDS YP_003121881.1 256421228 8358340 2689910..2691988 1 NC_013132.1 PFAM: peptidase domain protein; SMART: beta and gamma crystallin; KEGG: sse:Ssed_3289 PKD repeat-containing protein; peptidase domain-containing protein 2691988 8358340 Cpin_2188 Chitinophaga pinensis DSM 2588 peptidase domain-containing protein YP_003121881.1 2689910 D 485918 CDS YP_003121882.1 256421229 8358341 2692276..2692860 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mlo:mll1224 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 2692860 8358341 Cpin_2189 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121882.1 2692276 D 485918 CDS YP_003121883.1 256421230 8358342 2693059..2694066 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 2694066 8358342 Cpin_2190 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121883.1 2693059 D 485918 CDS YP_003121884.1 256421231 8358343 2694371..2698030 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2698030 8358343 Cpin_2191 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121884.1 2694371 D 485918 CDS YP_003121885.1 256421232 8358344 2698042..2699496 1 NC_013132.1 hypothetical protein 2699496 8358344 Cpin_2192 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121885.1 2698042 D 485918 CDS YP_003121886.1 256421233 8358345 2699551..2700438 1 NC_013132.1 hypothetical protein 2700438 8358345 Cpin_2193 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121886.1 2699551 D 485918 CDS YP_003121887.1 256421234 8358346 2700472..2701755 1 NC_013132.1 hypothetical protein 2701755 8358346 Cpin_2194 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121887.1 2700472 D 485918 CDS YP_003121888.1 256421235 8358347 2701808..2710750 1 NC_013132.1 SMART: PKD domain containing protein; Parallel beta- helix repeat; KEGG: hypothetical protein; PKD domain-containing protein 2710750 8358347 Cpin_2195 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003121888.1 2701808 D 485918 CDS YP_003121889.1 256421236 8358348 2710767..2714936 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sil:SPO0571 PKD domain-containing protein; PKD domain-containing protein 2714936 8358348 Cpin_2196 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003121889.1 2710767 D 485918 CDS YP_003121890.1 256421237 8358349 2714958..2715965 1 NC_013132.1 hypothetical protein 2715965 8358349 Cpin_2197 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121890.1 2714958 D 485918 CDS YP_003121891.1 256421238 8358350 2716004..2717788 1 NC_013132.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: xop:PXO_02523 OmpA family outer membrane protein; OmpA/MotB domain-containing protein 2717788 8358350 Cpin_2198 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003121891.1 2716004 D 485918 CDS YP_003121892.1 256421239 8358351 2717821..2718852 1 NC_013132.1 hypothetical protein 2718852 8358351 Cpin_2199 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121892.1 2717821 D 485918 CDS YP_003121893.1 256421240 8358352 2718924..2719484 1 NC_013132.1 KEGG: ade:Adeh_3163 hypothetical protein; hypothetical protein 2719484 8358352 Cpin_2200 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121893.1 2718924 D 485918 CDS YP_003121894.1 256421241 8358353 2719593..2720174 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: smt:Smal_1610 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 2720174 8358353 Cpin_2201 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121894.1 2719593 D 485918 CDS YP_003121895.1 256421242 8358354 2720444..2723062 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2723062 8358354 Cpin_2202 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121895.1 2720444 D 485918 CDS YP_003121896.1 256421243 8358355 complement(2723144..2724217) 1 NC_013132.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 2724217 8358355 Cpin_2203 Chitinophaga pinensis DSM 2588 fructose-bisphosphate aldolase YP_003121896.1 2723144 R 485918 CDS YP_003121897.1 256421244 8358356 complement(2724242..2724529) 1 NC_013132.1 KEGG: pen:PSEEN2510 hypothetical protein; hypothetical protein 2724529 8358356 Cpin_2204 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121897.1 2724242 R 485918 CDS YP_003121898.1 256421245 8358357 complement(2724567..2725265) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; redoxin; KEGG: sus:Acid_2283 redoxin domain-containing protein; alkyl hydroperoxide reductase 2725265 8358357 Cpin_2205 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121898.1 2724567 R 485918 CDS YP_003121899.1 256421246 8358358 2725708..2726526 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: dvu:DVU0888 response regulator; signal transduction histidine kinase 2726526 8358358 Cpin_2206 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003121899.1 2725708 D 485918 CDS YP_003121900.1 256421247 8358359 2726540..2728501 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: cps:CPS_0274 sigma-54 dependent transcriptional regulator/sensory box protein; Fis family transcriptional regulator 2728501 8358359 Cpin_2207 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003121900.1 2726540 D 485918 CDS YP_003121901.1 256421248 8358360 complement(2728556..2729572) 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: nmu:Nmul_A1400 zinc-containing alcohol dehydrogenase superfamily protein; alcohol dehydrogenase zinc-binding domain-containing protein 2729572 8358360 Cpin_2208 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003121901.1 2728556 R 485918 CDS YP_003121902.1 256421249 8358361 complement(2729585..2730085) 1 NC_013132.1 PFAM: DinB family protein; KEGG: bsu:BSU26780 hypothetical protein; DinB family protein 2730085 8358361 Cpin_2209 Chitinophaga pinensis DSM 2588 DinB family protein YP_003121902.1 2729585 R 485918 CDS YP_003121903.1 256421250 8358362 complement(2730106..2730996) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1910 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2730996 8358362 Cpin_2210 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003121903.1 2730106 R 485918 CDS YP_003121904.1 256421251 8358363 2731241..2732122 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hap:HAPS_1638 transcriptional regulator, AraC family; AraC family transcriptional regulator 2732122 8358363 Cpin_2211 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121904.1 2731241 D 485918 CDS YP_003121905.1 256421252 8358364 2732204..2732935 1 NC_013132.1 KEGG: azc:AZC_1385 hypothetical protein; hypothetical protein 2732935 8358364 Cpin_2212 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121905.1 2732204 D 485918 CDS YP_003121906.1 256421253 8358365 2732953..2733795 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bid:Bind_1826 alpha/beta hydrolase; alpha/beta hydrolase 2733795 8358365 Cpin_2213 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003121906.1 2732953 D 485918 CDS YP_003121907.1 256421254 8358366 2734433..2734711 1 NC_013132.1 hypothetical protein 2734711 8358366 Cpin_2214 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121907.1 2734433 D 485918 CDS YP_003121908.1 256421255 8358367 2734653..2734997 1 NC_013132.1 PFAM: LytTr DNA-binding region; KEGG: xca:xccb100_2363 sensory transduction protein; response regulator receiver protein 2734997 8358367 Cpin_2215 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121908.1 2734653 D 485918 CDS YP_003121909.1 256421256 8358368 2735263..2736210 1 NC_013132.1 hypothetical protein 2736210 8358368 Cpin_2216 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121909.1 2735263 D 485918 CDS YP_003121910.1 256421257 8358369 complement(2736298..2736633) 1 NC_013132.1 hypothetical protein 2736633 8358369 Cpin_2217 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121910.1 2736298 R 485918 CDS YP_003121911.1 256421258 8358370 complement(2736752..2737108) 1 NC_013132.1 hypothetical protein 2737108 8358370 Cpin_2218 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121911.1 2736752 R 485918 CDS YP_003121912.1 256421259 8358372 complement(2737521..2738381) 1 NC_013132.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: bqu:BQ01840 protoporphyrinogen oxidase protein; HemK family modification methylase 2738381 8358372 Cpin_2220 Chitinophaga pinensis DSM 2588 HemK family modification methylase YP_003121912.1 2737521 R 485918 CDS YP_003121913.1 256421260 8358373 2738458..2739516 1 NC_013132.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: sat:SYN_00578 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5- amino-6-(5-phosphoribosylamino)uracil reductase; riboflavin biosynthesis protein RibD 2739516 8358373 Cpin_2221 Chitinophaga pinensis DSM 2588 riboflavin biosynthesis protein RibD YP_003121913.1 2738458 D 485918 CDS YP_003121914.1 256421261 8358374 2739513..2741153 1 NC_013132.1 KEGG: similar to myosin light chain kinase; K00907 myosin-light-chain kinase; hypothetical protein 2741153 8358374 Cpin_2222 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121914.1 2739513 D 485918 CDS YP_003121915.1 256421262 8358375 2741157..2741759 1 NC_013132.1 PFAM: protein of unknown function UPF0029; KEGG: nma:NMA0240 hypothetical protein NMA0240; hypothetical protein 2741759 8358375 Cpin_2223 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121915.1 2741157 D 485918 CDS YP_003121916.1 256421263 8358376 complement(2741894..2742790) 1 NC_013132.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: aba:Acid345_4328 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 2742790 8358376 Cpin_2224 Chitinophaga pinensis DSM 2588 3-hydroxybutyryl-CoA dehydrogenase YP_003121916.1 2741894 R 485918 CDS YP_003121917.1 256421264 8358377 complement(2742830..2743552) 1 NC_013132.1 hypothetical protein 2743552 8358377 Cpin_2225 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121917.1 2742830 R 485918 CDS YP_003121918.1 256421265 8358378 2743679..2744776 1 NC_013132.1 PFAM: protein of unknown function DUF59; KEGG: mxa:MXAN_3803 ATP-binding protein, Mrp/Nbp35 family; hypothetical protein 2744776 8358378 Cpin_2226 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121918.1 2743679 D 485918 CDS YP_003121919.1 256421266 8358379 complement(2744859..2746214) 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_6247 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 2746214 8358379 Cpin_2227 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003121919.1 2744859 R 485918 CDS YP_003121920.1 256421267 8358380 complement(2746236..2747099) 1 NC_013132.1 PFAM: xylose isomerase; KEGG: swi:Swit_1902 xylose isomerase domain- containing protein; xylose isomerase 2747099 8358380 Cpin_2228 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003121920.1 2746236 R 485918 CDS YP_003121921.1 256421268 8358381 complement(2747261..2747401) 1 NC_013132.1 hypothetical protein 2747401 8358381 Cpin_2229 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121921.1 2747261 R 485918 CDS YP_003121922.1 256421269 8358382 2747444..2748268 1 NC_013132.1 KEGG: azo:azo3659 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2748268 8358382 Cpin_2230 Chitinophaga pinensis DSM 2588 orotidine 5'-phosphate decarboxylase YP_003121922.1 2747444 D 485918 CDS YP_003121923.1 256421270 8358383 2748403..2749581 1 NC_013132.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: gme:Gmet_2075 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 2749581 8358383 Cpin_2231 Chitinophaga pinensis DSM 2588 acyl-CoA dehydrogenase domain-containing protein YP_003121923.1 2748403 D 485918 CDS YP_003121924.1 256421271 8358384 2749628..2750653 1 NC_013132.1 PFAM: ApbE family lipoprotein; KEGG: pmr:PMI0358 thiamine biosynthesis lipoprotein; ApbE family lipoprotein 2750653 8358384 Cpin_2232 Chitinophaga pinensis DSM 2588 ApbE family lipoprotein YP_003121924.1 2749628 D 485918 CDS YP_003121925.1 256421272 8358385 complement(2750715..2751335) 1 NC_013132.1 hypothetical protein 2751335 8358385 Cpin_2233 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121925.1 2750715 R 485918 CDS YP_003121926.1 256421273 8358386 complement(2751361..2751990) 1 NC_013132.1 KEGG: cti:RALTA_A1507 lipoprotein; lipoprotein 2751990 8358386 Cpin_2234 Chitinophaga pinensis DSM 2588 lipoprotein YP_003121926.1 2751361 R 485918 CDS YP_003121927.1 256421274 8358387 2752068..2752187 1 NC_013132.1 hypothetical protein 2752187 8358387 Cpin_2235 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121927.1 2752068 D 485918 CDS YP_003121928.1 256421275 8358388 complement(2752452..2753096) 1 NC_013132.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: rec:RHECIAT_PC0000786 hydrolase protein, haloacid dehalogenase-like family; HAD-superfamily hydrolase 2753096 8358388 Cpin_2236 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003121928.1 2752452 R 485918 CDS YP_003121929.1 256421276 8358389 complement(2753167..2754051) 1 NC_013132.1 hypothetical protein 2754051 8358389 Cpin_2237 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121929.1 2753167 R 485918 CDS YP_003121930.1 256421277 8358390 complement(2754029..2756503) 1 NC_013132.1 KEGG: aba:Acid345_1764 membrane protein; hypothetical protein 2756503 8358390 Cpin_2238 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121930.1 2754029 R 485918 CDS YP_003121931.1 256421278 8358391 complement(2756892..2757734) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: scl:sce3225 dehydrogenase; short-chain dehydrogenase/reductase SDR 2757734 8358391 Cpin_2239 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003121931.1 2756892 R 485918 CDS YP_003121932.1 256421279 8358392 complement(2757821..2758759) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 2758759 8358392 Cpin_2240 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121932.1 2757821 R 485918 CDS YP_003121933.1 256421280 8358393 2758879..2759634 1 NC_013132.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: abu:Abu_0012 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 2759634 8358393 Cpin_2241 Chitinophaga pinensis DSM 2588 molybdenum ABC transporter periplasmic molybdate-binding protein YP_003121933.1 2758879 D 485918 CDS YP_003121934.1 256421281 8358394 2759631..2760305 1 NC_013132.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tdn:Suden_0925 molybdate ABC transporter permease; molybdate ABC transporter inner membrane protein 2760305 8358394 Cpin_2242 Chitinophaga pinensis DSM 2588 molybdate ABC transporter inner membrane protein YP_003121934.1 2759631 D 485918 CDS YP_003121935.1 256421282 8358395 2760327..2761172 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tdn:Suden_0926 ABC transporter-related protein; ABC transporter 2761172 8358395 Cpin_2243 Chitinophaga pinensis DSM 2588 ABC transporter YP_003121935.1 2760327 D 485918 CDS YP_003121936.1 256421283 8358396 2761332..2762087 1 NC_013132.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: hypothetical protein; glycerophosphoryl diester phosphodiesterase 2762087 8358396 Cpin_2244 Chitinophaga pinensis DSM 2588 glycerophosphoryl diester phosphodiesterase YP_003121936.1 2761332 D 485918 CDS YP_003121937.1 256421284 8358398 complement(2762385..2763533) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bcb:BCB4264_A1387 sensor histidine kinase KinD; histidine kinase 2763533 8358398 Cpin_2245 Chitinophaga pinensis DSM 2588 histidine kinase YP_003121937.1 2762385 R 485918 CDS YP_003121938.1 256421285 8358399 2763648..2764673 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2879 glycosyl transferase family protein; family 2 glycosyl transferase 2764673 8358399 Cpin_2246 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003121938.1 2763648 D 485918 CDS YP_003121939.1 256421286 8358400 2764725..2764925 1 NC_013132.1 hypothetical protein 2764925 8358400 Cpin_2247 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121939.1 2764725 D 485918 CDS YP_003121940.1 256421287 8358401 complement(2765004..2765228) 1 NC_013132.1 hypothetical protein 2765228 8358401 Cpin_2248 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121940.1 2765004 R 485918 CDS YP_003121941.1 256421288 8358404 2766772..2768310 1 NC_013132.1 PFAM: alpha-L-arabinofuranosidase; KEGG: bha:BH1874 alpha-L-arabinosidase; alpha-L-arabinofuranosidase 2768310 8358404 Cpin_2249 Chitinophaga pinensis DSM 2588 alpha-L-arabinofuranosidase YP_003121941.1 2766772 D 485918 CDS YP_003121942.1 256421289 8358405 complement(2768414..2770969) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00185 TonB-dependent receptor; TonB-dependent receptor 2770969 8358405 Cpin_2250 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003121942.1 2768414 R 485918 CDS YP_003121943.1 256421290 8358406 complement(2771330..2773588) 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein; coagulation factor 5/8 type domain-containing protein 2773588 8358406 Cpin_2251 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003121943.1 2771330 R 485918 CDS YP_003121944.1 256421291 8358407 complement(2773600..2776464) 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: SLEI family protein; hypothetical protein 2776464 8358407 Cpin_2252 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121944.1 2773600 R 485918 CDS YP_003121945.1 256421292 8358408 complement(2776470..2777966) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: psa:PST_0048 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 2777966 8358408 Cpin_2253 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003121945.1 2776470 R 485918 CDS YP_003121946.1 256421293 8358409 complement(2777994..2779454) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: psa:PST_0048 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 2779454 8358409 Cpin_2254 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003121946.1 2777994 R 485918 CDS YP_003121947.1 256421294 8358410 complement(2779463..2780590) 1 NC_013132.1 hypothetical protein 2780590 8358410 Cpin_2255 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121947.1 2779463 R 485918 CDS YP_003121948.1 256421295 8358411 complement(2780654..2781040) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nis:NIS_0118 two-component response regulator; response regulator receiver protein 2781040 8358411 Cpin_2256 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003121948.1 2780654 R 485918 CDS YP_003121949.1 256421296 8358412 2781396..2784884 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; KEGG: aav:Aave_3996 multi-sensor hybrid histidine kinase; GAF sensor hybrid histidine kinase 2784884 8358412 Cpin_2257 Chitinophaga pinensis DSM 2588 GAF sensor hybrid histidine kinase YP_003121949.1 2781396 D 485918 CDS YP_003121950.1 256421297 8358413 2784900..2785721 1 NC_013132.1 KEGG: vvy:VVA0934 methylase of chemotaxis methyl- accepting protein; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; CheR-typeMCP methyltransferase 2785721 8358413 Cpin_2258 Chitinophaga pinensis DSM 2588 CheR-typeMCP methyltransferase YP_003121950.1 2784900 D 485918 CDS YP_003121951.1 256421298 8358414 2785746..2786306 1 NC_013132.1 PFAM: CheB methylesterase; KEGG: aav:Aave_3994 CheB methylesterase; CheB methylesterase 2786306 8358414 Cpin_2259 Chitinophaga pinensis DSM 2588 CheB methylesterase YP_003121951.1 2785746 D 485918 CDS YP_003121952.1 256421299 8358415 2786361..2787446 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2639 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 2787446 8358415 Cpin_2260 Chitinophaga pinensis DSM 2588 response regulator receiver sensor signal transduction histidine kinase YP_003121952.1 2786361 D 485918 CDS YP_003121953.1 256421300 8358416 2787520..2787732 1 NC_013132.1 hypothetical protein 2787732 8358416 Cpin_2261 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121953.1 2787520 D 485918 CDS YP_003121954.1 256421301 8358417 complement(2787861..2789000) 1 NC_013132.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR; anti-FecI sigma factor FecR 2789000 8358417 Cpin_2262 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003121954.1 2787861 R 485918 CDS YP_003121955.1 256421302 8358418 complement(2789043..2789576) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: bja:blr3042 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 2789576 8358418 Cpin_2263 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003121955.1 2789043 R 485918 CDS YP_003121956.1 256421303 8358419 2790034..2793561 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 2793561 8358419 Cpin_2264 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003121956.1 2790034 D 485918 CDS YP_003121957.1 256421304 8358420 2793577..2794932 1 NC_013132.1 KEGG: mxa:MXAN_4747 lipoprotein; hypothetical protein 2794932 8358420 Cpin_2265 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121957.1 2793577 D 485918 CDS YP_003121958.1 256421305 8358421 2794937..2796322 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sbp:Sbal223_2403 redoxin domain protein; alkyl hydroperoxide reductase 2796322 8358421 Cpin_2266 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003121958.1 2794937 D 485918 CDS YP_003121959.1 256421306 8358422 complement(2796338..2796622) 1 NC_013132.1 hypothetical protein 2796622 8358422 Cpin_2267 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121959.1 2796338 R 485918 CDS YP_003121960.1 256421307 8358423 complement(2796923..2797189) 1 NC_013132.1 hypothetical protein 2797189 8358423 Cpin_2268 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121960.1 2796923 R 485918 CDS YP_003121961.1 256421308 8358424 complement(2797238..2798269) 1 NC_013132.1 hypothetical protein 2798269 8358424 Cpin_2269 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121961.1 2797238 R 485918 CDS YP_003121962.1 256421309 8358425 complement(2798279..2798692) 1 NC_013132.1 KEGG: mpt:Mpe_A2655 hypothetical protein; hypothetical protein 2798692 8358425 Cpin_2270 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121962.1 2798279 R 485918 CDS YP_003121963.1 256421310 8358426 complement(2798720..2799700) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swi:Swit_1585 AraC family transcriptional regulator; AraC family transcriptional regulator 2799700 8358426 Cpin_2271 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121963.1 2798720 R 485918 CDS YP_003121964.1 256421311 8358427 2799910..2801175 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_4454 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 2801175 8358427 Cpin_2272 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003121964.1 2799910 D 485918 CDS YP_003121965.1 256421312 8358428 2801193..2802641 1 NC_013132.1 KEGG: xau:Xaut_2803 heat repeat-containing PBS lyase; hypothetical protein 2802641 8358428 Cpin_2273 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121965.1 2801193 D 485918 CDS YP_003121966.1 256421313 8358429 2802739..2803152 1 NC_013132.1 hypothetical protein 2803152 8358429 Cpin_2274 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121966.1 2802739 D 485918 CDS YP_003121967.1 256421314 8358430 2803548..2806184 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: hypothetical protein; glycoside hydrolase 2806184 8358430 Cpin_2275 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003121967.1 2803548 D 485918 CDS YP_003121968.1 256421315 8358431 2806659..2807483 1 NC_013132.1 KEGG: gur:Gura_3003 YVTN beta-propeller repeat- containing protein; hypothetical protein 2807483 8358431 Cpin_2276 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121968.1 2806659 D 485918 CDS YP_003121969.1 256421316 8358432 complement(2807467..2808705) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_2094 glycosyl transferase; group 1 glycosyl transferase 2808705 8358432 Cpin_2277 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003121969.1 2807467 R 485918 CDS YP_003121970.1 256421317 8358433 complement(2808714..2810117) 1 NC_013132.1 KEGG: amc:MADE_02480 sugar transferase involved in lipopolysaccharide synthesis; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; undecaprenyl-phosphate glucose phosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 2810117 8358433 Cpin_2278 Chitinophaga pinensis DSM 2588 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_003121970.1 2808714 R 485918 CDS YP_003121971.1 256421318 8358434 complement(2810202..2810939) 1 NC_013132.1 TIGRFAM: methyltransferase FkbM family; KEGG: noc:Noc_1518 methyltransferase FkbM; FkbM family methyltransferase 2810939 8358434 Cpin_2279 Chitinophaga pinensis DSM 2588 FkbM family methyltransferase YP_003121971.1 2810202 R 485918 CDS YP_003121972.1 256421319 8358435 complement(2810936..2812039) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: ypi:YpsIP31758_3042 glycosyl transferase WbyK, group 1 family protein; group 1 glycosyl transferase 2812039 8358435 Cpin_2280 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003121972.1 2810936 R 485918 CDS YP_003121973.1 256421320 8358436 complement(2812044..2813480) 1 NC_013132.1 hypothetical protein 2813480 8358436 Cpin_2281 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121973.1 2812044 R 485918 CDS YP_003121974.1 256421321 8358437 complement(2813492..2814394) 1 NC_013132.1 KEGG: pnu:Pnuc_0307 hemolytic protein HlpA-like protein; hemolytic protein HlpA-like protein 2814394 8358437 Cpin_2282 Chitinophaga pinensis DSM 2588 hemolytic protein HlpA-like protein YP_003121974.1 2813492 R 485918 CDS YP_003121975.1 256421322 8358438 complement(2814401..2815042) 1 NC_013132.1 KEGG: mca:MCA1151 hypothetical protein; hypothetical protein 2815042 8358438 Cpin_2283 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121975.1 2814401 R 485918 CDS YP_003121976.1 256421323 8358439 complement(2815035..2815730) 1 NC_013132.1 KEGG: pub:SAR11_0393 SAM-dependent methyltransferase; hypothetical protein 2815730 8358439 Cpin_2284 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121976.1 2815035 R 485918 CDS YP_003121977.1 256421324 8358440 complement(2815727..2817076) 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein; KEGG: dol:Dole_0532 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2817076 8358440 Cpin_2285 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein YP_003121977.1 2815727 R 485918 CDS YP_003121978.1 256421325 8358441 complement(2817069..2819423) 1 NC_013132.1 KEGG: sun:SUN_1559 capsular polysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 2819423 8358441 Cpin_2286 Chitinophaga pinensis DSM 2588 capsular exopolysaccharide family protein YP_003121978.1 2817069 R 485918 CDS YP_003121979.1 256421326 8358442 complement(2819432..2820196) 1 NC_013132.1 PFAM: polysaccharide export protein; KEGG: sun:SUN_1557 polysaccharide export system outer membrane protein; polysaccharide export protein 2820196 8358442 Cpin_2287 Chitinophaga pinensis DSM 2588 polysaccharide export protein YP_003121979.1 2819432 R 485918 CDS YP_003121980.1 256421327 8358443 complement(2820256..2821491) 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: ppu:PP_1781 O-acyltransferase; acyltransferase 3 2821491 8358443 Cpin_2288 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003121980.1 2820256 R 485918 CDS YP_003121981.1 256421328 8358444 2821822..2822718 1 NC_013132.1 KEGG: gbm:Gbem_2578 hypothetical protein; hypothetical protein 2822718 8358444 Cpin_2289 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121981.1 2821822 D 485918 CDS YP_003121982.1 256421329 8358445 2822746..2823546 1 NC_013132.1 TIGRFAM: methyltransferase FkbM family; KEGG: rru:Rru_A2093 methyltransferase FkbM; FkbM family methyltransferase 2823546 8358445 Cpin_2290 Chitinophaga pinensis DSM 2588 FkbM family methyltransferase YP_003121982.1 2822746 D 485918 CDS YP_003121983.1 256421330 8358446 2823648..2825075 1 NC_013132.1 PFAM: protein of unknown function UPF0027; KEGG: pca:Pcar_2835 hypothetical protein; hypothetical protein 2825075 8358446 Cpin_2291 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121983.1 2823648 D 485918 CDS YP_003121984.1 256421331 8358447 2825150..2826115 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: mrd:Mrad2831_2427 beta-lactamase domain- containing protein; beta-lactamase domain-containing protein 2826115 8358447 Cpin_2292 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003121984.1 2825150 D 485918 CDS YP_003121985.1 256421332 8358448 2826529..2826639 1 NC_013132.1 hypothetical protein 2826639 8358448 Cpin_2293 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121985.1 2826529 D 485918 CDS YP_003121986.1 256421333 8358449 2826719..2827138 1 NC_013132.1 hypothetical protein 2827138 8358449 Cpin_2294 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121986.1 2826719 D 485918 CDS YP_003121987.1 256421334 8358450 2827215..2827697 1 NC_013132.1 hypothetical protein 2827697 8358450 Cpin_2295 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121987.1 2827215 D 485918 CDS YP_003121988.1 256421335 8358451 2827725..2829842 1 NC_013132.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: bbr:BB4580 copper resistance protein; L-ascorbate oxidase 2829842 8358451 Cpin_2296 Chitinophaga pinensis DSM 2588 L-ascorbate oxidase YP_003121988.1 2827725 D 485918 CDS YP_003121989.1 256421336 8358452 2830002..2830805 1 NC_013132.1 hypothetical protein 2830805 8358452 Cpin_2297 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121989.1 2830002 D 485918 CDS YP_003121990.1 256421337 8358453 complement(2830910..2831842) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppf:Pput_2236 AraC family transcriptional regulator; AraC family transcriptional regulator 2831842 8358453 Cpin_2298 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121990.1 2830910 R 485918 CDS YP_003121991.1 256421338 8358454 2831949..2832803 1 NC_013132.1 KEGG: net:Neut_1346 transcriptional regulator, AraC family protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; AraC family transcriptional regulator 2832803 8358454 Cpin_2299 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003121991.1 2831949 D 485918 CDS YP_003121992.1 256421339 8358455 2833322..2835772 1 NC_013132.1 PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: acr:Acry_1823 ATPase; ATPase AAA 2835772 8358455 Cpin_2300 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003121992.1 2833322 D 485918 CDS YP_003121993.1 256421340 8358456 2835829..2836275 1 NC_013132.1 hypothetical protein 2836275 8358456 Cpin_2301 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121993.1 2835829 D 485918 CDS YP_003121994.1 256421341 8358457 2836461..2837837 1 NC_013132.1 KEGG: GL21531 gene product from transcript GL21531- RA; hypothetical protein 2837837 8358457 Cpin_2302 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121994.1 2836461 D 485918 CDS YP_003121995.1 256421342 8358458 2837925..2838812 1 NC_013132.1 hypothetical protein 2838812 8358458 Cpin_2303 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121995.1 2837925 D 485918 CDS YP_003121996.1 256421343 8358459 2838824..2839900 1 NC_013132.1 PFAM: lytic transglycosylase catalytic; KEGG: sfu:Sfum_0486 lytic transglycosylase, catalytic; lytic transglycosylase 2839900 8358459 Cpin_2304 Chitinophaga pinensis DSM 2588 lytic transglycosylase YP_003121996.1 2838824 D 485918 CDS YP_003121997.1 256421344 8358460 complement(2840091..2841923) 1 NC_013132.1 hypothetical protein 2841923 8358460 Cpin_2305 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003121997.1 2840091 R 485918 CDS YP_003121998.1 256421345 8358461 complement(2841933..2842364) 1 NC_013132.1 PFAM: GPW/gp25 family protein; KEGG: rde:RD1_4224 hypothetical protein; GPW/gp25 family protein 2842364 8358461 Cpin_2306 Chitinophaga pinensis DSM 2588 GPW/gp25 family protein YP_003121998.1 2841933 R 485918 CDS YP_003121999.1 256421346 8358462 complement(2842383..2843453) 1 NC_013132.1 PFAM: PKD domain containing protein; PKD domain-containing protein 2843453 8358462 Cpin_2307 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003121999.1 2842383 R 485918 CDS YP_003122000.1 256421347 8358463 2843606..2844559 1 NC_013132.1 hypothetical protein 2844559 8358463 Cpin_2308 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122000.1 2843606 D 485918 CDS YP_003122001.1 256421348 8358464 2844636..2845496 1 NC_013132.1 hypothetical protein 2845496 8358464 Cpin_2309 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122001.1 2844636 D 485918 CDS YP_003122002.1 256421349 8358465 2845542..2846717 1 NC_013132.1 hypothetical protein 2846717 8358465 Cpin_2310 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122002.1 2845542 D 485918 CDS YP_003122003.1 256421350 8358466 2846740..2847252 1 NC_013132.1 KEGG: DNA-directed RNA polymerase, omega subunit family protein; hypothetical protein 2847252 8358466 Cpin_2311 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122003.1 2846740 D 485918 CDS YP_003122004.1 256421351 8358467 2847367..2847753 1 NC_013132.1 hypothetical protein 2847753 8358467 Cpin_2312 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122004.1 2847367 D 485918 CDS YP_003122005.1 256421352 8358468 complement(2847971..2848360) 1 NC_013132.1 hypothetical protein 2848360 8358468 Cpin_2313 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122005.1 2847971 R 485918 CDS YP_003122006.1 256421353 8358469 complement(2848374..2848907) 1 NC_013132.1 PFAM: YceI family protein; KEGG: dar:Daro_2795 YceI; hypothetical protein 2848907 8358469 Cpin_2314 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122006.1 2848374 R 485918 CDS YP_003122007.1 256421354 8358470 2849075..2849521 1 NC_013132.1 KEGG: mxa:MXAN_6481 hypothetical protein; hypothetical protein 2849521 8358470 Cpin_2315 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122007.1 2849075 D 485918 CDS YP_003122008.1 256421355 8358471 complement(2849514..2850089) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein; Crp/Fnr family transcriptional regulator 2850089 8358471 Cpin_2316 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122008.1 2849514 R 485918 CDS YP_003122009.1 256421356 8358472 complement(2850105..2851046) 1 NC_013132.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 2851046 8358472 Cpin_2317 Chitinophaga pinensis DSM 2588 pantothenate kinase YP_003122009.1 2850105 R 485918 CDS YP_003122010.1 256421357 8358473 complement(2851095..2852453) 1 NC_013132.1 PFAM: aldehyde dehydrogenase; KEGG: scl:sce5973 succinate-semialdehyde dehydrogenase (NAD(P)(+)); aldehyde dehydrogenase 2852453 8358473 Cpin_2318 Chitinophaga pinensis DSM 2588 aldehyde dehydrogenase YP_003122010.1 2851095 R 485918 CDS YP_003122011.1 256421358 8358474 complement(2852657..2853664) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vco:VC0395_A2573 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator 2853664 8358474 Cpin_2319 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122011.1 2852657 R 485918 CDS YP_003122012.1 256421359 8358475 2854247..2857090 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_3218 TonB-dependent receptor for Fe; TonB-dependent receptor 2857090 8358475 Cpin_2320 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003122012.1 2854247 D 485918 CDS YP_003122013.1 256421360 8358476 complement(2857279..2858769) 1 NC_013132.1 KEGG: pca:Pcar_2983 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 2858769 8358476 Cpin_2321 Chitinophaga pinensis DSM 2588 pyruvate kinase YP_003122013.1 2857279 R 485918 CDS YP_003122014.1 256421361 8358477 complement(2858781..2859761) 1 NC_013132.1 KEGG: ban:BA4844 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 2859761 8358477 Cpin_2322 Chitinophaga pinensis DSM 2588 6-phosphofructokinase YP_003122014.1 2858781 R 485918 CDS YP_003122015.1 256421362 8358478 2860166..2862223 1 NC_013132.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: pha:PSHAa1273 prolyl endopeptidase; prolyl oligopeptidase 2862223 8358478 Cpin_2323 Chitinophaga pinensis DSM 2588 prolyl oligopeptidase YP_003122015.1 2860166 D 485918 CDS YP_003122016.1 256421363 8358479 2862542..2863435 1 NC_013132.1 PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein; dTDP-4-dehydrorhamnose reductase 2863435 8358479 Cpin_2324 Chitinophaga pinensis DSM 2588 dTDP-4-dehydrorhamnose reductase YP_003122016.1 2862542 D 485918 CDS YP_003122017.1 256421364 8358480 complement(2863933..2865048) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2865048 8358480 Cpin_2325 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122017.1 2863933 R 485918 CDS YP_003122018.1 256421365 8358481 complement(2865230..2866885) 1 NC_013132.1 KEGG: glo:Glov_3556 TonB-dependent receptor plug; hypothetical protein 2866885 8358481 Cpin_2326 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122018.1 2865230 R 485918 CDS YP_003122019.1 256421366 8358482 complement(2866903..2869974) 1 NC_013132.1 PFAM: hypothetical protein; Tetratricopeptide TPR_3; hypothetical protein; SMART: Sel1 domain protein repeat-containing protein; hypothetical protein; KEGG: hypothetical protein; hypothetical protein 2869974 8358482 Cpin_2327 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122019.1 2866903 R 485918 CDS YP_003122020.1 256421367 8358483 2870564..2870977 1 NC_013132.1 PFAM: DoxX family protein; KEGG: pfo:Pfl01_1964 DoxX; DoxX family protein 2870977 8358483 Cpin_2328 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003122020.1 2870564 D 485918 CDS YP_003122021.1 256421368 8358484 2871067..2871486 1 NC_013132.1 PFAM: thioesterase superfamily protein; KEGG: sfu:Sfum_1216 thioesterase superfamily protein; thioesterase superfamily protein 2871486 8358484 Cpin_2329 Chitinophaga pinensis DSM 2588 thioesterase superfamily protein YP_003122021.1 2871067 D 485918 CDS YP_003122022.1 256421369 8358485 2871490..2872746 1 NC_013132.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: gme:Gmet_0196 competence/damage-inducible protein CinA; competence/damage-inducible protein CinA 2872746 8358485 Cpin_2330 Chitinophaga pinensis DSM 2588 competence/damage-inducible protein CinA YP_003122022.1 2871490 D 485918 CDS YP_003122023.1 256421370 8358486 2872789..2874219 1 NC_013132.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: sus:Acid_0914 dihydrolipoyllysine-residue succinyltransferase; dehydrogenase 2874219 8358486 Cpin_2331 Chitinophaga pinensis DSM 2588 dehydrogenase YP_003122023.1 2872789 D 485918 CDS YP_003122024.1 256421371 8358487 complement(2874793..2875119) 1 NC_013132.1 PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: dde:Dde_1175 RNA-binding region RNP-1; RNP-1 like RNA-binding protein 2875119 8358487 Cpin_2332 Chitinophaga pinensis DSM 2588 RNP-1 like RNA-binding protein YP_003122024.1 2874793 R 485918 CDS YP_003122025.1 256421372 8358488 2875311..2876030 1 NC_013132.1 hypothetical protein 2876030 8358488 Cpin_2333 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122025.1 2875311 D 485918 CDS YP_003122026.1 256421373 8358489 complement(2876313..2876927) 1 NC_013132.1 KEGG: fph:Fphi_0348 hypothetical protein; hypothetical protein 2876927 8358489 Cpin_2334 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122026.1 2876313 R 485918 CDS YP_003122027.1 256421374 8358490 complement(2877172..2877759) 1 NC_013132.1 PFAM: protein of unknown function DUF985; KEGG: pca:Pcar_1054 hypothetical protein; hypothetical protein 2877759 8358490 Cpin_2335 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122027.1 2877172 R 485918 CDS YP_003122028.1 256421375 8358491 complement(2877778..2878602) 1 NC_013132.1 KEGG: swd:Swoo_1190 AraC family transcriptional regulator; hypothetical protein 2878602 8358491 Cpin_2336 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122028.1 2877778 R 485918 CDS YP_003122029.1 256421376 8358492 complement(2879245..2882001) 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 2882001 8358492 Cpin_2337 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003122029.1 2879245 R 485918 CDS YP_003122030.1 256421377 8358493 complement(2882074..2882955) 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: xac:XAC2809 hypothetical protein; hypothetical protein 2882955 8358493 Cpin_2338 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122030.1 2882074 R 485918 CDS YP_003122031.1 256421378 8358494 complement(2882963..2883709) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: hypothetical protein; family 2 glycosyl transferase 2883709 8358494 Cpin_2339 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003122031.1 2882963 R 485918 CDS YP_003122032.1 256421379 8358495 complement(2883779..2884552) 1 NC_013132.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: hypothetical protein; K02342 DNA polymerase III subunit epsilon; exonuclease RNase T and DNA polymerase III 2884552 8358495 Cpin_2340 Chitinophaga pinensis DSM 2588 exonuclease RNase T and DNA polymerase III YP_003122032.1 2883779 R 485918 CDS YP_003122033.1 256421380 8358496 complement(2884562..2885914) 1 NC_013132.1 PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: ftm:FTM_0592 UDP-N-acetylmuramate:L-alanyl- gamma-D-glutamyl-meso-diaminopimelate ligase; Mur ligase middle domain-containing protein 2885914 8358496 Cpin_2341 Chitinophaga pinensis DSM 2588 Mur ligase middle domain-containing protein YP_003122033.1 2884562 R 485918 CDS YP_003122034.1 256421381 8358497 2886100..2886249 1 NC_013132.1 hypothetical protein 2886249 8358497 Cpin_2342 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122034.1 2886100 D 485918 CDS YP_003122035.1 256421382 8358498 2886249..2886578 1 NC_013132.1 KEGG: bcr:BCAH187_A4813 hypothetical protein; hypothetical protein 2886578 8358498 Cpin_2343 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122035.1 2886249 D 485918 CDS YP_003122036.1 256421383 8358499 2886673..2887236 1 NC_013132.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy- lyase; PFAM: flavoprotein; KEGG: ade:Adeh_0373 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2887236 8358499 Cpin_2344 Chitinophaga pinensis DSM 2588 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_003122036.1 2886673 D 485918 CDS YP_003122037.1 256421384 8358500 2887427..2887840 1 NC_013132.1 KEGG: cff:CFF8240_1505 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 2887840 8358500 Cpin_2345 Chitinophaga pinensis DSM 2588 3-dehydroquinate dehydratase YP_003122037.1 2887427 D 485918 CDS YP_003122038.1 256421385 8358501 complement(2887940..2889040) 1 NC_013132.1 PFAM: peptidase M42 family protein; peptidase M20; KEGG: glo:Glov_1943 peptidase M42 family protein; peptidase M42 family protein 2889040 8358501 Cpin_2346 Chitinophaga pinensis DSM 2588 peptidase M42 family protein YP_003122038.1 2887940 R 485918 CDS YP_003122039.1 256421386 8358502 complement(2889105..2889941) 1 NC_013132.1 KEGG: dal:Dalk_3710 hydroxymethylbutenyl pyrophosphate reductase; hypothetical protein 2889941 8358502 Cpin_2347 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122039.1 2889105 R 485918 CDS YP_003122040.1 256421387 8358503 complement(2890056..2891594) 1 NC_013132.1 PFAM: carboxyl transferase; KEGG: sus:Acid_1492 carboxyl transferase; carboxyl transferase 2891594 8358503 Cpin_2348 Chitinophaga pinensis DSM 2588 carboxyl transferase YP_003122040.1 2890056 R 485918 CDS YP_003122041.1 256421388 8358504 complement(2891703..2892161) 1 NC_013132.1 hypothetical protein 2892161 8358504 Cpin_2349 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122041.1 2891703 R 485918 CDS YP_003122042.1 256421389 8358505 2892275..2893258 1 NC_013132.1 KEGG: bav:BAV0647 acyl-protein synthetase; hypothetical protein 2893258 8358505 Cpin_2350 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122042.1 2892275 D 485918 CDS YP_003122043.1 256421390 8358506 complement(2893255..2893962) 1 NC_013132.1 hypothetical protein 2893962 8358506 Cpin_2351 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122043.1 2893255 R 485918 CDS YP_003122044.1 256421391 8358507 2894248..2894451 1 NC_013132.1 hypothetical protein 2894451 8358507 Cpin_2352 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122044.1 2894248 D 485918 CDS YP_003122045.1 256421392 8358508 2894843..2896447 1 NC_013132.1 hypothetical protein 2896447 8358508 Cpin_2353 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122045.1 2894843 D 485918 CDS YP_003122046.1 256421393 8358509 2896985..2897197 1 NC_013132.1 KEGG: sml:Smlt3111 hypothetical protein; hypothetical protein 2897197 8358509 Cpin_2354 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122046.1 2896985 D 485918 CDS YP_003122047.1 256421394 8358510 complement(2897276..2897665) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: msl:Msil_1887 adenylate/guanylate cyclase; response regulator receiver protein 2897665 8358510 Cpin_2355 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003122047.1 2897276 R 485918 CDS YP_003122048.1 256421395 8358511 complement(2897675..2898403) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rle:RL1819 two component sensor histidine kinase transcriptional regulatory protein; histidine kinase 2898403 8358511 Cpin_2356 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122048.1 2897675 R 485918 CDS YP_003122049.1 256421396 8358512 2898833..2899537 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: mms:mma_2916 LuxR family DNA-binding response regulator; LuxR family transcriptional regulator 2899537 8358512 Cpin_2357 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003122049.1 2898833 D 485918 CDS YP_003122050.1 256421397 8358513 2899682..2900473 1 NC_013132.1 KEGG: sun:SUN_1557 polysaccharide export system outer membrane protein; polysaccharide export periplasmic protein 2900473 8358513 Cpin_2358 Chitinophaga pinensis DSM 2588 polysaccharide export periplasmic protein YP_003122050.1 2899682 D 485918 CDS YP_003122051.1 256421398 8358514 2900526..2902910 1 NC_013132.1 KEGG: sun:SUN_1559 capsular polysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 2902910 8358514 Cpin_2359 Chitinophaga pinensis DSM 2588 capsular exopolysaccharide family protein YP_003122051.1 2900526 D 485918 CDS YP_003122052.1 256421399 8358515 2903100..2903657 1 NC_013132.1 PFAM: NGN domain protein; SMART: NGN domain protein; KEGG: sat:SYN_00580 transcription antitermination protein; NusG antitermination factor 2903657 8358515 Cpin_2360 Chitinophaga pinensis DSM 2588 NusG antitermination factor YP_003122052.1 2903100 D 485918 CDS YP_003122053.1 256421400 8358516 2903679..2904698 1 NC_013132.1 PFAM: Nucleotidyl transferase; KEGG: tcx:Tcr_1678 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase 2904698 8358516 Cpin_2361 Chitinophaga pinensis DSM 2588 mannose-1-phosphate guanylyltransferase YP_003122053.1 2903679 D 485918 CDS YP_003122054.1 256421401 8358517 2904714..2905655 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; KEGG: gme:Gmet_1312 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2905655 8358517 Cpin_2362 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003122054.1 2904714 D 485918 CDS YP_003122055.1 256421402 8358518 2905691..2907037 1 NC_013132.1 KEGG: hch:HCH_04938 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 2907037 8358518 Cpin_2363 Chitinophaga pinensis DSM 2588 nucleotide sugar dehydrogenase YP_003122055.1 2905691 D 485918 CDS YP_003122056.1 256421403 8358519 2907080..2908177 1 NC_013132.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 2908177 8358519 Cpin_2364 Chitinophaga pinensis DSM 2588 GDP-mannose 4,6-dehydratase YP_003122056.1 2907080 D 485918 CDS YP_003122057.1 256421404 8358520 2908202..2909530 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein; KEGG: cti:RALTA_B0034 hypothetical protein; polysaccharide biosynthesis protein 2909530 8358520 Cpin_2365 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein YP_003122057.1 2908202 D 485918 CDS YP_003122058.1 256421405 8358521 2909527..2910543 1 NC_013132.1 KEGG: abn:AB57_0097 hypothetical protein; hypothetical protein 2910543 8358521 Cpin_2366 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122058.1 2909527 D 485918 CDS YP_003122059.1 256421406 8358522 2910527..2911624 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: vco:VC0395_A0450 polysaccharide biosynthesis protein; group 1 glycosyl transferase 2911624 8358522 Cpin_2367 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003122059.1 2910527 D 485918 CDS YP_003122060.1 256421407 8358523 2911627..2912856 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4651 glycosyl transferase, group 1; group 1 glycosyl transferase 2912856 8358523 Cpin_2368 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003122060.1 2911627 D 485918 CDS YP_003122061.1 256421408 8358524 2912884..2914317 1 NC_013132.1 KEGG: cti:RALTA_B0036 hypothetical protein; hypothetical protein 2914317 8358524 Cpin_2369 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122061.1 2912884 D 485918 CDS YP_003122062.1 256421409 8358525 2914598..2915605 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: mlo:mlr0961 glycosyltransferase; acyltransferase 3 2915605 8358525 Cpin_2370 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003122062.1 2914598 D 485918 CDS YP_003122063.1 256421410 8358526 2915633..2916820 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_B0037 glycosyl transferase; group 1 glycosyl transferase 2916820 8358526 Cpin_2371 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003122063.1 2915633 D 485918 CDS YP_003122064.1 256421411 8358527 2916862..2917992 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: tgr:Tgr7_2096 glycosyltransferase; group 1 glycosyl transferase 2917992 8358527 Cpin_2372 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003122064.1 2916862 D 485918 CDS YP_003122065.1 256421412 8358528 2918046..2918516 1 NC_013132.1 PFAM: VanZ family protein; KEGG: bha:BH2294 hypothetical protein; VanZ family protein 2918516 8358528 Cpin_2373 Chitinophaga pinensis DSM 2588 VanZ family protein YP_003122065.1 2918046 D 485918 CDS YP_003122066.1 256421413 8358529 2918523..2919089 1 NC_013132.1 KEGG: sus:Acid_4656 colanic acid biosynthesis acetyltransferase WcaF; colanic acid biosynthesis acetyltransferase WcaF 2919089 8358529 Cpin_2374 Chitinophaga pinensis DSM 2588 colanic acid biosynthesis acetyltransferase WcaF YP_003122066.1 2918523 D 485918 CDS YP_003122067.1 256421414 8358530 2919123..2920370 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: ent:Ent638_2664 glycosyl transferase; group 1 glycosyl transferase 2920370 8358530 Cpin_2375 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003122067.1 2919123 D 485918 CDS YP_003122068.1 256421415 8358531 2920393..2921778 1 NC_013132.1 KEGG: mmw:Mmwyl1_0842 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; UDP-phosphate glucose phosphotransferase 2921778 8358531 Cpin_2376 Chitinophaga pinensis DSM 2588 UDP-phosphate glucose phosphotransferase YP_003122068.1 2920393 D 485918 CDS YP_003122069.1 256421416 8358532 2921914..2922600 1 NC_013132.1 hypothetical protein 2922600 8358532 Cpin_2377 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122069.1 2921914 D 485918 CDS YP_003122070.1 256421417 8358533 complement(2922708..2924195) 1 NC_013132.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 2924195 8358533 Cpin_2378 Chitinophaga pinensis DSM 2588 malate:quinone oxidoreductase YP_003122070.1 2922708 R 485918 CDS YP_003122071.1 256421418 8358534 complement(2924354..2925835) 1 NC_013132.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: glo:Glov_3344 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 2925835 8358534 Cpin_2379 Chitinophaga pinensis DSM 2588 rubredoxin-type Fe(Cys)4 protein YP_003122071.1 2924354 R 485918 CDS YP_003122072.1 256421419 8358535 complement(2925902..2929468) 1 NC_013132.1 PFAM: molybdopterin oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: pmy:Pmen_2094 assimilatory nitrate reductase (NADH) alpha subunit apoprotein; molybdopterin oxidoreductase 2929468 8358535 Cpin_2380 Chitinophaga pinensis DSM 2588 molybdopterin oxidoreductase YP_003122072.1 2925902 R 485918 CDS YP_003122073.1 256421420 8358536 complement(2929471..2930775) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_0186 major facilitator transporter; major facilitator superfamily protein 2930775 8358536 Cpin_2381 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003122073.1 2929471 R 485918 CDS YP_003122074.1 256421421 8358537 complement(2930942..2932261) 1 NC_013132.1 KEGG: net:Neut_1053 hypothetical protein; hypothetical protein 2932261 8358537 Cpin_2382 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122074.1 2930942 R 485918 CDS YP_003122075.1 256421422 8358538 complement(2932358..2932726) 1 NC_013132.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: pca:Pcar_2879 nitrite reductase (NAD(P)H)subunit; nitrite reductase (NAD(P)H) small subunit 2932726 8358538 Cpin_2383 Chitinophaga pinensis DSM 2588 nitrite reductase (NAD(P)H) small subunit YP_003122075.1 2932358 R 485918 CDS YP_003122076.1 256421423 8358539 complement(2932751..2935243) 1 NC_013132.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: rpi:Rpic_4164 nitrite reductase (NAD(P)H), large subunit; nitrite reductase (NAD(P)H) large subunit 2935243 8358539 Cpin_2384 Chitinophaga pinensis DSM 2588 nitrite reductase (NAD(P)H) large subunit YP_003122076.1 2932751 R 485918 CDS YP_003122077.1 256421424 8358540 2935466..2936224 1 NC_013132.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bce:BC1426 uroporphyrin-III C- methyltransferase; uroporphyrin-III C-methyltransferase 2936224 8358540 Cpin_2385 Chitinophaga pinensis DSM 2588 uroporphyrin-III C-methyltransferase YP_003122077.1 2935466 D 485918 CDS YP_003122078.1 256421425 8358541 2936211..2936903 1 NC_013132.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mmw:Mmwyl1_2233 CRP/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator 2936903 8358541 Cpin_2386 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122078.1 2936211 D 485918 CDS YP_003122079.1 256421426 8358542 complement(2936900..2937523) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: cps:CPS_1260 nitrate/nitrite DNA- binding response regulator; LuxR family transcriptional regulator 2937523 8358542 Cpin_2387 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003122079.1 2936900 R 485918 CDS YP_003122080.1 256421427 8358543 complement(2937543..2939504) 1 NC_013132.1 KEGG: rme:Rmet_0092 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; histidine kinase 2939504 8358543 Cpin_2388 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122080.1 2937543 R 485918 CDS YP_003122081.1 256421428 8358544 complement(2940013..2942199) 1 NC_013132.1 PFAM: catalase domain protein; ThiJ/PfpI domain protein; KEGG: psa:PST_0039 hydroperoxidase II; catalase 2942199 8358544 Cpin_2389 Chitinophaga pinensis DSM 2588 catalase YP_003122081.1 2940013 R 485918 CDS YP_003122082.1 256421429 8358545 complement(2942247..2942837) 1 NC_013132.1 PFAM: protein of unknown function DUF892; KEGG: bra:BRADO3239 hypothetical protein; hypothetical protein 2942837 8358545 Cpin_2390 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122082.1 2942247 R 485918 CDS YP_003122083.1 256421430 8358546 complement(2943048..2943479) 1 NC_013132.1 KEGG: sus:Acid_5657 hypothetical protein; hypothetical protein 2943479 8358546 Cpin_2391 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122083.1 2943048 R 485918 CDS YP_003122084.1 256421431 8358547 2943668..2946895 1 NC_013132.1 KEGG: vha:VIBHAR_02923 hypothetical protein; hypothetical protein 2946895 8358547 Cpin_2392 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122084.1 2943668 D 485918 CDS YP_003122085.1 256421432 8358548 complement(2947092..2948396) 1 NC_013132.1 KEGG: bba:Bd2932 hypothetical protein; hypothetical protein 2948396 8358548 Cpin_2393 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122085.1 2947092 R 485918 CDS YP_003122086.1 256421433 8358549 complement(2948589..2949650) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2949650 8358549 Cpin_2394 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122086.1 2948589 R 485918 CDS YP_003122087.1 256421434 8358550 complement(2949647..2950246) 1 NC_013132.1 hypothetical protein 2950246 8358550 Cpin_2395 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122087.1 2949647 R 485918 CDS YP_003122088.1 256421435 8358551 complement(2950246..2950581) 1 NC_013132.1 PFAM: transcriptional regulator PadR family protein; KEGG: sus:Acid_1736 PadR family transcriptional regulator; PadR family transcriptional regulator 2950581 8358551 Cpin_2396 Chitinophaga pinensis DSM 2588 PadR family transcriptional regulator YP_003122088.1 2950246 R 485918 CDS YP_003122089.1 256421436 8358552 2951204..2952409 1 NC_013132.1 PFAM: aminotransferase class I and II; aminotransferase class-III; aromatic amino acid beta- eliminating lyase/threonine aldolase; KEGG: mxa:MXAN_3748 aminotransferase, class II; glycine C-acetyltransferase 2952409 8358552 Cpin_2397 Chitinophaga pinensis DSM 2588 glycine C-acetyltransferase YP_003122089.1 2951204 D 485918 CDS YP_003122090.1 256421437 8358553 2952410..2953591 1 NC_013132.1 KEGG: mxa:MXAN_3747 hypothetical protein; hypothetical protein 2953591 8358553 Cpin_2398 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122090.1 2952410 D 485918 CDS YP_003122091.1 256421438 8358554 2953588..2954571 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4- dehydrorhamnose reductase; KEGG: scl:sce7198 hypothetical protein; NAD-dependent epimerase/dehydratase 2954571 8358554 Cpin_2399 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003122091.1 2953588 D 485918 CDS YP_003122092.1 256421439 8358555 2954603..2955928 1 NC_013132.1 PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: aba:Acid345_2392 inositol-3-phosphate synthase; inositol-3-phosphate synthase 2955928 8358555 Cpin_2400 Chitinophaga pinensis DSM 2588 inositol-3-phosphate synthase YP_003122092.1 2954603 D 485918 CDS YP_003122093.1 256421440 8358556 2955925..2956389 1 NC_013132.1 PFAM: phosphatidylglycerophosphatase A; KEGG: dol:Dole_1265 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 2956389 8358556 Cpin_2401 Chitinophaga pinensis DSM 2588 phosphatidylglycerophosphatase A YP_003122093.1 2955925 D 485918 CDS YP_003122094.1 256421441 8358557 2956386..2956787 1 NC_013132.1 KEGG: mxa:MXAN_0450 CDP-alcohol phosphatidyltransferase family protein; hypothetical protein 2956787 8358557 Cpin_2402 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122094.1 2956386 D 485918 CDS YP_003122095.1 256421442 8358558 2956798..2959344 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 2959344 8358558 Cpin_2403 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122095.1 2956798 D 485918 CDS YP_003122096.1 256421443 8358559 2959367..2960644 1 NC_013132.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sus:Acid_6711 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2960644 8358559 Cpin_2404 Chitinophaga pinensis DSM 2588 CDP-alcohol phosphatidyltransferase YP_003122096.1 2959367 D 485918 CDS YP_003122097.1 256421444 8358560 2960666..2961286 1 NC_013132.1 PFAM: fatty acid hydroxylase; KEGG: msl:Msil_3036 fatty acid hydroxylase; fatty acid hydroxylase 2961286 8358560 Cpin_2405 Chitinophaga pinensis DSM 2588 fatty acid hydroxylase YP_003122097.1 2960666 D 485918 CDS YP_003122098.1 256421445 8358561 2961293..2962243 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mxa:MXAN_0451 PAP2 family protein; PA-phosphatase-like phosphoesterase 2962243 8358561 Cpin_2406 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003122098.1 2961293 D 485918 CDS YP_003122099.1 256421446 8358562 complement(2962233..2963447) 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: rpe:RPE_0115 methyltransferase type 12; hypothetical protein 2963447 8358562 Cpin_2407 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122099.1 2962233 R 485918 CDS YP_003122100.1 256421447 8358563 2963453..2963626 1 NC_013132.1 hypothetical protein 2963626 8358563 Cpin_2408 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122100.1 2963453 D 485918 CDS YP_003122101.1 256421448 8358564 2963786..2964478 1 NC_013132.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ade:Adeh_0361 molybdopterin-binding oxidoreductase; molybdopterin binding oxidoreductase 2964478 8358564 Cpin_2409 Chitinophaga pinensis DSM 2588 molybdopterin binding oxidoreductase YP_003122101.1 2963786 D 485918 CDS YP_003122102.1 256421449 8358565 complement(2964890..2966485) 1 NC_013132.1 hypothetical protein 2966485 8358565 Cpin_2410 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122102.1 2964890 R 485918 CDS YP_003122103.1 256421450 8358566 complement(2966542..2968449) 1 NC_013132.1 SMART: AAA ATPase; DEAD-like helicase; KEGG: mxa:MXAN_5972 DNA helicase; ATPase AAA 2968449 8358566 Cpin_2411 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003122103.1 2966542 R 485918 CDS YP_003122104.1 256421451 8358567 2968534..2969136 1 NC_013132.1 hypothetical protein 2969136 8358567 Cpin_2412 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122104.1 2968534 D 485918 CDS YP_003122105.1 256421452 8358568 complement(2969182..2970180) 1 NC_013132.1 hypothetical protein 2970180 8358568 Cpin_2413 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122105.1 2969182 R 485918 CDS YP_003122106.1 256421453 8358569 2970477..2971079 1 NC_013132.1 KEGG: hch:HCH_04271 hypothetical protein; hypothetical protein 2971079 8358569 Cpin_2414 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122106.1 2970477 D 485918 CDS YP_003122107.1 256421454 8358570 2971214..2972011 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: lip:LI0288 PAP2 superfamily protein; PA-phosphatase-like phosphoesterase 2972011 8358570 Cpin_2415 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003122107.1 2971214 D 485918 CDS YP_003122108.1 256421455 8358571 complement(2972208..2972735) 1 NC_013132.1 hypothetical protein 2972735 8358571 Cpin_2416 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122108.1 2972208 R 485918 CDS YP_003122109.1 256421456 8358572 complement(2972894..2974171) 1 NC_013132.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: csa:Csal_1162 aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2974171 8358572 Cpin_2417 Chitinophaga pinensis DSM 2588 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_003122109.1 2972894 R 485918 CDS YP_003122110.1 256421457 8358573 complement(2974302..2974685) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: afw:Anae109_3157 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 2974685 8358573 Cpin_2418 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003122110.1 2974302 R 485918 CDS YP_003122111.1 256421458 8358574 2974886..2975893 1 NC_013132.1 TIGRFAM: RNA ligase, DRB0094 family; KEGG: hypothetical protein; RNA ligase, DRB0094 family 2975893 8358574 Cpin_2419 Chitinophaga pinensis DSM 2588 RNA ligase, DRB0094 family YP_003122111.1 2974886 D 485918 CDS YP_003122112.1 256421459 8358575 complement(2976039..2976770) 1 NC_013132.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bce:BC4053 GntR family transcriptional regulator; GntR family transcriptional regulator 2976770 8358575 Cpin_2420 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003122112.1 2976039 R 485918 CDS YP_003122113.1 256421460 8358576 2976940..2979849 1 NC_013132.1 PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; KEGG: aba:Acid345_0644 glycosyl hydrolases 38-like; glycoside hydrolase 2979849 8358576 Cpin_2421 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122113.1 2976940 D 485918 CDS YP_003122114.1 256421461 8358577 2979867..2981723 1 NC_013132.1 KEGG: aba:Acid345_0639 mannose-6-phosphate isomerase-like protein; mannose-6-phosphate isomerase-like protein 2981723 8358577 Cpin_2422 Chitinophaga pinensis DSM 2588 mannose-6-phosphate isomerase-like protein YP_003122114.1 2979867 D 485918 CDS YP_003122115.1 256421462 8358578 2981707..2983020 1 NC_013132.1 TIGRFAM: sugar transporter; PFAM: ABC transporter substrate-binding protein; major facilitator superfamily MFS_1; KEGG: bsu:BSU33960 permease; sugar transporter 2983020 8358578 Cpin_2423 Chitinophaga pinensis DSM 2588 sugar transporter YP_003122115.1 2981707 D 485918 CDS YP_003122116.1 256421463 8358579 2983020..2983871 1 NC_013132.1 PFAM: ROK family protein; KEGG: aba:Acid345_1696 sugar kinase; ROK family protein 2983871 8358579 Cpin_2424 Chitinophaga pinensis DSM 2588 ROK family protein YP_003122116.1 2983020 D 485918 CDS YP_003122117.1 256421464 8358580 complement(2984008..2984574) 1 NC_013132.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: abc:ACICU_01927 dihydrofolate reductase; bifunctional deaminase-reductase domain-containing protein 2984574 8358580 Cpin_2425 Chitinophaga pinensis DSM 2588 bifunctional deaminase-reductase domain-containing protein YP_003122117.1 2984008 R 485918 CDS YP_003122118.1 256421465 8358581 2984716..2985696 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpe:BP2149 AraC family transcriptional regulator; AraC family transcriptional regulator 2985696 8358581 Cpin_2426 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122118.1 2984716 D 485918 CDS YP_003122119.1 256421466 8358582 complement(2985698..2987422) 1 NC_013132.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: azc:AZC_0722 pyruvate dehydrogenase; thiamine pyrophosphate domain-containing TPP-binding protein 2987422 8358582 Cpin_2427 Chitinophaga pinensis DSM 2588 thiamine pyrophosphate domain-containing TPP-binding protein YP_003122119.1 2985698 R 485918 CDS YP_003122120.1 256421467 8358583 2987612..2988067 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppw:PputW619_2736 AraC family transcriptional regulator; AraC family transcriptional regulator 2988067 8358583 Cpin_2428 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122120.1 2987612 D 485918 CDS YP_003122121.1 256421468 8358584 2988300..2989058 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein; short-chain dehydrogenase/reductase SDR 2989058 8358584 Cpin_2429 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122121.1 2988300 D 485918 CDS YP_003122122.1 256421469 8358585 2989799..2990461 1 NC_013132.1 KEGG: dac:Daci_2531 hypothetical protein; hypothetical protein 2990461 8358585 Cpin_2430 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122122.1 2989799 D 485918 CDS YP_003122123.1 256421470 8358586 2990558..2991433 1 NC_013132.1 KEGG: ccs:CCNA_01284 endo-1,4-beta-xylanase; endo-1,4-beta-xylanase 2991433 8358586 Cpin_2431 Chitinophaga pinensis DSM 2588 endo-1,4-beta-xylanase YP_003122123.1 2990558 D 485918 CDS YP_003122124.1 256421471 8358587 2991871..2992158 1 NC_013132.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: afw:Anae109_0577 regulatory protein ArsR; ArsR family transcriptional regulator 2992158 8358587 Cpin_2432 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003122124.1 2991871 D 485918 CDS YP_003122125.1 256421472 8358588 2992249..2992935 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02133 GNAT family acetyltransferase; N-acetyltransferase GCN5 2992935 8358588 Cpin_2433 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122125.1 2992249 D 485918 CDS YP_003122126.1 256421473 8358589 complement(2993013..2994779) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 2994779 8358589 Cpin_2434 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122126.1 2993013 R 485918 CDS YP_003122127.1 256421474 8358590 complement(2994779..2998306) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 2998306 8358590 Cpin_2435 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003122127.1 2994779 R 485918 CDS YP_003122128.1 256421475 8358591 complement(2998361..2999374) 1 NC_013132.1 PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 2999374 8358591 Cpin_2436 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122128.1 2998361 R 485918 CDS YP_003122129.1 256421476 8358592 complement(2999550..2999789) 1 NC_013132.1 hypothetical protein 2999789 8358592 Cpin_2437 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122129.1 2999550 R 485918 CDS YP_003122130.1 256421477 8358594 complement(3000171..3000500) 1 NC_013132.1 hypothetical protein 3000500 8358594 Cpin_2439 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122130.1 3000171 R 485918 CDS YP_003122131.1 256421478 8358596 complement(3000730..3001347) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sus:Acid_2537 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 3001347 8358596 Cpin_2441 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122131.1 3000730 R 485918 CDS YP_003122132.1 256421479 8358597 complement(3001457..3002782) 1 NC_013132.1 PFAM: amino acid permease-associated region; KEGG: sus:Acid_1927 amino acid permease-associated region; amino acid permease-associated protein 3002782 8358597 Cpin_2442 Chitinophaga pinensis DSM 2588 amino acid permease-associated protein YP_003122132.1 3001457 R 485918 CDS YP_003122133.1 256421480 8358598 3003009..3003608 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bbt:BBta_3158 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 3003608 8358598 Cpin_2443 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122133.1 3003009 D 485918 CDS YP_003122134.1 256421481 8358599 3003889..3004848 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family; anti-FecI sigma factor FecR 3004848 8358599 Cpin_2444 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122134.1 3003889 D 485918 CDS YP_003122135.1 256421482 8358600 3004953..3008237 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3008237 8358600 Cpin_2445 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122135.1 3004953 D 485918 CDS YP_003122136.1 256421483 8358601 3008272..3009888 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3009888 8358601 Cpin_2446 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122136.1 3008272 D 485918 CDS YP_003122137.1 256421484 8358603 complement(3010180..3013605) 1 NC_013132.1 PFAM: PA14 domain protein; Ricin B lectin; SMART: PA14 domain protein; Ricin B lectin; beta and gamma crystallin; KEGG: hch:HCH_04441 QXW lectin repeat-containing protein; PA14 domain-containing protein 3013605 8358603 Cpin_2448 Chitinophaga pinensis DSM 2588 PA14 domain-containing protein YP_003122137.1 3010180 R 485918 CDS YP_003122138.1 256421485 8358604 complement(3013892..3014359) 1 NC_013132.1 PFAM: ankyrin; SMART: ankyrin; KEGG: bba:Bd1155 ankyrin domain-containing protein; ankyrin 3014359 8358604 Cpin_2449 Chitinophaga pinensis DSM 2588 ankyrin YP_003122138.1 3013892 R 485918 CDS YP_003122139.1 256421486 8358605 complement(3014658..3015593) 1 NC_013132.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bba:Bd2516 redox-sensitive transcriptional activator; LysR family transcriptional regulator 3015593 8358605 Cpin_2450 Chitinophaga pinensis DSM 2588 LysR family transcriptional regulator YP_003122139.1 3014658 R 485918 CDS YP_003122140.1 256421487 8358606 complement(3015712..3016179) 1 NC_013132.1 PFAM: ankyrin; SMART: ankyrin; KEGG: swi:Swit_5249 ankyrin; ankyrin 3016179 8358606 Cpin_2451 Chitinophaga pinensis DSM 2588 ankyrin YP_003122140.1 3015712 R 485918 CDS YP_003122141.1 256421488 8358610 3016810..3017496 1 NC_013132.1 hypothetical protein 3017496 8358610 Cpin_2452 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122141.1 3016810 D 485918 CDS YP_003122142.1 256421489 8358611 complement(3017505..3019178) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: slo:Shew_1895 redoxin domain-containing protein; alkyl hydroperoxide reductase 3019178 8358611 Cpin_2453 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122142.1 3017505 R 485918 CDS YP_003122143.1 256421490 8358612 3019650..3019895 1 NC_013132.1 hypothetical protein 3019895 8358612 Cpin_2454 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122143.1 3019650 D 485918 CDS YP_003122144.1 256421491 8358613 3020010..3021224 1 NC_013132.1 hypothetical protein 3021224 8358613 Cpin_2455 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122144.1 3020010 D 485918 CDS YP_003122145.1 256421492 8358614 3021236..3021694 1 NC_013132.1 hypothetical protein 3021694 8358614 Cpin_2456 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122145.1 3021236 D 485918 CDS YP_003122146.1 256421493 8358615 3021709..3023979 1 NC_013132.1 KEGG: scl:sce4071 alpha-2-macroglobulin; hypothetical protein 3023979 8358615 Cpin_2457 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122146.1 3021709 D 485918 CDS YP_003122147.1 256421494 8358616 3023992..3026718 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3026718 8358616 Cpin_2458 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122147.1 3023992 D 485918 CDS YP_003122148.1 256421495 8358617 3026722..3027501 1 NC_013132.1 hypothetical protein 3027501 8358617 Cpin_2459 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122148.1 3026722 D 485918 CDS YP_003122149.1 256421496 8358618 3027519..3028607 1 NC_013132.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: nma:NMA0976 signal peptidase I; signal peptidase I 3028607 8358618 Cpin_2460 Chitinophaga pinensis DSM 2588 signal peptidase I YP_003122149.1 3027519 D 485918 CDS YP_003122150.1 256421497 8358619 3028604..3030346 1 NC_013132.1 PFAM: O-antigen polymerase; KEGG: pin:Ping_0368 O-antigen polymerase; O-antigen polymerase 3030346 8358619 Cpin_2461 Chitinophaga pinensis DSM 2588 O-antigen polymerase YP_003122150.1 3028604 D 485918 CDS YP_003122151.1 256421498 8358620 3030358..3033078 1 NC_013132.1 KEGG: sde:Sde_1703 hypothetical protein; hypothetical protein 3033078 8358620 Cpin_2462 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122151.1 3030358 D 485918 CDS YP_003122152.1 256421499 8358621 3033120..3033845 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sun:SUN_0333 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3033845 8358621 Cpin_2463 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122152.1 3033120 D 485918 CDS YP_003122153.1 256421500 8358622 3033993..3036371 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_3505 ABC transporter, permease protein; hypothetical protein 3036371 8358622 Cpin_2464 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122153.1 3033993 D 485918 CDS YP_003122154.1 256421501 8358623 complement(3036448..3039861) 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: heme-binding protein; PFAM: PBS lyase HEAT domain protein repeat- containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein; heme-binding protein 3039861 8358623 Cpin_2465 Chitinophaga pinensis DSM 2588 heme-binding protein YP_003122154.1 3036448 R 485918 CDS YP_003122155.1 256421502 8358624 complement(3040031..3040675) 1 NC_013132.1 KEGG: bba:Bd3619 hypothetical protein; hypothetical protein 3040675 8358624 Cpin_2466 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122155.1 3040031 R 485918 CDS YP_003122156.1 256421503 8358625 complement(3040712..3041236) 1 NC_013132.1 KEGG: sus:Acid_1844 hypothetical protein; hypothetical protein 3041236 8358625 Cpin_2467 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122156.1 3040712 R 485918 CDS YP_003122157.1 256421504 8358626 3041315..3041494 1 NC_013132.1 hypothetical protein 3041494 8358626 Cpin_2468 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122157.1 3041315 D 485918 CDS YP_003122158.1 256421505 8358627 3041550..3044660 1 NC_013132.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: aba:Acid345_4484 glycoside hydrolase family 2, TIM barrel; glycoside hydrolase 3044660 8358627 Cpin_2469 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122158.1 3041550 D 485918 CDS YP_003122159.1 256421506 8358628 3044838..3047222 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ppw:PputW619_2891 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3047222 8358628 Cpin_2470 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003122159.1 3044838 D 485918 CDS YP_003122160.1 256421507 8358629 complement(3047269..3048207) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_5330 aldo/keto reductase; aldo/keto reductase 3048207 8358629 Cpin_2471 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003122160.1 3047269 R 485918 CDS YP_003122161.1 256421508 8358630 3048324..3048977 1 NC_013132.1 KEGG: bja:bll0118 hypothetical protein; hypothetical protein 3048977 8358630 Cpin_2472 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122161.1 3048324 D 485918 CDS YP_003122162.1 256421509 8358631 3049029..3049571 1 NC_013132.1 KEGG: aba:Acid345_1351 hypothetical protein; hypothetical protein 3049571 8358631 Cpin_2473 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122162.1 3049029 D 485918 CDS YP_003122163.1 256421510 8358632 complement(3049625..3050146) 1 NC_013132.1 PFAM: DinB family protein; KEGG: bha:BH3115 nuclease inhibitor; DinB family protein 3050146 8358632 Cpin_2474 Chitinophaga pinensis DSM 2588 DinB family protein YP_003122163.1 3049625 R 485918 CDS YP_003122164.1 256421511 8358633 complement(3050130..3050624) 1 NC_013132.1 PFAM: PEBP family protein; KEGG: eta:ETA_22690 hypothetical protein; PEBP family protein 3050624 8358633 Cpin_2475 Chitinophaga pinensis DSM 2588 PEBP family protein YP_003122164.1 3050130 R 485918 CDS YP_003122165.1 256421512 8358634 complement(3050719..3051579) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abu:Abu_1051 AraC family transcriptional regulator; AraC family transcriptional regulator 3051579 8358634 Cpin_2476 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122165.1 3050719 R 485918 CDS YP_003122166.1 256421513 8358635 3052235..3052711 1 NC_013132.1 KEGG: hch:HCH_01285 acyltransferase; acyltransferase 3052711 8358635 Cpin_2477 Chitinophaga pinensis DSM 2588 acyltransferase YP_003122166.1 3052235 D 485918 CDS YP_003122167.1 256421514 8358636 complement(3052767..3053708) 1 NC_013132.1 hypothetical protein 3053708 8358636 Cpin_2478 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122167.1 3052767 R 485918 CDS YP_003122168.1 256421515 8358637 complement(3054337..3054561) 1 NC_013132.1 hypothetical protein 3054561 8358637 Cpin_2479 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122168.1 3054337 R 485918 CDS YP_003122169.1 256421516 8358638 complement(3054598..3055101) 1 NC_013132.1 hypothetical protein 3055101 8358638 Cpin_2480 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122169.1 3054598 R 485918 CDS YP_003122170.1 256421517 8358639 3055246..3055908 1 NC_013132.1 hypothetical protein 3055908 8358639 Cpin_2481 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122170.1 3055246 D 485918 CDS YP_003122171.1 256421518 8358640 3055939..3057093 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein; glycoside hydrolase 3057093 8358640 Cpin_2482 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122171.1 3055939 D 485918 CDS YP_003122172.1 256421519 8358641 3057263..3058777 1 NC_013132.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_3092 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter 3058777 8358641 Cpin_2483 Chitinophaga pinensis DSM 2588 EmrB/QacA subfamily drug resistance transporter YP_003122172.1 3057263 D 485918 CDS YP_003122173.1 256421520 8358642 complement(3058801..3060399) 1 NC_013132.1 KEGG: xca:xccb100_4421 exported conserved hypothetical protein; hypothetical protein 3060399 8358642 Cpin_2484 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122173.1 3058801 R 485918 CDS YP_003122174.1 256421521 8358643 3060502..3061071 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein; Crp/Fnr family transcriptional regulator 3061071 8358643 Cpin_2485 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122174.1 3060502 D 485918 CDS YP_003122175.1 256421522 8358644 complement(3061045..3062502) 1 NC_013132.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aba:Acid345_4430 apolipoprotein N- acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 3062502 8358644 Cpin_2486 Chitinophaga pinensis DSM 2588 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003122175.1 3061045 R 485918 CDS YP_003122176.1 256421523 8358645 complement(3062705..3064093) 1 NC_013132.1 SMART: hypothetical protein; KEGG: scl:sce0710 hypothetical protein; hypothetical protein 3064093 8358645 Cpin_2487 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122176.1 3062705 R 485918 CDS YP_003122177.1 256421524 8358646 3064384..3064887 1 NC_013132.1 hypothetical protein 3064887 8358646 Cpin_2488 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122177.1 3064384 D 485918 CDS YP_003122178.1 256421525 8358647 3065043..3065582 1 NC_013132.1 hypothetical protein 3065582 8358647 Cpin_2489 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122178.1 3065043 D 485918 CDS YP_003122179.1 256421526 8358648 3065750..3066715 1 NC_013132.1 KEGG: rfr:Rfer_3496 hypothetical protein; hypothetical protein 3066715 8358648 Cpin_2490 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122179.1 3065750 D 485918 CDS YP_003122180.1 256421527 8358649 3066852..3067007 1 NC_013132.1 hypothetical protein 3067007 8358649 Cpin_2491 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122180.1 3066852 D 485918 CDS YP_003122181.1 256421528 8358650 3067113..3068168 1 NC_013132.1 PFAM: protein of unknown function DUF692; KEGG: scl:sce0141 hypothetical protein; hypothetical protein 3068168 8358650 Cpin_2492 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122181.1 3067113 D 485918 CDS YP_003122182.1 256421529 8358651 complement(3068270..3068797) 1 NC_013132.1 hypothetical protein 3068797 8358651 Cpin_2493 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122182.1 3068270 R 485918 CDS YP_003122183.1 256421530 8358652 complement(3068835..3069215) 1 NC_013132.1 hypothetical protein 3069215 8358652 Cpin_2494 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122183.1 3068835 R 485918 CDS YP_003122184.1 256421531 8358653 3069382..3071187 1 NC_013132.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: har:HEAR2198 site-specific DNA- methyltransferase (adenine-specific); DNA methylase N-4/N-6 domain-containing protein 3071187 8358653 Cpin_2495 Chitinophaga pinensis DSM 2588 DNA methylase N-4/N-6 domain-containing protein YP_003122184.1 3069382 D 485918 CDS YP_003122185.1 256421532 8358654 3071278..3073635 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mno:Mnod_8274 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3073635 8358654 Cpin_2496 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003122185.1 3071278 D 485918 CDS YP_003122186.1 256421533 8358655 3073910..3074965 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: gbe:GbCGDNIH1_0742 acyltransferase family; acyltransferase 3 3074965 8358655 Cpin_2497 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003122186.1 3073910 D 485918 CDS YP_003122187.1 256421534 8358656 complement(3075100..3075402) 1 NC_013132.1 KEGG: maq:Maqu_2862 hypothetical protein; hypothetical protein 3075402 8358656 Cpin_2498 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122187.1 3075100 R 485918 CDS YP_003122188.1 256421535 8358657 complement(3075624..3075881) 1 NC_013132.1 hypothetical protein 3075881 8358657 Cpin_2499 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122188.1 3075624 R 485918 CDS YP_003122189.1 256421536 8358658 3076074..3076502 1 NC_013132.1 KEGG: sbn:Sbal195_1727 hypothetical protein; hypothetical protein 3076502 8358658 Cpin_2500 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122189.1 3076074 D 485918 CDS YP_003122190.1 256421537 8358659 3076829..3078805 1 NC_013132.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: cvi:CV_3101 benzoylformate decarboxylase; thiamine pyrophosphate domain-containing TPP-binding protein 3078805 8358659 Cpin_2501 Chitinophaga pinensis DSM 2588 thiamine pyrophosphate domain-containing TPP-binding protein YP_003122190.1 3076829 D 485918 CDS YP_003122191.1 256421538 8358660 3078819..3080492 1 NC_013132.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cvi:CV_3102 hypothetical protein; amine oxidase 3080492 8358660 Cpin_2502 Chitinophaga pinensis DSM 2588 amine oxidase YP_003122191.1 3078819 D 485918 CDS YP_003122192.1 256421539 8358661 complement(3080604..3081005) 1 NC_013132.1 hypothetical protein 3081005 8358661 Cpin_2503 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122192.1 3080604 R 485918 CDS YP_003122193.1 256421540 8358662 complement(3081046..3081552) 1 NC_013132.1 hypothetical protein 3081552 8358662 Cpin_2504 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122193.1 3081046 R 485918 CDS YP_003122194.1 256421541 8358663 complement(3081558..3081713) 1 NC_013132.1 hypothetical protein 3081713 8358663 Cpin_2505 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122194.1 3081558 R 485918 CDS YP_003122195.1 256421542 8358664 complement(3081806..3082576) 1 NC_013132.1 hypothetical protein 3082576 8358664 Cpin_2506 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122195.1 3081806 R 485918 CDS YP_003122196.1 256421543 8358665 3083086..3084372 1 NC_013132.1 KEGG: sml:Smlt3699 hypothetical protein; hypothetical protein 3084372 8358665 Cpin_2507 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122196.1 3083086 D 485918 CDS YP_003122197.1 256421544 8358666 complement(3084490..3085167) 1 NC_013132.1 hypothetical protein 3085167 8358666 Cpin_2508 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122197.1 3084490 R 485918 CDS YP_003122198.1 256421545 8358667 3085389..3086222 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_5171 transcriptional regulator PobR; AraC family transcriptional regulator 3086222 8358667 Cpin_2509 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122198.1 3085389 D 485918 CDS YP_003122199.1 256421546 8358668 3086695..3087852 1 NC_013132.1 KEGG: bra:BRADO6402 hypothetical protein; hypothetical protein 3087852 8358668 Cpin_2510 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122199.1 3086695 D 485918 CDS YP_003122200.1 256421547 8358670 complement(3089122..3089541) 1 NC_013132.1 hypothetical protein 3089541 8358670 Cpin_2512 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122200.1 3089122 R 485918 CDS YP_003122201.1 256421548 8358672 complement(3090501..3091052) 1 NC_013132.1 hypothetical protein 3091052 8358672 Cpin_2514 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122201.1 3090501 R 485918 CDS YP_003122202.1 256421549 8358675 complement(3093438..3094613) 1 NC_013132.1 KEGG: 235 kDa rhoptry protein; hypothetical protein 3094613 8358675 Cpin_2517 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122202.1 3093438 R 485918 CDS YP_003122203.1 256421550 8358677 3095599..3096612 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bpy:Bphyt_6177 alpha/beta hydrolase; alpha/beta hydrolase 3096612 8358677 Cpin_2518 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003122203.1 3095599 D 485918 CDS YP_003122204.1 256421551 8358678 complement(3096690..3097361) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3097361 8358678 Cpin_2519 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122204.1 3096690 R 485918 CDS YP_003122205.1 256421552 8358679 3097539..3097892 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: msl:Msil_2802 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 3097892 8358679 Cpin_2520 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122205.1 3097539 D 485918 CDS YP_003122206.1 256421553 8358680 3097913..3098311 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: ppr:PBPRB0736 hypothetical protein; NUDIX hydrolase 3098311 8358680 Cpin_2521 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003122206.1 3097913 D 485918 CDS YP_003122207.1 256421554 8358681 complement(3098462..3099304) 1 NC_013132.1 PFAM: methyltransferase type 11; Cyclopropane-fatty- acyl-phospholipid synthase; methyltransferase type 12; methyltransferase; KEGG: hne:HNE_0921 hypothetical protein; type 11 methyltransferase 3099304 8358681 Cpin_2522 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003122207.1 3098462 R 485918 CDS YP_003122208.1 256421555 8358682 3099507..3100076 1 NC_013132.1 PFAM: NLP/P60 protein; KEGG: ppr:PBPRA1436 cell wall-associated hydrolase; NLP/P60 protein 3100076 8358682 Cpin_2523 Chitinophaga pinensis DSM 2588 NLP/P60 protein YP_003122208.1 3099507 D 485918 CDS YP_003122209.1 256421556 8358683 complement(3100090..3100581) 1 NC_013132.1 hypothetical protein 3100581 8358683 Cpin_2524 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122209.1 3100090 R 485918 CDS YP_003122210.1 256421557 8358684 3100794..3100910 1 NC_013132.1 hypothetical protein 3100910 8358684 Cpin_2525 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122210.1 3100794 D 485918 CDS YP_003122211.1 256421558 8358685 3100988..3102205 1 NC_013132.1 PFAM: glucose sorbosone dehydrogenase; KEGG: cak:Caul_0825 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 3102205 8358685 Cpin_2526 Chitinophaga pinensis DSM 2588 glucose sorbosone dehydrogenase YP_003122211.1 3100988 D 485918 CDS YP_003122212.1 256421559 8358686 3102473..3102784 1 NC_013132.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: nwi:Nwi_2139 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3102784 8358686 Cpin_2527 Chitinophaga pinensis DSM 2588 antibiotic biosynthesis monooxygenase YP_003122212.1 3102473 D 485918 CDS YP_003122213.1 256421560 8358687 3103167..3104084 1 NC_013132.1 KEGG: cja:CJA_1544 dienelactone hydrolase domain protein; dienelactone hydrolase domain-containing protein 3104084 8358687 Cpin_2528 Chitinophaga pinensis DSM 2588 dienelactone hydrolase domain-containing protein YP_003122213.1 3103167 D 485918 CDS YP_003122214.1 256421561 8358688 3104132..3105070 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 3105070 8358688 Cpin_2529 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122214.1 3104132 D 485918 CDS YP_003122215.1 256421562 8358689 complement(3105222..3105572) 1 NC_013132.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: cak:Caul_5271 ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 3105572 8358689 Cpin_2530 Chitinophaga pinensis DSM 2588 ethyl tert-butyl ether degradation EthD YP_003122215.1 3105222 R 485918 CDS YP_003122216.1 256421563 8358690 3105682..3106053 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: gox:GOX2595 hypothetical protein; HxlR family transcriptional regulator 3106053 8358690 Cpin_2531 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122216.1 3105682 D 485918 CDS YP_003122217.1 256421564 8358691 complement(3106171..3108483) 1 NC_013132.1 KEGG: Eapa2; experimental autoimmune prostatitis antigen 2; hypothetical protein 3108483 8358691 Cpin_2532 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122217.1 3106171 R 485918 CDS YP_003122218.1 256421565 8358692 complement(3108831..3109064) 1 NC_013132.1 hypothetical protein 3109064 8358692 Cpin_2533 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122218.1 3108831 R 485918 CDS YP_003122219.1 256421566 8358693 3109369..3109578 1 NC_013132.1 hypothetical protein 3109578 8358693 Cpin_2534 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122219.1 3109369 D 485918 CDS YP_003122220.1 256421567 8358694 3109744..3110070 1 NC_013132.1 hypothetical protein 3110070 8358694 Cpin_2535 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122220.1 3109744 D 485918 CDS YP_003122221.1 256421568 8358695 3110553..3110708 1 NC_013132.1 hypothetical protein 3110708 8358695 Cpin_2536 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122221.1 3110553 D 485918 CDS YP_003122222.1 256421569 8358696 complement(3110664..3110927) 1 NC_013132.1 KEGG: cja:CJA_3824 conserved hypothetical protein TIGR00278; hypothetical protein 3110927 8358696 Cpin_2537 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122222.1 3110664 R 485918 CDS YP_003122223.1 256421570 8358697 complement(3110931..3111158) 1 NC_013132.1 hypothetical protein 3111158 8358697 Cpin_2538 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122223.1 3110931 R 485918 CDS YP_003122224.1 256421571 8358698 complement(3111313..3111477) 1 NC_013132.1 hypothetical protein 3111477 8358698 Cpin_2539 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122224.1 3111313 R 485918 CDS YP_003122225.1 256421572 8358699 complement(3112019..3112309) 1 NC_013132.1 hypothetical protein 3112309 8358699 Cpin_2540 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122225.1 3112019 R 485918 CDS YP_003122226.1 256421573 8358700 complement(3112348..3112779) 1 NC_013132.1 KEGG: afw:Anae109_1352 DoxX family protein; hypothetical protein 3112779 8358700 Cpin_2541 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122226.1 3112348 R 485918 CDS YP_003122227.1 256421574 8358701 complement(3112791..3114134) 1 NC_013132.1 PFAM: aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; KEGG: hypothetical protein; serine/threonine protein kinase 3114134 8358701 Cpin_2542 Chitinophaga pinensis DSM 2588 serine/threonine protein kinase YP_003122227.1 3112791 R 485918 CDS YP_003122228.1 256421575 8358702 3114746..3115681 1 NC_013132.1 hypothetical protein 3115681 8358702 Cpin_2543 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122228.1 3114746 D 485918 CDS YP_003122229.1 256421576 8358703 complement(3115796..3116074) 1 NC_013132.1 hypothetical protein 3116074 8358703 Cpin_2544 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122229.1 3115796 R 485918 CDS YP_003122230.1 256421577 8358704 complement(3116059..3116451) 1 NC_013132.1 KEGG: bac:BamMC406_0385 hypothetical protein; hypothetical protein 3116451 8358704 Cpin_2545 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122230.1 3116059 R 485918 CDS YP_003122231.1 256421578 8358705 complement(3116555..3117379) 1 NC_013132.1 PFAM: integrase catalytic region; KEGG: mgm:Mmc1_2644 integrase, catalytic region; integrase catalytic subunit 3117379 8358705 Cpin_2546 Chitinophaga pinensis DSM 2588 integrase catalytic subunit YP_003122231.1 3116555 R 485918 CDS YP_003122232.1 256421579 8358706 complement(3117412..3117729) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: dps:DP1713 transposase; transposase IS3/IS911 family protein 3117729 8358706 Cpin_2547 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003122232.1 3117412 R 485918 CDS YP_003122233.1 256421580 8358707 complement(3118043..3118975) 1 NC_013132.1 KEGG: bha:BH3213 hypothetical protein; hypothetical protein 3118975 8358707 Cpin_2548 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122233.1 3118043 R 485918 CDS YP_003122234.1 256421581 8358708 complement(3119022..3120044) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3214 ABC transporter ATP-binding protein; ABC transporter 3120044 8358708 Cpin_2549 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122234.1 3119022 R 485918 CDS YP_003122235.1 256421582 8358709 complement(3120090..3120956) 1 NC_013132.1 KEGG: bha:BH3215 hypothetical protein; hypothetical protein 3120956 8358709 Cpin_2550 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122235.1 3120090 R 485918 CDS YP_003122236.1 256421583 8358710 complement(3121653..3121850) 1 NC_013132.1 hypothetical protein 3121850 8358710 Cpin_2551 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122236.1 3121653 R 485918 CDS YP_003122237.1 256421584 8358711 complement(3121825..3122298) 1 NC_013132.1 hypothetical protein 3122298 8358711 Cpin_2552 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122237.1 3121825 R 485918 CDS YP_003122238.1 256421585 8358713 complement(3124706..3125203) 1 NC_013132.1 hypothetical protein 3125203 8358713 Cpin_2554 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122238.1 3124706 R 485918 CDS YP_003122239.1 256421586 8358714 complement(3125184..3125972) 1 NC_013132.1 hypothetical protein 3125972 8358714 Cpin_2555 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122239.1 3125184 R 485918 CDS YP_003122240.1 256421587 8358715 3126201..3126518 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: dde:Dde_1745 transposase-like; transposase IS3/IS911 family protein 3126518 8358715 Cpin_2556 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003122240.1 3126201 D 485918 CDS YP_003122241.1 256421588 8358716 3126551..3127375 1 NC_013132.1 PFAM: integrase catalytic region; KEGG: net:Neut_2192 integrase catalytic subunit; integrase catalytic subunit 3127375 8358716 Cpin_2557 Chitinophaga pinensis DSM 2588 integrase catalytic subunit YP_003122241.1 3126551 D 485918 CDS YP_003122242.1 256421589 8358717 complement(3128072..3128725) 1 NC_013132.1 hypothetical protein 3128725 8358717 Cpin_2558 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122242.1 3128072 R 485918 CDS YP_003122243.1 256421590 8358718 3129011..3129172 1 NC_013132.1 hypothetical protein 3129172 8358718 Cpin_2559 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122243.1 3129011 D 485918 CDS YP_003122244.1 256421591 8358719 3129238..3129459 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: wpi:WPa_0273 transcriptional regulator; XRE family transcriptional regulator 3129459 8358719 Cpin_2560 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003122244.1 3129238 D 485918 CDS YP_003122245.1 256421592 8358720 3129459..3129881 1 NC_013132.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: ppg:PputGB1_4747 DNA mismatch endonuclease Vsr; DNA mismatch endonuclease Vsr 3129881 8358720 Cpin_2561 Chitinophaga pinensis DSM 2588 DNA mismatch endonuclease Vsr YP_003122245.1 3129459 D 485918 CDS YP_003122246.1 256421593 8358721 3129868..3131139 1 NC_013132.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: cco:CCC13826_0819 modification methylase HaeIII (cytosine-specificmethyltransferase HaeIII; M.HaeIII); DNA-cytosine methyltransferase 3131139 8358721 Cpin_2562 Chitinophaga pinensis DSM 2588 DNA-cytosine methyltransferase YP_003122246.1 3129868 D 485918 CDS YP_003122247.1 256421594 8358722 3131202..3132350 1 NC_013132.1 KEGG: smd:Smed_3342 thymidine phosphorylase; thymidine phosphorylase 3132350 8358722 Cpin_2563 Chitinophaga pinensis DSM 2588 thymidine phosphorylase YP_003122247.1 3131202 D 485918 CDS YP_003122248.1 256421595 8358723 3132337..3136044 1 NC_013132.1 KEGG: rpi:Rpic_2931 hypothetical protein; hypothetical protein 3136044 8358723 Cpin_2564 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122248.1 3132337 D 485918 CDS YP_003122249.1 256421596 8358724 3136055..3138445 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: azo:azo0358 two-component sensor kinase; histidine kinase 3138445 8358724 Cpin_2565 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122249.1 3136055 D 485918 CDS YP_003122250.1 256421597 8358725 3138512..3139828 1 NC_013132.1 hypothetical protein 3139828 8358725 Cpin_2566 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122250.1 3138512 D 485918 CDS YP_003122251.1 256421598 8358726 complement(3140151..3140381) 1 NC_013132.1 hypothetical protein 3140381 8358726 Cpin_2567 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122251.1 3140151 R 485918 CDS YP_003122252.1 256421599 8358727 3140852..3141793 1 NC_013132.1 KEGG: bca:BCE_A0214 sensor histidine kinase; hypothetical protein 3141793 8358727 Cpin_2568 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122252.1 3140852 D 485918 CDS YP_003122253.1 256421600 8358728 3141936..3142340 1 NC_013132.1 response regulator receiver protein 3142340 8358728 Cpin_2569 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003122253.1 3141936 D 485918 CDS YP_003122254.1 256421601 8358729 3142347..3142922 1 NC_013132.1 hypothetical protein 3142922 8358729 Cpin_2570 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122254.1 3142347 D 485918 CDS YP_003122255.1 256421602 8358730 3143670..3143927 1 NC_013132.1 hypothetical protein 3143927 8358730 Cpin_2571 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122255.1 3143670 D 485918 CDS YP_003122256.1 256421603 8358731 3143869..3145488 1 NC_013132.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase; resolvase domain-containing protein 3145488 8358731 Cpin_2572 Chitinophaga pinensis DSM 2588 resolvase domain-containing protein YP_003122256.1 3143869 D 485918 CDS YP_003122257.1 256421604 8358733 complement(3145543..3148170) 1 NC_013132.1 KEGG: sfu:Sfum_2351 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase 3148170 8358733 Cpin_2573 Chitinophaga pinensis DSM 2588 malto-oligosyltrehalose synthase YP_003122257.1 3145543 R 485918 CDS YP_003122258.1 256421605 8358734 complement(3148157..3149989) 1 NC_013132.1 KEGG: sfu:Sfum_2349 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 3149989 8358734 Cpin_2574 Chitinophaga pinensis DSM 2588 malto-oligosyltrehalose trehalohydrolase YP_003122258.1 3148157 R 485918 CDS YP_003122259.1 256421606 8358735 3150198..3152012 1 NC_013132.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: aba:Acid345_2519 alpha amylase; alpha amylase 3152012 8358735 Cpin_2575 Chitinophaga pinensis DSM 2588 alpha amylase YP_003122259.1 3150198 D 485918 CDS YP_003122260.1 256421607 8358736 3152090..3154222 1 NC_013132.1 KEGG: noc:Noc_1740 glycogen debranching protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 3154222 8358736 Cpin_2576 Chitinophaga pinensis DSM 2588 glycogen debranching protein GlgX YP_003122260.1 3152090 D 485918 CDS YP_003122261.1 256421608 8358737 complement(3154219..3154728) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A3517 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 3154728 8358737 Cpin_2577 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122261.1 3154219 R 485918 CDS YP_003122262.1 256421609 8358738 3154792..3155298 1 NC_013132.1 PFAM: Domain of unknown function DUF1905; KEGG: sde:Sde_3068 hypothetical protein; hypothetical protein 3155298 8358738 Cpin_2578 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122262.1 3154792 D 485918 CDS YP_003122263.1 256421610 8358739 3155327..3156160 1 NC_013132.1 SMART: RNA binding S1 domain protein; KEGG: pin:Ping_1452 RNA-binding S1 domain- containing protein; RNA binding S1 domain-containing protein 3156160 8358739 Cpin_2579 Chitinophaga pinensis DSM 2588 RNA binding S1 domain-containing protein YP_003122263.1 3155327 D 485918 CDS YP_003122264.1 256421611 8358740 3156512..3159859 1 NC_013132.1 PFAM: glycoside hydrolase family 18; glycoside hydrolase family 5; SMART: chitinase II; KEGG: hch:HCH_05453 chitinase; glycoside hydrolase 3159859 8358740 Cpin_2580 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122264.1 3156512 D 485918 CDS YP_003122265.1 256421612 8358741 3160022..3161476 1 NC_013132.1 KEGG: cja:CJA_0276 carbohydrate binding protein, , cbp6B; hypothetical protein 3161476 8358741 Cpin_2581 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122265.1 3160022 D 485918 CDS YP_003122266.1 256421613 8358742 complement(3161553..3162692) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mxa:MXAN_6178 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3162692 8358742 Cpin_2582 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003122266.1 3161553 R 485918 CDS YP_003122267.1 256421614 8358743 complement(3162670..3165888) 1 NC_013132.1 PFAM: acriflavin resistance protein; KEGG: mxa:MXAN_6177 efflux transporter, AcrB/AcrD/AcrF family, inner membrane component; acriflavin resistance protein 3165888 8358743 Cpin_2583 Chitinophaga pinensis DSM 2588 acriflavin resistance protein YP_003122267.1 3162670 R 485918 CDS YP_003122268.1 256421615 8358744 complement(3165893..3167293) 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_6176 outer membrane efflux protein; outer membrane efflux protein 3167293 8358744 Cpin_2584 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003122268.1 3165893 R 485918 CDS YP_003122269.1 256421616 8358745 complement(3167324..3168658) 1 NC_013132.1 PFAM: histidine kinase A domain protein; ATP- binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; ATP- binding region ATPase domain protein; KEGG: rme:Rmet_5673 heavy metal sensor signal transduction histidine kinase; histidine kinase 3168658 8358745 Cpin_2585 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122269.1 3167324 R 485918 CDS YP_003122270.1 256421617 8358746 complement(3168655..3169338) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sun:SUN_1067 two-component response regulator; winged helix family two component transcriptional regulator 3169338 8358746 Cpin_2586 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003122270.1 3168655 R 485918 CDS YP_003122271.1 256421618 8358747 complement(3169815..3171773) 1 NC_013132.1 KEGG: rso:RSc0115 hemagglutinin-related protein; hypothetical protein 3171773 8358747 Cpin_2587 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122271.1 3169815 R 485918 CDS YP_003122272.1 256421619 8358748 complement(3171806..3174253) 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sus:Acid_6164 Ig family protein; PKD domain-containing protein 3174253 8358748 Cpin_2588 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003122272.1 3171806 R 485918 CDS YP_003122273.1 256421620 8358749 complement(3174511..3174810) 1 NC_013132.1 hypothetical protein 3174810 8358749 Cpin_2589 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122273.1 3174511 R 485918 CDS YP_003122274.1 256421621 8358750 3174951..3175484 1 NC_013132.1 hypothetical protein 3175484 8358750 Cpin_2590 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122274.1 3174951 D 485918 CDS YP_003122275.1 256421622 8358751 3175611..3176588 1 NC_013132.1 hypothetical protein 3176588 8358751 Cpin_2591 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122275.1 3175611 D 485918 CDS YP_003122276.1 256421623 8358752 3176585..3177757 1 NC_013132.1 KEGG: aba:Acid345_3979 hypothetical protein; hypothetical protein 3177757 8358752 Cpin_2592 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122276.1 3176585 D 485918 CDS YP_003122277.1 256421624 8358753 complement(3177821..3179494) 1 NC_013132.1 KEGG: rde:RD1_B0029 hypothetical protein; hypothetical protein 3179494 8358753 Cpin_2593 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122277.1 3177821 R 485918 CDS YP_003122278.1 256421625 8358754 complement(3179912..3180919) 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: mxa:MXAN_3495 fatty acid desaturase family protein; fatty acid desaturase 3180919 8358754 Cpin_2594 Chitinophaga pinensis DSM 2588 fatty acid desaturase YP_003122278.1 3179912 R 485918 CDS YP_003122279.1 256421626 8358755 complement(3180989..3181894) 1 NC_013132.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: sat:SYN_00133 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 3181894 8358755 Cpin_2595 Chitinophaga pinensis DSM 2588 lipid A biosynthesis acyltransferase YP_003122279.1 3180989 R 485918 CDS YP_003122280.1 256421627 8358756 3182266..3183609 1 NC_013132.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rle:pRL120678 alpha-L-fucosidase; alpha-L-fucosidase 3183609 8358756 Cpin_2596 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003122280.1 3182266 D 485918 CDS YP_003122281.1 256421628 8358757 3183684..3184445 1 NC_013132.1 KEGG: scl:sce5997 ArsR family transcriptional regulator; AraC family transcriptional regulator 3184445 8358757 Cpin_2597 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122281.1 3183684 D 485918 CDS YP_003122282.1 256421629 8358758 3184615..3185313 1 NC_013132.1 hypothetical protein 3185313 8358758 Cpin_2598 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122282.1 3184615 D 485918 CDS YP_003122283.1 256421630 8358759 3185331..3186251 1 NC_013132.1 KEGG: abu:Abu_0902 cytochrome C family protein; cytochrome C family protein 3186251 8358759 Cpin_2599 Chitinophaga pinensis DSM 2588 cytochrome C family protein YP_003122283.1 3185331 D 485918 CDS YP_003122284.1 256421631 8358760 complement(3186823..3187338) 1 NC_013132.1 hypothetical protein 3187338 8358760 Cpin_2600 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122284.1 3186823 R 485918 CDS YP_003122285.1 256421632 8358761 3187541..3188440 1 NC_013132.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rfr:Rfer_1116 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3188440 8358761 Cpin_2601 Chitinophaga pinensis DSM 2588 glycerophosphoryl diester phosphodiesterase YP_003122285.1 3187541 D 485918 CDS YP_003122286.1 256421633 8358762 complement(3188471..3189829) 1 NC_013132.1 PFAM: sulfatase; KEGG: sus:Acid_0879 sulfatase; sulfatase 3189829 8358762 Cpin_2602 Chitinophaga pinensis DSM 2588 sulfatase YP_003122286.1 3188471 R 485918 CDS YP_003122287.1 256421634 8358763 3189968..3190462 1 NC_013132.1 hypothetical protein 3190462 8358763 Cpin_2603 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122287.1 3189968 D 485918 CDS YP_003122288.1 256421635 8358764 3190526..3191866 1 NC_013132.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: maq:Maqu_3825 DEAD/DEAH box helicase domain- containing protein; DEAD/DEAH box helicase 3191866 8358764 Cpin_2604 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003122288.1 3190526 D 485918 CDS YP_003122289.1 256421636 8358765 complement(3191978..3194251) 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; hypothetical protein; KEGG: sus:Acid_6668 glycoside hydrolase family protein; glycoside hydrolase 3194251 8358765 Cpin_2605 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122289.1 3191978 R 485918 CDS YP_003122290.1 256421637 8358766 complement(3194383..3195717) 1 NC_013132.1 PFAM: beta-lactamase domain protein; SMART: rhodanese domain protein; KEGG: sus:Acid_7272 beta-lactamase domain- containing protein; beta-lactamase domain-containing protein 3195717 8358766 Cpin_2606 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003122290.1 3194383 R 485918 CDS YP_003122291.1 256421638 8358767 complement(3195735..3196151) 1 NC_013132.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: tcx:Tcr_0170 hypothetical protein; hypothetical protein 3196151 8358767 Cpin_2607 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122291.1 3195735 R 485918 CDS YP_003122292.1 256421639 8358768 complement(3196153..3196713) 1 NC_013132.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dvl:Dvul_1597 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 3196713 8358768 Cpin_2608 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122292.1 3196153 R 485918 CDS YP_003122293.1 256421640 8358769 complement(3196771..3197409) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; KEGG: hypothetical protein; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein; Crp/Fnr family transcriptional regulator 3197409 8358769 Cpin_2609 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122293.1 3196771 R 485918 CDS YP_003122294.1 256421641 8358770 3197503..3198351 1 NC_013132.1 hypothetical protein 3198351 8358770 Cpin_2610 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122294.1 3197503 D 485918 CDS YP_003122295.1 256421642 8358771 3198384..3198914 1 NC_013132.1 PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: pmu:PM0984 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 3198914 8358771 Cpin_2611 Chitinophaga pinensis DSM 2588 isoprenylcysteine carboxyl methyltransferase YP_003122295.1 3198384 D 485918 CDS YP_003122296.1 256421643 8358772 3199032..3200351 1 NC_013132.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: ank:AnaeK_1000 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 3200351 8358772 Cpin_2612 Chitinophaga pinensis DSM 2588 cytochrome bd ubiquinol oxidase subunit I YP_003122296.1 3199032 D 485918 CDS YP_003122297.1 256421644 8358773 3200364..3201383 1 NC_013132.1 PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: scl:sce2438 terminal oxidase subunit II; cytochrome bd ubiquinol oxidase subunit II 3201383 8358773 Cpin_2613 Chitinophaga pinensis DSM 2588 cytochrome bd ubiquinol oxidase subunit II YP_003122297.1 3200364 D 485918 CDS YP_003122298.1 256421645 8358774 complement(3201474..3201926) 1 NC_013132.1 KEGG: bce:BC3292 hypothetical protein; hypothetical protein 3201926 8358774 Cpin_2614 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122298.1 3201474 R 485918 CDS YP_003122299.1 256421646 8358775 3202692..3204104 1 NC_013132.1 KEGG: rso:RS02101 hemagglutinin-related protein; hypothetical protein 3204104 8358775 Cpin_2615 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122299.1 3202692 D 485918 CDS YP_003122300.1 256421647 8358776 complement(3204191..3205531) 1 NC_013132.1 PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; KEGG: scl:sce1921 endoribonucleases active with either ribo-or deoxyribonucleic acids; DNA/RNA non-specific endonuclease 3205531 8358776 Cpin_2616 Chitinophaga pinensis DSM 2588 DNA/RNA non-specific endonuclease YP_003122300.1 3204191 R 485918 CDS YP_003122301.1 256421648 8358777 3205758..3206816 1 NC_013132.1 PFAM: beta-lactamase; KEGG: hypothetical protein; beta-lactamase 3206816 8358777 Cpin_2617 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003122301.1 3205758 D 485918 CDS YP_003122302.1 256421649 8358779 complement(3211433..3213973) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3213973 8358779 Cpin_2619 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122302.1 3211433 R 485918 CDS YP_003122303.1 256421650 8358780 complement(3214236..3214574) 1 NC_013132.1 hypothetical protein 3214574 8358780 Cpin_2620 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122303.1 3214236 R 485918 CDS YP_003122304.1 256421651 8358781 complement(3214659..3215555) 1 NC_013132.1 hypothetical protein 3215555 8358781 Cpin_2621 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122304.1 3214659 R 485918 CDS YP_003122305.1 256421652 8358782 3215666..3215947 1 NC_013132.1 hypothetical protein 3215947 8358782 Cpin_2622 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122305.1 3215666 D 485918 CDS YP_003122306.1 256421653 8358783 complement(3215948..3216175) 1 NC_013132.1 hypothetical protein 3216175 8358783 Cpin_2623 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122306.1 3215948 R 485918 CDS YP_003122307.1 256421654 8358784 3216243..3217325 1 NC_013132.1 PFAM: metallophosphoesterase; metallophosphoesterase 3217325 8358784 Cpin_2624 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003122307.1 3216243 D 485918 CDS YP_003122308.1 256421655 8358785 complement(3217423..3218406) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: abc:ACICU_03463 oxidoreductase; aldo/keto reductase 3218406 8358785 Cpin_2625 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003122308.1 3217423 R 485918 CDS YP_003122309.1 256421656 8358786 complement(3218467..3220614) 1 NC_013132.1 KEGG: ccs:CCNA_00858 TonB-dependent receptor; ferrienterochelin/colicin outer membrane receptor 3220614 8358786 Cpin_2626 Chitinophaga pinensis DSM 2588 ferrienterochelin/colicin outer membrane receptor YP_003122309.1 3218467 R 485918 CDS YP_003122310.1 256421657 8358787 complement(3220742..3221089) 1 NC_013132.1 hypothetical protein 3221089 8358787 Cpin_2627 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122310.1 3220742 R 485918 CDS YP_003122311.1 256421658 8358788 3221190..3221747 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mms:mma_1362 RNA polymerase sigma factor RpoE; ECF subfamily RNA polymerase sigma-24 subunit 3221747 8358788 Cpin_2628 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122311.1 3221190 D 485918 CDS YP_003122312.1 256421659 8358789 3221744..3222163 1 NC_013132.1 hypothetical protein 3222163 8358789 Cpin_2629 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122312.1 3221744 D 485918 CDS YP_003122313.1 256421660 8358790 complement(3222154..3222996) 1 NC_013132.1 KEGG: rlt:Rleg2_2227 hypothetical protein; hypothetical protein 3222996 8358790 Cpin_2630 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122313.1 3222154 R 485918 CDS YP_003122314.1 256421661 8358791 complement(3223119..3223844) 1 NC_013132.1 KEGG: gme:Gmet_2981 hypothetical protein; hypothetical protein 3223844 8358791 Cpin_2631 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122314.1 3223119 R 485918 CDS YP_003122315.1 256421662 8358792 3224139..3224981 1 NC_013132.1 KEGG: swd:Swoo_2503 hypothetical protein; hypothetical protein 3224981 8358792 Cpin_2632 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122315.1 3224139 D 485918 CDS YP_003122316.1 256421663 8358793 complement(3225078..3225443) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bce:BC4316 MarR family transcriptional regulator; HxlR family transcriptional regulator 3225443 8358793 Cpin_2633 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122316.1 3225078 R 485918 CDS YP_003122317.1 256421664 8358794 complement(3225575..3226585) 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ppw:PputW619_3235 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 3226585 8358794 Cpin_2634 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003122317.1 3225575 R 485918 CDS YP_003122318.1 256421665 8358795 3226715..3227572 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_0499 AraC family transcriptional regulator; AraC family transcriptional regulator 3227572 8358795 Cpin_2635 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122318.1 3226715 D 485918 CDS YP_003122319.1 256421666 8358796 3227765..3228958 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: abu:Abu_1991 transport protein AraJ; major facilitator superfamily protein 3228958 8358796 Cpin_2636 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003122319.1 3227765 D 485918 CDS YP_003122320.1 256421667 8358797 complement(3229023..3230504) 1 NC_013132.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: scl:sce1268 GntR family transcriptional regulator; GntR family transcriptional regulator 3230504 8358797 Cpin_2637 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003122320.1 3229023 R 485918 CDS YP_003122321.1 256421668 8358798 3230711..3231241 1 NC_013132.1 KEGG: pfl:PFL_2128 acetyltransferase; acetyltransferase 3231241 8358798 Cpin_2638 Chitinophaga pinensis DSM 2588 acetyltransferase YP_003122321.1 3230711 D 485918 CDS YP_003122322.1 256421669 8358799 3231243..3231764 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: asu:Asuc_0740 prolyl aminopeptidase; N-acetyltransferase GCN5 3231764 8358799 Cpin_2639 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122322.1 3231243 D 485918 CDS YP_003122323.1 256421670 8358800 complement(3231811..3232041) 1 NC_013132.1 KEGG: aceF; dihydrolipoamide acetyltransferase; hypothetical protein 3232041 8358800 Cpin_2640 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122323.1 3231811 R 485918 CDS YP_003122324.1 256421671 8358801 3232285..3234096 1 NC_013132.1 KEGG: sat:SYN_01430 GerE transcriptional regulator; hypothetical protein 3234096 8358801 Cpin_2641 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122324.1 3232285 D 485918 CDS YP_003122325.1 256421672 8358802 complement(3234185..3234481) 1 NC_013132.1 hypothetical protein 3234481 8358802 Cpin_2642 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122325.1 3234185 R 485918 CDS YP_003122326.1 256421673 8358803 complement(3234596..3234739) 1 NC_013132.1 hypothetical protein 3234739 8358803 Cpin_2643 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122326.1 3234596 R 485918 CDS YP_003122327.1 256421674 8358804 complement(3234899..3236353) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpe:BP2620 membrane efflux protein; major facilitator superfamily protein 3236353 8358804 Cpin_2644 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003122327.1 3234899 R 485918 CDS YP_003122328.1 256421675 8358805 3236519..3236878 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: dvm:DvMF_2974 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 3236878 8358805 Cpin_2645 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122328.1 3236519 D 485918 CDS YP_003122329.1 256421676 8358806 3236918..3238333 1 NC_013132.1 hypothetical protein 3238333 8358806 Cpin_2646 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122329.1 3236918 D 485918 CDS YP_003122330.1 256421677 8358807 complement(3238528..3238878) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bcr:BCAH187_A3455 hypothetical protein; HxlR family transcriptional regulator 3238878 8358807 Cpin_2647 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122330.1 3238528 R 485918 CDS YP_003122331.1 256421678 8358808 3238995..3240017 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain-containing protein 3240017 8358808 Cpin_2648 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003122331.1 3238995 D 485918 CDS YP_003122332.1 256421679 8358809 complement(3240079..3240666) 1 NC_013132.1 PFAM: CheB methylesterase; KEGG: mgm:Mmc1_3390 MCP methyltransferase, CheR- type; CheB methylesterase 3240666 8358809 Cpin_2649 Chitinophaga pinensis DSM 2588 CheB methylesterase YP_003122332.1 3240079 R 485918 CDS YP_003122333.1 256421680 8358810 complement(3240755..3241150) 1 NC_013132.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mfa:Mfla_1840 tRNA-adenosine deaminase; zinc-binding CMP/dCMP deaminase 3241150 8358810 Cpin_2650 Chitinophaga pinensis DSM 2588 zinc-binding CMP/dCMP deaminase YP_003122333.1 3240755 R 485918 CDS YP_003122334.1 256421681 8358811 complement(3241237..3241668) 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mlo:mlr8209 hypothetical protein; MarR family transcriptional regulator 3241668 8358811 Cpin_2651 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003122334.1 3241237 R 485918 CDS YP_003122335.1 256421682 8358812 complement(3241718..3242218) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_3019 transcriptional regulator, MarR family with acetyltransferase activity; N-acetyltransferase GCN5 3242218 8358812 Cpin_2652 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122335.1 3241718 R 485918 CDS YP_003122336.1 256421683 8358813 3242329..3242424 1 NC_013132.1 hypothetical protein 3242424 8358813 Cpin_2653 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122336.1 3242329 D 485918 CDS YP_003122337.1 256421684 8358814 3242434..3243231 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: scl:sce1411 dehydrogenase; short-chain dehydrogenase/reductase SDR 3243231 8358814 Cpin_2654 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122337.1 3242434 D 485918 CDS YP_003122338.1 256421685 8358815 3243292..3244206 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 3244206 8358815 Cpin_2655 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122338.1 3243292 D 485918 CDS YP_003122339.1 256421686 8358816 complement(3244210..3244962) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: reh:H16_A3389 response regulator containing a LytTR DNA-binding domain; LytTR family two component transcriptional regulator 3244962 8358816 Cpin_2656 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003122339.1 3244210 R 485918 CDS YP_003122340.1 256421687 8358817 complement(3244959..3246395) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: hypothetical protein; signal transduction histidine kinase LytS 3246395 8358817 Cpin_2657 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003122340.1 3244959 R 485918 CDS YP_003122341.1 256421688 8358818 complement(3246449..3247723) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: cja:CJA_3267 thiol:disulfide interchange protein DsbE; alkyl hydroperoxide reductase 3247723 8358818 Cpin_2658 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122341.1 3246449 R 485918 CDS YP_003122342.1 256421689 8358819 3247818..3248051 1 NC_013132.1 hypothetical protein 3248051 8358819 Cpin_2659 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122342.1 3247818 D 485918 CDS YP_003122343.1 256421690 8358820 3248088..3249116 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 3249116 8358820 Cpin_2660 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003122343.1 3248088 D 485918 CDS YP_003122344.1 256421691 8358821 3249097..3249855 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region; LytTR family two component transcriptional regulator 3249855 8358821 Cpin_2661 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003122344.1 3249097 D 485918 CDS YP_003122345.1 256421692 8358822 3250196..3251533 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: saz:Sama_3048 outer membrane channel protein; outer membrane efflux protein 3251533 8358822 Cpin_2662 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003122345.1 3250196 D 485918 CDS YP_003122346.1 256421693 8358823 3251542..3252600 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cbg:CbuG_1197 acriflavin resistance periplasmic protein; RND family efflux transporter MFP subunit 3252600 8358823 Cpin_2663 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003122346.1 3251542 D 485918 CDS YP_003122347.1 256421694 8358824 3252615..3255734 1 NC_013132.1 PFAM: acriflavin resistance protein; KEGG: dde:Dde_0965 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 3255734 8358824 Cpin_2664 Chitinophaga pinensis DSM 2588 acriflavin resistance protein YP_003122347.1 3252615 D 485918 CDS YP_003122348.1 256421695 8358825 3255834..3256838 1 NC_013132.1 hypothetical protein 3256838 8358825 Cpin_2665 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122348.1 3255834 D 485918 CDS YP_003122349.1 256421696 8358826 complement(3257069..3258340) 1 NC_013132.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: mxa:MXAN_5134 MutS domain protein; DNA mismatch repair protein MutS domain-containing protein 3258340 8358826 Cpin_2666 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutS domain-containing protein YP_003122349.1 3257069 R 485918 CDS YP_003122350.1 256421697 8358827 complement(3258343..3259671) 1 NC_013132.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: vsa:VSAL_I0632 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS domain-containing protein 3259671 8358827 Cpin_2667 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutS domain-containing protein YP_003122350.1 3258343 R 485918 CDS YP_003122351.1 256421698 8358828 complement(3259677..3261983) 1 NC_013132.1 PFAM: ABC-2 type transporter; KEGG: mca:MCA3077 ABC transporter, permease protein; ABC transporter 3261983 8358828 Cpin_2668 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122351.1 3259677 R 485918 CDS YP_003122352.1 256421699 8358829 complement(3261990..3262916) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2644 ABC transporter, ATPase subunit; ABC transporter 3262916 8358829 Cpin_2669 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122352.1 3261990 R 485918 CDS YP_003122353.1 256421700 8358830 complement(3262938..3264392) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3264392 8358830 Cpin_2670 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122353.1 3262938 R 485918 CDS YP_003122354.1 256421701 8358831 complement(3264412..3268020) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3268020 8358831 Cpin_2671 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122354.1 3264412 R 485918 CDS YP_003122355.1 256421702 8358832 complement(3268134..3269294) 1 NC_013132.1 PFAM: FecR protein; KEGG: nwi:Nwi_3080 FecR protein; anti-FecI sigma factor FecR 3269294 8358832 Cpin_2672 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122355.1 3268134 R 485918 CDS YP_003122356.1 256421703 8358833 complement(3269369..3269950) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: ppu:PP_4608 ECF subfamily RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 3269950 8358833 Cpin_2673 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122356.1 3269369 R 485918 CDS YP_003122357.1 256421704 8358834 3270199..3271158 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: rle:pRL110137 cyclase/dehydrase; beta-lactamase domain-containing protein 3271158 8358834 Cpin_2674 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003122357.1 3270199 D 485918 CDS YP_003122358.1 256421705 8358835 complement(3271206..3272393) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: mxa:MXAN_0888 Ser/Thr protein phosphatase family protein; metallophosphoesterase 3272393 8358835 Cpin_2675 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003122358.1 3271206 R 485918 CDS YP_003122359.1 256421706 8358836 3272643..3273221 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: sde:Sde_3995 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 3273221 8358836 Cpin_2676 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122359.1 3272643 D 485918 CDS YP_003122360.1 256421707 8358837 3273334..3273984 1 NC_013132.1 PFAM: nitroreductase; KEGG: dar:Daro_1339 nitroreductase; nitroreductase 3273984 8358837 Cpin_2677 Chitinophaga pinensis DSM 2588 nitroreductase YP_003122360.1 3273334 D 485918 CDS YP_003122361.1 256421708 8358838 3273994..3274290 1 NC_013132.1 KEGG: son:SO_1000 rhomboid family protein; hypothetical protein 3274290 8358838 Cpin_2678 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122361.1 3273994 D 485918 CDS YP_003122362.1 256421709 8358839 3274268..3274720 1 NC_013132.1 PFAM: rhomboid family protein; KEGG: shw:Sputw3181_3263 rhomboid family protein; rhomboid family protein 3274720 8358839 Cpin_2679 Chitinophaga pinensis DSM 2588 rhomboid family protein YP_003122362.1 3274268 D 485918 CDS YP_003122363.1 256421710 8358840 complement(3275146..3275610) 1 NC_013132.1 KEGG: dal:Dalk_2193 hypothetical protein; hypothetical protein 3275610 8358840 Cpin_2680 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122363.1 3275146 R 485918 CDS YP_003122364.1 256421711 8358841 3275744..3276346 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: msl:Msil_0388 transcriptional regulator, TetR family; TetR family transcriptional regulator 3276346 8358841 Cpin_2681 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003122364.1 3275744 D 485918 CDS YP_003122365.1 256421712 8358842 3276488..3277150 1 NC_013132.1 hypothetical protein 3277150 8358842 Cpin_2682 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122365.1 3276488 D 485918 CDS YP_003122366.1 256421713 8358843 3277344..3278000 1 NC_013132.1 KEGG: xca:xccb100_3880 hypothetical protein; hypothetical protein 3278000 8358843 Cpin_2683 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122366.1 3277344 D 485918 CDS YP_003122367.1 256421714 8358844 3278176..3279696 1 NC_013132.1 KEGG: sus:Acid_7554 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3279696 8358844 Cpin_2684 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003122367.1 3278176 D 485918 CDS YP_003122368.1 256421715 8358845 complement(3279756..3280280) 1 NC_013132.1 PFAM: YceI family protein; KEGG: YceI family protein; hypothetical protein 3280280 8358845 Cpin_2685 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122368.1 3279756 R 485918 CDS YP_003122369.1 256421716 8358846 complement(3280377..3280964) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein; Crp/Fnr family transcriptional regulator 3280964 8358846 Cpin_2686 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122369.1 3280377 R 485918 CDS YP_003122370.1 256421717 8358847 complement(3281034..3284075) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: pol:Bpro_3898 multi-sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 3284075 8358847 Cpin_2687 Chitinophaga pinensis DSM 2588 response regulator receiver sensor signal transduction histidine kinase YP_003122370.1 3281034 R 485918 CDS YP_003122371.1 256421718 8358848 3284233..3284541 1 NC_013132.1 hypothetical protein 3284541 8358848 Cpin_2688 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122371.1 3284233 D 485918 CDS YP_003122372.1 256421719 8358849 3284779..3289158 1 NC_013132.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; outer membrane efflux protein; KEGG: tbd:Tbd_1327 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump 3289158 8358849 Cpin_2689 Chitinophaga pinensis DSM 2588 CzcA family heavy metal efflux pump YP_003122372.1 3284779 D 485918 CDS YP_003122373.1 256421720 8358850 3289171..3290421 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: gsu:GSU0829 CzcB family heavy metal efflux protein; RND family efflux transporter MFP subunit 3290421 8358850 Cpin_2690 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003122373.1 3289171 D 485918 CDS YP_003122374.1 256421721 8358851 3290493..3292526 1 NC_013132.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; KEGG: oca:OCAR_7723 cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase 3292526 8358851 Cpin_2691 Chitinophaga pinensis DSM 2588 heavy metal translocating P-type ATPase YP_003122374.1 3290493 D 485918 CDS YP_003122375.1 256421722 8358852 3292596..3294914 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: sus:Acid_0469 peptidase S9B dipeptidylpeptidase IV subunit; dipeptidyl-peptidase IV 3294914 8358852 Cpin_2692 Chitinophaga pinensis DSM 2588 dipeptidyl-peptidase IV YP_003122375.1 3292596 D 485918 CDS YP_003122376.1 256421723 8358853 3295787..3296665 1 NC_013132.1 PFAM: NmrA family protein; short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1828 NmrA family protein; NmrA family protein 3296665 8358853 Cpin_2693 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003122376.1 3295787 D 485918 CDS YP_003122377.1 256421724 8358854 3296750..3297592 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rlt:Rleg2_1368 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3297592 8358854 Cpin_2694 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122377.1 3296750 D 485918 CDS YP_003122378.1 256421725 8358855 3297675..3298709 1 NC_013132.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_3529 AraC family transcriptional regulator; AraC family transcriptional regulator 3298709 8358855 Cpin_2695 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122378.1 3297675 D 485918 CDS YP_003122379.1 256421726 8358856 3298718..3299626 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aby:ABAYE0223 transcriptional regulator (AraC-like); AraC family transcriptional regulator 3299626 8358856 Cpin_2696 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122379.1 3298718 D 485918 CDS YP_003122380.1 256421727 8358857 complement(3299663..3300271) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein; TetR family transcriptional regulator 3300271 8358857 Cpin_2697 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003122380.1 3299663 R 485918 CDS YP_003122381.1 256421728 8358858 3300441..3301079 1 NC_013132.1 PFAM: carbonic anhydrase; KEGG: bpy:Bphyt_1090 carbonic anhydrase; carbonic anhydrase 3301079 8358858 Cpin_2698 Chitinophaga pinensis DSM 2588 carbonic anhydrase YP_003122381.1 3300441 D 485918 CDS YP_003122382.1 256421729 8358859 3301176..3301805 1 NC_013132.1 KEGG: bpy:Bphyt_1089 hypothetical protein; hypothetical protein 3301805 8358859 Cpin_2699 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122382.1 3301176 D 485918 CDS YP_003122383.1 256421730 8358860 3301839..3302468 1 NC_013132.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bpy:Bphyt_1089 hypothetical protein; metal dependent phosphohydrolase 3302468 8358860 Cpin_2700 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003122383.1 3301839 D 485918 CDS YP_003122384.1 256421731 8358861 complement(3303166..3303402) 1 NC_013132.1 hypothetical protein 3303402 8358861 Cpin_2701 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122384.1 3303166 R 485918 CDS YP_003122385.1 256421732 8358862 complement(3303513..3304043) 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ccv:CCV52592_1006 general stress protein 14 (GSP14); NAD(P)H dehydrogenase (quinone) 3304043 8358862 Cpin_2702 Chitinophaga pinensis DSM 2588 NAD(P)H dehydrogenase (quinone) YP_003122385.1 3303513 R 485918 CDS YP_003122386.1 256421733 8358863 3304137..3304493 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: rpt:Rpal_3638 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 3304493 8358863 Cpin_2703 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122386.1 3304137 D 485918 CDS YP_003122387.1 256421734 8358864 complement(3304494..3306689) 1 NC_013132.1 KEGG: swi:Swit_1900 quinoprotein glucose dehydrogenase; PFAM: cytochrome C class I; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; quinoprotein glucose dehydrogenase 3306689 8358864 Cpin_2704 Chitinophaga pinensis DSM 2588 quinoprotein glucose dehydrogenase YP_003122387.1 3304494 R 485918 CDS YP_003122388.1 256421735 8358865 3307021..3309591 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: pol:Bpro_3509 signal transduction histidine kinase; signal transduction histidine kinase 3309591 8358865 Cpin_2705 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003122388.1 3307021 D 485918 CDS YP_003122389.1 256421736 8358866 complement(3309614..3310009) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bpy:Bphyt_1097 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 3310009 8358866 Cpin_2706 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122389.1 3309614 R 485918 CDS YP_003122390.1 256421737 8358867 3310173..3310775 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: har:HEAR0564 NADH-azoreductase AzoR, FMN-dependent; NAD(P)H dehydrogenase (quinone) 3310775 8358867 Cpin_2707 Chitinophaga pinensis DSM 2588 NAD(P)H dehydrogenase (quinone) YP_003122390.1 3310173 D 485918 CDS YP_003122391.1 256421738 8358868 3310942..3311259 1 NC_013132.1 KEGG: dal:Dalk_1206 hypothetical protein; hypothetical protein 3311259 8358868 Cpin_2708 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122391.1 3310942 D 485918 CDS YP_003122392.1 256421739 8358869 complement(3311451..3311816) 1 NC_013132.1 KEGG: rde:RD1_2497 hypothetical protein; hypothetical protein 3311816 8358869 Cpin_2709 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122392.1 3311451 R 485918 CDS YP_003122393.1 256421740 8358871 complement(3312287..3313375) 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pla:Plav_2693 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 3313375 8358871 Cpin_2711 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003122393.1 3312287 R 485918 CDS YP_003122394.1 256421741 8358872 complement(3313479..3314150) 1 NC_013132.1 KEGG: pzu:PHZ_c1818 dithiol-disulfide isomerase; dithiol-disulfide isomerase 3314150 8358872 Cpin_2712 Chitinophaga pinensis DSM 2588 dithiol-disulfide isomerase YP_003122394.1 3313479 R 485918 CDS YP_003122395.1 256421742 8358873 3314418..3315149 1 NC_013132.1 KEGG: bcz:BCZK4149 hypothetical protein; hypothetical protein 3315149 8358873 Cpin_2713 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122395.1 3314418 D 485918 CDS YP_003122396.1 256421743 8358874 3315165..3316091 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 3316091 8358874 Cpin_2714 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122396.1 3315165 D 485918 CDS YP_003122397.1 256421744 8358875 complement(3316151..3317314) 1 NC_013132.1 PFAM: beta-lactamase; KEGG: bra:BRADO4091 beta-lactamase family protein; 6-aminohexanoate-dimer hydrolase; 6-aminohexanoate-dimer hydrolase 3317314 8358875 Cpin_2715 Chitinophaga pinensis DSM 2588 6-aminohexanoate-dimer hydrolase YP_003122397.1 3316151 R 485918 CDS YP_003122398.1 256421745 8358876 complement(3317375..3317944) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 3317944 8358876 Cpin_2716 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122398.1 3317375 R 485918 CDS YP_003122399.1 256421746 8358877 complement(3318041..3319237) 1 NC_013132.1 PFAM: RNA methylase; KEGG: dde:Dde_1488 hypothetical protein; RNA methylase 3319237 8358877 Cpin_2717 Chitinophaga pinensis DSM 2588 RNA methylase YP_003122399.1 3318041 R 485918 CDS YP_003122400.1 256421747 8358879 3319677..3319883 1 NC_013132.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: acb:A1S_1476 hypothetical protein; 4-oxalocrotonate tautomerase 3319883 8358879 Cpin_2719 Chitinophaga pinensis DSM 2588 4-oxalocrotonate tautomerase YP_003122400.1 3319677 D 485918 CDS YP_003122401.1 256421748 8358880 complement(3320046..3323207) 1 NC_013132.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: aba:Acid345_4484 glycoside hydrolase family 2, TIM barrel; glycoside hydrolase 3323207 8358880 Cpin_2720 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122401.1 3320046 R 485918 CDS YP_003122402.1 256421749 8358881 complement(3323303..3324982) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3324982 8358881 Cpin_2721 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122402.1 3323303 R 485918 CDS YP_003122403.1 256421750 8358882 complement(3324994..3328131) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 3328131 8358882 Cpin_2722 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003122403.1 3324994 R 485918 CDS YP_003122404.1 256421751 8358883 3328459..3332502 1 NC_013132.1 PFAM: response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; ATP-binding region ATPase domain protein; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sdn:Sden_1699 ATP-binding region, ATPase-like protein; histidine kinase 3332502 8358883 Cpin_2723 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122404.1 3328459 D 485918 CDS YP_003122405.1 256421752 8358885 3333094..3334701 1 NC_013132.1 PFAM: glycoside hydrolase family 76; Ricin B lectin; KEGG: hypothetical protein; glycoside hydrolase 3334701 8358885 Cpin_2725 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122405.1 3333094 D 485918 CDS YP_003122406.1 256421753 8358887 3335120..3335791 1 NC_013132.1 TIGRFAM: uracil-DNA glycosylase; PFAM: uracil-DNA glycosylase superfamily; KEGG: ppu:PP_1413 uracil-DNA glycosylase; uracil-DNA glycosylase 3335791 8358887 Cpin_2726 Chitinophaga pinensis DSM 2588 uracil-DNA glycosylase YP_003122406.1 3335120 D 485918 CDS YP_003122407.1 256421754 8358888 complement(3335872..3337014) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: nmu:Nmul_A2107 secretion protein HlyD; RND family efflux transporter MFP subunit 3337014 8358888 Cpin_2727 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003122407.1 3335872 R 485918 CDS YP_003122408.1 256421755 8358889 complement(3337026..3341378) 1 NC_013132.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ccs:CCNA_02473 cobalt-zinc-cadmium resistance protein CzcA; CzcA family heavy metal efflux pump 3341378 8358889 Cpin_2728 Chitinophaga pinensis DSM 2588 CzcA family heavy metal efflux pump YP_003122408.1 3337026 R 485918 CDS YP_003122409.1 256421756 8358890 complement(3341480..3341821) 1 NC_013132.1 hypothetical protein 3341821 8358890 Cpin_2729 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122409.1 3341480 R 485918 CDS YP_003122410.1 256421757 8358891 3341985..3342569 1 NC_013132.1 PFAM: protein of unknown function DUF1543; KEGG: pcr:Pcryo_1420 hypothetical protein; hypothetical protein 3342569 8358891 Cpin_2730 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122410.1 3341985 D 485918 CDS YP_003122411.1 256421758 8358892 3342581..3343300 1 NC_013132.1 KEGG: bce:BC2314 hypothetical protein; hypothetical protein 3343300 8358892 Cpin_2731 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122411.1 3342581 D 485918 CDS YP_003122412.1 256421759 8358893 complement(3343307..3343804) 1 NC_013132.1 hypothetical protein 3343804 8358893 Cpin_2732 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122412.1 3343307 R 485918 CDS YP_003122413.1 256421760 8358894 complement(3343824..3344549) 1 NC_013132.1 hypothetical protein 3344549 8358894 Cpin_2733 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122413.1 3343824 R 485918 CDS YP_003122414.1 256421761 8358895 3344704..3347466 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: sus:Acid_2894 glycoside hydrolase family protein; glycoside hydrolase 3347466 8358895 Cpin_2734 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122414.1 3344704 D 485918 CDS YP_003122415.1 256421762 8358896 3347540..3348919 1 NC_013132.1 KEGG: sus:Acid_6537 hypothetical protein; hypothetical protein 3348919 8358896 Cpin_2735 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122415.1 3347540 D 485918 CDS YP_003122416.1 256421763 8358897 3348916..3350799 1 NC_013132.1 KEGG: cak:Caul_2405 hypothetical protein; hypothetical protein 3350799 8358897 Cpin_2736 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122416.1 3348916 D 485918 CDS YP_003122417.1 256421764 8358898 3350812..3353016 1 NC_013132.1 PFAM: alpha-L-rhamnosidase; KEGG: kpe:KPK_2466 alpha-L-rhamnosidase family protein; alpha-L-rhamnosidase 3353016 8358898 Cpin_2737 Chitinophaga pinensis DSM 2588 alpha-L-rhamnosidase YP_003122417.1 3350812 D 485918 CDS YP_003122418.1 256421765 8358899 3353000..3355042 1 NC_013132.1 PFAM: protein of unknown function DUF1680; KEGG: pat:Patl_0910 hypothetical protein; hypothetical protein 3355042 8358899 Cpin_2738 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122418.1 3353000 D 485918 CDS YP_003122419.1 256421766 8358900 3355580..3358804 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: xop:PXO_01318 TonB-dependent outer membrane receptor/Oar-like protein; TonB-dependent receptor plug 3358804 8358900 Cpin_2739 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122419.1 3355580 D 485918 CDS YP_003122420.1 256421767 8358901 complement(3358921..3361098) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor; TonB-dependent receptor plug 3361098 8358901 Cpin_2740 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122420.1 3358921 R 485918 CDS YP_003122421.1 256421768 8358902 3361220..3362656 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_4778 sensory box histidine kinase PhoR1; histidine kinase 3362656 8358902 Cpin_2741 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122421.1 3361220 D 485918 CDS YP_003122422.1 256421769 8358903 3362653..3363345 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dal:Dalk_3609 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 3363345 8358903 Cpin_2742 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003122422.1 3362653 D 485918 CDS YP_003122423.1 256421770 8358904 3363488..3365233 1 NC_013132.1 PFAM: sulfatase; KEGG: smd:Smed_2065 sulfatase; sulfatase 3365233 8358904 Cpin_2743 Chitinophaga pinensis DSM 2588 sulfatase YP_003122423.1 3363488 D 485918 CDS YP_003122424.1 256421771 8358905 3365347..3367746 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 3367746 8358905 Cpin_2744 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122424.1 3365347 D 485918 CDS YP_003122425.1 256421772 8358906 complement(3367750..3369570) 1 NC_013132.1 hypothetical protein 3369570 8358906 Cpin_2745 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122425.1 3367750 R 485918 CDS YP_003122426.1 256421773 8358907 complement(3369635..3370429) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sus:Acid_3628 AraC family transcriptional regulator; AraC family transcriptional regulator 3370429 8358907 Cpin_2746 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122426.1 3369635 R 485918 CDS YP_003122427.1 256421774 8358908 complement(3370434..3370823) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B0246 transcriptional regulator; HxlR family transcriptional regulator 3370823 8358908 Cpin_2747 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122427.1 3370434 R 485918 CDS YP_003122428.1 256421775 8358909 complement(3370865..3371860) 1 NC_013132.1 hypothetical protein 3371860 8358909 Cpin_2748 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122428.1 3370865 R 485918 CDS YP_003122429.1 256421776 8358910 3372500..3373945 1 NC_013132.1 PFAM: amino acid permease-associated region; KEGG: mpo:Mpop_4969 amino acid permease-associated region; amino acid permease-associated protein 3373945 8358910 Cpin_2749 Chitinophaga pinensis DSM 2588 amino acid permease-associated protein YP_003122429.1 3372500 D 485918 CDS YP_003122430.1 256421777 8358911 3374045..3377275 1 NC_013132.1 PFAM: peptidase S41; hypothetical protein; SMART: peptidase S41; KEGG: vco:VC0395_0089 tricorn protease; peptidase S41 3377275 8358911 Cpin_2750 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003122430.1 3374045 D 485918 CDS YP_003122431.1 256421778 8358912 3377384..3377839 1 NC_013132.1 hypothetical protein 3377839 8358912 Cpin_2751 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122431.1 3377384 D 485918 CDS YP_003122432.1 256421779 8358913 complement(3377886..3378731) 1 NC_013132.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family; hypothetical protein 3378731 8358913 Cpin_2752 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122432.1 3377886 R 485918 CDS YP_003122433.1 256421780 8358914 complement(3378942..3380687) 1 NC_013132.1 PFAM: peptidase M56 BlaR1; KEGG: mxa:MXAN_0189 hypothetical protein; peptidase M56 BlaR1 3380687 8358914 Cpin_2753 Chitinophaga pinensis DSM 2588 peptidase M56 BlaR1 YP_003122433.1 3378942 R 485918 CDS YP_003122434.1 256421781 8358915 complement(3380702..3381103) 1 NC_013132.1 PFAM: Penicillinase repressor; KEGG: mxa:MXAN_4242 transcriptional regulator; CopY family transcriptional regulator 3381103 8358915 Cpin_2754 Chitinophaga pinensis DSM 2588 CopY family transcriptional regulator YP_003122434.1 3380702 R 485918 CDS YP_003122435.1 256421782 8358916 complement(3381245..3382615) 1 NC_013132.1 PFAM: aminotransferase class I and II; KEGG: bbt:BBta_7471 GntR family transcriptional regulator; GntR family transcriptional regulator 3382615 8358916 Cpin_2755 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003122435.1 3381245 R 485918 CDS YP_003122436.1 256421783 8358917 3382734..3383027 1 NC_013132.1 hypothetical protein 3383027 8358917 Cpin_2756 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122436.1 3382734 D 485918 CDS YP_003122437.1 256421784 8358918 3383041..3383658 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pau:PA14_54120 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 3383658 8358918 Cpin_2757 Chitinophaga pinensis DSM 2588 NAD(P)H dehydrogenase (quinone) YP_003122437.1 3383041 D 485918 CDS YP_003122438.1 256421785 8358919 3383704..3384162 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azo:azo3635 acetyltransferase; N-acetyltransferase GCN5 3384162 8358919 Cpin_2758 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122438.1 3383704 D 485918 CDS YP_003122439.1 256421786 8358920 3384458..3385093 1 NC_013132.1 PFAM: ThiJ/PfpI domain protein; KEGG: xca:xccb100_0627 hypothetical protein; ThiJ/PfpI domain-containing protein 3385093 8358920 Cpin_2759 Chitinophaga pinensis DSM 2588 ThiJ/PfpI domain-containing protein YP_003122439.1 3384458 D 485918 CDS YP_003122440.1 256421787 8358921 complement(3385178..3386335) 1 NC_013132.1 KEGG: sde:Sde_0704 16S rRNA dimethylase; hypothetical protein 3386335 8358921 Cpin_2760 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122440.1 3385178 R 485918 CDS YP_003122441.1 256421788 8358922 complement(3386616..3387011) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mxa:MXAN_6707 glyoxalase family protein; bleomycin resistance protein 3387011 8358922 Cpin_2761 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003122441.1 3386616 R 485918 CDS YP_003122442.1 256421789 8358923 3387148..3388146 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpt:Bpet3226 AraC family transcriptional regulator; AraC family transcriptional regulator 3388146 8358923 Cpin_2762 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122442.1 3387148 D 485918 CDS YP_003122443.1 256421790 8358924 3388245..3389570 1 NC_013132.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: pfo:Pfl01_4034 amino acid permease-associated region; ethanolamine transporter 3389570 8358924 Cpin_2763 Chitinophaga pinensis DSM 2588 ethanolamine transporter YP_003122443.1 3388245 D 485918 CDS YP_003122444.1 256421791 8358925 3389585..3390961 1 NC_013132.1 PFAM: ethanolamine ammonia lyase large subunit; KEGG: pmy:Pmen_2682 ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase 3390961 8358925 Cpin_2764 Chitinophaga pinensis DSM 2588 ethanolamine ammonia-lyase YP_003122444.1 3389585 D 485918 CDS YP_003122445.1 256421792 8358926 3390958..3391740 1 NC_013132.1 PFAM: ethanolamine ammonia-lyase light chain; KEGG: pau:PA14_11760 ethanolamine ammonia-lyase small subunit; ethanolamine ammonia-lyase 3391740 8358926 Cpin_2765 Chitinophaga pinensis DSM 2588 ethanolamine ammonia-lyase YP_003122445.1 3390958 D 485918 CDS YP_003122446.1 256421793 8358927 3391829..3392386 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: ilo:IL1936 DNA-directed RNA polymerase specialized sigma subunit; ECF subfamily RNA polymerase sigma-24 subunit 3392386 8358927 Cpin_2766 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122446.1 3391829 D 485918 CDS YP_003122447.1 256421794 8358928 3392431..3393345 1 NC_013132.1 PFAM: FecR protein; KEGG: nwi:Nwi_0657 FecR protein; anti-FecI sigma factor FecR 3393345 8358928 Cpin_2767 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122447.1 3392431 D 485918 CDS YP_003122448.1 256421795 8358929 3393365..3396568 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3396568 8358929 Cpin_2768 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122448.1 3393365 D 485918 CDS YP_003122449.1 256421796 8358930 3396578..3398107 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3398107 8358930 Cpin_2769 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122449.1 3396578 D 485918 CDS YP_003122450.1 256421797 8358931 complement(3398110..3398463) 1 NC_013132.1 hypothetical protein 3398463 8358931 Cpin_2770 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122450.1 3398110 R 485918 CDS YP_003122451.1 256421798 8358932 3398610..3398816 1 NC_013132.1 hypothetical protein 3398816 8358932 Cpin_2771 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122451.1 3398610 D 485918 CDS YP_003122452.1 256421799 8358933 3399157..3403539 1 NC_013132.1 hypothetical protein 3403539 8358933 Cpin_2772 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122452.1 3399157 D 485918 CDS YP_003122453.1 256421800 8358934 3403545..3405617 1 NC_013132.1 PFAM: fibronectin type III domain protein; KEGG: lch:Lcho_3794 fibronectin type III domain- containing protein; fibronectin type III domain-containing protein 3405617 8358934 Cpin_2773 Chitinophaga pinensis DSM 2588 fibronectin type III domain-containing protein YP_003122453.1 3403545 D 485918 CDS YP_003122454.1 256421801 8358935 3405629..3411043 1 NC_013132.1 KEGG: sus:Acid_6881 Ig family protein; hypothetical protein 3411043 8358935 Cpin_2774 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122454.1 3405629 D 485918 CDS YP_003122455.1 256421802 8358936 3411058..3412848 1 NC_013132.1 KEGG: B-box zinc finger family protein; hypothetical protein 3412848 8358936 Cpin_2775 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122455.1 3411058 D 485918 CDS YP_003122456.1 256421803 8358937 3412869..3418973 1 NC_013132.1 PFAM: fibronectin type III domain protein; fibronectin type III domain-containing protein 3418973 8358937 Cpin_2776 Chitinophaga pinensis DSM 2588 fibronectin type III domain-containing protein YP_003122456.1 3412869 D 485918 CDS YP_003122457.1 256421804 8358938 3418973..3419452 1 NC_013132.1 KEGG: dac:Daci_4513 hypothetical protein; hypothetical protein 3419452 8358938 Cpin_2777 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122457.1 3418973 D 485918 CDS YP_003122458.1 256421805 8358939 complement(3419554..3420300) 1 NC_013132.1 hypothetical protein 3420300 8358939 Cpin_2778 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122458.1 3419554 R 485918 CDS YP_003122459.1 256421806 8358940 complement(3420475..3421032) 1 NC_013132.1 KEGG: har:HEAR2602 peptide methionine sulfoxide reductase (protein-methionine-S-oxide reductase) (peptide Met(O) reductase); TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 3421032 8358940 Cpin_2779 Chitinophaga pinensis DSM 2588 peptide methionine sulfoxide reductase YP_003122459.1 3420475 R 485918 CDS YP_003122460.1 256421807 8358941 3421331..3423448 1 NC_013132.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; KEGG: bsu:BSU28580 recombination and DNA strand exchange inhibitor protein; DNA mismatch repair protein MutS domain-containing protein 3423448 8358941 Cpin_2780 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutS domain-containing protein YP_003122460.1 3421331 D 485918 CDS YP_003122461.1 256421808 8358942 3424018..3424458 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mno:Mnod_4492 transcriptional regulator, MarR family; MarR family transcriptional regulator 3424458 8358942 Cpin_2781 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003122461.1 3424018 D 485918 CDS YP_003122462.1 256421809 8358943 3424740..3425621 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_0921 transcriptional regulator, AraC family; AraC family transcriptional regulator 3425621 8358943 Cpin_2782 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122462.1 3424740 D 485918 CDS YP_003122463.1 256421810 8358944 3425957..3427138 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein; KEGG: sat:SYN_02948 acriflavin resistance periplasmic protein; RND family efflux transporter MFP subunit 3427138 8358944 Cpin_2783 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003122463.1 3425957 D 485918 CDS YP_003122464.1 256421811 8358945 3427241..3430411 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3430411 8358945 Cpin_2784 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003122464.1 3427241 D 485918 CDS YP_003122465.1 256421812 8358946 3430445..3431869 1 NC_013132.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sus:Acid_7834 RND efflux system outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein 3431869 8358946 Cpin_2785 Chitinophaga pinensis DSM 2588 NodT family RND efflux system outer membrane lipoprotein YP_003122465.1 3430445 D 485918 CDS YP_003122466.1 256421813 8358947 complement(3432147..3432614) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0826 GNAT family acetyltransferase; N-acetyltransferase GCN5 3432614 8358947 Cpin_2786 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122466.1 3432147 R 485918 CDS YP_003122467.1 256421814 8358948 3432860..3433846 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: psp:PSPPH_3647 lipase; alpha/beta hydrolase 3433846 8358948 Cpin_2787 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003122467.1 3432860 D 485918 CDS YP_003122468.1 256421815 8358949 3434024..3434650 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bcb:BCB4264_A1902 EstC; alpha/beta hydrolase 3434650 8358949 Cpin_2788 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003122468.1 3434024 D 485918 CDS YP_003122469.1 256421816 8358950 complement(3434673..3435560) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family; AraC family transcriptional regulator 3435560 8358950 Cpin_2789 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122469.1 3434673 R 485918 CDS YP_003122470.1 256421817 8358951 3436057..3436605 1 NC_013132.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: pol:Bpro_0515 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 3436605 8358951 Cpin_2790 Chitinophaga pinensis DSM 2588 alkylhydroperoxidase YP_003122470.1 3436057 D 485918 CDS YP_003122471.1 256421818 8358952 3436636..3437559 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family; AraC family transcriptional regulator 3437559 8358952 Cpin_2791 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122471.1 3436636 D 485918 CDS YP_003122472.1 256421819 8358953 3437921..3439006 1 NC_013132.1 hypothetical protein 3439006 8358953 Cpin_2792 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122472.1 3437921 D 485918 CDS YP_003122473.1 256421820 8358954 complement(3439069..3440601) 1 NC_013132.1 PFAM: beta-lactamase; KEGG: bsu:BSU34440 penicillin-binding protein 4*; beta-lactamase 3440601 8358954 Cpin_2793 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003122473.1 3439069 R 485918 CDS YP_003122474.1 256421821 8358955 complement(3440734..3440973) 1 NC_013132.1 hypothetical protein 3440973 8358955 Cpin_2794 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122474.1 3440734 R 485918 CDS YP_003122475.1 256421822 8358956 3441362..3445312 1 NC_013132.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 3445312 8358956 Cpin_2795 Chitinophaga pinensis DSM 2588 peptidase C14 caspase catalytic subunit p20 YP_003122475.1 3441362 D 485918 CDS YP_003122476.1 256421823 8358957 complement(3445393..3448812) 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: cja:CJA_0214 glucan endo-1,3-beta-glucanase, , glu81A; coagulation factor 5/8 type domain-containing protein 3448812 8358957 Cpin_2796 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003122476.1 3445393 R 485918 CDS YP_003122477.1 256421824 8358958 3449208..3449963 1 NC_013132.1 hypothetical protein 3449963 8358958 Cpin_2797 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122477.1 3449208 D 485918 CDS YP_003122478.1 256421825 8358959 3449999..3450400 1 NC_013132.1 hypothetical protein 3450400 8358959 Cpin_2798 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122478.1 3449999 D 485918 CDS YP_003122479.1 256421826 8358960 complement(3450448..3451026) 1 NC_013132.1 hypothetical protein 3451026 8358960 Cpin_2799 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122479.1 3450448 R 485918 CDS YP_003122480.1 256421827 8358961 complement(3451254..3451652) 1 NC_013132.1 KEGG: pfl:PFL_4824 hypothetical protein; hypothetical protein 3451652 8358961 Cpin_2800 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122480.1 3451254 R 485918 CDS YP_003122481.1 256421828 8358962 complement(3451704..3453461) 1 NC_013132.1 PFAM: amidohydrolase; amidohydrolase; KEGG: mxa:MXAN_2373 M38 (beta-aspartyl dipeptidase) family protein; amidohydrolase 3453461 8358962 Cpin_2801 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003122481.1 3451704 R 485918 CDS YP_003122482.1 256421829 8358963 3453546..3454316 1 NC_013132.1 PFAM: patatin; KEGG: wsu:WS1459 hypothetical protein; patatin 3454316 8358963 Cpin_2802 Chitinophaga pinensis DSM 2588 patatin YP_003122482.1 3453546 D 485918 CDS YP_003122483.1 256421830 8358964 3454473..3455207 1 NC_013132.1 PFAM: secretory protein; KEGG: smt:Smal_3351 hypothetical protein; secretory protein 3455207 8358964 Cpin_2803 Chitinophaga pinensis DSM 2588 secretory protein YP_003122483.1 3454473 D 485918 CDS YP_003122484.1 256421831 8358965 complement(3455341..3455976) 1 NC_013132.1 hypothetical protein 3455976 8358965 Cpin_2804 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122484.1 3455341 R 485918 CDS YP_003122485.1 256421832 8358966 3456032..3457852 1 NC_013132.1 PFAM: glycoside hydrolase 15-related; KEGG: sus:Acid_2123 glycoside hydrolase 15-related protein; glycoside hydrolase 15-like protein 3457852 8358966 Cpin_2805 Chitinophaga pinensis DSM 2588 glycoside hydrolase 15-like protein YP_003122485.1 3456032 D 485918 CDS YP_003122486.1 256421833 8358967 complement(3457855..3459384) 1 NC_013132.1 PFAM: hypothetical protein; KEGG: sus:Acid_7543 periplasmic component of the Tol biopolymer transport system-like protein; hypothetical protein 3459384 8358967 Cpin_2806 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122486.1 3457855 R 485918 CDS YP_003122487.1 256421834 8358968 complement(3459570..3460496) 1 NC_013132.1 KEGG: mlo:mlr2417 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; HtrA2 peptidase 3460496 8358968 Cpin_2807 Chitinophaga pinensis DSM 2588 HtrA2 peptidase YP_003122487.1 3459570 R 485918 CDS YP_003122488.1 256421835 8358969 complement(3460652..3461644) 1 NC_013132.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: msl:Msil_3465 transcriptional regulator, AraC family; AraC family transcriptional regulator 3461644 8358969 Cpin_2808 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122488.1 3460652 R 485918 CDS YP_003122489.1 256421836 8358970 3461737..3462645 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: abu:Abu_1144 alpha/beta hydrolase protein; alpha/beta hydrolase 3462645 8358970 Cpin_2809 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003122489.1 3461737 D 485918 CDS YP_003122490.1 256421837 8358971 3462726..3462875 1 NC_013132.1 hypothetical protein 3462875 8358971 Cpin_2810 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122490.1 3462726 D 485918 CDS YP_003122491.1 256421838 8358972 complement(3463175..3463528) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bha:BH0737 cinnamoyl ester hydrolase; HxlR family transcriptional regulator 3463528 8358972 Cpin_2811 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122491.1 3463175 R 485918 CDS YP_003122492.1 256421839 8358973 3463610..3464704 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: bxe:Bxe_C0470 oxidoreductase; oxidoreductase domain-containing protein 3464704 8358973 Cpin_2812 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003122492.1 3463610 D 485918 CDS YP_003122493.1 256421840 8358974 3464782..3465144 1 NC_013132.1 hypothetical protein 3465144 8358974 Cpin_2813 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122493.1 3464782 D 485918 CDS YP_003122494.1 256421841 8358975 complement(3465174..3468305) 1 NC_013132.1 KEGG: dar:Daro_3599 WD-40 repeat-containing protein; hypothetical protein 3468305 8358975 Cpin_2814 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122494.1 3465174 R 485918 CDS YP_003122495.1 256421842 8358976 complement(3468302..3469480) 1 NC_013132.1 KEGG: reu:Reut_A2011 hypothetical protein; hypothetical protein 3469480 8358976 Cpin_2815 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122495.1 3468302 R 485918 CDS YP_003122496.1 256421843 8358977 complement(3469482..3470528) 1 NC_013132.1 KEGG: scl:sce7119 serine protease; serine protease 3470528 8358977 Cpin_2816 Chitinophaga pinensis DSM 2588 serine protease YP_003122496.1 3469482 R 485918 CDS YP_003122497.1 256421844 8358978 complement(3470544..3471608) 1 NC_013132.1 KEGG: mno:Mnod_2529 hypothetical protein; hypothetical protein 3471608 8358978 Cpin_2817 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122497.1 3470544 R 485918 CDS YP_003122498.1 256421845 8358979 3472080..3472631 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pap:PSPA7_1717 ECF subfamily RNA polymerase sigma-70 factor; ECF subfamily RNA polymerase sigma-24 subunit 3472631 8358979 Cpin_2818 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122498.1 3472080 D 485918 CDS YP_003122499.1 256421846 8358980 3472714..3473763 1 NC_013132.1 PFAM: FecR protein; KEGG: FecR protein; anti-FecI sigma factor FecR 3473763 8358980 Cpin_2819 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122499.1 3472714 D 485918 CDS YP_003122500.1 256421847 8358981 3473850..3477023 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3477023 8358981 Cpin_2820 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122500.1 3473850 D 485918 CDS YP_003122501.1 256421848 8358982 3477042..3478943 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3478943 8358982 Cpin_2821 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122501.1 3477042 D 485918 CDS YP_003122502.1 256421849 8358983 complement(3479028..3479747) 1 NC_013132.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: eck:EC55989_3266 conserved hypothetical protein, ATPase; ATPase AAA 3479747 8358983 Cpin_2822 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003122502.1 3479028 R 485918 CDS YP_003122503.1 256421850 8358984 3480237..3481130 1 NC_013132.1 PFAM: abortive infection protein; KEGG: rso:RSc3402 hypothetical protein; abortive infection protein 3481130 8358984 Cpin_2823 Chitinophaga pinensis DSM 2588 abortive infection protein YP_003122503.1 3480237 D 485918 CDS YP_003122504.1 256421851 8358985 3481559..3483355 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: swd:Swoo_1561 acyltransferase 3; acyltransferase 3 3483355 8358985 Cpin_2824 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003122504.1 3481559 D 485918 CDS YP_003122505.1 256421852 8358986 complement(3483394..3483819) 1 NC_013132.1 KEGG: pzu:PHZ_c1866 hypothetical protein; hypothetical protein 3483819 8358986 Cpin_2825 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122505.1 3483394 R 485918 CDS YP_003122506.1 256421853 8358987 complement(3483821..3484267) 1 NC_013132.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: mxa:MXAN_0213 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 3484267 8358987 Cpin_2826 Chitinophaga pinensis DSM 2588 AsnC family transcriptional regulator YP_003122506.1 3483821 R 485918 CDS YP_003122507.1 256421854 8358988 complement(3484419..3485042) 1 NC_013132.1 KEGG: bar:GBAA1404 hypothetical protein; hypothetical protein 3485042 8358988 Cpin_2827 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122507.1 3484419 R 485918 CDS YP_003122508.1 256421855 8358989 3485318..3485605 1 NC_013132.1 hypothetical protein 3485605 8358989 Cpin_2828 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122508.1 3485318 D 485918 CDS YP_003122509.1 256421856 8358990 3485816..3486808 1 NC_013132.1 KEGG: lpp:lpp0283 hypothetical protein; hypothetical protein 3486808 8358990 Cpin_2829 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122509.1 3485816 D 485918 CDS YP_003122510.1 256421857 8358991 3486810..3488174 1 NC_013132.1 KEGG: mfa:Mfla_2222 secretion protein HlyD; secretion protein HlyD 3488174 8358991 Cpin_2830 Chitinophaga pinensis DSM 2588 secretion protein HlyD YP_003122510.1 3486810 D 485918 CDS YP_003122511.1 256421858 8358992 3488206..3489657 1 NC_013132.1 KEGG: lpp:lpp0285 hypothetical protein; outer membrane protein 3489657 8358992 Cpin_2831 Chitinophaga pinensis DSM 2588 outer membrane protein YP_003122511.1 3488206 D 485918 CDS YP_003122512.1 256421859 8358993 3489833..3490216 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pag:PLES_02451 transcriptional regulator; AraC family transcriptional regulator 3490216 8358993 Cpin_2832 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122512.1 3489833 D 485918 CDS YP_003122513.1 256421860 8358994 3490263..3491138 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: ent:Ent638_1859 oxidoreductase; aldo/keto reductase 3491138 8358994 Cpin_2833 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003122513.1 3490263 D 485918 CDS YP_003122514.1 256421861 8358995 3491619..3492767 1 NC_013132.1 KEGG: ppg:PputGB1_5419 hypothetical protein; hypothetical protein 3492767 8358995 Cpin_2834 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122514.1 3491619 D 485918 CDS YP_003122515.1 256421862 8358996 3492795..3494318 1 NC_013132.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: ypy:YPK_2547 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 3494318 8358996 Cpin_2835 Chitinophaga pinensis DSM 2588 pyridoxal-dependent decarboxylase YP_003122515.1 3492795 D 485918 CDS YP_003122516.1 256421863 8358997 3494329..3496155 1 NC_013132.1 PFAM: IucA/IucC family protein; KEGG: eta:ETA_30300 probable alcaligin biosynthesis protein; IucA/IucC family protein 3496155 8358997 Cpin_2836 Chitinophaga pinensis DSM 2588 IucA/IucC family protein YP_003122516.1 3494329 D 485918 CDS YP_003122517.1 256421864 8358998 3496174..3497997 1 NC_013132.1 PFAM: IucA/IucC family protein; KEGG: bbr:BB3895 alcaligin biosynthesis protein; IucA/IucC family protein 3497997 8358998 Cpin_2837 Chitinophaga pinensis DSM 2588 IucA/IucC family protein YP_003122517.1 3496174 D 485918 CDS YP_003122518.1 256421865 8358999 3497994..3498797 1 NC_013132.1 KEGG: pol:Bpro_1612 creatininase; creatininase 3498797 8358999 Cpin_2838 Chitinophaga pinensis DSM 2588 creatininase YP_003122518.1 3497994 D 485918 CDS YP_003122519.1 256421866 8359000 3498800..3500143 1 NC_013132.1 KEGG: sme:SMa2406 RhbD rhizobactin siderophore biosynthesis protein; hypothetical protein 3500143 8359000 Cpin_2839 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122519.1 3498800 D 485918 CDS YP_003122520.1 256421867 8359001 3500121..3501449 1 NC_013132.1 KEGG: she:Shewmr4_1454 L-lysine 6-monooxygenase (NADPH); L-lysine 6-monooxygenase 3501449 8359001 Cpin_2840 Chitinophaga pinensis DSM 2588 L-lysine 6-monooxygenase YP_003122520.1 3500121 D 485918 CDS YP_003122521.1 256421868 8359002 3501468..3502874 1 NC_013132.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mxa:MXAN_7119 MATE efflux family protein; MATE efflux family protein 3502874 8359002 Cpin_2841 Chitinophaga pinensis DSM 2588 MATE efflux family protein YP_003122521.1 3501468 D 485918 CDS YP_003122522.1 256421869 8359003 3502892..3503131 1 NC_013132.1 KEGG: aha:AHA_4176 hypothetical protein; hypothetical protein 3503131 8359003 Cpin_2842 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122522.1 3502892 D 485918 CDS YP_003122523.1 256421870 8359004 3503128..3504507 1 NC_013132.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sus:Acid_1363 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3504507 8359004 Cpin_2843 Chitinophaga pinensis DSM 2588 AMP-dependent synthetase and ligase YP_003122523.1 3503128 D 485918 CDS YP_003122524.1 256421871 8359005 complement(3504596..3506944) 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mno:Mnod_8274 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3506944 8359005 Cpin_2844 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003122524.1 3504596 R 485918 CDS YP_003122525.1 256421872 8359006 3507646..3510723 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 3510723 8359006 Cpin_2845 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003122525.1 3507646 D 485918 CDS YP_003122526.1 256421873 8359007 3510734..3512197 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3512197 8359007 Cpin_2846 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122526.1 3510734 D 485918 CDS YP_003122527.1 256421874 8359008 3512229..3513374 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein; glycoside hydrolase 3513374 8359008 Cpin_2847 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122527.1 3512229 D 485918 CDS YP_003122528.1 256421875 8359009 3513376..3514536 1 NC_013132.1 KEGG: ppf:Pput_4538 exodeoxyribonuclease V, gamma subunit; hypothetical protein 3514536 8359009 Cpin_2848 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122528.1 3513376 D 485918 CDS YP_003122529.1 256421876 8359010 3514520..3516031 1 NC_013132.1 PFAM: sulfatase; KEGG: swd:Swoo_3660 sulfatase; sulfatase 3516031 8359010 Cpin_2849 Chitinophaga pinensis DSM 2588 sulfatase YP_003122529.1 3514520 D 485918 CDS YP_003122530.1 256421877 8359011 3516028..3517719 1 NC_013132.1 PFAM: sulfatase; KEGG: sus:Acid_1528 sulfatase; sulfatase 3517719 8359011 Cpin_2850 Chitinophaga pinensis DSM 2588 sulfatase YP_003122530.1 3516028 D 485918 CDS YP_003122531.1 256421878 8359012 3517750..3518808 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3518808 8359012 Cpin_2851 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122531.1 3517750 D 485918 CDS YP_003122532.1 256421879 8359013 3518849..3522877 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; helix- turn-helix- domain containing protein AraC type; histidine kinase A domain protein; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein; histidine kinase 3522877 8359013 Cpin_2852 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122532.1 3518849 D 485918 CDS YP_003122533.1 256421880 8359014 3523064..3525442 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 3525442 8359014 Cpin_2853 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122533.1 3523064 D 485918 CDS YP_003122534.1 256421881 8359015 3525719..3528454 1 NC_013132.1 KEGG: abn:AB57_3113 biofilm-associated protein; hypothetical protein 3528454 8359015 Cpin_2854 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122534.1 3525719 D 485918 CDS YP_003122535.1 256421882 8359016 3528681..3529265 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pag:PLES_16511 sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 3529265 8359016 Cpin_2855 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122535.1 3528681 D 485918 CDS YP_003122536.1 256421883 8359017 3529387..3530523 1 NC_013132.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor; anti-FecI sigma factor FecR 3530523 8359017 Cpin_2856 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122536.1 3529387 D 485918 CDS YP_003122537.1 256421884 8359018 3530707..3534153 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3534153 8359018 Cpin_2857 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122537.1 3530707 D 485918 CDS YP_003122538.1 256421885 8359019 3534140..3536080 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3536080 8359019 Cpin_2858 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122538.1 3534140 D 485918 CDS YP_003122539.1 256421886 8359020 3536114..3537349 1 NC_013132.1 hypothetical protein 3537349 8359020 Cpin_2859 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122539.1 3536114 D 485918 CDS YP_003122540.1 256421887 8359021 3537370..3538596 1 NC_013132.1 PFAM: fibronectin type III domain protein; fibronectin type III domain-containing protein 3538596 8359021 Cpin_2860 Chitinophaga pinensis DSM 2588 fibronectin type III domain-containing protein YP_003122540.1 3537370 D 485918 CDS YP_003122541.1 256421888 8359022 3538706..3541660 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: xca:xccb100_1015 exported beta-mannosidase- like glycosidase; coagulation factor 5/8 type domain-containing protein 3541660 8359022 Cpin_2861 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003122541.1 3538706 D 485918 CDS YP_003122542.1 256421889 8359023 3541657..3543930 1 NC_013132.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: hypothetical protein; glycoside hydrolase 3543930 8359023 Cpin_2862 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122542.1 3541657 D 485918 CDS YP_003122543.1 256421890 8359024 complement(3544017..3544463) 1 NC_013132.1 hypothetical protein 3544463 8359024 Cpin_2863 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122543.1 3544017 R 485918 CDS YP_003122544.1 256421891 8359025 complement(3544501..3545469) 1 NC_013132.1 KEGG: cja:CJA_3223 phytanoyl-CoA dioxygenase (PhyH) family; phytanoyl-CoA dioxygenase (PhyH) family protein 3545469 8359025 Cpin_2864 Chitinophaga pinensis DSM 2588 phytanoyl-CoA dioxygenase (PhyH) family protein YP_003122544.1 3544501 R 485918 CDS YP_003122545.1 256421892 8359026 complement(3545537..3545986) 1 NC_013132.1 PFAM: transcription activator effector binding; KEGG: bcb:BCB4264_A5068 DNA-binding protein YobU; transcription activator effector binding 3545986 8359026 Cpin_2865 Chitinophaga pinensis DSM 2588 transcription activator effector binding YP_003122545.1 3545537 R 485918 CDS YP_003122546.1 256421893 8359027 3546304..3547767 1 NC_013132.1 PFAM: glycoside hydrolase family 43; Ricin B lectin; KEGG: hypothetical protein; glycoside hydrolase 3547767 8359027 Cpin_2866 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122546.1 3546304 D 485918 CDS YP_003122547.1 256421894 8359028 3547787..3548323 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: gox:GOX0847 Rossmann fold nucleotide-binding protein; hypothetical protein 3548323 8359028 Cpin_2867 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122547.1 3547787 D 485918 CDS YP_003122548.1 256421895 8359029 complement(3548484..3548999) 1 NC_013132.1 PFAM: protein of unknown function UPF0153; KEGG: sus:Acid_3431 hypothetical protein; hypothetical protein 3548999 8359029 Cpin_2868 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122548.1 3548484 R 485918 CDS YP_003122549.1 256421896 8359030 complement(3549033..3549908) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: mlo:mlr4436 contains similarity to hydrolase; alpha/beta hydrolase 3549908 8359030 Cpin_2869 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003122549.1 3549033 R 485918 CDS YP_003122550.1 256421897 8359031 3550009..3550368 1 NC_013132.1 PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rso:RSc2322 transcription regulator protein; MerR family transcriptional regulator 3550368 8359031 Cpin_2870 Chitinophaga pinensis DSM 2588 MerR family transcriptional regulator YP_003122550.1 3550009 D 485918 CDS YP_003122551.1 256421898 8359032 complement(3550372..3550725) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU29030 hypothetical protein; HxlR family transcriptional regulator 3550725 8359032 Cpin_2871 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122551.1 3550372 R 485918 CDS YP_003122552.1 256421899 8359033 complement(3550803..3551195) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: ban:BA3462 hypothetical protein; HxlR family transcriptional regulator 3551195 8359033 Cpin_2872 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122552.1 3550803 R 485918 CDS YP_003122553.1 256421900 8359034 3551312..3552202 1 NC_013132.1 PFAM: ketopantoate reductase; KEGG: scl:sce9123 oxidoreductase; ketopantoate reductase 3552202 8359034 Cpin_2873 Chitinophaga pinensis DSM 2588 ketopantoate reductase YP_003122553.1 3551312 D 485918 CDS YP_003122554.1 256421901 8359035 3552286..3553026 1 NC_013132.1 hypothetical protein 3553026 8359035 Cpin_2874 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122554.1 3552286 D 485918 CDS YP_003122555.1 256421902 8359036 3553291..3553824 1 NC_013132.1 KEGG: eum:ECUMN_3642 cytoplasmic protein; hypothetical protein 3553824 8359036 Cpin_2875 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122555.1 3553291 D 485918 CDS YP_003122556.1 256421903 8359037 complement(3553835..3554980) 1 NC_013132.1 hypothetical protein 3554980 8359037 Cpin_2876 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122556.1 3553835 R 485918 CDS YP_003122557.1 256421904 8359038 complement(3555158..3556288) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 3556288 8359038 Cpin_2877 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122557.1 3555158 R 485918 CDS YP_003122558.1 256421905 8359039 complement(3556300..3557427) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 3557427 8359039 Cpin_2878 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122558.1 3556300 R 485918 CDS YP_003122559.1 256421906 8359040 complement(3557450..3558388) 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; coagulation factor 5/8 type domain-containing protein 3558388 8359040 Cpin_2879 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003122559.1 3557450 R 485918 CDS YP_003122560.1 256421907 8359041 complement(3558400..3559770) 1 NC_013132.1 hypothetical protein 3559770 8359041 Cpin_2880 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122560.1 3558400 R 485918 CDS YP_003122561.1 256421908 8359042 complement(3559782..3563399) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3563399 8359042 Cpin_2881 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122561.1 3559782 R 485918 CDS YP_003122562.1 256421909 8359043 complement(3563565..3564701) 1 NC_013132.1 PFAM: FecR protein; KEGG: cak:Caul_1968 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 3564701 8359043 Cpin_2882 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122562.1 3563565 R 485918 CDS YP_003122563.1 256421910 8359044 complement(3564815..3565405) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: rpt:Rpal_0706 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 3565405 8359044 Cpin_2883 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122563.1 3564815 R 485918 CDS YP_003122564.1 256421911 8359045 complement(3565658..3566434) 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: cja:CJA_3063 NUDIX hydrolase; NUDIX hydrolase 3566434 8359045 Cpin_2884 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003122564.1 3565658 R 485918 CDS YP_003122565.1 256421912 8359046 3566646..3567014 1 NC_013132.1 hypothetical protein 3567014 8359046 Cpin_2885 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122565.1 3566646 D 485918 CDS YP_003122566.1 256421913 8359047 3567231..3567995 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_0236 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 3567995 8359047 Cpin_2886 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122566.1 3567231 D 485918 CDS YP_003122567.1 256421914 8359048 3568264..3569019 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: sus:Acid_2442 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3569019 8359048 Cpin_2887 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122567.1 3568264 D 485918 CDS YP_003122568.1 256421915 8359049 complement(3569494..3569796) 1 NC_013132.1 hypothetical protein 3569796 8359049 Cpin_2888 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122568.1 3569494 R 485918 CDS YP_003122569.1 256421916 8359050 3570236..3571210 1 NC_013132.1 KEGG: GG12923 gene product from transcript GG12923- RA; hypothetical protein 3571210 8359050 Cpin_2889 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122569.1 3570236 D 485918 CDS YP_003122570.1 256421917 8359051 complement(3571364..3571762) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: maq:Maqu_2826 two component, sigma54 specific, fis family transcriptional regulator; response regulator receiver protein 3571762 8359051 Cpin_2890 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003122570.1 3571364 R 485918 CDS YP_003122571.1 256421918 8359052 complement(3571934..3572692) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_1098 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3572692 8359052 Cpin_2891 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122571.1 3571934 R 485918 CDS YP_003122572.1 256421919 8359053 complement(3573000..3573578) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 3573578 8359053 Cpin_2892 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122572.1 3573000 R 485918 CDS YP_003122573.1 256421920 8359054 3573898..3574665 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_1708 short-chain dehydrogenase/reductase SDR precursor; short-chain dehydrogenase/reductase SDR 3574665 8359054 Cpin_2893 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122573.1 3573898 D 485918 CDS YP_003122574.1 256421921 8359055 complement(3574754..3575617) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcm:Bcenmc03_6416 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3575617 8359055 Cpin_2894 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122574.1 3574754 R 485918 CDS YP_003122575.1 256421922 8359056 complement(3575683..3576267) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_0171 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 3576267 8359056 Cpin_2895 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122575.1 3575683 R 485918 CDS YP_003122576.1 256421923 8359057 3576405..3576995 1 NC_013132.1 hypothetical protein 3576995 8359057 Cpin_2896 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122576.1 3576405 D 485918 CDS YP_003122577.1 256421924 8359058 3577158..3577718 1 NC_013132.1 hypothetical protein 3577718 8359058 Cpin_2897 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122577.1 3577158 D 485918 CDS YP_003122578.1 256421925 8359059 complement(3577822..3578670) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vpa:VP1699 transcriptional regulator ExsA; AraC family transcriptional regulator 3578670 8359059 Cpin_2898 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122578.1 3577822 R 485918 CDS YP_003122579.1 256421926 8359060 complement(3579045..3579470) 1 NC_013132.1 PFAM: OsmC family protein; KEGG: xcv:XCV3060 OsmC-like protein; OsmC family protein 3579470 8359060 Cpin_2899 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003122579.1 3579045 R 485918 CDS YP_003122580.1 256421927 8359061 3579881..3580375 1 NC_013132.1 KEGG: sml:Smlt2095 transmembrane protein; transmembrane protein 3580375 8359061 Cpin_2900 Chitinophaga pinensis DSM 2588 transmembrane protein YP_003122580.1 3579881 D 485918 CDS YP_003122581.1 256421928 8359062 3580965..3581273 1 NC_013132.1 PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: dno:DNO_0446 RNA recognition motif-containing protein; RNP-1 like RNA-binding protein 3581273 8359062 Cpin_2901 Chitinophaga pinensis DSM 2588 RNP-1 like RNA-binding protein YP_003122581.1 3580965 D 485918 CDS YP_003122582.1 256421929 8359063 complement(3581509..3581688) 1 NC_013132.1 hypothetical protein 3581688 8359063 Cpin_2902 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122582.1 3581509 R 485918 CDS YP_003122583.1 256421930 8359064 complement(3582051..3582305) 1 NC_013132.1 KEGG: mrd:Mrad2831_2744 hypothetical protein; hypothetical protein 3582305 8359064 Cpin_2903 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122583.1 3582051 R 485918 CDS YP_003122584.1 256421931 8359066 3582692..3584725 1 NC_013132.1 KEGG: vco:VC0395_1004 protease; hypothetical protein 3584725 8359066 Cpin_2904 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122584.1 3582692 D 485918 CDS YP_003122585.1 256421932 8359067 complement(3584752..3585210) 1 NC_013132.1 KEGG: bba:Bd1800 hypothetical protein; hypothetical protein 3585210 8359067 Cpin_2905 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122585.1 3584752 R 485918 CDS YP_003122586.1 256421933 8359068 complement(3585698..3586273) 1 NC_013132.1 PFAM: phosphoglycerate mutase; KEGG: bcr:BCAH187_A4049 phosphoglycerate mutase family protein; phosphoglycerate mutase 3586273 8359068 Cpin_2906 Chitinophaga pinensis DSM 2588 phosphoglycerate mutase YP_003122586.1 3585698 R 485918 CDS YP_003122587.1 256421934 8359069 complement(3586331..3586999) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sat:SYN_00775 two-component response regulator; LuxR family transcriptional regulator 3586999 8359069 Cpin_2907 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003122587.1 3586331 R 485918 CDS YP_003122588.1 256421935 8359070 complement(3587058..3587798) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: reh:H16_A1985 signal transduction histidine kinase containing PAS/PAC sensor domain; histidine kinase 3587798 8359070 Cpin_2908 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122588.1 3587058 R 485918 CDS YP_003122589.1 256421936 8359071 complement(3587835..3588497) 1 NC_013132.1 hypothetical protein 3588497 8359071 Cpin_2909 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122589.1 3587835 R 485918 CDS YP_003122590.1 256421937 8359072 complement(3588522..3589034) 1 NC_013132.1 hypothetical protein 3589034 8359072 Cpin_2910 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122590.1 3588522 R 485918 CDS YP_003122591.1 256421938 8359073 3589435..3590091 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bvi:Bcep1808_0080 MarR family transcriptional regulator; MarR family transcriptional regulator 3590091 8359073 Cpin_2911 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003122591.1 3589435 D 485918 CDS YP_003122592.1 256421939 8359074 complement(3590086..3591543) 1 NC_013132.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4302 GntR family transcriptional regulator; GntR family transcriptional regulator 3591543 8359074 Cpin_2912 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003122592.1 3590086 R 485918 CDS YP_003122593.1 256421940 8359075 3591689..3591958 1 NC_013132.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dar:Daro_0401 regulatory protein, ArsR; ArsR family transcriptional regulator 3591958 8359075 Cpin_2913 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003122593.1 3591689 D 485918 CDS YP_003122594.1 256421941 8359076 3592039..3592647 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: dol:Dole_0805 TetR family transcriptional regulator; TetR family transcriptional regulator 3592647 8359076 Cpin_2914 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003122594.1 3592039 D 485918 CDS YP_003122595.1 256421942 8359077 3592705..3593943 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: outer membrane secretion protein; outer membrane efflux protein 3593943 8359077 Cpin_2915 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003122595.1 3592705 D 485918 CDS YP_003122596.1 256421943 8359078 3593963..3594895 1 NC_013132.1 KEGG: dol:Dole_0807 secretion protein HlyD family protein; secretion protein HlyD family protein 3594895 8359078 Cpin_2916 Chitinophaga pinensis DSM 2588 secretion protein HlyD family protein YP_003122596.1 3593963 D 485918 CDS YP_003122597.1 256421944 8359079 3594898..3595821 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00241 export ABC transporter ATP- binding protein; ABC transporter 3595821 8359079 Cpin_2917 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122597.1 3594898 D 485918 CDS YP_003122598.1 256421945 8359080 3595829..3596572 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_0657 ABC transporter-related protein; ABC transporter 3596572 8359080 Cpin_2918 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122598.1 3595829 D 485918 CDS YP_003122599.1 256421946 8359081 3596587..3597693 1 NC_013132.1 PFAM: ABC-2 type transporter; KEGG: gme:Gmet_3460 hypothetical protein; ABC transporter 3597693 8359081 Cpin_2919 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122599.1 3596587 D 485918 CDS YP_003122600.1 256421947 8359082 3597690..3598805 1 NC_013132.1 PFAM: ABC-2 type transporter; KEGG: dol:Dole_0811 ABC-2 type transporter; ABC transporter 3598805 8359082 Cpin_2920 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122600.1 3597690 D 485918 CDS YP_003122601.1 256421948 8359083 complement(3598875..3600302) 1 NC_013132.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: scl:sce5745 transcriptional regulator; GntR family transcriptional regulator 3600302 8359083 Cpin_2921 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003122601.1 3598875 R 485918 CDS YP_003122602.1 256421949 8359084 3600808..3601338 1 NC_013132.1 PFAM: Ada metal-binding domain protein; regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pfo:Pfl01_2158 transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S- methyltransferase; ArsR family transcriptional regulator 3601338 8359084 Cpin_2922 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003122602.1 3600808 D 485918 CDS YP_003122603.1 256421950 8359085 3601355..3602263 1 NC_013132.1 PFAM: 8-oxoguanine DNA glycosylase; HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: bcz:BCZK3499 DNA-3-methyladenine glycosidase; 8-oxoguanine DNA glycosylase 3602263 8359085 Cpin_2923 Chitinophaga pinensis DSM 2588 8-oxoguanine DNA glycosylase YP_003122603.1 3601355 D 485918 CDS YP_003122604.1 256421951 8359086 3602292..3602780 1 NC_013132.1 KEGG: mmw:Mmwyl1_0128 methylated-DNA--protein- cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3602780 8359086 Cpin_2924 Chitinophaga pinensis DSM 2588 methylated-DNA--protein-cysteine methyltransferase YP_003122604.1 3602292 D 485918 CDS YP_003122605.1 256421952 8359087 3602973..3604385 1 NC_013132.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: spe:Spro_3049 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 3604385 8359087 Cpin_2925 Chitinophaga pinensis DSM 2588 pyridoxal-dependent decarboxylase YP_003122605.1 3602973 D 485918 CDS YP_003122606.1 256421953 8359088 3604419..3605336 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cko:CKO_00983 hypothetical protein; hypothetical protein 3605336 8359088 Cpin_2926 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122606.1 3604419 D 485918 CDS YP_003122607.1 256421954 8359089 3605317..3606249 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3606249 8359089 Cpin_2927 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122607.1 3605317 D 485918 CDS YP_003122608.1 256421955 8359090 3606360..3606929 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: mmr:Mmar10_1066 NUDIX hydrolase; NUDIX hydrolase 3606929 8359090 Cpin_2928 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003122608.1 3606360 D 485918 CDS YP_003122609.1 256421956 8359091 3607031..3607822 1 NC_013132.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bcy:Bcer98_0086 RNA methyltransferase; TrmH family RNA methyltransferase 3607822 8359091 Cpin_2929 Chitinophaga pinensis DSM 2588 TrmH family RNA methyltransferase YP_003122609.1 3607031 D 485918 CDS YP_003122610.1 256421957 8359092 3607836..3608681 1 NC_013132.1 PFAM: pyruvate carboxyltransferase; KEGG: hydroxymethylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase; hydroxymethylglutaryl-CoA lyase 3608681 8359092 Cpin_2930 Chitinophaga pinensis DSM 2588 hydroxymethylglutaryl-CoA lyase YP_003122610.1 3607836 D 485918 CDS YP_003122611.1 256421958 8359093 3608691..3609671 1 NC_013132.1 PFAM: GSCFA domain protein; KEGG: hypothetical protein; GSCFA domain-containing protein 3609671 8359093 Cpin_2931 Chitinophaga pinensis DSM 2588 GSCFA domain-containing protein YP_003122611.1 3608691 D 485918 CDS YP_003122612.1 256421959 8359095 3610446..3611741 1 NC_013132.1 PFAM: amidohydrolase; amidohydrolase; KEGG: aba:Acid345_1826 Pro-Hyp dipeptidase. Metallo peptidase. MEROPS family M38; amidohydrolase 3611741 8359095 Cpin_2932 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003122612.1 3610446 D 485918 CDS YP_003122613.1 256421960 8359096 3612027..3612656 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: dal:Dalk_2333 transcriptional regulator, TetR family; TetR family transcriptional regulator 3612656 8359096 Cpin_2933 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003122613.1 3612027 D 485918 CDS YP_003122614.1 256421961 8359097 3612804..3613244 1 NC_013132.1 hypothetical protein 3613244 8359097 Cpin_2934 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122614.1 3612804 D 485918 CDS YP_003122615.1 256421962 8359098 3613298..3614038 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3614038 8359098 Cpin_2935 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122615.1 3613298 D 485918 CDS YP_003122616.1 256421963 8359099 3614172..3615278 1 NC_013132.1 hypothetical protein 3615278 8359099 Cpin_2936 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122616.1 3614172 D 485918 CDS YP_003122617.1 256421964 8359100 3615265..3615855 1 NC_013132.1 hypothetical protein 3615855 8359100 Cpin_2937 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122617.1 3615265 D 485918 CDS YP_003122618.1 256421965 8359101 complement(3615967..3617019) 1 NC_013132.1 KEGG: sdn:Sden_2209 hypothetical protein; hypothetical protein 3617019 8359101 Cpin_2938 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122618.1 3615967 R 485918 CDS YP_003122619.1 256421966 8359103 complement(3617696..3617980) 1 NC_013132.1 KEGG: bra:BRADO4096 hypothetical protein; hypothetical protein 3617980 8359103 Cpin_2940 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122619.1 3617696 R 485918 CDS YP_003122620.1 256421967 8359104 3618522..3618662 1 NC_013132.1 hypothetical protein 3618662 8359104 Cpin_2941 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122620.1 3618522 D 485918 CDS YP_003122621.1 256421968 8359105 3618764..3619582 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mlr1595 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3619582 8359105 Cpin_2942 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122621.1 3618764 D 485918 CDS YP_003122622.1 256421969 8359106 3619625..3620473 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: scl:sce3225 dehydrogenase; short-chain dehydrogenase/reductase SDR 3620473 8359106 Cpin_2943 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122622.1 3619625 D 485918 CDS YP_003122623.1 256421970 8359107 complement(3620885..3623095) 1 NC_013132.1 KEGG: mfa:Mfla_0683 ABC transporter, permease protein; hypothetical protein 3623095 8359107 Cpin_2944 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122623.1 3620885 R 485918 CDS YP_003122624.1 256421971 8359108 complement(3623092..3624036) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2644 ABC transporter, ATPase subunit; ABC transporter 3624036 8359108 Cpin_2945 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122624.1 3623092 R 485918 CDS YP_003122625.1 256421972 8359109 complement(3624115..3625545) 1 NC_013132.1 hypothetical protein 3625545 8359109 Cpin_2946 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122625.1 3624115 R 485918 CDS YP_003122626.1 256421973 8359110 complement(3625558..3629043) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3629043 8359110 Cpin_2947 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122626.1 3625558 R 485918 CDS YP_003122627.1 256421974 8359111 complement(3629293..3630489) 1 NC_013132.1 PFAM: FecR protein; KEGG: rru:Rru_A1439 FecR; anti-FecI sigma factor FecR 3630489 8359111 Cpin_2948 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122627.1 3629293 R 485918 CDS YP_003122628.1 256421975 8359112 complement(3630596..3631186) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bra:BRADO4891 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 3631186 8359112 Cpin_2949 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122628.1 3630596 R 485918 CDS YP_003122629.1 256421976 8359113 3631427..3632344 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: azo:azo3751 AraC family transcription regulator; AraC family transcriptional regulator 3632344 8359113 Cpin_2950 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122629.1 3631427 D 485918 CDS YP_003122630.1 256421977 8359114 3632420..3633184 1 NC_013132.1 PFAM: ThiJ/PfpI domain protein; KEGG: bca:BCE_2883 hypothetical protein; ThiJ/PfpI domain-containing protein 3633184 8359114 Cpin_2951 Chitinophaga pinensis DSM 2588 ThiJ/PfpI domain-containing protein YP_003122630.1 3632420 D 485918 CDS YP_003122631.1 256421978 8359115 complement(3633299..3634327) 1 NC_013132.1 PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; KEGG: scl:sce1921 endoribonucleases active with either ribo-or deoxyribonucleic acids; DNA/RNA non-specific endonuclease 3634327 8359115 Cpin_2952 Chitinophaga pinensis DSM 2588 DNA/RNA non-specific endonuclease YP_003122631.1 3633299 R 485918 CDS YP_003122632.1 256421979 8359116 3635105..3635239 1 NC_013132.1 hypothetical protein 3635239 8359116 Cpin_2953 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122632.1 3635105 D 485918 CDS YP_003122633.1 256421980 8359117 complement(3635495..3637906) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 3637906 8359117 Cpin_2954 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122633.1 3635495 R 485918 CDS YP_003122634.1 256421981 8359118 3638254..3639429 1 NC_013132.1 KEGG: mxa:MXAN_2791 protease B; hypothetical protein 3639429 8359118 Cpin_2955 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122634.1 3638254 D 485918 CDS YP_003122635.1 256421982 8359119 complement(3639517..3641811) 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: xcv:XCV3213 sugar hydrolase; alpha-1,2-mannosidase 3641811 8359119 Cpin_2956 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003122635.1 3639517 R 485918 CDS YP_003122636.1 256421983 8359120 complement(3641887..3643005) 1 NC_013132.1 PFAM: monooxygenase FAD-binding; KEGG: cak:Caul_0549 monooxygenase FAD-binding; FAD-binding monooxygenase 3643005 8359120 Cpin_2957 Chitinophaga pinensis DSM 2588 FAD-binding monooxygenase YP_003122636.1 3641887 R 485918 CDS YP_003122637.1 256421984 8359121 complement(3643086..3643979) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator 3643979 8359121 Cpin_2958 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122637.1 3643086 R 485918 CDS YP_003122638.1 256421985 8359122 3644139..3644594 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU03080 hypothetical protein; MarR family transcriptional regulator 3644594 8359122 Cpin_2959 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003122638.1 3644139 D 485918 CDS YP_003122639.1 256421986 8359123 3644612..3647212 1 NC_013132.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; KEGG: bca:BCE_3137 phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 3647212 8359123 Cpin_2960 Chitinophaga pinensis DSM 2588 phosphoenolpyruvate synthase YP_003122639.1 3644612 D 485918 CDS YP_003122640.1 256421987 8359124 complement(3647312..3649093) 1 NC_013132.1 PFAM: mechanosensitive ion channel MscS; KEGG: gsu:GSU1723 mechanosensitive ion channel family protein; mechanosensitive ion channel protein MscS 3649093 8359124 Cpin_2961 Chitinophaga pinensis DSM 2588 mechanosensitive ion channel protein MscS YP_003122640.1 3647312 R 485918 CDS YP_003122641.1 256421988 8359125 complement(3649238..3653101) 1 NC_013132.1 KEGG: gur:Gura_2254 PKD domain-containing protein; hypothetical protein 3653101 8359125 Cpin_2962 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122641.1 3649238 R 485918 CDS YP_003122642.1 256421989 8359126 complement(3653403..3654269) 1 NC_013132.1 PFAM: protein of unknown function DUF808; KEGG: tdn:Suden_1370 hypothetical protein; hypothetical protein 3654269 8359126 Cpin_2963 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122642.1 3653403 R 485918 CDS YP_003122643.1 256421990 8359127 complement(3654423..3655655) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: sfv:SFV_2391 hypothetical protein; major facilitator superfamily protein 3655655 8359127 Cpin_2964 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003122643.1 3654423 R 485918 CDS YP_003122644.1 256421991 8359128 complement(3655744..3656568) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator 3656568 8359128 Cpin_2965 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122644.1 3655744 R 485918 CDS YP_003122645.1 256421992 8359129 complement(3656721..3658322) 1 NC_013132.1 KEGG: ypm:YP_1161 hypothetical protein; hypothetical protein 3658322 8359129 Cpin_2966 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122645.1 3656721 R 485918 CDS YP_003122646.1 256421993 8359130 complement(3658495..3661011) 1 NC_013132.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_6519 hypothetical protein; hypothetical protein 3661011 8359130 Cpin_2967 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122646.1 3658495 R 485918 CDS YP_003122647.1 256421994 8359131 complement(3661118..3661705) 1 NC_013132.1 TIGRFAM: metal dependent phophohydrolase; KEGG: pfl:PFL_5886 HDIG domain-containing protein; metal dependent phophohydrolase 3661705 8359131 Cpin_2968 Chitinophaga pinensis DSM 2588 metal dependent phophohydrolase YP_003122647.1 3661118 R 485918 CDS YP_003122648.1 256421995 8359132 complement(3661725..3663401) 1 NC_013132.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; PA14 domain protein; sulfatase; metalloenzyme domain protein; SMART: PA14 domain protein; KEGG: spe:Spro_0294 coagulation factor 5/8 type domain-containing protein; type I phosphodiesterase/nucleotide pyrophosphatase 3663401 8359132 Cpin_2969 Chitinophaga pinensis DSM 2588 type I phosphodiesterase/nucleotide pyrophosphatase YP_003122648.1 3661725 R 485918 CDS YP_003122649.1 256421996 8359134 3664975..3667542 1 NC_013132.1 PFAM: glycoside hydrolase family 43; carbohydrate-binding protein; protein of unknown function DUF1080; SMART: cellulose binding type IV; KEGG: sde:Sde_0216 hypothetical protein; glycoside hydrolase 3667542 8359134 Cpin_2971 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122649.1 3664975 D 485918 CDS YP_003122650.1 256421997 8359135 complement(3667583..3668029) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_04843 histone acetyltransferase HPA2- like acetyltransferase; N-acetyltransferase GCN5 3668029 8359135 Cpin_2972 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122650.1 3667583 R 485918 CDS YP_003122651.1 256421998 8359136 complement(3668039..3668569) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein; N-acetyltransferase GCN5 3668569 8359136 Cpin_2973 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003122651.1 3668039 R 485918 CDS YP_003122652.1 256421999 8359137 3668709..3669095 1 NC_013132.1 hypothetical protein 3669095 8359137 Cpin_2974 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122652.1 3668709 D 485918 CDS YP_003122653.1 256422000 8359138 3669224..3669790 1 NC_013132.1 hypothetical protein 3669790 8359138 Cpin_2975 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122653.1 3669224 D 485918 CDS YP_003122654.1 256422001 8359139 3669974..3670672 1 NC_013132.1 KEGG: ajs:Ajs_1029 hypothetical protein; hypothetical protein 3670672 8359139 Cpin_2976 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122654.1 3669974 D 485918 CDS YP_003122655.1 256422002 8359140 complement(3670751..3671242) 1 NC_013132.1 PFAM: Domain of unknown function DUF1877; KEGG: dal:Dalk_5077 domain of unknown function DUF1877; hypothetical protein 3671242 8359140 Cpin_2977 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122655.1 3670751 R 485918 CDS YP_003122656.1 256422003 8359141 complement(3671318..3673684) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_3505 ABC transporter, permease protein; hypothetical protein 3673684 8359141 Cpin_2978 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122656.1 3671318 R 485918 CDS YP_003122657.1 256422004 8359142 complement(3673881..3675323) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: sml:Smlt4512 exported protease; alpha/beta hydrolase 3675323 8359142 Cpin_2979 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003122657.1 3673881 R 485918 CDS YP_003122658.1 256422005 8359143 complement(3675375..3676181) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1690 hypothetical protein; AraC family transcriptional regulator 3676181 8359143 Cpin_2980 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122658.1 3675375 R 485918 CDS YP_003122659.1 256422006 8359145 3676913..3677476 1 NC_013132.1 KEGG: bcr:BCAH187_A0210 hypothetical protein; hypothetical protein 3677476 8359145 Cpin_2982 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122659.1 3676913 D 485918 CDS YP_003122660.1 256422007 8359146 complement(3677534..3678100) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3678100 8359146 Cpin_2983 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122660.1 3677534 R 485918 CDS YP_003122661.1 256422008 8359147 complement(3678188..3679189) 1 NC_013132.1 hypothetical protein 3679189 8359147 Cpin_2984 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122661.1 3678188 R 485918 CDS YP_003122662.1 256422009 8359148 complement(3679282..3680361) 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: sus:Acid_2401 delta-9 acyl-phospholipid desaturase; fatty acid desaturase 3680361 8359148 Cpin_2985 Chitinophaga pinensis DSM 2588 fatty acid desaturase YP_003122662.1 3679282 R 485918 CDS YP_003122663.1 256422010 8359149 3680844..3681602 1 NC_013132.1 hypothetical protein 3681602 8359149 Cpin_2986 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122663.1 3680844 D 485918 CDS YP_003122664.1 256422011 8359150 3682058..3682333 1 NC_013132.1 hypothetical protein 3682333 8359150 Cpin_2987 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122664.1 3682058 D 485918 CDS YP_003122665.1 256422012 8359151 3682359..3683159 1 NC_013132.1 hypothetical protein 3683159 8359151 Cpin_2988 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122665.1 3682359 D 485918 CDS YP_003122666.1 256422013 8359152 complement(3683115..3685007) 1 NC_013132.1 KEGG: pmr:PMI1466 fimbrial outer membrane usher protein; hypothetical protein 3685007 8359152 Cpin_2989 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122666.1 3683115 R 485918 CDS YP_003122667.1 256422014 8359153 complement(3685017..3690596) 1 NC_013132.1 hypothetical protein 3690596 8359153 Cpin_2990 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122667.1 3685017 R 485918 CDS YP_003122668.1 256422015 8359154 complement(3690613..3694002) 1 NC_013132.1 hypothetical protein 3694002 8359154 Cpin_2991 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122668.1 3690613 R 485918 CDS YP_003122669.1 256422016 8359155 complement(3693999..3697442) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3697442 8359155 Cpin_2992 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122669.1 3693999 R 485918 CDS YP_003122670.1 256422017 8359156 complement(3697445..3698980) 1 NC_013132.1 KEGG: noc:Noc_1844 hypothetical protein; hypothetical protein 3698980 8359156 Cpin_2993 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122670.1 3697445 R 485918 CDS YP_003122671.1 256422018 8359157 complement(3698989..3699384) 1 NC_013132.1 hypothetical protein 3699384 8359157 Cpin_2994 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122671.1 3698989 R 485918 CDS YP_003122672.1 256422019 8359158 complement(3699772..3701256) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: bba:Bd2344 hypothetical protein; major facilitator superfamily protein 3701256 8359158 Cpin_2995 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003122672.1 3699772 R 485918 CDS YP_003122673.1 256422020 8359159 3701428..3703668 1 NC_013132.1 PFAM: patatin; KEGG: pau:PA14_20870 hypothetical protein; patatin 3703668 8359159 Cpin_2996 Chitinophaga pinensis DSM 2588 patatin YP_003122673.1 3701428 D 485918 CDS YP_003122674.1 256422021 8359160 complement(3703665..3704261) 1 NC_013132.1 PFAM: tRNA-hydroxylase; KEGG: ade:Adeh_0296 tRNA-(MS(2)IO(6)A)-hydroxylase- like; tRNA-hydroxylase 3704261 8359160 Cpin_2997 Chitinophaga pinensis DSM 2588 tRNA-hydroxylase YP_003122674.1 3703665 R 485918 CDS YP_003122675.1 256422022 8359161 3704288..3705397 1 NC_013132.1 PFAM: aminotransferase class I and II; aminotransferase class-III; glycine hydroxymethyltransferase; aminotransferase class V; KEGG: aminotransferase; 8-amino-7-oxononanoate synthase 3705397 8359161 Cpin_2998 Chitinophaga pinensis DSM 2588 8-amino-7-oxononanoate synthase YP_003122675.1 3704288 D 485918 CDS YP_003122676.1 256422023 8359162 3705450..3707873 1 NC_013132.1 PFAM: peptidase S45 penicillin amidase; KEGG: bce:BC3254 penicillin acylase II; peptidase S45 penicillin amidase 3707873 8359162 Cpin_2999 Chitinophaga pinensis DSM 2588 peptidase S45 penicillin amidase YP_003122676.1 3705450 D 485918 CDS YP_003122677.1 256422024 8359163 complement(3707930..3709579) 1 NC_013132.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase; resolvase domain-containing protein 3709579 8359163 Cpin_3000 Chitinophaga pinensis DSM 2588 resolvase domain-containing protein YP_003122677.1 3707930 R 485918 CDS YP_003122678.1 256422025 8359165 complement(3709624..3709854) 1 NC_013132.1 hypothetical protein 3709854 8359165 Cpin_3001 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122678.1 3709624 R 485918 CDS YP_003122679.1 256422026 8359166 complement(3710156..3711466) 1 NC_013132.1 KEGG: bcr:BCAH187_A1096 hypothetical protein; hypothetical protein 3711466 8359166 Cpin_3002 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122679.1 3710156 R 485918 CDS YP_003122680.1 256422027 8359167 complement(3711794..3712756) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ypm:YP_2632 two-component sensor histidine kinase; histidine kinase 3712756 8359167 Cpin_3003 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122680.1 3711794 R 485918 CDS YP_003122681.1 256422028 8359168 3713452..3713859 1 NC_013132.1 hypothetical protein 3713859 8359168 Cpin_3004 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122681.1 3713452 D 485918 CDS YP_003122682.1 256422029 8359169 3714089..3715504 1 NC_013132.1 KEGG: similar to KIAA0619 protein; K04514 Rho- associated, coiled-coil containing protein kinase; hypothetical protein 3715504 8359169 Cpin_3005 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122682.1 3714089 D 485918 CDS YP_003122683.1 256422030 8359170 3715534..3719325 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 3719325 8359170 Cpin_3006 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122683.1 3715534 D 485918 CDS YP_003122684.1 256422031 8359171 3719336..3720847 1 NC_013132.1 hypothetical protein 3720847 8359171 Cpin_3007 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122684.1 3719336 D 485918 CDS YP_003122685.1 256422032 8359172 3720930..3723671 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3723671 8359172 Cpin_3008 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122685.1 3720930 D 485918 CDS YP_003122686.1 256422033 8359173 3723697..3724239 1 NC_013132.1 hypothetical protein 3724239 8359173 Cpin_3009 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122686.1 3723697 D 485918 CDS YP_003122687.1 256422034 8359174 3724444..3725238 1 NC_013132.1 KEGG: pag:PLES_44931 hypothetical protein; hypothetical protein 3725238 8359174 Cpin_3010 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122687.1 3724444 D 485918 CDS YP_003122688.1 256422035 8359175 3725503..3726903 1 NC_013132.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: aba:Acid345_0287 polysaccharide deacetylase; peptidase C14 caspase catalytic subunit p20 3726903 8359175 Cpin_3011 Chitinophaga pinensis DSM 2588 peptidase C14 caspase catalytic subunit p20 YP_003122688.1 3725503 D 485918 CDS YP_003122689.1 256422036 8359176 complement(3727123..3728151) 1 NC_013132.1 KEGG: ecv:APECO1_O1CoBM78 hypothetical protein; hypothetical protein 3728151 8359176 Cpin_3012 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122689.1 3727123 R 485918 CDS YP_003122690.1 256422037 8359177 complement(3728136..3729698) 1 NC_013132.1 KEGG: plu:plu0598 hypothetical protein; hypothetical protein 3729698 8359177 Cpin_3013 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122690.1 3728136 R 485918 CDS YP_003122691.1 256422038 8359178 3730649..3732025 1 NC_013132.1 PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: esa:ESA_00785 hypothetical protein; heat shock protein DnaJ domain-containing protein 3732025 8359178 Cpin_3014 Chitinophaga pinensis DSM 2588 heat shock protein DnaJ domain-containing protein YP_003122691.1 3730649 D 485918 CDS YP_003122692.1 256422039 8359179 3732310..3733011 1 NC_013132.1 KEGG: mes:Meso_4410 competence protein; competence protein 3733011 8359179 Cpin_3015 Chitinophaga pinensis DSM 2588 competence protein YP_003122692.1 3732310 D 485918 CDS YP_003122693.1 256422040 8359180 3733411..3734472 1 NC_013132.1 PFAM: integrase catalytic region; KEGG: gdi:GDI2757 integrase; integrase catalytic subunit 3734472 8359180 Cpin_3016 Chitinophaga pinensis DSM 2588 integrase catalytic subunit YP_003122693.1 3733411 D 485918 CDS YP_003122694.1 256422041 8359181 complement(3734637..3736046) 1 NC_013132.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sfu:Sfum_1456 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 3736046 8359181 Cpin_3017 Chitinophaga pinensis DSM 2588 NodT family RND efflux system outer membrane lipoprotein YP_003122694.1 3734637 R 485918 CDS YP_003122695.1 256422042 8359182 complement(3736065..3739241) 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3739241 8359182 Cpin_3018 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003122695.1 3736065 R 485918 CDS YP_003122696.1 256422043 8359183 complement(3739258..3740394) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pmr:PMI0132 multidrug efflux protein; RND family efflux transporter MFP subunit 3740394 8359183 Cpin_3019 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003122696.1 3739258 R 485918 CDS YP_003122697.1 256422044 8359184 complement(3740433..3741005) 1 NC_013132.1 PFAM: protein of unknown function DUF420; KEGG: bsu:BSU19140 hypothetical protein; hypothetical protein 3741005 8359184 Cpin_3020 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122697.1 3740433 R 485918 CDS YP_003122698.1 256422045 8359185 3741232..3742350 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: esa:ESA_02984 hypothetical protein; AraC family transcriptional regulator 3742350 8359185 Cpin_3021 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122698.1 3741232 D 485918 CDS YP_003122699.1 256422046 8359186 complement(3742409..3742870) 1 NC_013132.1 PFAM: DoxX family protein; KEGG: afw:Anae109_4189 DoxX family protein; DoxX family protein 3742870 8359186 Cpin_3022 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003122699.1 3742409 R 485918 CDS YP_003122700.1 256422047 8359187 complement(3742885..3743580) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: slo:Shew_0949 redoxin domain-containing protein; alkyl hydroperoxide reductase 3743580 8359187 Cpin_3023 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122700.1 3742885 R 485918 CDS YP_003122701.1 256422048 8359188 3743826..3744137 1 NC_013132.1 KEGG: ilo:IL0782 hypothetical protein; hypothetical protein 3744137 8359188 Cpin_3024 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122701.1 3743826 D 485918 CDS YP_003122702.1 256422049 8359189 3744160..3744528 1 NC_013132.1 hypothetical protein 3744528 8359189 Cpin_3025 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122702.1 3744160 D 485918 CDS YP_003122703.1 256422050 8359190 complement(3744654..3744860) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3744860 8359190 Cpin_3026 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122703.1 3744654 R 485918 CDS YP_003122704.1 256422051 8359191 3745081..3745761 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3745761 8359191 Cpin_3027 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122704.1 3745081 D 485918 CDS YP_003122705.1 256422052 8359192 3745768..3746250 1 NC_013132.1 hypothetical protein 3746250 8359192 Cpin_3028 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122705.1 3745768 D 485918 CDS YP_003122706.1 256422053 8359195 complement(3746834..3747502) 1 NC_013132.1 hypothetical protein 3747502 8359195 Cpin_3030 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122706.1 3746834 R 485918 CDS YP_003122707.1 256422054 8359196 complement(3747519..3747785) 1 NC_013132.1 hypothetical protein 3747785 8359196 Cpin_3031 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122707.1 3747519 R 485918 CDS YP_003122708.1 256422055 8359197 complement(3747813..3748049) 1 NC_013132.1 KEGG: Os10g0497900; hypothetical protein; hypothetical protein 3748049 8359197 Cpin_3032 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122708.1 3747813 R 485918 CDS YP_003122709.1 256422056 8359199 3748531..3748875 1 NC_013132.1 hypothetical protein 3748875 8359199 Cpin_3034 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122709.1 3748531 D 485918 CDS YP_003122710.1 256422057 8359200 3749076..3749333 1 NC_013132.1 KEGG: reu:Reut_A2922 hypothetical protein; hypothetical protein 3749333 8359200 Cpin_3035 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122710.1 3749076 D 485918 CDS YP_003122711.1 256422058 8359201 3749353..3749541 1 NC_013132.1 hypothetical protein 3749541 8359201 Cpin_3036 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122711.1 3749353 D 485918 CDS YP_003122712.1 256422059 8359202 3749543..3750106 1 NC_013132.1 hypothetical protein 3750106 8359202 Cpin_3037 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122712.1 3749543 D 485918 CDS YP_003122713.1 256422060 8359203 complement(3750203..3750772) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; K03564 peroxiredoxin Q/BCP; alkyl hydroperoxide reductase 3750772 8359203 Cpin_3038 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122713.1 3750203 R 485918 CDS YP_003122714.1 256422061 8359204 3750950..3751657 1 NC_013132.1 PFAM: hypothetical protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: mmw:Mmwyl1_0941 helix-turn-helix type 11 domain-containing protein; hypothetical protein 3751657 8359204 Cpin_3039 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122714.1 3750950 D 485918 CDS YP_003122715.1 256422062 8359205 3751708..3753972 1 NC_013132.1 PFAM: ABC transporter related; KEGG: acb:A1S_1749 ABC transporter-like protein; ABC transporter 3753972 8359205 Cpin_3040 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122715.1 3751708 D 485918 CDS YP_003122716.1 256422063 8359206 complement(3754002..3754361) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: smt:Smal_2474 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 3754361 8359206 Cpin_3041 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122716.1 3754002 R 485918 CDS YP_003122717.1 256422064 8359207 3754490..3755284 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: reh:H16_B1990 oxidoreductase; short-chain dehydrogenase/reductase SDR 3755284 8359207 Cpin_3042 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122717.1 3754490 D 485918 CDS YP_003122718.1 256422065 8359208 3755427..3756038 1 NC_013132.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: reu:Reut_B5135 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 3756038 8359208 Cpin_3043 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003122718.1 3755427 D 485918 CDS YP_003122719.1 256422066 8359209 3756173..3757009 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: hch:HCH_03068 lysophospholipase; alpha/beta hydrolase 3757009 8359209 Cpin_3044 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003122719.1 3756173 D 485918 CDS YP_003122720.1 256422067 8359211 3757728..3758330 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bav:BAV1125 RNA polymerase sigma-E factor; ECF subfamily RNA polymerase sigma-24 subunit 3758330 8359211 Cpin_3046 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122720.1 3757728 D 485918 CDS YP_003122721.1 256422068 8359212 3758399..3759592 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1453 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 3759592 8359212 Cpin_3047 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122721.1 3758399 D 485918 CDS YP_003122722.1 256422069 8359213 3759768..3763430 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3763430 8359213 Cpin_3048 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122722.1 3759768 D 485918 CDS YP_003122723.1 256422070 8359214 3763442..3764869 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 3764869 8359214 Cpin_3049 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122723.1 3763442 D 485918 CDS YP_003122724.1 256422071 8359215 3764897..3765820 1 NC_013132.1 hypothetical protein 3765820 8359215 Cpin_3050 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122724.1 3764897 D 485918 CDS YP_003122725.1 256422072 8359216 3765960..3766889 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: noc:Noc_2644 ABC transporter, ATPase subunit; ABC transporter 3766889 8359216 Cpin_3051 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122725.1 3765960 D 485918 CDS YP_003122726.1 256422073 8359217 3766911..3769214 1 NC_013132.1 KEGG: mca:MCA3077 ABC transporter, permease protein; copper ABC transporter permease 3769214 8359217 Cpin_3052 Chitinophaga pinensis DSM 2588 copper ABC transporter permease YP_003122726.1 3766911 D 485918 CDS YP_003122727.1 256422074 8359218 3769229..3770581 1 NC_013132.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: sdy:SDY_2933 DNA mismatch repair protein; DNA mismatch repair protein MutS 3770581 8359218 Cpin_3053 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutS YP_003122727.1 3769229 D 485918 CDS YP_003122728.1 256422075 8359219 3770578..3771891 1 NC_013132.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: bba:Bd2912 MutS-like mismatch repair protein, ATPase; DNA mismatch repair protein MutS domain-containing protein 3771891 8359219 Cpin_3054 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutS domain-containing protein YP_003122728.1 3770578 D 485918 CDS YP_003122729.1 256422076 8359220 3771942..3774755 1 NC_013132.1 PFAM: peptidase M16 domain protein; KEGG: hypothetical protein; peptidase M16 domain-containing protein 3774755 8359220 Cpin_3055 Chitinophaga pinensis DSM 2588 peptidase M16 domain-containing protein YP_003122729.1 3771942 D 485918 CDS YP_003122730.1 256422077 8359221 3774990..3776621 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 3776621 8359221 Cpin_3056 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122730.1 3774990 D 485918 CDS YP_003122731.1 256422078 8359222 3776676..3777236 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: vvu:VV1_0729 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase; Crp/Fnr family transcriptional regulator 3777236 8359222 Cpin_3057 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122731.1 3776676 D 485918 CDS YP_003122732.1 256422079 8359223 3777347..3777664 1 NC_013132.1 KEGG: xca:xccb100_4315 lactoylglutathione lyase; lactoylglutathione lyase 3777664 8359223 Cpin_3058 Chitinophaga pinensis DSM 2588 lactoylglutathione lyase YP_003122732.1 3777347 D 485918 CDS YP_003122733.1 256422080 8359228 complement(3779731..3779931) 1 NC_013132.1 hypothetical protein 3779931 8359228 Cpin_3063 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122733.1 3779731 R 485918 CDS YP_003122734.1 256422081 8359229 complement(3779991..3781256) 1 NC_013132.1 KEGG: vpa:VP2715 aspartate kinase III; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase 3781256 8359229 Cpin_3064 Chitinophaga pinensis DSM 2588 aspartate kinase YP_003122734.1 3779991 R 485918 CDS YP_003122735.1 256422082 8359230 3781435..3782439 1 NC_013132.1 PFAM: inositol phosphatase/fructose-16- bisphosphatase; KEGG: vfi:VF_0264 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase 3782439 8359230 Cpin_3065 Chitinophaga pinensis DSM 2588 inositol phosphatase/fructose-16-bisphosphatase YP_003122735.1 3781435 D 485918 CDS YP_003122736.1 256422083 8359231 3782540..3783070 1 NC_013132.1 PFAM: SCP-like extracellular; KEGG: lpf:lpl0910 hypothetical protein; hypothetical protein 3783070 8359231 Cpin_3066 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122736.1 3782540 D 485918 CDS YP_003122737.1 256422084 8359232 3783332..3784096 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0284 ABC transporter, ATPase subunit; ABC transporter 3784096 8359232 Cpin_3067 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122737.1 3783332 D 485918 CDS YP_003122738.1 256422085 8359233 3784145..3784687 1 NC_013132.1 KEGG: bca:BCE_2729 metal-dependent hydrolase; metal-dependent hydrolase 3784687 8359233 Cpin_3068 Chitinophaga pinensis DSM 2588 metal-dependent hydrolase YP_003122738.1 3784145 D 485918 CDS YP_003122739.1 256422086 8359234 3784706..3785272 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: hydrolase protein; NUDIX hydrolase 3785272 8359234 Cpin_3069 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003122739.1 3784706 D 485918 CDS YP_003122740.1 256422087 8359235 complement(3785872..3787158) 1 NC_013132.1 KEGG: gur:Gura_3277 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 3787158 8359235 Cpin_3070 Chitinophaga pinensis DSM 2588 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_003122740.1 3785872 R 485918 CDS YP_003122741.1 256422088 8359236 complement(3787245..3788714) 1 NC_013132.1 hypothetical protein 3788714 8359236 Cpin_3071 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122741.1 3787245 R 485918 CDS YP_003122742.1 256422089 8359237 complement(3788844..3789728) 1 NC_013132.1 KEGG: ngk:NGK_1616 TonB; hypothetical protein 3789728 8359237 Cpin_3072 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122742.1 3788844 R 485918 CDS YP_003122743.1 256422090 8359238 3789958..3791196 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: ade:Adeh_4255 major facilitator transporter; major facilitator superfamily protein 3791196 8359238 Cpin_3073 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003122743.1 3789958 D 485918 CDS YP_003122744.1 256422091 8359239 complement(3791341..3792636) 1 NC_013132.1 PFAM: Radical SAM domain protein; KEGG: sfu:Sfum_1766 radical SAM domain protein; radical SAM protein 3792636 8359239 Cpin_3074 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003122744.1 3791341 R 485918 CDS YP_003122745.1 256422092 8359240 complement(3792685..3793287) 1 NC_013132.1 hypothetical protein 3793287 8359240 Cpin_3075 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122745.1 3792685 R 485918 CDS YP_003122746.1 256422093 8359241 complement(3793407..3794510) 1 NC_013132.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: bba:Bd0356 arginase (fragment); arginase/agmatinase/formiminoglutamase 3794510 8359241 Cpin_3076 Chitinophaga pinensis DSM 2588 arginase/agmatinase/formiminoglutamase YP_003122746.1 3793407 R 485918 CDS YP_003122747.1 256422094 8359242 3794769..3795161 1 NC_013132.1 KEGG: mag:amb4199 cytochrome C biogenesis protein CcmE; hypothetical protein 3795161 8359242 Cpin_3077 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122747.1 3794769 D 485918 CDS YP_003122748.1 256422095 8359243 3795247..3797757 1 NC_013132.1 PFAM: cytochrome C assembly protein; KEGG: mgm:Mmc1_3502 cytochrome C assembly protein; cytochrome C assembly protein 3797757 8359243 Cpin_3078 Chitinophaga pinensis DSM 2588 cytochrome C assembly protein YP_003122748.1 3795247 D 485918 CDS YP_003122749.1 256422096 8359244 3797824..3798828 1 NC_013132.1 KEGG: gdj:Gdia_1187 hypothetical protein; hypothetical protein 3798828 8359244 Cpin_3079 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122749.1 3797824 D 485918 CDS YP_003122750.1 256422097 8359245 complement(3799441..3799605) 1 NC_013132.1 hypothetical protein 3799605 8359245 Cpin_3080 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122750.1 3799441 R 485918 CDS YP_003122751.1 256422098 8359246 3800139..3800762 1 NC_013132.1 hypothetical protein 3800762 8359246 Cpin_3081 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122751.1 3800139 D 485918 CDS YP_003122752.1 256422099 8359247 3800858..3801373 1 NC_013132.1 KEGG: hslU; heat shock protein HslVU, ATPase subunit HslU; hypothetical protein 3801373 8359247 Cpin_3082 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122752.1 3800858 D 485918 CDS YP_003122753.1 256422100 8359248 3801414..3802145 1 NC_013132.1 PFAM: LmbE family protein; KEGG: hypothetical protein; LmbE family protein 3802145 8359248 Cpin_3083 Chitinophaga pinensis DSM 2588 LmbE family protein YP_003122753.1 3801414 D 485918 CDS YP_003122754.1 256422101 8359249 complement(3802617..3802736) 1 NC_013132.1 hypothetical protein 3802736 8359249 Cpin_3084 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122754.1 3802617 R 485918 CDS YP_003122755.1 256422102 8359250 3803079..3803633 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: mxa:MXAN_1564 alkyl hydroperoxide reductase C; alkyl hydroperoxide reductase 3803633 8359250 Cpin_3085 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122755.1 3803079 D 485918 CDS YP_003122756.1 256422103 8359251 3803721..3804308 1 NC_013132.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: bid:Bind_2431 alkylhydroperoxidase; alkylhydroperoxidase 3804308 8359251 Cpin_3086 Chitinophaga pinensis DSM 2588 alkylhydroperoxidase YP_003122756.1 3803721 D 485918 CDS YP_003122757.1 256422104 8359252 3804556..3804792 1 NC_013132.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: nmu:Nmul_A2139 ribosomal protein L28; 50S ribosomal protein L28 3804792 8359252 Cpin_3087 Chitinophaga pinensis DSM 2588 50S ribosomal protein L28 YP_003122757.1 3804556 D 485918 CDS YP_003122758.1 256422105 8359253 3804825..3805007 1 NC_013132.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: predicted protein; 50S ribosomal protein L33 3805007 8359253 Cpin_3088 Chitinophaga pinensis DSM 2588 50S ribosomal protein L33 YP_003122758.1 3804825 D 485918 CDS YP_003122759.1 256422106 8359254 3805119..3805292 1 NC_013132.1 hypothetical protein 3805292 8359254 Cpin_3089 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122759.1 3805119 D 485918 CDS YP_003122760.1 256422107 8359255 3805531..3806493 1 NC_013132.1 KEGG: gsu:GSU1132 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 3806493 8359255 Cpin_3090 Chitinophaga pinensis DSM 2588 signal recognition particle-docking protein FtsY YP_003122760.1 3805531 D 485918 CDS YP_003122761.1 256422108 8359256 3806712..3807587 1 NC_013132.1 KEGG: mxa:MXAN_4411 JmjC domain protein; hypothetical protein 3807587 8359256 Cpin_3091 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122761.1 3806712 D 485918 CDS YP_003122762.1 256422109 8359257 3807845..3809152 1 NC_013132.1 KEGG: mxa:MXAN_1476 MiaB-like tRNA modifying enzyme YliG, TIGR01125; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 3809152 8359257 Cpin_3092 Chitinophaga pinensis DSM 2588 MiaB-like tRNA modifying protein YliG YP_003122762.1 3807845 D 485918 CDS YP_003122763.1 256422110 8359258 3809276..3811021 1 NC_013132.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dal:Dalk_0137 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3811021 8359258 Cpin_3093 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003122763.1 3809276 D 485918 CDS YP_003122764.1 256422111 8359259 3811277..3813217 1 NC_013132.1 KEGG: sfu:Sfum_3451 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase all-beta; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan branching protein 3813217 8359259 Cpin_3094 Chitinophaga pinensis DSM 2588 1,4-alpha-glucan branching protein YP_003122764.1 3811277 D 485918 CDS YP_003122765.1 256422112 8359260 3813370..3814266 1 NC_013132.1 KEGG: ade:Adeh_2141 hypothetical protein; hypothetical protein 3814266 8359260 Cpin_3095 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122765.1 3813370 D 485918 CDS YP_003122766.1 256422113 8359261 3814365..3814979 1 NC_013132.1 PFAM: MORN variant repeat protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein; MORN repeat-containing protein 3814979 8359261 Cpin_3096 Chitinophaga pinensis DSM 2588 MORN repeat-containing protein YP_003122766.1 3814365 D 485918 CDS YP_003122767.1 256422114 8359262 complement(3815173..3815841) 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: nis:NIS_1417 PAP2 family phosphoesterase; PA-phosphatase-like phosphoesterase 3815841 8359262 Cpin_3097 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003122767.1 3815173 R 485918 CDS YP_003122768.1 256422115 8359263 complement(3815957..3816358) 1 NC_013132.1 KEGG: xcb:XC_1289 hypothetical protein; hypothetical protein 3816358 8359263 Cpin_3098 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122768.1 3815957 R 485918 CDS YP_003122769.1 256422116 8359264 complement(3816901..3819294) 1 NC_013132.1 PFAM: glycoside hydrolase family 31; KEGG: aba:Acid345_0650 alpha-glucosidase; alpha-glucosidase 3819294 8359264 Cpin_3099 Chitinophaga pinensis DSM 2588 alpha-glucosidase YP_003122769.1 3816901 R 485918 CDS YP_003122770.1 256422117 8359265 complement(3819590..3820651) 1 NC_013132.1 KEGG: mmr:Mmar10_0295 oxidoreductase; oxidoreductase 3820651 8359265 Cpin_3100 Chitinophaga pinensis DSM 2588 oxidoreductase YP_003122770.1 3819590 R 485918 CDS YP_003122771.1 256422118 8359266 3820807..3823920 1 NC_013132.1 PFAM: two component regulator three Y domain protein; histidine kinase dimerisation and phosphoacceptor region; two component regulator propeller; ATP-binding region ATPase domain protein; KEGG: cps:CPS_2607 GGDEF domain-containing protein; histidine kinase 3823920 8359266 Cpin_3101 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122771.1 3820807 D 485918 CDS YP_003122772.1 256422119 8359267 3823993..3824661 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: aba:Acid345_4290 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 3824661 8359267 Cpin_3102 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003122772.1 3823993 D 485918 CDS YP_003122773.1 256422120 8359268 complement(3824748..3824870) 1 NC_013132.1 hypothetical protein 3824870 8359268 Cpin_3103 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122773.1 3824748 R 485918 CDS YP_003122774.1 256422121 8359269 complement(3824902..3825057) 1 NC_013132.1 hypothetical protein 3825057 8359269 Cpin_3104 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122774.1 3824902 R 485918 CDS YP_003122775.1 256422122 8359270 3825494..3827416 1 NC_013132.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 3827416 8359270 Cpin_3105 Chitinophaga pinensis DSM 2588 DNA topoisomerase IV subunit B YP_003122775.1 3825494 D 485918 CDS YP_003122776.1 256422123 8359271 3827437..3828306 1 NC_013132.1 PFAM: Domain of unknown function DUF1835; KEGG: bat:BAS2610 hypothetical protein; hypothetical protein 3828306 8359271 Cpin_3106 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122776.1 3827437 D 485918 CDS YP_003122777.1 256422124 8359272 3828317..3828715 1 NC_013132.1 hypothetical protein 3828715 8359272 Cpin_3107 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122777.1 3828317 D 485918 CDS YP_003122778.1 256422125 8359273 3828720..3831260 1 NC_013132.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 3831260 8359273 Cpin_3108 Chitinophaga pinensis DSM 2588 DNA topoisomerase IV subunit A YP_003122778.1 3828720 D 485918 CDS YP_003122779.1 256422126 8359274 3831223..3831423 1 NC_013132.1 hypothetical protein 3831423 8359274 Cpin_3109 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122779.1 3831223 D 485918 CDS YP_003122780.1 256422127 8359276 complement(3831621..3832604) 1 NC_013132.1 hypothetical protein 3832604 8359276 Cpin_3111 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122780.1 3831621 R 485918 CDS YP_003122781.1 256422128 8359277 complement(3832656..3833195) 1 NC_013132.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: aba:Acid345_3809 D-alpha,beta-D-heptose 1,7- bisphosphate phosphatase; histidinol-phosphate phosphatase family protein 3833195 8359277 Cpin_3112 Chitinophaga pinensis DSM 2588 histidinol-phosphate phosphatase family protein YP_003122781.1 3832656 R 485918 CDS YP_003122782.1 256422129 8359278 complement(3833214..3833909) 1 NC_013132.1 PFAM: Nucleotidyl transferase; KEGG: cje:Cj1423c D-glycero-D-manno- heptose 1-phosphate guanosyltransferase; nucleotidyltransferase 3833909 8359278 Cpin_3113 Chitinophaga pinensis DSM 2588 nucleotidyltransferase YP_003122782.1 3833214 R 485918 CDS YP_003122783.1 256422130 8359279 complement(3833906..3834481) 1 NC_013132.1 KEGG: tdn:Suden_0573 phosphoheptose isomerase; phosphoheptose isomerase 3834481 8359279 Cpin_3114 Chitinophaga pinensis DSM 2588 phosphoheptose isomerase YP_003122783.1 3833906 R 485918 CDS YP_003122784.1 256422131 8359280 complement(3834510..3835529) 1 NC_013132.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: net:Neut_0157 GHMP kinase; GHMP kinase 3835529 8359280 Cpin_3115 Chitinophaga pinensis DSM 2588 GHMP kinase YP_003122784.1 3834510 R 485918 CDS YP_003122785.1 256422132 8359281 complement(3835692..3836825) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: mch:Mchl_4250 glycosyl transferase group 1; group 1 glycosyl transferase 3836825 8359281 Cpin_3116 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003122785.1 3835692 R 485918 CDS YP_003122786.1 256422133 8359282 complement(3836832..3837779) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: scl:sce7385 undecaprenol glycosyltransferase; family 2 glycosyl transferase 3837779 8359282 Cpin_3117 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003122786.1 3836832 R 485918 CDS YP_003122787.1 256422134 8359283 complement(3837829..3838368) 1 NC_013132.1 KEGG: msl:Msil_3207 hypothetical protein; hypothetical protein 3838368 8359283 Cpin_3118 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122787.1 3837829 R 485918 CDS YP_003122788.1 256422135 8359284 complement(3838384..3839643) 1 NC_013132.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: gsu:GSU1272 dihydroorotase, multifunctional complex type; dihydroorotase, multifunctional complex type 3839643 8359284 Cpin_3119 Chitinophaga pinensis DSM 2588 dihydroorotase, multifunctional complex type YP_003122788.1 3838384 R 485918 CDS YP_003122789.1 256422136 8359285 3839972..3840163 1 NC_013132.1 hypothetical protein 3840163 8359285 Cpin_3120 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122789.1 3839972 D 485918 CDS YP_003122790.1 256422137 8359286 3840246..3840788 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; regulatory protein LuxR; KEGG: psb:Psyr_4731 RNA polymerase sigma factor; LuxR family transcriptional regulator 3840788 8359286 Cpin_3121 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003122790.1 3840246 D 485918 CDS YP_003122791.1 256422138 8359287 3840917..3841867 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 3841867 8359287 Cpin_3122 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122791.1 3840917 D 485918 CDS YP_003122792.1 256422139 8359288 3842071..3845490 1 NC_013132.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3845490 8359288 Cpin_3123 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122792.1 3842071 D 485918 CDS YP_003122793.1 256422140 8359289 3845512..3846978 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3846978 8359289 Cpin_3124 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122793.1 3845512 D 485918 CDS YP_003122794.1 256422141 8359290 3847052..3849238 1 NC_013132.1 PFAM: alpha-N-acetylglucosaminidase; KEGG: predicted protein; K01205 alpha-N- acetylglucosaminidase; alpha-N-acetylglucosaminidase 3849238 8359290 Cpin_3125 Chitinophaga pinensis DSM 2588 alpha-N-acetylglucosaminidase YP_003122794.1 3847052 D 485918 CDS YP_003122795.1 256422142 8359291 complement(3849295..3849663) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A3428 hypothetical protein; HxlR family transcriptional regulator 3849663 8359291 Cpin_3126 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122795.1 3849295 R 485918 CDS YP_003122796.1 256422143 8359292 3849773..3850717 1 NC_013132.1 PFAM: phospholipase/carboxylesterase; KEGG: pap:PSPA7_0646 hypothetical protein; phospholipase/carboxylesterase 3850717 8359292 Cpin_3127 Chitinophaga pinensis DSM 2588 phospholipase/carboxylesterase YP_003122796.1 3849773 D 485918 CDS YP_003122797.1 256422144 8359293 complement(3850723..3854418) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: scl:sce4866 integral membrane glycosyltransferase; family 2 glycosyl transferase 3854418 8359293 Cpin_3128 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003122797.1 3850723 R 485918 CDS YP_003122798.1 256422145 8359294 complement(3854462..3855769) 1 NC_013132.1 KEGG: xca:xccb100_3615 secreted protein; hypothetical protein 3855769 8359294 Cpin_3129 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122798.1 3854462 R 485918 CDS YP_003122799.1 256422146 8359295 3856104..3859652 1 NC_013132.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: sal:Sala_0294 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 3859652 8359295 Cpin_3130 Chitinophaga pinensis DSM 2588 glucose-methanol-choline oxidoreductase YP_003122799.1 3856104 D 485918 CDS YP_003122800.1 256422147 8359296 3859817..3860839 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bra:BRADO3944 oxidoreductase NAD(P)-binding subunit; short-chain dehydrogenase/reductase SDR 3860839 8359296 Cpin_3131 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122800.1 3859817 D 485918 CDS YP_003122801.1 256422148 8359297 complement(3861051..3862583) 1 NC_013132.1 PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_0101 PepSY-associated TM helix; PepSY-associated TM helix domain-containing protein 3862583 8359297 Cpin_3132 Chitinophaga pinensis DSM 2588 PepSY-associated TM helix domain-containing protein YP_003122801.1 3861051 R 485918 CDS YP_003122802.1 256422149 8359298 complement(3862619..3864949) 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: ppg:PputGB1_2303 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3864949 8359298 Cpin_3133 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003122802.1 3862619 R 485918 CDS YP_003122803.1 256422150 8359299 3865463..3866227 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: sus:Acid_0661 methyltransferase type 11; type 11 methyltransferase 3866227 8359299 Cpin_3134 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003122803.1 3865463 D 485918 CDS YP_003122804.1 256422151 8359300 complement(3866347..3867270) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 3867270 8359300 Cpin_3135 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122804.1 3866347 R 485918 CDS YP_003122805.1 256422152 8359301 complement(3867477..3868325) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3868325 8359301 Cpin_3136 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122805.1 3867477 R 485918 CDS YP_003122806.1 256422153 8359302 3868488..3869282 1 NC_013132.1 hypothetical protein 3869282 8359302 Cpin_3137 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122806.1 3868488 D 485918 CDS YP_003122807.1 256422154 8359303 complement(3869629..3869841) 1 NC_013132.1 hypothetical protein 3869841 8359303 Cpin_3138 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122807.1 3869629 R 485918 CDS YP_003122808.1 256422155 8359305 complement(3870691..3871440) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_2442 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3871440 8359305 Cpin_3140 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122808.1 3870691 R 485918 CDS YP_003122809.1 256422156 8359306 complement(3871555..3872370) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cju:C8J_0979 transcriptional regulatory protein; AraC family transcriptional regulator 3872370 8359306 Cpin_3141 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122809.1 3871555 R 485918 CDS YP_003122810.1 256422157 8359307 complement(3872385..3873308) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: similar to short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3873308 8359307 Cpin_3142 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122810.1 3872385 R 485918 CDS YP_003122811.1 256422158 8359308 complement(3873422..3874507) 1 NC_013132.1 PFAM: two component regulator propeller; KEGG: dol:Dole_0790 two component regulator propeller domain-containing protein; two component regulator propeller domain-containing protein 3874507 8359308 Cpin_3143 Chitinophaga pinensis DSM 2588 two component regulator propeller domain-containing protein YP_003122811.1 3873422 R 485918 CDS YP_003122812.1 256422159 8359309 3874752..3875705 1 NC_013132.1 PFAM: transcriptional regulator domain protein; KEGG: rsq:Rsph17025_2788 two component transcriptional regulator; winged helix family two component transcriptional regulator 3875705 8359309 Cpin_3144 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003122812.1 3874752 D 485918 CDS YP_003122813.1 256422160 8359310 3876636..3877448 1 NC_013132.1 KEGG: mes:Meso_4410 competence protein; competence protein 3877448 8359310 Cpin_3145 Chitinophaga pinensis DSM 2588 competence protein YP_003122813.1 3876636 D 485918 CDS YP_003122814.1 256422161 8359311 complement(3877512..3878588) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: smt:Smal_1191 metallophosphoesterase; metallophosphoesterase 3878588 8359311 Cpin_3146 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003122814.1 3877512 R 485918 CDS YP_003122815.1 256422162 8359312 complement(3878619..3880067) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 3880067 8359312 Cpin_3147 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122815.1 3878619 R 485918 CDS YP_003122816.1 256422163 8359313 complement(3880078..3883437) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 3883437 8359313 Cpin_3148 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003122816.1 3880078 R 485918 CDS YP_003122817.1 256422164 8359314 3883624..3885138 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bsu:BSU18010 hypothetical protein; alkyl hydroperoxide reductase 3885138 8359314 Cpin_3149 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122817.1 3883624 D 485918 CDS YP_003122818.1 256422165 8359315 3885299..3885532 1 NC_013132.1 hypothetical protein 3885532 8359315 Cpin_3150 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122818.1 3885299 D 485918 CDS YP_003122819.1 256422166 8359316 3885606..3886796 1 NC_013132.1 hypothetical protein 3886796 8359316 Cpin_3151 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122819.1 3885606 D 485918 CDS YP_003122820.1 256422167 8359317 3886808..3887341 1 NC_013132.1 hypothetical protein 3887341 8359317 Cpin_3152 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122820.1 3886808 D 485918 CDS YP_003122821.1 256422168 8359318 complement(3887374..3888177) 1 NC_013132.1 hypothetical protein 3888177 8359318 Cpin_3153 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122821.1 3887374 R 485918 CDS YP_003122822.1 256422169 8359319 complement(3888256..3890397) 1 NC_013132.1 PFAM: lanthionine synthetase C family protein; tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: hypothetical protein; serine/threonine protein kinase 3890397 8359319 Cpin_3154 Chitinophaga pinensis DSM 2588 serine/threonine protein kinase YP_003122822.1 3888256 R 485918 CDS YP_003122823.1 256422170 8359320 complement(3890403..3890666) 1 NC_013132.1 hypothetical protein 3890666 8359320 Cpin_3155 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122823.1 3890403 R 485918 CDS YP_003122824.1 256422171 8359321 complement(3890978..3891961) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vpa:VP1699 transcriptional regulator ExsA; AraC family transcriptional regulator 3891961 8359321 Cpin_3156 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122824.1 3890978 R 485918 CDS YP_003122825.1 256422172 8359322 complement(3892426..3892848) 1 NC_013132.1 hypothetical protein 3892848 8359322 Cpin_3157 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122825.1 3892426 R 485918 CDS YP_003122826.1 256422173 8359323 3892955..3894106 1 NC_013132.1 PFAM: FecR protein; KEGG: pmr:PMI3707 FecR-like transcriptional regulator; anti-FecI sigma factor FecR 3894106 8359323 Cpin_3158 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122826.1 3892955 D 485918 CDS YP_003122827.1 256422174 8359324 3894230..3894916 1 NC_013132.1 PFAM: rhomboid family protein; KEGG: shw:Sputw3181_3263 rhomboid family protein; rhomboid family protein 3894916 8359324 Cpin_3159 Chitinophaga pinensis DSM 2588 rhomboid family protein YP_003122827.1 3894230 D 485918 CDS YP_003122828.1 256422175 8359325 complement(3894964..3896088) 1 NC_013132.1 PFAM: FecR protein; KEGG: pap:PSPA7_2872 transmembrane sensor; anti-FecI sigma factor FecR 3896088 8359325 Cpin_3160 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122828.1 3894964 R 485918 CDS YP_003122829.1 256422176 8359326 complement(3896150..3896692) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sus:Acid_7860 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 3896692 8359326 Cpin_3161 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122829.1 3896150 R 485918 CDS YP_003122830.1 256422177 8359327 3896930..3897058 1 NC_013132.1 hypothetical protein 3897058 8359327 Cpin_3162 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122830.1 3896930 D 485918 CDS YP_003122831.1 256422178 8359328 3897162..3898535 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sde:Sde_2982 hypothetical protein; alkyl hydroperoxide reductase 3898535 8359328 Cpin_3163 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003122831.1 3897162 D 485918 CDS YP_003122832.1 256422179 8359329 3898600..3901881 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3901881 8359329 Cpin_3164 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122832.1 3898600 D 485918 CDS YP_003122833.1 256422180 8359330 3901892..3903262 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 3903262 8359330 Cpin_3165 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122833.1 3901892 D 485918 CDS YP_003122834.1 256422181 8359331 complement(3903366..3904394) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3904394 8359331 Cpin_3166 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122834.1 3903366 R 485918 CDS YP_003122835.1 256422182 8359332 complement(3904444..3904638) 1 NC_013132.1 hypothetical protein 3904638 8359332 Cpin_3167 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122835.1 3904444 R 485918 CDS YP_003122836.1 256422183 8359333 complement(3904764..3904967) 1 NC_013132.1 hypothetical protein 3904967 8359333 Cpin_3168 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122836.1 3904764 R 485918 CDS YP_003122837.1 256422184 8359334 complement(3904993..3905436) 1 NC_013132.1 KEGG: dps:DP1016 methylamine utilization protein; hypothetical protein 3905436 8359334 Cpin_3169 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122837.1 3904993 R 485918 CDS YP_003122838.1 256422185 8359335 complement(3905802..3906800) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rpb:RPB_0210 AraC family transcriptional regulator; AraC family transcriptional regulator 3906800 8359335 Cpin_3170 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122838.1 3905802 R 485918 CDS YP_003122839.1 256422186 8359336 3906937..3907059 1 NC_013132.1 hypothetical protein 3907059 8359336 Cpin_3171 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122839.1 3906937 D 485918 CDS YP_003122840.1 256422187 8359337 3907043..3907300 1 NC_013132.1 hypothetical protein 3907300 8359337 Cpin_3172 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122840.1 3907043 D 485918 CDS YP_003122841.1 256422188 8359338 3907418..3909238 1 NC_013132.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: met:M446_1526 multi-sensor hybrid histidine kinase; histidine kinase 3909238 8359338 Cpin_3173 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122841.1 3907418 D 485918 CDS YP_003122842.1 256422189 8359339 3909338..3910267 1 NC_013132.1 PFAM: UbiA prenyltransferase; KEGG: hypothetical protein; UbiA prenyltransferase 3910267 8359339 Cpin_3174 Chitinophaga pinensis DSM 2588 UbiA prenyltransferase YP_003122842.1 3909338 D 485918 CDS YP_003122843.1 256422190 8359340 3910345..3910701 1 NC_013132.1 hypothetical protein 3910701 8359340 Cpin_3175 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122843.1 3910345 D 485918 CDS YP_003122844.1 256422191 8359341 complement(3910996..3911784) 1 NC_013132.1 hypothetical protein 3911784 8359341 Cpin_3176 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122844.1 3910996 R 485918 CDS YP_003122845.1 256422192 8359342 complement(3911814..3912668) 1 NC_013132.1 hypothetical protein 3912668 8359342 Cpin_3177 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122845.1 3911814 R 485918 CDS YP_003122846.1 256422193 8359343 complement(3912777..3913265) 1 NC_013132.1 hypothetical protein 3913265 8359343 Cpin_3178 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122846.1 3912777 R 485918 CDS YP_003122847.1 256422194 8359344 complement(3913268..3913744) 1 NC_013132.1 hypothetical protein 3913744 8359344 Cpin_3179 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122847.1 3913268 R 485918 CDS YP_003122848.1 256422195 8359345 complement(3913851..3914216) 1 NC_013132.1 hypothetical protein 3914216 8359345 Cpin_3180 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122848.1 3913851 R 485918 CDS YP_003122849.1 256422196 8359346 complement(3914356..3914757) 1 NC_013132.1 hypothetical protein 3914757 8359346 Cpin_3181 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122849.1 3914356 R 485918 CDS YP_003122850.1 256422197 8359347 complement(3914878..3915591) 1 NC_013132.1 hypothetical protein 3915591 8359347 Cpin_3182 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122850.1 3914878 R 485918 CDS YP_003122851.1 256422198 8359348 complement(3915558..3916361) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3916361 8359348 Cpin_3183 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122851.1 3915558 R 485918 CDS YP_003122852.1 256422199 8359349 complement(3917030..3917617) 1 NC_013132.1 hypothetical protein 3917617 8359349 Cpin_3184 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122852.1 3917030 R 485918 CDS YP_003122853.1 256422200 8359350 complement(3917634..3924890) 1 NC_013132.1 KEGG: mno:Mnod_2545 hypothetical protein; hypothetical protein 3924890 8359350 Cpin_3185 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122853.1 3917634 R 485918 CDS YP_003122854.1 256422201 8359351 complement(3924910..3928149) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3928149 8359351 Cpin_3186 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122854.1 3924910 R 485918 CDS YP_003122855.1 256422202 8359352 complement(3928190..3929320) 1 NC_013132.1 hypothetical protein 3929320 8359352 Cpin_3187 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122855.1 3928190 R 485918 CDS YP_003122856.1 256422203 8359353 complement(3929361..3930764) 1 NC_013132.1 KEGG: Viral A-type inclusion protein repeat containing protein; hypothetical protein 3930764 8359353 Cpin_3188 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122856.1 3929361 R 485918 CDS YP_003122857.1 256422204 8359354 3931188..3931508 1 NC_013132.1 hypothetical protein 3931508 8359354 Cpin_3189 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122857.1 3931188 D 485918 CDS YP_003122858.1 256422205 8359355 3931941..3933188 1 NC_013132.1 KEGG: mno:Mnod_7498 pentapeptide repeat protein; hypothetical protein 3933188 8359355 Cpin_3190 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122858.1 3931941 D 485918 CDS YP_003122859.1 256422206 8359356 complement(3933364..3934764) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 3934764 8359356 Cpin_3191 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122859.1 3933364 R 485918 CDS YP_003122860.1 256422207 8359357 complement(3934946..3936793) 1 NC_013132.1 PFAM: UvrD/REP helicase; KEGG: reh:PHG167 helicase, superfamily I; UvrD/REP helicase 3936793 8359357 Cpin_3192 Chitinophaga pinensis DSM 2588 UvrD/REP helicase YP_003122860.1 3934946 R 485918 CDS YP_003122861.1 256422208 8359358 complement(3936774..3938798) 1 NC_013132.1 KEGG: pmr:PMI2435 plasmid-related protein; hypothetical protein 3938798 8359358 Cpin_3193 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122861.1 3936774 R 485918 CDS YP_003122862.1 256422209 8359359 complement(3938954..3941671) 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein; glycoside hydrolase 3941671 8359359 Cpin_3194 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122862.1 3938954 R 485918 CDS YP_003122863.1 256422210 8359360 complement(3941735..3943153) 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 3943153 8359360 Cpin_3195 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122863.1 3941735 R 485918 CDS YP_003122864.1 256422211 8359361 complement(3943164..3946463) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3946463 8359361 Cpin_3196 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122864.1 3943164 R 485918 CDS YP_003122865.1 256422212 8359362 3946925..3947476 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 3947476 8359362 Cpin_3197 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122865.1 3946925 D 485918 CDS YP_003122866.1 256422213 8359363 3947521..3948663 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family; anti-FecI sigma factor FecR 3948663 8359363 Cpin_3198 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122866.1 3947521 D 485918 CDS YP_003122867.1 256422214 8359364 complement(3948671..3949012) 1 NC_013132.1 KEGG: hypothetical protein LOC100025200; hypothetical protein 3949012 8359364 Cpin_3199 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122867.1 3948671 R 485918 CDS YP_003122868.1 256422215 8359365 3949293..3951878 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 3951878 8359365 Cpin_3200 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003122868.1 3949293 D 485918 CDS YP_003122869.1 256422216 8359366 complement(3951905..3952255) 1 NC_013132.1 KEGG: hypothetical protein LOC691250; hypothetical protein 3952255 8359366 Cpin_3201 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122869.1 3951905 R 485918 CDS YP_003122870.1 256422217 8359367 complement(3952284..3952634) 1 NC_013132.1 hypothetical protein 3952634 8359367 Cpin_3202 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122870.1 3952284 R 485918 CDS YP_003122871.1 256422218 8359368 complement(3952724..3953074) 1 NC_013132.1 KEGG: hypothetical protein LOC690964; hypothetical protein 3953074 8359368 Cpin_3203 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122871.1 3952724 R 485918 CDS YP_003122872.1 256422219 8359369 complement(3953864..3954979) 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN0275 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 3954979 8359369 Cpin_3204 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122872.1 3953864 R 485918 CDS YP_003122873.1 256422220 8359370 complement(3955033..3955569) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: aba:Acid345_0545 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 3955569 8359370 Cpin_3205 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122873.1 3955033 R 485918 CDS YP_003122874.1 256422221 8359371 3955928..3959242 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3959242 8359371 Cpin_3206 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122874.1 3955928 D 485918 CDS YP_003122875.1 256422222 8359372 3959258..3960646 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 3960646 8359372 Cpin_3207 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122875.1 3959258 D 485918 CDS YP_003122876.1 256422223 8359373 complement(3960665..3960910) 1 NC_013132.1 hypothetical protein 3960910 8359373 Cpin_3208 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122876.1 3960665 R 485918 CDS YP_003122877.1 256422224 8359374 complement(3961119..3961760) 1 NC_013132.1 hypothetical protein 3961760 8359374 Cpin_3209 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122877.1 3961119 R 485918 CDS YP_003122878.1 256422225 8359375 complement(3961826..3962464) 1 NC_013132.1 hypothetical protein 3962464 8359375 Cpin_3210 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122878.1 3961826 R 485918 CDS YP_003122879.1 256422226 8359376 complement(3962734..3963333) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: sde:Sde_1442 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit 3963333 8359376 Cpin_3211 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122879.1 3962734 R 485918 CDS YP_003122880.1 256422227 8359377 complement(3963480..3964076) 1 NC_013132.1 hypothetical protein 3964076 8359377 Cpin_3212 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122880.1 3963480 R 485918 CDS YP_003122881.1 256422228 8359378 complement(3964141..3965673) 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 3965673 8359378 Cpin_3213 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003122881.1 3964141 R 485918 CDS YP_003122882.1 256422229 8359379 complement(3965741..3969076) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 3969076 8359379 Cpin_3214 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122882.1 3965741 R 485918 CDS YP_003122883.1 256422230 8359380 3969735..3970025 1 NC_013132.1 KEGG: GJ16154 gene product from transcript GJ16154- RA; hypothetical protein 3970025 8359380 Cpin_3215 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122883.1 3969735 D 485918 CDS YP_003122884.1 256422231 8359381 3970137..3970430 1 NC_013132.1 KEGG: GJ16154 gene product from transcript GJ16154- RA; hypothetical protein 3970430 8359381 Cpin_3216 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122884.1 3970137 D 485918 CDS YP_003122885.1 256422232 8359382 3970531..3970824 1 NC_013132.1 KEGG: hypothetical protein LOC685035; hypothetical protein 3970824 8359382 Cpin_3217 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122885.1 3970531 D 485918 CDS YP_003122886.1 256422233 8359383 complement(3970866..3973334) 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 3973334 8359383 Cpin_3218 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003122886.1 3970866 R 485918 CDS YP_003122887.1 256422234 8359384 3973721..3974665 1 NC_013132.1 KEGG: conserved hypothetical protein; hypothetical protein 3974665 8359384 Cpin_3219 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122887.1 3973721 D 485918 CDS YP_003122888.1 256422235 8359385 complement(3974681..3975838) 1 NC_013132.1 PFAM: FecR protein; KEGG: sde:Sde_1443 transcriptional regulator; anti-FecI sigma factor FecR 3975838 8359385 Cpin_3220 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122888.1 3974681 R 485918 CDS YP_003122889.1 256422236 8359386 complement(3975879..3976442) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sigK; sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 3976442 8359386 Cpin_3221 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122889.1 3975879 R 485918 CDS YP_003122890.1 256422237 8359387 3976665..3977378 1 NC_013132.1 hypothetical protein 3977378 8359387 Cpin_3222 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122890.1 3976665 D 485918 CDS YP_003122891.1 256422238 8359388 3977420..3978916 1 NC_013132.1 KEGG: pna:Pnap_0002 hypothetical protein; hypothetical protein 3978916 8359388 Cpin_3223 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122891.1 3977420 D 485918 CDS YP_003122892.1 256422239 8359389 complement(3978928..3979689) 1 NC_013132.1 hypothetical protein 3979689 8359389 Cpin_3224 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122892.1 3978928 R 485918 CDS YP_003122893.1 256422240 8359390 complement(3979726..3981474) 1 NC_013132.1 KEGG: lpf:lpl1015 hypothetical protein; hypothetical protein 3981474 8359390 Cpin_3225 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122893.1 3979726 R 485918 CDS YP_003122894.1 256422241 8359391 3982070..3982606 1 NC_013132.1 KEGG: afe:Lferr_1304 domain of unknown function DUF1738; hypothetical protein 3982606 8359391 Cpin_3226 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122894.1 3982070 D 485918 CDS YP_003122895.1 256422242 8359392 3982661..3983014 1 NC_013132.1 hypothetical protein 3983014 8359392 Cpin_3227 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122895.1 3982661 D 485918 CDS YP_003122896.1 256422243 8359393 3982999..3983271 1 NC_013132.1 hypothetical protein 3983271 8359393 Cpin_3228 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122896.1 3982999 D 485918 CDS YP_003122897.1 256422244 8359394 3983278..3983922 1 NC_013132.1 KEGG: eci:UTI89_C1147 hypothetical protein; hypothetical protein 3983922 8359394 Cpin_3229 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122897.1 3983278 D 485918 CDS YP_003122898.1 256422245 8359395 3983930..3984466 1 NC_013132.1 hypothetical protein 3984466 8359395 Cpin_3230 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122898.1 3983930 D 485918 CDS YP_003122899.1 256422246 8359396 3984478..3984705 1 NC_013132.1 hypothetical protein 3984705 8359396 Cpin_3231 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122899.1 3984478 D 485918 CDS YP_003122900.1 256422247 8359397 3984758..3985840 1 NC_013132.1 hypothetical protein 3985840 8359397 Cpin_3232 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122900.1 3984758 D 485918 CDS YP_003122901.1 256422248 8359398 3985837..3986571 1 NC_013132.1 KEGG: pol:Bpro_5066 hypothetical protein; hypothetical protein 3986571 8359398 Cpin_3233 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122901.1 3985837 D 485918 CDS YP_003122902.1 256422249 8359399 3986568..3987368 1 NC_013132.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bac:BamMC406_6523 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 3987368 8359399 Cpin_3234 Chitinophaga pinensis DSM 2588 UBA/THIF-type NAD/FAD binding protein YP_003122902.1 3986568 D 485918 CDS YP_003122903.1 256422250 8359400 3987766..3988908 1 NC_013132.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sus:Acid_0850 DNA-directed DNA polymerase; DNA-directed DNA polymerase 3988908 8359400 Cpin_3235 Chitinophaga pinensis DSM 2588 DNA-directed DNA polymerase YP_003122903.1 3987766 D 485918 CDS YP_003122904.1 256422251 8359401 3988918..3991860 1 NC_013132.1 KEGG: pca:Pcar_1741 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; DNA polymerase III subunit alpha 3991860 8359401 Cpin_3236 Chitinophaga pinensis DSM 2588 DNA polymerase III subunit alpha YP_003122904.1 3988918 D 485918 CDS YP_003122905.1 256422252 8359402 3992082..3992348 1 NC_013132.1 hypothetical protein 3992348 8359402 Cpin_3237 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122905.1 3992082 D 485918 CDS YP_003122906.1 256422253 8359403 3992345..3992650 1 NC_013132.1 KEGG: ppg:PputGB1_1623 hypothetical protein; hypothetical protein 3992650 8359403 Cpin_3238 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122906.1 3992345 D 485918 CDS YP_003122907.1 256422254 8359404 complement(3992645..3992884) 1 NC_013132.1 hypothetical protein 3992884 8359404 Cpin_3239 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122907.1 3992645 R 485918 CDS YP_003122908.1 256422255 8359405 complement(3992887..3993075) 1 NC_013132.1 KEGG: nwi:Nwi_0998 hypothetical protein; hypothetical protein 3993075 8359405 Cpin_3240 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122908.1 3992887 R 485918 CDS YP_003122909.1 256422256 8359406 3993180..3993461 1 NC_013132.1 hypothetical protein 3993461 8359406 Cpin_3241 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122909.1 3993180 D 485918 CDS YP_003122910.1 256422257 8359407 3993510..3995483 1 NC_013132.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; KEGG: DNA ligase D; K01971 DNA ligase (ATP); DNA ligase D 3995483 8359407 Cpin_3242 Chitinophaga pinensis DSM 2588 DNA ligase D YP_003122910.1 3993510 D 485918 CDS YP_003122911.1 256422258 8359408 3995605..3996705 1 NC_013132.1 hypothetical protein 3996705 8359408 Cpin_3243 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122911.1 3995605 D 485918 CDS YP_003122912.1 256422259 8359409 complement(3996727..3997248) 1 NC_013132.1 hypothetical protein 3997248 8359409 Cpin_3244 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122912.1 3996727 R 485918 CDS YP_003122913.1 256422260 8359410 3997407..3997715 1 NC_013132.1 hypothetical protein 3997715 8359410 Cpin_3245 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122913.1 3997407 D 485918 CDS YP_003122914.1 256422261 8359411 complement(3997818..3998153) 1 NC_013132.1 hypothetical protein 3998153 8359411 Cpin_3246 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122914.1 3997818 R 485918 CDS YP_003122915.1 256422262 8359412 complement(3998125..3998367) 1 NC_013132.1 hypothetical protein 3998367 8359412 Cpin_3247 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122915.1 3998125 R 485918 CDS YP_003122916.1 256422263 8359413 complement(3998505..3999818) 1 NC_013132.1 PFAM: integrase family protein; KEGG: seh:SeHA_C1600 phage integrase family protein; integrase family protein 3999818 8359413 Cpin_3248 Chitinophaga pinensis DSM 2588 integrase family protein YP_003122916.1 3998505 R 485918 CDS YP_003122917.1 256422264 8359415 4000820..4002145 1 NC_013132.1 hypothetical protein 4002145 8359415 Cpin_3249 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122917.1 4000820 D 485918 CDS YP_003122918.1 256422265 8359416 complement(4002217..4004277) 1 NC_013132.1 PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; KEGG: ccs:CCNA_00579 endonuclease; DNA/RNA non-specific endonuclease 4004277 8359416 Cpin_3250 Chitinophaga pinensis DSM 2588 DNA/RNA non-specific endonuclease YP_003122918.1 4002217 R 485918 CDS YP_003122919.1 256422266 8359417 complement(4004506..4005051) 1 NC_013132.1 KEGG: bur:Bcep18194_B1124 hypothetical protein; hypothetical protein 4005051 8359417 Cpin_3251 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122919.1 4004506 R 485918 CDS YP_003122920.1 256422267 8359418 4005186..4006322 1 NC_013132.1 KEGG: sew:SeSA_A4040 outer membrane protein; outer membrane protein 4006322 8359418 Cpin_3252 Chitinophaga pinensis DSM 2588 outer membrane protein YP_003122920.1 4005186 D 485918 CDS YP_003122921.1 256422268 8359419 complement(4006326..4006778) 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: smd:Smed_5848 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 4006778 8359419 Cpin_3253 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003122921.1 4006326 R 485918 CDS YP_003122922.1 256422269 8359420 4006906..4007493 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: glo:Glov_3436 transcriptional regulator, TetR family; TetR family transcriptional regulator 4007493 8359420 Cpin_3254 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003122922.1 4006906 D 485918 CDS YP_003122923.1 256422270 8359421 4007547..4007921 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcb:BCB4264_A2986 glyoxalase family protein; bleomycin resistance protein 4007921 8359421 Cpin_3255 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003122923.1 4007547 D 485918 CDS YP_003122924.1 256422271 8359422 4008042..4009187 1 NC_013132.1 KEGG: pat:Patl_3535 hypothetical protein; hypothetical protein 4009187 8359422 Cpin_3256 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122924.1 4008042 D 485918 CDS YP_003122925.1 256422272 8359423 4009544..4009957 1 NC_013132.1 PFAM: protein of unknown function DUF1200; KEGG: bcr:BCAH187_A1389 lipoprotein; hypothetical protein 4009957 8359423 Cpin_3257 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122925.1 4009544 D 485918 CDS YP_003122926.1 256422273 8359424 complement(4009958..4012510) 1 NC_013132.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: cps:CPS_2411 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 4012510 8359424 Cpin_3258 Chitinophaga pinensis DSM 2588 Sel1 domain-containing protein repeat-containing protein YP_003122926.1 4009958 R 485918 CDS YP_003122927.1 256422274 8359425 4012700..4013230 1 NC_013132.1 hypothetical protein 4013230 8359425 Cpin_3259 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122927.1 4012700 D 485918 CDS YP_003122928.1 256422275 8359426 complement(4013303..4013881) 1 NC_013132.1 KEGG: nmc:NMC0604 hypothetical protein; hypothetical protein 4013881 8359426 Cpin_3260 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122928.1 4013303 R 485918 CDS YP_003122929.1 256422276 8359427 4013969..4014661 1 NC_013132.1 hypothetical protein 4014661 8359427 Cpin_3261 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122929.1 4013969 D 485918 CDS YP_003122930.1 256422277 8359428 4014712..4017915 1 NC_013132.1 KEGG: xop:PXO_01318 TonB-dependent outer membrane receptor/Oar-like protein; hypothetical protein 4017915 8359428 Cpin_3262 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122930.1 4014712 D 485918 CDS YP_003122931.1 256422278 8359429 complement(4017994..4018506) 1 NC_013132.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: afw:Anae109_1121 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 4018506 8359429 Cpin_3263 Chitinophaga pinensis DSM 2588 outer membrane chaperone Skp YP_003122931.1 4017994 R 485918 CDS YP_003122932.1 256422279 8359430 complement(4018677..4020092) 1 NC_013132.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rec:RHECIAT_PC0000502 probable alpha-L- fucosidase protein; alpha-L-fucosidase 4020092 8359430 Cpin_3264 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003122932.1 4018677 R 485918 CDS YP_003122933.1 256422280 8359431 complement(4020224..4020799) 1 NC_013132.1 PFAM: YceI family protein; hypothetical protein 4020799 8359431 Cpin_3265 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122933.1 4020224 R 485918 CDS YP_003122934.1 256422281 8359432 4020977..4022293 1 NC_013132.1 KEGG: pcr:Pcryo_1258 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 4022293 8359432 Cpin_3266 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003122934.1 4020977 D 485918 CDS YP_003122935.1 256422282 8359433 complement(4022351..4023850) 1 NC_013132.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein; peptidase S8/S53 subtilisin kexin sedolisin 4023850 8359433 Cpin_3267 Chitinophaga pinensis DSM 2588 peptidase S8/S53 subtilisin kexin sedolisin YP_003122935.1 4022351 R 485918 CDS YP_003122936.1 256422283 8359434 4024330..4025223 1 NC_013132.1 PFAM: PfkB domain protein; KEGG: afw:Anae109_2948 ribokinase-like domain- containing protein; PfkB domain-containing protein 4025223 8359434 Cpin_3268 Chitinophaga pinensis DSM 2588 PfkB domain-containing protein YP_003122936.1 4024330 D 485918 CDS YP_003122937.1 256422284 8359435 4025325..4026848 1 NC_013132.1 PFAM: glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: bsu:BSU27030 levanase; glycoside hydrolase 4026848 8359435 Cpin_3269 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122937.1 4025325 D 485918 CDS YP_003122938.1 256422285 8359436 complement(4027110..4028021) 1 NC_013132.1 PFAM: glycosyl transferase family 8; KEGG: aha:AHA_4170 glycosyl transferase family protein; glycosyl transferase family protein 4028021 8359436 Cpin_3270 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003122938.1 4027110 R 485918 CDS YP_003122939.1 256422286 8359437 4028304..4030691 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 4030691 8359437 Cpin_3271 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122939.1 4028304 D 485918 CDS YP_003122940.1 256422287 8359438 complement(4030759..4034046) 1 NC_013132.1 PFAM: NHL repeat containing protein; KEGG: hypothetical protein; NHL repeat containing protein 4034046 8359438 Cpin_3272 Chitinophaga pinensis DSM 2588 NHL repeat containing protein YP_003122940.1 4030759 R 485918 CDS YP_003122941.1 256422288 8359439 complement(4034214..4034606) 1 NC_013132.1 KEGG: bba:Bd2515 sec-independent protein translocase protein TatC; sec-independent protein translocase protein TatC 4034606 8359439 Cpin_3273 Chitinophaga pinensis DSM 2588 sec-independent protein translocase protein TatC YP_003122941.1 4034214 R 485918 CDS YP_003122942.1 256422289 8359440 complement(4034722..4035126) 1 NC_013132.1 hypothetical protein 4035126 8359440 Cpin_3274 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122942.1 4034722 R 485918 CDS YP_003122943.1 256422290 8359441 4035202..4035789 1 NC_013132.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; KEGG: sfu:Sfum_3445 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 4035789 8359441 Cpin_3275 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003122943.1 4035202 D 485918 CDS YP_003122944.1 256422291 8359442 complement(4035855..4036676) 1 NC_013132.1 hypothetical protein 4036676 8359442 Cpin_3276 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122944.1 4035855 R 485918 CDS YP_003122945.1 256422292 8359443 complement(4036673..4037494) 1 NC_013132.1 PFAM: esterase; KEGG: sml:Smlt3697 ferric-enterobactin hydrolase; esterase 4037494 8359443 Cpin_3277 Chitinophaga pinensis DSM 2588 esterase YP_003122945.1 4036673 R 485918 CDS YP_003122946.1 256422293 8359444 4037682..4037813 1 NC_013132.1 hypothetical protein 4037813 8359444 Cpin_3278 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122946.1 4037682 D 485918 CDS YP_003122947.1 256422294 8359445 4037901..4039124 1 NC_013132.1 KEGG: kpe:KPK_0007 outer membrane protein, OMP85 family; hypothetical protein 4039124 8359445 Cpin_3279 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122947.1 4037901 D 485918 CDS YP_003122948.1 256422295 8359446 4039181..4039885 1 NC_013132.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 4039885 8359446 Cpin_3280 Chitinophaga pinensis DSM 2588 peptidase E YP_003122948.1 4039181 D 485918 CDS YP_003122949.1 256422296 8359447 complement(4040023..4040661) 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rde:RD1_1136 hypothetical protein; NAD-dependent epimerase/dehydratase 4040661 8359447 Cpin_3281 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003122949.1 4040023 R 485918 CDS YP_003122950.1 256422297 8359448 complement(4040732..4041547) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1303 hypothetical protein; AraC family transcriptional regulator 4041547 8359448 Cpin_3282 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122950.1 4040732 R 485918 CDS YP_003122951.1 256422298 8359449 4041666..4042028 1 NC_013132.1 hypothetical protein 4042028 8359449 Cpin_3283 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122951.1 4041666 D 485918 CDS YP_003122952.1 256422299 8359450 4042173..4043570 1 NC_013132.1 PFAM: methyltransferase type 12; KEGG: aba:Acid345_1976 methyltransferase type 12; type 12 methyltransferase 4043570 8359450 Cpin_3284 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003122952.1 4042173 D 485918 CDS YP_003122953.1 256422300 8359451 4043703..4046246 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: aba:Acid345_1977 metallophosphoesterase; bis(5'-nucleosyl)-tetraphosphatase 4046246 8359451 Cpin_3285 Chitinophaga pinensis DSM 2588 bis(5'-nucleosyl)-tetraphosphatase YP_003122953.1 4043703 D 485918 CDS YP_003122954.1 256422301 8359452 4046443..4047015 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ppg:PputGB1_0699 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 4047015 8359452 Cpin_3286 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003122954.1 4046443 D 485918 CDS YP_003122955.1 256422302 8359453 4047078..4048232 1 NC_013132.1 PFAM: FecR protein; KEGG: psp:PSPPH_2117 FecR protein superfamily protein; anti-FecI sigma factor FecR 4048232 8359453 Cpin_3287 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003122955.1 4047078 D 485918 CDS YP_003122956.1 256422303 8359454 4048349..4051735 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 4051735 8359454 Cpin_3288 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003122956.1 4048349 D 485918 CDS YP_003122957.1 256422304 8359455 4051746..4053197 1 NC_013132.1 hypothetical protein 4053197 8359455 Cpin_3289 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122957.1 4051746 D 485918 CDS YP_003122958.1 256422305 8359456 4053220..4053972 1 NC_013132.1 hypothetical protein 4053972 8359456 Cpin_3290 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122958.1 4053220 D 485918 CDS YP_003122959.1 256422306 8359457 4054020..4055513 1 NC_013132.1 hypothetical protein 4055513 8359457 Cpin_3291 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122959.1 4054020 D 485918 CDS YP_003122960.1 256422307 8359458 4055526..4056887 1 NC_013132.1 PFAM: redoxin; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gbm:Gbem_3412 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin 4056887 8359458 Cpin_3292 Chitinophaga pinensis DSM 2588 redoxin YP_003122960.1 4055526 D 485918 CDS YP_003122961.1 256422308 8359459 complement(4057044..4058312) 1 NC_013132.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bra:BRADO2376 amine oxidase (flavin- containing); amine oxidase 4058312 8359459 Cpin_3293 Chitinophaga pinensis DSM 2588 amine oxidase YP_003122961.1 4057044 R 485918 CDS YP_003122962.1 256422309 8359460 complement(4058354..4058821) 1 NC_013132.1 hypothetical protein 4058821 8359460 Cpin_3294 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122962.1 4058354 R 485918 CDS YP_003122963.1 256422310 8359461 4059054..4059611 1 NC_013132.1 hypothetical protein 4059611 8359461 Cpin_3295 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122963.1 4059054 D 485918 CDS YP_003122964.1 256422311 8359462 4059850..4061232 1 NC_013132.1 PFAM: sulfatase; KEGG: swd:Swoo_3661 sulfatase; sulfatase 4061232 8359462 Cpin_3296 Chitinophaga pinensis DSM 2588 sulfatase YP_003122964.1 4059850 D 485918 CDS YP_003122965.1 256422312 8359463 4061241..4064066 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: sus:Acid_5957 glycoside hydrolase family protein; glycoside hydrolase 4064066 8359463 Cpin_3297 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003122965.1 4061241 D 485918 CDS YP_003122966.1 256422313 8359464 4064118..4065020 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 4065020 8359464 Cpin_3298 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122966.1 4064118 D 485918 CDS YP_003122967.1 256422314 8359465 4065101..4065940 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_0589 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4065940 8359465 Cpin_3299 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122967.1 4065101 D 485918 CDS YP_003122968.1 256422315 8359466 4065953..4066060 1 NC_013132.1 hypothetical protein 4066060 8359466 Cpin_3300 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122968.1 4065953 D 485918 CDS YP_003122969.1 256422316 8359467 complement(4066032..4066613) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: bcz:BCZK2985 TetR family transcriptional regulator; TetR family transcriptional regulator 4066613 8359467 Cpin_3301 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003122969.1 4066032 R 485918 CDS YP_003122970.1 256422317 8359468 4066904..4067722 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4067722 8359468 Cpin_3302 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122970.1 4066904 D 485918 CDS YP_003122971.1 256422318 8359469 4067773..4068441 1 NC_013132.1 hypothetical protein 4068441 8359469 Cpin_3303 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122971.1 4067773 D 485918 CDS YP_003122972.1 256422319 8359470 complement(4068410..4069078) 1 NC_013132.1 hypothetical protein 4069078 8359470 Cpin_3304 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122972.1 4068410 R 485918 CDS YP_003122973.1 256422320 8359471 complement(4069140..4069955) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator; AraC family transcriptional regulator 4069955 8359471 Cpin_3305 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003122973.1 4069140 R 485918 CDS YP_003122974.1 256422321 8359472 4070074..4070256 1 NC_013132.1 hypothetical protein 4070256 8359472 Cpin_3306 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122974.1 4070074 D 485918 CDS YP_003122975.1 256422322 8359473 4070331..4072088 1 NC_013132.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bsu:BSU08210 hypothetical protein; ABC transporter 4072088 8359473 Cpin_3307 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122975.1 4070331 D 485918 CDS YP_003122976.1 256422323 8359474 4072069..4073829 1 NC_013132.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bce:BC2372 multidrug ABC transporter permease/ATP-binding protein; ABC transporter 4073829 8359474 Cpin_3308 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122976.1 4072069 D 485918 CDS YP_003122977.1 256422324 8359475 complement(4074033..4074431) 1 NC_013132.1 PFAM: protein of unknown function DUF1634; KEGG: aba:Acid345_3911 protein of unknown function DUF1634; hypothetical protein 4074431 8359475 Cpin_3309 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122977.1 4074033 R 485918 CDS YP_003122978.1 256422325 8359476 complement(4074436..4075272) 1 NC_013132.1 PFAM: protein of unknown function DUF81; KEGG: aba:Acid345_3912 protein of unknown function DUF81; hypothetical protein 4075272 8359476 Cpin_3310 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122978.1 4074436 R 485918 CDS YP_003122979.1 256422326 8359477 complement(4075288..4075944) 1 NC_013132.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pau:PA14_43480 GntR family transcriptional regulator; GntR family transcriptional regulator 4075944 8359477 Cpin_3311 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003122979.1 4075288 R 485918 CDS YP_003122980.1 256422327 8359478 complement(4076360..4077286) 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: mxa:MXAN_6306 fatty acid desaturase family protein; stearoyl-CoA 9-desaturase 4077286 8359478 Cpin_3312 Chitinophaga pinensis DSM 2588 stearoyl-CoA 9-desaturase YP_003122980.1 4076360 R 485918 CDS YP_003122981.1 256422328 8359479 complement(4077347..4079041) 1 NC_013132.1 PFAM: protein of unknown function DUF477; KEGG: bpt:Bpet4154 hypothetical protein; hypothetical protein 4079041 8359479 Cpin_3313 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122981.1 4077347 R 485918 CDS YP_003122982.1 256422329 8359480 4079223..4079960 1 NC_013132.1 PFAM: protein of unknown function DUF140; KEGG: rce:RC1_1579 ABC transporter permease protein; hypothetical protein 4079960 8359480 Cpin_3314 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122982.1 4079223 D 485918 CDS YP_003122983.1 256422330 8359481 4079979..4080755 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd3806 ABC-type organic solvent resistance transport system ATP-binding protein; ABC transporter 4080755 8359481 Cpin_3315 Chitinophaga pinensis DSM 2588 ABC transporter YP_003122983.1 4079979 D 485918 CDS YP_003122984.1 256422331 8359482 4080762..4081562 1 NC_013132.1 PFAM: hypothetical protein; KEGG: aba:Acid345_4517 mammalian cell entry related; hypothetical protein 4081562 8359482 Cpin_3316 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122984.1 4080762 D 485918 CDS YP_003122985.1 256422332 8359483 4081655..4082671 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: pat:Patl_0797 alcohol dehydrogenase GroES- like protein; alcohol dehydrogenase GroES domain-containing protein 4082671 8359483 Cpin_3317 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003122985.1 4081655 D 485918 CDS YP_003122986.1 256422333 8359484 4082864..4083409 1 NC_013132.1 KEGG: mxa:MXAN_2499 hypothetical protein; hypothetical protein 4083409 8359484 Cpin_3318 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122986.1 4082864 D 485918 CDS YP_003122987.1 256422334 8359485 4083497..4083760 1 NC_013132.1 hypothetical protein 4083760 8359485 Cpin_3319 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122987.1 4083497 D 485918 CDS YP_003122988.1 256422335 8359486 4083793..4085355 1 NC_013132.1 PFAM: sulfatase; KEGG: sal:Sala_1013 sulfatase; sulfatase 4085355 8359486 Cpin_3320 Chitinophaga pinensis DSM 2588 sulfatase YP_003122988.1 4083793 D 485918 CDS YP_003122989.1 256422336 8359487 complement(4085593..4086927) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aeh:Mlg_1802 GAF sensor signal transduction histidine kinase; histidine kinase 4086927 8359487 Cpin_3321 Chitinophaga pinensis DSM 2588 histidine kinase YP_003122989.1 4085593 R 485918 CDS YP_003122990.1 256422337 8359488 4087095..4087352 1 NC_013132.1 hypothetical protein 4087352 8359488 Cpin_3322 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122990.1 4087095 D 485918 CDS YP_003122991.1 256422338 8359489 4087398..4088762 1 NC_013132.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B1396 acyl-CoA dehydrogenase; glutaryl-CoA dehydrogenase 4088762 8359489 Cpin_3323 Chitinophaga pinensis DSM 2588 glutaryl-CoA dehydrogenase YP_003122991.1 4087398 D 485918 CDS YP_003122992.1 256422339 8359490 complement(4088855..4089256) 1 NC_013132.1 hypothetical protein 4089256 8359490 Cpin_3324 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122992.1 4088855 R 485918 CDS YP_003122993.1 256422340 8359491 complement(4089273..4089809) 1 NC_013132.1 PFAM: YceI family protein; KEGG: rso:RSc2718 signal peptide protein; hypothetical protein 4089809 8359491 Cpin_3325 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122993.1 4089273 R 485918 CDS YP_003122994.1 256422341 8359492 complement(4089824..4090396) 1 NC_013132.1 PFAM: YceI family protein; KEGG: gme:Gmet_3449 YceI; hypothetical protein 4090396 8359492 Cpin_3326 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122994.1 4089824 R 485918 CDS YP_003122995.1 256422342 8359493 4090670..4091050 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_B1021 transcriptional regulator; HxlR family transcriptional regulator 4091050 8359493 Cpin_3327 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003122995.1 4090670 D 485918 CDS YP_003122996.1 256422343 8359494 4091488..4092297 1 NC_013132.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: predicted protein; phytanoyl-CoA dioxygenase 4092297 8359494 Cpin_3328 Chitinophaga pinensis DSM 2588 phytanoyl-CoA dioxygenase YP_003122996.1 4091488 D 485918 CDS YP_003122997.1 256422344 8359495 complement(4093083..4093853) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pae:PA0658 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4093853 8359495 Cpin_3329 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003122997.1 4093083 R 485918 CDS YP_003122998.1 256422345 8359496 complement(4094315..4094794) 1 NC_013132.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: tcx:Tcr_0170 hypothetical protein; hypothetical protein 4094794 8359496 Cpin_3330 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122998.1 4094315 R 485918 CDS YP_003122999.1 256422346 8359497 complement(4094815..4095375) 1 NC_013132.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: vpa:VPA0946 hypothetical protein; hypothetical protein 4095375 8359497 Cpin_3331 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003122999.1 4094815 R 485918 CDS YP_003123000.1 256422347 8359498 4095537..4095989 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: aba:Acid345_2954 transcriptional regulator, MarR family; MarR family transcriptional regulator 4095989 8359498 Cpin_3332 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003123000.1 4095537 D 485918 CDS YP_003123001.1 256422348 8359499 4096493..4098736 1 NC_013132.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: bba:Bd2267 potassium/proton antiporter; sodium/hydrogen exchanger 4098736 8359499 Cpin_3333 Chitinophaga pinensis DSM 2588 sodium/hydrogen exchanger YP_003123001.1 4096493 D 485918 CDS YP_003123002.1 256422349 8359500 4098935..4099708 1 NC_013132.1 KEGG: mxa:MXAN_2791 protease B; hypothetical protein 4099708 8359500 Cpin_3334 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123002.1 4098935 D 485918 CDS YP_003123003.1 256422350 8359501 complement(4099794..4100510) 1 NC_013132.1 hypothetical protein 4100510 8359501 Cpin_3335 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123003.1 4099794 R 485918 CDS YP_003123004.1 256422351 8359502 4100856..4101689 1 NC_013132.1 KEGG: vvy:VVA0934 methylase of chemotaxis methyl- accepting protein; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; CheR-typeMCP methyltransferase 4101689 8359502 Cpin_3336 Chitinophaga pinensis DSM 2588 CheR-typeMCP methyltransferase YP_003123004.1 4100856 D 485918 CDS YP_003123005.1 256422352 8359503 4101686..4102252 1 NC_013132.1 PFAM: CheB methylesterase; KEGG: swd:Swoo_1963 CheB methylesterase; CheB methylesterase 4102252 8359503 Cpin_3337 Chitinophaga pinensis DSM 2588 CheB methylesterase YP_003123005.1 4101686 D 485918 CDS YP_003123006.1 256422353 8359504 complement(4102256..4103836) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sus:Acid_2047 PAS/PAC sensor hybrid histidine kinase; response regulator receiver sensor signal transduction histidine kinase 4103836 8359504 Cpin_3338 Chitinophaga pinensis DSM 2588 response regulator receiver sensor signal transduction histidine kinase YP_003123006.1 4102256 R 485918 CDS YP_003123007.1 256422354 8359505 complement(4103994..4108586) 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; RND efflux system, outer membrane lipoprotein, NodT family; PFAM: acriflavin resistance protein; outer membrane efflux protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 4108586 8359505 Cpin_3339 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003123007.1 4103994 R 485918 CDS YP_003123008.1 256422355 8359506 complement(4108733..4109848) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_0374 secretion protein HlyD; RND family efflux transporter MFP subunit 4109848 8359506 Cpin_3340 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003123008.1 4108733 R 485918 CDS YP_003123009.1 256422356 8359507 complement(4110008..4110436) 1 NC_013132.1 hypothetical protein 4110436 8359507 Cpin_3341 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123009.1 4110008 R 485918 CDS YP_003123010.1 256422357 8359508 complement(4110526..4110843) 1 NC_013132.1 hypothetical protein 4110843 8359508 Cpin_3342 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123010.1 4110526 R 485918 CDS YP_003123011.1 256422358 8359509 4110972..4111679 1 NC_013132.1 KEGG: sun:SUN_0406 hypothetical protein; hypothetical protein 4111679 8359509 Cpin_3343 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123011.1 4110972 D 485918 CDS YP_003123012.1 256422359 8359510 4111861..4112385 1 NC_013132.1 hypothetical protein 4112385 8359510 Cpin_3344 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123012.1 4111861 D 485918 CDS YP_003123013.1 256422360 8359511 complement(4112382..4112948) 1 NC_013132.1 KEGG: predicted protein; hypothetical protein 4112948 8359511 Cpin_3345 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123013.1 4112382 R 485918 CDS YP_003123014.1 256422361 8359512 complement(4113356..4113778) 1 NC_013132.1 PFAM: SH3 type 3 domain protein; protein of unknown function DUF1058; KEGG: hypothetical protein; SH3 type 3 domain-containing protein 4113778 8359512 Cpin_3346 Chitinophaga pinensis DSM 2588 SH3 type 3 domain-containing protein YP_003123014.1 4113356 R 485918 CDS YP_003123015.1 256422362 8359513 complement(4113799..4114305) 1 NC_013132.1 PFAM: transport-associated; KEGG: reu:Reut_A1220 transport-associated protein; transport-associated 4114305 8359513 Cpin_3347 Chitinophaga pinensis DSM 2588 transport-associated YP_003123015.1 4113799 R 485918 CDS YP_003123016.1 256422363 8359514 complement(4114347..4114871) 1 NC_013132.1 KEGG: clp-1; CaLPain family; hypothetical protein 4114871 8359514 Cpin_3348 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123016.1 4114347 R 485918 CDS YP_003123017.1 256422364 8359515 4114908..4115039 1 NC_013132.1 hypothetical protein 4115039 8359515 Cpin_3349 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123017.1 4114908 D 485918 CDS YP_003123018.1 256422365 8359516 complement(4115513..4115830) 1 NC_013132.1 PFAM: protein of unknown function DUF59; KEGG: jan:Jann_2523 hypothetical protein; hypothetical protein 4115830 8359516 Cpin_3350 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123018.1 4115513 R 485918 CDS YP_003123019.1 256422366 8359517 complement(4115827..4116273) 1 NC_013132.1 PFAM: Fe-S metabolism associated SufE; KEGG: bba:Bd1961 regulator of cysteine desulfurase activity; Fe-S metabolism associated SufE 4116273 8359517 Cpin_3351 Chitinophaga pinensis DSM 2588 Fe-S metabolism associated SufE YP_003123019.1 4115827 R 485918 CDS YP_003123020.1 256422367 8359518 complement(4116281..4117528) 1 NC_013132.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sus:Acid_7702 cysteine desulfurase; SufS subfamily cysteine desulfurase 4117528 8359518 Cpin_3352 Chitinophaga pinensis DSM 2588 SufS subfamily cysteine desulfurase YP_003123020.1 4116281 R 485918 CDS YP_003123021.1 256422368 8359519 complement(4117624..4118943) 1 NC_013132.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: csa:Csal_1235 FeS assembly protein SufD; FeS assembly protein SufD 4118943 8359519 Cpin_3353 Chitinophaga pinensis DSM 2588 FeS assembly protein SufD YP_003123021.1 4117624 R 485918 CDS YP_003123022.1 256422369 8359520 complement(4118957..4119721) 1 NC_013132.1 KEGG: mxa:MXAN_1154 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 4119721 8359520 Cpin_3354 Chitinophaga pinensis DSM 2588 FeS assembly ATPase SufC YP_003123022.1 4118957 R 485918 CDS YP_003123023.1 256422370 8359521 complement(4119765..4121210) 1 NC_013132.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: lpc:LPC_2698 cysteine desulfurase activator complex subunit SufB; FeS assembly protein SufB 4121210 8359521 Cpin_3355 Chitinophaga pinensis DSM 2588 FeS assembly protein SufB YP_003123023.1 4119765 R 485918 CDS YP_003123024.1 256422371 8359522 complement(4121259..4121588) 1 NC_013132.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bba:Bd1193 scaffold protein for iron-sulfur cluster assembly; iron-sulfur cluster assembly accessory protein 4121588 8359522 Cpin_3356 Chitinophaga pinensis DSM 2588 iron-sulfur cluster assembly accessory protein YP_003123024.1 4121259 R 485918 CDS YP_003123025.1 256422372 8359523 complement(4121688..4122269) 1 NC_013132.1 PFAM: NADPH-dependent FMN reductase; KEGG: pzu:PHZ_c3297 NADPH-dependent FMN reductase family protein; NADPH-dependent FMN reductase 4122269 8359523 Cpin_3357 Chitinophaga pinensis DSM 2588 NADPH-dependent FMN reductase YP_003123025.1 4121688 R 485918 CDS YP_003123026.1 256422373 8359524 4122362..4123024 1 NC_013132.1 KEGG: bmv:BMASAVP1_0030 hypothetical protein; transcriptional regulator 4123024 8359524 Cpin_3358 Chitinophaga pinensis DSM 2588 transcriptional regulator YP_003123026.1 4122362 D 485918 CDS YP_003123027.1 256422374 8359525 complement(4123256..4123669) 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mxa:MXAN_5504 hypothetical protein; hypothetical protein 4123669 8359525 Cpin_3359 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123027.1 4123256 R 485918 CDS YP_003123028.1 256422375 8359526 complement(4123672..4124163) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bmv:BMASAVP1_A1914 phosphinothricin acetyltransferase; N-acetyltransferase GCN5 4124163 8359526 Cpin_3360 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003123028.1 4123672 R 485918 CDS YP_003123029.1 256422376 8359527 complement(4124412..4124969) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein; N-acetyltransferase GCN5 4124969 8359527 Cpin_3361 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003123029.1 4124412 R 485918 CDS YP_003123030.1 256422377 8359528 complement(4124976..4126079) 1 NC_013132.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_1889 transport protein; hypothetical protein 4126079 8359528 Cpin_3362 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123030.1 4124976 R 485918 CDS YP_003123031.1 256422378 8359529 complement(4126137..4127063) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4205 transcriptional regulator, AraC family; AraC family transcriptional regulator 4127063 8359529 Cpin_3363 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123031.1 4126137 R 485918 CDS YP_003123032.1 256422379 8359530 4127228..4127332 1 NC_013132.1 hypothetical protein 4127332 8359530 Cpin_3364 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123032.1 4127228 D 485918 CDS YP_003123033.1 256422380 8359531 4127446..4128357 1 NC_013132.1 hypothetical protein 4128357 8359531 Cpin_3365 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123033.1 4127446 D 485918 CDS YP_003123034.1 256422381 8359532 complement(4128381..4128476) 1 NC_013132.1 hypothetical protein 4128476 8359532 Cpin_3366 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123034.1 4128381 R 485918 CDS YP_003123035.1 256422382 8359533 4128667..4128987 1 NC_013132.1 KEGG: GL17948 gene product from transcript GL17948- RA; hypothetical protein 4128987 8359533 Cpin_3367 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123035.1 4128667 D 485918 CDS YP_003123036.1 256422383 8359534 4129142..4131061 1 NC_013132.1 TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: sfu:Sfum_0287 UbiD family decarboxylases; UbiD family decarboxylase 4131061 8359534 Cpin_3368 Chitinophaga pinensis DSM 2588 UbiD family decarboxylase YP_003123036.1 4129142 D 485918 CDS YP_003123037.1 256422384 8359535 4131033..4131521 1 NC_013132.1 hypothetical protein 4131521 8359535 Cpin_3369 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123037.1 4131033 D 485918 CDS YP_003123038.1 256422385 8359536 complement(4131714..4133300) 1 NC_013132.1 TIGRFAM: peptide chain release factor 3; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; KEGG: glo:Glov_2819 peptide chain release factor 3; peptide chain release factor 3 4133300 8359536 Cpin_3370 Chitinophaga pinensis DSM 2588 peptide chain release factor 3 YP_003123038.1 4131714 R 485918 CDS YP_003123039.1 256422386 8359537 4133371..4134624 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: afw:Anae109_4297 hypothetical protein; hypothetical protein 4134624 8359537 Cpin_3371 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123039.1 4133371 D 485918 CDS YP_003123040.1 256422387 8359538 4134654..4135664 1 NC_013132.1 KEGG: pca:Pcar_1850 O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 4135664 8359538 Cpin_3372 Chitinophaga pinensis DSM 2588 glycoprotease family metalloendopeptidase YP_003123040.1 4134654 D 485918 CDS YP_003123041.1 256422388 8359539 4135674..4136405 1 NC_013132.1 PFAM: methyltransferase small; RNA methylase; KEGG: plu:plu3348 hypothetical protein; methyltransferase small 4136405 8359539 Cpin_3373 Chitinophaga pinensis DSM 2588 methyltransferase small YP_003123041.1 4135674 D 485918 CDS YP_003123042.1 256422389 8359540 complement(4136406..4137611) 1 NC_013132.1 PFAM: alanine dehydrogenase; KEGG: Aass; aminoadipate-semialdehyde synthase; K00291 saccharopine dehydrogenase (NADP+, L-lysine forming); alanine dehydrogenase 4137611 8359540 Cpin_3374 Chitinophaga pinensis DSM 2588 alanine dehydrogenase YP_003123042.1 4136406 R 485918 CDS YP_003123043.1 256422390 8359541 complement(4137727..4138779) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: pfo:Pfl01_3998 esterase/lipase/thioesterase; alpha/beta hydrolase 4138779 8359541 Cpin_3375 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003123043.1 4137727 R 485918 CDS YP_003123044.1 256422391 8359542 complement(4138842..4139690) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator 4139690 8359542 Cpin_3376 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123044.1 4138842 R 485918 CDS YP_003123045.1 256422392 8359543 4140027..4140632 1 NC_013132.1 KEGG: pfl:PFL_4918 lipoprotein; lipoprotein 4140632 8359543 Cpin_3377 Chitinophaga pinensis DSM 2588 lipoprotein YP_003123045.1 4140027 D 485918 CDS YP_003123046.1 256422393 8359544 4140795..4141574 1 NC_013132.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase; KEGG: sme:SMc00956 exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth 4141574 8359544 Cpin_3378 Chitinophaga pinensis DSM 2588 exodeoxyribonuclease III Xth YP_003123046.1 4140795 D 485918 CDS YP_003123047.1 256422394 8359545 complement(4141575..4141979) 1 NC_013132.1 hypothetical protein 4141979 8359545 Cpin_3379 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123047.1 4141575 R 485918 CDS YP_003123048.1 256422395 8359546 complement(4142069..4145236) 1 NC_013132.1 KEGG: pla:Plav_2531 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 4145236 8359546 Cpin_3380 Chitinophaga pinensis DSM 2588 DNA polymerase III subunit alpha YP_003123048.1 4142069 R 485918 CDS YP_003123049.1 256422396 8359547 complement(4145253..4146752) 1 NC_013132.1 KEGG: mag:amb2999 nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA repair nucleotidyltransferase/DNA polymerase 4146752 8359547 Cpin_3381 Chitinophaga pinensis DSM 2588 DNA repair nucleotidyltransferase/DNA polymerase YP_003123049.1 4145253 R 485918 CDS YP_003123050.1 256422397 8359548 complement(4146754..4147488) 1 NC_013132.1 KEGG: pla:Plav_2527 hypothetical protein; hypothetical protein 4147488 8359548 Cpin_3382 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123050.1 4146754 R 485918 CDS YP_003123051.1 256422398 8359549 4147674..4148546 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vsp:VS_II1368 transcriptional regulator, AraC family; AraC family transcriptional regulator 4148546 8359549 Cpin_3383 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123051.1 4147674 D 485918 CDS YP_003123052.1 256422399 8359550 4148644..4149036 1 NC_013132.1 KEGG: spe:Spro_1020 hypothetical protein; hypothetical protein 4149036 8359550 Cpin_3384 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123052.1 4148644 D 485918 CDS YP_003123053.1 256422400 8359551 complement(4149093..4149890) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 4149890 8359551 Cpin_3385 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123053.1 4149093 R 485918 CDS YP_003123054.1 256422401 8359552 complement(4149957..4150793) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL3451 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 4150793 8359552 Cpin_3386 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123054.1 4149957 R 485918 CDS YP_003123055.1 256422402 8359553 complement(4150892..4151938) 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bvi:Bcep1808_5560 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4151938 8359553 Cpin_3387 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003123055.1 4150892 R 485918 CDS YP_003123056.1 256422403 8359554 4152056..4153042 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aby:ABAYE0223 transcriptional regulator (AraC-like); AraC family transcriptional regulator 4153042 8359554 Cpin_3388 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123056.1 4152056 D 485918 CDS YP_003123057.1 256422404 8359555 complement(4153290..4155065) 1 NC_013132.1 PFAM: amidohydrolase; KEGG: reh:H16_B1942 hypothetical protein; amidohydrolase 4155065 8359555 Cpin_3389 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003123057.1 4153290 R 485918 CDS YP_003123058.1 256422405 8359556 4155449..4155688 1 NC_013132.1 hypothetical protein 4155688 8359556 Cpin_3390 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123058.1 4155449 D 485918 CDS YP_003123059.1 256422406 8359557 4156094..4158223 1 NC_013132.1 KEGG: ccs:CCNA_00858 TonB-dependent receptor; outer membrane receptor protein mostly Fe transport 4158223 8359557 Cpin_3391 Chitinophaga pinensis DSM 2588 outer membrane receptor protein mostly Fe transport YP_003123059.1 4156094 D 485918 CDS YP_003123060.1 256422407 8359558 4158312..4161440 1 NC_013132.1 PFAM: lantibiotic dehydratase; KEGG: hypothetical protein; lantibiotic dehydratase 4161440 8359558 Cpin_3392 Chitinophaga pinensis DSM 2588 lantibiotic dehydratase YP_003123060.1 4158312 D 485918 CDS YP_003123061.1 256422408 8359559 4161635..4161814 1 NC_013132.1 hypothetical protein 4161814 8359559 Cpin_3393 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123061.1 4161635 D 485918 CDS YP_003123062.1 256422409 8359560 4161938..4163371 1 NC_013132.1 PFAM: peptidase S41; KEGG: amc:MADE_03133 hypothetical protein; peptidase S41 4163371 8359560 Cpin_3394 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003123062.1 4161938 D 485918 CDS YP_003123063.1 256422410 8359561 4163379..4164551 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: maq:Maqu_0489 histidine kinase internal region; signal transduction histidine kinase LytS 4164551 8359561 Cpin_3395 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003123063.1 4163379 D 485918 CDS YP_003123064.1 256422411 8359562 4164563..4165294 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 4165294 8359562 Cpin_3396 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003123064.1 4164563 D 485918 CDS YP_003123065.1 256422412 8359563 4165388..4166563 1 NC_013132.1 PFAM: lanthionine synthetase C family protein; KEGG: hypothetical protein; lanthionine synthetase C family protein 4166563 8359563 Cpin_3397 Chitinophaga pinensis DSM 2588 lanthionine synthetase C family protein YP_003123065.1 4165388 D 485918 CDS YP_003123066.1 256422413 8359564 4167022..4167546 1 NC_013132.1 PFAM: NGN domain protein; KEGG: sus:Acid_4660 NusG antitermination factor; NusG antitermination factor 4167546 8359564 Cpin_3398 Chitinophaga pinensis DSM 2588 NusG antitermination factor YP_003123066.1 4167022 D 485918 CDS YP_003123067.1 256422414 8359565 4167577..4188945 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; HAD- superfamily phosphatase, subfamily IIIC; methyltransferase FkbM family; FkbH like protein; PFAM: AMP-dependent synthetase and ligase; glyoxalase/bleomycin resistance protein/dioxygenase; alcohol acetyltransferase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase; amino acid adenylation protein 4188945 8359565 Cpin_3399 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003123067.1 4167577 D 485918 CDS YP_003123068.1 256422415 8359566 4188962..4192213 1 NC_013132.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: sdn:Sden_3534 amino acid adenylation; AMP-dependent synthetase and ligase 4192213 8359566 Cpin_3400 Chitinophaga pinensis DSM 2588 AMP-dependent synthetase and ligase YP_003123068.1 4188962 D 485918 CDS YP_003123069.1 256422416 8359567 4192243..4195497 1 NC_013132.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: sdn:Sden_3534 amino acid adenylation; AMP-dependent synthetase and ligase 4195497 8359567 Cpin_3401 Chitinophaga pinensis DSM 2588 AMP-dependent synthetase and ligase YP_003123069.1 4192243 D 485918 CDS YP_003123070.1 256422417 8359568 4195532..4196509 1 NC_013132.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: ppu:PP_4222 SyrP protein; taurine catabolism dioxygenase TauD/TfdA 4196509 8359568 Cpin_3402 Chitinophaga pinensis DSM 2588 taurine catabolism dioxygenase TauD/TfdA YP_003123070.1 4195532 D 485918 CDS YP_003123071.1 256422418 8359569 4196538..4198412 1 NC_013132.1 TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: sdn:Sden_3533 asparagine synthase, glutamine- hydrolyzing; asparagine synthase 4198412 8359569 Cpin_3403 Chitinophaga pinensis DSM 2588 asparagine synthase YP_003123071.1 4196538 D 485918 CDS YP_003123072.1 256422419 8359570 4198440..4199156 1 NC_013132.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: vfm:VFMJ11_1642 aspartate racemase; aspartate racemase 4199156 8359570 Cpin_3404 Chitinophaga pinensis DSM 2588 aspartate racemase YP_003123072.1 4198440 D 485918 CDS YP_003123073.1 256422420 8359571 4199175..4201115 1 NC_013132.1 TIGRFAM: methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit; KEGG: ecm:EcSMS35_0750 methylaspartate mutase, E subunit; methylaspartate mutase subunit E 4201115 8359571 Cpin_3405 Chitinophaga pinensis DSM 2588 methylaspartate mutase subunit E YP_003123073.1 4199175 D 485918 CDS YP_003123074.1 256422421 8359572 4201217..4204531 1 NC_013132.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: sdn:Sden_3534 amino acid adenylation; AMP-dependent synthetase and ligase 4204531 8359572 Cpin_3406 Chitinophaga pinensis DSM 2588 AMP-dependent synthetase and ligase YP_003123074.1 4201217 D 485918 CDS YP_003123075.1 256422422 8359573 4204557..4205582 1 NC_013132.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: reh:H16_B1688 pyoverdine biosynthesis regulatory gene; taurine catabolism dioxygenase TauD/TfdA 4205582 8359573 Cpin_3407 Chitinophaga pinensis DSM 2588 taurine catabolism dioxygenase TauD/TfdA YP_003123075.1 4204557 D 485918 CDS YP_003123076.1 256422423 8359574 4205600..4215223 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; methyltransferase type 11; taurine catabolism dioxygenase TauD/TfdA; methyltransferase type 12; phosphopantetheine- binding; condensation domain protein; KEGG: bsu:BSU03490 surfactin synthetase; amino acid adenylation protein 4215223 8359574 Cpin_3408 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003123076.1 4205600 D 485918 CDS YP_003123077.1 256422424 8359575 4215242..4218412 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bsu:BSU03490 surfactin synthetase; amino acid adenylation protein 4218412 8359575 Cpin_3409 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003123077.1 4215242 D 485918 CDS YP_003123078.1 256422425 8359576 4218439..4223784 1 NC_013132.1 PFAM: condensation domain protein; KR domain protein; beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bte:BTH_II1235 JamP; erythronolide synthase 4223784 8359576 Cpin_3410 Chitinophaga pinensis DSM 2588 erythronolide synthase YP_003123078.1 4218439 D 485918 CDS YP_003123079.1 256422426 8359577 4223804..4224685 1 NC_013132.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: cko:CKO_00862 hypothetical protein; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 4224685 8359577 Cpin_3411 Chitinophaga pinensis DSM 2588 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_003123079.1 4223804 D 485918 CDS YP_003123080.1 256422427 8359578 4224707..4224961 1 NC_013132.1 KEGG: cko:CKO_00863 hypothetical protein; hypothetical protein 4224961 8359578 Cpin_3412 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123080.1 4224707 D 485918 CDS YP_003123081.1 256422428 8359579 4224971..4226128 1 NC_013132.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: lpp:lpp1922 hypothetical protein; acyl-CoA dehydrogenase domain-containing protein 4226128 8359579 Cpin_3413 Chitinophaga pinensis DSM 2588 acyl-CoA dehydrogenase domain-containing protein YP_003123081.1 4224971 D 485918 CDS YP_003123082.1 256422429 8359580 4226141..4227109 1 NC_013132.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: sat:SYN_01149 3-oxoacyl-[acyl-carrier- protein] synthase III; 3-oxoacyl-ACP synthase 4227109 8359580 Cpin_3414 Chitinophaga pinensis DSM 2588 3-oxoacyl-ACP synthase YP_003123082.1 4226141 D 485918 CDS YP_003123083.1 256422430 8359581 4227115..4228158 1 NC_013132.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: nmu:Nmul_A2515 FkbH domain-containing protein; FkbH-like protein 4228158 8359581 Cpin_3415 Chitinophaga pinensis DSM 2588 FkbH-like protein YP_003123083.1 4227115 D 485918 CDS YP_003123084.1 256422431 8359582 4228305..4231367 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: bsu:BSU03490 surfactin synthetase; amino acid adenylation protein 4231367 8359582 Cpin_3416 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003123084.1 4228305 D 485918 CDS YP_003123085.1 256422432 8359583 4231389..4232639 1 NC_013132.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: ppd:Ppro_1743 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 4232639 8359583 Cpin_3417 Chitinophaga pinensis DSM 2588 malonyl CoA-acyl carrier protein transacylase YP_003123085.1 4231389 D 485918 CDS YP_003123086.1 256422433 8359584 4232636..4245700 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; beta- ketoacyl synthase; aminotransferase class-III; phosphopantetheine-binding; condensation domain protein; KEGG: rso:RS05860 peptide synthetase protein; amino acid adenylation protein 4245700 8359584 Cpin_3418 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003123086.1 4232636 D 485918 CDS YP_003123087.1 256422434 8359585 4245697..4256058 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: bcb:BCB4264_A2463 bacitracin synthetase 1; amino acid adenylation protein 4256058 8359585 Cpin_3419 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003123087.1 4245697 D 485918 CDS YP_003123088.1 256422435 8359586 4256070..4257734 1 NC_013132.1 KEGG: hch:HCH_02804 ABC-type siderophore export system, fused ATPase and permease components; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase; cyclic peptide transporter 4257734 8359586 Cpin_3420 Chitinophaga pinensis DSM 2588 cyclic peptide transporter YP_003123088.1 4256070 D 485918 CDS YP_003123089.1 256422436 8359587 4257740..4258426 1 NC_013132.1 PFAM: thioesterase; KEGG: bcz:BCZK1713 thioesterase; thioesterase 4258426 8359587 Cpin_3421 Chitinophaga pinensis DSM 2588 thioesterase YP_003123089.1 4257740 D 485918 CDS YP_003123090.1 256422437 8359588 4258437..4260044 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: rso:RS03728 hypothetical protein; beta-lactamase domain-containing protein 4260044 8359588 Cpin_3422 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003123090.1 4258437 D 485918 CDS YP_003123091.1 256422438 8359589 4260060..4260719 1 NC_013132.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: ajs:Ajs_3071 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 4260719 8359589 Cpin_3423 Chitinophaga pinensis DSM 2588 4'-phosphopantetheinyl transferase YP_003123091.1 4260060 D 485918 CDS YP_003123092.1 256422439 8359590 4260743..4263286 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor; TonB-dependent receptor 4263286 8359590 Cpin_3424 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003123092.1 4260743 D 485918 CDS YP_003123093.1 256422440 8359591 4263397..4265901 1 NC_013132.1 PFAM: peptidase M1 membrane alanine aminopeptidase; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mxa:MXAN_0644 peptidase, M1 (aminopeptidase N) family; peptidase M1 membrane alanine aminopeptidase 4265901 8359591 Cpin_3425 Chitinophaga pinensis DSM 2588 peptidase M1 membrane alanine aminopeptidase YP_003123093.1 4263397 D 485918 CDS YP_003123094.1 256422441 8359592 4265933..4267687 1 NC_013132.1 PFAM: carbamoyltransferase; KEGG: dal:Dalk_4455 carbamoyltransferase; carbamoyltransferase 4267687 8359592 Cpin_3426 Chitinophaga pinensis DSM 2588 carbamoyltransferase YP_003123094.1 4265933 D 485918 CDS YP_003123095.1 256422442 8359593 4267702..4269885 1 NC_013132.1 hypothetical protein 4269885 8359593 Cpin_3427 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123095.1 4267702 D 485918 CDS YP_003123096.1 256422443 8359594 4270594..4272009 1 NC_013132.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: glo:Glov_1631 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 4272009 8359594 Cpin_3428 Chitinophaga pinensis DSM 2588 EmrB/QacA subfamily drug resistance transporter YP_003123096.1 4270594 D 485918 CDS YP_003123097.1 256422444 8359595 4272139..4272681 1 NC_013132.1 hypothetical protein 4272681 8359595 Cpin_3429 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123097.1 4272139 D 485918 CDS YP_003123098.1 256422445 8359596 4272727..4273446 1 NC_013132.1 PFAM: cyclase/dehydrase; KEGG: cyclase/dehydrase; cyclase/dehydrase 4273446 8359596 Cpin_3430 Chitinophaga pinensis DSM 2588 cyclase/dehydrase YP_003123098.1 4272727 D 485918 CDS YP_003123099.1 256422446 8359597 complement(4273574..4275271) 1 NC_013132.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 4275271 8359597 Cpin_3431 Chitinophaga pinensis DSM 2588 ribonucleotide-diphosphate reductase subunit alpha YP_003123099.1 4273574 R 485918 CDS YP_003123100.1 256422447 8359598 complement(4275313..4276287) 1 NC_013132.1 PFAM: ribonucleotide reductase; KEGG: dno:DNO_0608 ribonucleotide reductase, beta subunit; ribonucleotide reductase 4276287 8359598 Cpin_3432 Chitinophaga pinensis DSM 2588 ribonucleotide reductase YP_003123100.1 4275313 R 485918 CDS YP_003123101.1 256422448 8359599 4276683..4279112 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 4279112 8359599 Cpin_3433 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123101.1 4276683 D 485918 CDS YP_003123102.1 256422449 8359600 complement(4279126..4280034) 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: mes:Meso_2206 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4280034 8359600 Cpin_3434 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003123102.1 4279126 R 485918 CDS YP_003123103.1 256422450 8359601 4280620..4282851 1 NC_013132.1 hypothetical protein 4282851 8359601 Cpin_3435 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123103.1 4280620 D 485918 CDS YP_003123104.1 256422451 8359602 4282886..4284850 1 NC_013132.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rru:Rru_A0867 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 4284850 8359602 Cpin_3436 Chitinophaga pinensis DSM 2588 peptidase C14 caspase catalytic subunit p20 YP_003123104.1 4282886 D 485918 CDS YP_003123105.1 256422452 8359603 4284857..4288339 1 NC_013132.1 PFAM: hypothetical protein; peptidase C14 caspase catalytic subunit p20; SMART: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 4288339 8359603 Cpin_3437 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123105.1 4284857 D 485918 CDS YP_003123106.1 256422453 8359604 complement(4288393..4289343) 1 NC_013132.1 PFAM: glycosyl hydrolase family 32 domain protein; KEGG: hypothetical protein; glycoside hydrolase 4289343 8359604 Cpin_3438 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123106.1 4288393 R 485918 CDS YP_003123107.1 256422454 8359605 complement(4289529..4290629) 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bba:Bd2664 FMN oxidoreductase; NADH:flavin oxidoreductase 4290629 8359605 Cpin_3439 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003123107.1 4289529 R 485918 CDS YP_003123108.1 256422455 8359606 4291206..4292273 1 NC_013132.1 KEGG: noc:Noc_1844 hypothetical protein; hypothetical protein 4292273 8359606 Cpin_3440 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123108.1 4291206 D 485918 CDS YP_003123109.1 256422456 8359607 complement(4292351..4292836) 1 NC_013132.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bha:BH3641 transcriptional regulator; AsnC family transcriptional regulator 4292836 8359607 Cpin_3441 Chitinophaga pinensis DSM 2588 AsnC family transcriptional regulator YP_003123109.1 4292351 R 485918 CDS YP_003123110.1 256422457 8359608 4292976..4294433 1 NC_013132.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bba:Bd1534 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 4294433 8359608 Cpin_3442 Chitinophaga pinensis DSM 2588 methylmalonate-semialdehyde dehydrogenase YP_003123110.1 4292976 D 485918 CDS YP_003123111.1 256422458 8359609 4294461..4295813 1 NC_013132.1 PFAM: aminotransferase class-III; KEGG: kpn:KPN_00577 hypothetical protein; class III aminotransferase 4295813 8359609 Cpin_3443 Chitinophaga pinensis DSM 2588 class III aminotransferase YP_003123111.1 4294461 D 485918 CDS YP_003123112.1 256422459 8359610 4295862..4297385 1 NC_013132.1 TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: scl:sce4721 allantoin permease; NCS1 nucleoside transporter family 4297385 8359610 Cpin_3444 Chitinophaga pinensis DSM 2588 NCS1 nucleoside transporter family YP_003123112.1 4295862 D 485918 CDS YP_003123113.1 256422460 8359611 4297369..4298751 1 NC_013132.1 TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; amidohydrolase; KEGG: sus:Acid_7659 dihydropyrimidinase; dihydropyrimidinase 4298751 8359611 Cpin_3445 Chitinophaga pinensis DSM 2588 dihydropyrimidinase YP_003123113.1 4297369 D 485918 CDS YP_003123114.1 256422461 8359612 4298792..4299658 1 NC_013132.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: scl:sce6400 hypothetical protein; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 4299658 8359612 Cpin_3446 Chitinophaga pinensis DSM 2588 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003123114.1 4298792 D 485918 CDS YP_003123115.1 256422462 8359613 4299679..4301040 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI1502 oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4301040 8359613 Cpin_3447 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003123115.1 4299679 D 485918 CDS YP_003123116.1 256422463 8359614 4301051..4302319 1 NC_013132.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 4302319 8359614 Cpin_3448 Chitinophaga pinensis DSM 2588 dihydropyrimidine dehydrogenase YP_003123116.1 4301051 D 485918 CDS YP_003123117.1 256422464 8359615 complement(4302475..4304982) 1 NC_013132.1 KEGG: sus:Acid_6235 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phosphocholine-specific phospholipase C 4304982 8359615 Cpin_3449 Chitinophaga pinensis DSM 2588 phosphocholine-specific phospholipase C YP_003123117.1 4302475 R 485918 CDS YP_003123118.1 256422465 8359616 complement(4305005..4308211) 1 NC_013132.1 KEGG: xcv:XCV2823 TonB-dependent outer membrane receptor; hypothetical protein 4308211 8359616 Cpin_3450 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123118.1 4305005 R 485918 CDS YP_003123119.1 256422466 8359617 complement(4308334..4309284) 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 4309284 8359617 Cpin_3451 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003123119.1 4308334 R 485918 CDS YP_003123120.1 256422467 8359618 complement(4309342..4309938) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: cps:CPS_4364 ECF subfamily RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 4309938 8359618 Cpin_3452 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003123120.1 4309342 R 485918 CDS YP_003123121.1 256422468 8359619 4310107..4310628 1 NC_013132.1 hypothetical protein 4310628 8359619 Cpin_3453 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123121.1 4310107 D 485918 CDS YP_003123122.1 256422469 8359620 complement(4310755..4312653) 1 NC_013132.1 hypothetical protein 4312653 8359620 Cpin_3454 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123122.1 4310755 R 485918 CDS YP_003123123.1 256422470 8359621 complement(4312710..4313261) 1 NC_013132.1 PFAM: methyladenine glycosylase; KEGG: nma:NMA1931 DNA-3-methyladenine glycosylase I; methyladenine glycosylase 4313261 8359621 Cpin_3455 Chitinophaga pinensis DSM 2588 methyladenine glycosylase YP_003123123.1 4312710 R 485918 CDS YP_003123124.1 256422471 8359622 complement(4313392..4314057) 1 NC_013132.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: tbd:Tbd_1948 flavodoxin reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 4314057 8359622 Cpin_3456 Chitinophaga pinensis DSM 2588 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_003123124.1 4313392 R 485918 CDS YP_003123125.1 256422472 8359623 4314128..4314331 1 NC_013132.1 hypothetical protein 4314331 8359623 Cpin_3457 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123125.1 4314128 D 485918 CDS YP_003123126.1 256422473 8359624 complement(4314370..4314732) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: aci:ACIAD1453 hypothetical protein; HxlR family transcriptional regulator 4314732 8359624 Cpin_3458 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123126.1 4314370 R 485918 CDS YP_003123127.1 256422474 8359625 4314828..4315586 1 NC_013132.1 KEGG: bpe:BP2606 hypothetical protein; hypothetical protein 4315586 8359625 Cpin_3459 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123127.1 4314828 D 485918 CDS YP_003123128.1 256422475 8359626 complement(4315789..4318230) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2118 signal transduction histidine kinase; signal transduction histidine kinase 4318230 8359626 Cpin_3460 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003123128.1 4315789 R 485918 CDS YP_003123129.1 256422476 8359627 4318357..4319121 1 NC_013132.1 hypothetical protein 4319121 8359627 Cpin_3461 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123129.1 4318357 D 485918 CDS YP_003123130.1 256422477 8359628 4319414..4319533 1 NC_013132.1 hypothetical protein 4319533 8359628 Cpin_3462 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123130.1 4319414 D 485918 CDS YP_003123131.1 256422478 8359629 4319680..4321077 1 NC_013132.1 SMART: hypothetical protein; KEGG: sus:Acid_2625 PA14 domain-containing protein; hypothetical protein 4321077 8359629 Cpin_3463 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123131.1 4319680 D 485918 CDS YP_003123132.1 256422479 8359630 complement(4321154..4322278) 1 NC_013132.1 PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_A4959 hypothetical protein; hypothetical protein 4322278 8359630 Cpin_3464 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123132.1 4321154 R 485918 CDS YP_003123133.1 256422480 8359631 complement(4322281..4323450) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd0693 major facilitator transporter; major facilitator superfamily protein 4323450 8359631 Cpin_3465 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003123133.1 4322281 R 485918 CDS YP_003123134.1 256422481 8359632 complement(4323582..4324172) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 4324172 8359632 Cpin_3466 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123134.1 4323582 R 485918 CDS YP_003123135.1 256422482 8359633 complement(4324560..4326515) 1 NC_013132.1 PFAM: K potassium transporter; KEGG: lpc:LPC_1572 Kup system potassium uptake protein; K potassium transporter 4326515 8359633 Cpin_3467 Chitinophaga pinensis DSM 2588 K potassium transporter YP_003123135.1 4324560 R 485918 CDS YP_003123136.1 256422483 8359634 4326767..4327786 1 NC_013132.1 KEGG: msl:Msil_3083 hypothetical protein; hypothetical protein 4327786 8359634 Cpin_3468 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123136.1 4326767 D 485918 CDS YP_003123137.1 256422484 8359635 4327916..4330471 1 NC_013132.1 KEGG: efe:EFER_3105 5-methylcytosine- specific restriction enzyme with GTPase activity; hypothetical protein 4330471 8359635 Cpin_3469 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123137.1 4327916 D 485918 CDS YP_003123138.1 256422485 8359636 4330473..4331744 1 NC_013132.1 KEGG: ypk:y3796 hypothetical protein; McrBC 5-methylcytosine restriction system component-like protein 4331744 8359636 Cpin_3470 Chitinophaga pinensis DSM 2588 McrBC 5-methylcytosine restriction system component-like protein YP_003123138.1 4330473 D 485918 CDS YP_003123139.1 256422486 8359637 4331845..4332969 1 NC_013132.1 hypothetical protein 4332969 8359637 Cpin_3471 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123139.1 4331845 D 485918 CDS YP_003123140.1 256422487 8359638 4332992..4336843 1 NC_013132.1 KEGG: pna:Pnap_4437 hypothetical protein; hypothetical protein 4336843 8359638 Cpin_3472 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123140.1 4332992 D 485918 CDS YP_003123141.1 256422488 8359639 complement(4336849..4337919) 1 NC_013132.1 KEGG: scl:sce5685 serine protease; hypothetical protein 4337919 8359639 Cpin_3473 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123141.1 4336849 R 485918 CDS YP_003123142.1 256422489 8359640 complement(4337953..4339686) 1 NC_013132.1 SMART: phospholipase D/transphosphatidylase; KEGG: rpe:RPE_4643 phospholipase D/transphosphatidylase; phospholipase D 4339686 8359640 Cpin_3474 Chitinophaga pinensis DSM 2588 phospholipase D YP_003123142.1 4337953 R 485918 CDS YP_003123143.1 256422490 8359641 complement(4339710..4340627) 1 NC_013132.1 KEGG: scl:sce2229 glutamyl endopeptidase; V8-like Glu-specific endopeptidase-like protein 4340627 8359641 Cpin_3475 Chitinophaga pinensis DSM 2588 V8-like Glu-specific endopeptidase-like protein YP_003123143.1 4339710 R 485918 CDS YP_003123144.1 256422491 8359642 complement(4341222..4341779) 1 NC_013132.1 KEGG: glo:Glov_2329 metal dependent phosphohydrolase; metal dependent phosphohydrolase 4341779 8359642 Cpin_3476 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003123144.1 4341222 R 485918 CDS YP_003123145.1 256422492 8359643 4342147..4342488 1 NC_013132.1 hypothetical protein 4342488 8359643 Cpin_3477 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123145.1 4342147 D 485918 CDS YP_003123146.1 256422493 8359644 complement(4343036..4343503) 1 NC_013132.1 PFAM: YiaAB two helix domain protein; KEGG: sml:Smlt0452 transmembrane protein; YiaAB two helix domain-containing protein 4343503 8359644 Cpin_3478 Chitinophaga pinensis DSM 2588 YiaAB two helix domain-containing protein YP_003123146.1 4343036 R 485918 CDS YP_003123147.1 256422494 8359645 4343645..4345174 1 NC_013132.1 hypothetical protein 4345174 8359645 Cpin_3479 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123147.1 4343645 D 485918 CDS YP_003123148.1 256422495 8359646 complement(4345175..4345873) 1 NC_013132.1 KEGG: aby:ABAYE2461 hypothetical protein; hypothetical protein 4345873 8359646 Cpin_3480 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123148.1 4345175 R 485918 CDS YP_003123149.1 256422496 8359647 complement(4345939..4346292) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: pub:SAR11_0860 transcription regulator; HxlR family transcriptional regulator 4346292 8359647 Cpin_3481 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123149.1 4345939 R 485918 CDS YP_003123150.1 256422497 8359648 4346373..4347119 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2727 hypothetical protein; short-chain dehydrogenase/reductase SDR 4347119 8359648 Cpin_3482 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123150.1 4346373 D 485918 CDS YP_003123151.1 256422498 8359649 4347375..4347725 1 NC_013132.1 PFAM: protein of unknown function DUF1486; KEGG: afw:Anae109_1067 hypothetical protein; hypothetical protein 4347725 8359649 Cpin_3483 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123151.1 4347375 D 485918 CDS YP_003123152.1 256422499 8359650 4347954..4348949 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase; short-chain dehydrogenase/reductase SDR 4348949 8359650 Cpin_3484 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123152.1 4347954 D 485918 CDS YP_003123153.1 256422500 8359651 complement(4349379..4350131) 1 NC_013132.1 hypothetical protein 4350131 8359651 Cpin_3485 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123153.1 4349379 R 485918 CDS YP_003123154.1 256422501 8359652 complement(4350447..4351295) 1 NC_013132.1 hypothetical protein 4351295 8359652 Cpin_3486 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123154.1 4350447 R 485918 CDS YP_003123155.1 256422502 8359653 4351585..4352406 1 NC_013132.1 PFAM: peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; KEGG: bra:BRADO1254 hypothetical protein; peptidase M10A and M12B matrixin and adamalysin 4352406 8359653 Cpin_3487 Chitinophaga pinensis DSM 2588 peptidase M10A and M12B matrixin and adamalysin YP_003123155.1 4351585 D 485918 CDS YP_003123156.1 256422503 8359655 4352945..4354222 1 NC_013132.1 KEGG: sfr:Sfri_2538 hypothetical protein; hypothetical protein 4354222 8359655 Cpin_3489 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123156.1 4352945 D 485918 CDS YP_003123157.1 256422504 8359657 join(4355363..4355623,4355623..4356474) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase; transposase IS3/IS911 family protein 4356474 8359657 Cpin_3491 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003123157.1 4355363 D 485918 CDS YP_003123158.1 256422505 8359658 complement(4356569..4356904) 1 NC_013132.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: cak:Caul_5271 ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 4356904 8359658 Cpin_3492 Chitinophaga pinensis DSM 2588 ethyl tert-butyl ether degradation EthD YP_003123158.1 4356569 R 485918 CDS YP_003123159.1 256422506 8359659 complement(4357103..4357693) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: vsp:VS_0381 transcriptional regulator; TetR family transcriptional regulator 4357693 8359659 Cpin_3493 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003123159.1 4357103 R 485918 CDS YP_003123160.1 256422507 8359660 complement(4357700..4359289) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbd:CBUD_0854 ABC transporter ATP-binding protein; ABC transporter 4359289 8359660 Cpin_3494 Chitinophaga pinensis DSM 2588 ABC transporter YP_003123160.1 4357700 R 485918 CDS YP_003123161.1 256422508 8359661 4359769..4360560 1 NC_013132.1 hypothetical protein 4360560 8359661 Cpin_3495 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123161.1 4359769 D 485918 CDS YP_003123162.1 256422509 8359662 4360663..4361085 1 NC_013132.1 PFAM: cupin; KEGG: glo:Glov_2380 cupin 2 conserved barrel domain protein; cupin 4361085 8359662 Cpin_3496 Chitinophaga pinensis DSM 2588 cupin YP_003123162.1 4360663 D 485918 CDS YP_003123163.1 256422510 8359663 4361756..4362298 1 NC_013132.1 hypothetical protein 4362298 8359663 Cpin_3497 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123163.1 4361756 D 485918 CDS YP_003123164.1 256422511 8359665 4363369..4363731 1 NC_013132.1 hypothetical protein 4363731 8359665 Cpin_3499 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123164.1 4363369 D 485918 CDS YP_003123165.1 256422512 8359666 4363838..4364134 1 NC_013132.1 hypothetical protein 4364134 8359666 Cpin_3500 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123165.1 4363838 D 485918 CDS YP_003123166.1 256422513 8359667 4365422..4367170 1 NC_013132.1 KEGG: pnu:Pnuc_1696 hypothetical protein; ATP-dependent endonuclease of the OLD family-like protein 4367170 8359667 Cpin_3501 Chitinophaga pinensis DSM 2588 ATP-dependent endonuclease of the OLD family-like protein YP_003123166.1 4365422 D 485918 CDS YP_003123167.1 256422514 8359668 4367280..4368206 1 NC_013132.1 hypothetical protein 4368206 8359668 Cpin_3502 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123167.1 4367280 D 485918 CDS YP_003123168.1 256422515 8359669 4368862..4369761 1 NC_013132.1 hypothetical protein 4369761 8359669 Cpin_3503 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123168.1 4368862 D 485918 CDS YP_003123169.1 256422516 8359670 4369731..4369937 1 NC_013132.1 hypothetical protein 4369937 8359670 Cpin_3504 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123169.1 4369731 D 485918 CDS YP_003123170.1 256422517 8359671 4369939..4370232 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pap:PSPA7_6075 transcriptional regulator; XRE family transcriptional regulator 4370232 8359671 Cpin_3505 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003123170.1 4369939 D 485918 CDS YP_003123171.1 256422518 8359672 complement(4370331..4371242) 1 NC_013132.1 hypothetical protein 4371242 8359672 Cpin_3506 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123171.1 4370331 R 485918 CDS YP_003123172.1 256422519 8359673 4371531..4371749 1 NC_013132.1 hypothetical protein 4371749 8359673 Cpin_3507 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123172.1 4371531 D 485918 CDS YP_003123173.1 256422520 8359674 4372112..4373224 1 NC_013132.1 KEGG: pol:Bpro_4977 hypothetical protein; hypothetical protein 4373224 8359674 Cpin_3508 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123173.1 4372112 D 485918 CDS YP_003123174.1 256422521 8359675 4373275..4374993 1 NC_013132.1 KEGG: pol:Bpro_4976 hypothetical protein; hypothetical protein 4374993 8359675 Cpin_3509 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123174.1 4373275 D 485918 CDS YP_003123175.1 256422522 8359676 4375451..4376407 1 NC_013132.1 hypothetical protein 4376407 8359676 Cpin_3510 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123175.1 4375451 D 485918 CDS YP_003123176.1 256422523 8359677 4376400..4377011 1 NC_013132.1 hypothetical protein 4377011 8359677 Cpin_3511 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123176.1 4376400 D 485918 CDS YP_003123177.1 256422524 8359678 4377268..4377507 1 NC_013132.1 KEGG: sun:SUN_2264 hypothetical protein; hypothetical protein 4377507 8359678 Cpin_3512 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123177.1 4377268 D 485918 CDS YP_003123178.1 256422525 8359679 complement(join(4377517..4378368,4378368..4378628)) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase; transposase IS3/IS911 family protein 4378628 8359679 Cpin_3513 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003123178.1 4377517 R 485918 CDS YP_003123179.1 256422526 8359680 4378754..4380442 1 NC_013132.1 KEGG: bcu:BCAH820_1018 hypothetical protein; hypothetical protein 4380442 8359680 Cpin_3514 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123179.1 4378754 D 485918 CDS YP_003123180.1 256422527 8359681 4380414..4381559 1 NC_013132.1 KEGG: abu:Abu_0109 hypothetical protein; hypothetical protein 4381559 8359681 Cpin_3515 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123180.1 4380414 D 485918 CDS YP_003123181.1 256422528 8359682 complement(4381732..4382784) 1 NC_013132.1 PFAM: integrase catalytic region; KEGG: rms:RMA_0748 transposase; integrase catalytic subunit 4382784 8359682 Cpin_3516 Chitinophaga pinensis DSM 2588 integrase catalytic subunit YP_003123181.1 4381732 R 485918 CDS YP_003123182.1 256422529 8359683 join(4383253..4383513,4383513..4384364) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase; transposase IS3/IS911 family protein 4384364 8359683 Cpin_3517 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003123182.1 4383253 D 485918 CDS YP_003123183.1 256422530 8359684 complement(4384664..4384894) 1 NC_013132.1 hypothetical protein 4384894 8359684 Cpin_3518 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123183.1 4384664 R 485918 CDS YP_003123184.1 256422531 8359685 4385376..4386305 1 NC_013132.1 KEGG: abu:Abu_0794 two-component sensor histidine kinase; hypothetical protein 4386305 8359685 Cpin_3519 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123184.1 4385376 D 485918 CDS YP_003123185.1 256422532 8359686 4386445..4386864 1 NC_013132.1 response regulator receiver protein 4386864 8359686 Cpin_3520 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003123185.1 4386445 D 485918 CDS YP_003123186.1 256422533 8359687 4386857..4387432 1 NC_013132.1 hypothetical protein 4387432 8359687 Cpin_3521 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123186.1 4386857 D 485918 CDS YP_003123187.1 256422534 8359688 4388181..4388438 1 NC_013132.1 hypothetical protein 4388438 8359688 Cpin_3522 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123187.1 4388181 D 485918 CDS YP_003123188.1 256422535 8359689 4388380..4390086 1 NC_013132.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase; resolvase domain-containing protein 4390086 8359689 Cpin_3523 Chitinophaga pinensis DSM 2588 resolvase domain-containing protein YP_003123188.1 4388380 D 485918 CDS YP_003123189.1 256422536 8359691 4390165..4391136 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bca:BCE_2770 oxidoreductase, zinc-binding; alcohol dehydrogenase GroES domain-containing protein 4391136 8359691 Cpin_3524 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003123189.1 4390165 D 485918 CDS YP_003123190.1 256422537 8359692 4391143..4392060 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 4392060 8359692 Cpin_3525 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123190.1 4391143 D 485918 CDS YP_003123191.1 256422538 8359693 4392158..4392985 1 NC_013132.1 hypothetical protein 4392985 8359693 Cpin_3526 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123191.1 4392158 D 485918 CDS YP_003123192.1 256422539 8359694 complement(4393040..4393489) 1 NC_013132.1 hypothetical protein 4393489 8359694 Cpin_3527 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123192.1 4393040 R 485918 CDS YP_003123193.1 256422540 8359695 complement(4393646..4394878) 1 NC_013132.1 PFAM: sodium/hydrogen exchanger; KEGG: dal:Dalk_1995 sodium/hydrogen exchanger; sodium/hydrogen exchanger 4394878 8359695 Cpin_3528 Chitinophaga pinensis DSM 2588 sodium/hydrogen exchanger YP_003123193.1 4393646 R 485918 CDS YP_003123194.1 256422541 8359696 4395121..4395978 1 NC_013132.1 KEGG: ccv:CCV52592_0768 hypothetical protein; hypothetical protein 4395978 8359696 Cpin_3529 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123194.1 4395121 D 485918 CDS YP_003123195.1 256422542 8359697 complement(4395981..4396997) 1 NC_013132.1 PFAM: aminoglycoside phosphotransferase; Choline/ethanolamine kinase; KEGG: sus:Acid_4768 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 4396997 8359697 Cpin_3530 Chitinophaga pinensis DSM 2588 aminoglycoside phosphotransferase YP_003123195.1 4395981 R 485918 CDS YP_003123196.1 256422543 8359698 complement(4397009..4397407) 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rfr:Rfer_0178 MarR family transcriptional regulator; MarR family transcriptional regulator 4397407 8359698 Cpin_3531 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003123196.1 4397009 R 485918 CDS YP_003123197.1 256422544 8359699 complement(4397508..4397861) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: dal:Dalk_2971 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 4397861 8359699 Cpin_3532 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123197.1 4397508 R 485918 CDS YP_003123198.1 256422545 8359700 4397944..4398747 1 NC_013132.1 KEGG: met:M446_5919 esterase; esterase 4398747 8359700 Cpin_3533 Chitinophaga pinensis DSM 2588 esterase YP_003123198.1 4397944 D 485918 CDS YP_003123199.1 256422546 8359701 4398928..4399857 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aby:ABAYE0223 transcriptional regulator (AraC-like); AraC family transcriptional regulator 4399857 8359701 Cpin_3534 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123199.1 4398928 D 485918 CDS YP_003123200.1 256422547 8359702 4399944..4401164 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: cbg:CbuG_1638 multidrug resistance transporter, Bcr family; major facilitator superfamily protein 4401164 8359702 Cpin_3535 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003123200.1 4399944 D 485918 CDS YP_003123201.1 256422548 8359703 complement(4401255..4403435) 1 NC_013132.1 PFAM: carbohydrate-binding protein; SMART: cellulose binding type IV; beta and gamma crystallin; KEGG: cja:CJA_0276 carbohydrate binding protein, , cbp6B; carbohydrate-binding protein 4403435 8359703 Cpin_3536 Chitinophaga pinensis DSM 2588 carbohydrate-binding protein YP_003123201.1 4401255 R 485918 CDS YP_003123202.1 256422549 8359704 complement(4403801..4404865) 1 NC_013132.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator 4404865 8359704 Cpin_3537 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003123202.1 4403801 R 485918 CDS YP_003123203.1 256422550 8359705 4405093..4408113 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 4408113 8359705 Cpin_3538 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123203.1 4405093 D 485918 CDS YP_003123204.1 256422551 8359706 4408135..4409625 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 4409625 8359706 Cpin_3539 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003123204.1 4408135 D 485918 CDS YP_003123205.1 256422552 8359707 4409650..4412217 1 NC_013132.1 KEGG: scl:sce1308 Terpenoid cylases/protein prenyltransferase-domain-containing protein; hypothetical protein 4412217 8359707 Cpin_3540 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123205.1 4409650 D 485918 CDS YP_003123206.1 256422553 8359708 4412214..4414007 1 NC_013132.1 PFAM: Na+/solute symporter; KEGG: vsp:VS_1241 sodium/substrate symport; Na+/solute symporter 4414007 8359708 Cpin_3541 Chitinophaga pinensis DSM 2588 Na+/solute symporter YP_003123206.1 4412214 D 485918 CDS YP_003123207.1 256422554 8359709 4413985..4416261 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 4416261 8359709 Cpin_3542 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123207.1 4413985 D 485918 CDS YP_003123208.1 256422555 8359710 4416482..4418404 1 NC_013132.1 hypothetical protein 4418404 8359710 Cpin_3543 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123208.1 4416482 D 485918 CDS YP_003123209.1 256422556 8359711 complement(4418405..4418827) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tgr:Tgr7_2587 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 4418827 8359711 Cpin_3544 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003123209.1 4418405 R 485918 CDS YP_003123210.1 256422557 8359712 complement(4418838..4419461) 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bxe:Bxe_B1426 (acyl-carrier protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) 4419461 8359712 Cpin_3545 Chitinophaga pinensis DSM 2588 NAD(P)H dehydrogenase (quinone) YP_003123210.1 4418838 R 485918 CDS YP_003123211.1 256422558 8359713 complement(4419473..4419916) 1 NC_013132.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: afw:Anae109_3146 alkylhydroperoxidase; alkylhydroperoxidase 4419916 8359713 Cpin_3546 Chitinophaga pinensis DSM 2588 alkylhydroperoxidase YP_003123211.1 4419473 R 485918 CDS YP_003123212.1 256422559 8359714 4420000..4421433 1 NC_013132.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: nwi:Nwi_0881 GntR family transcriptional regulator; GntR family transcriptional regulator 4421433 8359714 Cpin_3547 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003123212.1 4420000 D 485918 CDS YP_003123213.1 256422560 8359715 4421506..4423023 1 NC_013132.1 KEGG: bsu:BSU36460 hypothetical protein; hypothetical protein 4423023 8359715 Cpin_3548 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123213.1 4421506 D 485918 CDS YP_003123214.1 256422561 8359716 4423091..4423486 1 NC_013132.1 hypothetical protein 4423486 8359716 Cpin_3549 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123214.1 4423091 D 485918 CDS YP_003123215.1 256422562 8359717 4423841..4424761 1 NC_013132.1 KEGG: sus:Acid_1173 alpha/beta hydrolase; alpha/beta hydrolase 4424761 8359717 Cpin_3550 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003123215.1 4423841 D 485918 CDS YP_003123216.1 256422563 8359718 complement(4424729..4426051) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: cja:CJA_1573 Ser/Thr protein phosphatase family protein family; metallophosphoesterase 4426051 8359718 Cpin_3551 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003123216.1 4424729 R 485918 CDS YP_003123217.1 256422564 8359719 complement(4426060..4427529) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 4427529 8359719 Cpin_3552 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123217.1 4426060 R 485918 CDS YP_003123218.1 256422565 8359720 complement(4427541..4430786) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 4430786 8359720 Cpin_3553 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123218.1 4427541 R 485918 CDS YP_003123219.1 256422566 8359721 complement(4430917..4431897) 1 NC_013132.1 PFAM: FecR protein; KEGG: smt:Smal_2017 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 4431897 8359721 Cpin_3554 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003123219.1 4430917 R 485918 CDS YP_003123220.1 256422567 8359722 complement(4431961..4432557) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rpt:Rpal_0551 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 4432557 8359722 Cpin_3555 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003123220.1 4431961 R 485918 CDS YP_003123221.1 256422568 8359723 complement(4432629..4433738) 1 NC_013132.1 KEGG: scl:sce7119 serine protease; hypothetical protein 4433738 8359723 Cpin_3556 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123221.1 4432629 R 485918 CDS YP_003123222.1 256422569 8359724 complement(4433738..4436434) 1 NC_013132.1 KEGG: scl:sce7152 hypothetical protein; hypothetical protein 4436434 8359724 Cpin_3557 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123222.1 4433738 R 485918 CDS YP_003123223.1 256422570 8359725 complement(4436441..4437634) 1 NC_013132.1 hypothetical protein 4437634 8359725 Cpin_3558 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123223.1 4436441 R 485918 CDS YP_003123224.1 256422571 8359726 4437943..4439886 1 NC_013132.1 KEGG: SLEI family protein; hypothetical protein 4439886 8359726 Cpin_3559 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123224.1 4437943 D 485918 CDS YP_003123225.1 256422572 8359727 complement(4439956..4442331) 1 NC_013132.1 PFAM: Protein of unknown function DUF1963; leucine- rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: son:SO_0350 hypothetical protein; hypothetical protein 4442331 8359727 Cpin_3560 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123225.1 4439956 R 485918 CDS YP_003123226.1 256422573 8359728 complement(4442485..4442772) 1 NC_013132.1 KEGG: eli:ELI_10520 hypothetical protein; hypothetical protein 4442772 8359728 Cpin_3561 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123226.1 4442485 R 485918 CDS YP_003123227.1 256422574 8359730 complement(4443172..4443843) 1 NC_013132.1 PFAM: protein of unknown function DUF752; KEGG: slo:Shew_3321 hypothetical protein; hypothetical protein 4443843 8359730 Cpin_3563 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123227.1 4443172 R 485918 CDS YP_003123228.1 256422575 8359731 4443925..4444068 1 NC_013132.1 hypothetical protein 4444068 8359731 Cpin_3564 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123228.1 4443925 D 485918 CDS YP_003123229.1 256422576 8359732 4444209..4444583 1 NC_013132.1 hypothetical protein 4444583 8359732 Cpin_3565 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123229.1 4444209 D 485918 CDS YP_003123230.1 256422577 8359733 4444580..4445737 1 NC_013132.1 hypothetical protein 4445737 8359733 Cpin_3566 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123230.1 4444580 D 485918 CDS YP_003123231.1 256422578 8359734 4446034..4447221 1 NC_013132.1 KEGG: smt:Smal_2072 hypothetical protein; hypothetical protein 4447221 8359734 Cpin_3567 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123231.1 4446034 D 485918 CDS YP_003123232.1 256422579 8359735 complement(4447261..4447944) 1 NC_013132.1 hypothetical protein 4447944 8359735 Cpin_3568 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123232.1 4447261 R 485918 CDS YP_003123233.1 256422580 8359736 4448160..4448759 1 NC_013132.1 hypothetical protein 4448759 8359736 Cpin_3569 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123233.1 4448160 D 485918 CDS YP_003123234.1 256422581 8359737 complement(4448866..4450125) 1 NC_013132.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: bcb:BCB4264_A2073 glycosyltransferase, MGT family; MGT family glycosyltransferase 4450125 8359737 Cpin_3570 Chitinophaga pinensis DSM 2588 MGT family glycosyltransferase YP_003123234.1 4448866 R 485918 CDS YP_003123235.1 256422582 8359738 complement(4450195..4451004) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator; AraC family transcriptional regulator 4451004 8359738 Cpin_3571 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123235.1 4450195 R 485918 CDS YP_003123236.1 256422583 8359739 4451484..4452590 1 NC_013132.1 KEGG: sus:Acid_3488 hypothetical protein; hypothetical protein 4452590 8359739 Cpin_3572 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123236.1 4451484 D 485918 CDS YP_003123237.1 256422584 8359740 4452669..4453256 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: pfl:PFL_2927 TetR family transcriptional regulator; TetR family transcriptional regulator 4453256 8359740 Cpin_3573 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003123237.1 4452669 D 485918 CDS YP_003123238.1 256422585 8359741 complement(4453298..4453420) 1 NC_013132.1 hypothetical protein 4453420 8359741 Cpin_3574 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123238.1 4453298 R 485918 CDS YP_003123239.1 256422586 8359742 4453693..4454832 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein; KEGG: rme:Rmet_1701 secretion protein HlyD; RND family efflux transporter MFP subunit 4454832 8359742 Cpin_3575 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003123239.1 4453693 D 485918 CDS YP_003123240.1 256422587 8359743 4454870..4458052 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: aha:AHA_2960 RND efflux transporter; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 4458052 8359743 Cpin_3576 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003123240.1 4454870 D 485918 CDS YP_003123241.1 256422588 8359744 4458049..4459467 1 NC_013132.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sfu:Sfum_1456 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 4459467 8359744 Cpin_3577 Chitinophaga pinensis DSM 2588 NodT family RND efflux system outer membrane lipoprotein YP_003123241.1 4458049 D 485918 CDS YP_003123242.1 256422589 8359745 4459532..4460092 1 NC_013132.1 hypothetical protein 4460092 8359745 Cpin_3578 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123242.1 4459532 D 485918 CDS YP_003123243.1 256422590 8359746 4460151..4460852 1 NC_013132.1 KEGG: sfu:Sfum_2019 hypothetical protein; hypothetical protein 4460852 8359746 Cpin_3579 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123243.1 4460151 D 485918 CDS YP_003123244.1 256422591 8359747 4460922..4462085 1 NC_013132.1 KEGG: sfu:Sfum_2019 hypothetical protein; hypothetical protein 4462085 8359747 Cpin_3580 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123244.1 4460922 D 485918 CDS YP_003123245.1 256422592 8359748 4462085..4462795 1 NC_013132.1 KEGG: sfu:Sfum_2019 hypothetical protein; hypothetical protein 4462795 8359748 Cpin_3581 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123245.1 4462085 D 485918 CDS YP_003123246.1 256422593 8359749 4462800..4463528 1 NC_013132.1 hypothetical protein 4463528 8359749 Cpin_3582 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123246.1 4462800 D 485918 CDS YP_003123247.1 256422594 8359750 complement(4463577..4464029) 1 NC_013132.1 KEGG: sus:Acid_4157 hypothetical protein; hypothetical protein 4464029 8359750 Cpin_3583 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123247.1 4463577 R 485918 CDS YP_003123248.1 256422595 8359751 complement(4464060..4464878) 1 NC_013132.1 hypothetical protein 4464878 8359751 Cpin_3584 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123248.1 4464060 R 485918 CDS YP_003123249.1 256422596 8359752 4465038..4465613 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 4465613 8359752 Cpin_3585 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123249.1 4465038 D 485918 CDS YP_003123250.1 256422597 8359753 4465691..4467889 1 NC_013132.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aav:Aave_0105 radical SAM domain protein; radical SAM protein 4467889 8359753 Cpin_3586 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003123250.1 4465691 D 485918 CDS YP_003123251.1 256422598 8359754 4467890..4469818 1 NC_013132.1 PFAM: hypothetical protein; Diverse 7TM receptor extracellular region 2; KEGG: mms:mma_1623 diguanylate cyclase; hypothetical protein 4469818 8359754 Cpin_3587 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123251.1 4467890 D 485918 CDS YP_003123252.1 256422599 8359755 4470233..4473193 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 4473193 8359755 Cpin_3588 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123252.1 4470233 D 485918 CDS YP_003123253.1 256422600 8359756 4473205..4474683 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 4474683 8359756 Cpin_3589 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003123253.1 4473205 D 485918 CDS YP_003123254.1 256422601 8359757 4474792..4476252 1 NC_013132.1 PFAM: glycoside hydrolase family 30; KEGG: rfr:Rfer_1106 glycoside hydrolase family protein; glucan endo-1,6-beta-glucosidase 4476252 8359757 Cpin_3590 Chitinophaga pinensis DSM 2588 glucan endo-1,6-beta-glucosidase YP_003123254.1 4474792 D 485918 CDS YP_003123255.1 256422602 8359758 4476951..4477694 1 NC_013132.1 hypothetical protein 4477694 8359758 Cpin_3591 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123255.1 4476951 D 485918 CDS YP_003123256.1 256422603 8359759 complement(4478508..4479836) 1 NC_013132.1 TIGRFAM: sugar transporter; PFAM: ABC transporter substrate-binding protein; major facilitator superfamily MFS_1; KEGG: kpn:KPN_02872 general substrate transporter; sugar transporter 4479836 8359759 Cpin_3592 Chitinophaga pinensis DSM 2588 sugar transporter YP_003123256.1 4478508 R 485918 CDS YP_003123257.1 256422604 8359760 complement(4479873..4480940) 1 NC_013132.1 PFAM: aldose 1-epimerase; KEGG: csa:Csal_0799 aldose 1-epimerase; aldose 1-epimerase 4480940 8359760 Cpin_3593 Chitinophaga pinensis DSM 2588 aldose 1-epimerase YP_003123257.1 4479873 R 485918 CDS YP_003123258.1 256422605 8359761 complement(4480934..4484236) 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: spe:Spro_4231 hypothetical protein; hypothetical protein 4484236 8359761 Cpin_3594 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123258.1 4480934 R 485918 CDS YP_003123259.1 256422606 8359762 complement(4484264..4486459) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 4486459 8359762 Cpin_3595 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123259.1 4484264 R 485918 CDS YP_003123260.1 256422607 8359763 4486666..4487571 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: maq:Maqu_2134 AraC protein, arabinose- binding/dimerisation; AraC family transcriptional regulator 4487571 8359763 Cpin_3596 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123260.1 4486666 D 485918 CDS YP_003123261.1 256422608 8359764 complement(4487661..4488284) 1 NC_013132.1 PFAM: haloacid dehalogenase; KEGG: hypothetical protein; haloacid dehalogenase 4488284 8359764 Cpin_3597 Chitinophaga pinensis DSM 2588 haloacid dehalogenase YP_003123261.1 4487661 R 485918 CDS YP_003123262.1 256422609 8359765 complement(4488310..4488447) 1 NC_013132.1 hypothetical protein 4488447 8359765 Cpin_3598 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123262.1 4488310 R 485918 CDS YP_003123263.1 256422610 8359766 4488559..4489779 1 NC_013132.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; KEGG: scl:sce0169 peptidase; peptidase S41 4489779 8359766 Cpin_3599 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003123263.1 4488559 D 485918 CDS YP_003123264.1 256422611 8359767 4489836..4490807 1 NC_013132.1 PFAM: FecR protein; KEGG: psp:PSPPH_2117 FecR protein superfamily protein; anti-FecI sigma factor FecR 4490807 8359767 Cpin_3600 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003123264.1 4489836 D 485918 CDS YP_003123265.1 256422612 8359768 4490895..4494167 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_0272 TonB-dependent receptor; TonB-dependent receptor 4494167 8359768 Cpin_3601 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003123265.1 4490895 D 485918 CDS YP_003123266.1 256422613 8359769 4494249..4495598 1 NC_013132.1 KEGG: scl:sce5067 hypothetical protein; hypothetical protein 4495598 8359769 Cpin_3602 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123266.1 4494249 D 485918 CDS YP_003123267.1 256422614 8359770 4495686..4496423 1 NC_013132.1 hypothetical protein 4496423 8359770 Cpin_3603 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123267.1 4495686 D 485918 CDS YP_003123268.1 256422615 8359771 complement(4496613..4497125) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: csa:Csal_1098 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit 4497125 8359771 Cpin_3604 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003123268.1 4496613 R 485918 CDS YP_003123269.1 256422616 8359772 4497719..4498243 1 NC_013132.1 PFAM: NGN domain protein; SMART: NGN domain protein; KEGG: aba:Acid345_3498 transcription antitermination protein NusG; NusG antitermination factor 4498243 8359772 Cpin_3605 Chitinophaga pinensis DSM 2588 NusG antitermination factor YP_003123269.1 4497719 D 485918 CDS YP_003123270.1 256422617 8359774 4498622..4498894 1 NC_013132.1 hypothetical protein 4498894 8359774 Cpin_3607 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123270.1 4498622 D 485918 CDS YP_003123271.1 256422618 8359775 4499483..4500850 1 NC_013132.1 KEGG: nmu:Nmul_A2087 hypothetical protein; hypothetical protein 4500850 8359775 Cpin_3608 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123271.1 4499483 D 485918 CDS YP_003123272.1 256422619 8359776 4500977..4501405 1 NC_013132.1 KEGG: eta:ETA_05100 hypothetical protein; hypothetical protein 4501405 8359776 Cpin_3609 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123272.1 4500977 D 485918 CDS YP_003123273.1 256422620 8359777 4501615..4503984 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 4503984 8359777 Cpin_3610 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123273.1 4501615 D 485918 CDS YP_003123274.1 256422621 8359778 complement(4504135..4505835) 1 NC_013132.1 KEGG: mxa:MXAN_0168 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; PAS/PAC sensor signal transduction histidine kinase 4505835 8359778 Cpin_3611 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003123274.1 4504135 R 485918 CDS YP_003123275.1 256422622 8359779 complement(4505837..4506961) 1 NC_013132.1 PFAM: Osmosensitive K channel His kinase sensor; KEGG: mxa:MXAN_0167 osmosensitive K+ channel His kinase sensor domain/universal stress domain protein; osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD 4506961 8359779 Cpin_3612 Chitinophaga pinensis DSM 2588 osmosensitive K channel signal transduction histidine kinase, sensor subunit KdpD YP_003123275.1 4505837 R 485918 CDS YP_003123276.1 256422623 8359780 complement(4507075..4507668) 1 NC_013132.1 KEGG: pfl:PFL_5195 acetyltransferase; hypothetical protein 4507668 8359780 Cpin_3613 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123276.1 4507075 R 485918 CDS YP_003123277.1 256422624 8359781 complement(4507680..4508243) 1 NC_013132.1 KEGG: mlo:mll3129 potassium-transporting atpase C chain, KdpC; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 4508243 8359781 Cpin_3614 Chitinophaga pinensis DSM 2588 potassium-transporting ATPase subunit C YP_003123277.1 4507680 R 485918 CDS YP_003123278.1 256422625 8359782 complement(4508265..4510322) 1 NC_013132.1 TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; KEGG: potassium-transporting atpase b chain (potassium- translocating atpase b chain); K+-transporting ATPase subunit B 4510322 8359782 Cpin_3615 Chitinophaga pinensis DSM 2588 K+-transporting ATPase subunit B YP_003123278.1 4508265 R 485918 CDS YP_003123279.1 256422626 8359783 complement(4510407..4512119) 1 NC_013132.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 4512119 8359783 Cpin_3616 Chitinophaga pinensis DSM 2588 potassium-transporting ATPase subunit A YP_003123279.1 4510407 R 485918 CDS YP_003123280.1 256422627 8359784 complement(4512343..4512702) 1 NC_013132.1 hypothetical protein 4512702 8359784 Cpin_3617 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123280.1 4512343 R 485918 CDS YP_003123281.1 256422628 8359785 4513021..4513809 1 NC_013132.1 PFAM: protein of unknown function DUF1223; KEGG: aba:Acid345_3896 protein of unknown function DUF1223; hypothetical protein 4513809 8359785 Cpin_3618 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123281.1 4513021 D 485918 CDS YP_003123282.1 256422629 8359786 4513847..4514296 1 NC_013132.1 PFAM: OsmC family protein; KEGG: pfo:Pfl01_2206 OsmC-like protein; OsmC family protein 4514296 8359786 Cpin_3619 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003123282.1 4513847 D 485918 CDS YP_003123283.1 256422630 8359787 complement(4514539..4515888) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: glo:Glov_1166 two component, sigma54 specific, transcriptional regulator, Fis family; Fis family transcriptional regulator 4515888 8359787 Cpin_3620 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003123283.1 4514539 R 485918 CDS YP_003123284.1 256422631 8359788 4516011..4516664 1 NC_013132.1 hypothetical protein 4516664 8359788 Cpin_3621 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123284.1 4516011 D 485918 CDS YP_003123285.1 256422632 8359789 4517124..4532060 1 NC_013132.1 TIGRFAM: conserved repeat domain protein; outer membrane adhesin like protein; SMART: cadherin; KEGG: vsp:VS_II0856 hypothetical protein; hypothetical protein 4532060 8359789 Cpin_3622 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123285.1 4517124 D 485918 CDS YP_003123286.1 256422633 8359790 4532026..4549263 1 NC_013132.1 TIGRFAM: outer membrane adhesin like protein; conserved repeat domain protein; SMART: cadherin; KEGG: vsp:VS_II0856 hypothetical protein; outer membrane adhesin-like protein 4549263 8359790 Cpin_3623 Chitinophaga pinensis DSM 2588 outer membrane adhesin-like protein YP_003123286.1 4532026 D 485918 CDS YP_003123287.1 256422634 8359791 4549266..4550192 1 NC_013132.1 hypothetical protein 4550192 8359791 Cpin_3624 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123287.1 4549266 D 485918 CDS YP_003123288.1 256422635 8359792 4550204..4551619 1 NC_013132.1 PFAM: hypothetical protein; KEGG: sml:Smlt2618 beta propeller repeat protein; hypothetical protein 4551619 8359792 Cpin_3625 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123288.1 4550204 D 485918 CDS YP_003123289.1 256422636 8359793 4551708..4552925 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: cps:CPS_1821 acyltransferase family protein; acyltransferase 3 4552925 8359793 Cpin_3626 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003123289.1 4551708 D 485918 CDS YP_003123290.1 256422637 8359794 4552947..4554035 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: azc:AZC_1300 two-component sensor histidine kinase; signal transduction histidine kinase LytS 4554035 8359794 Cpin_3627 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003123290.1 4552947 D 485918 CDS YP_003123291.1 256422638 8359795 4554007..4554714 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 4554714 8359795 Cpin_3628 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003123291.1 4554007 D 485918 CDS YP_003123292.1 256422639 8359796 complement(4554715..4556169) 1 NC_013132.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bha:BH1491 protease; peptidase S8/S53 subtilisin kexin sedolisin 4556169 8359796 Cpin_3629 Chitinophaga pinensis DSM 2588 peptidase S8/S53 subtilisin kexin sedolisin YP_003123292.1 4554715 R 485918 CDS YP_003123293.1 256422640 8359797 4556394..4557593 1 NC_013132.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: abc:ACICU_03606 G3E family GTPase; cobalamin synthesis protein P47K 4557593 8359797 Cpin_3630 Chitinophaga pinensis DSM 2588 cobalamin synthesis protein P47K YP_003123293.1 4556394 D 485918 CDS YP_003123294.1 256422641 8359798 4557730..4558335 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: ret:RHE_PF00422 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 4558335 8359798 Cpin_3631 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003123294.1 4557730 D 485918 CDS YP_003123295.1 256422642 8359799 4558351..4559316 1 NC_013132.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR; anti-FecI sigma factor FecR 4559316 8359799 Cpin_3632 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003123295.1 4558351 D 485918 CDS YP_003123296.1 256422643 8359800 4559334..4562852 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 4562852 8359800 Cpin_3633 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123296.1 4559334 D 485918 CDS YP_003123297.1 256422644 8359801 4562878..4564410 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 4564410 8359801 Cpin_3634 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003123297.1 4562878 D 485918 CDS YP_003123298.1 256422645 8359802 4564486..4566210 1 NC_013132.1 PFAM: peptidase S15; KEGG: sml:Smlt2275 esterase/peptidase; peptidase S15 4566210 8359802 Cpin_3635 Chitinophaga pinensis DSM 2588 peptidase S15 YP_003123298.1 4564486 D 485918 CDS YP_003123299.1 256422646 8359803 complement(4566328..4566459) 1 NC_013132.1 hypothetical protein 4566459 8359803 Cpin_3636 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123299.1 4566328 R 485918 CDS YP_003123300.1 256422647 8359804 4566601..4567203 1 NC_013132.1 PFAM: scramblase; KEGG: dal:Dalk_1120 scramblase family protein; scramblase 4567203 8359804 Cpin_3637 Chitinophaga pinensis DSM 2588 scramblase YP_003123300.1 4566601 D 485918 CDS YP_003123301.1 256422648 8359805 4567212..4567325 1 NC_013132.1 hypothetical protein 4567325 8359805 Cpin_3638 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123301.1 4567212 D 485918 CDS YP_003123302.1 256422649 8359806 4567360..4567956 1 NC_013132.1 PFAM: CheB methylesterase; KEGG: scl:sce4190 hypothetical protein; CheB methylesterase 4567956 8359806 Cpin_3639 Chitinophaga pinensis DSM 2588 CheB methylesterase YP_003123302.1 4567360 D 485918 CDS YP_003123303.1 256422650 8359807 4568042..4571953 1 NC_013132.1 KEGG: eba:ebA2146 regulator protein; TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; PAC repeat- containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein; CheR-typeMCP methyltransferase with PAS/PAC sensor 4571953 8359807 Cpin_3640 Chitinophaga pinensis DSM 2588 CheR-typeMCP methyltransferase with PAS/PAC sensor YP_003123303.1 4568042 D 485918 CDS YP_003123304.1 256422651 8359808 4572196..4572657 1 NC_013132.1 hypothetical protein 4572657 8359808 Cpin_3641 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123304.1 4572196 D 485918 CDS YP_003123305.1 256422652 8359809 complement(4572825..4573391) 1 NC_013132.1 hypothetical protein 4573391 8359809 Cpin_3642 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123305.1 4572825 R 485918 CDS YP_003123306.1 256422653 8359810 4573815..4577075 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 4577075 8359810 Cpin_3643 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003123306.1 4573815 D 485918 CDS YP_003123307.1 256422654 8359811 4577088..4578935 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 4578935 8359811 Cpin_3644 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003123307.1 4577088 D 485918 CDS YP_003123308.1 256422655 8359812 complement(4579141..4580274) 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: reh:H16_B2518 NADH-dependent flavin oxidoreductase YqiG; NADH:flavin oxidoreductase 4580274 8359812 Cpin_3645 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003123308.1 4579141 R 485918 CDS YP_003123309.1 256422656 8359813 complement(4580358..4580960) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: sde:Sde_3995 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 4580960 8359813 Cpin_3646 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123309.1 4580358 R 485918 CDS YP_003123310.1 256422657 8359814 4581133..4582437 1 NC_013132.1 KEGG: noc:Noc_2145 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase 4582437 8359814 Cpin_3647 Chitinophaga pinensis DSM 2588 L-sorbosone dehydrogenase YP_003123310.1 4581133 D 485918 CDS YP_003123311.1 256422658 8359815 4582439..4582882 1 NC_013132.1 PFAM: cytochrome C class I; KEGG: rso:RS03038 major anaerobically induced outer membrane transmembrane protein; cytochrome C class I 4582882 8359815 Cpin_3648 Chitinophaga pinensis DSM 2588 cytochrome C class I YP_003123311.1 4582439 D 485918 CDS YP_003123312.1 256422659 8359816 4583002..4583937 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bsu:BSU02160 hypothetical protein; MarR family transcriptional regulator 4583937 8359816 Cpin_3649 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003123312.1 4583002 D 485918 CDS YP_003123313.1 256422660 8359817 complement(4584032..4584169) 1 NC_013132.1 hypothetical protein 4584169 8359817 Cpin_3650 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123313.1 4584032 R 485918 CDS YP_003123314.1 256422661 8359818 4584420..4586261 1 NC_013132.1 PFAM: glycoside hydrolase family 76; SMART: beta and gamma crystallin; KEGG: cja:CJA_0276 carbohydrate binding protein, , cbp6B; glycoside hydrolase 4586261 8359818 Cpin_3651 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123314.1 4584420 D 485918 CDS YP_003123315.1 256422662 8359819 4586487..4587629 1 NC_013132.1 KEGG: mxa:MXAN_0010 CapA family protein; poly-gamma-glutamate biosynthesis protein 4587629 8359819 Cpin_3652 Chitinophaga pinensis DSM 2588 poly-gamma-glutamate biosynthesis protein YP_003123315.1 4586487 D 485918 CDS YP_003123316.1 256422663 8359820 4587644..4588342 1 NC_013132.1 PFAM: NLP/P60 protein; KEGG: sun:SUN_0450 hypothetical protein; NLP/P60 protein 4588342 8359820 Cpin_3653 Chitinophaga pinensis DSM 2588 NLP/P60 protein YP_003123316.1 4587644 D 485918 CDS YP_003123317.1 256422664 8359821 4588637..4590274 1 NC_013132.1 PFAM: carboxyl transferase; KEGG: aba:Acid345_1428 propionyl-CoA carboxylase; methylcrotonoyl-CoA carboxylase 4590274 8359821 Cpin_3654 Chitinophaga pinensis DSM 2588 methylcrotonoyl-CoA carboxylase YP_003123317.1 4588637 D 485918 CDS YP_003123318.1 256422665 8359822 4590308..4590763 1 NC_013132.1 PFAM: ribonuclease H; KEGG: dvu:DVU0689 ribonuclease HI; ribonuclease H 4590763 8359822 Cpin_3655 Chitinophaga pinensis DSM 2588 ribonuclease H YP_003123318.1 4590308 D 485918 CDS YP_003123319.1 256422666 8359823 4590966..4591508 1 NC_013132.1 PFAM: YceI family protein; KEGG: YceI family protein; hypothetical protein 4591508 8359823 Cpin_3656 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123319.1 4590966 D 485918 CDS YP_003123320.1 256422667 8359824 4591545..4592567 1 NC_013132.1 PFAM: Luciferase-like monooxygenase; KEGG: sus:Acid_4376 luciferase family protein; luciferase-like monooxygenase 4592567 8359824 Cpin_3657 Chitinophaga pinensis DSM 2588 luciferase-like monooxygenase YP_003123320.1 4591545 D 485918 CDS YP_003123321.1 256422668 8359825 complement(4592611..4595022) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 4595022 8359825 Cpin_3658 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123321.1 4592611 R 485918 CDS YP_003123322.1 256422669 8359826 4595207..4595845 1 NC_013132.1 PFAM: lipid-binding START domain protein; SMART: lipid-binding START domain protein; KEGG: xac:XAC0537 hypothetical protein; lipid-binding START domain-containing protein 4595845 8359826 Cpin_3659 Chitinophaga pinensis DSM 2588 lipid-binding START domain-containing protein YP_003123322.1 4595207 D 485918 CDS YP_003123323.1 256422670 8359827 complement(4595958..4596449) 1 NC_013132.1 hypothetical protein 4596449 8359827 Cpin_3660 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123323.1 4595958 R 485918 CDS YP_003123324.1 256422671 8359828 complement(4596564..4597685) 1 NC_013132.1 hypothetical protein 4597685 8359828 Cpin_3661 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123324.1 4596564 R 485918 CDS YP_003123325.1 256422672 8359829 complement(4597757..4598893) 1 NC_013132.1 hypothetical protein 4598893 8359829 Cpin_3662 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123325.1 4597757 R 485918 CDS YP_003123326.1 256422673 8359830 complement(4598912..4599349) 1 NC_013132.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: SsrA-binding protein; K03664 SsrA-binding protein; SsrA-binding protein 4599349 8359830 Cpin_3663 Chitinophaga pinensis DSM 2588 SsrA-binding protein YP_003123326.1 4598912 R 485918 CDS YP_003123327.1 256422674 8359831 complement(4599655..4600503) 1 NC_013132.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: pca:Pcar_0737 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 4600503 8359831 Cpin_3664 Chitinophaga pinensis DSM 2588 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_003123327.1 4599655 R 485918 CDS YP_003123328.1 256422675 8359832 complement(4600713..4601780) 1 NC_013132.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 4601780 8359832 Cpin_3665 Chitinophaga pinensis DSM 2588 fructose-bisphosphate aldolase YP_003123328.1 4600713 R 485918 CDS YP_003123329.1 256422676 8359833 complement(4601911..4602726) 1 NC_013132.1 PFAM: periplasmic binding protein; KEGG: tmz:Tmz1t_0726 periplasmic binding protein; periplasmic binding protein 4602726 8359833 Cpin_3666 Chitinophaga pinensis DSM 2588 periplasmic binding protein YP_003123329.1 4601911 R 485918 CDS YP_003123330.1 256422677 8359834 complement(4602726..4604216) 1 NC_013132.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: ade:Adeh_3706 cystathionine beta-synthase; pyridoxal-5'-phosphate-dependent protein subunit beta 4604216 8359834 Cpin_3667 Chitinophaga pinensis DSM 2588 pyridoxal-5'-phosphate-dependent protein subunit beta YP_003123330.1 4602726 R 485918 CDS YP_003123331.1 256422678 8359835 4604555..4605187 1 NC_013132.1 TIGRFAM: dethiobiotin synthase; KEGG: rpe:RPE_3401 dithiobiotin synthetase; dethiobiotin synthase 4605187 8359835 Cpin_3668 Chitinophaga pinensis DSM 2588 dethiobiotin synthase YP_003123331.1 4604555 D 485918 CDS YP_003123332.1 256422679 8359836 4605193..4605774 1 NC_013132.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: nha:Nham_3528 5-formyltetrahydrofolate cyclo- ligase; 5-formyltetrahydrofolate cyclo-ligase 4605774 8359836 Cpin_3669 Chitinophaga pinensis DSM 2588 5-formyltetrahydrofolate cyclo-ligase YP_003123332.1 4605193 D 485918 CDS YP_003123333.1 256422680 8359837 4605776..4606843 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 4606843 8359837 Cpin_3670 Chitinophaga pinensis DSM 2588 tetraacyldisaccharide 4'-kinase YP_003123333.1 4605776 D 485918 CDS YP_003123334.1 256422681 8359838 4606855..4608972 1 NC_013132.1 KEGG: bcy:Bcer98_3673 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; SMART: RNA binding S1 domain protein; Cold shock protein; ribonuclease R 4608972 8359838 Cpin_3671 Chitinophaga pinensis DSM 2588 ribonuclease R YP_003123334.1 4606855 D 485918 CDS YP_003123335.1 256422682 8359839 4609009..4609980 1 NC_013132.1 PFAM: polyprenyl synthetase; KEGG: sfu:Sfum_1417 polyprenyl synthetase; polyprenyl synthetase 4609980 8359839 Cpin_3672 Chitinophaga pinensis DSM 2588 polyprenyl synthetase YP_003123335.1 4609009 D 485918 CDS YP_003123336.1 256422683 8359840 complement(4610016..4610393) 1 NC_013132.1 KEGG: gur:Gura_1699 hypothetical protein; hypothetical protein 4610393 8359840 Cpin_3673 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123336.1 4610016 R 485918 CDS YP_003123337.1 256422684 8359841 4610578..4612227 1 NC_013132.1 PFAM: amino acid permease-associated region; KEGG: bph:Bphy_0096 amino acid permease-associated region; amino acid permease-associated protein 4612227 8359841 Cpin_3674 Chitinophaga pinensis DSM 2588 amino acid permease-associated protein YP_003123337.1 4610578 D 485918 CDS YP_003123338.1 256422685 8359842 4612334..4612771 1 NC_013132.1 PFAM: DoxX family protein; KEGG: hypothetical protein; DoxX family protein 4612771 8359842 Cpin_3675 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003123338.1 4612334 D 485918 CDS YP_003123339.1 256422686 8359843 4613106..4614149 1 NC_013132.1 KEGG: dds:Ddes_1087 Smr protein/MutS2; hypothetical protein 4614149 8359843 Cpin_3676 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123339.1 4613106 D 485918 CDS YP_003123340.1 256422687 8359845 4614648..4615061 1 NC_013132.1 KEGG: swd:Swoo_4796 hypothetical protein; hypothetical protein 4615061 8359845 Cpin_3677 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123340.1 4614648 D 485918 CDS YP_003123341.1 256422688 8359846 complement(4615173..4616873) 1 NC_013132.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein; peptidase S8/S53 subtilisin kexin sedolisin 4616873 8359846 Cpin_3678 Chitinophaga pinensis DSM 2588 peptidase S8/S53 subtilisin kexin sedolisin YP_003123341.1 4615173 R 485918 CDS YP_003123342.1 256422689 8359847 4616938..4617081 1 NC_013132.1 hypothetical protein 4617081 8359847 Cpin_3679 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123342.1 4616938 D 485918 CDS YP_003123343.1 256422690 8359848 4617124..4617294 1 NC_013132.1 hypothetical protein 4617294 8359848 Cpin_3680 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123343.1 4617124 D 485918 CDS YP_003123344.1 256422691 8359849 complement(4617632..4619161) 1 NC_013132.1 PFAM: aldehyde dehydrogenase; KEGG: dps:DP2332 piperideine-6-carboxylate dehydrogenase; aldehyde dehydrogenase 4619161 8359849 Cpin_3681 Chitinophaga pinensis DSM 2588 aldehyde dehydrogenase YP_003123344.1 4617632 R 485918 CDS YP_003123345.1 256422692 8359850 complement(4619277..4620161) 1 NC_013132.1 KEGG: Os10g0463800; hypothetical protein; hypothetical protein 4620161 8359850 Cpin_3682 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123345.1 4619277 R 485918 CDS YP_003123346.1 256422693 8359851 complement(4620171..4620986) 1 NC_013132.1 KEGG: sat:SYN_02773 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4620986 8359851 Cpin_3683 Chitinophaga pinensis DSM 2588 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_003123346.1 4620171 R 485918 CDS YP_003123347.1 256422694 8359852 complement(4621043..4621924) 1 NC_013132.1 PFAM: Ppx/GppA phosphatase; KEGG: mgm:Mmc1_0350 Ppx/GppA phosphatase; Ppx/GppA phosphatase 4621924 8359852 Cpin_3684 Chitinophaga pinensis DSM 2588 Ppx/GppA phosphatase YP_003123347.1 4621043 R 485918 CDS YP_003123348.1 256422695 8359853 complement(4622136..4624292) 1 NC_013132.1 PFAM: polyphosphate kinase; KEGG: vpa:VP0573 polyphosphate kinase; polyphosphate kinase 4624292 8359853 Cpin_3685 Chitinophaga pinensis DSM 2588 polyphosphate kinase YP_003123348.1 4622136 R 485918 CDS YP_003123349.1 256422696 8359854 complement(4625137..4626375) 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 4626375 8359854 Cpin_3686 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003123349.1 4625137 R 485918 CDS YP_003123350.1 256422697 8359855 complement(4626467..4627492) 1 NC_013132.1 KEGG: afw:Anae109_1984 hypothetical protein; hypothetical protein 4627492 8359855 Cpin_3687 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123350.1 4626467 R 485918 CDS YP_003123351.1 256422698 8359856 complement(4627521..4627865) 1 NC_013132.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 4627865 8359856 Cpin_3688 Chitinophaga pinensis DSM 2588 aspartate alpha-decarboxylase YP_003123351.1 4627521 R 485918 CDS YP_003123352.1 256422699 8359857 complement(4628002..4628859) 1 NC_013132.1 KEGG: vfm:VFMJ11_2284 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase 4628859 8359857 Cpin_3689 Chitinophaga pinensis DSM 2588 pantoate--beta-alanine ligase YP_003123352.1 4628002 R 485918 CDS YP_003123353.1 256422700 8359858 4628969..4629787 1 NC_013132.1 PFAM: starch synthase catalytic domain protein; KEGG: ppr:PBPRB0406 glycogen synthase; starch synthase 4629787 8359858 Cpin_3690 Chitinophaga pinensis DSM 2588 starch synthase YP_003123353.1 4628969 D 485918 CDS YP_003123354.1 256422701 8359859 4629970..4631223 1 NC_013132.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4631223 8359859 Cpin_3691 Chitinophaga pinensis DSM 2588 S-adenosylmethionine synthetase YP_003123354.1 4629970 D 485918 CDS YP_003123355.1 256422702 8359860 4631504..4631992 1 NC_013132.1 hypothetical protein 4631992 8359860 Cpin_3692 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123355.1 4631504 D 485918 CDS YP_003123356.1 256422703 8359861 4631999..4632574 1 NC_013132.1 hypothetical protein 4632574 8359861 Cpin_3693 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123356.1 4631999 D 485918 CDS YP_003123357.1 256422704 8359862 complement(4632656..4634356) 1 NC_013132.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: pzu:PHZ_c2153 choline dehydrogenase; glucose-methanol-choline oxidoreductase 4634356 8359862 Cpin_3694 Chitinophaga pinensis DSM 2588 glucose-methanol-choline oxidoreductase YP_003123357.1 4632656 R 485918 CDS YP_003123358.1 256422705 8359863 complement(4634404..4634985) 1 NC_013132.1 KEGG: cak:Caul_4605 hypothetical protein; hypothetical protein 4634985 8359863 Cpin_3695 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123358.1 4634404 R 485918 CDS YP_003123359.1 256422706 8359864 complement(4634982..4635767) 1 NC_013132.1 KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase; peptidase-like protein 4635767 8359864 Cpin_3696 Chitinophaga pinensis DSM 2588 peptidase-like protein YP_003123359.1 4634982 R 485918 CDS YP_003123360.1 256422707 8359865 complement(4635768..4636928) 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: aba:Acid345_0070 acyltransferase 3; acyltransferase 3 4636928 8359865 Cpin_3697 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003123360.1 4635768 R 485918 CDS YP_003123361.1 256422708 8359866 complement(4636928..4638607) 1 NC_013132.1 KEGG: bbt:BBta_7186 hypothetical protein; hypothetical protein 4638607 8359866 Cpin_3698 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123361.1 4636928 R 485918 CDS YP_003123362.1 256422709 8359867 complement(4638623..4639351) 1 NC_013132.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 4639351 8359867 Cpin_3699 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003123362.1 4638623 R 485918 CDS YP_003123363.1 256422710 8359868 complement(4639358..4640800) 1 NC_013132.1 KEGG: dol:Dole_1436 O-antigen polymerase; hypothetical protein 4640800 8359868 Cpin_3700 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123363.1 4639358 R 485918 CDS YP_003123364.1 256422711 8359869 complement(4640815..4640931) 1 NC_013132.1 hypothetical protein 4640931 8359869 Cpin_3701 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123364.1 4640815 R 485918 CDS YP_003123365.1 256422712 8359870 complement(4640935..4642017) 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: vvu:VV2_1626 hypothetical protein; acyltransferase 3 4642017 8359870 Cpin_3702 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003123365.1 4640935 R 485918 CDS YP_003123366.1 256422713 8359871 complement(4642036..4644225) 1 NC_013132.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: pat:Patl_1073 protein-tyrosine kinase; lipopolysaccharide biosynthesis protein 4644225 8359871 Cpin_3703 Chitinophaga pinensis DSM 2588 lipopolysaccharide biosynthesis protein YP_003123366.1 4642036 R 485918 CDS YP_003123367.1 256422714 8359872 complement(4644307..4651311) 1 NC_013132.1 PFAM: PA14 domain protein; fibronectin type III domain protein; Ig family protein; SMART: PA14 domain protein; fibronectin type III domain protein; LamG domain protein jellyroll fold domain protein; KEGG: sbm:Shew185_0166 outer membrane adhesin like protein; PA14 domain-containing protein 4651311 8359872 Cpin_3704 Chitinophaga pinensis DSM 2588 PA14 domain-containing protein YP_003123367.1 4644307 R 485918 CDS YP_003123368.1 256422715 8359873 complement(4651683..4652873) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: cps:CPS_5020 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 4652873 8359873 Cpin_3705 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003123368.1 4651683 R 485918 CDS YP_003123369.1 256422716 8359874 4653314..4653745 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cheY1; chemotaxis two-component response regulator protein; K03413 two-component system, chemotaxis family, response regulator CheY; response regulator receiver protein 4653745 8359874 Cpin_3706 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003123369.1 4653314 D 485918 CDS YP_003123370.1 256422717 8359875 4653798..4654955 1 NC_013132.1 PFAM: sugar transferase; KEGG: swd:Swoo_1694 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; UDP-phosphate galactose phosphotransferase 4654955 8359875 Cpin_3707 Chitinophaga pinensis DSM 2588 UDP-phosphate galactose phosphotransferase YP_003123370.1 4653798 D 485918 CDS YP_003123371.1 256422718 8359876 4654955..4656166 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: bcy:Bcer98_1099 glycosyl transferase family protein; family 2 glycosyl transferase 4656166 8359876 Cpin_3708 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003123371.1 4654955 D 485918 CDS YP_003123372.1 256422719 8359877 4656150..4657073 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_2884 glycosyl transferase family protein; family 2 glycosyl transferase 4657073 8359877 Cpin_3709 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003123372.1 4656150 D 485918 CDS YP_003123373.1 256422720 8359878 4657061..4658962 1 NC_013132.1 KEGG: abu:Abu_0678 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; asparagine synthase 4658962 8359878 Cpin_3710 Chitinophaga pinensis DSM 2588 asparagine synthase YP_003123373.1 4657061 D 485918 CDS YP_003123374.1 256422721 8359879 4658967..4660097 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: dar:Daro_1276 glycosyl transferase, group 1; group 1 glycosyl transferase 4660097 8359879 Cpin_3711 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003123374.1 4658967 D 485918 CDS YP_003123375.1 256422722 8359880 4660116..4660850 1 NC_013132.1 PFAM: methyltransferase type 11; KEGG: gbm:Gbem_1618 methyltransferase type 11; type 11 methyltransferase 4660850 8359880 Cpin_3712 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003123375.1 4660116 D 485918 CDS YP_003123376.1 256422723 8359881 complement(4660944..4662281) 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein; KEGG: ppr:PBPRA2684 hypothetical protein; polysaccharide biosynthesis protein 4662281 8359881 Cpin_3713 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein YP_003123376.1 4660944 R 485918 CDS YP_003123377.1 256422724 8359882 4662791..4668106 1 NC_013132.1 PFAM: PKD domain containing protein; phospholipase/carboxylesterase; two component regulator three Y domain protein; SMART: PKD domain containing protein; Parallel beta- helix repeat; KEGG: gur:Gura_2254 PKD domain-containing protein; PKD domain-containing protein 4668106 8359882 Cpin_3714 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003123377.1 4662791 D 485918 CDS YP_003123378.1 256422725 8359883 complement(4668245..4668874) 1 NC_013132.1 KEGG: attR; transacetylase; acetyltransferase (isoleucine patch superfamily)-like protein 4668874 8359883 Cpin_3715 Chitinophaga pinensis DSM 2588 acetyltransferase (isoleucine patch superfamily)-like protein YP_003123378.1 4668245 R 485918 CDS YP_003123379.1 256422726 8359884 complement(4668879..4670081) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: pfl:PFL_2028 glycosyl transferase, group 2 family protein; group 1 glycosyl transferase 4670081 8359884 Cpin_3716 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003123379.1 4668879 R 485918 CDS YP_003123380.1 256422727 8359885 4670216..4671751 1 NC_013132.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N- acetyltransferase; KEGG: fph:Fphi_0696 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 4671751 8359885 Cpin_3717 Chitinophaga pinensis DSM 2588 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003123380.1 4670216 D 485918 CDS YP_003123381.1 256422728 8359886 4671766..4672059 1 NC_013132.1 PFAM: protein of unknown function DUF77; KEGG: bar:GBAA0380 hypothetical protein; hypothetical protein 4672059 8359886 Cpin_3718 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123381.1 4671766 D 485918 CDS YP_003123382.1 256422729 8359887 complement(4672063..4673355) 1 NC_013132.1 KEGG: bbt:BBta_6676 glycosyl transferase; hypothetical protein 4673355 8359887 Cpin_3719 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123382.1 4672063 R 485918 CDS YP_003123383.1 256422730 8359888 complement(4673401..4674651) 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: afw:Anae109_3197 hypothetical protein; hypothetical protein 4674651 8359888 Cpin_3720 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123383.1 4673401 R 485918 CDS YP_003123384.1 256422731 8359889 complement(4674726..4675985) 1 NC_013132.1 PFAM: nucleoside recognition domain protein; KEGG: lch:Lcho_3694 nucleoside recognition domain- containing protein; nucleoside recognition domain-containing protein 4675985 8359889 Cpin_3721 Chitinophaga pinensis DSM 2588 nucleoside recognition domain-containing protein YP_003123384.1 4674726 R 485918 CDS YP_003123385.1 256422732 8359890 4676108..4677211 1 NC_013132.1 TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related; KEGG: GTP-binding protein YchF; K06942; GTP-binding protein YchF 4677211 8359890 Cpin_3722 Chitinophaga pinensis DSM 2588 GTP-binding protein YchF YP_003123385.1 4676108 D 485918 CDS YP_003123386.1 256422733 8359891 complement(4677288..4678301) 1 NC_013132.1 PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO6511 phosphotransferase family protein; aminoglycoside phosphotransferase 4678301 8359891 Cpin_3723 Chitinophaga pinensis DSM 2588 aminoglycoside phosphotransferase YP_003123386.1 4677288 R 485918 CDS YP_003123387.1 256422734 8359892 4678347..4679714 1 NC_013132.1 hypothetical protein 4679714 8359892 Cpin_3724 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123387.1 4678347 D 485918 CDS YP_003123388.1 256422735 8359893 complement(4679786..4682542) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: amc:MADE_03676 TonB-dependent receptor; TonB-dependent receptor 4682542 8359893 Cpin_3725 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003123388.1 4679786 R 485918 CDS YP_003123389.1 256422736 8359894 complement(4682726..4685848) 1 NC_013132.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: nmu:Nmul_A1639 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump 4685848 8359894 Cpin_3726 Chitinophaga pinensis DSM 2588 CzcA family heavy metal efflux pump YP_003123389.1 4682726 R 485918 CDS YP_003123390.1 256422737 8359895 complement(4685863..4686942) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_3837 secretion protein HlyD; RND family efflux transporter MFP subunit 4686942 8359895 Cpin_3727 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003123390.1 4685863 R 485918 CDS YP_003123391.1 256422738 8359896 complement(4686958..4688259) 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: mca:MCA2110 outer membrane efflux protein; outer membrane efflux protein 4688259 8359896 Cpin_3728 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003123391.1 4686958 R 485918 CDS YP_003123392.1 256422739 8359897 complement(4688401..4688841) 1 NC_013132.1 hypothetical protein 4688841 8359897 Cpin_3729 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123392.1 4688401 R 485918 CDS YP_003123393.1 256422740 8359898 complement(4689341..4690381) 1 NC_013132.1 KEGG: ade:Adeh_1400 homoserine dehydrogenase / homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase; homoserine O-acetyltransferase 4690381 8359898 Cpin_3730 Chitinophaga pinensis DSM 2588 homoserine O-acetyltransferase YP_003123393.1 4689341 R 485918 CDS YP_003123394.1 256422741 8359899 4690483..4690902 1 NC_013132.1 PFAM: OsmC family protein; KEGG: abo:ABO_2022 hypothetical protein; OsmC family protein 4690902 8359899 Cpin_3731 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003123394.1 4690483 D 485918 CDS YP_003123395.1 256422742 8359900 4690937..4692118 1 NC_013132.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mfa:Mfla_1691 O-succinylhomoserine sulfhydrylase; cystathionine gamma-synthase 4692118 8359900 Cpin_3732 Chitinophaga pinensis DSM 2588 cystathionine gamma-synthase YP_003123395.1 4690937 D 485918 CDS YP_003123396.1 256422743 8359901 4692320..4692685 1 NC_013132.1 hypothetical protein 4692685 8359901 Cpin_3733 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123396.1 4692320 D 485918 CDS YP_003123397.1 256422744 8359902 4692811..4695360 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 4695360 8359902 Cpin_3734 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123397.1 4692811 D 485918 CDS YP_003123398.1 256422745 8359903 4695768..4695974 1 NC_013132.1 hypothetical protein 4695974 8359903 Cpin_3735 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123398.1 4695768 D 485918 CDS YP_003123399.1 256422746 8359904 4696169..4697209 1 NC_013132.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: spe:Spro_1886 hypothetical protein; rhodanese domain-containing protein 4697209 8359904 Cpin_3736 Chitinophaga pinensis DSM 2588 rhodanese domain-containing protein YP_003123399.1 4696169 D 485918 CDS YP_003123400.1 256422747 8359905 complement(4697451..4698116) 1 NC_013132.1 KEGG: noc:Noc_1536 secretion protein HlyD; hypothetical protein 4698116 8359905 Cpin_3737 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123400.1 4697451 R 485918 CDS YP_003123401.1 256422748 8359906 complement(4698214..4699617) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sus:Acid_5478 integral membrane sensor signal transduction histidine kinase; histidine kinase 4699617 8359906 Cpin_3738 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123401.1 4698214 R 485918 CDS YP_003123402.1 256422749 8359907 complement(4699614..4700414) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: two component heavy metal response transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR; winged helix family two component transcriptional regulator 4700414 8359907 Cpin_3739 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003123402.1 4699614 R 485918 CDS YP_003123403.1 256422750 8359908 complement(4700515..4702518) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_2008 ABC transporter, ATPase subunit; ABC transporter 4702518 8359908 Cpin_3740 Chitinophaga pinensis DSM 2588 ABC transporter YP_003123403.1 4700515 R 485918 CDS YP_003123404.1 256422751 8359909 4702633..4703196 1 NC_013132.1 hypothetical protein 4703196 8359909 Cpin_3741 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123404.1 4702633 D 485918 CDS YP_003123405.1 256422752 8359910 4703352..4705292 1 NC_013132.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 4705292 thrS 8359910 thrS Chitinophaga pinensis DSM 2588 threonyl-tRNA synthetase YP_003123405.1 4703352 D 485918 CDS YP_003123406.1 256422753 8359911 4705500..4706219 1 NC_013132.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: sus:Acid_1422 translation initiation factor 3; translation initiation factor IF-3 4706219 8359911 Cpin_3743 Chitinophaga pinensis DSM 2588 translation initiation factor IF-3 YP_003123406.1 4705500 D 485918 CDS YP_003123407.1 256422754 8359912 4706411..4706815 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pat:Patl_0424 response regulator receiver protein; response regulator receiver protein 4706815 8359912 Cpin_3744 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003123407.1 4706411 D 485918 CDS YP_003123408.1 256422755 8359913 4706823..4709855 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: pol:Bpro_3898 multi-sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 4709855 8359913 Cpin_3745 Chitinophaga pinensis DSM 2588 response regulator receiver sensor signal transduction histidine kinase YP_003123408.1 4706823 D 485918 CDS YP_003123409.1 256422756 8359914 complement(4709936..4711246) 1 NC_013132.1 hypothetical protein 4711246 8359914 Cpin_3746 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123409.1 4709936 R 485918 CDS YP_003123410.1 256422757 8359915 complement(4711257..4712105) 1 NC_013132.1 hypothetical protein 4712105 8359915 Cpin_3747 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123410.1 4711257 R 485918 CDS YP_003123411.1 256422758 8359916 complement(4712127..4713581) 1 NC_013132.1 hypothetical protein 4713581 8359916 Cpin_3748 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123411.1 4712127 R 485918 CDS YP_003123412.1 256422759 8359917 complement(4713600..4717007) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 4717007 8359917 Cpin_3749 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123412.1 4713600 R 485918 CDS YP_003123413.1 256422760 8359918 4717163..4718143 1 NC_013132.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bba:Bd0368 cation efflux system protein; cation diffusion facilitator family transporter 4718143 8359918 Cpin_3750 Chitinophaga pinensis DSM 2588 cation diffusion facilitator family transporter YP_003123413.1 4717163 D 485918 CDS YP_003123414.1 256422761 8359919 complement(4718144..4719331) 1 NC_013132.1 PFAM: beta-lactamase; KEGG: bsu:BSU34440 penicillin-binding protein 4*; beta-lactamase 4719331 8359919 Cpin_3751 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003123414.1 4718144 R 485918 CDS YP_003123415.1 256422762 8359920 4719635..4720873 1 NC_013132.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: sde:Sde_3388 D-3-phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 4720873 8359920 Cpin_3752 Chitinophaga pinensis DSM 2588 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_003123415.1 4719635 D 485918 CDS YP_003123416.1 256422763 8359921 complement(4721211..4723130) 1 NC_013132.1 PFAM: carbohydrate-binding protein; SMART: cellulose binding type IV; KEGG: aba:Acid345_2907 40-residue YVTN beta- propeller repeat protein; carbohydrate-binding protein 4723130 8359921 Cpin_3753 Chitinophaga pinensis DSM 2588 carbohydrate-binding protein YP_003123416.1 4721211 R 485918 CDS YP_003123417.1 256422764 8359922 complement(4723532..4723876) 1 NC_013132.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: sal:Sala_2939 50S ribosomal protein L20; 50S ribosomal protein L20 4723876 8359922 Cpin_3754 Chitinophaga pinensis DSM 2588 50S ribosomal protein L20 YP_003123417.1 4723532 R 485918 CDS YP_003123418.1 256422765 8359923 complement(4723932..4724129) 1 NC_013132.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: dps:DP1426 50S ribosomal protein L35; 50S ribosomal protein L35 4724129 8359923 Cpin_3755 Chitinophaga pinensis DSM 2588 50S ribosomal protein L35 YP_003123418.1 4723932 R 485918 CDS YP_003123419.1 256422766 8359924 4724568..4736783 1 NC_013132.1 KEGG: rso:RS05070 hemagglutinin/hemolysin- related protein; hypothetical protein 4736783 8359924 Cpin_3756 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123419.1 4724568 D 485918 CDS YP_003123420.1 256422767 8359925 complement(4737127..4737948) 1 NC_013132.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 4737948 8359925 Cpin_3757 Chitinophaga pinensis DSM 2588 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_003123420.1 4737127 R 485918 CDS YP_003123421.1 256422768 8359926 complement(4738015..4738617) 1 NC_013132.1 PFAM: protein of unknown function DUF151; KEGG: sus:Acid_6705 hypothetical protein; hypothetical protein 4738617 8359926 Cpin_3758 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123421.1 4738015 R 485918 CDS YP_003123422.1 256422769 8359927 complement(4738723..4739688) 1 NC_013132.1 PFAM: electron transfer flavoprotein subunit alpha; electron transfer flavoprotein alpha/beta-subunit; KEGG: bba:Bd0021 electron transfer flavoprotein subunit alpha; electron transfer flavoprotein subunit alpha 4739688 8359927 Cpin_3759 Chitinophaga pinensis DSM 2588 electron transfer flavoprotein subunit alpha YP_003123422.1 4738723 R 485918 CDS YP_003123423.1 256422770 8359928 complement(4739741..4740481) 1 NC_013132.1 PFAM: electron transfer flavoprotein alpha/beta- subunit; KEGG: bat:BAS4419 electron transfer flavoprotein, beta subunit; electron transfer flavoprotein alpha/beta- subunit 4740481 8359928 Cpin_3760 Chitinophaga pinensis DSM 2588 electron transfer flavoprotein alpha/beta- subunit YP_003123423.1 4739741 R 485918 CDS YP_003123424.1 256422771 8359929 4740533..4740841 1 NC_013132.1 KEGG: sus:Acid_0135 hypothetical protein; hypothetical protein 4740841 8359929 Cpin_3761 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123424.1 4740533 D 485918 CDS YP_003123425.1 256422772 8359930 4740857..4742194 1 NC_013132.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: dol:Dole_0068 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 4742194 8359930 Cpin_3762 Chitinophaga pinensis DSM 2588 tRNA(Ile)-lysidine synthetase YP_003123425.1 4740857 D 485918 CDS YP_003123426.1 256422773 8359931 complement(4742205..4742657) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pat:Patl_0424 response regulator receiver protein; response regulator receiver protein 4742657 8359931 Cpin_3763 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003123426.1 4742205 R 485918 CDS YP_003123427.1 256422774 8359932 complement(4742707..4744323) 1 NC_013132.1 KEGG: sfu:Sfum_2837 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 4744323 8359932 Cpin_3764 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003123427.1 4742707 R 485918 CDS YP_003123428.1 256422775 8359933 complement(4744329..4745360) 1 NC_013132.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: bpy:Bphyt_5776 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 4745360 8359933 Cpin_3765 Chitinophaga pinensis DSM 2588 anti-sigma regulatory factor, serine/threonine protein kinase YP_003123428.1 4744329 R 485918 CDS YP_003123429.1 256422776 8359934 complement(4745345..4745755) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mrd:Mrad2831_5231 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 4745755 8359934 Cpin_3766 Chitinophaga pinensis DSM 2588 anti-sigma regulatory factor, serine/threonine protein kinase YP_003123429.1 4745345 R 485918 CDS YP_003123430.1 256422777 8359935 complement(4745752..4746138) 1 NC_013132.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2415 anti-sigma-factor antagonist; anti-sigma-factor antagonist 4746138 8359935 Cpin_3767 Chitinophaga pinensis DSM 2588 anti-sigma-factor antagonist YP_003123430.1 4745752 R 485918 CDS YP_003123431.1 256422778 8359936 complement(4746150..4747004) 1 NC_013132.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sus:Acid_0527 anti-sigma-factor antagonist; anti-sigma-factor antagonist 4747004 8359936 Cpin_3768 Chitinophaga pinensis DSM 2588 anti-sigma-factor antagonist YP_003123431.1 4746150 R 485918 CDS YP_003123432.1 256422779 8359937 complement(4747089..4747700) 1 NC_013132.1 PFAM: rhomboid family protein; KEGG: xac:XAC1451 hypothetical protein; rhomboid family protein 4747700 8359937 Cpin_3769 Chitinophaga pinensis DSM 2588 rhomboid family protein YP_003123432.1 4747089 R 485918 CDS YP_003123433.1 256422780 8359938 complement(4747747..4748220) 1 NC_013132.1 PFAM: protein of unknown function DUF163; KEGG: bha:BH4007 SPOUT methyltransferase superfamily protein; hypothetical protein 4748220 8359938 Cpin_3770 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123433.1 4747747 R 485918 CDS YP_003123434.1 256422781 8359940 complement(4748538..4749164) 1 NC_013132.1 KEGG: jan:Jann_0393 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4749164 8359940 Cpin_3771 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003123434.1 4748538 R 485918 CDS YP_003123435.1 256422782 8359941 complement(4749182..4749976) 1 NC_013132.1 PFAM: inositol monophosphatase; KEGG: similar to GA14281-PA; inositol monophosphatase 4749976 8359941 Cpin_3772 Chitinophaga pinensis DSM 2588 inositol monophosphatase YP_003123435.1 4749182 R 485918 CDS YP_003123436.1 256422783 8359942 complement(4750060..4750917) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: azo:azo2447 PobR regulator; AraC family transcriptional regulator 4750917 8359942 Cpin_3773 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123436.1 4750060 R 485918 CDS YP_003123437.1 256422784 8359943 4751115..4752164 1 NC_013132.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: esa:ESA_02984 hypothetical protein; AraC family transcriptional regulator 4752164 8359943 Cpin_3774 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123437.1 4751115 D 485918 CDS YP_003123438.1 256422785 8359944 4752279..4752746 1 NC_013132.1 KEGG: scl:sce0333 hypothetical protein; hypothetical protein 4752746 8359944 Cpin_3775 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123438.1 4752279 D 485918 CDS YP_003123439.1 256422786 8359945 4752756..4753082 1 NC_013132.1 KEGG: bha:BH3318 hypothetical protein; hypothetical protein 4753082 8359945 Cpin_3776 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123439.1 4752756 D 485918 CDS YP_003123440.1 256422787 8359946 4753083..4755218 1 NC_013132.1 PFAM: cytochrome C oxidase subunit I; KEGG: rfr:Rfer_4127 cytochrome C oxidase, subunit I; cytochrome C oxidase 4755218 8359946 Cpin_3777 Chitinophaga pinensis DSM 2588 cytochrome C oxidase YP_003123440.1 4753083 D 485918 CDS YP_003123441.1 256422788 8359947 4755224..4756219 1 NC_013132.1 PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome C class I; KEGG: pol:Bpro_1266 cytochrome C oxidase, mono-heme subunit/FixO; cytochrome C oxidase mono-heme subunit/FixO 4756219 8359947 Cpin_3778 Chitinophaga pinensis DSM 2588 cytochrome C oxidase mono-heme subunit/FixO YP_003123441.1 4755224 D 485918 CDS YP_003123442.1 256422789 8359948 4756230..4756487 1 NC_013132.1 hypothetical protein 4756487 8359948 Cpin_3779 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123442.1 4756230 D 485918 CDS YP_003123443.1 256422790 8359949 4756492..4756902 1 NC_013132.1 KEGG: mxa:MXAN_7466 hypothetical protein; hypothetical protein 4756902 8359949 Cpin_3780 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123443.1 4756492 D 485918 CDS YP_003123444.1 256422791 8359950 4757083..4760247 1 NC_013132.1 TIGRFAM: cytochrome C biogenesis protein CcsB; PFAM: cytochrome C assembly protein; KEGG: nis:NIS_1187 CcmF/CcyK/CcsA family cytochrome C biogenesis protein; cytochrome C biogenesis protein CcsB 4760247 8359950 Cpin_3781 Chitinophaga pinensis DSM 2588 cytochrome C biogenesis protein CcsB YP_003123444.1 4757083 D 485918 CDS YP_003123445.1 256422792 8359951 4760259..4760735 1 NC_013132.1 KEGG: pst:PSPTO_3078 hypothetical protein; hypothetical protein 4760735 8359951 Cpin_3782 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123445.1 4760259 D 485918 CDS YP_003123446.1 256422793 8359952 4760867..4761421 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: tcx:Tcr_1301 TetR family transcriptional regulator; TetR family transcriptional regulator 4761421 8359952 Cpin_3783 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003123446.1 4760867 D 485918 CDS YP_003123447.1 256422794 8359953 4761453..4762295 1 NC_013132.1 PFAM: protein of unknown function DUF303 acetylesterase KEGG: sus:Acid_5941 protein of unknown function DUF303, acetylesterase; hypothetical protein 4762295 8359953 Cpin_3784 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123447.1 4761453 D 485918 CDS YP_003123448.1 256422795 8359955 complement(4762587..4763390) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: gur:Gura_4373 2,5-didehydrogluconate reductase; aldehyde reductase 4763390 8359955 Cpin_3785 Chitinophaga pinensis DSM 2588 aldehyde reductase YP_003123448.1 4762587 R 485918 CDS YP_003123449.1 256422796 8359956 complement(4763411..4764394) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: sus:Acid_2909 aldo/keto reductase; aldo/keto reductase 4764394 8359956 Cpin_3786 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003123449.1 4763411 R 485918 CDS YP_003123450.1 256422797 8359957 4764545..4765441 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 4765441 8359957 Cpin_3787 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123450.1 4764545 D 485918 CDS YP_003123451.1 256422798 8359958 4765572..4766132 1 NC_013132.1 hypothetical protein 4766132 8359958 Cpin_3788 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123451.1 4765572 D 485918 CDS YP_003123452.1 256422799 8359959 4766798..4767853 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: aba:Acid345_3488 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase LytS 4767853 8359959 Cpin_3789 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003123452.1 4766798 D 485918 CDS YP_003123453.1 256422800 8359960 4767867..4768589 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 4768589 8359960 Cpin_3790 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003123453.1 4767867 D 485918 CDS YP_003123454.1 256422801 8359961 4768777..4769256 1 NC_013132.1 PFAM: cupin; KEGG: sus:Acid_5678 cupin 2 domain-containing protein; cupin 4769256 8359961 Cpin_3791 Chitinophaga pinensis DSM 2588 cupin YP_003123454.1 4768777 D 485918 CDS YP_003123455.1 256422802 8359962 complement(4769395..4769772) 1 NC_013132.1 PFAM: carbohydrate-binding protein; SMART: carbohydrate-binding protein; KEGG: hch:HCH_05453 chitinase; carbohydrate-binding protein 4769772 8359962 Cpin_3792 Chitinophaga pinensis DSM 2588 carbohydrate-binding protein YP_003123455.1 4769395 R 485918 CDS YP_003123456.1 256422803 8359963 4770033..4770197 1 NC_013132.1 KEGG: gbm:Gbem_0165 hypothetical protein; hypothetical protein 4770197 8359963 Cpin_3793 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123456.1 4770033 D 485918 CDS YP_003123457.1 256422804 8359965 complement(4770439..4772310) 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein; glycoside hydrolase 4772310 8359965 Cpin_3794 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123457.1 4770439 R 485918 CDS YP_003123458.1 256422805 8359966 complement(4772357..4772911) 1 NC_013132.1 KEGG: bcj:BCAM2090 hypothetical protein; hypothetical protein 4772911 8359966 Cpin_3795 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123458.1 4772357 R 485918 CDS YP_003123459.1 256422806 8359967 4773486..4774676 1 NC_013132.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 4774676 8359967 Cpin_3796 Chitinophaga pinensis DSM 2588 4-hydroxybenzoate 3-monooxygenase YP_003123459.1 4773486 D 485918 CDS YP_003123460.1 256422807 8359968 4774814..4775695 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll2336 transcriptional regulatory protein; AraC family transcriptional regulator 4775695 8359968 Cpin_3797 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123460.1 4774814 D 485918 CDS YP_003123461.1 256422808 8359969 complement(4775981..4776826) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1910 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4776826 8359969 Cpin_3798 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123461.1 4775981 R 485918 CDS YP_003123462.1 256422809 8359970 4776901..4777149 1 NC_013132.1 hypothetical protein 4777149 8359970 Cpin_3799 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123462.1 4776901 D 485918 CDS YP_003123463.1 256422810 8359971 4777167..4778402 1 NC_013132.1 hypothetical protein 4778402 8359971 Cpin_3800 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123463.1 4777167 D 485918 CDS YP_003123464.1 256422811 8359972 complement(4778414..4779775) 1 NC_013132.1 PFAM: sulfatase; KEGG: ent:Ent638_1506 sulfatase; sulfatase 4779775 8359972 Cpin_3801 Chitinophaga pinensis DSM 2588 sulfatase YP_003123464.1 4778414 R 485918 CDS YP_003123465.1 256422812 8359973 complement(4779892..4781262) 1 NC_013132.1 hypothetical protein 4781262 8359973 Cpin_3802 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123465.1 4779892 R 485918 CDS YP_003123466.1 256422813 8359975 complement(4781689..4782522) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: ade:Adeh_3206 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4782522 8359975 Cpin_3803 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123466.1 4781689 R 485918 CDS YP_003123467.1 256422814 8359976 complement(4782596..4783501) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 4783501 8359976 Cpin_3804 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123467.1 4782596 R 485918 CDS YP_003123468.1 256422815 8359977 complement(4783662..4786067) 1 NC_013132.1 PFAM: glycoside hydrolase family 18; carbohydrate-binding protein; coagulation factor 5/8 type domain protein; SMART: cellulose binding type IV; coagulation factor 5/8 type domain protein; chitinase II; KEGG: sde:Sde_0475 beta-glucosidase-related glycosidases-like; glycoside hydrolase 4786067 8359977 Cpin_3805 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123468.1 4783662 R 485918 CDS YP_003123469.1 256422816 8359978 complement(4786767..4787885) 1 NC_013132.1 PFAM: FecR protein; KEGG: pfl:PFL_4040 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 4787885 8359978 Cpin_3806 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003123469.1 4786767 R 485918 CDS YP_003123470.1 256422817 8359979 complement(4787939..4788472) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: ret:RHE_PC00138 RNA polymerase sigma-E factor; ECF subfamily RNA polymerase sigma-24 subunit 4788472 8359979 Cpin_3807 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003123470.1 4787939 R 485918 CDS YP_003123471.1 256422818 8359980 4789024..4792407 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 4792407 8359980 Cpin_3808 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123471.1 4789024 D 485918 CDS YP_003123472.1 256422819 8359981 4792419..4793828 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 4793828 8359981 Cpin_3809 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003123472.1 4792419 D 485918 CDS YP_003123473.1 256422820 8359982 complement(4794148..4794399) 1 NC_013132.1 hypothetical protein 4794399 8359982 Cpin_3810 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123473.1 4794148 R 485918 CDS YP_003123474.1 256422821 8359983 complement(4794599..4795051) 1 NC_013132.1 KEGG: bcy:Bcer98_0322 hypothetical protein; hypothetical protein 4795051 8359983 Cpin_3811 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123474.1 4794599 R 485918 CDS YP_003123475.1 256422822 8359984 4795422..4796264 1 NC_013132.1 KEGG: sse:Ssed_3274 lipoprotein; lipoprotein 4796264 8359984 Cpin_3812 Chitinophaga pinensis DSM 2588 lipoprotein YP_003123475.1 4795422 D 485918 CDS YP_003123476.1 256422823 8359985 complement(4796352..4797791) 1 NC_013132.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1115 proton-translocating NADH- quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N 4797791 8359985 Cpin_3813 Chitinophaga pinensis DSM 2588 proton-translocating NADH-quinone oxidoreductase subunit N YP_003123476.1 4796352 R 485918 CDS YP_003123477.1 256422824 8359986 complement(4797784..4799256) 1 NC_013132.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: acr:Acry_1109 proton-translocating NADH- quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit M 4799256 8359986 Cpin_3814 Chitinophaga pinensis DSM 2588 proton-translocating NADH-quinone oxidoreductase subunit M YP_003123477.1 4797784 R 485918 CDS YP_003123478.1 256422825 8359987 complement(4799253..4801109) 1 NC_013132.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: nmu:Nmul_A1023 proton-translocating NADH- quinone oxidoreductase, chain L; proton-translocating NADH-quinone oxidoreductase subunit L 4801109 8359987 Cpin_3815 Chitinophaga pinensis DSM 2588 proton-translocating NADH-quinone oxidoreductase subunit L YP_003123478.1 4799253 R 485918 CDS YP_003123479.1 256422826 8359988 complement(4801113..4801421) 1 NC_013132.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mca:MCA1350 NADH dehydrogenase I, K subunit; NADH-ubiquinone oxidoreductase chain 4L 4801421 8359988 Cpin_3816 Chitinophaga pinensis DSM 2588 NADH-ubiquinone oxidoreductase chain 4L YP_003123479.1 4801113 R 485918 CDS YP_003123480.1 256422827 8359989 complement(4801425..4801943) 1 NC_013132.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: noc:Noc_1119 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 4801943 8359989 Cpin_3817 Chitinophaga pinensis DSM 2588 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_003123480.1 4801425 R 485918 CDS YP_003123481.1 256422828 8359990 complement(4801956..4802471) 1 NC_013132.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nmu:Nmul_A1020 NADH dehydrogenase subunit I; NADH-quinone oxidoreductase subunit I 4802471 8359990 Cpin_3818 Chitinophaga pinensis DSM 2588 NADH-quinone oxidoreductase subunit I YP_003123481.1 4801956 R 485918 CDS YP_003123482.1 256422829 8359991 complement(4802497..4803453) 1 NC_013132.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: noc:Noc_1121 NADH dehydrogenase subunit H; NADH dehydrogenase (quinone) 4803453 8359991 Cpin_3819 Chitinophaga pinensis DSM 2588 NADH dehydrogenase (quinone) YP_003123482.1 4802497 R 485918 CDS YP_003123483.1 256422830 8359992 complement(4803460..4806159) 1 NC_013132.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase Fe4S4 region; ferredoxin; KEGG: noc:Noc_1122 NADH dehydrogenase subunit G; NADH-quinone oxidoreductase subunit G 4806159 8359992 Cpin_3820 Chitinophaga pinensis DSM 2588 NADH-quinone oxidoreductase subunit G YP_003123483.1 4803460 R 485918 CDS YP_003123484.1 256422831 8359993 complement(4806171..4807451) 1 NC_013132.1 KEGG: noc:Noc_1123 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 4807451 8359993 Cpin_3821 Chitinophaga pinensis DSM 2588 NADH-quinone oxidoreductase subunit F YP_003123484.1 4806171 R 485918 CDS YP_003123485.1 256422832 8359994 complement(4807448..4807912) 1 NC_013132.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: noc:Noc_1124 NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH-quinone oxidoreductase subunit E 4807912 8359994 Cpin_3822 Chitinophaga pinensis DSM 2588 NADH-quinone oxidoreductase subunit E YP_003123485.1 4807448 R 485918 CDS YP_003123486.1 256422833 8359995 complement(4807928..4809670) 1 NC_013132.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 4809670 8359995 Cpin_3823 Chitinophaga pinensis DSM 2588 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_003123486.1 4807928 R 485918 CDS YP_003123487.1 256422834 8359996 complement(4809878..4810516) 1 NC_013132.1 KEGG: noc:Noc_1126 NADH dehydrogenase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 4810516 8359996 Cpin_3824 Chitinophaga pinensis DSM 2588 NADH-quinone oxidoreductase subunit B YP_003123487.1 4809878 R 485918 CDS YP_003123488.1 256422835 8359997 complement(4810488..4810934) 1 NC_013132.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: nmu:Nmul_A1013 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 4810934 8359997 Cpin_3825 Chitinophaga pinensis DSM 2588 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_003123488.1 4810488 R 485918 CDS YP_003123489.1 256422836 8359998 complement(4811065..4811427) 1 NC_013132.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: pna:Pnap_1409 signal-transduction protein with CBS domains; signal transduction protein with CBS domains 4811427 8359998 Cpin_3826 Chitinophaga pinensis DSM 2588 signal transduction protein with CBS domains YP_003123489.1 4811065 R 485918 CDS YP_003123490.1 256422837 8359999 4811695..4812759 1 NC_013132.1 PFAM: integrase family protein; KEGG: bcz:BCZK4231 integrase/recombinase; integrase family protein 4812759 8359999 Cpin_3827 Chitinophaga pinensis DSM 2588 integrase family protein YP_003123490.1 4811695 D 485918 CDS YP_003123491.1 256422838 8360000 complement(4812740..4813015) 1 NC_013132.1 hypothetical protein 4813015 8360000 Cpin_3828 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123491.1 4812740 R 485918 CDS YP_003123492.1 256422839 8360001 complement(4813019..4813258) 1 NC_013132.1 KEGG: kpn:KPN_01400 hypothetical protein; hypothetical protein 4813258 8360001 Cpin_3829 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123492.1 4813019 R 485918 CDS YP_003123493.1 256422840 8360002 complement(4813323..4813580) 1 NC_013132.1 hypothetical protein 4813580 8360002 Cpin_3830 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123493.1 4813323 R 485918 CDS YP_003123494.1 256422841 8360003 complement(4813616..4814266) 1 NC_013132.1 KEGG: bbr:BB2188 hypothetical protein; hypothetical protein 4814266 8360003 Cpin_3831 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123494.1 4813616 R 485918 CDS YP_003123495.1 256422842 8360004 complement(4814967..4815245) 1 NC_013132.1 hypothetical protein 4815245 8360004 Cpin_3832 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123495.1 4814967 R 485918 CDS YP_003123496.1 256422843 8360005 complement(4815229..4815441) 1 NC_013132.1 hypothetical protein 4815441 8360005 Cpin_3833 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123496.1 4815229 R 485918 CDS YP_003123497.1 256422844 8360006 complement(4815658..4816326) 1 NC_013132.1 KEGG: hac:Hac_0361 hypothetical protein; hypothetical protein 4816326 8360006 Cpin_3834 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123497.1 4815658 R 485918 CDS YP_003123498.1 256422845 8360007 complement(4816323..4816583) 1 NC_013132.1 hypothetical protein 4816583 8360007 Cpin_3835 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123498.1 4816323 R 485918 CDS YP_003123499.1 256422846 8360008 complement(4816576..4816800) 1 NC_013132.1 hypothetical protein 4816800 8360008 Cpin_3836 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123499.1 4816576 R 485918 CDS YP_003123500.1 256422847 8360009 complement(4817087..4817278) 1 NC_013132.1 hypothetical protein 4817278 8360009 Cpin_3837 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123500.1 4817087 R 485918 CDS YP_003123501.1 256422848 8360010 complement(4817317..4817445) 1 NC_013132.1 hypothetical protein 4817445 8360010 Cpin_3838 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123501.1 4817317 R 485918 CDS YP_003123502.1 256422849 8360011 complement(4817457..4817687) 1 NC_013132.1 hypothetical protein 4817687 8360011 Cpin_3839 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123502.1 4817457 R 485918 CDS YP_003123503.1 256422850 8360012 complement(4817684..4817995) 1 NC_013132.1 hypothetical protein 4817995 8360012 Cpin_3840 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123503.1 4817684 R 485918 CDS YP_003123504.1 256422851 8360013 complement(4817992..4818177) 1 NC_013132.1 hypothetical protein 4818177 8360013 Cpin_3841 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123504.1 4817992 R 485918 CDS YP_003123505.1 256422852 8360014 complement(4818174..4818617) 1 NC_013132.1 KEGG: nha:Nham_0305 hypothetical protein; hypothetical protein 4818617 8360014 Cpin_3842 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123505.1 4818174 R 485918 CDS YP_003123506.1 256422853 8360015 complement(4818652..4818930) 1 NC_013132.1 hypothetical protein 4818930 8360015 Cpin_3843 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123506.1 4818652 R 485918 CDS YP_003123507.1 256422854 8360016 complement(4818927..4819211) 1 NC_013132.1 hypothetical protein 4819211 8360016 Cpin_3844 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123507.1 4818927 R 485918 CDS YP_003123508.1 256422855 8360017 complement(4819201..4819623) 1 NC_013132.1 hypothetical protein 4819623 8360017 Cpin_3845 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123508.1 4819201 R 485918 CDS YP_003123509.1 256422856 8360018 complement(4819620..4819973) 1 NC_013132.1 hypothetical protein 4819973 8360018 Cpin_3846 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123509.1 4819620 R 485918 CDS YP_003123510.1 256422857 8360019 complement(4820017..4820745) 1 NC_013132.1 hypothetical protein 4820745 8360019 Cpin_3847 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123510.1 4820017 R 485918 CDS YP_003123511.1 256422858 8360020 complement(4820748..4821179) 1 NC_013132.1 KEGG: bbr:BB1685 hypothetical protein; hypothetical protein 4821179 8360020 Cpin_3848 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123511.1 4820748 R 485918 CDS YP_003123512.1 256422859 8360021 complement(4821176..4821439) 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bsu:BSU12510 transcriptional regulator; XRE family transcriptional regulator 4821439 8360021 Cpin_3849 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003123512.1 4821176 R 485918 CDS YP_003123513.1 256422860 8360022 complement(4821436..4822191) 1 NC_013132.1 hypothetical protein 4822191 8360022 Cpin_3850 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123513.1 4821436 R 485918 CDS YP_003123514.1 256422861 8360023 complement(4822160..4823017) 1 NC_013132.1 KEGG: dac:Daci_3219 hypothetical protein; hypothetical protein 4823017 8360023 Cpin_3851 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123514.1 4822160 R 485918 CDS YP_003123515.1 256422862 8360024 complement(4823028..4823282) 1 NC_013132.1 KEGG: hsm:HSM_0883 hypothetical protein; hypothetical protein 4823282 8360024 Cpin_3852 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123515.1 4823028 R 485918 CDS YP_003123516.1 256422863 8360025 complement(4823300..4823554) 1 NC_013132.1 hypothetical protein 4823554 8360025 Cpin_3853 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123516.1 4823300 R 485918 CDS YP_003123517.1 256422864 8360026 complement(4823582..4824022) 1 NC_013132.1 hypothetical protein 4824022 8360026 Cpin_3854 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123517.1 4823582 R 485918 CDS YP_003123518.1 256422865 8360027 complement(4824022..4824429) 1 NC_013132.1 hypothetical protein 4824429 8360027 Cpin_3855 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123518.1 4824022 R 485918 CDS YP_003123519.1 256422866 8360028 complement(4824454..4824855) 1 NC_013132.1 hypothetical protein 4824855 8360028 Cpin_3856 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123519.1 4824454 R 485918 CDS YP_003123520.1 256422867 8360029 complement(4824852..4825235) 1 NC_013132.1 KEGG: reu:Reut_A2370 hypothetical protein; hypothetical protein 4825235 8360029 Cpin_3857 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123520.1 4824852 R 485918 CDS YP_003123521.1 256422868 8360030 complement(4825232..4825870) 1 NC_013132.1 KEGG: bbr:BB3535 hypothetical protein; hypothetical protein 4825870 8360030 Cpin_3858 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123521.1 4825232 R 485918 CDS YP_003123522.1 256422869 8360031 complement(4825874..4826482) 1 NC_013132.1 PFAM: ERF family protein; KEGG: sgl:SG0930 hypothetical protein; ERF family protein 4826482 8360031 Cpin_3859 Chitinophaga pinensis DSM 2588 ERF family protein YP_003123522.1 4825874 R 485918 CDS YP_003123523.1 256422870 8360032 complement(4826492..4827349) 1 NC_013132.1 PFAM: pentapeptide repeat containing protein; KEGG: hit:NTHI1489 hypothetical protein; pentapeptide repeat containing protein 4827349 8360032 Cpin_3860 Chitinophaga pinensis DSM 2588 pentapeptide repeat containing protein YP_003123523.1 4826492 R 485918 CDS YP_003123524.1 256422871 8360033 complement(4827433..4827870) 1 NC_013132.1 hypothetical protein 4827870 8360033 Cpin_3861 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123524.1 4827433 R 485918 CDS YP_003123525.1 256422872 8360034 complement(4828385..4828600) 1 NC_013132.1 hypothetical protein 4828600 8360034 Cpin_3862 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123525.1 4828385 R 485918 CDS YP_003123526.1 256422873 8360036 complement(4828996..4829280) 1 NC_013132.1 hypothetical protein 4829280 8360036 Cpin_3863 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123526.1 4828996 R 485918 CDS YP_003123527.1 256422874 8360037 complement(4829415..4829678) 1 NC_013132.1 hypothetical protein 4829678 8360037 Cpin_3864 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123527.1 4829415 R 485918 CDS YP_003123528.1 256422875 8360038 complement(4829680..4829874) 1 NC_013132.1 hypothetical protein 4829874 8360038 Cpin_3865 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123528.1 4829680 R 485918 CDS YP_003123529.1 256422876 8360039 complement(4829871..4830125) 1 NC_013132.1 hypothetical protein 4830125 8360039 Cpin_3866 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123529.1 4829871 R 485918 CDS YP_003123530.1 256422877 8360040 complement(4830122..4830268) 1 NC_013132.1 hypothetical protein 4830268 8360040 Cpin_3867 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123530.1 4830122 R 485918 CDS YP_003123531.1 256422878 8360041 complement(4830357..4830695) 1 NC_013132.1 hypothetical protein 4830695 8360041 Cpin_3868 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123531.1 4830357 R 485918 CDS YP_003123532.1 256422879 8360042 complement(4830832..4830957) 1 NC_013132.1 hypothetical protein 4830957 8360042 Cpin_3869 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123532.1 4830832 R 485918 CDS YP_003123533.1 256422880 8360043 complement(4831018..4831266) 1 NC_013132.1 hypothetical protein 4831266 8360043 Cpin_3870 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123533.1 4831018 R 485918 CDS YP_003123534.1 256422881 8360044 complement(4831302..4831445) 1 NC_013132.1 hypothetical protein 4831445 8360044 Cpin_3871 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123534.1 4831302 R 485918 CDS YP_003123535.1 256422882 8360045 complement(4831458..4831706) 1 NC_013132.1 hypothetical protein 4831706 8360045 Cpin_3872 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123535.1 4831458 R 485918 CDS YP_003123536.1 256422883 8360046 4831899..4832276 1 NC_013132.1 hypothetical protein 4832276 8360046 Cpin_3873 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123536.1 4831899 D 485918 CDS YP_003123537.1 256422884 8360047 4832480..4833010 1 NC_013132.1 hypothetical protein 4833010 8360047 Cpin_3874 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123537.1 4832480 D 485918 CDS YP_003123538.1 256422885 8360048 4833094..4833858 1 NC_013132.1 KEGG: ecy:ECSE_P4-0002 hypothetical protein; hypothetical protein 4833858 8360048 Cpin_3875 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123538.1 4833094 D 485918 CDS YP_003123539.1 256422886 8360049 4833994..4834326 1 NC_013132.1 hypothetical protein 4834326 8360049 Cpin_3876 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123539.1 4833994 D 485918 CDS YP_003123540.1 256422887 8360050 4834395..4834694 1 NC_013132.1 hypothetical protein 4834694 8360050 Cpin_3877 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123540.1 4834395 D 485918 CDS YP_003123541.1 256422888 8360051 4834894..4835538 1 NC_013132.1 hypothetical protein 4835538 8360051 Cpin_3878 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123541.1 4834894 D 485918 CDS YP_003123542.1 256422889 8360052 4835528..4836943 1 NC_013132.1 KEGG: cjr:CJE0577 terminase B protein; hypothetical protein 4836943 8360052 Cpin_3879 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123542.1 4835528 D 485918 CDS YP_003123543.1 256422890 8360053 4836928..4838367 1 NC_013132.1 PFAM: portal protein; KEGG: ech:ECH_0033 HK97 family phage portal protein; portal protein 4838367 8360053 Cpin_3880 Chitinophaga pinensis DSM 2588 portal protein YP_003123543.1 4836928 D 485918 CDS YP_003123544.1 256422891 8360054 4838429..4839913 1 NC_013132.1 KEGG: esa:ESA_03038 hypothetical protein; hypothetical protein 4839913 8360054 Cpin_3881 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123544.1 4838429 D 485918 CDS YP_003123545.1 256422892 8360055 4839916..4840452 1 NC_013132.1 hypothetical protein 4840452 8360055 Cpin_3882 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123545.1 4839916 D 485918 CDS YP_003123546.1 256422893 8360056 4840449..4840832 1 NC_013132.1 KEGG: sed:SeD_A0642 hypothetical protein; hypothetical protein 4840832 8360056 Cpin_3883 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123546.1 4840449 D 485918 CDS YP_003123547.1 256422894 8360057 4840834..4841100 1 NC_013132.1 hypothetical protein 4841100 8360057 Cpin_3884 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123547.1 4840834 D 485918 CDS YP_003123548.1 256422895 8360058 4841097..4841273 1 NC_013132.1 hypothetical protein 4841273 8360058 Cpin_3885 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123548.1 4841097 D 485918 CDS YP_003123549.1 256422896 8360059 4841542..4841751 1 NC_013132.1 hypothetical protein 4841751 8360059 Cpin_3886 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123549.1 4841542 D 485918 CDS YP_003123550.1 256422897 8360060 4841878..4842219 1 NC_013132.1 hypothetical protein 4842219 8360060 Cpin_3887 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123550.1 4841878 D 485918 CDS YP_003123551.1 256422898 8360061 4842216..4842866 1 NC_013132.1 KEGG: hch:HCH_06039 hypothetical protein; hypothetical protein 4842866 8360061 Cpin_3888 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123551.1 4842216 D 485918 CDS YP_003123552.1 256422899 8360062 4843080..4843454 1 NC_013132.1 hypothetical protein 4843454 8360062 Cpin_3889 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123552.1 4843080 D 485918 CDS YP_003123553.1 256422900 8360063 4843451..4844413 1 NC_013132.1 KEGG: mno:Mnod_3544 head morphogenesis protein SPP1 gp7; hypothetical protein 4844413 8360063 Cpin_3890 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123553.1 4843451 D 485918 CDS YP_003123554.1 256422901 8360064 4844538..4845287 1 NC_013132.1 PFAM: peptidase U35 phage prohead HK97; KEGG: pla:Plav_0905 HK97 family phage prohead protease; peptidase U35 phage prohead HK97 4845287 8360064 Cpin_3891 Chitinophaga pinensis DSM 2588 peptidase U35 phage prohead HK97 YP_003123554.1 4844538 D 485918 CDS YP_003123555.1 256422902 8360065 4845292..4846557 1 NC_013132.1 KEGG: nar:Saro_0649 phage major capsid protein, HK97; hypothetical protein 4846557 8360065 Cpin_3892 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123555.1 4845292 D 485918 CDS YP_003123556.1 256422903 8360066 4846621..4846965 1 NC_013132.1 hypothetical protein 4846965 8360066 Cpin_3893 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123556.1 4846621 D 485918 CDS YP_003123557.1 256422904 8360067 4846969..4847499 1 NC_013132.1 KEGG: wol:WD0076 uncharacterized phage protein; hypothetical protein 4847499 8360067 Cpin_3894 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123557.1 4846969 D 485918 CDS YP_003123558.1 256422905 8360068 4847496..4847834 1 NC_013132.1 TIGRFAM: phage head-tail adaptor; PFAM: head-tail adaptor protein; KEGG: hch:HCH_04551 bacteriophage head-tail adaptor; phage head-tail adaptor 4847834 8360068 Cpin_3895 Chitinophaga pinensis DSM 2588 phage head-tail adaptor YP_003123558.1 4847496 D 485918 CDS YP_003123559.1 256422906 8360069 4847834..4848319 1 NC_013132.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: hypothetical protein; phage protein, HK97 gp10 family 4848319 8360069 Cpin_3896 Chitinophaga pinensis DSM 2588 phage protein, HK97 gp10 family YP_003123559.1 4847834 D 485918 CDS YP_003123560.1 256422907 8360070 4848316..4848759 1 NC_013132.1 hypothetical protein 4848759 8360070 Cpin_3897 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123560.1 4848316 D 485918 CDS YP_003123561.1 256422908 8360071 4848762..4849220 1 NC_013132.1 hypothetical protein 4849220 8360071 Cpin_3898 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123561.1 4848762 D 485918 CDS YP_003123562.1 256422909 8360072 4849240..4849659 1 NC_013132.1 hypothetical protein 4849659 8360072 Cpin_3899 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123562.1 4849240 D 485918 CDS YP_003123563.1 256422910 8360073 4849940..4852840 1 NC_013132.1 KEGG: bpm:BURPS1710b_A0463 membrane- anchored cell surface protein; hypothetical protein 4852840 8360073 Cpin_3900 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123563.1 4849940 D 485918 CDS YP_003123564.1 256422911 8360074 4852840..4854792 1 NC_013132.1 hypothetical protein 4854792 8360074 Cpin_3901 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123564.1 4852840 D 485918 CDS YP_003123565.1 256422912 8360075 4854792..4855556 1 NC_013132.1 hypothetical protein 4855556 8360075 Cpin_3902 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123565.1 4854792 D 485918 CDS YP_003123566.1 256422913 8360076 4855553..4856872 1 NC_013132.1 KEGG: xau:Xaut_4480 tail collar domain-containing protein; hypothetical protein 4856872 8360076 Cpin_3903 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123566.1 4855553 D 485918 CDS YP_003123567.1 256422914 8360077 4856875..4857120 1 NC_013132.1 hypothetical protein 4857120 8360077 Cpin_3904 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123567.1 4856875 D 485918 CDS YP_003123568.1 256422915 8360078 4857117..4859897 1 NC_013132.1 SMART: hypothetical protein; KEGG: bpm:BURPS1710b_A0463 membrane- anchored cell surface protein; hypothetical protein 4859897 8360078 Cpin_3905 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123568.1 4857117 D 485918 CDS YP_003123569.1 256422916 8360079 4859881..4860909 1 NC_013132.1 KEGG: bba:Bd2088 hypothetical protein; hypothetical protein 4860909 8360079 Cpin_3906 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123569.1 4859881 D 485918 CDS YP_003123570.1 256422917 8360080 4860931..4861338 1 NC_013132.1 hypothetical protein 4861338 8360080 Cpin_3907 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123570.1 4860931 D 485918 CDS YP_003123571.1 256422918 8360081 4861347..4861646 1 NC_013132.1 hypothetical protein 4861646 8360081 Cpin_3908 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123571.1 4861347 D 485918 CDS YP_003123572.1 256422919 8360082 4861643..4862050 1 NC_013132.1 hypothetical protein 4862050 8360082 Cpin_3909 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123572.1 4861643 D 485918 CDS YP_003123573.1 256422920 8360083 4862043..4862303 1 NC_013132.1 hypothetical protein 4862303 8360083 Cpin_3910 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123573.1 4862043 D 485918 CDS YP_003123574.1 256422921 8360084 4862462..4863322 1 NC_013132.1 KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase; peptidase-like protein 4863322 8360084 Cpin_3911 Chitinophaga pinensis DSM 2588 peptidase-like protein YP_003123574.1 4862462 D 485918 CDS YP_003123575.1 256422922 8360085 4863328..4863849 1 NC_013132.1 hypothetical protein 4863849 8360085 Cpin_3912 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123575.1 4863328 D 485918 CDS YP_003123576.1 256422923 8360086 4863846..4864208 1 NC_013132.1 hypothetical protein 4864208 8360086 Cpin_3913 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123576.1 4863846 D 485918 CDS YP_003123577.1 256422924 8360087 4864208..4865776 1 NC_013132.1 KEGG: bac:BamMC406_5361 filamentous haemagglutinin outer membrane protein; hypothetical protein 4865776 8360087 Cpin_3914 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123577.1 4864208 D 485918 CDS YP_003123578.1 256422925 8360088 4865872..4866180 1 NC_013132.1 hypothetical protein 4866180 8360088 Cpin_3915 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123578.1 4865872 D 485918 CDS YP_003123579.1 256422926 8360089 complement(4866466..4866927) 1 NC_013132.1 KEGG: mca:MCA1928 hypothetical protein; hypothetical protein 4866927 8360089 Cpin_3916 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123579.1 4866466 R 485918 CDS YP_003123580.1 256422927 8360090 4867101..4867400 1 NC_013132.1 hypothetical protein 4867400 8360090 Cpin_3917 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123580.1 4867101 D 485918 CDS YP_003123581.1 256422928 8360091 4867457..4868062 1 NC_013132.1 KEGG: cja:CJA_3688 hypothetical protein; hypothetical protein 4868062 8360091 Cpin_3918 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123581.1 4867457 D 485918 CDS YP_003123582.1 256422929 8360092 complement(4868176..4870263) 1 NC_013132.1 SMART: chitinase II; KEGG: bsu:BSU00160 hypothetical protein; chitinase 4870263 8360092 Cpin_3919 Chitinophaga pinensis DSM 2588 chitinase YP_003123582.1 4868176 R 485918 CDS YP_003123583.1 256422930 8360093 4870565..4871137 1 NC_013132.1 KEGG: sdn:Sden_3009 hypothetical protein; hypothetical protein 4871137 8360093 Cpin_3920 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123583.1 4870565 D 485918 CDS YP_003123584.1 256422931 8360094 4871150..4871959 1 NC_013132.1 KEGG: rde:RD1_4216 hypothetical protein; hypothetical protein 4871959 8360094 Cpin_3921 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123584.1 4871150 D 485918 CDS YP_003123585.1 256422932 8360095 4871978..4873480 1 NC_013132.1 KEGG: ppd:Ppro_0373 hypothetical protein; hypothetical protein 4873480 8360095 Cpin_3922 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123585.1 4871978 D 485918 CDS YP_003123586.1 256422933 8360096 4873529..4873984 1 NC_013132.1 TIGRFAM: conserved hypothetical protein; KEGG: ppd:Ppro_0372 phage tail protein; hypothetical protein 4873984 8360096 Cpin_3923 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123586.1 4873529 D 485918 CDS YP_003123587.1 256422934 8360097 4873991..4874434 1 NC_013132.1 TIGRFAM: conserved hypothetical protein; KEGG: gbm:Gbem_2547 conserved hypothetical phage tail protein; hypothetical protein 4874434 8360097 Cpin_3924 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123587.1 4873991 D 485918 CDS YP_003123588.1 256422935 8360098 4874441..4874611 1 NC_013132.1 hypothetical protein 4874611 8360098 Cpin_3925 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123588.1 4874441 D 485918 CDS YP_003123589.1 256422936 8360099 4874615..4875283 1 NC_013132.1 KEGG: gbm:Gbem_2549 hypothetical protein; hypothetical protein 4875283 8360099 Cpin_3926 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123589.1 4874615 D 485918 CDS YP_003123590.1 256422937 8360100 4875285..4877099 1 NC_013132.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: cja:CJA_3675 rhs element Vgr protein; Rhs element Vgr protein 4877099 8360100 Cpin_3927 Chitinophaga pinensis DSM 2588 Rhs element Vgr protein YP_003123590.1 4875285 D 485918 CDS YP_003123591.1 256422938 8360101 4877110..4877412 1 NC_013132.1 PFAM: PAAR repeat-containing protein; KEGG: dsh:Dshi_2461 PaaR repeat-containing protein; PAAR repeat-containing protein 4877412 8360101 Cpin_3928 Chitinophaga pinensis DSM 2588 PAAR repeat-containing protein YP_003123591.1 4877110 D 485918 CDS YP_003123592.1 256422939 8360102 4877424..4877852 1 NC_013132.1 PFAM: GPW/gp25 family protein; KEGG: rde:RD1_4224 hypothetical protein; GPW/gp25 family protein 4877852 8360102 Cpin_3929 Chitinophaga pinensis DSM 2588 GPW/gp25 family protein YP_003123592.1 4877424 D 485918 CDS YP_003123593.1 256422940 8360103 4877886..4881626 1 NC_013132.1 KEGG: cja:CJA_3678 hypothetical protein; hypothetical protein 4881626 8360103 Cpin_3930 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123593.1 4877886 D 485918 CDS YP_003123594.1 256422941 8360104 4881633..4882421 1 NC_013132.1 KEGG: ppd:Ppro_0365 hypothetical protein; hypothetical protein 4882421 8360104 Cpin_3931 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123594.1 4881633 D 485918 CDS YP_003123595.1 256422942 8360105 4882431..4885196 1 NC_013132.1 KEGG: ppd:Ppro_0364 hypothetical protein; hypothetical protein 4885196 8360105 Cpin_3932 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123595.1 4882431 D 485918 CDS YP_003123596.1 256422943 8360106 4885198..4887726 1 NC_013132.1 KEGG: sdn:Sden_2997 hypothetical protein; hypothetical protein 4887726 8360106 Cpin_3933 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123596.1 4885198 D 485918 CDS YP_003123597.1 256422944 8360107 4887711..4889063 1 NC_013132.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: AAA ATPase central domain protein; ATPase AAA 4889063 8360107 Cpin_3934 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003123597.1 4887711 D 485918 CDS YP_003123598.1 256422945 8360108 4889166..4890770 1 NC_013132.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sat:SYN_00032 cell wall degradation protein; ErfK/YbiS/YcfS/YnhG family protein 4890770 8360108 Cpin_3935 Chitinophaga pinensis DSM 2588 ErfK/YbiS/YcfS/YnhG family protein YP_003123598.1 4889166 D 485918 CDS YP_003123599.1 256422946 8360109 complement(4891122..4891877) 1 NC_013132.1 KEGG: sus:Acid_4900 hypothetical protein; hypothetical protein 4891877 8360109 Cpin_3936 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123599.1 4891122 R 485918 CDS YP_003123600.1 256422947 8360110 complement(4892479..4893528) 1 NC_013132.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: sat:SYN_02393 peptidylarginine deiminase related enzyme; agmatine deiminase 4893528 8360110 Cpin_3937 Chitinophaga pinensis DSM 2588 agmatine deiminase YP_003123600.1 4892479 R 485918 CDS YP_003123601.1 256422948 8360111 complement(4893528..4894403) 1 NC_013132.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sat:SYN_02392 N-carbamoylputrescine amidase; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 4894403 8360111 Cpin_3938 Chitinophaga pinensis DSM 2588 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003123601.1 4893528 R 485918 CDS YP_003123602.1 256422949 8360112 complement(4894461..4896410) 1 NC_013132.1 KEGG: scl:sce4505 hypothetical protein; hypothetical protein 4896410 8360112 Cpin_3939 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123602.1 4894461 R 485918 CDS YP_003123603.1 256422950 8360113 4896852..4897904 1 NC_013132.1 hypothetical protein 4897904 8360113 Cpin_3940 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123603.1 4896852 D 485918 CDS YP_003123604.1 256422951 8360114 4898128..4900140 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vha:VIBHAR_00261 phosphatidylglycerophosphatase; TonB-dependent receptor 4900140 8360114 Cpin_3941 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003123604.1 4898128 D 485918 CDS YP_003123605.1 256422952 8360115 4900143..4901294 1 NC_013132.1 KEGG: gur:Gura_3003 YVTN beta-propeller repeat- containing protein; hypothetical protein 4901294 8360115 Cpin_3942 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123605.1 4900143 D 485918 CDS YP_003123606.1 256422953 8360116 4901309..4902217 1 NC_013132.1 hypothetical protein 4902217 8360116 Cpin_3943 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123606.1 4901309 D 485918 CDS YP_003123607.1 256422954 8360117 4902308..4903477 1 NC_013132.1 PFAM: glycoside hydrolase, family 20, catalytic core; KEGG: gur:Gura_3052 glycoside hydrolase family protein; glycoside hydrolase 4903477 8360117 Cpin_3944 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123607.1 4902308 D 485918 CDS YP_003123608.1 256422955 8360118 4903616..4903819 1 NC_013132.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ftm:FTM_0546 cold shock protein, DNA-binding; cold-shock DNA-binding domain-containing protein 4903819 8360118 Cpin_3945 Chitinophaga pinensis DSM 2588 cold-shock DNA-binding domain-containing protein YP_003123608.1 4903616 D 485918 CDS YP_003123609.1 256422956 8360119 4903996..4905081 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psa:PST_2757 probable FMN oxidoreductase; NADH:flavin oxidoreductase 4905081 8360119 Cpin_3946 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003123609.1 4903996 D 485918 CDS YP_003123610.1 256422957 8360120 complement(4905323..4905769) 1 NC_013132.1 PFAM: protein of unknown function DUF583; KEGG: dvm:DvMF_2825 protein of unknown function DUF583; hypothetical protein 4905769 8360120 Cpin_3947 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123610.1 4905323 R 485918 CDS YP_003123611.1 256422958 8360121 complement(4905771..4906826) 1 NC_013132.1 KEGG: dal:Dalk_4977 hypothetical protein; hypothetical protein 4906826 8360121 Cpin_3948 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123611.1 4905771 R 485918 CDS YP_003123612.1 256422959 8360122 complement(4907336..4908319) 1 NC_013132.1 PFAM: terpene synthase metal-binding domain protein; KEGG: scl:sce8552 terpene cyclase; terpene synthase metal-binding domain-containing protein 4908319 8360122 Cpin_3949 Chitinophaga pinensis DSM 2588 terpene synthase metal-binding domain-containing protein YP_003123612.1 4907336 R 485918 CDS YP_003123613.1 256422960 8360123 complement(4908499..4910268) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: bba:Bd3430 sensory transduction histidine kinase; histidine kinase 4910268 8360123 Cpin_3950 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123613.1 4908499 R 485918 CDS YP_003123614.1 256422961 8360124 complement(4910480..4913182) 1 NC_013132.1 KEGG: xop:PXO_02197 peptidase; aminopeptidase N 4913182 8360124 Cpin_3951 Chitinophaga pinensis DSM 2588 aminopeptidase N YP_003123614.1 4910480 R 485918 CDS YP_003123615.1 256422962 8360125 4913227..4914879 1 NC_013132.1 hypothetical protein 4914879 8360125 Cpin_3952 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123615.1 4913227 D 485918 CDS YP_003123616.1 256422963 8360126 complement(4915010..4916248) 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 4916248 8360126 Cpin_3953 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003123616.1 4915010 R 485918 CDS YP_003123617.1 256422964 8360127 4916529..4917065 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 4917065 8360127 Cpin_3954 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123617.1 4916529 D 485918 CDS YP_003123618.1 256422965 8360128 4917078..4917884 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hch:HCH_02028 short-chain alcohol dehydrogenase-like protein; short-chain dehydrogenase/reductase SDR 4917884 8360128 Cpin_3955 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123618.1 4917078 D 485918 CDS YP_003123619.1 256422966 8360129 4917923..4919164 1 NC_013132.1 PFAM: sodium:dicarboxylate symporter; KEGG: sat:SYN_01421 proton/sodium-glutamate symport protein; sodium:dicarboxylate symporter 4919164 8360129 Cpin_3956 Chitinophaga pinensis DSM 2588 sodium:dicarboxylate symporter YP_003123619.1 4917923 D 485918 CDS YP_003123620.1 256422967 8360130 complement(4919335..4919697) 1 NC_013132.1 PFAM: protein of unknown function DUF1304; KEGG: jan:Jann_1910 hypothetical protein; hypothetical protein 4919697 8360130 Cpin_3957 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123620.1 4919335 R 485918 CDS YP_003123621.1 256422968 8360131 4919753..4921252 1 NC_013132.1 PFAM: OmpA/MotB domain protein; KEGG: pag:PLES_42821 outer membrane protein precursor; OmpA/MotB domain-containing protein 4921252 8360131 Cpin_3958 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003123621.1 4919753 D 485918 CDS YP_003123622.1 256422969 8360132 4921603..4924737 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 4924737 8360132 Cpin_3959 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123622.1 4921603 D 485918 CDS YP_003123623.1 256422970 8360133 4924749..4926173 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 4926173 8360133 Cpin_3960 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123623.1 4924749 D 485918 CDS YP_003123624.1 256422971 8360134 complement(4926361..4927788) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aci:ACIAD3176 sensory transduction histidine kinase; histidine kinase 4927788 8360134 Cpin_3961 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123624.1 4926361 R 485918 CDS YP_003123625.1 256422972 8360135 4927860..4928363 1 NC_013132.1 hypothetical protein 4928363 8360135 Cpin_3962 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123625.1 4927860 D 485918 CDS YP_003123626.1 256422973 8360136 4928457..4928723 1 NC_013132.1 hypothetical protein 4928723 8360136 Cpin_3963 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123626.1 4928457 D 485918 CDS YP_003123627.1 256422974 8360137 4928850..4929722 1 NC_013132.1 TIGRFAM: methyltransferase; PFAM: O-methyltransferase domain protein; KEGG: psb:Psyr_4307 hypothetical protein; methyltransferase 4929722 8360137 Cpin_3964 Chitinophaga pinensis DSM 2588 methyltransferase YP_003123627.1 4928850 D 485918 CDS YP_003123628.1 256422975 8360138 4929795..4930211 1 NC_013132.1 KEGG: cja:CJA_0606 hypothetical protein; hypothetical protein 4930211 8360138 Cpin_3965 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123628.1 4929795 D 485918 CDS YP_003123629.1 256422976 8360139 4930371..4930826 1 NC_013132.1 KEGG: psa:PST_3106 NAD-dependent aldehyde dehydrogenase; NAD-dependent aldehyde dehydrogenase 4930826 8360139 Cpin_3966 Chitinophaga pinensis DSM 2588 NAD-dependent aldehyde dehydrogenase YP_003123629.1 4930371 D 485918 CDS YP_003123630.1 256422977 8360140 complement(4930914..4931279) 1 NC_013132.1 KEGG: kpe:KPK_3085 sensory box histidine kinase/response regulator; Hpt protein 4931279 8360140 Cpin_3967 Chitinophaga pinensis DSM 2588 Hpt protein YP_003123630.1 4930914 R 485918 CDS YP_003123631.1 256422978 8360141 complement(4931294..4932652) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: gbm:Gbem_2805 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator 4932652 8360141 Cpin_3968 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003123631.1 4931294 R 485918 CDS YP_003123632.1 256422979 8360142 complement(4934092..4935264) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: bcy:Bcer98_1259 glycosyl transferase group 1; group 1 glycosyl transferase 4935264 8360142 Cpin_3969 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003123632.1 4934092 R 485918 CDS YP_003123633.1 256422980 8360143 complement(4935377..4935865) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gsu:GSU1891 response regulator; response regulator receiver protein 4935865 8360143 Cpin_3970 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003123633.1 4935377 R 485918 CDS YP_003123634.1 256422981 8360144 complement(4936081..4937415) 1 NC_013132.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: glo:Glov_2618 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 4937415 8360144 Cpin_3971 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003123634.1 4936081 R 485918 CDS YP_003123635.1 256422982 8360145 4937528..4938619 1 NC_013132.1 PFAM: mechanosensitive ion channel MscS; KEGG: xca:xccb100_3431 small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS 4938619 8360145 Cpin_3972 Chitinophaga pinensis DSM 2588 mechanosensitive ion channel protein MscS YP_003123635.1 4937528 D 485918 CDS YP_003123636.1 256422983 8360146 complement(4938610..4938984) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_PC0000785 glyoxalase protein; bleomycin resistance protein 4938984 8360146 Cpin_3973 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003123636.1 4938610 R 485918 CDS YP_003123637.1 256422984 8360147 complement(4939090..4939650) 1 NC_013132.1 hypothetical protein 4939650 8360147 Cpin_3974 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123637.1 4939090 R 485918 CDS YP_003123638.1 256422985 8360148 complement(4939653..4942733) 1 NC_013132.1 PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_4592 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4942733 8360148 Cpin_3975 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003123638.1 4939653 R 485918 CDS YP_003123639.1 256422986 8360149 4943221..4945506 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: aba:Acid345_0514 alpha-1,2-mannosidase; alpha-1,2-mannosidase 4945506 8360149 Cpin_3976 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003123639.1 4943221 D 485918 CDS YP_003123640.1 256422987 8360150 4945900..4947060 1 NC_013132.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR; anti-FecI sigma factor FecR 4947060 8360150 Cpin_3977 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003123640.1 4945900 D 485918 CDS YP_003123641.1 256422988 8360151 complement(4947066..4948679) 1 NC_013132.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: ccv:CCV52592_0578 Na+/H+ antiporter; Na+/H+ antiporter 4948679 8360151 Cpin_3978 Chitinophaga pinensis DSM 2588 Na+/H+ antiporter YP_003123641.1 4947066 R 485918 CDS YP_003123642.1 256422989 8360152 complement(4948723..4949385) 1 NC_013132.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; response regulator receiver; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rpi:Rpic_2943 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4949385 8360152 Cpin_3979 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003123642.1 4948723 R 485918 CDS YP_003123643.1 256422990 8360153 4950222..4951010 1 NC_013132.1 PFAM: lipolytic protein G-D-S-L family; KEGG: aby:ABAYE1272 hypothetical protein; G-D-S-L family lipolytic protein 4951010 8360153 Cpin_3980 Chitinophaga pinensis DSM 2588 G-D-S-L family lipolytic protein YP_003123643.1 4950222 D 485918 CDS YP_003123644.1 256422991 8360154 complement(4951329..4954373) 1 NC_013132.1 PFAM: acriflavin resistance protein; KEGG: pla:Plav_1535 acriflavin resistance protein; acriflavin resistance protein 4954373 8360154 Cpin_3981 Chitinophaga pinensis DSM 2588 acriflavin resistance protein YP_003123644.1 4951329 R 485918 CDS YP_003123645.1 256422992 8360155 complement(4954414..4955484) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: hch:HCH_06589 membrane-fusion protein; RND family efflux transporter MFP subunit 4955484 8360155 Cpin_3982 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003123645.1 4954414 R 485918 CDS YP_003123646.1 256422993 8360156 complement(4955510..4956877) 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_3710 outer membrane efflux protein; outer membrane efflux protein 4956877 8360156 Cpin_3983 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003123646.1 4955510 R 485918 CDS YP_003123647.1 256422994 8360157 complement(4957031..4957633) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: aba:Acid345_4024 transcriptional regulator, TetR family; TetR family transcriptional regulator 4957633 8360157 Cpin_3984 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003123647.1 4957031 R 485918 CDS YP_003123648.1 256422995 8360158 4957732..4958691 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: she:Shewmr4_3104 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4958691 8360158 Cpin_3985 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003123648.1 4957732 D 485918 CDS YP_003123649.1 256422996 8360159 4959025..4960197 1 NC_013132.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: hps:HPSH_00530 cystathionine gamma- synthase/cystathionine beta-lyase; cystathionine gamma-synthase 4960197 8360159 Cpin_3986 Chitinophaga pinensis DSM 2588 cystathionine gamma-synthase YP_003123649.1 4959025 D 485918 CDS YP_003123650.1 256422997 8360160 4960257..4961564 1 NC_013132.1 PFAM: amidohydrolase; amidohydrolase; KEGG: mxa:MXAN_2373 M38 (beta-aspartyl dipeptidase) family protein; amidohydrolase 4961564 8360160 Cpin_3987 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003123650.1 4960257 D 485918 CDS YP_003123651.1 256422998 8360161 4961603..4962904 1 NC_013132.1 PFAM: protein of unknown function DUF218; KEGG: smt:Smal_1483 protein of unknown function DUF218; hypothetical protein 4962904 8360161 Cpin_3988 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123651.1 4961603 D 485918 CDS YP_003123652.1 256422999 8360162 complement(4962849..4964111) 1 NC_013132.1 PFAM: sodium:dicarboxylate symporter; KEGG: sat:SYN_01421 proton/sodium-glutamate symport protein; sodium:dicarboxylate symporter 4964111 8360162 Cpin_3989 Chitinophaga pinensis DSM 2588 sodium:dicarboxylate symporter YP_003123652.1 4962849 R 485918 CDS YP_003123653.1 256423000 8360163 4964882..4965373 1 NC_013132.1 KEGG: glo:Glov_2584 hypothetical protein; hypothetical protein 4965373 8360163 Cpin_3990 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123653.1 4964882 D 485918 CDS YP_003123654.1 256423001 8360164 complement(4965597..4966352) 1 NC_013132.1 hypothetical protein 4966352 8360164 Cpin_3991 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123654.1 4965597 R 485918 CDS YP_003123655.1 256423002 8360165 4966532..4967188 1 NC_013132.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: mxa:MXAN_2697 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase 4967188 8360165 Cpin_3992 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003123655.1 4966532 D 485918 CDS YP_003123656.1 256423003 8360166 4967503..4968207 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: scl:sce2352 hypothetical protein; NUDIX hydrolase 4968207 8360166 Cpin_3993 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003123656.1 4967503 D 485918 CDS YP_003123657.1 256423004 8360167 4968379..4970022 1 NC_013132.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 4970022 8360167 Cpin_3994 Chitinophaga pinensis DSM 2588 ribulokinase YP_003123657.1 4968379 D 485918 CDS YP_003123658.1 256423005 8360168 4970019..4970720 1 NC_013132.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 4970720 araD 8360168 araD Chitinophaga pinensis DSM 2588 L-ribulose-5-phosphate 4-epimerase YP_003123658.1 4970019 D 485918 CDS YP_003123659.1 256423006 8360169 4970751..4972256 1 NC_013132.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 4972256 8360169 Cpin_3996 Chitinophaga pinensis DSM 2588 L-arabinose isomerase YP_003123659.1 4970751 D 485918 CDS YP_003123660.1 256423007 8360170 complement(4973045..4973587) 1 NC_013132.1 PFAM: protein of unknown function DUF1234; KEGG: ajs:Ajs_0030 hypothetical protein; hypothetical protein 4973587 8360170 Cpin_3997 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123660.1 4973045 R 485918 CDS YP_003123661.1 256423008 8360171 complement(4973689..4974615) 1 NC_013132.1 PFAM: domain of unknown function DUF1730; KEGG: maq:Maqu_2775 iron-sulfur cluster binding protein; hypothetical protein 4974615 8360171 Cpin_3998 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123661.1 4973689 R 485918 CDS YP_003123662.1 256423009 8360172 4974715..4976733 1 NC_013132.1 KEGG: aba:Acid345_0540 hypothetical protein; hypothetical protein 4976733 8360172 Cpin_3999 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123662.1 4974715 D 485918 CDS YP_003123663.1 256423010 8360173 4976737..4978665 1 NC_013132.1 PFAM: transglutaminase domain protein; KEGG: aba:Acid345_0539 hypothetical protein; transglutaminase 4978665 8360173 Cpin_4000 Chitinophaga pinensis DSM 2588 transglutaminase YP_003123663.1 4976737 D 485918 CDS YP_003123664.1 256423011 8360174 4978818..4981433 1 NC_013132.1 KEGG: dol:Dole_2696 ATPase; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 4981433 8360174 Cpin_4001 Chitinophaga pinensis DSM 2588 ATP-dependent chaperone ClpB YP_003123664.1 4978818 D 485918 CDS YP_003123665.1 256423012 8360175 4981557..4982120 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein; Crp/Fnr family transcriptional regulator 4982120 8360175 Cpin_4002 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123665.1 4981557 D 485918 CDS YP_003123666.1 256423013 8360176 4982188..4982517 1 NC_013132.1 PFAM: small multidrug resistance protein; KEGG: ccr:CC_3443 SugE protein; small multidrug resistance protein 4982517 8360176 Cpin_4003 Chitinophaga pinensis DSM 2588 small multidrug resistance protein YP_003123666.1 4982188 D 485918 CDS YP_003123667.1 256423014 8360177 4982718..4983197 1 NC_013132.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bba:Bd0085 cytidine/deoxycytidylate deaminase family protein; zinc-binding CMP/dCMP deaminase 4983197 8360177 Cpin_4004 Chitinophaga pinensis DSM 2588 zinc-binding CMP/dCMP deaminase YP_003123667.1 4982718 D 485918 CDS YP_003123668.1 256423015 8360178 complement(4983591..4983773) 1 NC_013132.1 hypothetical protein 4983773 8360178 Cpin_4005 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123668.1 4983591 R 485918 CDS YP_003123669.1 256423016 8360179 complement(4983916..4986126) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: glo:Glov_2954 multi-sensor hybrid histidine kinase; histidine kinase 4986126 8360179 Cpin_4006 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123669.1 4983916 R 485918 CDS YP_003123670.1 256423017 8360180 complement(4986329..4986565) 1 NC_013132.1 KEGG: spe:Spro_3717 acid shock protein precursor; acid shock protein 4986565 8360180 Cpin_4007 Chitinophaga pinensis DSM 2588 acid shock protein YP_003123670.1 4986329 R 485918 CDS YP_003123671.1 256423018 8360181 complement(4986615..4986758) 1 NC_013132.1 hypothetical protein 4986758 8360181 Cpin_4008 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123671.1 4986615 R 485918 CDS YP_003123672.1 256423019 8360182 4986865..4989096 1 NC_013132.1 PFAM: peptidase M28; protease-associated PA domain protein; transferrin receptor domain protein dimerisation region; KEGG: sus:Acid_4582 glutamate carboxypeptidase II; glutamate carboxypeptidase II 4989096 8360182 Cpin_4009 Chitinophaga pinensis DSM 2588 glutamate carboxypeptidase II YP_003123672.1 4986865 D 485918 CDS YP_003123673.1 256423020 8360183 complement(4989359..4990054) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 4990054 8360183 Cpin_4010 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003123673.1 4989359 R 485918 CDS YP_003123674.1 256423021 8360184 4990182..4990547 1 NC_013132.1 hypothetical protein 4990547 8360184 Cpin_4011 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123674.1 4990182 D 485918 CDS YP_003123675.1 256423022 8360185 4990652..4992049 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: mxa:MXAN_6176 outer membrane efflux protein; outer membrane efflux protein 4992049 8360185 Cpin_4012 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003123675.1 4990652 D 485918 CDS YP_003123676.1 256423023 8360186 4992068..4995226 1 NC_013132.1 PFAM: acriflavin resistance protein; KEGG: mxa:MXAN_6177 efflux transporter, AcrB/AcrD/AcrF family, inner membrane component; acriflavin resistance protein 4995226 8360186 Cpin_4013 Chitinophaga pinensis DSM 2588 acriflavin resistance protein YP_003123676.1 4992068 D 485918 CDS YP_003123677.1 256423024 8360187 4995219..4996307 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sus:Acid_5519 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 4996307 8360187 Cpin_4014 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003123677.1 4995219 D 485918 CDS YP_003123678.1 256423025 8360188 4996435..4996629 1 NC_013132.1 hypothetical protein 4996629 8360188 Cpin_4015 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123678.1 4996435 D 485918 CDS YP_003123679.1 256423026 8360190 complement(4997386..4998258) 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: lip:LI0288 PAP2 superfamily protein; PA-phosphatase-like phosphoesterase 4998258 8360190 Cpin_4017 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003123679.1 4997386 R 485918 CDS YP_003123680.1 256423027 8360191 4998486..4999847 1 NC_013132.1 PFAM: chloride channel core; KEGG: ppd:Ppro_0837 Cl-channel, voltage-gated family protein; chloride channel core 4999847 8360191 Cpin_4018 Chitinophaga pinensis DSM 2588 chloride channel core YP_003123680.1 4998486 D 485918 CDS YP_003123681.1 256423028 8360192 4999870..5000823 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: spe:Spro_2613 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 5000823 8360192 Cpin_4019 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003123681.1 4999870 D 485918 CDS YP_003123682.1 256423029 8360193 complement(5001314..5001496) 1 NC_013132.1 hypothetical protein 5001496 8360193 Cpin_4020 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123682.1 5001314 R 485918 CDS YP_003123683.1 256423030 8360194 complement(5001489..5002433) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: eca:ECA3182 oxidoreductase; aldo/keto reductase 5002433 8360194 Cpin_4021 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003123683.1 5001489 R 485918 CDS YP_003123684.1 256423031 8360195 5003031..5005205 1 NC_013132.1 KEGG: mxa:MXAN_1192 alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: glycosyl transferase family 20; trehalose- phosphatase; trehalose-phosphatase 5005205 8360195 Cpin_4022 Chitinophaga pinensis DSM 2588 trehalose-phosphatase YP_003123684.1 5003031 D 485918 CDS YP_003123685.1 256423032 8360196 complement(5005359..5007140) 1 NC_013132.1 PFAM: glycoside hydrolase 15-related; KEGG: sus:Acid_1157 glycoside hydrolase 15-related protein; glycoside hydrolase 15-like protein 5007140 8360196 Cpin_4023 Chitinophaga pinensis DSM 2588 glycoside hydrolase 15-like protein YP_003123685.1 5005359 R 485918 CDS YP_003123686.1 256423033 8360197 5007240..5009690 1 NC_013132.1 hypothetical protein 5009690 8360197 Cpin_4024 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123686.1 5007240 D 485918 CDS YP_003123687.1 256423034 8360198 5009748..5010173 1 NC_013132.1 hypothetical protein 5010173 8360198 Cpin_4025 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123687.1 5009748 D 485918 CDS YP_003123688.1 256423035 8360199 5010244..5011152 1 NC_013132.1 PFAM: ribonuclease BN; KEGG: reu:Reut_B5335 ribonuclease BN; ribonuclease BN 5011152 8360199 Cpin_4026 Chitinophaga pinensis DSM 2588 ribonuclease BN YP_003123688.1 5010244 D 485918 CDS YP_003123689.1 256423036 8360200 complement(5011153..5011395) 1 NC_013132.1 hypothetical protein 5011395 8360200 Cpin_4027 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123689.1 5011153 R 485918 CDS YP_003123690.1 256423037 8360201 5011644..5013842 1 NC_013132.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ilo:IL2328 dipeptidyl aminopeptidase; peptidase S9B dipeptidylpeptidase IV domain-containing protein 5013842 8360201 Cpin_4028 Chitinophaga pinensis DSM 2588 peptidase S9B dipeptidylpeptidase IV domain-containing protein YP_003123690.1 5011644 D 485918 CDS YP_003123691.1 256423038 8360202 5013852..5014232 1 NC_013132.1 hypothetical protein 5014232 8360202 Cpin_4029 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123691.1 5013852 D 485918 CDS YP_003123692.1 256423039 8360203 complement(5014476..5015120) 1 NC_013132.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: sus:Acid_0168 hypothetical protein; hypothetical protein 5015120 8360203 Cpin_4030 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123692.1 5014476 R 485918 CDS YP_003123693.1 256423040 8360204 complement(5015127..5016359) 1 NC_013132.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: oat; ornithine aminotransferase; K00819 ornithine--oxo-acid transaminase; ornithine aminotransferase 5016359 8360204 Cpin_4031 Chitinophaga pinensis DSM 2588 ornithine aminotransferase YP_003123693.1 5015127 R 485918 CDS YP_003123694.1 256423041 8360205 complement(5016628..5016888) 1 NC_013132.1 PFAM: acyl-coA-binding protein ACBP; KEGG: cvi:CV_3117 acyl-CoA-binding protein; acyl-coA-binding protein ACBP 5016888 8360205 Cpin_4032 Chitinophaga pinensis DSM 2588 acyl-coA-binding protein ACBP YP_003123694.1 5016628 R 485918 CDS YP_003123695.1 256423042 8360206 5017019..5018806 1 NC_013132.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 5018806 8360206 Cpin_4033 Chitinophaga pinensis DSM 2588 GTP-binding protein LepA YP_003123695.1 5017019 D 485918 CDS YP_003123696.1 256423043 8360207 complement(5019508..5020104) 1 NC_013132.1 KEGG: bba:Bd1307 hypothetical protein; hypothetical protein 5020104 8360207 Cpin_4034 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123696.1 5019508 R 485918 CDS YP_003123697.1 256423044 8360208 complement(5020140..5021366) 1 NC_013132.1 KEGG: apa:APP7_1446 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase 5021366 8360208 Cpin_4035 Chitinophaga pinensis DSM 2588 mannose-6-phosphate isomerase YP_003123697.1 5020140 R 485918 CDS YP_003123698.1 256423045 8360209 5021442..5021798 1 NC_013132.1 PFAM: protein of unknown function UPF0102; KEGG: gme:Gmet_2864 hypothetical protein; hypothetical protein 5021798 8360209 Cpin_4036 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123698.1 5021442 D 485918 CDS YP_003123699.1 256423046 8360210 complement(5022359..5023699) 1 NC_013132.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 5023699 8360210 Cpin_4037 Chitinophaga pinensis DSM 2588 adenylosuccinate lyase YP_003123699.1 5022359 R 485918 CDS YP_003123700.1 256423047 8360211 5023764..5024504 1 NC_013132.1 PFAM: protein of unknown function DUF178; KEGG: aba:Acid345_3342 protein of unknown function DUF178; hypothetical protein 5024504 8360211 Cpin_4038 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123700.1 5023764 D 485918 CDS YP_003123701.1 256423048 8360212 5024779..5025438 1 NC_013132.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: aba:Acid345_0125 NADP oxidoreductase, coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase 5025438 8360212 Cpin_4039 Chitinophaga pinensis DSM 2588 coenzyme F420-dependent NADP oxidoreductase YP_003123701.1 5024779 D 485918 CDS YP_003123702.1 256423049 8360213 complement(5025559..5027199) 1 NC_013132.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: ccs:CCNA_02281 membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 5027199 8360213 Cpin_4040 Chitinophaga pinensis DSM 2588 peptidase M1 membrane alanine aminopeptidase YP_003123702.1 5025559 R 485918 CDS YP_003123703.1 256423050 8360214 5027338..5028969 1 NC_013132.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_B1961 ABC peptide transporter, periplasmic ligand binding protein; family 5 extracellular solute-binding protein 5028969 8360214 Cpin_4041 Chitinophaga pinensis DSM 2588 family 5 extracellular solute-binding protein YP_003123703.1 5027338 D 485918 CDS YP_003123704.1 256423051 8360215 5029028..5029915 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 5029915 8360215 Cpin_4042 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123704.1 5029028 D 485918 CDS YP_003123705.1 256423052 8360216 5029993..5031015 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2444 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5031015 8360216 Cpin_4043 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123705.1 5029993 D 485918 CDS YP_003123706.1 256423053 8360217 complement(5031377..5032678) 1 NC_013132.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 5032678 8360217 Cpin_4044 Chitinophaga pinensis DSM 2588 tyrosyl-tRNA synthetase YP_003123706.1 5031377 R 485918 CDS YP_003123707.1 256423054 8360219 5034097..5035179 1 NC_013132.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: scl:sce3211 hypothetical protein; cytochrome C peroxidase 5035179 8360219 Cpin_4046 Chitinophaga pinensis DSM 2588 cytochrome C peroxidase YP_003123707.1 5034097 D 485918 CDS YP_003123708.1 256423055 8360220 5035297..5035794 1 NC_013132.1 PFAM: oxidoreductase molybdopterin binding; KEGG: sus:Acid_7253 hypothetical protein; molybdopterin binding oxidoreductase 5035794 8360220 Cpin_4047 Chitinophaga pinensis DSM 2588 molybdopterin binding oxidoreductase YP_003123708.1 5035297 D 485918 CDS YP_003123709.1 256423056 8360221 5035953..5036723 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: scl:sce6078 Fatty acid desaturase; fatty acid desaturase 5036723 8360221 Cpin_4048 Chitinophaga pinensis DSM 2588 fatty acid desaturase YP_003123709.1 5035953 D 485918 CDS YP_003123710.1 256423057 8360222 complement(5036806..5037396) 1 NC_013132.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); KEGG: sun:SUN_1518 HAD family hydrolase; HAD-superfamily hydrolase 5037396 8360222 Cpin_4049 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003123710.1 5036806 R 485918 CDS YP_003123711.1 256423058 8360223 complement(5037393..5038124) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sun:SUN_1519 short chain dehydrogenase; short chain dehydrogenase 5038124 8360223 Cpin_4050 Chitinophaga pinensis DSM 2588 short chain dehydrogenase YP_003123711.1 5037393 R 485918 CDS YP_003123712.1 256423059 8360224 complement(5038159..5039490) 1 NC_013132.1 PFAM: FAD linked oxidase domain protein; KEGG: sun:SUN_1520 oxidoreductase; FAD linked oxidase domain-containing protein 5039490 8360224 Cpin_4051 Chitinophaga pinensis DSM 2588 FAD linked oxidase domain-containing protein YP_003123712.1 5038159 R 485918 CDS YP_003123713.1 256423060 8360225 complement(5039490..5040377) 1 NC_013132.1 PFAM: UbiA prenyltransferase; KEGG: sun:SUN_1522 UbiA prenyltransferase family protein; UbiA prenyltransferase 5040377 8360225 Cpin_4052 Chitinophaga pinensis DSM 2588 UbiA prenyltransferase YP_003123713.1 5039490 R 485918 CDS YP_003123714.1 256423061 8360226 5040468..5042219 1 NC_013132.1 KEGG: pne:Pnec_0344 hypothetical protein; hypothetical protein 5042219 8360226 Cpin_4053 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123714.1 5040468 D 485918 CDS YP_003123715.1 256423062 8360227 5042263..5043192 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mxa:MXAN_6727 hypothetical protein; hypothetical protein 5043192 8360227 Cpin_4054 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123715.1 5042263 D 485918 CDS YP_003123716.1 256423063 8360228 5043223..5044446 1 NC_013132.1 KEGG: rde:RD1_3767 hypothetical protein; hypothetical protein 5044446 8360228 Cpin_4055 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123716.1 5043223 D 485918 CDS YP_003123717.1 256423064 8360229 5045108..5046364 1 NC_013132.1 PFAM: Radical SAM domain protein; KEGG: aci:ACIAD1170 hypothetical protein; radical SAM protein 5046364 8360229 Cpin_4056 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003123717.1 5045108 D 485918 CDS YP_003123718.1 256423065 8360230 5046495..5047265 1 NC_013132.1 KEGG: abm:ABSDF0378 hypothetical protein; hypothetical protein 5047265 8360230 Cpin_4057 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123718.1 5046495 D 485918 CDS YP_003123719.1 256423066 8360231 5047339..5047605 1 NC_013132.1 hypothetical protein 5047605 8360231 Cpin_4058 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123719.1 5047339 D 485918 CDS YP_003123720.1 256423067 8360232 5047572..5047829 1 NC_013132.1 hypothetical protein 5047829 8360232 Cpin_4059 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123720.1 5047572 D 485918 CDS YP_003123721.1 256423068 8360233 complement(5047871..5048569) 1 NC_013132.1 PFAM: endonuclease V; KEGG: sde:Sde_3125 endonuclease V; deoxyribonuclease V 5048569 8360233 Cpin_4060 Chitinophaga pinensis DSM 2588 deoxyribonuclease V YP_003123721.1 5047871 R 485918 CDS YP_003123722.1 256423069 8360234 complement(5048652..5051411) 1 NC_013132.1 KEGG: msl:Msil_0816 hypothetical protein; hypothetical protein 5051411 8360234 Cpin_4061 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123722.1 5048652 R 485918 CDS YP_003123723.1 256423070 8360235 5052061..5053338 1 NC_013132.1 PFAM: sodium/hydrogen exchanger; KEGG: cco:CCC13826_1715 Na+/H+ antiporter; sodium/hydrogen exchanger 5053338 8360235 Cpin_4062 Chitinophaga pinensis DSM 2588 sodium/hydrogen exchanger YP_003123723.1 5052061 D 485918 CDS YP_003123724.1 256423071 8360236 complement(5053320..5054522) 1 NC_013132.1 PFAM: protein of unknown function DUF763; KEGG: sus:Acid_7730 hypothetical protein; hypothetical protein 5054522 8360236 Cpin_4063 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123724.1 5053320 R 485918 CDS YP_003123725.1 256423072 8360237 complement(5054538..5055212) 1 NC_013132.1 PFAM: MgtC/SapB transporter; KEGG: mxa:MXAN_6522 MgtC family protein; MgtC/SapB transporter 5055212 8360237 Cpin_4064 Chitinophaga pinensis DSM 2588 MgtC/SapB transporter YP_003123725.1 5054538 R 485918 CDS YP_003123726.1 256423073 8360238 5055327..5055578 1 NC_013132.1 hypothetical protein 5055578 8360238 Cpin_4065 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123726.1 5055327 D 485918 CDS YP_003123727.1 256423074 8360239 5055681..5055938 1 NC_013132.1 hypothetical protein 5055938 8360239 Cpin_4066 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123727.1 5055681 D 485918 CDS YP_003123728.1 256423075 8360240 5056329..5058119 1 NC_013132.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: mxa:MXAN_1097 efflux ABC transporter, permease/ATP-binding protein; ABC transporter 5058119 8360240 Cpin_4067 Chitinophaga pinensis DSM 2588 ABC transporter YP_003123728.1 5056329 D 485918 CDS YP_003123729.1 256423076 8360241 complement(5058204..5058680) 1 NC_013132.1 PFAM: thioesterase superfamily protein; KEGG: ppr:PBPRB1873 acyl-CoA thioester hydrolase; thioesterase superfamily protein 5058680 8360241 Cpin_4068 Chitinophaga pinensis DSM 2588 thioesterase superfamily protein YP_003123729.1 5058204 R 485918 CDS YP_003123730.1 256423077 8360242 complement(5058707..5061181) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c3264 TonB-dependent receptor; TonB-dependent receptor 5061181 8360242 Cpin_4069 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003123730.1 5058707 R 485918 CDS YP_003123731.1 256423078 8360243 5061266..5062087 1 NC_013132.1 PFAM: protein of unknown function DUF1260; Protein of unknown function DUF695; KEGG: abc:ACICU_02508 cytoplasmic protein; hypothetical protein 5062087 8360243 Cpin_4070 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123731.1 5061266 D 485918 CDS YP_003123732.1 256423079 8360244 5062318..5064240 1 NC_013132.1 KEGG: cja:CJA_2625 hypothetical protein; hypothetical protein 5064240 8360244 Cpin_4071 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123732.1 5062318 D 485918 CDS YP_003123733.1 256423080 8360245 complement(5064226..5066535) 1 NC_013132.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mxa:MXAN_4341 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit 5066535 8360245 Cpin_4072 Chitinophaga pinensis DSM 2588 oxidoreductase alpha (molybdopterin) subunit YP_003123733.1 5064226 R 485918 CDS YP_003123734.1 256423081 8360246 complement(5066595..5067437) 1 NC_013132.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: pub:SAR11_0681 formate dehydrogenase chain D; formate dehydrogenase 5067437 8360246 Cpin_4073 Chitinophaga pinensis DSM 2588 formate dehydrogenase YP_003123734.1 5066595 R 485918 CDS YP_003123735.1 256423082 8360247 complement(5068138..5069004) 1 NC_013132.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: sfu:Sfum_2040 protein of unknown function, zinc metallopeptidase; hypothetical protein 5069004 8360247 Cpin_4074 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123735.1 5068138 R 485918 CDS YP_003123736.1 256423083 8360248 5069131..5071035 1 NC_013132.1 KEGG: sde:Sde_3467 regulatory protein, LuxR; hypothetical protein 5071035 8360248 Cpin_4075 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123736.1 5069131 D 485918 CDS YP_003123737.1 256423084 8360249 complement(5071032..5073035) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; hypothetical protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; KEGG: pha:PSHAa0111 hypothetical protein; histidine kinase 5073035 8360249 Cpin_4076 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123737.1 5071032 R 485918 CDS YP_003123738.1 256423085 8360250 5073277..5073555 1 NC_013132.1 TIGRFAM: conserved hypothetical protein; PFAM: Selenoprotein W-related; KEGG: noc:Noc_1092 SelT/SelW/SelH selenoprotein; hypothetical protein 5073555 8360250 Cpin_4077 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123738.1 5073277 D 485918 CDS YP_003123739.1 256423086 8360251 5073583..5074755 1 NC_013132.1 KEGG: mxa:MXAN_2867 hypothetical protein; outer membrane protein/protective antigen OMA87-like protein 5074755 8360251 Cpin_4078 Chitinophaga pinensis DSM 2588 outer membrane protein/protective antigen OMA87-like protein YP_003123739.1 5073583 D 485918 CDS YP_003123740.1 256423087 8360252 5074828..5075829 1 NC_013132.1 hypothetical protein 5075829 8360252 Cpin_4079 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123740.1 5074828 D 485918 CDS YP_003123741.1 256423088 8360253 complement(5075801..5076361) 1 NC_013132.1 PFAM: NADPH-dependent FMN reductase; KEGG: sus:Acid_3790 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 5076361 8360253 Cpin_4080 Chitinophaga pinensis DSM 2588 NADPH-dependent FMN reductase YP_003123741.1 5075801 R 485918 CDS YP_003123742.1 256423089 8360254 5077851..5078486 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bce:BC2532 methyltransferase; type 11 methyltransferase 5078486 8360254 Cpin_4081 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003123742.1 5077851 D 485918 CDS YP_003123743.1 256423090 8360255 complement(5078661..5079215) 1 NC_013132.1 KEGG: eum:ECUMN_3642 cytoplasmic protein; hypothetical protein 5079215 8360255 Cpin_4082 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123743.1 5078661 R 485918 CDS YP_003123744.1 256423091 8360256 5079284..5079412 1 NC_013132.1 hypothetical protein 5079412 8360256 Cpin_4083 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123744.1 5079284 D 485918 CDS YP_003123745.1 256423092 8360257 complement(5079530..5080264) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 5080264 8360257 Cpin_4084 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003123745.1 5079530 R 485918 CDS YP_003123746.1 256423093 8360258 complement(5080275..5081402) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sde:Sde_3001 DEAD/DEAH box helicase-like; signal transduction histidine kinase LytS 5081402 8360258 Cpin_4085 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003123746.1 5080275 R 485918 CDS YP_003123747.1 256423094 8360259 5081709..5084171 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: ccs:CCNA_00858 TonB-dependent receptor; TonB-dependent receptor plug 5084171 8360259 Cpin_4086 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123747.1 5081709 D 485918 CDS YP_003123748.1 256423095 8360260 complement(5084201..5084887) 1 NC_013132.1 hypothetical protein 5084887 8360260 Cpin_4087 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123748.1 5084201 R 485918 CDS YP_003123749.1 256423096 8360261 complement(5084909..5087452) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5087452 8360261 Cpin_4088 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123749.1 5084909 R 485918 CDS YP_003123750.1 256423097 8360262 complement(5087542..5088234) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: son:SO_4388 DNA-binding response regulator; winged helix family two component transcriptional regulator 5088234 8360262 Cpin_4089 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003123750.1 5087542 R 485918 CDS YP_003123751.1 256423098 8360263 complement(5088221..5089660) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: scl:sce2435 sensor kinase; histidine kinase 5089660 8360263 Cpin_4090 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123751.1 5088221 R 485918 CDS YP_003123752.1 256423099 8360264 5089765..5090220 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_3353 hypothetical protein; hypothetical protein 5090220 8360264 Cpin_4091 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123752.1 5089765 D 485918 CDS YP_003123753.1 256423100 8360265 complement(5090344..5091282) 1 NC_013132.1 PFAM: polysaccharide deacetylase; KEGG: bam:Bamb_1353 polysaccharide deacetylase; polysaccharide deacetylase 5091282 8360265 Cpin_4092 Chitinophaga pinensis DSM 2588 polysaccharide deacetylase YP_003123753.1 5090344 R 485918 CDS YP_003123754.1 256423101 8360266 complement(5091286..5091684) 1 NC_013132.1 PFAM: DoxX family protein; KEGG: bcy:Bcer98_3079 DoxX family protein; DoxX family protein 5091684 8360266 Cpin_4093 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003123754.1 5091286 R 485918 CDS YP_003123755.1 256423102 8360267 5091856..5095074 1 NC_013132.1 KEGG: hch:HCH_03961 DNA binding domain-containing protein; hypothetical protein 5095074 8360267 Cpin_4094 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123755.1 5091856 D 485918 CDS YP_003123756.1 256423103 8360268 5095085..5096743 1 NC_013132.1 PFAM: zinc finger SWIM domain protein; KEGG: hch:HCH_03960 SWIM zinc finger domain- containing protein; zinc finger SWIM domain-containing protein 5096743 8360268 Cpin_4095 Chitinophaga pinensis DSM 2588 zinc finger SWIM domain-containing protein YP_003123756.1 5095085 D 485918 CDS YP_003123757.1 256423104 8360269 5097192..5098703 1 NC_013132.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: hch:HCH_03958 retron-type reverse transcriptase; RNA-directed DNA polymerase 5098703 8360269 Cpin_4096 Chitinophaga pinensis DSM 2588 RNA-directed DNA polymerase YP_003123757.1 5097192 D 485918 CDS YP_003123758.1 256423105 8360270 complement(5098800..5099129) 1 NC_013132.1 hypothetical protein 5099129 8360270 Cpin_4097 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123758.1 5098800 R 485918 CDS YP_003123759.1 256423106 8360271 5099382..5100545 1 NC_013132.1 PFAM: cytochrome P450; KEGG: bsu:BSU12210 hypothetical protein; cytochrome P450 5100545 8360271 Cpin_4098 Chitinophaga pinensis DSM 2588 cytochrome P450 YP_003123759.1 5099382 D 485918 CDS YP_003123760.1 256423107 8360272 5100777..5102579 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: pat:Patl_2544 periplasmic sensor hybrid histidine kinase; histidine kinase 5102579 8360272 Cpin_4099 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123760.1 5100777 D 485918 CDS YP_003123761.1 256423108 8360273 complement(5102611..5103588) 1 NC_013132.1 PFAM: terpene synthase metal-binding domain protein; KEGG: scl:sce8552 terpene cyclase; terpene synthase metal-binding domain-containing protein 5103588 8360273 Cpin_4100 Chitinophaga pinensis DSM 2588 terpene synthase metal-binding domain-containing protein YP_003123761.1 5102611 R 485918 CDS YP_003123762.1 256423109 8360274 complement(5103820..5104563) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: scl:sce8812 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 5104563 8360274 Cpin_4101 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123762.1 5103820 R 485918 CDS YP_003123763.1 256423110 8360275 5104660..5105016 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: amc:MADE_01970 transcriptional regulator; HxlR family transcriptional regulator 5105016 8360275 Cpin_4102 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123763.1 5104660 D 485918 CDS YP_003123764.1 256423111 8360276 5105060..5106388 1 NC_013132.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: hemolysin protein; hypothetical protein 5106388 8360276 Cpin_4103 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123764.1 5105060 D 485918 CDS YP_003123765.1 256423112 8360277 5106494..5109013 1 NC_013132.1 KEGG: gbm:Gbem_3438 hypothetical protein; hypothetical protein 5109013 8360277 Cpin_4104 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123765.1 5106494 D 485918 CDS YP_003123766.1 256423113 8360278 5110026..5110448 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5110448 8360278 Cpin_4105 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123766.1 5110026 D 485918 CDS YP_003123767.1 256423114 8360279 5110652..5110969 1 NC_013132.1 hypothetical protein 5110969 8360279 Cpin_4106 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123767.1 5110652 D 485918 CDS YP_003123768.1 256423115 8360280 complement(5111115..5112881) 1 NC_013132.1 PFAM: peptidase M23; KEGG: hypothetical protein; peptidase M23 5112881 8360280 Cpin_4107 Chitinophaga pinensis DSM 2588 peptidase M23 YP_003123768.1 5111115 R 485918 CDS YP_003123769.1 256423116 8360281 complement(5113499..5114416) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 5114416 8360281 Cpin_4108 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123769.1 5113499 R 485918 CDS YP_003123770.1 256423117 8360282 complement(5114450..5115259) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vha:VIBHAR_05256 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5115259 8360282 Cpin_4109 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123770.1 5114450 R 485918 CDS YP_003123771.1 256423118 8360283 complement(5115403..5116377) 1 NC_013132.1 PFAM: xylose isomerase; KEGG: pat:Patl_2692 twin-arginine translocation pathway signal; xylose isomerase 5116377 8360283 Cpin_4110 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003123771.1 5115403 R 485918 CDS YP_003123772.1 256423119 8360284 complement(5116528..5116839) 1 NC_013132.1 hypothetical protein 5116839 8360284 Cpin_4111 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123772.1 5116528 R 485918 CDS YP_003123773.1 256423120 8360285 complement(5116979..5118109) 1 NC_013132.1 KEGG: dvl:Dvul_1585 membrane protein involved in aromatic hydrocarbon degradation; hypothetical protein 5118109 8360285 Cpin_4112 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123773.1 5116979 R 485918 CDS YP_003123774.1 256423121 8360286 complement(5118161..5128849) 1 NC_013132.1 KEGG: rso:RS05070 hemagglutinin/hemolysin- related protein; hypothetical protein 5128849 8360286 Cpin_4113 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123774.1 5118161 R 485918 CDS YP_003123775.1 256423122 8360287 5129099..5129725 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rso:RSc0292 response regulator transcription regulator protein; LuxR family transcriptional regulator 5129725 8360287 Cpin_4114 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003123775.1 5129099 D 485918 CDS YP_003123776.1 256423123 8360288 5129877..5131007 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 5131007 8360288 Cpin_4115 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003123776.1 5129877 D 485918 CDS YP_003123777.1 256423124 8360289 5131188..5132270 1 NC_013132.1 PFAM: protein of unknown function UPF0118; KEGG: gme:Gmet_2050 hypothetical protein; hypothetical protein 5132270 8360289 Cpin_4116 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123777.1 5131188 D 485918 CDS YP_003123778.1 256423125 8360290 5132354..5132635 1 NC_013132.1 hypothetical protein 5132635 8360290 Cpin_4117 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123778.1 5132354 D 485918 CDS YP_003123779.1 256423126 8360292 5133744..5134304 1 NC_013132.1 PFAM: adenylylsulfate kinase; KEGG: sus:Acid_7933 adenylylsulfate kinase / phosphoadenylylsulfate reductase (thioredoxin); adenylylsulfate kinase 5134304 8360292 Cpin_4119 Chitinophaga pinensis DSM 2588 adenylylsulfate kinase YP_003123779.1 5133744 D 485918 CDS YP_003123780.1 256423127 8360293 5134317..5135141 1 NC_013132.1 KEGG: bvi:Bcep1808_3211 lipopolysaccharide biosynthesis protein-like protein; hypothetical protein 5135141 8360293 Cpin_4120 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123780.1 5134317 D 485918 CDS YP_003123781.1 256423128 8360294 5135227..5137596 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 5137596 8360294 Cpin_4121 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123781.1 5135227 D 485918 CDS YP_003123782.1 256423129 8360295 complement(5137704..5138210) 1 NC_013132.1 hypothetical protein 5138210 8360295 Cpin_4122 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123782.1 5137704 R 485918 CDS YP_003123783.1 256423130 8360296 5138291..5138839 1 NC_013132.1 PFAM: protein of unknown function DUF1089; KEGG: pap:PSPA7_3300 hypothetical protein; hypothetical protein 5138839 8360296 Cpin_4123 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123783.1 5138291 D 485918 CDS YP_003123784.1 256423131 8360297 5138865..5139686 1 NC_013132.1 KEGG: met:M446_4458 hypothetical protein; hypothetical protein 5139686 8360297 Cpin_4124 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123784.1 5138865 D 485918 CDS YP_003123785.1 256423132 8360298 complement(5139797..5140360) 1 NC_013132.1 hypothetical protein 5140360 8360298 Cpin_4125 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123785.1 5139797 R 485918 CDS YP_003123786.1 256423133 8360299 complement(5140799..5141644) 1 NC_013132.1 PFAM: glycoside hydrolase family 16; KEGG: glycoside hydrolase; glycoside hydrolase 5141644 8360299 Cpin_4126 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123786.1 5140799 R 485918 CDS YP_003123787.1 256423134 8360300 5141883..5144114 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; KEGG: rpc:RPC_3780 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 5144114 8360300 Cpin_4127 Chitinophaga pinensis DSM 2588 multi-sensor signal transduction histidine kinase YP_003123787.1 5141883 D 485918 CDS YP_003123788.1 256423135 8360301 5144156..5144374 1 NC_013132.1 KEGG: pca:Pcar_2497 hypothetical protein; hypothetical protein 5144374 8360301 Cpin_4128 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123788.1 5144156 D 485918 CDS YP_003123789.1 256423136 8360302 complement(5144364..5149391) 1 NC_013132.1 KEGG: sde:Sde_1638 hypothetical protein; hypothetical protein 5149391 8360302 Cpin_4129 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123789.1 5144364 R 485918 CDS YP_003123790.1 256423137 8360303 complement(5149415..5149840) 1 NC_013132.1 hypothetical protein 5149840 8360303 Cpin_4130 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123790.1 5149415 R 485918 CDS YP_003123791.1 256423138 8360304 5149918..5150151 1 NC_013132.1 hypothetical protein 5150151 8360304 Cpin_4131 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123791.1 5149918 D 485918 CDS YP_003123792.1 256423139 8360305 complement(5150148..5151047) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 5151047 8360305 Cpin_4132 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123792.1 5150148 R 485918 CDS YP_003123793.1 256423140 8360306 complement(5151177..5153729) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sfr:Sfri_4008 TonB-dependent receptor, plug; TonB-dependent receptor 5153729 8360306 Cpin_4133 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003123793.1 5151177 R 485918 CDS YP_003123794.1 256423141 8360307 complement(5153813..5154178) 1 NC_013132.1 PFAM: regulatory protein LysR; KEGG: tdn:Suden_1537 ModE family transcriptional regulator; ModE family transcriptional regulator 5154178 8360307 Cpin_4134 Chitinophaga pinensis DSM 2588 ModE family transcriptional regulator YP_003123794.1 5153813 R 485918 CDS YP_003123795.1 256423142 8360308 complement(5154277..5155257) 1 NC_013132.1 KEGG: GG15474 gene product from transcript GG15474- RA; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 5155257 8360308 Cpin_4135 Chitinophaga pinensis DSM 2588 molybdenum cofactor biosynthesis protein A YP_003123795.1 5154277 R 485918 CDS YP_003123796.1 256423143 8360309 complement(5155257..5155856) 1 NC_013132.1 KEGG: mxa:MXAN_6110 hypothetical protein; hypothetical protein 5155856 8360309 Cpin_4136 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123796.1 5155257 R 485918 CDS YP_003123797.1 256423144 8360310 complement(5155868..5156986) 1 NC_013132.1 PFAM: protein of unknown function DUF182; KEGG: mxa:MXAN_6109 XdhC/CoxI family protein; xanthine dehydrogenase 5156986 8360310 Cpin_4137 Chitinophaga pinensis DSM 2588 xanthine dehydrogenase YP_003123797.1 5155868 R 485918 CDS YP_003123798.1 256423145 8360311 complement(5156990..5157649) 1 NC_013132.1 KEGG: pfo:Pfl01_2175 hypothetical protein; hypothetical protein 5157649 8360311 Cpin_4138 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123798.1 5156990 R 485918 CDS YP_003123799.1 256423146 8360312 complement(5157686..5159860) 1 NC_013132.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pfo:Pfl01_2174 twin-arginine translocation pathway signal; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 5159860 8360312 Cpin_4139 Chitinophaga pinensis DSM 2588 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_003123799.1 5157686 R 485918 CDS YP_003123800.1 256423147 8360313 complement(5159869..5160342) 1 NC_013132.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bmj:BMULJ_01280 isoquinoline 1- oxidoreductase, alpha subunit; (2Fe-2S)-binding domain-containing protein 5160342 8360313 Cpin_4140 Chitinophaga pinensis DSM 2588 (2Fe-2S)-binding domain-containing protein YP_003123800.1 5159869 R 485918 CDS YP_003123801.1 256423148 8360314 complement(5160811..5161140) 1 NC_013132.1 KEGG: yen:YE1936 hypothetical protein; hypothetical protein 5161140 8360314 Cpin_4141 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123801.1 5160811 R 485918 CDS YP_003123802.1 256423149 8360315 complement(5161151..5165380) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5165380 8360315 Cpin_4142 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123802.1 5161151 R 485918 CDS YP_003123803.1 256423150 8360316 complement(5165642..5166319) 1 NC_013132.1 KEGG: rpe:RPE_4489 hypothetical protein; hypothetical protein 5166319 8360316 Cpin_4143 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123803.1 5165642 R 485918 CDS YP_003123804.1 256423151 8360317 5166537..5169815 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 5169815 8360317 Cpin_4144 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123804.1 5166537 D 485918 CDS YP_003123805.1 256423152 8360318 complement(5169919..5170728) 1 NC_013132.1 KEGG: bcy:Bcer98_2126 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 5170728 8360318 Cpin_4145 Chitinophaga pinensis DSM 2588 protein tyrosine/serine phosphatase YP_003123805.1 5169919 R 485918 CDS YP_003123806.1 256423153 8360319 complement(5170759..5173644) 1 NC_013132.1 TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC2520 TonB-dependent receptor; TonB-dependent receptor 5173644 8360319 Cpin_4146 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003123806.1 5170759 R 485918 CDS YP_003123807.1 256423154 8360320 5174052..5175368 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hne:HNE_0405 AraC family transcriptional regulator; AraC family transcriptional regulator 5175368 8360320 Cpin_4147 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123807.1 5174052 D 485918 CDS YP_003123808.1 256423155 8360321 5175389..5175793 1 NC_013132.1 KEGG: bcr:BCAH187_A2849 hypothetical protein; hypothetical protein 5175793 8360321 Cpin_4148 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123808.1 5175389 D 485918 CDS YP_003123809.1 256423156 8360322 5175865..5177637 1 NC_013132.1 PFAM: glycoside hydrolase family 5; carbohydrate-binding protein; SMART: cellulose binding type IV; KEGG: cja:CJA_2760 cellulase, , cel5G; glycoside hydrolase 5177637 8360322 Cpin_4149 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123809.1 5175865 D 485918 CDS YP_003123810.1 256423157 8360323 complement(5177975..5179213) 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 5179213 8360323 Cpin_4150 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003123810.1 5177975 R 485918 CDS YP_003123811.1 256423158 8360324 complement(5179350..5179712) 1 NC_013132.1 PFAM: protein of unknown function DUF779; KEGG: aeh:Mlg_2727 hypothetical protein; hypothetical protein 5179712 8360324 Cpin_4151 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123811.1 5179350 R 485918 CDS YP_003123812.1 256423159 8360325 complement(5179904..5181433) 1 NC_013132.1 PFAM: aldehyde dehydrogenase; KEGG: noc:Noc_2916 aldehyde dehydrogenase; aldehyde dehydrogenase 5181433 8360325 Cpin_4152 Chitinophaga pinensis DSM 2588 aldehyde dehydrogenase YP_003123812.1 5179904 R 485918 CDS YP_003123813.1 256423160 8360326 5181591..5182520 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_01851 AraC-type DNA-binding domain- containing protein; AraC family transcriptional regulator 5182520 8360326 Cpin_4153 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123813.1 5181591 D 485918 CDS YP_003123814.1 256423161 8360327 complement(5182628..5183866) 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 5183866 8360327 Cpin_4154 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003123814.1 5182628 R 485918 CDS YP_003123815.1 256423162 8360329 5186049..5186267 1 NC_013132.1 hypothetical protein 5186267 8360329 Cpin_4156 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123815.1 5186049 D 485918 CDS YP_003123816.1 256423163 8360330 5186348..5186812 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; K03564 peroxiredoxin Q/BCP; alkyl hydroperoxide reductase 5186812 8360330 Cpin_4157 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003123816.1 5186348 D 485918 CDS YP_003123817.1 256423164 8360331 complement(5187159..5187662) 1 NC_013132.1 KEGG: met:M446_4604 hypothetical protein; hypothetical protein 5187662 8360331 Cpin_4158 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123817.1 5187159 R 485918 CDS YP_003123818.1 256423165 8360332 5187876..5190929 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; two component regulator three Y domain protein; histidine kinase dimerisation and phosphoacceptor region; two component regulator propeller; KEGG: sus:Acid_4777 histidine kinase; histidine kinase 5190929 8360332 Cpin_4159 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123818.1 5187876 D 485918 CDS YP_003123819.1 256423166 8360333 5190961..5191608 1 NC_013132.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bcz:BCZK5108 response regulator; LuxR family transcriptional regulator 5191608 8360333 Cpin_4160 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003123819.1 5190961 D 485918 CDS YP_003123820.1 256423167 8360334 complement(5191837..5193633) 1 NC_013132.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: sus:Acid_6510 cytochrome-c peroxidase; cytochrome C peroxidase 5193633 8360334 Cpin_4161 Chitinophaga pinensis DSM 2588 cytochrome C peroxidase YP_003123820.1 5191837 R 485918 CDS YP_003123821.1 256423168 8360335 complement(5193707..5195221) 1 NC_013132.1 PFAM: protein of unknown function DUF839; KEGG: mno:Mnod_0281 protein of unknown function DUF839; hypothetical protein 5195221 8360335 Cpin_4162 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123821.1 5193707 R 485918 CDS YP_003123822.1 256423169 8360337 5195667..5197325 1 NC_013132.1 KEGG: rme:Rmet_1657 conserved hypothetical protein- transmembrane prediction; hypothetical protein 5197325 8360337 Cpin_4164 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123822.1 5195667 D 485918 CDS YP_003123823.1 256423170 8360338 complement(5197367..5197900) 1 NC_013132.1 PFAM: methyltransferase type 12; methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; KEGG: sun:SUN_0643 tellurite resistance protein TehB; type 12 methyltransferase 5197900 8360338 Cpin_4165 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003123823.1 5197367 R 485918 CDS YP_003123824.1 256423171 8360339 complement(5198006..5206507) 1 NC_013132.1 KEGG: aby:ABAYE0792 hypothetical protein; hypothetical protein 5206507 8360339 Cpin_4166 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123824.1 5198006 R 485918 CDS YP_003123825.1 256423172 8360340 5207087..5207587 1 NC_013132.1 PFAM: DinB family protein; DinB family protein 5207587 8360340 Cpin_4167 Chitinophaga pinensis DSM 2588 DinB family protein YP_003123825.1 5207087 D 485918 CDS YP_003123826.1 256423173 8360341 5207689..5208111 1 NC_013132.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abc:ACICU_03092 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 5208111 8360341 Cpin_4168 Chitinophaga pinensis DSM 2588 3-demethylubiquinone-9 3-methyltransferase YP_003123826.1 5207689 D 485918 CDS YP_003123827.1 256423174 8360342 complement(5208195..5209532) 1 NC_013132.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: nar:Saro_3526 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 5209532 8360342 Cpin_4169 Chitinophaga pinensis DSM 2588 type I phosphodiesterase/nucleotide pyrophosphatase YP_003123827.1 5208195 R 485918 CDS YP_003123828.1 256423175 8360343 5209766..5211565 1 NC_013132.1 hypothetical protein 5211565 8360343 Cpin_4170 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123828.1 5209766 D 485918 CDS YP_003123829.1 256423176 8360344 5211562..5212878 1 NC_013132.1 KEGG: rpe:RPE_2447 hypothetical protein; hypothetical protein 5212878 8360344 Cpin_4171 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123829.1 5211562 D 485918 CDS YP_003123830.1 256423177 8360345 5212875..5215025 1 NC_013132.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: nha:Nham_2002 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 5215025 8360345 Cpin_4172 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003123830.1 5212875 D 485918 CDS YP_003123831.1 256423178 8360346 complement(5215073..5216122) 1 NC_013132.1 KEGG: sus:Acid_4741 hypothetical protein; hypothetical protein 5216122 8360346 Cpin_4173 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123831.1 5215073 R 485918 CDS YP_003123832.1 256423179 8360347 complement(5216268..5217122) 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: amc:MADE_01501 secreted serine protease, subtilisin family, possibly excreted; PKD domain-containing protein 5217122 8360347 Cpin_4174 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003123832.1 5216268 R 485918 CDS YP_003123833.1 256423180 8360348 complement(5217147..5218661) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5218661 8360348 Cpin_4175 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003123833.1 5217147 R 485918 CDS YP_003123834.1 256423181 8360349 complement(5218676..5221936) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 5221936 8360349 Cpin_4176 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003123834.1 5218676 R 485918 CDS YP_003123835.1 256423182 8360350 complement(5222127..5223275) 1 NC_013132.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor; anti-FecI sigma factor FecR 5223275 8360350 Cpin_4177 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003123835.1 5222127 R 485918 CDS YP_003123836.1 256423183 8360351 complement(5223331..5223912) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bra:BRADO4891 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 5223912 8360351 Cpin_4178 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003123836.1 5223331 R 485918 CDS YP_003123837.1 256423184 8360352 5224036..5224911 1 NC_013132.1 hypothetical protein 5224911 8360352 Cpin_4179 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123837.1 5224036 D 485918 CDS YP_003123838.1 256423185 8360353 complement(5224982..5226523) 1 NC_013132.1 KEGG: aba:Acid345_0662 hypothetical protein; hypothetical protein 5226523 8360353 Cpin_4180 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123838.1 5224982 R 485918 CDS YP_003123839.1 256423186 8360354 5226745..5227221 1 NC_013132.1 PFAM: 17 kDa surface antigen; KEGG: tbd:Tbd_2341 hypothetical protein; hypothetical protein 5227221 8360354 Cpin_4181 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123839.1 5226745 D 485918 CDS YP_003123840.1 256423187 8360355 5227404..5228480 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: sus:Acid_5877 hypothetical protein; hypothetical protein 5228480 8360355 Cpin_4182 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123840.1 5227404 D 485918 CDS YP_003123841.1 256423188 8360356 5228535..5229020 1 NC_013132.1 PFAM: protein of unknown function DUF296; KEGG: cti:RALTA_A1663 conserved hypothetical protein; exported protein; hypothetical protein 5229020 8360356 Cpin_4183 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123841.1 5228535 D 485918 CDS YP_003123842.1 256423189 8360357 complement(5229027..5229407) 1 NC_013132.1 hypothetical protein 5229407 8360357 Cpin_4184 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123842.1 5229027 R 485918 CDS YP_003123843.1 256423190 8360358 complement(5229477..5230670) 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: rpi:Rpic_0631 acyltransferase 3; acyltransferase 3 5230670 8360358 Cpin_4185 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003123843.1 5229477 R 485918 CDS YP_003123844.1 256423191 8360359 complement(5230809..5232035) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_1491 major facilitator transporter; major facilitator superfamily protein 5232035 8360359 Cpin_4186 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003123844.1 5230809 R 485918 CDS YP_003123845.1 256423192 8360360 complement(5232332..5234539) 1 NC_013132.1 hypothetical protein 5234539 8360360 Cpin_4187 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123845.1 5232332 R 485918 CDS YP_003123846.1 256423193 8360361 5234898..5237627 1 NC_013132.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: bcr:BCAH187_A2347 alfa-L-rhamnosidase; alpha-L-rhamnosidase 5237627 8360361 Cpin_4188 Chitinophaga pinensis DSM 2588 alpha-L-rhamnosidase YP_003123846.1 5234898 D 485918 CDS YP_003123847.1 256423194 8360362 5237649..5238170 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein; N-acetyltransferase GCN5 5238170 8360362 Cpin_4189 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003123847.1 5237649 D 485918 CDS YP_003123848.1 256423195 8360363 complement(5238154..5238780) 1 NC_013132.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: dol:Dole_1989 methyltransferase type 11; type 12 methyltransferase 5238780 8360363 Cpin_4190 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003123848.1 5238154 R 485918 CDS YP_003123849.1 256423196 8360364 complement(5239038..5239934) 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bha:BH1937 hypothetical protein; hypothetical protein 5239934 8360364 Cpin_4191 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123849.1 5239038 R 485918 CDS YP_003123850.1 256423197 8360365 complement(5240019..5240351) 1 NC_013132.1 PFAM: cupin; KEGG: pap:PSPA7_3290 cupin 2 domain-containing protein; cupin 5240351 8360365 Cpin_4192 Chitinophaga pinensis DSM 2588 cupin YP_003123850.1 5240019 R 485918 CDS YP_003123851.1 256423198 8360366 5240504..5240965 1 NC_013132.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: swi:Swit_0985 AsnC family transcriptional regulator; AsnC family transcriptional regulator 5240965 8360366 Cpin_4193 Chitinophaga pinensis DSM 2588 AsnC family transcriptional regulator YP_003123851.1 5240504 D 485918 CDS YP_003123852.1 256423199 8360367 5240976..5241560 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: aha:AHA_0704 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase; Crp/Fnr family transcriptional regulator 5241560 8360367 Cpin_4194 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123852.1 5240976 D 485918 CDS YP_003123853.1 256423200 8360368 5241701..5243950 1 NC_013132.1 PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: mgm:Mmc1_1094 outer membrane adhesin like protein; FG-GAP repeat-containing protein 5243950 8360368 Cpin_4195 Chitinophaga pinensis DSM 2588 FG-GAP repeat-containing protein YP_003123853.1 5241701 D 485918 CDS YP_003123854.1 256423201 8360369 5244089..5246347 1 NC_013132.1 PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: mgm:Mmc1_1094 outer membrane adhesin like protein; FG-GAP repeat-containing protein 5246347 8360369 Cpin_4196 Chitinophaga pinensis DSM 2588 FG-GAP repeat-containing protein YP_003123854.1 5244089 D 485918 CDS YP_003123855.1 256423202 8360370 5246614..5249805 1 NC_013132.1 PFAM: peptidase domain protein; fibronectin type III domain protein; SMART: fibronectin type III domain protein; KEGG: noc:Noc_0728 hypothetical protein; peptidase domain-containing protein 5249805 8360370 Cpin_4197 Chitinophaga pinensis DSM 2588 peptidase domain-containing protein YP_003123855.1 5246614 D 485918 CDS YP_003123856.1 256423203 8360371 5249936..5250337 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr2185 hypothetical protein; bleomycin resistance protein 5250337 8360371 Cpin_4198 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003123856.1 5249936 D 485918 CDS YP_003123857.1 256423204 8360372 complement(5250385..5251254) 1 NC_013132.1 KEGG: rsh:Rsph17029_1710 flagellar hook-associated protein FlgK; hypothetical protein 5251254 8360372 Cpin_4199 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123857.1 5250385 R 485918 CDS YP_003123858.1 256423205 8360373 complement(5251309..5253084) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0999 ABC-type multidrug transport system ATPase and permease component-like protein; ABC transporter 5253084 8360373 Cpin_4200 Chitinophaga pinensis DSM 2588 ABC transporter YP_003123858.1 5251309 R 485918 CDS YP_003123859.1 256423206 8360374 complement(5253162..5253461) 1 NC_013132.1 hypothetical protein 5253461 8360374 Cpin_4201 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123859.1 5253162 R 485918 CDS YP_003123860.1 256423207 8360375 complement(5253524..5254093) 1 NC_013132.1 hypothetical protein 5254093 8360375 Cpin_4202 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123860.1 5253524 R 485918 CDS YP_003123861.1 256423208 8360376 complement(5254307..5254627) 1 NC_013132.1 PFAM: LytTr DNA-binding region; KEGG: bar:GBAA1861 methyl-accepting/DNA response regulator; response regulator receiver protein 5254627 8360376 Cpin_4203 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003123861.1 5254307 R 485918 CDS YP_003123862.1 256423209 8360377 complement(5255057..5255344) 1 NC_013132.1 hypothetical protein 5255344 8360377 Cpin_4204 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123862.1 5255057 R 485918 CDS YP_003123863.1 256423210 8360379 complement(5255647..5257224) 1 NC_013132.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase; resolvase domain-containing protein 5257224 8360379 Cpin_4205 Chitinophaga pinensis DSM 2588 resolvase domain-containing protein YP_003123863.1 5255647 R 485918 CDS YP_003123864.1 256423211 8360380 complement(5257166..5257423) 1 NC_013132.1 hypothetical protein 5257423 8360380 Cpin_4206 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123864.1 5257166 R 485918 CDS YP_003123865.1 256423212 8360381 complement(5258542..5258748) 1 NC_013132.1 hypothetical protein 5258748 8360381 Cpin_4207 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123865.1 5258542 R 485918 CDS YP_003123866.1 256423213 8360382 complement(5258750..5259160) 1 NC_013132.1 response regulator receiver protein 5259160 8360382 Cpin_4208 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003123866.1 5258750 R 485918 CDS YP_003123867.1 256423214 8360383 complement(5259300..5260229) 1 NC_013132.1 KEGG: bcy:Bcer98_0801 integral membrane sensor signal transduction histidine kinase; hypothetical protein 5260229 8360383 Cpin_4209 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123867.1 5259300 R 485918 CDS YP_003123868.1 256423215 8360384 5260712..5260945 1 NC_013132.1 KEGG: nis:NIS_1682 hypothetical protein; XRE family transcriptional regulator 5260945 8360384 Cpin_4210 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003123868.1 5260712 D 485918 CDS YP_003123869.1 256423216 8360385 join(5261630..5261890,5261890..5262741) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase; transposase IS3/IS911 family protein 5262741 8360385 Cpin_4211 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003123869.1 5261630 D 485918 CDS YP_003123870.1 256423217 8360386 5262939..5266187 1 NC_013132.1 KEGG: pde:Pden_0447 hypothetical protein; hypothetical protein 5266187 8360386 Cpin_4212 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123870.1 5262939 D 485918 CDS YP_003123871.1 256423218 8360387 5266184..5267086 1 NC_013132.1 KEGG: bpa:BPP0493 hypothetical protein; hypothetical protein 5267086 8360387 Cpin_4213 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123871.1 5266184 D 485918 CDS YP_003123872.1 256423219 8360388 5267235..5267330 1 NC_013132.1 hypothetical protein 5267330 8360388 Cpin_4214 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123872.1 5267235 D 485918 CDS YP_003123873.1 256423220 8360389 5269341..5269658 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: dps:DP1713 transposase; transposase IS3/IS911 family protein 5269658 8360389 Cpin_4216 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003123873.1 5269341 D 485918 CDS YP_003123874.1 256423221 8360390 5269691..5270515 1 NC_013132.1 PFAM: integrase catalytic region; KEGG: mgm:Mmc1_2644 integrase, catalytic region; integrase catalytic subunit 5270515 8360390 Cpin_4217 Chitinophaga pinensis DSM 2588 integrase catalytic subunit YP_003123874.1 5269691 D 485918 CDS YP_003123875.1 256423222 8360391 5271401..5272327 1 NC_013132.1 KEGG: bvi:Bcep1808_6840 hypothetical protein; hypothetical protein 5272327 8360391 Cpin_4218 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123875.1 5271401 D 485918 CDS YP_003123876.1 256423223 8360392 5272842..5275184 1 NC_013132.1 KEGG: afe:Lferr_0294 ATP-dependent endonuclease, OLD family; ATP-dependent endonuclease, OLD family 5275184 8360392 Cpin_4219 Chitinophaga pinensis DSM 2588 ATP-dependent endonuclease, OLD family YP_003123876.1 5272842 D 485918 CDS YP_003123877.1 256423224 8360393 5275205..5277091 1 NC_013132.1 KEGG: afe:Lferr_0295 hypothetical protein; hypothetical protein 5277091 8360393 Cpin_4220 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123877.1 5275205 D 485918 CDS YP_003123878.1 256423225 8360394 complement(5277368..5278570) 1 NC_013132.1 KEGG: bcr:BCAH187_A3022 hypothetical protein; hydrolase-like protein 5278570 8360394 Cpin_4221 Chitinophaga pinensis DSM 2588 hydrolase-like protein YP_003123878.1 5277368 R 485918 CDS YP_003123879.1 256423226 8360395 complement(5278592..5280514) 1 NC_013132.1 KEGG: gdj:Gdia_1062 hypothetical protein; hypothetical protein 5280514 8360395 Cpin_4222 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123879.1 5278592 R 485918 CDS YP_003123880.1 256423227 8360396 complement(5280974..5281519) 1 NC_013132.1 hypothetical protein 5281519 8360396 Cpin_4223 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123880.1 5280974 R 485918 CDS YP_003123881.1 256423228 8360397 complement(5281524..5282054) 1 NC_013132.1 hypothetical protein 5282054 8360397 Cpin_4224 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123881.1 5281524 R 485918 CDS YP_003123882.1 256423229 8360398 complement(5282184..5284613) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5284613 8360398 Cpin_4225 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123882.1 5282184 R 485918 CDS YP_003123883.1 256423230 8360400 complement(5285194..5285844) 1 NC_013132.1 hypothetical protein 5285844 8360400 Cpin_4227 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123883.1 5285194 R 485918 CDS YP_003123884.1 256423231 8360401 complement(5285862..5286926) 1 NC_013132.1 KEGG: ecf:ECH74115_0842 protein TolA; hypothetical protein 5286926 8360401 Cpin_4228 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123884.1 5285862 R 485918 CDS YP_003123885.1 256423232 8360402 complement(5287745..5292328) 1 NC_013132.1 PFAM: FG-GAP repeat protein; cell surface receptor IPT/TIG domain protein; SMART: cell surface receptor IPT/TIG domain protein; KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein; FG-GAP repeat-containing protein 5292328 8360402 Cpin_4229 Chitinophaga pinensis DSM 2588 FG-GAP repeat-containing protein YP_003123885.1 5287745 R 485918 CDS YP_003123886.1 256423233 8360404 5292981..5294861 1 NC_013132.1 PFAM: amidohydrolase; KEGG: pfl:PFL_4131 twin-arginine translocation pathway signal sequence domain-containing protein; amidohydrolase 5294861 8360404 Cpin_4231 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003123886.1 5292981 D 485918 CDS YP_003123887.1 256423234 8360405 complement(5295329..5295934) 1 NC_013132.1 KEGG: scl:sce4795 ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 5295934 8360405 Cpin_4232 Chitinophaga pinensis DSM 2588 50S ribosomal protein L11 YP_003123887.1 5295329 R 485918 CDS YP_003123888.1 256423235 8360406 complement(5296007..5296111) 1 NC_013132.1 hypothetical protein 5296111 8360406 Cpin_4233 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123888.1 5296007 R 485918 CDS YP_003123889.1 256423236 8360407 5296168..5296914 1 NC_013132.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: gsu:GSU3421 Crp/Fnr family transcriptional regulator; Crp/Fnr family transcriptional regulator 5296914 8360407 Cpin_4234 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123889.1 5296168 D 485918 CDS YP_003123890.1 256423237 8360408 5297027..5297302 1 NC_013132.1 hypothetical protein 5297302 8360408 Cpin_4235 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123890.1 5297027 D 485918 CDS YP_003123891.1 256423238 8360409 5297580..5299895 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ppd:Ppro_3009 hypothetical protein; signal transduction histidine kinase 5299895 8360409 Cpin_4236 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003123891.1 5297580 D 485918 CDS YP_003123892.1 256423239 8360410 complement(5299958..5300335) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: abu:Abu_0028 hypothetical protein; HxlR family transcriptional regulator 5300335 8360410 Cpin_4237 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123892.1 5299958 R 485918 CDS YP_003123893.1 256423240 8360411 5300463..5301257 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1990 oxidoreductase; short chain dehydrogenase 5301257 8360411 Cpin_4238 Chitinophaga pinensis DSM 2588 short chain dehydrogenase YP_003123893.1 5300463 D 485918 CDS YP_003123894.1 256423241 8360412 5301277..5301600 1 NC_013132.1 KEGG: rsq:Rsph17025_3826 hypothetical protein; hypothetical protein 5301600 8360412 Cpin_4239 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123894.1 5301277 D 485918 CDS YP_003123895.1 256423242 8360413 complement(5301737..5302711) 1 NC_013132.1 KEGG: pat:Patl_2657 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10; endo-1,4-beta-xylanase 5302711 8360413 Cpin_4240 Chitinophaga pinensis DSM 2588 endo-1,4-beta-xylanase YP_003123895.1 5301737 R 485918 CDS YP_003123896.1 256423243 8360414 complement(5302940..5304607) 1 NC_013132.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: cak:Caul_1302 glycoside hydrolase family alpha-L-fucosidase; glycoside hydrolase 5304607 8360414 Cpin_4241 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123896.1 5302940 R 485918 CDS YP_003123897.1 256423244 8360415 5304850..5306766 1 NC_013132.1 PFAM: esterase; glycoside hydrolase family 13 domain protein; KEGG: sus:Acid_2103 esterase; esterase 5306766 8360415 Cpin_4242 Chitinophaga pinensis DSM 2588 esterase YP_003123897.1 5304850 D 485918 CDS YP_003123898.1 256423245 8360416 complement(5306836..5307153) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bca:BCE_3438 hypothetical protein; HxlR family transcriptional regulator 5307153 8360416 Cpin_4243 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123898.1 5306836 R 485918 CDS YP_003123899.1 256423246 8360417 5307267..5308133 1 NC_013132.1 PFAM: NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: hypothetical protein; NmrA family protein 5308133 8360417 Cpin_4244 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003123899.1 5307267 D 485918 CDS YP_003123900.1 256423247 8360418 complement(5308277..5309056) 1 NC_013132.1 PFAM: protein of unknown function DUF323; KEGG: hypothetical protein; hypothetical protein 5309056 8360418 Cpin_4245 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123900.1 5308277 R 485918 CDS YP_003123901.1 256423248 8360419 complement(5309056..5309793) 1 NC_013132.1 hypothetical protein 5309793 8360419 Cpin_4246 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123901.1 5309056 R 485918 CDS YP_003123902.1 256423249 8360421 5310248..5311774 1 NC_013132.1 attaches phosphoethanolamine to lipid A at the 1 position of the disaccharide backbone in contrast to other gram-negative bacteria; lipid A phosphoethanolamine transferase 5311774 8360421 Cpin_4248 Chitinophaga pinensis DSM 2588 lipid A phosphoethanolamine transferase YP_003123902.1 5310248 D 485918 CDS YP_003123903.1 256423250 8360422 complement(5312016..5313128) 1 NC_013132.1 PFAM: monooxygenase FAD-binding; KEGG: msl:Msil_0387 monooxygenase FAD-binding; FAD-binding monooxygenase 5313128 8360422 Cpin_4249 Chitinophaga pinensis DSM 2588 FAD-binding monooxygenase YP_003123903.1 5312016 R 485918 CDS YP_003123904.1 256423251 8360423 5313249..5314184 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dds:Ddes_0430 transcriptional regulator, AraC family; AraC family transcriptional regulator 5314184 8360423 Cpin_4250 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123904.1 5313249 D 485918 CDS YP_003123905.1 256423252 8360424 5314385..5314849 1 NC_013132.1 hypothetical protein 5314849 8360424 Cpin_4251 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123905.1 5314385 D 485918 CDS YP_003123906.1 256423253 8360425 complement(5314888..5315457) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ilo:IL2076 catabolite gene activator protein; Crp/Fnr family transcriptional regulator 5315457 8360425 Cpin_4252 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123906.1 5314888 R 485918 CDS YP_003123907.1 256423254 8360426 5315490..5315984 1 NC_013132.1 KEGG: rlt:Rleg2_5090 hypothetical protein; hypothetical protein 5315984 8360426 Cpin_4253 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123907.1 5315490 D 485918 CDS YP_003123908.1 256423255 8360427 complement(5316077..5317255) 1 NC_013132.1 PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_1438 monooxygenase, FAD-binding; FAD-binding monooxygenase 5317255 8360427 Cpin_4254 Chitinophaga pinensis DSM 2588 FAD-binding monooxygenase YP_003123908.1 5316077 R 485918 CDS YP_003123909.1 256423256 8360428 complement(5317362..5318015) 1 NC_013132.1 KEGG: bja:bll0718 transporter; arabinose efflux permease-like protein 5318015 8360428 Cpin_4255 Chitinophaga pinensis DSM 2588 arabinose efflux permease-like protein YP_003123909.1 5317362 R 485918 CDS YP_003123910.1 256423257 8360429 complement(5318217..5318795) 1 NC_013132.1 KEGG: mxa:MXAN_3813 hypothetical protein; hypothetical protein 5318795 8360429 Cpin_4256 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123910.1 5318217 R 485918 CDS YP_003123911.1 256423258 8360430 complement(5319286..5320056) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oan:Oant_1136 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5320056 8360430 Cpin_4257 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123911.1 5319286 R 485918 CDS YP_003123912.1 256423259 8360431 5320160..5320513 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A2547 transcriptional regulator, MarR family; HxlR family transcriptional regulator 5320513 8360431 Cpin_4258 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123912.1 5320160 D 485918 CDS YP_003123913.1 256423260 8360432 5320635..5321234 1 NC_013132.1 hypothetical protein 5321234 8360432 Cpin_4259 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123913.1 5320635 D 485918 CDS YP_003123914.1 256423261 8360433 5321547..5322125 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 5322125 8360433 Cpin_4260 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123914.1 5321547 D 485918 CDS YP_003123915.1 256423262 8360434 complement(5322242..5323669) 1 NC_013132.1 PFAM: amidase; KEGG: mch:Mchl_4838 amidase; amidase 5323669 8360434 Cpin_4261 Chitinophaga pinensis DSM 2588 amidase YP_003123915.1 5322242 R 485918 CDS YP_003123916.1 256423263 8360435 complement(5323830..5324939) 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cak:Caul_5112 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 5324939 8360435 Cpin_4262 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003123916.1 5323830 R 485918 CDS YP_003123917.1 256423264 8360436 5325071..5325493 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A5212 hypothetical protein; HxlR family transcriptional regulator 5325493 8360436 Cpin_4263 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123917.1 5325071 D 485918 CDS YP_003123918.1 256423265 8360438 5325795..5327084 1 NC_013132.1 KEGG: abo:ABO_1733 hypothetical protein; hypothetical protein 5327084 8360438 Cpin_4265 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123918.1 5325795 D 485918 CDS YP_003123919.1 256423266 8360441 5328117..5330027 1 NC_013132.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: lpf:lpl1180 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 5330027 8360441 Cpin_4268 Chitinophaga pinensis DSM 2588 Sel1 domain-containing protein repeat-containing protein YP_003123919.1 5328117 D 485918 CDS YP_003123920.1 256423267 8360442 complement(5330097..5330336) 1 NC_013132.1 hypothetical protein 5330336 8360442 Cpin_4269 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123920.1 5330097 R 485918 CDS YP_003123921.1 256423268 8360443 5330684..5331802 1 NC_013132.1 KEGG: ccv:CCV52592_1819 hypothetical protein; hypothetical protein 5331802 8360443 Cpin_4270 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123921.1 5330684 D 485918 CDS YP_003123922.1 256423269 8360444 5331989..5335285 1 NC_013132.1 KEGG: mxa:MXAN_6376 hypothetical protein; hypothetical protein 5335285 8360444 Cpin_4271 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123922.1 5331989 D 485918 CDS YP_003123923.1 256423270 8360445 5335503..5335952 1 NC_013132.1 PFAM: cupin; KEGG: sus:Acid_7737 cupin 2 domain-containing protein; cupin 5335952 8360445 Cpin_4272 Chitinophaga pinensis DSM 2588 cupin YP_003123923.1 5335503 D 485918 CDS YP_003123924.1 256423271 8360447 complement(5336507..5337487) 1 NC_013132.1 KEGG: NSP1; Essential component of the nuclear pore complex, which mediates nuclear import and export; hypothetical protein 5337487 8360447 Cpin_4274 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123924.1 5336507 R 485918 CDS YP_003123925.1 256423272 8360448 5338000..5338611 1 NC_013132.1 PFAM: methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; methyltransferase type 12; KEGG: sus:Acid_4469 methyltransferase type 11; type 11 methyltransferase 5338611 8360448 Cpin_4275 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003123925.1 5338000 D 485918 CDS YP_003123926.1 256423273 8360449 complement(5338699..5339649) 1 NC_013132.1 KEGG: amc:MADE_03499 amidohydrolase; hypothetical protein 5339649 8360449 Cpin_4276 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123926.1 5338699 R 485918 CDS YP_003123927.1 256423274 8360450 5339817..5341796 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; hypothetical protein; hypothetical protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: bte:BTH_II2334 sensor histidine kinase; histidine kinase 5341796 8360450 Cpin_4277 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123927.1 5339817 D 485918 CDS YP_003123928.1 256423275 8360451 5341786..5342427 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: hch:HCH_00419 response regulator; LuxR family transcriptional regulator 5342427 8360451 Cpin_4278 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003123928.1 5341786 D 485918 CDS YP_003123929.1 256423276 8360452 complement(5342614..5343099) 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mlo:mlr4398 transcription regulator; MarR family transcriptional regulator 5343099 8360452 Cpin_4279 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003123929.1 5342614 R 485918 CDS YP_003123930.1 256423277 8360453 complement(5343175..5343546) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gur:Gura_0733 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 5343546 8360453 Cpin_4280 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003123930.1 5343175 R 485918 CDS YP_003123931.1 256423278 8360454 complement(5343649..5343756) 1 NC_013132.1 hypothetical protein 5343756 8360454 Cpin_4281 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123931.1 5343649 R 485918 CDS YP_003123932.1 256423279 8360455 complement(5343762..5344025) 1 NC_013132.1 hypothetical protein 5344025 8360455 Cpin_4282 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123932.1 5343762 R 485918 CDS YP_003123933.1 256423280 8360456 complement(5344228..5344599) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: pca:Pcar_1088 MarR family transcriptional regulator; HxlR family transcriptional regulator 5344599 8360456 Cpin_4283 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123933.1 5344228 R 485918 CDS YP_003123934.1 256423281 8360457 5344715..5345413 1 NC_013132.1 PFAM: nitroreductase; KEGG: aav:Aave_4019 nitroreductase; nitroreductase 5345413 8360457 Cpin_4284 Chitinophaga pinensis DSM 2588 nitroreductase YP_003123934.1 5344715 D 485918 CDS YP_003123935.1 256423282 8360458 complement(5345482..5345970) 1 NC_013132.1 KEGG: mxa:MXAN_1627 hypothetical protein; hypothetical protein 5345970 8360458 Cpin_4285 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123935.1 5345482 R 485918 CDS YP_003123936.1 256423283 8360459 complement(5346096..5346914) 1 NC_013132.1 PFAM: ion transporter ; Ion transport 2 domain protein; KEGG: dal:Dalk_2437 ion transport protein; ion transporter 5346914 8360459 Cpin_4286 Chitinophaga pinensis DSM 2588 ion transporter YP_003123936.1 5346096 R 485918 CDS YP_003123937.1 256423284 8360460 complement(5346951..5347310) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: dvm:DvMF_2974 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 5347310 8360460 Cpin_4287 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003123937.1 5346951 R 485918 CDS YP_003123938.1 256423285 8360461 5347424..5348212 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bra:BRADO1897 hydrolase; alpha/beta hydrolase 5348212 8360461 Cpin_4288 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003123938.1 5347424 D 485918 CDS YP_003123939.1 256423286 8360462 5348411..5350564 1 NC_013132.1 PFAM: glycoside hydrolase family 5; fibronectin type III domain protein; KEGG: cja:CJA_3369 cellulase, , cel5C; glycoside hydrolase 5350564 8360462 Cpin_4289 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003123939.1 5348411 D 485918 CDS YP_003123940.1 256423287 8360463 5350712..5351116 1 NC_013132.1 hypothetical protein 5351116 8360463 Cpin_4290 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123940.1 5350712 D 485918 CDS YP_003123941.1 256423288 8360464 complement(5351159..5354023) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; two component regulator three Y domain protein; histidine kinase dimerisation and phosphoacceptor region; two component regulator propeller; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein; histidine kinase 5354023 8360464 Cpin_4291 Chitinophaga pinensis DSM 2588 histidine kinase YP_003123941.1 5351159 R 485918 CDS YP_003123942.1 256423289 8360465 5354117..5355487 1 NC_013132.1 KEGG: dal:Dalk_2500 peptidase C11 clostripain; hypothetical protein 5355487 8360465 Cpin_4292 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123942.1 5354117 D 485918 CDS YP_003123943.1 256423290 8360466 complement(5355480..5355935) 1 NC_013132.1 hypothetical protein 5355935 8360466 Cpin_4293 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123943.1 5355480 R 485918 CDS YP_003123944.1 256423291 8360467 complement(5355975..5356631) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bce:BC5411 two-component response regulator YhcZ; LuxR family transcriptional regulator 5356631 8360467 Cpin_4294 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003123944.1 5355975 R 485918 CDS YP_003123945.1 256423292 8360468 complement(5356680..5356967) 1 NC_013132.1 hypothetical protein 5356967 8360468 Cpin_4295 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123945.1 5356680 R 485918 CDS YP_003123946.1 256423293 8360469 complement(5356985..5357239) 1 NC_013132.1 hypothetical protein 5357239 8360469 Cpin_4296 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123946.1 5356985 R 485918 CDS YP_003123947.1 256423294 8360470 5357426..5358265 1 NC_013132.1 KEGG: scl:sce7203 metalloprotease MEP1-like protein; metalloprotease MEP1-like protein 5358265 8360470 Cpin_4297 Chitinophaga pinensis DSM 2588 metalloprotease MEP1-like protein YP_003123947.1 5357426 D 485918 CDS YP_003123948.1 256423295 8360471 complement(5358559..5359020) 1 NC_013132.1 hypothetical protein 5359020 8360471 Cpin_4298 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123948.1 5358559 R 485918 CDS YP_003123949.1 256423296 8360472 5359202..5359768 1 NC_013132.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: abc:ACICU_01927 dihydrofolate reductase; bifunctional deaminase-reductase domain-containing protein 5359768 8360472 Cpin_4299 Chitinophaga pinensis DSM 2588 bifunctional deaminase-reductase domain-containing protein YP_003123949.1 5359202 D 485918 CDS YP_003123950.1 256423297 8360473 5359832..5360344 1 NC_013132.1 KEGG: jan:Jann_4029 hypothetical protein; hypothetical protein 5360344 8360473 Cpin_4300 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123950.1 5359832 D 485918 CDS YP_003123951.1 256423298 8360474 5360541..5361290 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msl:Msil_0061 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5361290 8360474 Cpin_4301 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123951.1 5360541 D 485918 CDS YP_003123952.1 256423299 8360475 5361354..5361932 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: pfl:PFL_2927 TetR family transcriptional regulator; TetR family transcriptional regulator 5361932 8360475 Cpin_4302 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003123952.1 5361354 D 485918 CDS YP_003123953.1 256423300 8360476 complement(5361935..5363053) 1 NC_013132.1 PFAM: peptidase S41; KEGG: eli:ELI_14225 hypothetical protein; peptidase S41 5363053 8360476 Cpin_4303 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003123953.1 5361935 R 485918 CDS YP_003123954.1 256423301 8360477 5363232..5363888 1 NC_013132.1 KEGG: sfu:Sfum_2664 hypothetical protein; hypothetical protein 5363888 8360477 Cpin_4304 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123954.1 5363232 D 485918 CDS YP_003123955.1 256423302 8360479 5364782..5365060 1 NC_013132.1 KEGG: eca:ECA1808 transporter; transporter 5365060 8360479 Cpin_4306 Chitinophaga pinensis DSM 2588 transporter YP_003123955.1 5364782 D 485918 CDS YP_003123956.1 256423303 8360480 complement(5365131..5367038) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: sat:SYN_02956 transcriptional regulator; Fis family transcriptional regulator 5367038 8360480 Cpin_4307 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003123956.1 5365131 R 485918 CDS YP_003123957.1 256423304 8360481 complement(5367035..5369254) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2118 signal transduction histidine kinase; signal transduction histidine kinase 5369254 8360481 Cpin_4308 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003123957.1 5367035 R 485918 CDS YP_003123958.1 256423305 8360482 5369428..5370213 1 NC_013132.1 KEGG: mlo:mlr0992 hypothetical protein; hypothetical protein 5370213 8360482 Cpin_4309 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123958.1 5369428 D 485918 CDS YP_003123959.1 256423306 8360483 5370241..5371170 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bur:Bcep18194_C6868 alpha/beta hydrolase; alpha/beta hydrolase 5371170 8360483 Cpin_4310 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003123959.1 5370241 D 485918 CDS YP_003123960.1 256423307 8360484 5371268..5371693 1 NC_013132.1 hypothetical protein 5371693 8360484 Cpin_4311 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123960.1 5371268 D 485918 CDS YP_003123961.1 256423308 8360485 5371781..5372806 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: hne:HNE_3360 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 5372806 8360485 Cpin_4312 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003123961.1 5371781 D 485918 CDS YP_003123962.1 256423309 8360486 5372809..5373378 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein; Crp/Fnr family transcriptional regulator 5373378 8360486 Cpin_4313 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123962.1 5372809 D 485918 CDS YP_003123963.1 256423310 8360487 complement(5373419..5373607) 1 NC_013132.1 hypothetical protein 5373607 8360487 Cpin_4314 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123963.1 5373419 R 485918 CDS YP_003123964.1 256423311 8360488 5373608..5373841 1 NC_013132.1 KEGG: mch:Mchl_2811 hypothetical protein; hypothetical protein 5373841 8360488 Cpin_4315 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123964.1 5373608 D 485918 CDS YP_003123965.1 256423312 8360489 5373951..5374805 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: spl:Spea_2717 AraC family transcriptional regulator; AraC family transcriptional regulator 5374805 8360489 Cpin_4316 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123965.1 5373951 D 485918 CDS YP_003123966.1 256423313 8360490 5374877..5375707 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: rlt:Rleg2_5171 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5375707 8360490 Cpin_4317 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003123966.1 5374877 D 485918 CDS YP_003123967.1 256423314 8360491 complement(5375891..5376685) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1990 oxidoreductase; short-chain dehydrogenase/reductase SDR 5376685 8360491 Cpin_4318 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123967.1 5375891 R 485918 CDS YP_003123968.1 256423315 8360492 complement(5377198..5378118) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 5378118 8360492 Cpin_4319 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123968.1 5377198 R 485918 CDS YP_003123969.1 256423316 8360493 complement(5378184..5378984) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pde:Pden_3117 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5378984 8360493 Cpin_4320 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123969.1 5378184 R 485918 CDS YP_003123970.1 256423317 8360494 5379181..5379963 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_1016 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5379963 8360494 Cpin_4321 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123970.1 5379181 D 485918 CDS YP_003123971.1 256423318 8360495 5379974..5380408 1 NC_013132.1 KEGG: bid:Bind_0038 signal peptide protein; signal peptide protein 5380408 8360495 Cpin_4322 Chitinophaga pinensis DSM 2588 signal peptide protein YP_003123971.1 5379974 D 485918 CDS YP_003123972.1 256423319 8360496 5380446..5380799 1 NC_013132.1 hypothetical protein 5380799 8360496 Cpin_4323 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123972.1 5380446 D 485918 CDS YP_003123973.1 256423320 8360497 5380813..5381721 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 5381721 8360497 Cpin_4324 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123973.1 5380813 D 485918 CDS YP_003123974.1 256423321 8360498 5381921..5383051 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sfu:Sfum_3484 redoxin domain protein; alkyl hydroperoxide reductase 5383051 8360498 Cpin_4325 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003123974.1 5381921 D 485918 CDS YP_003123975.1 256423322 8360499 5383148..5383726 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: vvu:VV1_0729 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase; Crp/Fnr family transcriptional regulator 5383726 8360499 Cpin_4326 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003123975.1 5383148 D 485918 CDS YP_003123976.1 256423323 8360500 5383797..5384684 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: sus:Acid_6732 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5384684 8360500 Cpin_4327 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003123976.1 5383797 D 485918 CDS YP_003123977.1 256423324 8360501 complement(5384741..5385493) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dehydrogenase/reductase protein; short-chain dehydrogenase/reductase SDR 5385493 8360501 Cpin_4328 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003123977.1 5384741 R 485918 CDS YP_003123978.1 256423325 8360502 complement(5385571..5386530) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 5386530 8360502 Cpin_4329 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123978.1 5385571 R 485918 CDS YP_003123979.1 256423326 8360503 complement(5386609..5387526) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll3668 transcriptional regulatory protein; AraC family transcriptional regulator 5387526 8360503 Cpin_4330 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123979.1 5386609 R 485918 CDS YP_003123980.1 256423327 8360504 complement(5387526..5388506) 1 NC_013132.1 PFAM: amidohydrolase 2; KEGG: predicted metal-dependent hydrolase of the TIM-barrel fold; amidohydrolase 2 5388506 8360504 Cpin_4331 Chitinophaga pinensis DSM 2588 amidohydrolase 2 YP_003123980.1 5387526 R 485918 CDS YP_003123981.1 256423328 8360505 5388712..5390559 1 NC_013132.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: mxa:MXAN_5269 S1D (lysyl endopeptidase) subfamily C-terminal domain protein; Ricin B lectin 5390559 8360505 Cpin_4332 Chitinophaga pinensis DSM 2588 Ricin B lectin YP_003123981.1 5388712 D 485918 CDS YP_003123982.1 256423329 8360506 complement(5390643..5392925) 1 NC_013132.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bpy:Bphyt_5991 xanthine dehydrogenase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 5392925 8360506 Cpin_4333 Chitinophaga pinensis DSM 2588 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_003123982.1 5390643 R 485918 CDS YP_003123983.1 256423330 8360507 complement(5392980..5394002) 1 NC_013132.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: pst:PSPTO_4651 oxidoreductase, molybdopterin- binding subunit; FAD-binding molybdopterin dehydrogenase 5394002 8360507 Cpin_4334 Chitinophaga pinensis DSM 2588 FAD-binding molybdopterin dehydrogenase YP_003123983.1 5392980 R 485918 CDS YP_003123984.1 256423331 8360508 complement(5394025..5394813) 1 NC_013132.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mrd:Mrad2831_5461 2Fe-2S iron-sulfur cluster binding domain-containing protein; (2Fe-2S)-binding domain-containing protein 5394813 8360508 Cpin_4335 Chitinophaga pinensis DSM 2588 (2Fe-2S)-binding domain-containing protein YP_003123984.1 5394025 R 485918 CDS YP_003123985.1 256423332 8360509 complement(5395183..5395938) 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: scl:sce6078 Fatty acid desaturase; fatty acid desaturase 5395938 8360509 Cpin_4336 Chitinophaga pinensis DSM 2588 fatty acid desaturase YP_003123985.1 5395183 R 485918 CDS YP_003123986.1 256423333 8360510 complement(5396076..5396501) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ank:AnaeK_2309 response regulator receiver modulated diguanylate cyclase; response regulator receiver protein 5396501 8360510 Cpin_4337 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003123986.1 5396076 R 485918 CDS YP_003123987.1 256423334 8360511 complement(5396507..5397799) 1 NC_013132.1 KEGG: amc:MADE_01275 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 5397799 8360511 Cpin_4338 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003123987.1 5396507 R 485918 CDS YP_003123988.1 256423335 8360512 complement(5397804..5398112) 1 NC_013132.1 PFAM: KaiB domain protein; KEGG: KaiB domain protein; KaiB domain-containing protein 5398112 8360512 Cpin_4339 Chitinophaga pinensis DSM 2588 KaiB domain-containing protein YP_003123988.1 5397804 R 485918 CDS YP_003123989.1 256423336 8360513 complement(5398114..5398461) 1 NC_013132.1 PFAM: KaiB domain protein; KEGG: KaiB domain protein; K08481 circadian clock protein KaiB; KaiB domain-containing protein 5398461 8360513 Cpin_4340 Chitinophaga pinensis DSM 2588 KaiB domain-containing protein YP_003123989.1 5398114 R 485918 CDS YP_003123990.1 256423337 8360514 complement(5398445..5400169) 1 NC_013132.1 acts as a promotor non-specific transcription repressor; circadian clock protein KaiC 5400169 8360514 Cpin_4341 Chitinophaga pinensis DSM 2588 circadian clock protein KaiC YP_003123990.1 5398445 R 485918 CDS YP_003123991.1 256423338 8360515 5400484..5400762 1 NC_013132.1 PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; RNA recognition, region 1; KEGG: lch:Lcho_0186 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 5400762 8360515 Cpin_4342 Chitinophaga pinensis DSM 2588 RNP-1 like RNA-binding protein YP_003123991.1 5400484 D 485918 CDS YP_003123992.1 256423339 8360516 5400823..5401089 1 NC_013132.1 hypothetical protein 5401089 8360516 Cpin_4343 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123992.1 5400823 D 485918 CDS YP_003123993.1 256423340 8360517 complement(5401145..5401540) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fph:Fphi_0487 glyoxalase family protein; bleomycin resistance protein 5401540 8360517 Cpin_4344 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003123993.1 5401145 R 485918 CDS YP_003123994.1 256423341 8360518 5401755..5402642 1 NC_013132.1 PFAM: NmrA family protein; KEGG: bba:Bd3174 nucleoside-diphosphate- sugar epimerase; NmrA family protein 5402642 8360518 Cpin_4345 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003123994.1 5401755 D 485918 CDS YP_003123995.1 256423342 8360519 5402809..5403789 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rru:Rru_A2338 AraC family transcriptional regulator; AraC family transcriptional regulator 5403789 8360519 Cpin_4346 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003123995.1 5402809 D 485918 CDS YP_003123996.1 256423343 8360520 5403913..5404980 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pol:Bpro_5550 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 5404980 8360520 Cpin_4347 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003123996.1 5403913 D 485918 CDS YP_003123997.1 256423344 8360521 5405068..5406009 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: gbm:Gbem_0506 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase GroES domain-containing protein 5406009 8360521 Cpin_4348 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003123997.1 5405068 D 485918 CDS YP_003123998.1 256423345 8360523 5408970..5413292 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; hypothetical protein; KEGG: ecx:EcHS_A2555 WGR domain-containing protein; hypothetical protein 5413292 8360523 Cpin_4350 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123998.1 5408970 D 485918 CDS YP_003123999.1 256423346 8360524 complement(5413433..5413726) 1 NC_013132.1 hypothetical protein 5413726 8360524 Cpin_4351 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003123999.1 5413433 R 485918 CDS YP_003124000.1 256423347 8360525 5413929..5414879 1 NC_013132.1 PFAM: cyclic-AMP phosphodiesterase class-II; KEGG: vfi:VF_1256 3',5'-cyclic-nucleotide phosphodiesterase; cyclic-AMP phosphodiesterase 5414879 8360525 Cpin_4352 Chitinophaga pinensis DSM 2588 cyclic-AMP phosphodiesterase YP_003124000.1 5413929 D 485918 CDS YP_003124001.1 256423348 8360526 complement(5414940..5415959) 1 NC_013132.1 KEGG: bra:BRADO4970 hypothetical protein; hypothetical protein 5415959 8360526 Cpin_4353 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124001.1 5414940 R 485918 CDS YP_003124002.1 256423349 8360527 complement(5416147..5416404) 1 NC_013132.1 hypothetical protein 5416404 8360527 Cpin_4354 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124002.1 5416147 R 485918 CDS YP_003124003.1 256423350 8360528 5416592..5417029 1 NC_013132.1 hypothetical protein 5417029 8360528 Cpin_4355 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124003.1 5416592 D 485918 CDS YP_003124004.1 256423351 8360529 5417601..5419412 1 NC_013132.1 PFAM: glycoside hydrolase family 30; KEGG: sde:Sde_2994 glucosylceramidase; glucan endo-1,6-beta-glucosidase 5419412 8360529 Cpin_4356 Chitinophaga pinensis DSM 2588 glucan endo-1,6-beta-glucosidase YP_003124004.1 5417601 D 485918 CDS YP_003124005.1 256423352 8360530 5419480..5420376 1 NC_013132.1 KEGG: bja:bll1872 hypothetical protein; hypothetical protein 5420376 8360530 Cpin_4357 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124005.1 5419480 D 485918 CDS YP_003124006.1 256423353 8360531 complement(5420386..5422188) 1 NC_013132.1 PFAM: hypothetical protein; KEGG: mms:mma_1623 diguanylate cyclase; hypothetical protein 5422188 8360531 Cpin_4358 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124006.1 5420386 R 485918 CDS YP_003124007.1 256423354 8360532 5422476..5423237 1 NC_013132.1 hypothetical protein 5423237 8360532 Cpin_4359 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124007.1 5422476 D 485918 CDS YP_003124008.1 256423355 8360533 5423434..5424126 1 NC_013132.1 hypothetical protein 5424126 8360533 Cpin_4360 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124008.1 5423434 D 485918 CDS YP_003124009.1 256423356 8360534 5424270..5424662 1 NC_013132.1 PFAM: protein of unknown function DUF336; KEGG: ret:RHE_CH02038 hypothetical protein; hypothetical protein 5424662 8360534 Cpin_4361 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124009.1 5424270 D 485918 CDS YP_003124010.1 256423357 8360535 5424700..5425512 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH02037 short chain dehydrogenase; short chain dehydrogenase 5425512 8360535 Cpin_4362 Chitinophaga pinensis DSM 2588 short chain dehydrogenase YP_003124010.1 5424700 D 485918 CDS YP_003124011.1 256423358 8360536 5425715..5426122 1 NC_013132.1 KEGG: afw:Anae109_3358 ketosteroid isomerase- related protein-like protein; ketosteroid isomerase-like protein 5426122 8360536 Cpin_4363 Chitinophaga pinensis DSM 2588 ketosteroid isomerase-like protein YP_003124011.1 5425715 D 485918 CDS YP_003124012.1 256423359 8360537 5426188..5428611 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ppd:Ppro_3010 signal transduction histidine kinase; signal transduction histidine kinase 5428611 8360537 Cpin_4364 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003124012.1 5426188 D 485918 CDS YP_003124013.1 256423360 8360538 5428626..5430041 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: pca:Pcar_2345 two component signal transduction response regulator; Fis family two component sigma-54 specific transcriptional regulator 5430041 8360538 Cpin_4365 Chitinophaga pinensis DSM 2588 Fis family two component sigma-54 specific transcriptional regulator YP_003124013.1 5428626 D 485918 CDS YP_003124014.1 256423361 8360539 complement(5430058..5430915) 1 NC_013132.1 PFAM: pirin; KEGG: hne:HNE_1491 pirin family protein; pirin 5430915 8360539 Cpin_4366 Chitinophaga pinensis DSM 2588 pirin YP_003124014.1 5430058 R 485918 CDS YP_003124015.1 256423362 8360540 complement(5430970..5431830) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 5431830 8360540 Cpin_4367 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124015.1 5430970 R 485918 CDS YP_003124016.1 256423363 8360541 complement(5432088..5434490) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 5434490 8360541 Cpin_4368 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124016.1 5432088 R 485918 CDS YP_003124017.1 256423364 8360542 5434892..5435449 1 NC_013132.1 hypothetical protein 5435449 8360542 Cpin_4369 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124017.1 5434892 D 485918 CDS YP_003124018.1 256423365 8360543 complement(5435563..5436432) 1 NC_013132.1 hypothetical protein 5436432 8360543 Cpin_4370 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124018.1 5435563 R 485918 CDS YP_003124019.1 256423366 8360544 complement(5436435..5439059) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor plug 5439059 8360544 Cpin_4371 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124019.1 5436435 R 485918 CDS YP_003124020.1 256423367 8360545 complement(5439135..5440079) 1 NC_013132.1 PFAM: FecR protein; KEGG: rru:Rru_A2396 FecR; anti-FecI sigma factor FecR 5440079 8360545 Cpin_4372 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124020.1 5439135 R 485918 CDS YP_003124021.1 256423368 8360546 complement(5440140..5440706) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bcz:BCZK1921 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 5440706 8360546 Cpin_4373 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124021.1 5440140 R 485918 CDS YP_003124022.1 256423369 8360547 complement(5441152..5441439) 1 NC_013132.1 hypothetical protein 5441439 8360547 Cpin_4374 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124022.1 5441152 R 485918 CDS YP_003124023.1 256423370 8360548 complement(5441593..5441958) 1 NC_013132.1 KEGG: mlo:mlr0480 hypothetical protein; hypothetical protein 5441958 8360548 Cpin_4375 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124023.1 5441593 R 485918 CDS YP_003124024.1 256423371 8360549 complement(5442065..5442685) 1 NC_013132.1 hypothetical protein 5442685 8360549 Cpin_4376 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124024.1 5442065 R 485918 CDS YP_003124025.1 256423372 8360551 complement(5443899..5444744) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_0499 AraC family transcriptional regulator; AraC family transcriptional regulator 5444744 8360551 Cpin_4378 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124025.1 5443899 R 485918 CDS YP_003124026.1 256423373 8360552 5444887..5445849 1 NC_013132.1 KEGG: hch:HCH_04393 hypothetical protein; hypothetical protein 5445849 8360552 Cpin_4379 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124026.1 5444887 D 485918 CDS YP_003124027.1 256423374 8360553 complement(5445897..5446811) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 5446811 8360553 Cpin_4380 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124027.1 5445897 R 485918 CDS YP_003124028.1 256423375 8360554 complement(5446836..5447582) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa0320 short chain alcohol dehydrogenase- related dehydrogenase; short-chain dehydrogenase/reductase SDR 5447582 8360554 Cpin_4381 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124028.1 5446836 R 485918 CDS YP_003124029.1 256423376 8360555 complement(5447701..5448105) 1 NC_013132.1 KEGG: maq:Maqu_2145 hypothetical protein; hypothetical protein 5448105 8360555 Cpin_4382 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124029.1 5447701 R 485918 CDS YP_003124030.1 256423377 8360556 complement(5448155..5448652) 1 NC_013132.1 KEGG: maq:Maqu_2145 hypothetical protein; hypothetical protein 5448652 8360556 Cpin_4383 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124030.1 5448155 R 485918 CDS YP_003124031.1 256423378 8360557 5448958..5449281 1 NC_013132.1 KEGG: cak:Caul_5183 hypothetical protein; hypothetical protein 5449281 8360557 Cpin_4384 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124031.1 5448958 D 485918 CDS YP_003124032.1 256423379 8360558 5449368..5450339 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU01810 methylphosphotriester-DNA alkyltransferase/transcriptional regulator; AraC family transcriptional regulator 5450339 8360558 Cpin_4385 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124032.1 5449368 D 485918 CDS YP_003124033.1 256423380 8360559 complement(5450414..5453953) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5453953 8360559 Cpin_4386 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124033.1 5450414 R 485918 CDS YP_003124034.1 256423381 8360560 complement(5453973..5457143) 1 NC_013132.1 hypothetical protein 5457143 8360560 Cpin_4387 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124034.1 5453973 R 485918 CDS YP_003124035.1 256423382 8360561 complement(5457177..5458529) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5458529 8360561 Cpin_4388 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124035.1 5457177 R 485918 CDS YP_003124036.1 256423383 8360562 5458793..5461120 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor plug 5461120 8360562 Cpin_4389 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124036.1 5458793 D 485918 CDS YP_003124037.1 256423384 8360563 5461122..5461901 1 NC_013132.1 hypothetical protein 5461901 8360563 Cpin_4390 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124037.1 5461122 D 485918 CDS YP_003124038.1 256423385 8360564 complement(5461912..5462583) 1 NC_013132.1 hypothetical protein 5462583 8360564 Cpin_4391 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124038.1 5461912 R 485918 CDS YP_003124039.1 256423386 8360565 complement(5462652..5464421) 1 NC_013132.1 KEGG: swd:Swoo_3656 hypothetical protein; alpha-galactosidase 5464421 8360565 Cpin_4392 Chitinophaga pinensis DSM 2588 alpha-galactosidase YP_003124039.1 5462652 R 485918 CDS YP_003124040.1 256423387 8360566 5464637..5464750 1 NC_013132.1 hypothetical protein 5464750 8360566 Cpin_4393 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124040.1 5464637 D 485918 CDS YP_003124041.1 256423388 8360567 5464860..5469722 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sil:SPO0571 PKD domain-containing protein; PKD domain-containing protein 5469722 8360567 Cpin_4394 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003124041.1 5464860 D 485918 CDS YP_003124042.1 256423389 8360568 complement(5469795..5470697) 1 NC_013132.1 KEGG: cps:CPS_4002 hypothetical protein; hypothetical protein 5470697 8360568 Cpin_4395 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124042.1 5469795 R 485918 CDS YP_003124043.1 256423390 8360569 complement(5470762..5475315) 1 NC_013132.1 PFAM: peptidase C19 ubiquitin carboxyl-terminal hydrolase 2; KEGG: Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase; peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 5475315 8360569 Cpin_4396 Chitinophaga pinensis DSM 2588 peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 YP_003124043.1 5470762 R 485918 CDS YP_003124044.1 256423391 8360570 complement(5475568..5475954) 1 NC_013132.1 hypothetical protein 5475954 8360570 Cpin_4397 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124044.1 5475568 R 485918 CDS YP_003124045.1 256423392 8360571 complement(5475992..5479420) 1 NC_013132.1 PFAM: PKD domain containing protein; cytochrome C class I; SMART: PKD domain containing protein; KEGG: sde:Sde_0722 Crp/Fnr family transcriptional regulator; PKD domain-containing protein 5479420 8360571 Cpin_4398 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003124045.1 5475992 R 485918 CDS YP_003124046.1 256423393 8360572 5479633..5479743 1 NC_013132.1 hypothetical protein 5479743 8360572 Cpin_4399 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124046.1 5479633 D 485918 CDS YP_003124047.1 256423394 8360573 5479725..5480498 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: scl:sce2352 hypothetical protein; NUDIX hydrolase 5480498 8360573 Cpin_4400 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003124047.1 5479725 D 485918 CDS YP_003124048.1 256423395 8360574 complement(5480508..5482694) 1 NC_013132.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mpt:Mpe_A3464 hypothetical protein; G-D-S-L family lipolytic protein 5482694 8360574 Cpin_4401 Chitinophaga pinensis DSM 2588 G-D-S-L family lipolytic protein YP_003124048.1 5480508 R 485918 CDS YP_003124049.1 256423396 8360575 complement(5483579..5485291) 1 NC_013132.1 PFAM: pseudouridine synthase; KEGG: swd:Swoo_0913 pseudouridine synthase; pseudouridine synthase 5485291 8360575 Cpin_4402 Chitinophaga pinensis DSM 2588 pseudouridine synthase YP_003124049.1 5483579 R 485918 CDS YP_003124050.1 256423397 8360576 complement(5485473..5486459) 1 NC_013132.1 KEGG: bsu:BSU39230 cell wall-associated protein precursor (CWBP200, 105, 62); hypothetical protein 5486459 8360576 Cpin_4403 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124050.1 5485473 R 485918 CDS YP_003124051.1 256423398 8360577 5486528..5487814 1 NC_013132.1 KEGG: ppr:PBPRA1982 hypothetical protein; hypothetical protein 5487814 8360577 Cpin_4404 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124051.1 5486528 D 485918 CDS YP_003124052.1 256423399 8360578 5488074..5489489 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5489489 8360578 Cpin_4405 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124052.1 5488074 D 485918 CDS YP_003124053.1 256423400 8360579 complement(5489555..5490064) 1 NC_013132.1 PFAM: cupin; KEGG: hypothetical protein; cupin 5490064 8360579 Cpin_4406 Chitinophaga pinensis DSM 2588 cupin YP_003124053.1 5489555 R 485918 CDS YP_003124054.1 256423401 8360580 complement(5490157..5490918) 1 NC_013132.1 KEGG: gbm:Gbem_1849 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 5490918 8360580 Cpin_4407 Chitinophaga pinensis DSM 2588 phosphate ABC transporter ATPase YP_003124054.1 5490157 R 485918 CDS YP_003124055.1 256423402 8360581 complement(5490911..5491753) 1 NC_013132.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_1429 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease 5491753 8360581 Cpin_4408 Chitinophaga pinensis DSM 2588 phosphate ABC transporter permease YP_003124055.1 5490911 R 485918 CDS YP_003124056.1 256423403 8360582 complement(5491753..5492643) 1 NC_013132.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1061 phosphate ABC transporter permease; phosphate ABC transporter permease 5492643 8360582 Cpin_4409 Chitinophaga pinensis DSM 2588 phosphate ABC transporter permease YP_003124056.1 5491753 R 485918 CDS YP_003124057.1 256423404 8360583 complement(5492654..5493487) 1 NC_013132.1 KEGG: afw:Anae109_0418 phosphate binding protein; phosphate binding protein 5493487 8360583 Cpin_4410 Chitinophaga pinensis DSM 2588 phosphate binding protein YP_003124057.1 5492654 R 485918 CDS YP_003124058.1 256423405 8360584 5493705..5493983 1 NC_013132.1 hypothetical protein 5493983 8360584 Cpin_4411 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124058.1 5493705 D 485918 CDS YP_003124059.1 256423406 8360585 5494338..5499146 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sil:SPO0571 PKD domain-containing protein; PKD domain-containing protein 5499146 8360585 Cpin_4412 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003124059.1 5494338 D 485918 CDS YP_003124060.1 256423407 8360586 5499335..5501404 1 NC_013132.1 KEGG: sus:Acid_3106 hypothetical protein; hypothetical protein 5501404 8360586 Cpin_4413 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124060.1 5499335 D 485918 CDS YP_003124061.1 256423408 8360587 5501485..5503404 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: sus:Acid_1808 TonB-dependent receptor; TonB-dependent receptor plug 5503404 8360587 Cpin_4414 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124061.1 5501485 D 485918 CDS YP_003124062.1 256423409 8360588 complement(5503476..5505086) 1 NC_013132.1 hypothetical protein 5505086 8360588 Cpin_4415 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124062.1 5503476 R 485918 CDS YP_003124063.1 256423410 8360589 5505487..5508477 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 5508477 8360589 Cpin_4416 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124063.1 5505487 D 485918 CDS YP_003124064.1 256423411 8360590 5508497..5510233 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5510233 8360590 Cpin_4417 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124064.1 5508497 D 485918 CDS YP_003124065.1 256423412 8360591 complement(5510560..5511798) 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 5511798 8360591 Cpin_4418 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003124065.1 5510560 R 485918 CDS YP_003124066.1 256423413 8360593 complement(5513414..5516182) 1 NC_013132.1 KEGG: met:M446_1053 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 5516182 8360593 Cpin_4420 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003124066.1 5513414 R 485918 CDS YP_003124067.1 256423414 8360595 complement(5516726..5520550) 1 NC_013132.1 PFAM: MCP methyltransferase CheR-type; CheB methylesterase; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein; KEGG: cti:RALTA_B0792 chemotaxis methyltransferase protein; contains methylesterase domain (CheB), methylase of chemotaxis methyl-accepting proteins domain (CheR), signal transduction histidine domain (NitrB), signal receiver (Rec) domain; signal transduction histidine kinase with CheB and CheR activity 5520550 8360595 Cpin_4422 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase with CheB and CheR activity YP_003124067.1 5516726 R 485918 CDS YP_003124068.1 256423415 8360596 complement(5520594..5521637) 1 NC_013132.1 PFAM: CheB methylesterase; KEGG: pna:Pnap_3575 CheB methylesterase; CheB methylesterase 5521637 8360596 Cpin_4423 Chitinophaga pinensis DSM 2588 CheB methylesterase YP_003124068.1 5520594 R 485918 CDS YP_003124069.1 256423416 8360597 complement(5521794..5522177) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nar:Saro_2281 two component transcriptional regulator; response regulator receiver protein 5522177 8360597 Cpin_4424 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003124069.1 5521794 R 485918 CDS YP_003124070.1 256423417 8360598 5522795..5522911 1 NC_013132.1 hypothetical protein 5522911 8360598 Cpin_4425 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124070.1 5522795 D 485918 CDS YP_003124071.1 256423418 8360599 5523098..5523214 1 NC_013132.1 hypothetical protein 5523214 8360599 Cpin_4426 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124071.1 5523098 D 485918 CDS YP_003124072.1 256423419 8360600 5523653..5524417 1 NC_013132.1 KEGG: GE26306 gene product from transcript GE26306- RA; hypothetical protein 5524417 8360600 Cpin_4427 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124072.1 5523653 D 485918 CDS YP_003124073.1 256423420 8360601 complement(5524729..5525124) 1 NC_013132.1 hypothetical protein 5525124 8360601 Cpin_4428 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124073.1 5524729 R 485918 CDS YP_003124074.1 256423421 8360602 complement(5525108..5525857) 1 NC_013132.1 hypothetical protein 5525857 8360602 Cpin_4429 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124074.1 5525108 R 485918 CDS YP_003124075.1 256423422 8360603 complement(5525848..5526585) 1 NC_013132.1 KEGG: aba:Acid345_4491 hypothetical protein; hypothetical protein 5526585 8360603 Cpin_4430 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124075.1 5525848 R 485918 CDS YP_003124076.1 256423423 8360604 complement(5526594..5526971) 1 NC_013132.1 hypothetical protein 5526971 8360604 Cpin_4431 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124076.1 5526594 R 485918 CDS YP_003124077.1 256423424 8360605 5527061..5527609 1 NC_013132.1 hypothetical protein 5527609 8360605 Cpin_4432 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124077.1 5527061 D 485918 CDS YP_003124078.1 256423425 8360606 complement(5527644..5528105) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vvy:VV2628 acetyltransferase; N-acetyltransferase GCN5 5528105 8360606 Cpin_4433 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003124078.1 5527644 R 485918 CDS YP_003124079.1 256423426 8360607 complement(5528163..5528933) 1 NC_013132.1 PFAM: protein of unknown function DUF72; KEGG: ank:AnaeK_0831 protein of unknown function DUF72; hypothetical protein 5528933 8360607 Cpin_4434 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124079.1 5528163 R 485918 CDS YP_003124080.1 256423427 8360608 complement(5528975..5529550) 1 NC_013132.1 hypothetical protein 5529550 8360608 Cpin_4435 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124080.1 5528975 R 485918 CDS YP_003124081.1 256423428 8360609 complement(5529588..5530454) 1 NC_013132.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet2880 LysR family transcriptional regulator; LysR family transcriptional regulator 5530454 8360609 Cpin_4436 Chitinophaga pinensis DSM 2588 LysR family transcriptional regulator YP_003124081.1 5529588 R 485918 CDS YP_003124082.1 256423429 8360610 5530554..5531747 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppw:PputW619_2449 major facilitator transporter; major facilitator superfamily protein 5531747 8360610 Cpin_4437 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003124082.1 5530554 D 485918 CDS YP_003124083.1 256423430 8360611 5531731..5532243 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein; N-acetyltransferase GCN5 5532243 8360611 Cpin_4438 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003124083.1 5531731 D 485918 CDS YP_003124084.1 256423431 8360612 5532364..5533896 1 NC_013132.1 PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: ADD1.2; ATP-dependent DNA helicase; K01152 type I restriction enzyme; type III restriction protein res subunit 5533896 8360612 Cpin_4439 Chitinophaga pinensis DSM 2588 type III restriction protein res subunit YP_003124084.1 5532364 D 485918 CDS YP_003124085.1 256423432 8360613 complement(5533897..5534100) 1 NC_013132.1 hypothetical protein 5534100 8360613 Cpin_4440 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124085.1 5533897 R 485918 CDS YP_003124086.1 256423433 8360614 5534342..5535496 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: mch:Mchl_3368 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase GroES domain-containing protein 5535496 8360614 Cpin_4441 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003124086.1 5534342 D 485918 CDS YP_003124087.1 256423434 8360615 5535508..5535999 1 NC_013132.1 KEGG: mch:Mchl_3369 hypothetical protein; hypothetical protein 5535999 8360615 Cpin_4442 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124087.1 5535508 D 485918 CDS YP_003124088.1 256423435 8360616 5536111..5536863 1 NC_013132.1 KEGG: xop:PXO_00038 hypothetical protein; hypothetical protein 5536863 8360616 Cpin_4443 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124088.1 5536111 D 485918 CDS YP_003124089.1 256423436 8360617 5536987..5537847 1 NC_013132.1 PFAM: YCII-related; KEGG: saz:Sama_1725 hypothetical protein; hypothetical protein 5537847 8360617 Cpin_4444 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124089.1 5536987 D 485918 CDS YP_003124090.1 256423437 8360618 5538144..5539022 1 NC_013132.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: gbm:Gbem_1200 extradiol ring-cleavage dioxygenase class III protein subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 5539022 8360618 Cpin_4445 Chitinophaga pinensis DSM 2588 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003124090.1 5538144 D 485918 CDS YP_003124091.1 256423438 8360619 complement(5539109..5540275) 1 NC_013132.1 PFAM: protein of unknown function DUF323; KEGG: pmy:Pmen_4037 hypothetical protein; hypothetical protein 5540275 8360619 Cpin_4446 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124091.1 5539109 R 485918 CDS YP_003124092.1 256423439 8360620 complement(5540284..5541264) 1 NC_013132.1 TIGRFAM: methyltransferase; KEGG: swd:Swoo_2444 hypothetical protein; methyltransferase 5541264 8360620 Cpin_4447 Chitinophaga pinensis DSM 2588 methyltransferase YP_003124092.1 5540284 R 485918 CDS YP_003124093.1 256423440 8360621 complement(5541276..5542250) 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: NADPH:quinone reductase and related Zn- dependent oxidoreductases; alcohol dehydrogenase zinc-binding domain-containing protein 5542250 8360621 Cpin_4448 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003124093.1 5541276 R 485918 CDS YP_003124094.1 256423441 8360622 complement(5542265..5542657) 1 NC_013132.1 KEGG: swp:swp_3501 ketosteroid isomerase-like protein; hypothetical protein 5542657 8360622 Cpin_4449 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124094.1 5542265 R 485918 CDS YP_003124095.1 256423442 8360623 5543012..5543911 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcb:BCB4264_A3769 transporter, drug/metabolite exporter family; hypothetical protein 5543911 8360623 Cpin_4450 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124095.1 5543012 D 485918 CDS YP_003124096.1 256423443 8360624 5543914..5544453 1 NC_013132.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: aha:AHA_2106 YbaK/prolyl-tRNA synthetase domain-containing protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 5544453 8360624 Cpin_4451 Chitinophaga pinensis DSM 2588 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_003124096.1 5543914 D 485918 CDS YP_003124097.1 256423444 8360625 complement(5544535..5546073) 1 NC_013132.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: ppd:Ppro_2208 sulphate transporter; sulfate transporter 5546073 8360625 Cpin_4452 Chitinophaga pinensis DSM 2588 sulfate transporter YP_003124097.1 5544535 R 485918 CDS YP_003124098.1 256423445 8360626 complement(5546284..5546871) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 5546871 8360626 Cpin_4453 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003124098.1 5546284 R 485918 CDS YP_003124099.1 256423446 8360627 5547033..5547563 1 NC_013132.1 PFAM: DinB family protein; KEGG: sus:Acid_7400 DinB family protein; DinB family protein 5547563 8360627 Cpin_4454 Chitinophaga pinensis DSM 2588 DinB family protein YP_003124099.1 5547033 D 485918 CDS YP_003124100.1 256423447 8360628 5548106..5549146 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: mlo:mll1975 cinnamoyl-CoA reductase; NAD-dependent epimerase/dehydratase 5549146 8360628 Cpin_4455 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003124100.1 5548106 D 485918 CDS YP_003124101.1 256423448 8360629 5549143..5549928 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 5549928 8360629 Cpin_4456 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124101.1 5549143 D 485918 CDS YP_003124102.1 256423449 8360631 5550250..5550609 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5550609 8360631 Cpin_4458 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124102.1 5550250 D 485918 CDS YP_003124103.1 256423450 8360633 5551872..5552909 1 NC_013132.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: swp:swp_4142 probable cytochrome-c peroxidase; cytochrome C peroxidase 5552909 8360633 Cpin_4460 Chitinophaga pinensis DSM 2588 cytochrome C peroxidase YP_003124103.1 5551872 D 485918 CDS YP_003124104.1 256423451 8360634 5552924..5553850 1 NC_013132.1 hypothetical protein 5553850 8360634 Cpin_4461 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124104.1 5552924 D 485918 CDS YP_003124105.1 256423452 8360635 complement(5553847..5554662) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 5554662 8360635 Cpin_4462 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124105.1 5553847 R 485918 CDS YP_003124106.1 256423453 8360636 complement(5554733..5555758) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase; short-chain dehydrogenase/reductase SDR 5555758 8360636 Cpin_4463 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124106.1 5554733 R 485918 CDS YP_003124107.1 256423454 8360637 complement(5555920..5556351) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5556351 8360637 Cpin_4464 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124107.1 5555920 R 485918 CDS YP_003124108.1 256423455 8360638 complement(5556505..5556867) 1 NC_013132.1 KEGG: gdj:Gdia_1062 hypothetical protein; hypothetical protein 5556867 8360638 Cpin_4465 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124108.1 5556505 R 485918 CDS YP_003124109.1 256423456 8360639 complement(5557094..5558386) 1 NC_013132.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: sew:SeSA_A2204 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 5558386 8360639 Cpin_4466 Chitinophaga pinensis DSM 2588 cobyrinic acid a,c-diamide synthase YP_003124109.1 5557094 R 485918 CDS YP_003124110.1 256423457 8360640 5558437..5559894 1 NC_013132.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 5559894 8360640 Cpin_4467 Chitinophaga pinensis DSM 2588 cobyric acid synthase YP_003124110.1 5558437 D 485918 CDS YP_003124111.1 256423458 8360641 5559891..5560919 1 NC_013132.1 PFAM: aminotransferase class I and II; KEGG: gbm:Gbem_3537 L-threonine-O-3-phosphate decarboxylase; class I and II aminotransferase 5560919 8360641 Cpin_4468 Chitinophaga pinensis DSM 2588 class I and II aminotransferase YP_003124111.1 5559891 D 485918 CDS YP_003124112.1 256423459 8360642 5560898..5561851 1 NC_013132.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: kpn:KPN_03199 cobalamin biosynthesis protein; cobalamin biosynthesis protein CobD 5561851 8360642 Cpin_4469 Chitinophaga pinensis DSM 2588 cobalamin biosynthesis protein CobD YP_003124112.1 5560898 D 485918 CDS YP_003124113.1 256423460 8360643 5562247..5562612 1 NC_013132.1 KEGG: bha:BH0367 hypothetical protein; hypothetical protein 5562612 8360643 Cpin_4470 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124113.1 5562247 D 485918 CDS YP_003124114.1 256423461 8360644 5562624..5563448 1 NC_013132.1 KEGG: rme:Rmet_1533 high-affinity nickel- transporter; nickel permease 5563448 8360644 Cpin_4471 Chitinophaga pinensis DSM 2588 nickel permease YP_003124114.1 5562624 D 485918 CDS YP_003124115.1 256423462 8360645 5563463..5564305 1 NC_013132.1 KEGG: vfi:VF_1388 epimerase; epimerase 5564305 8360645 Cpin_4472 Chitinophaga pinensis DSM 2588 epimerase YP_003124115.1 5563463 D 485918 CDS YP_003124116.1 256423463 8360646 5564302..5565231 1 NC_013132.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: hch:HCH_06472 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 5565231 8360646 Cpin_4473 Chitinophaga pinensis DSM 2588 cobalamin (vitamin B12) biosynthesis CbiX protein YP_003124116.1 5564302 D 485918 CDS YP_003124117.1 256423464 8360647 5565235..5565942 1 NC_013132.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mca:MCA2295 precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 5565942 8360647 Cpin_4474 Chitinophaga pinensis DSM 2588 precorrin-2 C(20)-methyltransferase YP_003124117.1 5565235 D 485918 CDS YP_003124118.1 256423465 8360648 5565939..5567294 1 NC_013132.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: precorrin-8X methylmutase CbiC/CobH; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: vsp:VS_2667 precorrin-3B methylase CobJ; precorrin-3B C(17)-methyltransferase 5567294 8360648 Cpin_4475 Chitinophaga pinensis DSM 2588 precorrin-3B C(17)-methyltransferase YP_003124118.1 5565939 D 485918 CDS YP_003124119.1 256423466 8360649 5567294..5568481 1 NC_013132.1 KEGG: gme:Gmet_0481 precorrin-6Y C5,15- methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15- methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 5568481 8360649 Cpin_4476 Chitinophaga pinensis DSM 2588 precorrin-6y C5,15-methyltransferase subunit CbiE YP_003124119.1 5567294 D 485918 CDS YP_003124120.1 256423467 8360650 5568483..5570315 1 NC_013132.1 KEGG: sfu:Sfum_2129 precorrin-4 C11- methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 5570315 8360650 Cpin_4477 Chitinophaga pinensis DSM 2588 precorrin-4 C(11)-methyltransferase YP_003124120.1 5568483 D 485918 CDS YP_003124121.1 256423468 8360651 5570315..5571073 1 NC_013132.1 PFAM: precorrin-6x reductase CbiJ/CobK; KEGG: yen:YE2717 cobalt-precorrin-6x reductase; precorrin-6x reductase CbiJ/CobK 5571073 8360651 Cpin_4478 Chitinophaga pinensis DSM 2588 precorrin-6x reductase CbiJ/CobK YP_003124121.1 5570315 D 485918 CDS YP_003124122.1 256423469 8360652 5571070..5572152 1 NC_013132.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: pen:PSEEN4873 cobalt-precorrin-6A synthase; cobalamin biosynthesis protein CbiD 5572152 8360652 Cpin_4479 Chitinophaga pinensis DSM 2588 cobalamin biosynthesis protein CbiD YP_003124122.1 5571070 D 485918 CDS YP_003124123.1 256423470 8360653 5572154..5572849 1 NC_013132.1 KEGG: mpt:Mpe_A3299 urease accessory protein; hypothetical protein 5572849 8360653 Cpin_4480 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124123.1 5572154 D 485918 CDS YP_003124124.1 256423471 8360654 5572861..5573805 1 NC_013132.1 KEGG: pfo:Pfl01_3097 protoporphyrin IX magnesium- chelatase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; magnesium chelatase 5573805 8360654 Cpin_4481 Chitinophaga pinensis DSM 2588 magnesium chelatase YP_003124124.1 5572861 D 485918 CDS YP_003124125.1 256423472 8360655 5573865..5574545 1 NC_013132.1 SMART: von Willebrand factor type A; KEGG: rso:RS03742 chelatase protein; von Willebrand factor type A 5574545 8360655 Cpin_4482 Chitinophaga pinensis DSM 2588 von Willebrand factor type A YP_003124125.1 5573865 D 485918 CDS YP_003124126.1 256423473 8360656 5574647..5575150 1 NC_013132.1 PFAM: cobalbumin biosynthesis protein; KEGG: mmw:Mmwyl1_3675 adenosylcobinamide-phosphate guanylyltransferase; cobalbumin biosynthesis protein 5575150 8360656 Cpin_4483 Chitinophaga pinensis DSM 2588 cobalbumin biosynthesis protein YP_003124126.1 5574647 D 485918 CDS YP_003124127.1 256423474 8360657 5575174..5576214 1 NC_013132.1 KEGG: dar:Daro_0148 nicotinate-nucleotide-- dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazolep hosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 5576214 8360657 Cpin_4484 Chitinophaga pinensis DSM 2588 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_003124127.1 5575174 D 485918 CDS YP_003124128.1 256423475 8360658 5576217..5577020 1 NC_013132.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: dar:Daro_0149 cobalamin synthase; cobalamin-5-phosphate synthase CobS 5577020 8360658 Cpin_4485 Chitinophaga pinensis DSM 2588 cobalamin-5-phosphate synthase CobS YP_003124128.1 5576217 D 485918 CDS YP_003124129.1 256423476 8360659 5577005..5577529 1 NC_013132.1 PFAM: phosphoglycerate mutase; KEGG: dar:Daro_0151 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase 5577529 8360659 Cpin_4486 Chitinophaga pinensis DSM 2588 phosphoglycerate mutase YP_003124129.1 5577005 D 485918 CDS YP_003124130.1 256423477 8360660 5577737..5578315 1 NC_013132.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mxa:MXAN_5941 ATP:cob(I)alamin adenosyltransferase; ATP/cobalamin adenosyltransferase 5578315 8360660 Cpin_4487 Chitinophaga pinensis DSM 2588 ATP/cobalamin adenosyltransferase YP_003124130.1 5577737 D 485918 CDS YP_003124131.1 256423478 8360661 complement(5578317..5582078) 1 NC_013132.1 KEGG: pst:PSPTO_3149 cobaltochelatase; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase subunit CobN 5582078 8360661 Cpin_4488 Chitinophaga pinensis DSM 2588 cobaltochelatase subunit CobN YP_003124131.1 5578317 R 485918 CDS YP_003124132.1 256423479 8360662 complement(5582086..5583132) 1 NC_013132.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bmc:BAbS19_I12400 dynamin; cobalamin biosynthesis protein CobW 5583132 8360662 Cpin_4489 Chitinophaga pinensis DSM 2588 cobalamin biosynthesis protein CobW YP_003124132.1 5582086 R 485918 CDS YP_003124133.1 256423480 8360663 5583544..5585064 1 NC_013132.1 KEGG: bur:Bcep18194_C6674 hypothetical protein; hypothetical protein 5585064 8360663 Cpin_4490 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124133.1 5583544 D 485918 CDS YP_003124134.1 256423481 8360664 5585088..5587451 1 NC_013132.1 KEGG: bur:Bcep18194_C6675 hypothetical protein; hypothetical protein 5587451 8360664 Cpin_4491 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124134.1 5585088 D 485918 CDS YP_003124135.1 256423482 8360665 5587451..5588833 1 NC_013132.1 PFAM: Radical SAM domain protein; KEGG: bur:Bcep18194_C6677 radical SAM family protein; radical SAM protein 5588833 8360665 Cpin_4492 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003124135.1 5587451 D 485918 CDS YP_003124136.1 256423483 8360666 5588850..5590316 1 NC_013132.1 PFAM: monooxygenase FAD-binding; tryptophan halogenase; KEGG: bur:Bcep18194_C6678 tryptophan halogenase; FAD-binding monooxygenase 5590316 8360666 Cpin_4493 Chitinophaga pinensis DSM 2588 FAD-binding monooxygenase YP_003124136.1 5588850 D 485918 CDS YP_003124137.1 256423484 8360667 5590464..5592818 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sde:Sde_0330 acetylornithine deacetylase ArgE; hypothetical protein 5592818 8360667 Cpin_4494 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124137.1 5590464 D 485918 CDS YP_003124138.1 256423485 8360668 complement(5592879..5595419) 1 NC_013132.1 KEGG: sus:Acid_7167 hypothetical protein; hypothetical protein 5595419 8360668 Cpin_4495 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124138.1 5592879 R 485918 CDS YP_003124139.1 256423486 8360669 complement(5595439..5596809) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5596809 8360669 Cpin_4496 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124139.1 5595439 R 485918 CDS YP_003124140.1 256423487 8360670 complement(5596822..5600418) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 5600418 8360670 Cpin_4497 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124140.1 5596822 R 485918 CDS YP_003124141.1 256423488 8360671 complement(5600626..5601810) 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1453 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 5601810 8360671 Cpin_4498 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124141.1 5600626 R 485918 CDS YP_003124142.1 256423489 8360672 complement(5601859..5602449) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bra:BRADO2612 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 5602449 8360672 Cpin_4499 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124142.1 5601859 R 485918 CDS YP_003124143.1 256423490 8360673 complement(5602681..5603121) 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: abc:ACICU_00957 hypothetical protein; activator of Hsp90 ATPase 1 family protein 5603121 8360673 Cpin_4500 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003124143.1 5602681 R 485918 CDS YP_003124144.1 256423491 8360674 complement(5603425..5604375) 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: pat:Patl_0810 carbohydrate-binding family 6 protein; alpha-N-arabinofuranosidase 5604375 8360674 Cpin_4501 Chitinophaga pinensis DSM 2588 alpha-N-arabinofuranosidase YP_003124144.1 5603425 R 485918 CDS YP_003124145.1 256423492 8360675 complement(5604398..5605105) 1 NC_013132.1 hypothetical protein 5605105 8360675 Cpin_4502 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124145.1 5604398 R 485918 CDS YP_003124146.1 256423493 8360676 complement(5605122..5606945) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5606945 8360676 Cpin_4503 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124146.1 5605122 R 485918 CDS YP_003124147.1 256423494 8360677 complement(5606957..5610181) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 5610181 8360677 Cpin_4504 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124147.1 5606957 R 485918 CDS YP_003124148.1 256423495 8360678 complement(5611428..5614118) 1 NC_013132.1 KEGG: hypothetical protein; response regulator receiver and SARP domain-containing protein 5614118 8360678 Cpin_4505 Chitinophaga pinensis DSM 2588 response regulator receiver and SARP domain-containing protein YP_003124148.1 5611428 R 485918 CDS YP_003124149.1 256423496 8360679 complement(5614139..5617630) 1 NC_013132.1 KEGG: pne:Pnec_1144 hypothetical protein; hypothetical protein 5617630 8360679 Cpin_4506 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124149.1 5614139 R 485918 CDS YP_003124150.1 256423497 8360680 complement(5617901..5620933) 1 NC_013132.1 KEGG: rme:Rmet_1657 conserved hypothetical protein- transmembrane prediction; hypothetical protein 5620933 8360680 Cpin_4507 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124150.1 5617901 R 485918 CDS YP_003124151.1 256423498 8360681 complement(5621108..5621749) 1 NC_013132.1 hypothetical protein 5621749 8360681 Cpin_4508 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124151.1 5621108 R 485918 CDS YP_003124152.1 256423499 8360682 5621851..5622138 1 NC_013132.1 hypothetical protein 5622138 8360682 Cpin_4509 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124152.1 5621851 D 485918 CDS YP_003124153.1 256423500 8360683 5622171..5622329 1 NC_013132.1 hypothetical protein 5622329 8360683 Cpin_4510 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124153.1 5622171 D 485918 CDS YP_003124154.1 256423501 8360684 complement(5622371..5624038) 1 NC_013132.1 PFAM: beta-lactamase; glycoside hydrolase family 13 domain protein; hypothetical protein; KEGG: aba:Acid345_0612 beta-lactamase; beta-lactamase 5624038 8360684 Cpin_4511 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003124154.1 5622371 R 485918 CDS YP_003124155.1 256423502 8360685 complement(5624200..5625288) 1 NC_013132.1 PFAM: major royal jelly protein; KEGG: pfo:Pfl01_2714 hypothetical protein; hypothetical protein 5625288 8360685 Cpin_4512 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124155.1 5624200 R 485918 CDS YP_003124156.1 256423503 8360686 complement(5625493..5625807) 1 NC_013132.1 hypothetical protein 5625807 8360686 Cpin_4513 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124156.1 5625493 R 485918 CDS YP_003124157.1 256423504 8360687 complement(5625800..5627536) 1 NC_013132.1 hypothetical protein 5627536 8360687 Cpin_4514 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124157.1 5625800 R 485918 CDS YP_003124158.1 256423505 8360688 complement(5627556..5628785) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5628785 8360688 Cpin_4515 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124158.1 5627556 R 485918 CDS YP_003124159.1 256423506 8360689 complement(5628787..5632371) 1 NC_013132.1 hypothetical protein 5632371 8360689 Cpin_4516 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124159.1 5628787 R 485918 CDS YP_003124160.1 256423507 8360690 complement(5632383..5633897) 1 NC_013132.1 hypothetical protein 5633897 8360690 Cpin_4517 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124160.1 5632383 R 485918 CDS YP_003124161.1 256423508 8360691 complement(5633919..5634290) 1 NC_013132.1 hypothetical protein 5634290 8360691 Cpin_4518 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124161.1 5633919 R 485918 CDS YP_003124162.1 256423509 8360692 complement(5634297..5635592) 1 NC_013132.1 hypothetical protein 5635592 8360692 Cpin_4519 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124162.1 5634297 R 485918 CDS YP_003124163.1 256423510 8360693 complement(5635887..5636258) 1 NC_013132.1 KEGG: pol:Bpro_2643 hypothetical protein; hypothetical protein 5636258 8360693 Cpin_4520 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124163.1 5635887 R 485918 CDS YP_003124164.1 256423511 8360694 5636370..5637107 1 NC_013132.1 PFAM: ROK family protein; KEGG: gbe:GbCGDNIH1_0537 polyphosphate glucokinase; ROK family protein 5637107 8360694 Cpin_4521 Chitinophaga pinensis DSM 2588 ROK family protein YP_003124164.1 5636370 D 485918 CDS YP_003124165.1 256423512 8360695 complement(5637180..5638496) 1 NC_013132.1 KEGG: mxa:MXAN_4747 lipoprotein; lipoprotein 5638496 8360695 Cpin_4522 Chitinophaga pinensis DSM 2588 lipoprotein YP_003124165.1 5637180 R 485918 CDS YP_003124166.1 256423513 8360696 complement(5638528..5641524) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 5641524 8360696 Cpin_4523 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003124166.1 5638528 R 485918 CDS YP_003124167.1 256423514 8360697 5641569..5641943 1 NC_013132.1 hypothetical protein 5641943 8360697 Cpin_4524 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124167.1 5641569 D 485918 CDS YP_003124168.1 256423515 8360698 complement(5642090..5642452) 1 NC_013132.1 hypothetical protein 5642452 8360698 Cpin_4525 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124168.1 5642090 R 485918 CDS YP_003124169.1 256423516 8360699 5642912..5644045 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 5644045 8360699 Cpin_4526 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003124169.1 5642912 D 485918 CDS YP_003124170.1 256423517 8360700 complement(5644335..5646275) 1 NC_013132.1 KEGG: rlt:Rleg2_5337 heparinase II/III family protein; heparinase II/III family protein 5646275 8360700 Cpin_4527 Chitinophaga pinensis DSM 2588 heparinase II/III family protein YP_003124170.1 5644335 R 485918 CDS YP_003124171.1 256423518 8360701 complement(5646288..5647496) 1 NC_013132.1 KEGG: afw:Anae109_3266 hypothetical protein; hypothetical protein 5647496 8360701 Cpin_4528 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124171.1 5646288 R 485918 CDS YP_003124172.1 256423519 8360702 complement(5647513..5648490) 1 NC_013132.1 hypothetical protein 5648490 8360702 Cpin_4529 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124172.1 5647513 R 485918 CDS YP_003124173.1 256423520 8360703 complement(5648515..5648943) 1 NC_013132.1 hypothetical protein 5648943 8360703 Cpin_4530 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124173.1 5648515 R 485918 CDS YP_003124174.1 256423521 8360704 complement(5648934..5650778) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5650778 8360704 Cpin_4531 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124174.1 5648934 R 485918 CDS YP_003124175.1 256423522 8360705 complement(5650790..5653951) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 5653951 8360705 Cpin_4532 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124175.1 5650790 R 485918 CDS YP_003124176.1 256423523 8360706 5655499..5656095 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator; TetR family transcriptional regulator 5656095 8360706 Cpin_4533 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003124176.1 5655499 D 485918 CDS YP_003124177.1 256423524 8360707 5656162..5657202 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: eca:ECA3293 oxidoreductase; aldo/keto reductase 5657202 8360707 Cpin_4534 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003124177.1 5656162 D 485918 CDS YP_003124178.1 256423525 8360708 5657312..5658790 1 NC_013132.1 PFAM: carboxylesterase type B; KEGG: scl:sce4709 carboxylesterase; carboxylesterase 5658790 8360708 Cpin_4535 Chitinophaga pinensis DSM 2588 carboxylesterase YP_003124178.1 5657312 D 485918 CDS YP_003124179.1 256423526 8360709 5658895..5659734 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: pol:Bpro_1382 alpha/beta hydrolase; alpha/beta hydrolase 5659734 8360709 Cpin_4536 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003124179.1 5658895 D 485918 CDS YP_003124180.1 256423527 8360710 complement(5660365..5660958) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator; TetR family transcriptional regulator 5660958 8360710 Cpin_4537 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003124180.1 5660365 R 485918 CDS YP_003124181.1 256423528 8360711 5661245..5662099 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bxe:Bxe_B0550 alpha/beta family hydrolase; alpha/beta hydrolase 5662099 8360711 Cpin_4538 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003124181.1 5661245 D 485918 CDS YP_003124182.1 256423529 8360712 complement(5662191..5665286) 1 NC_013132.1 PFAM: AsmA family protein; KEGG: hypothetical protein; AsmA family protein 5665286 8360712 Cpin_4539 Chitinophaga pinensis DSM 2588 AsmA family protein YP_003124182.1 5662191 R 485918 CDS YP_003124183.1 256423530 8360713 5665427..5665942 1 NC_013132.1 KEGG: similar to glycoamidase gene; hypothetical protein 5665942 8360713 Cpin_4540 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124183.1 5665427 D 485918 CDS YP_003124184.1 256423531 8360714 5666131..5666676 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: scl:sce7221 ECF family RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 5666676 8360714 Cpin_4541 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124184.1 5666131 D 485918 CDS YP_003124185.1 256423532 8360715 5666685..5668478 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5668478 8360715 Cpin_4542 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124185.1 5666685 D 485918 CDS YP_003124186.1 256423533 8360716 5668540..5669715 1 NC_013132.1 PFAM: aminotransferase class V; KEGG: smd:Smed_1213 aminotransferase class V; class V aminotransferase 5669715 8360716 Cpin_4543 Chitinophaga pinensis DSM 2588 class V aminotransferase YP_003124186.1 5668540 D 485918 CDS YP_003124187.1 256423534 8360717 5669908..5676000 1 NC_013132.1 KEGG: lpc:LPC_2635 hypothetical protein; hypothetical protein 5676000 8360717 Cpin_4544 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124187.1 5669908 D 485918 CDS YP_003124188.1 256423535 8360718 complement(5676081..5678399) 1 NC_013132.1 KEGG: sde:Sde_0569 hypothetical protein; hypothetical protein 5678399 8360718 Cpin_4545 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124188.1 5676081 R 485918 CDS YP_003124189.1 256423536 8360719 5678746..5679342 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; regulatory protein LuxR; KEGG: bja:blr3042 RNA polymerase sigma factor; LuxR family transcriptional regulator 5679342 8360719 Cpin_4546 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003124189.1 5678746 D 485918 CDS YP_003124190.1 256423537 8360720 5679426..5680559 1 NC_013132.1 PFAM: FecR protein; KEGG: rru:Rru_A1439 FecR; anti-FecI sigma factor FecR 5680559 8360720 Cpin_4547 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124190.1 5679426 D 485918 CDS YP_003124191.1 256423538 8360721 5680683..5684012 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 5684012 8360721 Cpin_4548 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124191.1 5680683 D 485918 CDS YP_003124192.1 256423539 8360722 5684024..5685454 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 5685454 8360722 Cpin_4549 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124192.1 5684024 D 485918 CDS YP_003124193.1 256423540 8360723 5685479..5686942 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hch:HCH_02597 thiol-disulfide isomerase and thioredoxins; alkyl hydroperoxide reductase 5686942 8360723 Cpin_4550 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003124193.1 5685479 D 485918 CDS YP_003124194.1 256423541 8360724 complement(5687009..5687635) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sat:SYN_00775 two-component response regulator; LuxR family transcriptional regulator 5687635 8360724 Cpin_4551 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003124194.1 5687009 R 485918 CDS YP_003124195.1 256423542 8360725 complement(5687640..5689856) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: hch:HCH_00418 signal transduction histidine kinase; histidine kinase 5689856 8360725 Cpin_4552 Chitinophaga pinensis DSM 2588 histidine kinase YP_003124195.1 5687640 R 485918 CDS YP_003124196.1 256423543 8360726 5689994..5690650 1 NC_013132.1 KEGG: sbo:SBO_0509 hypothetical protein; hypothetical protein 5690650 8360726 Cpin_4553 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124196.1 5689994 D 485918 CDS YP_003124197.1 256423544 8360727 5690811..5691488 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5691488 8360727 Cpin_4554 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124197.1 5690811 D 485918 CDS YP_003124198.1 256423545 8360728 5691490..5693373 1 NC_013132.1 hypothetical protein 5693373 8360728 Cpin_4555 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124198.1 5691490 D 485918 CDS YP_003124199.1 256423546 8360729 complement(5693602..5695434) 1 NC_013132.1 PFAM: glycoside hydrolase family 35; glycoside hydrolase family 42 domain protein; KEGG: xca:xccb100_1257 exported beta-galactosidase; beta-galactosidase 5695434 8360729 Cpin_4556 Chitinophaga pinensis DSM 2588 beta-galactosidase YP_003124199.1 5693602 R 485918 CDS YP_003124200.1 256423547 8360730 complement(5695445..5696929) 1 NC_013132.1 KEGG: scl:sce0966 hypothetical protein; O-glycosyl hydrolase-like protein 5696929 8360730 Cpin_4557 Chitinophaga pinensis DSM 2588 O-glycosyl hydrolase-like protein YP_003124200.1 5695445 R 485918 CDS YP_003124201.1 256423548 8360731 complement(5696931..5698598) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5698598 8360731 Cpin_4558 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124201.1 5696931 R 485918 CDS YP_003124202.1 256423549 8360732 complement(5698617..5701718) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 5701718 8360732 Cpin_4559 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003124202.1 5698617 R 485918 CDS YP_003124203.1 256423550 8360733 complement(5701862..5705803) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; helix- turn-helix- domain containing protein AraC type; histidine kinase A domain protein; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein; histidine kinase 5705803 8360733 Cpin_4560 Chitinophaga pinensis DSM 2588 histidine kinase YP_003124203.1 5701862 R 485918 CDS YP_003124204.1 256423551 8360734 complement(5705919..5707799) 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: eta:ETA_27190 O-antigen acetylase; acyltransferase 3 5707799 8360734 Cpin_4561 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003124204.1 5705919 R 485918 CDS YP_003124205.1 256423552 8360735 5708012..5708905 1 NC_013132.1 PFAM: dienelactone hydrolase; BAAT/acyl-CoA thioester hydrolase; KEGG: rec:RHECIAT_PA0000292 probable dienelactone hydrolase protein; carboxymethylenebutenolidase 5708905 8360735 Cpin_4562 Chitinophaga pinensis DSM 2588 carboxymethylenebutenolidase YP_003124205.1 5708012 D 485918 CDS YP_003124206.1 256423553 8360736 complement(5708988..5709740) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_0755 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5709740 8360736 Cpin_4563 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124206.1 5708988 R 485918 CDS YP_003124207.1 256423554 8360737 complement(5709911..5710663) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rlt:Rleg2_0435 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5710663 8360737 Cpin_4564 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124207.1 5709911 R 485918 CDS YP_003124208.1 256423555 8360738 complement(5710750..5711343) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 5711343 8360738 Cpin_4565 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003124208.1 5710750 R 485918 CDS YP_003124209.1 256423556 8360739 5711393..5712589 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: acyltransferase family protein; acyltransferase 3 5712589 8360739 Cpin_4566 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003124209.1 5711393 D 485918 CDS YP_003124210.1 256423557 8360740 5712637..5713167 1 NC_013132.1 KEGG: sun:SUN_0739 hypothetical protein; hypothetical protein 5713167 8360740 Cpin_4567 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124210.1 5712637 D 485918 CDS YP_003124211.1 256423558 8360741 complement(5713169..5714104) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bce:BC2171 proline iminopeptidase; alpha/beta hydrolase 5714104 8360741 Cpin_4568 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003124211.1 5713169 R 485918 CDS YP_003124212.1 256423559 8360742 complement(5714157..5714747) 1 NC_013132.1 hypothetical protein 5714747 8360742 Cpin_4569 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124212.1 5714157 R 485918 CDS YP_003124213.1 256423560 8360743 5714985..5715305 1 NC_013132.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hch:HCH_03203 transcriptional regulator; ArsR family transcriptional regulator 5715305 8360743 Cpin_4570 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003124213.1 5714985 D 485918 CDS YP_003124214.1 256423561 8360744 5715302..5716270 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; 3- demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hch:HCH_03204 hypothetical protein; activator of Hsp90 ATPase 1 family protein 5716270 8360744 Cpin_4571 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003124214.1 5715302 D 485918 CDS YP_003124215.1 256423562 8360745 5716360..5717244 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: sus:Acid_5130 beta-lactamase domain- containing protein; beta-lactamase 5717244 8360745 Cpin_4572 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003124215.1 5716360 D 485918 CDS YP_003124216.1 256423563 8360746 complement(5717359..5718201) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_0589 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5718201 8360746 Cpin_4573 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124216.1 5717359 R 485918 CDS YP_003124217.1 256423564 8360747 complement(5718407..5719489) 1 NC_013132.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mxa:MXAN_2267 oxidoreductase, 2-nitropropane dioxygenase family; 2-nitropropane dioxygenase 5719489 8360747 Cpin_4574 Chitinophaga pinensis DSM 2588 2-nitropropane dioxygenase YP_003124217.1 5718407 R 485918 CDS YP_003124218.1 256423565 8360748 complement(5719497..5719949) 1 NC_013132.1 KEGG: cps:CPS_2672 hypothetical protein; hypothetical protein 5719949 8360748 Cpin_4575 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124218.1 5719497 R 485918 CDS YP_003124219.1 256423566 8360749 complement(5719952..5720686) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: scl:sce0991 dehydrogenase with different specifities; short-chain dehydrogenase/reductase SDR 5720686 8360749 Cpin_4576 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124219.1 5719952 R 485918 CDS YP_003124220.1 256423567 8360750 complement(5720724..5720942) 1 NC_013132.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: har:HEAR3241 tautomerase K2; 4-oxalocrotonate tautomerase 5720942 8360750 Cpin_4577 Chitinophaga pinensis DSM 2588 4-oxalocrotonate tautomerase YP_003124220.1 5720724 R 485918 CDS YP_003124221.1 256423568 8360751 complement(5720969..5721487) 1 NC_013132.1 PFAM: YceI family protein; KEGG: bba:Bd2001 YCE I like family protein; hypothetical protein 5721487 8360751 Cpin_4578 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124221.1 5720969 R 485918 CDS YP_003124222.1 256423569 8360752 complement(5721592..5722179) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 5722179 8360752 Cpin_4579 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003124222.1 5721592 R 485918 CDS YP_003124223.1 256423570 8360753 5722338..5726543 1 NC_013132.1 TIGRFAM: hypothetical protein; PFAM: hypothetical protein; KEGG: hch:HCH_03533 rhs family protein; hypothetical protein 5726543 8360753 Cpin_4580 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124223.1 5722338 D 485918 CDS YP_003124224.1 256423571 8360754 5726545..5726934 1 NC_013132.1 hypothetical protein 5726934 8360754 Cpin_4581 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124224.1 5726545 D 485918 CDS YP_003124225.1 256423572 8360755 5726962..5727276 1 NC_013132.1 PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: hypothetical protein; methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein 5727276 8360755 Cpin_4582 Chitinophaga pinensis DSM 2588 methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein YP_003124225.1 5726962 D 485918 CDS YP_003124226.1 256423573 8360756 complement(5727360..5728145) 1 NC_013132.1 PFAM: protein of unknown function DUF980; KEGG: sde:Sde_1548 phenylalanyl-tRNA synthetase, alpha subunit; hypothetical protein 5728145 8360756 Cpin_4583 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124226.1 5727360 R 485918 CDS YP_003124227.1 256423574 8360757 5728328..5729947 1 NC_013132.1 PFAM: Dak kinase; Dak phosphatase; KEGG: mlo:mll5296 dihydroxyacetone kinase; glycerone kinase 5729947 8360757 Cpin_4584 Chitinophaga pinensis DSM 2588 glycerone kinase YP_003124227.1 5728328 D 485918 CDS YP_003124228.1 256423575 8360758 complement(5730155..5731030) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 5731030 8360758 Cpin_4585 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124228.1 5730155 R 485918 CDS YP_003124229.1 256423576 8360759 5731318..5732361 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: acp:A2cp1_1323 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase GroES domain-containing protein 5732361 8360759 Cpin_4586 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003124229.1 5731318 D 485918 CDS YP_003124230.1 256423577 8360760 complement(5732388..5733095) 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: ribose 5-phosphate isomerase; PFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 5733095 8360760 Cpin_4587 Chitinophaga pinensis DSM 2588 ribose 5-phosphate isomerase YP_003124230.1 5732388 R 485918 CDS YP_003124231.1 256423578 8360762 5733558..5734061 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_3450 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 5734061 8360762 Cpin_4589 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003124231.1 5733558 D 485918 CDS YP_003124232.1 256423579 8360763 5734058..5734528 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bba:Bd1451 MarR family transcriptional regulator; MarR family transcriptional regulator 5734528 8360763 Cpin_4590 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003124232.1 5734058 D 485918 CDS YP_003124233.1 256423580 8360764 5734661..5736688 1 NC_013132.1 PFAM: beta-lactamase; KEGG: aba:Acid345_0612 beta-lactamase; beta-lactamase 5736688 8360764 Cpin_4591 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003124233.1 5734661 D 485918 CDS YP_003124234.1 256423581 8360765 complement(5736716..5736946) 1 NC_013132.1 KEGG: sal:Sala_0018 hypothetical protein; hypothetical protein 5736946 8360765 Cpin_4592 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124234.1 5736716 R 485918 CDS YP_003124235.1 256423582 8360766 complement(5737025..5737549) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oca:OCAR_6973 acetyltransferase, GNAT family; N-acetyltransferase GCN5 5737549 8360766 Cpin_4593 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003124235.1 5737025 R 485918 CDS YP_003124236.1 256423583 8360767 complement(5737837..5738178) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A2547 transcriptional regulator, MarR family; HxlR family transcriptional regulator 5738178 8360767 Cpin_4594 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003124236.1 5737837 R 485918 CDS YP_003124237.1 256423584 8360768 5738282..5738662 1 NC_013132.1 KEGG: bbt:BBta_2759 hypothetical protein; hypothetical protein 5738662 8360768 Cpin_4595 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124237.1 5738282 D 485918 CDS YP_003124238.1 256423585 8360769 5738748..5739704 1 NC_013132.1 hypothetical protein 5739704 8360769 Cpin_4596 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124238.1 5738748 D 485918 CDS YP_003124239.1 256423586 8360770 complement(5739812..5741656) 1 NC_013132.1 PFAM: sulfatase; KEGG: pat:Patl_2695 sulfatase; sulfatase 5741656 8360770 Cpin_4597 Chitinophaga pinensis DSM 2588 sulfatase YP_003124239.1 5739812 R 485918 CDS YP_003124240.1 256423587 8360771 5741840..5742271 1 NC_013132.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abc:ACICU_03092 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 5742271 8360771 Cpin_4598 Chitinophaga pinensis DSM 2588 3-demethylubiquinone-9 3-methyltransferase YP_003124240.1 5741840 D 485918 CDS YP_003124241.1 256423588 8360772 complement(5742298..5742870) 1 NC_013132.1 hypothetical protein 5742870 8360772 Cpin_4599 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124241.1 5742298 R 485918 CDS YP_003124242.1 256423589 8360773 complement(5742939..5743277) 1 NC_013132.1 KEGG: eli:ELI_09660 DNA-binding protein; DNA-binding protein 5743277 8360773 Cpin_4600 Chitinophaga pinensis DSM 2588 DNA-binding protein YP_003124242.1 5742939 R 485918 CDS YP_003124243.1 256423590 8360774 5743553..5743762 1 NC_013132.1 hypothetical protein 5743762 8360774 Cpin_4601 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124243.1 5743553 D 485918 CDS YP_003124244.1 256423591 8360775 complement(5743767..5744093) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vsp:VS_II0528 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator 5744093 8360775 Cpin_4602 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124244.1 5743767 R 485918 CDS YP_003124245.1 256423592 8360776 complement(5744199..5744462) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 5744462 8360776 Cpin_4603 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124245.1 5744199 R 485918 CDS YP_003124246.1 256423593 8360777 complement(5744605..5745189) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 5745189 8360777 Cpin_4604 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003124246.1 5744605 R 485918 CDS YP_003124247.1 256423594 8360778 complement(5745339..5746106) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bra:BRADO0018 short-chain dehydrogenases/reductases (SDR) family protein; short-chain dehydrogenase/reductase SDR 5746106 8360778 Cpin_4605 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124247.1 5745339 R 485918 CDS YP_003124248.1 256423595 8360779 complement(5746276..5748303) 1 NC_013132.1 PFAM: glycoside hydrolase family 43; glycosyl hydrolase family 32 domain protein; KEGG: hypothetical protein; glycoside hydrolase 5748303 8360779 Cpin_4606 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003124248.1 5746276 R 485918 CDS YP_003124249.1 256423596 8360780 5748577..5749137 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor; ECF subfamily RNA polymerase sigma-24 subunit 5749137 8360780 Cpin_4607 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124249.1 5748577 D 485918 CDS YP_003124250.1 256423597 8360781 5749249..5750400 1 NC_013132.1 PFAM: FecR protein; KEGG: nwi:Nwi_3080 FecR protein; anti-FecI sigma factor FecR 5750400 8360781 Cpin_4608 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124250.1 5749249 D 485918 CDS YP_003124251.1 256423598 8360782 5750648..5753917 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 5753917 8360782 Cpin_4609 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124251.1 5750648 D 485918 CDS YP_003124252.1 256423599 8360783 5753928..5755412 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 5755412 8360783 Cpin_4610 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124252.1 5753928 D 485918 CDS YP_003124253.1 256423600 8360784 5755481..5756401 1 NC_013132.1 hypothetical protein 5756401 8360784 Cpin_4611 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124253.1 5755481 D 485918 CDS YP_003124254.1 256423601 8360785 5756485..5759097 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 5759097 8360785 Cpin_4612 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003124254.1 5756485 D 485918 CDS YP_003124255.1 256423602 8360786 complement(5759143..5759382) 1 NC_013132.1 hypothetical protein 5759382 8360786 Cpin_4613 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124255.1 5759143 R 485918 CDS YP_003124256.1 256423603 8360787 complement(5759701..5760078) 1 NC_013132.1 KEGG: mxa:MXAN_2189 hypothetical protein; hypothetical protein 5760078 8360787 Cpin_4614 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124256.1 5759701 R 485918 CDS YP_003124257.1 256423604 8360788 complement(5760100..5760843) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: cps:CPS_1680 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 5760843 8360788 Cpin_4615 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124257.1 5760100 R 485918 CDS YP_003124258.1 256423605 8360789 5760940..5761284 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bcb:BCB4264_A2547 transcriptional regulator, MarR family; HxlR family transcriptional regulator 5761284 8360789 Cpin_4616 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003124258.1 5760940 D 485918 CDS YP_003124259.1 256423606 8360790 5761831..5764908 1 NC_013132.1 PFAM: protein of unknown function DUF1680; KEGG: hypothetical protein; hypothetical protein 5764908 8360790 Cpin_4617 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124259.1 5761831 D 485918 CDS YP_003124260.1 256423607 8360791 complement(5764936..5765673) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll2997 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 5765673 8360791 Cpin_4618 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124260.1 5764936 R 485918 CDS YP_003124261.1 256423608 8360792 complement(5765740..5766621) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cps:CPS_4655 AraC family transcriptional regulator; AraC family transcriptional regulator 5766621 8360792 Cpin_4619 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124261.1 5765740 R 485918 CDS YP_003124262.1 256423609 8360793 complement(5766707..5767588) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family; AraC family transcriptional regulator 5767588 8360793 Cpin_4620 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124262.1 5766707 R 485918 CDS YP_003124263.1 256423610 8360794 complement(5767754..5768671) 1 NC_013132.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: rde:RD1_2498 pyridoxamine 5'-phosphate oxidase family protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 5768671 8360794 Cpin_4621 Chitinophaga pinensis DSM 2588 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_003124263.1 5767754 R 485918 CDS YP_003124264.1 256423611 8360795 complement(5768948..5769946) 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 5769946 8360795 Cpin_4622 Chitinophaga pinensis DSM 2588 biotin synthase YP_003124264.1 5768948 R 485918 CDS YP_003124265.1 256423612 8360796 5770042..5771511 1 NC_013132.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4302 GntR family transcriptional regulator; GntR family transcriptional regulator 5771511 8360796 Cpin_4623 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003124265.1 5770042 D 485918 CDS YP_003124266.1 256423613 8360797 5772006..5773922 1 NC_013132.1 KEGG: saz:Sama_0438 signal transduction histidine kinase-like protein; hypothetical protein 5773922 8360797 Cpin_4624 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124266.1 5772006 D 485918 CDS YP_003124267.1 256423614 8360798 complement(5774054..5775763) 1 NC_013132.1 PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pcr:Pcryo_0937 hypothetical protein; hypothetical protein 5775763 8360798 Cpin_4625 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124267.1 5774054 R 485918 CDS YP_003124268.1 256423615 8360799 complement(5775946..5777037) 1 NC_013132.1 KEGG: mxa:MXAN_4430 hypothetical protein; hypothetical protein 5777037 8360799 Cpin_4626 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124268.1 5775946 R 485918 CDS YP_003124269.1 256423616 8360800 5777489..5779315 1 NC_013132.1 KEGG: scl:sce1184 hypothetical protein; hypothetical protein 5779315 8360800 Cpin_4627 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124269.1 5777489 D 485918 CDS YP_003124270.1 256423617 8360801 complement(5779383..5780201) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: mpo:Mpop_3187 alpha/beta hydrolase; alpha/beta hydrolase 5780201 8360801 Cpin_4628 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003124270.1 5779383 R 485918 CDS YP_003124271.1 256423618 8360802 5780324..5780908 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: sde:Sde_3995 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 5780908 8360802 Cpin_4629 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003124271.1 5780324 D 485918 CDS YP_003124272.1 256423619 8360803 complement(5781121..5781501) 1 NC_013132.1 PFAM: protein of unknown function DUF1486; KEGG: bph:Bphy_5476 hypothetical protein; hypothetical protein 5781501 8360803 Cpin_4630 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124272.1 5781121 R 485918 CDS YP_003124273.1 256423620 8360804 complement(5781637..5781939) 1 NC_013132.1 PFAM: protein of unknown function DUF805; KEGG: pst:PSPTO_0278 hypothetical protein; hypothetical protein 5781939 8360804 Cpin_4631 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124273.1 5781637 R 485918 CDS YP_003124274.1 256423621 8360805 5782556..5783107 1 NC_013132.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_3196 bifunctional deaminase- reductase-like; bifunctional deaminase-reductase domain-containing protein 5783107 8360805 Cpin_4632 Chitinophaga pinensis DSM 2588 bifunctional deaminase-reductase domain-containing protein YP_003124274.1 5782556 D 485918 CDS YP_003124275.1 256423622 8360806 5783117..5783545 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3- methyltransferase; KEGG: aci:ACIAD0693 hypothetical protein; bleomycin resistance protein 5783545 8360806 Cpin_4633 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003124275.1 5783117 D 485918 CDS YP_003124276.1 256423623 8360807 5783696..5784085 1 NC_013132.1 hypothetical protein 5784085 8360807 Cpin_4634 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124276.1 5783696 D 485918 CDS YP_003124277.1 256423624 8360808 5784465..5785745 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: swd:Swoo_0364 major facilitator transporter; major facilitator superfamily protein 5785745 8360808 Cpin_4635 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003124277.1 5784465 D 485918 CDS YP_003124278.1 256423625 8360809 complement(5785877..5787658) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 5787658 8360809 Cpin_4636 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124278.1 5785877 R 485918 CDS YP_003124279.1 256423626 8360810 complement(5787682..5790867) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 5790867 8360810 Cpin_4637 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003124279.1 5787682 R 485918 CDS YP_003124280.1 256423627 8360811 5791507..5791644 1 NC_013132.1 hypothetical protein 5791644 8360811 Cpin_4638 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124280.1 5791507 D 485918 CDS YP_003124281.1 256423628 8360812 5792686..5793660 1 NC_013132.1 hypothetical protein 5793660 8360812 Cpin_4639 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124281.1 5792686 D 485918 CDS YP_003124282.1 256423629 8360813 5793762..5797730 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5797730 8360813 Cpin_4640 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124282.1 5793762 D 485918 CDS YP_003124283.1 256423630 8360814 5797824..5802209 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 5802209 8360814 Cpin_4641 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124283.1 5797824 D 485918 CDS YP_003124284.1 256423631 8360815 complement(5802852..5802944) 1 NC_013132.1 hypothetical protein 5802944 8360815 Cpin_4642 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124284.1 5802852 R 485918 CDS YP_003124285.1 256423632 8360818 5804361..5804720 1 NC_013132.1 hypothetical protein 5804720 8360818 Cpin_4645 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124285.1 5804361 D 485918 CDS YP_003124286.1 256423633 8360819 5805313..5805546 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 5805546 8360819 Cpin_4646 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003124286.1 5805313 D 485918 CDS YP_003124287.1 256423634 8360820 5805599..5805898 1 NC_013132.1 hypothetical protein 5805898 8360820 Cpin_4647 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124287.1 5805599 D 485918 CDS YP_003124288.1 256423635 8360821 complement(5805910..5806743) 1 NC_013132.1 PFAM: protein of unknown function DUF159; KEGG: bsu:BSU20490 hypothetical protein; hypothetical protein 5806743 8360821 Cpin_4648 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124288.1 5805910 R 485918 CDS YP_003124289.1 256423636 8360822 complement(5806753..5807097) 1 NC_013132.1 hypothetical protein 5807097 8360822 Cpin_4649 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124289.1 5806753 R 485918 CDS YP_003124290.1 256423637 8360823 complement(5807328..5807687) 1 NC_013132.1 hypothetical protein 5807687 8360823 Cpin_4650 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124290.1 5807328 R 485918 CDS YP_003124291.1 256423638 8360824 complement(5807834..5808427) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5808427 8360824 Cpin_4651 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124291.1 5807834 R 485918 CDS YP_003124292.1 256423639 8360825 complement(5808414..5808632) 1 NC_013132.1 hypothetical protein 5808632 8360825 Cpin_4652 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124292.1 5808414 R 485918 CDS YP_003124293.1 256423640 8360827 5809668..5810237 1 NC_013132.1 PFAM: CheB methylesterase; KEGG: reu:Reut_B4915 PAS; CheB methylesterase 5810237 8360827 Cpin_4654 Chitinophaga pinensis DSM 2588 CheB methylesterase YP_003124293.1 5809668 D 485918 CDS YP_003124294.1 256423641 8360828 5810353..5810775 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: eba:ebA6392 response regulator; response regulator receiver protein 5810775 8360828 Cpin_4655 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003124294.1 5810353 D 485918 CDS YP_003124295.1 256423642 8360829 5811140..5811580 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: bpd:BURPS668_A0089 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 5811580 8360829 Cpin_4656 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124295.1 5811140 D 485918 CDS YP_003124296.1 256423643 8360830 5811764..5811970 1 NC_013132.1 hypothetical protein 5811970 8360830 Cpin_4657 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124296.1 5811764 D 485918 CDS YP_003124297.1 256423644 8360831 5811979..5812281 1 NC_013132.1 KEGG: neu:NE1591 hypothetical protein; hypothetical protein 5812281 8360831 Cpin_4658 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124297.1 5811979 D 485918 CDS YP_003124298.1 256423645 8360832 5812434..5813726 1 NC_013132.1 PFAM: FecR protein; KEGG: nwi:Nwi_0657 FecR protein; anti-FecI sigma factor FecR 5813726 8360832 Cpin_4659 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124298.1 5812434 D 485918 CDS YP_003124299.1 256423646 8360833 5813872..5816556 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 5816556 8360833 Cpin_4660 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124299.1 5813872 D 485918 CDS YP_003124300.1 256423647 8360835 5817939..5819255 1 NC_013132.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; KEGG: afr:AFE_2205 Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 5819255 8360835 Cpin_4662 Chitinophaga pinensis DSM 2588 Na+/H+ antiporter NhaA YP_003124300.1 5817939 D 485918 CDS YP_003124301.1 256423648 8360836 complement(5819371..5819727) 1 NC_013132.1 KEGG: dsh:Dshi_0010 hypothetical protein; hypothetical protein 5819727 8360836 Cpin_4663 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124301.1 5819371 R 485918 CDS YP_003124302.1 256423649 8360837 5819901..5821223 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: bcj:BCAS0106 hypothetical protein; hypothetical protein 5821223 8360837 Cpin_4664 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124302.1 5819901 D 485918 CDS YP_003124303.1 256423650 8360839 5821581..5822381 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: dal:Dalk_1399 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5822381 8360839 Cpin_4665 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124303.1 5821581 D 485918 CDS YP_003124304.1 256423651 8360840 5822648..5823469 1 NC_013132.1 PFAM: protein of unknown function DUF62; KEGG: sus:Acid_0601 hypothetical protein; hypothetical protein 5823469 8360840 Cpin_4666 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124304.1 5822648 D 485918 CDS YP_003124305.1 256423652 8360841 5823660..5826890 1 NC_013132.1 KEGG: gsu:GSU1489 hypothetical protein; hypothetical protein 5826890 8360841 Cpin_4667 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124305.1 5823660 D 485918 CDS YP_003124306.1 256423653 8360842 complement(5827164..5827919) 1 NC_013132.1 KEGG: prw:PsycPRwf_1317 hypothetical protein; hypothetical protein 5827919 8360842 Cpin_4668 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124306.1 5827164 R 485918 CDS YP_003124307.1 256423654 8360843 complement(5828095..5828949) 1 NC_013132.1 PFAM: xylose isomerase; KEGG: sus:Acid_4406 xylose isomerase domain- containing protein; xylose isomerase 5828949 8360843 Cpin_4669 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003124307.1 5828095 R 485918 CDS YP_003124308.1 256423655 8360844 5829306..5830406 1 NC_013132.1 KEGG: aba:Acid345_3257 von Willebrand factor, type A; von Willebrand factor A 5830406 8360844 Cpin_4670 Chitinophaga pinensis DSM 2588 von Willebrand factor A YP_003124308.1 5829306 D 485918 CDS YP_003124309.1 256423656 8360845 5830454..5831953 1 NC_013132.1 KEGG: sus:Acid_2208 magnesium protoporphyrin chelatase; magnesium protoporphyrin chelatase 5831953 8360845 Cpin_4671 Chitinophaga pinensis DSM 2588 magnesium protoporphyrin chelatase YP_003124309.1 5830454 D 485918 CDS YP_003124310.1 256423657 8360846 5832106..5833416 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_7068 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 5833416 8360846 Cpin_4672 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003124310.1 5832106 D 485918 CDS YP_003124311.1 256423658 8360847 complement(5833485..5833973) 1 NC_013132.1 PFAM: ankyrin; SMART: ankyrin; KEGG: gbe:GbCGDNIH1_1865 ankyrin; ankyrin 5833973 8360847 Cpin_4673 Chitinophaga pinensis DSM 2588 ankyrin YP_003124311.1 5833485 R 485918 CDS YP_003124312.1 256423659 8360848 complement(5834391..5835302) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: gdi:GDI1164 hypothetical protein; metallophosphoesterase 5835302 8360848 Cpin_4674 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003124312.1 5834391 R 485918 CDS YP_003124313.1 256423660 8360849 complement(5835397..5836065) 1 NC_013132.1 PFAM: ABC transporter related; KEGG: ABC transporter related; K01996 branched- chain amino acid transport system ATP-binding protein; ABC transporter 5836065 8360849 Cpin_4675 Chitinophaga pinensis DSM 2588 ABC transporter YP_003124313.1 5835397 R 485918 CDS YP_003124314.1 256423661 8360850 complement(5836065..5836403) 1 NC_013132.1 hypothetical protein 5836403 8360850 Cpin_4676 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124314.1 5836065 R 485918 CDS YP_003124315.1 256423662 8360851 complement(5836472..5836978) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dar:Daro_0099 GCN5-related N- acetyltransferase:carbonic anhydrase; N-acetyltransferase GCN5 5836978 8360851 Cpin_4677 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003124315.1 5836472 R 485918 CDS YP_003124316.1 256423663 8360852 complement(5837216..5837641) 1 NC_013132.1 PFAM: protein of unknown function DUF1486; KEGG: bvi:Bcep1808_4732 hypothetical protein; hypothetical protein 5837641 8360852 Cpin_4678 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124316.1 5837216 R 485918 CDS YP_003124317.1 256423664 8360853 complement(5837711..5838592) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cju:C8J_0979 transcriptional regulatory protein; AraC family transcriptional regulator 5838592 8360853 Cpin_4679 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124317.1 5837711 R 485918 CDS YP_003124318.1 256423665 8360854 complement(5838617..5839675) 1 NC_013132.1 KEGG: spe:Spro_3058 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5839675 8360854 Cpin_4680 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003124318.1 5838617 R 485918 CDS YP_003124319.1 256423666 8360855 5839761..5840594 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sec:SC3938 transcriptional activator RhaS; AraC family transcriptional regulator 5840594 8360855 Cpin_4681 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124319.1 5839761 D 485918 CDS YP_003124320.1 256423667 8360856 5840709..5841419 1 NC_013132.1 hypothetical protein 5841419 8360856 Cpin_4682 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124320.1 5840709 D 485918 CDS YP_003124321.1 256423668 8360857 5841518..5842123 1 NC_013132.1 hypothetical protein 5842123 8360857 Cpin_4683 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124321.1 5841518 D 485918 CDS YP_003124322.1 256423669 8360858 complement(5842255..5843130) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dehydrogenase protein; short-chain dehydrogenase/reductase SDR 5843130 8360858 Cpin_4684 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124322.1 5842255 R 485918 CDS YP_003124323.1 256423670 8360859 complement(5843215..5843784) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: bba:Bd2071 TetR family transcriptional regulator; TetR family transcriptional regulator 5843784 8360859 Cpin_4685 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003124323.1 5843215 R 485918 CDS YP_003124324.1 256423671 8360860 5843881..5844624 1 NC_013132.1 PFAM: protein of unknown function DUF92 transmembrane; KEGG: Os01g0729100; hypothetical protein; hypothetical protein 5844624 8360860 Cpin_4686 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124324.1 5843881 D 485918 CDS YP_003124325.1 256423672 8360861 5844748..5845293 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcb:BCB4264_A1868 acetyltransferase, GNAT family; N-acetyltransferase GCN5 5845293 8360861 Cpin_4687 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003124325.1 5844748 D 485918 CDS YP_003124326.1 256423673 8360862 complement(5845429..5847996) 1 NC_013132.1 KEGG: afw:Anae109_3731 hypothetical protein; hypothetical protein 5847996 8360862 Cpin_4688 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124326.1 5845429 R 485918 CDS YP_003124327.1 256423674 8360863 complement(5848363..5849913) 1 NC_013132.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_0667 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter 5849913 8360863 Cpin_4689 Chitinophaga pinensis DSM 2588 EmrB/QacA subfamily drug resistance transporter YP_003124327.1 5848363 R 485918 CDS YP_003124328.1 256423675 8360864 complement(5850181..5850495) 1 NC_013132.1 hypothetical protein 5850495 8360864 Cpin_4690 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124328.1 5850181 R 485918 CDS YP_003124329.1 256423676 8360865 complement(5850492..5850953) 1 NC_013132.1 KEGG: sus:Acid_4522 DoxX family protein; hypothetical protein 5850953 8360865 Cpin_4691 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124329.1 5850492 R 485918 CDS YP_003124330.1 256423677 8360866 5850989..5851588 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: hch:HCH_05578 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP- dependent protein kinase; Crp/Fnr family transcriptional regulator 5851588 8360866 Cpin_4692 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003124330.1 5850989 D 485918 CDS YP_003124331.1 256423678 8360869 5852175..5853053 1 NC_013132.1 PFAM: purine or other phosphorylase family 1; KEGG: lpf:lpl1367 hypothetical protein; purine or other phosphorylase family 1 5853053 8360869 Cpin_4693 Chitinophaga pinensis DSM 2588 purine or other phosphorylase family 1 YP_003124331.1 5852175 D 485918 CDS YP_003124332.1 256423679 8360870 5853326..5854111 1 NC_013132.1 KEGG: sat:SYN_00169 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 5854111 8360870 Cpin_4694 Chitinophaga pinensis DSM 2588 diaminopimelate epimerase YP_003124332.1 5853326 D 485918 CDS YP_003124333.1 256423680 8360871 5854139..5855077 1 NC_013132.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: dvm:DvMF_1055 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein 5855077 8360871 Cpin_4695 Chitinophaga pinensis DSM 2588 Mg2 transporter protein CorA family protein YP_003124333.1 5854139 D 485918 CDS YP_003124334.1 256423681 8360872 5855100..5855549 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: bat:BAS2718 MutT/NUDIX family protein; NUDIX hydrolase 5855549 8360872 Cpin_4696 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003124334.1 5855100 D 485918 CDS YP_003124335.1 256423682 8360873 complement(5855554..5856354) 1 NC_013132.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: smt:Smal_2921 hypothetical protein; hypothetical protein 5856354 8360873 Cpin_4697 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124335.1 5855554 R 485918 CDS YP_003124336.1 256423683 8360874 complement(5856351..5856635) 1 NC_013132.1 hypothetical protein 5856635 8360874 Cpin_4698 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124336.1 5856351 R 485918 CDS YP_003124337.1 256423684 8360875 5856711..5857637 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_2573 glycosyl transferase family 2; family 2 glycosyl transferase 5857637 8360875 Cpin_4699 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003124337.1 5856711 D 485918 CDS YP_003124338.1 256423685 8360876 complement(5857760..5858068) 1 NC_013132.1 hypothetical protein 5858068 8360876 Cpin_4700 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124338.1 5857760 R 485918 CDS YP_003124339.1 256423686 8360877 complement(5858146..5859039) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 5859039 8360877 Cpin_4701 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124339.1 5858146 R 485918 CDS YP_003124340.1 256423687 8360878 complement(5859128..5859946) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5859946 8360878 Cpin_4702 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124340.1 5859128 R 485918 CDS YP_003124341.1 256423688 8360879 complement(5860067..5861071) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: nha:Nham_3032 glycosyl transferase family protein; family 2 glycosyl transferase 5861071 8360879 Cpin_4703 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003124341.1 5860067 R 485918 CDS YP_003124342.1 256423689 8360880 5861191..5862687 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 cytosol aminopeptidase; polysaccharide biosynthesis protein 5862687 8360880 Cpin_4704 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein YP_003124342.1 5861191 D 485918 CDS YP_003124343.1 256423690 8360881 complement(5862775..5863710) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: rms:RMA_0635 glycosyl transferase; family 2 glycosyl transferase 5863710 8360881 Cpin_4705 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003124343.1 5862775 R 485918 CDS YP_003124344.1 256423691 8360882 complement(5863712..5864827) 1 NC_013132.1 KEGG: mms:mma_2283 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 5864827 8360882 Cpin_4706 Chitinophaga pinensis DSM 2588 UDP-N-acetylglucosamine 2-epimerase YP_003124344.1 5863712 R 485918 CDS YP_003124345.1 256423692 8360883 complement(5864838..5865974) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: asa:ASA_0094 glycosyl transferase family protein; group 1 glycosyl transferase 5865974 8360883 Cpin_4707 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003124345.1 5864838 R 485918 CDS YP_003124346.1 256423693 8360884 complement(5866031..5866675) 1 NC_013132.1 PFAM: NLP/P60 protein; KEGG: shl:Shal_0052 NLP/P60 protein; NLP/P60 protein 5866675 8360884 Cpin_4708 Chitinophaga pinensis DSM 2588 NLP/P60 protein YP_003124346.1 5866031 R 485918 CDS YP_003124347.1 256423694 8360885 5866910..5870554 1 NC_013132.1 KEGG: glo:Glov_2723 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 5870554 8360885 Cpin_4709 Chitinophaga pinensis DSM 2588 DNA polymerase III subunit alpha YP_003124347.1 5866910 D 485918 CDS YP_003124348.1 256423695 8360886 5870725..5871042 1 NC_013132.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain protein; KEGG: thioredoxin; K03671 thioredoxin 1; thioredoxin 5871042 8360886 Cpin_4710 Chitinophaga pinensis DSM 2588 thioredoxin YP_003124348.1 5870725 D 485918 CDS YP_003124349.1 256423696 8360887 complement(5871235..5873907) 1 NC_013132.1 KEGG: sbm:Shew185_0166 outer membrane adhesin like protein; hypothetical protein 5873907 8360887 Cpin_4711 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124349.1 5871235 R 485918 CDS YP_003124350.1 256423697 8360888 5874580..5876718 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5876718 8360888 Cpin_4712 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124350.1 5874580 D 485918 CDS YP_003124351.1 256423698 8360889 5876724..5877905 1 NC_013132.1 PFAM: Radical SAM domain protein; KEGG: ank:AnaeK_0400 radical SAM domain protein; radical SAM protein 5877905 8360889 Cpin_4713 Chitinophaga pinensis DSM 2588 radical SAM protein YP_003124351.1 5876724 D 485918 CDS YP_003124352.1 256423699 8360890 5877919..5878455 1 NC_013132.1 PFAM: protein of unknown function DUF192; KEGG: nha:Nham_2141 hypothetical protein; hypothetical protein 5878455 8360890 Cpin_4714 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124352.1 5877919 D 485918 CDS YP_003124353.1 256423700 8360891 5879019..5880419 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: ecw:EcE24377A_4549 transcriptional regulatory protein ZraR; Fis family transcriptional regulator 5880419 8360891 Cpin_4715 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003124353.1 5879019 D 485918 CDS YP_003124354.1 256423701 8360892 complement(5880480..5882759) 1 NC_013132.1 TIGRFAM: membrane-bound dehydrogenase domain protein; KEGG: rso:RS02321 hypothetical protein; membrane-bound dehydrogenase domain-containing protein 5882759 8360892 Cpin_4716 Chitinophaga pinensis DSM 2588 membrane-bound dehydrogenase domain-containing protein YP_003124354.1 5880480 R 485918 CDS YP_003124355.1 256423702 8360893 5882952..5884214 1 NC_013132.1 PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: xca:xccb100_3588 broadly selective sodium/nucleoside cotransporter; Na+ dependent nucleoside transporter domain-containing protein 5884214 8360893 Cpin_4717 Chitinophaga pinensis DSM 2588 Na+ dependent nucleoside transporter domain-containing protein YP_003124355.1 5882952 D 485918 CDS YP_003124356.1 256423703 8360894 complement(5884484..5884882) 1 NC_013132.1 KEGG: cak:Caul_3403 hypothetical protein; hypothetical protein 5884882 8360894 Cpin_4718 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124356.1 5884484 R 485918 CDS YP_003124357.1 256423704 8360895 complement(5884918..5888448) 1 NC_013132.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: gbm:Gbem_0962 chromosome segregation protein SMC; chromosome segregation protein SMC 5888448 8360895 Cpin_4719 Chitinophaga pinensis DSM 2588 chromosome segregation protein SMC YP_003124357.1 5884918 R 485918 CDS YP_003124358.1 256423705 8360896 5888849..5891089 1 NC_013132.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: bur:Bcep18194_A4321 protein of unknown function DUF893, YccS/YhfK; hypothetical protein 5891089 8360896 Cpin_4720 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124358.1 5888849 D 485918 CDS YP_003124359.1 256423706 8360897 complement(5891256..5892851) 1 NC_013132.1 KEGG: ban:BA4058 hypothetical protein; hypothetical protein 5892851 8360897 Cpin_4721 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124359.1 5891256 R 485918 CDS YP_003124360.1 256423707 8360898 complement(5893119..5894390) 1 NC_013132.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 5894390 glgC 8360898 glgC Chitinophaga pinensis DSM 2588 glucose-1-phosphate adenylyltransferase YP_003124360.1 5893119 R 485918 CDS YP_003124361.1 256423708 8360899 complement(5894426..5895847) 1 NC_013132.1 KEGG: bha:BH1085 starch ( glycogen) synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: starch synthase catalytic domain protein; glycosyl transferase group 1; glycogen/starch synthase 5895847 8360899 Cpin_4723 Chitinophaga pinensis DSM 2588 glycogen/starch synthase YP_003124361.1 5894426 R 485918 CDS YP_003124362.1 256423709 8360900 5896156..5897067 1 NC_013132.1 PFAM: protein of unknown function DUF72; KEGG: aha:AHA_1520 hypothetical protein; hypothetical protein 5897067 8360900 Cpin_4724 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124362.1 5896156 D 485918 CDS YP_003124363.1 256423710 8360901 5897339..5900269 1 NC_013132.1 PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_1924 FAD linked oxidase-like; D-lactate dehydrogenase 5900269 8360901 Cpin_4725 Chitinophaga pinensis DSM 2588 D-lactate dehydrogenase YP_003124363.1 5897339 D 485918 CDS YP_003124364.1 256423711 8360902 complement(5900349..5901233) 1 NC_013132.1 PFAM: Protein of unknown function DUF706; KEGG: sus:Acid_4072 inositol oxygenase; inositol oxygenase 5901233 8360902 Cpin_4726 Chitinophaga pinensis DSM 2588 inositol oxygenase YP_003124364.1 5900349 R 485918 CDS YP_003124365.1 256423712 8360904 complement(5901681..5903330) 1 NC_013132.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: vfm:VFMJ11_A0389 sodium/glucose cotransporter; SSS sodium solute transporter superfamily protein 5903330 8360904 Cpin_4728 Chitinophaga pinensis DSM 2588 SSS sodium solute transporter superfamily protein YP_003124365.1 5901681 R 485918 CDS YP_003124366.1 256423713 8360905 5903468..5904508 1 NC_013132.1 KEGG: ppr:PBPRB0521 hypothetical protein; hypothetical protein 5904508 8360905 Cpin_4729 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124366.1 5903468 D 485918 CDS YP_003124367.1 256423714 8360906 complement(5904893..5905858) 1 NC_013132.1 PFAM: terpene synthase metal-binding domain protein; KEGG: scl:sce6369 pentalenene synthase; terpene synthase metal-binding domain-containing protein 5905858 8360906 Cpin_4730 Chitinophaga pinensis DSM 2588 terpene synthase metal-binding domain-containing protein YP_003124367.1 5904893 R 485918 CDS YP_003124368.1 256423715 8360907 complement(5905896..5906411) 1 NC_013132.1 KEGG: eca:ECA2789 isopentenyl-diphosphate delta-isomerase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase 5906411 8360907 Cpin_4731 Chitinophaga pinensis DSM 2588 isopentenyl-diphosphate delta-isomerase YP_003124368.1 5905896 R 485918 CDS YP_003124369.1 256423716 8360908 5906721..5907200 1 NC_013132.1 KEGG: gafA; GAF domain-containing protein; GAF domain-containing protein GafA 5907200 8360908 Cpin_4732 Chitinophaga pinensis DSM 2588 GAF domain-containing protein GafA YP_003124369.1 5906721 D 485918 CDS YP_003124370.1 256423717 8360909 5907230..5907997 1 NC_013132.1 KEGG: sun:SUN_1558 capsular polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein 5907997 8360909 Cpin_4733 Chitinophaga pinensis DSM 2588 capsular polysaccharide biosynthesis protein YP_003124370.1 5907230 D 485918 CDS YP_003124371.1 256423718 8360910 5908008..5909294 1 NC_013132.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: wsu:WS0054 UDP-glucose 6- dehydrogenase; nucleotide sugar dehydrogenase 5909294 8360910 Cpin_4734 Chitinophaga pinensis DSM 2588 nucleotide sugar dehydrogenase YP_003124371.1 5908008 D 485918 CDS YP_003124372.1 256423719 8360911 5910168..5910857 1 NC_013132.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: sfu:Sfum_1664 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 5910857 8360911 Cpin_4735 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003124372.1 5910168 D 485918 CDS YP_003124373.1 256423720 8360912 5910874..5910975 1 NC_013132.1 hypothetical protein 5910975 8360912 Cpin_4736 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124373.1 5910874 D 485918 CDS YP_003124374.1 256423721 8360913 complement(5911077..5912624) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: gme:Gmet_2223 NifA subfamily transcriptional regulator; Fis family transcriptional regulator 5912624 8360913 Cpin_4737 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003124374.1 5911077 R 485918 CDS YP_003124375.1 256423722 8360914 5912818..5912961 1 NC_013132.1 hypothetical protein 5912961 8360914 Cpin_4738 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124375.1 5912818 D 485918 CDS YP_003124376.1 256423723 8360915 5913094..5914098 1 NC_013132.1 KEGG: reu:Reut_A3308 hypothetical protein; hypothetical protein 5914098 8360915 Cpin_4739 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124376.1 5913094 D 485918 CDS YP_003124377.1 256423724 8360916 complement(5914599..5915366) 1 NC_013132.1 KEGG: aba:Acid345_2908 secreted glycosyl hydrolase; secreted glycosyl hydrolase 5915366 8360916 Cpin_4740 Chitinophaga pinensis DSM 2588 secreted glycosyl hydrolase YP_003124377.1 5914599 R 485918 CDS YP_003124378.1 256423725 8360917 complement(5915422..5915934) 1 NC_013132.1 hypothetical protein 5915934 8360917 Cpin_4741 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124378.1 5915422 R 485918 CDS YP_003124379.1 256423726 8360918 5916115..5916435 1 NC_013132.1 PFAM: SWIB/MDM2 domain protein; SMART: SWIB/MDM2 domain protein; KEGG: bpt:Bpet0685 hypothetical protein; SWIB/MDM2 domain-containing protein 5916435 8360918 Cpin_4742 Chitinophaga pinensis DSM 2588 SWIB/MDM2 domain-containing protein YP_003124379.1 5916115 D 485918 CDS YP_003124380.1 256423727 8360919 complement(5916505..5918127) 1 NC_013132.1 hypothetical protein 5918127 8360919 Cpin_4743 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124380.1 5916505 R 485918 CDS YP_003124381.1 256423728 8360921 complement(5919068..5920264) 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: gdj:Gdia_1872 acyltransferase 3; acyltransferase 3 5920264 8360921 Cpin_4745 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003124381.1 5919068 R 485918 CDS YP_003124382.1 256423729 8360922 complement(5920307..5920852) 1 NC_013132.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ftn:FTN_1428 transferase; transferase 5920852 8360922 Cpin_4746 Chitinophaga pinensis DSM 2588 transferase YP_003124382.1 5920307 R 485918 CDS YP_003124383.1 256423730 8360923 complement(5920853..5921815) 1 NC_013132.1 PFAM: glycosyl transferase family 4; KEGG: rcm:A1E_05300 undecaprenyl-phosphate alpha-N- acetylglucosaminyltransferase; glycosyl transferase family protein 5921815 8360923 Cpin_4747 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003124383.1 5920853 R 485918 CDS YP_003124384.1 256423731 8360924 complement(5921812..5922735) 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: esa:ESA_01176 hypothetical protein; NAD-dependent epimerase/dehydratase 5922735 8360924 Cpin_4748 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003124384.1 5921812 R 485918 CDS YP_003124385.1 256423732 8360925 complement(5922732..5923955) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: vfi:VF_0194 glycosyl transferases group 1- like protein; group 1 glycosyl transferase 5923955 8360925 Cpin_4749 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003124385.1 5922732 R 485918 CDS YP_003124386.1 256423733 8360926 complement(5923957..5925108) 1 NC_013132.1 KEGG: gbm:Gbem_1623 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 5925108 8360926 Cpin_4750 Chitinophaga pinensis DSM 2588 UDP-N-acetylglucosamine 2-epimerase YP_003124386.1 5923957 R 485918 CDS YP_003124387.1 256423734 8360927 complement(5925132..5926250) 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bcr:BCAH187_A5443 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5926250 8360927 Cpin_4751 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003124387.1 5925132 R 485918 CDS YP_003124388.1 256423735 8360928 complement(5926247..5926705) 1 NC_013132.1 hypothetical protein 5926705 8360928 Cpin_4752 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124388.1 5926247 R 485918 CDS YP_003124389.1 256423736 8360929 complement(5926674..5927711) 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 5927711 8360929 Cpin_4753 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein CapD YP_003124389.1 5926674 R 485918 CDS YP_003124390.1 256423737 8360930 complement(5927718..5928854) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: vvy:VV0348 hypothetical protein; group 1 glycosyl transferase 5928854 8360930 Cpin_4754 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003124390.1 5927718 R 485918 CDS YP_003124391.1 256423738 8360931 complement(5928896..5930386) 1 NC_013132.1 KEGG: mlo:mll7617 hypothetical protein; hypothetical protein 5930386 8360931 Cpin_4755 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124391.1 5928896 R 485918 CDS YP_003124392.1 256423739 8360932 complement(5930446..5931603) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: ajs:Ajs_3023 glycosyl transferase, group 1; group 1 glycosyl transferase 5931603 8360932 Cpin_4756 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003124392.1 5930446 R 485918 CDS YP_003124393.1 256423740 8360933 complement(5931630..5932697) 1 NC_013132.1 KEGG: glo:Glov_1505 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 5932697 8360933 Cpin_4757 Chitinophaga pinensis DSM 2588 UDP-N-acetylglucosamine 2-epimerase YP_003124393.1 5931630 R 485918 CDS YP_003124394.1 256423741 8360934 complement(5932697..5934007) 1 NC_013132.1 KEGG: rle:RL0817 transmembrane protein; hypothetical protein 5934007 8360934 Cpin_4758 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124394.1 5932697 R 485918 CDS YP_003124395.1 256423742 8360935 complement(5934015..5935310) 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein; KEGG: sun:SUN_0096 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 5935310 8360935 Cpin_4759 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein YP_003124395.1 5934015 R 485918 CDS YP_003124396.1 256423743 8360936 complement(5935335..5936360) 1 NC_013132.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mgm:Mmc1_2424 oxidoreductase domain protein; oxidoreductase domain-containing protein 5936360 8360936 Cpin_4760 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003124396.1 5935335 R 485918 CDS YP_003124397.1 256423744 8360937 complement(5936362..5936934) 1 NC_013132.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cco:CCC13826_0541 hexapaptide repeat- containing transferase; transferase 5936934 8360937 Cpin_4761 Chitinophaga pinensis DSM 2588 transferase YP_003124397.1 5936362 R 485918 CDS YP_003124398.1 256423745 8360938 complement(5936943..5938094) 1 NC_013132.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class I and II; aromatic amino acid beta- eliminating lyase/threonine aldolase; KEGG: pca:Pcar_1257 pyridoxal phosphate-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase 5938094 8360938 Cpin_4762 Chitinophaga pinensis DSM 2588 DegT/DnrJ/EryC1/StrS aminotransferase YP_003124398.1 5936943 R 485918 CDS YP_003124399.1 256423746 8360939 complement(5938132..5939460) 1 NC_013132.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: nis:NIS_0283 UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 5939460 8360939 Cpin_4763 Chitinophaga pinensis DSM 2588 nucleotide sugar dehydrogenase YP_003124399.1 5938132 R 485918 CDS YP_003124400.1 256423747 8360940 complement(5939642..5942038) 1 NC_013132.1 KEGG: sun:SUN_1559 capsular polysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 5942038 8360940 Cpin_4764 Chitinophaga pinensis DSM 2588 capsular exopolysaccharide family protein YP_003124400.1 5939642 R 485918 CDS YP_003124401.1 256423748 8360941 complement(5942057..5942902) 1 NC_013132.1 KEGG: sun:SUN_1740 polysaccharide export system outer membrane protein; polysaccharide export periplasmic protein 5942902 8360941 Cpin_4765 Chitinophaga pinensis DSM 2588 polysaccharide export periplasmic protein YP_003124401.1 5942057 R 485918 CDS YP_003124402.1 256423749 8360942 complement(5942981..5944912) 1 NC_013132.1 PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein; polysaccharide biosynthesis protein CapD 5944912 8360942 Cpin_4766 Chitinophaga pinensis DSM 2588 polysaccharide biosynthesis protein CapD YP_003124402.1 5942981 R 485918 CDS YP_003124403.1 256423750 8360943 5945338..5945451 1 NC_013132.1 hypothetical protein 5945451 8360943 Cpin_4767 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124403.1 5945338 D 485918 CDS YP_003124404.1 256423751 8360944 complement(5945725..5946000) 1 NC_013132.1 hypothetical protein 5946000 8360944 Cpin_4768 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124404.1 5945725 R 485918 CDS YP_003124405.1 256423752 8360945 complement(5946214..5946777) 1 NC_013132.1 hypothetical protein 5946777 8360945 Cpin_4769 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124405.1 5946214 R 485918 CDS YP_003124406.1 256423753 8360946 complement(5946839..5947405) 1 NC_013132.1 hypothetical protein 5947405 8360946 Cpin_4770 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124406.1 5946839 R 485918 CDS YP_003124407.1 256423754 8360947 complement(5947616..5947936) 1 NC_013132.1 PFAM: LytTr DNA-binding region; KEGG: amc:MADE_01349 regulatory protein; response regulator receiver protein 5947936 8360947 Cpin_4771 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003124407.1 5947616 R 485918 CDS YP_003124408.1 256423755 8360948 complement(5948492..5948779) 1 NC_013132.1 hypothetical protein 5948779 8360948 Cpin_4772 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124408.1 5948492 R 485918 CDS YP_003124409.1 256423756 8360949 5948892..5949164 1 NC_013132.1 hypothetical protein 5949164 8360949 Cpin_4773 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124409.1 5948892 D 485918 CDS YP_003124410.1 256423757 8360950 complement(5949165..5949596) 1 NC_013132.1 hypothetical protein 5949596 8360950 Cpin_4774 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124410.1 5949165 R 485918 CDS YP_003124411.1 256423758 8360951 complement(5949909..5950121) 1 NC_013132.1 PFAM: Domain of unknown function DUF1813 HSP20- like; KEGG: cti:RALTA_A2680 hypothetical protein; hypothetical protein 5950121 8360951 Cpin_4775 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124411.1 5949909 R 485918 CDS YP_003124412.1 256423759 8360952 5950278..5950613 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pfl:PFL_0167 DNA-binding protein; XRE family transcriptional regulator 5950613 8360952 Cpin_4776 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003124412.1 5950278 D 485918 CDS YP_003124413.1 256423760 8360953 complement(5950787..5951197) 1 NC_013132.1 KEGG: bcj:BCAS0686 hypothetical protein; hypothetical protein 5951197 8360953 Cpin_4777 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124413.1 5950787 R 485918 CDS YP_003124414.1 256423761 8360955 complement(5951963..5952343) 1 NC_013132.1 hypothetical protein 5952343 8360955 Cpin_4779 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124414.1 5951963 R 485918 CDS YP_003124415.1 256423762 8360956 complement(5952506..5952640) 1 NC_013132.1 hypothetical protein 5952640 8360956 Cpin_4780 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124415.1 5952506 R 485918 CDS YP_003124416.1 256423763 8360957 5952781..5953122 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pfl:PFL_0167 DNA-binding protein; XRE family transcriptional regulator 5953122 8360957 Cpin_4781 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003124416.1 5952781 D 485918 CDS YP_003124417.1 256423764 8360958 complement(5953184..5953633) 1 NC_013132.1 hypothetical protein 5953633 8360958 Cpin_4782 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124417.1 5953184 R 485918 CDS YP_003124418.1 256423765 8360959 complement(5953635..5954645) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5954645 8360959 Cpin_4783 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124418.1 5953635 R 485918 CDS YP_003124419.1 256423766 8360960 complement(5955826..5956689) 1 NC_013132.1 PFAM: integrase family protein; KEGG: neu:NE1458 phage integrase domain/SAM domain- containing protein; integrase family protein 5956689 8360960 Cpin_4784 Chitinophaga pinensis DSM 2588 integrase family protein YP_003124419.1 5955826 R 485918 CDS YP_003124420.1 256423767 8360961 complement(5956686..5957540) 1 NC_013132.1 PFAM: integrase family protein; KEGG: rso:RS05531 site-specific tyrosine recombinase XerC; integrase family protein 5957540 8360961 Cpin_4785 Chitinophaga pinensis DSM 2588 integrase family protein YP_003124420.1 5956686 R 485918 CDS YP_003124421.1 256423768 8360962 complement(5957635..5960334) 1 NC_013132.1 PFAM: zinc finger CHC2-family protein; SMART: zinc finger CHC2-family protein; KEGG: eca:ECA3416 DnaG primase-like protein; zinc finger CHC2-family protein 5960334 8360962 Cpin_4786 Chitinophaga pinensis DSM 2588 zinc finger CHC2-family protein YP_003124421.1 5957635 R 485918 CDS YP_003124422.1 256423769 8360963 complement(5960312..5960530) 1 NC_013132.1 PFAM: Domain of unknown function DUF1813 HSP20- like; KEGG: cti:RALTA_A2680 hypothetical protein; hypothetical protein 5960530 8360963 Cpin_4787 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124422.1 5960312 R 485918 CDS YP_003124423.1 256423770 8360964 5960672..5961016 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pfl:PFL_0167 DNA-binding protein; XRE family transcriptional regulator 5961016 8360964 Cpin_4788 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003124423.1 5960672 D 485918 CDS YP_003124424.1 256423771 8360965 complement(5961386..5969980) 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 5969980 8360965 Cpin_4789 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124424.1 5961386 R 485918 CDS YP_003124425.1 256423772 8360966 complement(5969977..5971638) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 5971638 8360966 Cpin_4790 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124425.1 5969977 R 485918 CDS YP_003124426.1 256423773 8360967 complement(5971658..5978416) 1 NC_013132.1 PFAM: PA14 domain protein; SMART: PA14 domain protein; KEGG: cja:CJA_2385 MSHA biogenesis protein MshQ; PA14 domain-containing protein 5978416 8360967 Cpin_4791 Chitinophaga pinensis DSM 2588 PA14 domain-containing protein YP_003124426.1 5971658 R 485918 CDS YP_003124427.1 256423774 8360968 5979384..5981711 1 NC_013132.1 KEGG: similar to CAP-Gly domain-containing linker protein 1 (Restin) (Cytoplasmic linker protein 170 alpha-2) (CLIP-170) (Reed-Sternberg intermediate filament-associated protein) (Cytoplasmic linker protein 1); hypothetical protein 5981711 8360968 Cpin_4792 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124427.1 5979384 D 485918 CDS YP_003124428.1 256423775 8360969 5981714..5982811 1 NC_013132.1 hypothetical protein 5982811 8360969 Cpin_4793 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124428.1 5981714 D 485918 CDS YP_003124429.1 256423776 8360970 5982858..5983601 1 NC_013132.1 hypothetical protein 5983601 8360970 Cpin_4794 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124429.1 5982858 D 485918 CDS YP_003124430.1 256423777 8360971 complement(5983802..5984035) 1 NC_013132.1 hypothetical protein 5984035 8360971 Cpin_4795 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124430.1 5983802 R 485918 CDS YP_003124431.1 256423778 8360972 complement(5984056..5984712) 1 NC_013132.1 hypothetical protein 5984712 8360972 Cpin_4796 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124431.1 5984056 R 485918 CDS YP_003124432.1 256423779 8360973 complement(5984803..5985474) 1 NC_013132.1 PFAM: ThiJ/PfpI domain protein; KEGG: rle:RL0311 DJ-1/PfPI family protein; ThiJ/PfpI domain-containing protein 5985474 8360973 Cpin_4797 Chitinophaga pinensis DSM 2588 ThiJ/PfpI domain-containing protein YP_003124432.1 5984803 R 485918 CDS YP_003124433.1 256423780 8360974 complement(5985508..5985798) 1 NC_013132.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: xca:xccb100_0045 hypothetical protein; antibiotic biosynthesis monooxygenase 5985798 8360974 Cpin_4798 Chitinophaga pinensis DSM 2588 antibiotic biosynthesis monooxygenase YP_003124433.1 5985508 R 485918 CDS YP_003124434.1 256423781 8360975 complement(5985889..5986470) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 5986470 8360975 Cpin_4799 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003124434.1 5985889 R 485918 CDS YP_003124435.1 256423782 8360976 complement(5986597..5987982) 1 NC_013132.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B1231 RND efflux system outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein 5987982 8360976 Cpin_4800 Chitinophaga pinensis DSM 2588 NodT family RND efflux system outer membrane lipoprotein YP_003124435.1 5986597 R 485918 CDS YP_003124436.1 256423783 8360977 complement(5987984..5991226) 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: dvm:DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 5991226 8360977 Cpin_4801 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003124436.1 5987984 R 485918 CDS YP_003124437.1 256423784 8360978 complement(5991253..5992449) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: afw:Anae109_0569 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 5992449 8360978 Cpin_4802 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003124437.1 5991253 R 485918 CDS YP_003124438.1 256423785 8360979 complement(5992582..5992968) 1 NC_013132.1 PFAM: manganese and iron superoxide dismutase; KEGG: xca:xccb100_0423 exported superoxide dismutase; manganese and iron superoxide dismutase 5992968 8360979 Cpin_4803 Chitinophaga pinensis DSM 2588 manganese and iron superoxide dismutase YP_003124438.1 5992582 R 485918 CDS YP_003124439.1 256423786 8360980 5993099..5993731 1 NC_013132.1 KEGG: bte:BTH_II1289 hypothetical protein; transcriptional regulator 5993731 8360980 Cpin_4804 Chitinophaga pinensis DSM 2588 transcriptional regulator YP_003124439.1 5993099 D 485918 CDS YP_003124440.1 256423787 8360981 complement(5993825..5994325) 1 NC_013132.1 hypothetical protein 5994325 8360981 Cpin_4805 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124440.1 5993825 R 485918 CDS YP_003124441.1 256423788 8360982 5994420..5994878 1 NC_013132.1 hypothetical protein 5994878 8360982 Cpin_4806 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124441.1 5994420 D 485918 CDS YP_003124442.1 256423789 8360983 5995021..5996421 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpe:BP2133 transmembrane efflux protein; major facilitator superfamily protein 5996421 8360983 Cpin_4807 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003124442.1 5995021 D 485918 CDS YP_003124443.1 256423790 8360984 5996402..5997418 1 NC_013132.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: efe:EFER_3470 transcriptional regulator; GntR family transcriptional regulator 5997418 8360984 Cpin_4808 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003124443.1 5996402 D 485918 CDS YP_003124444.1 256423791 8360985 complement(5997535..5997969) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_0772 acetyltransferase; N-acetyltransferase GCN5 5997969 8360985 Cpin_4809 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003124444.1 5997535 R 485918 CDS YP_003124445.1 256423792 8360986 5998062..5999486 1 NC_013132.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: mxa:MXAN_7072 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein; GntR family transcriptional regulator 5999486 8360986 Cpin_4810 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003124445.1 5998062 D 485918 CDS YP_003124446.1 256423793 8360987 complement(5999523..6002438) 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: cak:Caul_2133 glycoside hydrolase family protein; coagulation factor 5/8 type domain-containing protein 6002438 8360987 Cpin_4811 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003124446.1 5999523 R 485918 CDS YP_003124447.1 256423794 8360988 complement(6002468..6005524) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 6005524 8360988 Cpin_4812 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003124447.1 6002468 R 485918 CDS YP_003124448.1 256423795 8360989 complement(6005559..6007265) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6007265 8360989 Cpin_4813 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124448.1 6005559 R 485918 CDS YP_003124449.1 256423796 8360990 complement(6007288..6010365) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 6010365 8360990 Cpin_4814 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003124449.1 6007288 R 485918 CDS YP_003124450.1 256423797 8360991 complement(6010390..6011322) 1 NC_013132.1 hypothetical protein 6011322 8360991 Cpin_4815 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124450.1 6010390 R 485918 CDS YP_003124451.1 256423798 8360992 complement(6011374..6011802) 1 NC_013132.1 hypothetical protein 6011802 8360992 Cpin_4816 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124451.1 6011374 R 485918 CDS YP_003124452.1 256423799 8360993 complement(6011813..6013507) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6013507 8360993 Cpin_4817 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124452.1 6011813 R 485918 CDS YP_003124453.1 256423800 8360994 complement(6013660..6015120) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6015120 8360994 Cpin_4818 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124453.1 6013660 R 485918 CDS YP_003124454.1 256423801 8360995 complement(6015230..6018331) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 6018331 8360995 Cpin_4819 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003124454.1 6015230 R 485918 CDS YP_003124455.1 256423802 8360996 complement(6018515..6020788) 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2651 alpha-1,2-mannosidase family protein; alpha-1,2-mannosidase 6020788 8360996 Cpin_4820 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003124455.1 6018515 R 485918 CDS YP_003124456.1 256423803 8360997 complement(6020832..6022202) 1 NC_013132.1 PFAM: lipolytic protein G-D-S-L family; KEGG: pat:Patl_0828 lipolytic enzyme, G-D-S-L; G-D-S-L family lipolytic protein 6022202 8360997 Cpin_4821 Chitinophaga pinensis DSM 2588 G-D-S-L family lipolytic protein YP_003124456.1 6020832 R 485918 CDS YP_003124457.1 256423804 8360998 complement(6022213..6024705) 1 NC_013132.1 PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; KEGG: rec:RHECIAT_PC0000709 alpha- mannosidase protein; glycoside hydrolase 6024705 8360998 Cpin_4822 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003124457.1 6022213 R 485918 CDS YP_003124458.1 256423805 8360999 complement(6024714..6026201) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6026201 8360999 Cpin_4823 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124458.1 6024714 R 485918 CDS YP_003124459.1 256423806 8361000 complement(6026218..6029559) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6029559 8361000 Cpin_4824 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124459.1 6026218 R 485918 CDS YP_003124460.1 256423807 8361001 complement(6029589..6030575) 1 NC_013132.1 PFAM: FecR protein; KEGG: pap:PSPA7_2872 transmembrane sensor; anti-FecI sigma factor FecR 6030575 8361001 Cpin_4825 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124460.1 6029589 R 485918 CDS YP_003124461.1 256423808 8361002 complement(6030623..6031240) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: xau:Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 6031240 8361002 Cpin_4826 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124461.1 6030623 R 485918 CDS YP_003124462.1 256423809 8361003 complement(6031324..6033591) 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: saz:Sama_0293 alpha-1,2-mannosidase; alpha-1,2-mannosidase 6033591 8361003 Cpin_4827 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003124462.1 6031324 R 485918 CDS YP_003124463.1 256423810 8361004 complement(6033837..6035504) 1 NC_013132.1 PFAM: Ricin B lectin; KEGG: scl:sce4592 alpha-L-arabinofuranosidase precursor; Ricin B lectin 6035504 8361004 Cpin_4828 Chitinophaga pinensis DSM 2588 Ricin B lectin YP_003124463.1 6033837 R 485918 CDS YP_003124464.1 256423811 8361005 6035674..6035997 1 NC_013132.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hch:HCH_03203 transcriptional regulator; ArsR family transcriptional regulator 6035997 8361005 Cpin_4829 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003124464.1 6035674 D 485918 CDS YP_003124465.1 256423812 8361006 6036004..6036486 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMc01149 hypothetical protein; activator of Hsp90 ATPase 1 family protein 6036486 8361006 Cpin_4830 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003124465.1 6036004 D 485918 CDS YP_003124466.1 256423813 8361007 6036479..6036874 1 NC_013132.1 KEGG: scl:sce6314 hypothetical protein; hypothetical protein 6036874 8361007 Cpin_4831 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124466.1 6036479 D 485918 CDS YP_003124467.1 256423814 8361008 complement(6036919..6037788) 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: smt:Smal_1231 protein of unknown function DUF6 transmembrane; hypothetical protein 6037788 8361008 Cpin_4832 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124467.1 6036919 R 485918 CDS YP_003124468.1 256423815 8361009 complement(6038112..6039209) 1 NC_013132.1 hypothetical protein 6039209 8361009 Cpin_4833 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124468.1 6038112 R 485918 CDS YP_003124469.1 256423816 8361010 6039365..6039553 1 NC_013132.1 hypothetical protein 6039553 8361010 Cpin_4834 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124469.1 6039365 D 485918 CDS YP_003124470.1 256423817 8361011 6039677..6040498 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr1595 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 6040498 8361011 Cpin_4835 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124470.1 6039677 D 485918 CDS YP_003124471.1 256423818 8361012 6040536..6041438 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 6041438 8361012 Cpin_4836 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124471.1 6040536 D 485918 CDS YP_003124472.1 256423819 8361013 6041623..6044544 1 NC_013132.1 PFAM: FAD linked oxidase domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bra:BRADO2247 oxidoreductase; D-lactate dehydrogenase 6044544 8361013 Cpin_4837 Chitinophaga pinensis DSM 2588 D-lactate dehydrogenase YP_003124472.1 6041623 D 485918 CDS YP_003124473.1 256423820 8361014 6044890..6045471 1 NC_013132.1 PFAM: helix-turn-helix domain protein; cupin; SMART: helix-turn-helix domain protein; KEGG: sfu:Sfum_1154 transcriptional regulator, XRE family; XRE family transcriptional regulator 6045471 8361014 Cpin_4838 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003124473.1 6044890 D 485918 CDS YP_003124474.1 256423821 8361015 6045553..6046695 1 NC_013132.1 TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase; KEGG: dac:Daci_1285 FAD dependent oxidoreductase; FAD dependent oxidoreductase 6046695 8361015 Cpin_4839 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003124474.1 6045553 D 485918 CDS YP_003124475.1 256423822 8361016 6046758..6047420 1 NC_013132.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: predicted protein; HAD-superfamily hydrolase 6047420 8361016 Cpin_4840 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003124475.1 6046758 D 485918 CDS YP_003124476.1 256423823 8361017 complement(6047491..6048903) 1 NC_013132.1 KEGG: mex:Mext_0136 diguanylate cyclase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat- containing protein; PAS/PAC sensor protein 6048903 8361017 Cpin_4841 Chitinophaga pinensis DSM 2588 PAS/PAC sensor protein YP_003124476.1 6047491 R 485918 CDS YP_003124477.1 256423824 8361018 complement(6049018..6049767) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ect:ECIAI39_0671 short-chain dehydrogenase/reductase SDR precursor; short-chain dehydrogenase/reductase SDR 6049767 8361018 Cpin_4842 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124477.1 6049018 R 485918 CDS YP_003124478.1 256423825 8361019 complement(6049805..6052582) 1 NC_013132.1 KEGG: ccs:CCNA_02891 beta-galactosidase; TIGRFAM: mannonate dehydratase; PFAM: Mannonate dehydratase; xylose isomerase; mannonate dehydratase 6052582 8361019 Cpin_4843 Chitinophaga pinensis DSM 2588 mannonate dehydratase YP_003124478.1 6049805 R 485918 CDS YP_003124479.1 256423826 8361020 6053023..6054057 1 NC_013132.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator 6054057 8361020 Cpin_4844 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003124479.1 6053023 D 485918 CDS YP_003124480.1 256423827 8361021 6054092..6056581 1 NC_013132.1 KEGG: pzu:PHZ_c2479 hypothetical protein; hypothetical protein 6056581 8361021 Cpin_4845 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124480.1 6054092 D 485918 CDS YP_003124481.1 256423828 8361022 6056613..6057716 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: sde:Sde_0822 alpha-L-arabinofuranosidase; xylan 1,4-beta-xylosidase 6057716 8361022 Cpin_4846 Chitinophaga pinensis DSM 2588 xylan 1,4-beta-xylosidase YP_003124481.1 6056613 D 485918 CDS YP_003124482.1 256423829 8361023 6057713..6059626 1 NC_013132.1 PFAM: protein of unknown function DUF303 acetylesterase ; glycoside hydrolase family 2 sugar binding; KEGG: cja:CJA_3164 sialic acid-specific 9-O- acetylesterase; hypothetical protein 6059626 8361023 Cpin_4847 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124482.1 6057713 D 485918 CDS YP_003124483.1 256423830 8361024 complement(6059636..6061207) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6061207 8361024 Cpin_4848 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124483.1 6059636 R 485918 CDS YP_003124484.1 256423831 8361025 complement(6061233..6064391) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6064391 8361025 Cpin_4849 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124484.1 6061233 R 485918 CDS YP_003124485.1 256423832 8361026 6064789..6065577 1 NC_013132.1 PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; KEGG: cps:CPS_0756 sensory box sensor histidine kinase/DNA-binding response regulator; AraC family transcriptional regulator 6065577 8361026 Cpin_4850 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124485.1 6064789 D 485918 CDS YP_003124486.1 256423833 8361027 6065665..6067923 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; hypothetical protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: ppd:Ppro_1972 signal transduction histidine kinase; signal transduction histidine kinase 6067923 8361027 Cpin_4851 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003124486.1 6065665 D 485918 CDS YP_003124487.1 256423834 8361028 6068093..6070333 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: ppd:Ppro_3009 hypothetical protein; signal transduction histidine kinase 6070333 8361028 Cpin_4852 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003124487.1 6068093 D 485918 CDS YP_003124488.1 256423835 8361029 6070333..6071706 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: dal:Dalk_0340 two component, sigma54 specific, transcriptional regulator, Fis family; Fis family transcriptional regulator 6071706 8361029 Cpin_4853 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003124488.1 6070333 D 485918 CDS YP_003124489.1 256423836 8361030 complement(6071711..6073336) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: transcriptional regulator, NifA subfamily, Fis family; Fis family sigma-54 specific transcriptional regulator 6073336 8361030 Cpin_4854 Chitinophaga pinensis DSM 2588 Fis family sigma-54 specific transcriptional regulator YP_003124489.1 6071711 R 485918 CDS YP_003124490.1 256423837 8361031 complement(6073569..6075080) 1 NC_013132.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_1703 hypothetical protein; Ricin B lectin 6075080 8361031 Cpin_4855 Chitinophaga pinensis DSM 2588 Ricin B lectin YP_003124490.1 6073569 R 485918 CDS YP_003124491.1 256423838 8361032 complement(6075114..6076823) 1 NC_013132.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: rme:Rmet_1657 conserved hypothetical protein- transmembrane prediction; Ricin B lectin 6076823 8361032 Cpin_4856 Chitinophaga pinensis DSM 2588 Ricin B lectin YP_003124491.1 6075114 R 485918 CDS YP_003124492.1 256423839 8361033 6077161..6078570 1 NC_013132.1 PFAM: protein of unknown function DUF303 acetylesterase KEGG: sus:Acid_3201 sialate O-acetylesterase; sialate O-acetylesterase 6078570 8361033 Cpin_4857 Chitinophaga pinensis DSM 2588 sialate O-acetylesterase YP_003124492.1 6077161 D 485918 CDS YP_003124493.1 256423840 8361034 complement(6078669..6079508) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL3904 AraC family transcriptional regulator; response regulator receiver protein 6079508 8361034 Cpin_4858 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003124493.1 6078669 R 485918 CDS YP_003124494.1 256423841 8361035 complement(6079548..6080489) 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: swd:Swoo_2967 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 6080489 8361035 Cpin_4859 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003124494.1 6079548 R 485918 CDS YP_003124495.1 256423842 8361036 complement(6080692..6081231) 1 NC_013132.1 hypothetical protein 6081231 8361036 Cpin_4860 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124495.1 6080692 R 485918 CDS YP_003124496.1 256423843 8361037 complement(6081250..6081771) 1 NC_013132.1 KEGG: viral A-type inclusion protein; hypothetical protein 6081771 8361037 Cpin_4861 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124496.1 6081250 R 485918 CDS YP_003124497.1 256423844 8361038 complement(6081865..6083031) 1 NC_013132.1 SMART: Hedgehog/intein hint domain protein; KEGG: cvi:CV_2869 hemagglutinin-related protein; Hedgehog/intein hint domain-containing protein 6083031 8361038 Cpin_4862 Chitinophaga pinensis DSM 2588 Hedgehog/intein hint domain-containing protein YP_003124497.1 6081865 R 485918 CDS YP_003124498.1 256423845 8361039 complement(6083031..6083834) 1 NC_013132.1 hypothetical protein 6083834 8361039 Cpin_4863 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124498.1 6083031 R 485918 CDS YP_003124499.1 256423846 8361040 complement(6083839..6085638) 1 NC_013132.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: gsu:GSU0983 hypothetical protein; Rhs element Vgr protein 6085638 8361040 Cpin_4864 Chitinophaga pinensis DSM 2588 Rhs element Vgr protein YP_003124499.1 6083839 R 485918 CDS YP_003124500.1 256423847 8361041 complement(6085660..6086394) 1 NC_013132.1 KEGG: plu:plu3098 hypothetical protein; hypothetical protein 6086394 8361041 Cpin_4865 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124500.1 6085660 R 485918 CDS YP_003124501.1 256423848 8361042 complement(6086430..6087581) 1 NC_013132.1 hypothetical protein 6087581 8361042 Cpin_4866 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124501.1 6086430 R 485918 CDS YP_003124502.1 256423849 8361043 complement(6087597..6088490) 1 NC_013132.1 hypothetical protein 6088490 8361043 Cpin_4867 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124502.1 6087597 R 485918 CDS YP_003124503.1 256423850 8361044 complement(6088517..6089458) 1 NC_013132.1 KEGG: pca:Pcar_2819 hypothetical protein; hypothetical protein 6089458 8361044 Cpin_4868 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124503.1 6088517 R 485918 CDS YP_003124504.1 256423851 8361045 complement(6089469..6091313) 1 NC_013132.1 hypothetical protein 6091313 8361045 Cpin_4869 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124504.1 6089469 R 485918 CDS YP_003124505.1 256423852 8361046 complement(6091335..6091769) 1 NC_013132.1 PFAM: GPW/gp25 family protein; KEGG: plu:plu2393 hypothetical protein; GPW/gp25 family protein 6091769 8361046 Cpin_4870 Chitinophaga pinensis DSM 2588 GPW/gp25 family protein YP_003124505.1 6091335 R 485918 CDS YP_003124506.1 256423853 8361047 complement(6091845..6092237) 1 NC_013132.1 hypothetical protein 6092237 8361047 Cpin_4871 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124506.1 6091845 R 485918 CDS YP_003124507.1 256423854 8361048 complement(6092280..6093650) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6093650 8361048 Cpin_4872 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124507.1 6092280 R 485918 CDS YP_003124508.1 256423855 8361049 complement(6093681..6094127) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6094127 8361049 Cpin_4873 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124508.1 6093681 R 485918 CDS YP_003124509.1 256423856 8361050 complement(6094159..6096630) 1 NC_013132.1 PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bbt:BBta_7789 chaperone ClpB; ATPase AAA 6096630 8361050 Cpin_4874 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003124509.1 6094159 R 485918 CDS YP_003124510.1 256423857 8361051 complement(6096639..6098975) 1 NC_013132.1 KEGG: ent:Ent638_4236 von Willebrand factor, type A; hypothetical protein 6098975 8361051 Cpin_4875 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124510.1 6096639 R 485918 CDS YP_003124511.1 256423858 8361052 complement(6098982..6099923) 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sil:SPO0571 PKD domain-containing protein; PKD domain-containing protein 6099923 8361052 Cpin_4876 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003124511.1 6098982 R 485918 CDS YP_003124512.1 256423859 8361053 complement(6099970..6100464) 1 NC_013132.1 hypothetical protein 6100464 8361053 Cpin_4877 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124512.1 6099970 R 485918 CDS YP_003124513.1 256423860 8361054 6100686..6102122 1 NC_013132.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sat:SYN_00032 cell wall degradation protein; ErfK/YbiS/YcfS/YnhG family protein 6102122 8361054 Cpin_4878 Chitinophaga pinensis DSM 2588 ErfK/YbiS/YcfS/YnhG family protein YP_003124513.1 6100686 D 485918 CDS YP_003124514.1 256423861 8361055 6102277..6103317 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: xau:Xaut_1334 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 6103317 8361055 Cpin_4879 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003124514.1 6102277 D 485918 CDS YP_003124515.1 256423862 8361056 complement(6103477..6103923) 1 NC_013132.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: mlo:mll6688 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 6103923 8361056 Cpin_4880 Chitinophaga pinensis DSM 2588 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_003124515.1 6103477 R 485918 CDS YP_003124516.1 256423863 8361057 complement(6104033..6106120) 1 NC_013132.1 PFAM: sulfatase; KEGG: gur:Gura_1625 sulfatase; sulfatase 6106120 8361057 Cpin_4881 Chitinophaga pinensis DSM 2588 sulfatase YP_003124516.1 6104033 R 485918 CDS YP_003124517.1 256423864 8361058 6106312..6106986 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rde:RD1_2601 transcriptional regulator CtrA; winged helix family two component transcriptional regulator 6106986 8361058 Cpin_4882 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003124517.1 6106312 D 485918 CDS YP_003124518.1 256423865 8361059 6106983..6108026 1 NC_013132.1 PFAM: histidine kinase A domain protein; ATP- binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP- binding region ATPase domain protein; KEGG: sty:STY1127 histidine kinase; histidine kinase 6108026 8361059 Cpin_4883 Chitinophaga pinensis DSM 2588 histidine kinase YP_003124518.1 6106983 D 485918 CDS YP_003124519.1 256423866 8361060 6108078..6110480 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: pzu:PHZ_c3264 TonB-dependent receptor; TonB-dependent receptor plug 6110480 8361060 Cpin_4884 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124519.1 6108078 D 485918 CDS YP_003124520.1 256423867 8361061 6110780..6112024 1 NC_013132.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: eba:ebA3111 exonuclease SbcD; nuclease SbcCD subunit D 6112024 8361061 Cpin_4885 Chitinophaga pinensis DSM 2588 nuclease SbcCD subunit D YP_003124520.1 6110780 D 485918 CDS YP_003124521.1 256423868 8361062 6112031..6115765 1 NC_013132.1 PFAM: SMC domain protein; KEGG: pfl:PFL_2729 nuclease SbcCD, C subunit; SMC domain-containing protein 6115765 8361062 Cpin_4886 Chitinophaga pinensis DSM 2588 SMC domain-containing protein YP_003124521.1 6112031 D 485918 CDS YP_003124522.1 256423869 8361063 complement(6115768..6116637) 1 NC_013132.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: dol:Dole_1445 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 6116637 8361063 Cpin_4887 Chitinophaga pinensis DSM 2588 lipid A biosynthesis acyltransferase YP_003124522.1 6115768 R 485918 CDS YP_003124523.1 256423870 8361064 complement(6116959..6117549) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nmu:Nmul_A1288 response regulator receiver domain-containing protein; response regulator receiver protein 6117549 8361064 Cpin_4888 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003124523.1 6116959 R 485918 CDS YP_003124524.1 256423871 8361065 complement(6117840..6119609) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6119609 8361065 Cpin_4889 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124524.1 6117840 R 485918 CDS YP_003124525.1 256423872 8361066 complement(6119639..6120046) 1 NC_013132.1 hypothetical protein 6120046 8361066 Cpin_4890 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124525.1 6119639 R 485918 CDS YP_003124526.1 256423873 8361067 6120154..6120645 1 NC_013132.1 hypothetical protein 6120645 8361067 Cpin_4891 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124526.1 6120154 D 485918 CDS YP_003124527.1 256423874 8361068 complement(6120707..6121834) 1 NC_013132.1 KEGG: sus:Acid_1463 hypothetical protein; hypothetical protein 6121834 8361068 Cpin_4892 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124527.1 6120707 R 485918 CDS YP_003124528.1 256423875 8361069 6121960..6123255 1 NC_013132.1 hypothetical protein 6123255 8361069 Cpin_4893 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124528.1 6121960 D 485918 CDS YP_003124529.1 256423876 8361070 6123347..6123787 1 NC_013132.1 hypothetical protein 6123787 8361070 Cpin_4894 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124529.1 6123347 D 485918 CDS YP_003124530.1 256423877 8361071 complement(6124127..6124621) 1 NC_013132.1 hypothetical protein 6124621 8361071 Cpin_4895 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124530.1 6124127 R 485918 CDS YP_003124531.1 256423878 8361072 6124996..6125745 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A1489 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 6125745 8361072 Cpin_4896 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124531.1 6124996 D 485918 CDS YP_003124532.1 256423879 8361073 6125794..6126375 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: rme:Rmet_4307 transcriptional regulator, TetR family; TetR family transcriptional regulator 6126375 8361073 Cpin_4897 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003124532.1 6125794 D 485918 CDS YP_003124533.1 256423880 8361074 6126645..6127199 1 NC_013132.1 PFAM: hypothetical protein; KEGG: mag:amb1460 microcystin-dependent protein; hypothetical protein 6127199 8361074 Cpin_4898 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124533.1 6126645 D 485918 CDS YP_003124534.1 256423881 8361075 6127239..6127790 1 NC_013132.1 PFAM: hypothetical protein; KEGG: cja:CJA_0593 microcystin dependent protein; MdpB; hypothetical protein 6127790 8361075 Cpin_4899 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124534.1 6127239 D 485918 CDS YP_003124535.1 256423882 8361076 6127815..6128393 1 NC_013132.1 PFAM: hypothetical protein; KEGG: cja:CJA_0593 microcystin dependent protein; MdpB; hypothetical protein 6128393 8361076 Cpin_4900 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124535.1 6127815 D 485918 CDS YP_003124536.1 256423883 8361077 6128402..6129307 1 NC_013132.1 PFAM: formyl transferase; KEGG: ppd:Ppro_0055 methionyl-tRNA formyltransferase; formyl transferase 6129307 8361077 Cpin_4901 Chitinophaga pinensis DSM 2588 formyl transferase YP_003124536.1 6128402 D 485918 CDS YP_003124537.1 256423884 8361078 complement(6129344..6129478) 1 NC_013132.1 hypothetical protein 6129478 8361078 Cpin_4902 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124537.1 6129344 R 485918 CDS YP_003124538.1 256423885 8361079 complement(6129545..6129673) 1 NC_013132.1 hypothetical protein 6129673 8361079 Cpin_4903 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124538.1 6129545 R 485918 CDS YP_003124539.1 256423886 8361080 complement(6129703..6131544) 1 NC_013132.1 PFAM: asparagine synthase; KEGG: mlo:mll5256 asparagine synthetase; asparagine synthase 6131544 8361080 Cpin_4904 Chitinophaga pinensis DSM 2588 asparagine synthase YP_003124539.1 6129703 R 485918 CDS YP_003124540.1 256423887 8361081 complement(6131548..6131961) 1 NC_013132.1 KEGG: gur:Gura_1356 hypothetical protein; hypothetical protein 6131961 8361081 Cpin_4905 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124540.1 6131548 R 485918 CDS YP_003124541.1 256423888 8361082 complement(6131958..6132854) 1 NC_013132.1 KEGG: mag:amb1453 hypothetical protein; HPr kinase 6132854 8361082 Cpin_4906 Chitinophaga pinensis DSM 2588 HPr kinase YP_003124541.1 6131958 R 485918 CDS YP_003124542.1 256423889 8361083 6132930..6133229 1 NC_013132.1 KEGG: ppd:Ppro_0048 hypothetical protein; hypothetical protein 6133229 8361083 Cpin_4907 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124542.1 6132930 D 485918 CDS YP_003124543.1 256423890 8361084 6133234..6134334 1 NC_013132.1 KEGG: ppd:Ppro_0062 hypothetical protein; hypothetical protein 6134334 8361084 Cpin_4908 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124543.1 6133234 D 485918 CDS YP_003124544.1 256423891 8361085 complement(6134396..6137143) 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; KEGG: cja:CJA_2985 glycoside hydrolase, , gly16A; coagulation factor 5/8 type domain-containing protein 6137143 8361085 Cpin_4909 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003124544.1 6134396 R 485918 CDS YP_003124545.1 256423892 8361086 6137515..6138000 1 NC_013132.1 KEGG: afe:Lferr_0291 hypothetical protein; hypothetical protein 6138000 8361086 Cpin_4910 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124545.1 6137515 D 485918 CDS YP_003124546.1 256423893 8361087 6138318..6139874 1 NC_013132.1 PFAM: spore coat protein CotH; KEGG: scl:sce8379 hypothetical protein; spore coat protein CotH 6139874 8361087 Cpin_4911 Chitinophaga pinensis DSM 2588 spore coat protein CotH YP_003124546.1 6138318 D 485918 CDS YP_003124547.1 256423894 8361089 complement(6140182..6140676) 1 NC_013132.1 PFAM: transcription activator effector binding; KEGG: sdn:Sden_1132 transcription activator, effector binding; transcriptional activator ligand binding domain-containing protein 6140676 8361089 Cpin_4913 Chitinophaga pinensis DSM 2588 transcriptional activator ligand binding domain-containing protein YP_003124547.1 6140182 R 485918 CDS YP_003124548.1 256423895 8361090 6141091..6141603 1 NC_013132.1 KEGG: pol:Bpro_5314 YapH protein; YapH protein 6141603 8361090 Cpin_4914 Chitinophaga pinensis DSM 2588 YapH protein YP_003124548.1 6141091 D 485918 CDS YP_003124549.1 256423896 8361091 6141690..6142520 1 NC_013132.1 KEGG: pol:Bpro_5311 hypothetical protein; hypothetical protein 6142520 8361091 Cpin_4915 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124549.1 6141690 D 485918 CDS YP_003124550.1 256423897 8361092 6142579..6150531 1 NC_013132.1 KEGG: bcj:BCAS0321 hypothetical glycine-rich autotransporter protein; hypothetical protein 6150531 8361092 Cpin_4916 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124550.1 6142579 D 485918 CDS YP_003124551.1 256423898 8361093 6150539..6151042 1 NC_013132.1 KEGG: nar:Saro_1212 hypothetical protein; hypothetical protein 6151042 8361093 Cpin_4917 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124551.1 6150539 D 485918 CDS YP_003124552.1 256423899 8361094 6151050..6153692 1 NC_013132.1 KEGG: pol:Bpro_5310 hypothetical protein; hypothetical protein 6153692 8361094 Cpin_4918 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124552.1 6151050 D 485918 CDS YP_003124553.1 256423900 8361095 complement(6153693..6154004) 1 NC_013132.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: jan:Jann_2598 hypothetical protein; L-rhamnose 1-epimerase 6154004 8361095 Cpin_4919 Chitinophaga pinensis DSM 2588 L-rhamnose 1-epimerase YP_003124553.1 6153693 R 485918 CDS YP_003124554.1 256423901 8361096 complement(6154023..6154604) 1 NC_013132.1 PFAM: protein of unknown function DUF162; KEGG: acp:A2cp1_3175 protein of unknown function DUF162; hypothetical protein 6154604 8361096 Cpin_4920 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124554.1 6154023 R 485918 CDS YP_003124555.1 256423902 8361097 complement(6154652..6156025) 1 NC_013132.1 PFAM: protein of unknown function DUF162; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: acp:A2cp1_3174 protein of unknown function DUF162; hypothetical protein 6156025 8361097 Cpin_4921 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124555.1 6154652 R 485918 CDS YP_003124556.1 256423903 8361098 complement(6156101..6156841) 1 NC_013132.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: gox:GOX1356 oxidoreductase, iron-sulphur binding subunit; hypothetical protein 6156841 8361098 Cpin_4922 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124556.1 6156101 R 485918 CDS YP_003124557.1 256423904 8361099 complement(6156847..6158229) 1 NC_013132.1 PFAM: carbohydrate kinase FGGY; KEGG: dsh:Dshi_2429 carbohydrate kinase FGGY; carbohydrate kinase FGGY 6158229 8361099 Cpin_4923 Chitinophaga pinensis DSM 2588 carbohydrate kinase FGGY YP_003124557.1 6156847 R 485918 CDS YP_003124558.1 256423905 8361100 complement(6158412..6159686) 1 NC_013132.1 PFAM: xylose isomerase; KEGG: rlt:Rleg2_5806 L-rhamnose catabolism isomerase; xylose isomerase 6159686 8361100 Cpin_4924 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003124558.1 6158412 R 485918 CDS YP_003124559.1 256423906 8361101 complement(6159836..6161959) 1 NC_013132.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; class II aldolase/adducin family protein; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: dsh:Dshi_2436 short chain dehydrogenase; short chain dehydrogenase 6161959 8361101 Cpin_4925 Chitinophaga pinensis DSM 2588 short chain dehydrogenase YP_003124559.1 6159836 R 485918 CDS YP_003124560.1 256423907 8361102 complement(6162001..6163053) 1 NC_013132.1 transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter 6163053 8361102 Cpin_4926 Chitinophaga pinensis DSM 2588 rhamnose-proton symporter YP_003124560.1 6162001 R 485918 CDS YP_003124561.1 256423908 8361103 complement(6163208..6163822) 1 NC_013132.1 hypothetical protein 6163822 8361103 Cpin_4927 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124561.1 6163208 R 485918 CDS YP_003124562.1 256423909 8361104 complement(6163867..6165846) 1 NC_013132.1 KEGG: hch:HCH_04931 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 6165846 8361104 Cpin_4928 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003124562.1 6163867 R 485918 CDS YP_003124563.1 256423910 8361105 complement(6165944..6166969) 1 NC_013132.1 PFAM: Luciferase-like monooxygenase; KEGG: bsu:BSU38100 hypothetical protein; luciferase-like monooxygenase 6166969 8361105 Cpin_4929 Chitinophaga pinensis DSM 2588 luciferase-like monooxygenase YP_003124563.1 6165944 R 485918 CDS YP_003124564.1 256423911 8361106 complement(6167094..6167540) 1 NC_013132.1 KEGG: mca:MCA1928 hypothetical protein; hypothetical protein 6167540 8361106 Cpin_4930 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124564.1 6167094 R 485918 CDS YP_003124565.1 256423912 8361107 complement(6167626..6168417) 1 NC_013132.1 KEGG: noc:Noc_1350 hypothetical protein; hypothetical protein 6168417 8361107 Cpin_4931 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124565.1 6167626 R 485918 CDS YP_003124566.1 256423913 8361108 complement(6168491..6169771) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sus:Acid_5478 integral membrane sensor signal transduction histidine kinase; histidine kinase 6169771 8361108 Cpin_4932 Chitinophaga pinensis DSM 2588 histidine kinase YP_003124566.1 6168491 R 485918 CDS YP_003124567.1 256423914 8361109 complement(6169768..6170442) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: vfi:VF_A0436 transcriptional regulatory protein; winged helix family two component transcriptional regulator 6170442 8361109 Cpin_4933 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003124567.1 6169768 R 485918 CDS YP_003124568.1 256423915 8361110 complement(6170568..6171854) 1 NC_013132.1 KEGG: mms:mma_1162 magnesium transporter accessory protein; magnesium transporter accessory protein 6171854 8361110 Cpin_4934 Chitinophaga pinensis DSM 2588 magnesium transporter accessory protein YP_003124568.1 6170568 R 485918 CDS YP_003124569.1 256423916 8361111 complement(6171895..6174099) 1 NC_013132.1 KEGG: dps:DP1987 5'-3' DNA helicase; 5'-3' DNA helicase 6174099 8361111 Cpin_4935 Chitinophaga pinensis DSM 2588 5'-3' DNA helicase YP_003124569.1 6171895 R 485918 CDS YP_003124570.1 256423917 8361112 complement(6174151..6175044) 1 NC_013132.1 PFAM: protein of unknown function DUF62; KEGG: aha:AHA_0746 hypothetical protein; hypothetical protein 6175044 8361112 Cpin_4936 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124570.1 6174151 R 485918 CDS YP_003124571.1 256423918 8361113 6175167..6175505 1 NC_013132.1 PFAM: protein of unknown function DUF326; KEGG: sew:SeSA_A1351 ferredoxin; hypothetical protein 6175505 8361113 Cpin_4937 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124571.1 6175167 D 485918 CDS YP_003124572.1 256423919 8361114 6175505..6176053 1 NC_013132.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: hch:HCH_02572 guanosine polyphosphate pyrophosphohydrolase/synthetases; metal dependent phosphohydrolase 6176053 8361114 Cpin_4938 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003124572.1 6175505 D 485918 CDS YP_003124573.1 256423920 8361115 complement(6176362..6177582) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein; hypothetical protein 6177582 8361115 Cpin_4939 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124573.1 6176362 R 485918 CDS YP_003124574.1 256423921 8361116 complement(6177585..6178334) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_3037 ABC transporter-related protein; ABC transporter 6178334 8361116 Cpin_4940 Chitinophaga pinensis DSM 2588 ABC transporter YP_003124574.1 6177585 R 485918 CDS YP_003124575.1 256423922 8361117 complement(6178331..6179590) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_1129 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 6179590 8361117 Cpin_4941 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003124575.1 6178331 R 485918 CDS YP_003124576.1 256423923 8361118 complement(6179607..6180956) 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: dal:Dalk_4861 outer membrane efflux protein; outer membrane efflux protein 6180956 8361118 Cpin_4942 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003124576.1 6179607 R 485918 CDS YP_003124577.1 256423924 8361119 complement(6181266..6181514) 1 NC_013132.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sfu:Sfum_0490 transcriptional regulator, fis family; XRE family transcriptional regulator 6181514 8361119 Cpin_4943 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003124577.1 6181266 R 485918 CDS YP_003124578.1 256423925 8361120 complement(6181730..6181957) 1 NC_013132.1 hypothetical protein 6181957 8361120 Cpin_4944 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124578.1 6181730 R 485918 CDS YP_003124579.1 256423926 8361121 complement(6182401..6184383) 1 NC_013132.1 PFAM: alpha-L-arabinofuranosidase; carbohydrate-binding CenC domain protein; KEGG: sus:Acid_2992 alpha-N-arabinofuranosidase; alpha-L-arabinofuranosidase 6184383 8361121 Cpin_4945 Chitinophaga pinensis DSM 2588 alpha-L-arabinofuranosidase YP_003124579.1 6182401 R 485918 CDS YP_003124580.1 256423927 8361122 6184904..6185587 1 NC_013132.1 KEGG: GJ14616 gene product from transcript GJ14616- RA; hypothetical protein 6185587 8361122 Cpin_4946 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124580.1 6184904 D 485918 CDS YP_003124581.1 256423928 8361123 complement(6185657..6186199) 1 NC_013132.1 hypothetical protein 6186199 8361123 Cpin_4947 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124581.1 6185657 R 485918 CDS YP_003124582.1 256423929 8361124 complement(6186266..6186634) 1 NC_013132.1 hypothetical protein 6186634 8361124 Cpin_4948 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124582.1 6186266 R 485918 CDS YP_003124583.1 256423930 8361125 complement(6186956..6187162) 1 NC_013132.1 hypothetical protein 6187162 8361125 Cpin_4949 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124583.1 6186956 R 485918 CDS YP_003124584.1 256423931 8361126 complement(6187173..6189419) 1 NC_013132.1 TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; haloacid dehalogenase; KEGG: ppd:Ppro_3639 heavy metal translocating P- type ATPase; copper-translocating P-type ATPase 6189419 8361126 Cpin_4950 Chitinophaga pinensis DSM 2588 copper-translocating P-type ATPase YP_003124584.1 6187173 R 485918 CDS YP_003124585.1 256423932 8361127 complement(6189510..6190073) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: smd:Smed_5215 helix-turn-helix-domain containing protein AraC type; AraC family transcriptional regulator 6190073 8361127 Cpin_4951 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124585.1 6189510 R 485918 CDS YP_003124586.1 256423933 8361128 6190205..6195829 1 NC_013132.1 KEGG: aba:Acid345_0928 alpha-2-macroglobulin-like; large extracellular alpha-helical protein 6195829 8361128 Cpin_4952 Chitinophaga pinensis DSM 2588 large extracellular alpha-helical protein YP_003124586.1 6190205 D 485918 CDS YP_003124587.1 256423934 8361129 6195841..6196689 1 NC_013132.1 hypothetical protein 6196689 8361129 Cpin_4953 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124587.1 6195841 D 485918 CDS YP_003124588.1 256423935 8361130 complement(6196883..6199933) 1 NC_013132.1 KEGG: pat:Patl_3604 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold- 3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein; multi-sensor hybrid histidine kinase 6199933 8361130 Cpin_4954 Chitinophaga pinensis DSM 2588 multi-sensor hybrid histidine kinase YP_003124588.1 6196883 R 485918 CDS YP_003124589.1 256423936 8361131 complement(6199937..6201103) 1 NC_013132.1 PFAM: lycopene beta and epsilon cyclase; KEGG: pub:SAR11_0122 lycopene cyclase; lycopene beta and epsilon cyclase 6201103 8361131 Cpin_4955 Chitinophaga pinensis DSM 2588 lycopene beta and epsilon cyclase YP_003124589.1 6199937 R 485918 CDS YP_003124590.1 256423937 8361132 6201285..6201917 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kpn:KPN_01489 regulatory protein MarR; MarR family transcriptional regulator 6201917 8361132 Cpin_4956 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003124590.1 6201285 D 485918 CDS YP_003124591.1 256423938 8361133 complement(6201920..6202390) 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bha:BH1534 hypothetical protein; activator of Hsp90 ATPase 1 family protein 6202390 8361133 Cpin_4957 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003124591.1 6201920 R 485918 CDS YP_003124592.1 256423939 8361134 complement(6202482..6203843) 1 NC_013132.1 KEGG: gbm:Gbem_1803 eight transmembrane protein EpsH; hypothetical protein 6203843 8361134 Cpin_4958 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124592.1 6202482 R 485918 CDS YP_003124593.1 256423940 8361135 complement(6203836..6206316) 1 NC_013132.1 KEGG: vvy:VVA1267 hypothetical protein; hypothetical protein 6206316 8361135 Cpin_4959 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124593.1 6203836 R 485918 CDS YP_003124594.1 256423941 8361136 6206588..6206869 1 NC_013132.1 PFAM: protein of unknown function DUF427; KEGG: pnu:Pnuc_1659 hypothetical protein; hypothetical protein 6206869 8361136 Cpin_4960 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124594.1 6206588 D 485918 CDS YP_003124595.1 256423942 8361137 6206896..6208278 1 NC_013132.1 Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 6208278 8361137 Cpin_4961 Chitinophaga pinensis DSM 2588 mercuric reductase YP_003124595.1 6206896 D 485918 CDS YP_003124596.1 256423943 8361138 6208322..6209308 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spe:Spro_1447 ABC transporter-related protein; ABC transporter 6209308 8361138 Cpin_4962 Chitinophaga pinensis DSM 2588 ABC transporter YP_003124596.1 6208322 D 485918 CDS YP_003124597.1 256423944 8361139 6209283..6210851 1 NC_013132.1 PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC- type glycine betaine transport system; KEGG: bcz:BCZK2060 glycine betaine/choline ABC transporter, ATP-binding protein; glycine/betaine ABC transporter ATP-binding protein 6210851 8361139 Cpin_4963 Chitinophaga pinensis DSM 2588 glycine/betaine ABC transporter ATP-binding protein YP_003124597.1 6209283 D 485918 CDS YP_003124598.1 256423945 8361140 6210864..6212015 1 NC_013132.1 PFAM: protein of unknown function DUF323; KEGG: azo:azo0700 hypothetical protein; hypothetical protein 6212015 8361140 Cpin_4964 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124598.1 6210864 D 485918 CDS YP_003124599.1 256423946 8361141 6212045..6213037 1 NC_013132.1 KEGG: swd:Swoo_2444 hypothetical protein; hypothetical protein 6213037 8361141 Cpin_4965 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124599.1 6212045 D 485918 CDS YP_003124600.1 256423947 8361142 complement(6213117..6213605) 1 NC_013132.1 KEGG: aba:Acid345_2354 hypothetical protein; hypothetical protein 6213605 8361142 Cpin_4966 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124600.1 6213117 R 485918 CDS YP_003124601.1 256423948 8361143 6213710..6214267 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: cvi:CV_2487 TetR family transcriptional regulator; TetR family transcriptional regulator 6214267 8361143 Cpin_4967 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003124601.1 6213710 D 485918 CDS YP_003124602.1 256423949 8361144 6214429..6215682 1 NC_013132.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: hypothetical protein; K09458 3-oxoacyl-; 3-oxoacyl-ACP synthase 6215682 8361144 Cpin_4968 Chitinophaga pinensis DSM 2588 3-oxoacyl-ACP synthase YP_003124602.1 6214429 D 485918 CDS YP_003124603.1 256423950 8361145 complement(6215699..6215926) 1 NC_013132.1 KEGG: swp:swp_1441 hypothetical protein; hypothetical protein 6215926 8361145 Cpin_4969 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124603.1 6215699 R 485918 CDS YP_003124604.1 256423951 8361146 6216334..6217488 1 NC_013132.1 KEGG: sus:Acid_3355 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 6217488 8361146 Cpin_4970 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003124604.1 6216334 D 485918 CDS YP_003124605.1 256423952 8361147 6217510..6217923 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0829 response regulator receiver protein; response regulator receiver 6217923 8361147 Cpin_4971 Chitinophaga pinensis DSM 2588 response regulator receiver YP_003124605.1 6217510 D 485918 CDS YP_003124606.1 256423953 8361148 complement(6217918..6219150) 1 NC_013132.1 hypothetical protein 6219150 8361148 Cpin_4972 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124606.1 6217918 R 485918 CDS YP_003124607.1 256423954 8361149 complement(6219283..6219960) 1 NC_013132.1 hypothetical protein 6219960 8361149 Cpin_4973 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124607.1 6219283 R 485918 CDS YP_003124608.1 256423955 8361150 complement(6219980..6221890) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6221890 8361150 Cpin_4974 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124608.1 6219980 R 485918 CDS YP_003124609.1 256423956 8361151 complement(6221890..6225057) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6225057 8361151 Cpin_4975 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124609.1 6221890 R 485918 CDS YP_003124610.1 256423957 8361152 6225424..6226188 1 NC_013132.1 hypothetical protein 6226188 8361152 Cpin_4976 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124610.1 6225424 D 485918 CDS YP_003124611.1 256423958 8361153 complement(6226452..6226874) 1 NC_013132.1 hypothetical protein 6226874 8361153 Cpin_4977 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124611.1 6226452 R 485918 CDS YP_003124612.1 256423959 8361154 complement(6226917..6227345) 1 NC_013132.1 hypothetical protein 6227345 8361154 Cpin_4978 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124612.1 6226917 R 485918 CDS YP_003124613.1 256423960 8361155 6227680..6231936 1 NC_013132.1 PFAM: carbohydrate-binding protein; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; PKD domain containing protein; hypothetical protein; KEGG: sat:SYN_01126 hypothetical protein; carbohydrate-binding protein 6231936 8361155 Cpin_4979 Chitinophaga pinensis DSM 2588 carbohydrate-binding protein YP_003124613.1 6227680 D 485918 CDS YP_003124614.1 256423961 8361156 complement(6232154..6232546) 1 NC_013132.1 KEGG: aba:Acid345_0172 integral membrane protein; integral membrane protein 6232546 8361156 Cpin_4980 Chitinophaga pinensis DSM 2588 integral membrane protein YP_003124614.1 6232154 R 485918 CDS YP_003124615.1 256423962 8361157 complement(6232558..6232911) 1 NC_013132.1 KEGG: scl:sce7877 hypothetical protein; hypothetical protein 6232911 8361157 Cpin_4981 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124615.1 6232558 R 485918 CDS YP_003124616.1 256423963 8361158 6233113..6234009 1 NC_013132.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sus:Acid_6667 LysR family transcriptional regulator; LysR family transcriptional regulator 6234009 8361158 Cpin_4982 Chitinophaga pinensis DSM 2588 LysR family transcriptional regulator YP_003124616.1 6233113 D 485918 CDS YP_003124617.1 256423964 8361159 6234088..6234357 1 NC_013132.1 hypothetical protein 6234357 8361159 Cpin_4983 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124617.1 6234088 D 485918 CDS YP_003124618.1 256423965 8361160 complement(6234362..6234832) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6234832 8361160 Cpin_4984 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124618.1 6234362 R 485918 CDS YP_003124619.1 256423966 8361161 complement(6234835..6235353) 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: hypothetical protein; activator of Hsp90 ATPase 1 family protein 6235353 8361161 Cpin_4985 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003124619.1 6234835 R 485918 CDS YP_003124620.1 256423967 8361162 complement(6235394..6236062) 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: vha:VIBHAR_04777 NAD(P)H quinone oxidoreductase; ribosyldihydronicotinamide dehydrogenase 6236062 8361162 Cpin_4986 Chitinophaga pinensis DSM 2588 ribosyldihydronicotinamide dehydrogenase YP_003124620.1 6235394 R 485918 CDS YP_003124621.1 256423968 8361163 6236163..6236540 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: oca:OCAR_5707 helix-turn-helix, HxlR type; HxlR family transcriptional regulator 6236540 8361163 Cpin_4987 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003124621.1 6236163 D 485918 CDS YP_003124622.1 256423969 8361164 6236644..6237120 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sus:Acid_2482 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 6237120 8361164 Cpin_4988 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124622.1 6236644 D 485918 CDS YP_003124623.1 256423970 8361165 6237124..6237672 1 NC_013132.1 hypothetical protein 6237672 8361165 Cpin_4989 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124623.1 6237124 D 485918 CDS YP_003124624.1 256423971 8361166 complement(6237678..6238082) 1 NC_013132.1 KEGG: hch:HCH_00951 hypothetical protein; hypothetical protein 6238082 8361166 Cpin_4990 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124624.1 6237678 R 485918 CDS YP_003124625.1 256423972 8361167 complement(6238082..6238180) 1 NC_013132.1 hypothetical protein 6238180 8361167 Cpin_4991 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124625.1 6238082 R 485918 CDS YP_003124626.1 256423973 8361168 6238644..6241745 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6241745 8361168 Cpin_4992 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124626.1 6238644 D 485918 CDS YP_003124627.1 256423974 8361169 6241757..6243565 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6243565 8361169 Cpin_4993 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124627.1 6241757 D 485918 CDS YP_003124628.1 256423975 8361170 complement(6243620..6245917) 1 NC_013132.1 KEGG: sde:Sde_3037 glycosyl hydrolase; PFAM: glycoside hydrolase, family 20, catalytic core; PA14 domain protein; beta-N-acetylhexosaminidase- like; SMART: PA14 domain protein; beta-N-acetylhexosaminidase 6245917 8361170 Cpin_4994 Chitinophaga pinensis DSM 2588 beta-N-acetylhexosaminidase YP_003124628.1 6243620 R 485918 CDS YP_003124629.1 256423976 8361171 complement(6246014..6246652) 1 NC_013132.1 PFAM: pseudouridine synthase; KEGG: shl:Shal_0812 pseudouridine synthase; pseudouridine synthase 6246652 8361171 Cpin_4995 Chitinophaga pinensis DSM 2588 pseudouridine synthase YP_003124629.1 6246014 R 485918 CDS YP_003124630.1 256423977 8361172 6246826..6249228 1 NC_013132.1 PFAM: protein of unknown function DUF1680; coagulation factor 5/8 type domain protein; KEGG: sus:Acid_3381 hypothetical protein; hypothetical protein 6249228 8361172 Cpin_4996 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124630.1 6246826 D 485918 CDS YP_003124631.1 256423978 8361173 6249257..6250078 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: csa:Csal_2814 beta-lactamase-like protein; beta-lactamase domain-containing protein 6250078 8361173 Cpin_4997 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003124631.1 6249257 D 485918 CDS YP_003124632.1 256423979 8361174 6250167..6251465 1 NC_013132.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: afw:Anae109_1010 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 6251465 8361174 Cpin_4998 Chitinophaga pinensis DSM 2588 acetyl-CoA hydrolase/transferase YP_003124632.1 6250167 D 485918 CDS YP_003124633.1 256423980 8361175 complement(6251469..6251867) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: ban:BA3457 hypothetical protein; HxlR family transcriptional regulator 6251867 8361175 Cpin_4999 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003124633.1 6251469 R 485918 CDS YP_003124634.1 256423981 8361176 6251985..6252686 1 NC_013132.1 PFAM: DSBA oxidoreductase; KEGG: scl:sce1376 DSBA oxidoreductase; DSBA oxidoreductase 6252686 8361176 Cpin_5000 Chitinophaga pinensis DSM 2588 DSBA oxidoreductase YP_003124634.1 6251985 D 485918 CDS YP_003124635.1 256423982 8361177 6252900..6253958 1 NC_013132.1 KEGG: scl:sce6690 hypothetical protein; hypothetical protein 6253958 8361177 Cpin_5001 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124635.1 6252900 D 485918 CDS YP_003124636.1 256423983 8361178 6253983..6255314 1 NC_013132.1 PFAM: peptidase S41; SMART: peptidase S41; KEGG: sus:Acid_0918 peptidase S41; peptidase S41 6255314 8361178 Cpin_5002 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003124636.1 6253983 D 485918 CDS YP_003124637.1 256423984 8361179 complement(6255392..6256393) 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: bba:Bd1437 membrane protein; hypothetical protein 6256393 8361179 Cpin_5003 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124637.1 6255392 R 485918 CDS YP_003124638.1 256423985 8361180 6256668..6257252 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator; TetR family transcriptional regulator 6257252 8361180 Cpin_5004 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003124638.1 6256668 D 485918 CDS YP_003124639.1 256423986 8361181 6257316..6258056 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bsu:BSU38540 involved in lipoteichoic acid biosynthesis; short-chain dehydrogenase/reductase SDR 6258056 8361181 Cpin_5005 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124639.1 6257316 D 485918 CDS YP_003124640.1 256423987 8361182 6258124..6259665 1 NC_013132.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_2706 EmrB/QacA family drug resistance transporter; EmrB/QacA subfamily drug resistance transporter 6259665 8361182 Cpin_5006 Chitinophaga pinensis DSM 2588 EmrB/QacA subfamily drug resistance transporter YP_003124640.1 6258124 D 485918 CDS YP_003124641.1 256423988 8361183 6259745..6260389 1 NC_013132.1 PFAM: methyltransferase type 12; KEGG: abc:ACICU_01414 SAM-dependent methyltransferase; type 12 methyltransferase 6260389 8361183 Cpin_5007 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003124641.1 6259745 D 485918 CDS YP_003124642.1 256423989 8361184 complement(6260419..6261315) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR; K07124; short-chain dehydrogenase/reductase SDR 6261315 8361184 Cpin_5008 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124642.1 6260419 R 485918 CDS YP_003124643.1 256423990 8361185 complement(6261336..6261548) 1 NC_013132.1 hypothetical protein 6261548 8361185 Cpin_5009 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124643.1 6261336 R 485918 CDS YP_003124644.1 256423991 8361186 complement(6261711..6262103) 1 NC_013132.1 hypothetical protein 6262103 8361186 Cpin_5010 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124644.1 6261711 R 485918 CDS YP_003124645.1 256423992 8361187 6262431..6263150 1 NC_013132.1 PFAM: pirin; KEGG: par:Psyc_1402 pirin family proteins; pirin 6263150 8361187 Cpin_5011 Chitinophaga pinensis DSM 2588 pirin YP_003124645.1 6262431 D 485918 CDS YP_003124646.1 256423993 8361188 6263233..6263808 1 NC_013132.1 PFAM: nitroreductase; KEGG: oxidoreductase protein; nitroreductase 6263808 8361188 Cpin_5012 Chitinophaga pinensis DSM 2588 nitroreductase YP_003124646.1 6263233 D 485918 CDS YP_003124647.1 256423994 8361189 6263819..6264130 1 NC_013132.1 hypothetical protein 6264130 8361189 Cpin_5013 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124647.1 6263819 D 485918 CDS YP_003124648.1 256423995 8361190 6264154..6265014 1 NC_013132.1 PFAM: pirin; KEGG: bba:Bd0309 pirin-related protein; pirin 6265014 8361190 Cpin_5014 Chitinophaga pinensis DSM 2588 pirin YP_003124648.1 6264154 D 485918 CDS YP_003124649.1 256423996 8361191 6265032..6265964 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll3247 dioxygenase; bleomycin resistance protein 6265964 8361191 Cpin_5015 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003124649.1 6265032 D 485918 CDS YP_003124650.1 256423997 8361192 6265975..6266277 1 NC_013132.1 KEGG: aci:ACIAD3581 hypothetical protein; hypothetical protein 6266277 8361192 Cpin_5016 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124650.1 6265975 D 485918 CDS YP_003124651.1 256423998 8361193 6266295..6266912 1 NC_013132.1 PFAM: phospholipase/carboxylesterase; KEGG: abm:ABSDF1529 carboxylesterase; phospholipase/carboxylesterase 6266912 8361193 Cpin_5017 Chitinophaga pinensis DSM 2588 phospholipase/carboxylesterase YP_003124651.1 6266295 D 485918 CDS YP_003124652.1 256423999 8361194 complement(6267182..6267766) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 6267766 8361194 Cpin_5018 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003124652.1 6267182 R 485918 CDS YP_003124653.1 256424000 8361195 6267885..6270332 1 NC_013132.1 hypothetical protein 6270332 8361195 Cpin_5019 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124653.1 6267885 D 485918 CDS YP_003124654.1 256424001 8361196 6270780..6271952 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_15630 hypothetical protein; major facilitator superfamily protein 6271952 8361196 Cpin_5020 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003124654.1 6270780 D 485918 CDS YP_003124655.1 256424002 8361197 6271955..6272626 1 NC_013132.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: bja:bll2790 sugar transferase; HAD-superfamily hydrolase 6272626 8361197 Cpin_5021 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003124655.1 6271955 D 485918 CDS YP_003124656.1 256424003 8361198 complement(6272813..6273052) 1 NC_013132.1 KEGG: mxa:MXAN_0241 hypothetical protein; hypothetical protein 6273052 8361198 Cpin_5022 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124656.1 6272813 R 485918 CDS YP_003124657.1 256424004 8361199 6273160..6273765 1 NC_013132.1 KEGG: sus:Acid_6666 outer membrane protein; hypothetical protein 6273765 8361199 Cpin_5023 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124657.1 6273160 D 485918 CDS YP_003124658.1 256424005 8361200 6273779..6274171 1 NC_013132.1 KEGG: mes:Meso_0331 hypothetical protein; hypothetical protein 6274171 8361200 Cpin_5024 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124658.1 6273779 D 485918 CDS YP_003124659.1 256424006 8361201 complement(6274173..6274571) 1 NC_013132.1 KEGG: ret:RHE_CH03280 hypothetical protein; hypothetical protein 6274571 8361201 Cpin_5025 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124659.1 6274173 R 485918 CDS YP_003124660.1 256424007 8361202 complement(6274558..6275538) 1 NC_013132.1 PFAM: Luciferase-like monooxygenase; KEGG: mch:Mchl_1435 dehydrogenase protein; luciferase-like monooxygenase 6275538 8361202 Cpin_5026 Chitinophaga pinensis DSM 2588 luciferase-like monooxygenase YP_003124660.1 6274558 R 485918 CDS YP_003124661.1 256424008 8361203 complement(6275581..6275832) 1 NC_013132.1 hypothetical protein 6275832 8361203 Cpin_5027 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124661.1 6275581 R 485918 CDS YP_003124662.1 256424009 8361204 complement(6275874..6276413) 1 NC_013132.1 KEGG: dal:Dalk_1748 4'-phosphopantetheinyl transferase; hypothetical protein 6276413 8361204 Cpin_5028 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124662.1 6275874 R 485918 CDS YP_003124663.1 256424010 8361205 complement(6276410..6276664) 1 NC_013132.1 KEGG: sat:SYN_01693 acyl carrier protein; acyl carrier protein 6276664 8361205 Cpin_5029 Chitinophaga pinensis DSM 2588 acyl carrier protein YP_003124663.1 6276410 R 485918 CDS YP_003124664.1 256424011 8361206 complement(6276670..6277941) 1 NC_013132.1 PFAM: beta-ketoacyl synthase; KEGG: sat:SYN_01694 3-oxoacyl-[acyl-carrier- protein] synthase; beta-ketoacyl synthase 6277941 8361206 Cpin_5030 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003124664.1 6276670 R 485918 CDS YP_003124665.1 256424012 8361207 complement(6277934..6278380) 1 NC_013132.1 PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sat:SYN_01695 3-hydroxymyristoyl/3- hydroxydecanoyl-(acyl carrier protein) dehydratase; 3-hydroxyacyl-ACP dehydratase 6278380 8361207 Cpin_5031 Chitinophaga pinensis DSM 2588 3-hydroxyacyl-ACP dehydratase YP_003124665.1 6277934 R 485918 CDS YP_003124666.1 256424013 8361208 complement(6278384..6279181) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dal:Dalk_1753 oxidoreductase; short-chain dehydrogenase/reductase SDR 6279181 8361208 Cpin_5032 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124666.1 6278384 R 485918 CDS YP_003124667.1 256424014 8361209 complement(6279175..6280227) 1 NC_013132.1 PFAM: chalcone and stilbene synthase domain protein; FAE1/type III polyketide synthase-like protein; 3- Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3- Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: mxa:MXAN_6639 chalcone/stilbene synthase family protein; chalcone synthase 6280227 8361209 Cpin_5033 Chitinophaga pinensis DSM 2588 chalcone synthase YP_003124667.1 6279175 R 485918 CDS YP_003124668.1 256424015 8361210 complement(6280224..6280937) 1 NC_013132.1 PFAM: methyltransferase type 12; KEGG: gbm:Gbem_1026 methyltransferase type 11; type 12 methyltransferase 6280937 8361210 Cpin_5034 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003124668.1 6280224 R 485918 CDS YP_003124669.1 256424016 8361211 complement(6280944..6282068) 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; monooxygenase FAD-binding; tryptophan halogenase; KEGG: scl:sce2184 electron transfer oxidoreductase; FAD dependent oxidoreductase 6282068 8361211 Cpin_5035 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003124669.1 6280944 R 485918 CDS YP_003124670.1 256424017 8361212 6282204..6283121 1 NC_013132.1 PFAM: protein of unknown function UPF0187; KEGG: bba:Bd2002 hypothetical protein; hypothetical protein 6283121 8361212 Cpin_5036 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124670.1 6282204 D 485918 CDS YP_003124671.1 256424018 8361213 complement(6283194..6284126) 1 NC_013132.1 PFAM: manganese containing catalase; KEGG: mfa:Mfla_1436 catalase; catalase 6284126 8361213 Cpin_5037 Chitinophaga pinensis DSM 2588 catalase YP_003124671.1 6283194 R 485918 CDS YP_003124672.1 256424019 8361214 6284369..6284644 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6284644 8361214 Cpin_5038 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124672.1 6284369 D 485918 CDS YP_003124673.1 256424020 8361215 6284745..6286463 1 NC_013132.1 PFAM: carbamoyltransferase; KEGG: reu:Reut_B4385 carbamoyltransferase; carbamoyltransferase 6286463 8361215 Cpin_5039 Chitinophaga pinensis DSM 2588 carbamoyltransferase YP_003124673.1 6284745 D 485918 CDS YP_003124674.1 256424021 8361216 6286474..6287445 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: bac:BamMC406_6397 glycosyl transferase family protein; family 2 glycosyl transferase 6287445 8361216 Cpin_5040 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003124674.1 6286474 D 485918 CDS YP_003124675.1 256424022 8361217 6287448..6288428 1 NC_013132.1 PFAM: glycosyl transferase family 9; KEGG: bmj:BMULJ_06053 ADP-heptose:LPS heptosyltransferase; glycosyl transferase family protein 6288428 8361217 Cpin_5041 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003124675.1 6287448 D 485918 CDS YP_003124676.1 256424023 8361218 complement(6288393..6289511) 1 NC_013132.1 PFAM: glycosyl transferase family 9; KEGG: nmu:Nmul_A1791 glycosyl transferase family protein; glycosyl transferase family protein 6289511 8361218 Cpin_5042 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003124676.1 6288393 R 485918 CDS YP_003124677.1 256424024 8361219 complement(6289512..6290996) 1 NC_013132.1 TIGRFAM: cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: nmu:Nmul_A1792 bifunctional ADP-heptose synthase; cytidyltransferase-related domain-containing protein 6290996 8361219 Cpin_5043 Chitinophaga pinensis DSM 2588 cytidyltransferase-related domain-containing protein YP_003124677.1 6289512 R 485918 CDS YP_003124678.1 256424025 8361220 complement(6290972..6291568) 1 NC_013132.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; HAD- superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; polynucleotide kinase 3 phosphatase central region; KEGG: nmu:Nmul_A1793 HAD family hydrolase; HAD-superfamily hydrolase 6291568 8361220 Cpin_5044 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003124678.1 6290972 R 485918 CDS YP_003124679.1 256424026 8361221 complement(6291565..6292833) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A1795 phosphoheptose isomerase; group 1 glycosyl transferase 6292833 8361221 Cpin_5045 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003124679.1 6291565 R 485918 CDS YP_003124680.1 256424027 8361222 complement(6292848..6293891) 1 NC_013132.1 KEGG: nmu:Nmul_A1782 glycosyltransferase; glycosyltransferase 6293891 8361222 Cpin_5046 Chitinophaga pinensis DSM 2588 glycosyltransferase YP_003124680.1 6292848 R 485918 CDS YP_003124681.1 256424028 8361223 6294353..6295510 1 NC_013132.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: scl:sce0475 alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 6295510 8361223 Cpin_5047 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase GroES domain-containing protein YP_003124681.1 6294353 D 485918 CDS YP_003124682.1 256424029 8361225 6296227..6297768 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: mxa:MXAN_1554 iron-sulfur cluster-binding protein, Rieske family; FAD dependent oxidoreductase 6297768 8361225 Cpin_5049 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003124682.1 6296227 D 485918 CDS YP_003124683.1 256424030 8361226 6297765..6298268 1 NC_013132.1 PFAM: CinA domain protein; KEGG: uncharacterized protein (competence- and mitomycin-induced); CinA domain-containing protein 6298268 8361226 Cpin_5050 Chitinophaga pinensis DSM 2588 CinA domain-containing protein YP_003124683.1 6297765 D 485918 CDS YP_003124684.1 256424031 8361227 6298316..6298540 1 NC_013132.1 hypothetical protein 6298540 8361227 Cpin_5051 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124684.1 6298316 D 485918 CDS YP_003124685.1 256424032 8361228 complement(6298605..6299141) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6299141 8361228 Cpin_5052 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124685.1 6298605 R 485918 CDS YP_003124686.1 256424033 8361229 complement(6299155..6299259) 1 NC_013132.1 hypothetical protein 6299259 8361229 Cpin_5053 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124686.1 6299155 R 485918 CDS YP_003124687.1 256424034 8361230 6299532..6300920 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: pzu:PHZ_c2267 permease of the major facilitator superfamily; major facilitator superfamily protein 6300920 8361230 Cpin_5054 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003124687.1 6299532 D 485918 CDS YP_003124688.1 256424035 8361231 complement(6300960..6301334) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mag:amb3439 response regulator; response regulator receiver protein 6301334 8361231 Cpin_5055 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003124688.1 6300960 R 485918 CDS YP_003124689.1 256424036 8361232 6301764..6302522 1 NC_013132.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: gur:Gura_3107 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 6302522 8361232 Cpin_5056 Chitinophaga pinensis DSM 2588 4'-phosphopantetheinyl transferase YP_003124689.1 6301764 D 485918 CDS YP_003124690.1 256424037 8361233 complement(6302725..6303876) 1 NC_013132.1 KEGG: sus:Acid_1898 hypothetical protein; hypothetical protein 6303876 8361233 Cpin_5057 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124690.1 6302725 R 485918 CDS YP_003124691.1 256424038 8361234 complement(6304189..6304932) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: cps:CPS_1819 LytTr DNA-binding response regulator; LytTR family two component transcriptional regulator 6304932 8361234 Cpin_5058 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003124691.1 6304189 R 485918 CDS YP_003124692.1 256424039 8361235 complement(6304898..6306742) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; hypothetical protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: hypothetical protein; histidine kinase 6306742 8361235 Cpin_5059 Chitinophaga pinensis DSM 2588 histidine kinase YP_003124692.1 6304898 R 485918 CDS YP_003124693.1 256424040 8361236 complement(6306748..6307218) 1 NC_013132.1 hypothetical protein 6307218 8361236 Cpin_5060 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124693.1 6306748 R 485918 CDS YP_003124694.1 256424041 8361237 6307309..6308220 1 NC_013132.1 PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: dde:Dde_1659 heat shock protein DnaJ-like; chaperone DnaJ domain-containing protein 6308220 8361237 Cpin_5061 Chitinophaga pinensis DSM 2588 chaperone DnaJ domain-containing protein YP_003124694.1 6307309 D 485918 CDS YP_003124695.1 256424042 8361238 6308231..6308524 1 NC_013132.1 KEGG: nis:NIS_0956 MerR family transcriptional regulator; hypothetical protein 6308524 8361238 Cpin_5062 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124695.1 6308231 D 485918 CDS YP_003124696.1 256424043 8361239 6308573..6308692 1 NC_013132.1 hypothetical protein 6308692 8361239 Cpin_5063 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124696.1 6308573 D 485918 CDS YP_003124697.1 256424044 8361240 complement(6308873..6310141) 1 NC_013132.1 KEGG: cak:Caul_1425 NHL repeat-containing protein; NHL repeat-containing protein 6310141 8361240 Cpin_5064 Chitinophaga pinensis DSM 2588 NHL repeat-containing protein YP_003124697.1 6308873 R 485918 CDS YP_003124698.1 256424045 8361241 complement(6310269..6310703) 1 NC_013132.1 hypothetical protein 6310703 8361241 Cpin_5065 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124698.1 6310269 R 485918 CDS YP_003124699.1 256424046 8361242 complement(6311230..6311883) 1 NC_013132.1 PFAM: lipolytic protein G-D-S-L family; KEGG: xac:XAC0836 hypothetical protein; G-D-S-L family lipolytic protein 6311883 8361242 Cpin_5066 Chitinophaga pinensis DSM 2588 G-D-S-L family lipolytic protein YP_003124699.1 6311230 R 485918 CDS YP_003124700.1 256424047 8361243 complement(6311911..6312423) 1 NC_013132.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: hch:HCH_00425 alkylated DNA repair protein; 2OG-Fe(II) oxygenase 6312423 8361243 Cpin_5067 Chitinophaga pinensis DSM 2588 2OG-Fe(II) oxygenase YP_003124700.1 6311911 R 485918 CDS YP_003124701.1 256424048 8361244 6312547..6313893 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A2001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 6313893 8361244 Cpin_5068 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003124701.1 6312547 D 485918 CDS YP_003124702.1 256424049 8361245 complement(6313877..6315049) 1 NC_013132.1 KEGG: sfu:Sfum_1534 hypothetical protein; hypothetical protein 6315049 8361245 Cpin_5069 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124702.1 6313877 R 485918 CDS YP_003124703.1 256424050 8361246 complement(6315051..6316664) 1 NC_013132.1 PFAM: glycoside hydrolase family 37; KEGG: cja:CJA_0284 trehalase, , tre37A; alpha,alpha-trehalase 6316664 8361246 Cpin_5070 Chitinophaga pinensis DSM 2588 alpha,alpha-trehalase YP_003124703.1 6315051 R 485918 CDS YP_003124704.1 256424051 8361247 complement(6316699..6316965) 1 NC_013132.1 hypothetical protein 6316965 8361247 Cpin_5071 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124704.1 6316699 R 485918 CDS YP_003124705.1 256424052 8361248 6317091..6318185 1 NC_013132.1 PFAM: HEAT domain containing protein; KEGG: cps:CPS_3967 hypothetical protein; HEAT domain-containing protein 6318185 8361248 Cpin_5072 Chitinophaga pinensis DSM 2588 HEAT domain-containing protein YP_003124705.1 6317091 D 485918 CDS YP_003124706.1 256424053 8361249 6318329..6319102 1 NC_013132.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: pol:Bpro_0083 protein of unknown function DUF899, thioredoxin-like; hypothetical protein 6319102 8361249 Cpin_5073 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124706.1 6318329 D 485918 CDS YP_003124707.1 256424054 8361250 6319114..6319542 1 NC_013132.1 KEGG: sus:Acid_3364 hypothetical protein; hypothetical protein 6319542 8361250 Cpin_5074 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124707.1 6319114 D 485918 CDS YP_003124708.1 256424055 8361251 6319587..6320222 1 NC_013132.1 hypothetical protein 6320222 8361251 Cpin_5075 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124708.1 6319587 D 485918 CDS YP_003124709.1 256424056 8361252 6320230..6321171 1 NC_013132.1 hypothetical protein 6321171 8361252 Cpin_5076 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124709.1 6320230 D 485918 CDS YP_003124710.1 256424057 8361253 6321453..6322253 1 NC_013132.1 hypothetical protein 6322253 8361253 Cpin_5077 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124710.1 6321453 D 485918 CDS YP_003124711.1 256424058 8361254 6322351..6323325 1 NC_013132.1 hypothetical protein 6323325 8361254 Cpin_5078 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124711.1 6322351 D 485918 CDS YP_003124712.1 256424059 8361255 complement(6323396..6325105) 1 NC_013132.1 KEGG: cak:Caul_4606 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 6325105 8361255 Cpin_5079 Chitinophaga pinensis DSM 2588 glucose-methanol-choline oxidoreductase YP_003124712.1 6323396 R 485918 CDS YP_003124713.1 256424060 8361256 complement(6325118..6325669) 1 NC_013132.1 KEGG: smt:Smal_1043 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 6325669 8361256 Cpin_5080 Chitinophaga pinensis DSM 2588 twin-arginine translocation pathway signal YP_003124713.1 6325118 R 485918 CDS YP_003124714.1 256424061 8361257 6325791..6327431 1 NC_013132.1 PFAM: carboxylesterase type B; KEGG: sus:Acid_6531 carboxylesterase, type B; carboxylesterase 6327431 8361257 Cpin_5081 Chitinophaga pinensis DSM 2588 carboxylesterase YP_003124714.1 6325791 D 485918 CDS YP_003124715.1 256424062 8361258 6327659..6327934 1 NC_013132.1 hypothetical protein 6327934 8361258 Cpin_5082 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124715.1 6327659 D 485918 CDS YP_003124716.1 256424063 8361259 complement(6327935..6328813) 1 NC_013132.1 PFAM: NmrA family protein; KEGG: aav:Aave_3935 NmrA family protein; NmrA family protein 6328813 8361259 Cpin_5083 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003124716.1 6327935 R 485918 CDS YP_003124717.1 256424064 8361260 6329036..6329914 1 NC_013132.1 PFAM: Secreted repeat of unknown function; KEGG: sat:SYN_00648 exported lipoprotein; hypothetical protein 6329914 8361260 Cpin_5084 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124717.1 6329036 D 485918 CDS YP_003124718.1 256424065 8361261 6330053..6330925 1 NC_013132.1 KEGG: scl:sce0551 NHL repeat-containing protein; hypothetical protein 6330925 8361261 Cpin_5085 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124718.1 6330053 D 485918 CDS YP_003124719.1 256424066 8361262 complement(6331050..6332423) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppr:PBPRA2340 transport protein; major facilitator superfamily protein 6332423 8361262 Cpin_5086 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003124719.1 6331050 R 485918 CDS YP_003124720.1 256424067 8361263 complement(6332436..6334760) 1 NC_013132.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: nme:NMB0390 maltose phosphorylase; maltose phosphorylase 6334760 8361263 Cpin_5087 Chitinophaga pinensis DSM 2588 maltose phosphorylase YP_003124720.1 6332436 R 485918 CDS YP_003124721.1 256424068 8361264 complement(6334805..6335464) 1 NC_013132.1 TIGRFAM: beta-phosphoglucomutase; beta- phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: pmr:PMI0289 beta-phosphoglucomutase; beta-phosphoglucomutase 6335464 8361264 Cpin_5088 Chitinophaga pinensis DSM 2588 beta-phosphoglucomutase YP_003124721.1 6334805 R 485918 CDS YP_003124722.1 256424069 8361265 complement(6335494..6337353) 1 NC_013132.1 PFAM: alpha amylase catalytic region; Cyclomaltodextrinase; SMART: alpha amylase catalytic sub domain; KEGG: cja:CJA_0735 alpha-amylase, , amy13E; alpha amylase 6337353 8361265 Cpin_5089 Chitinophaga pinensis DSM 2588 alpha amylase YP_003124722.1 6335494 R 485918 CDS YP_003124723.1 256424070 8361266 complement(6337422..6338459) 1 NC_013132.1 KEGG: cja:CJA_0006 alpha-amylase, , amy13G; hypothetical protein 6338459 8361266 Cpin_5090 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124723.1 6337422 R 485918 CDS YP_003124724.1 256424071 8361267 complement(6338502..6340094) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6340094 8361267 Cpin_5091 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124724.1 6338502 R 485918 CDS YP_003124725.1 256424072 8361268 complement(6340114..6343080) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6343080 8361268 Cpin_5092 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124725.1 6340114 R 485918 CDS YP_003124726.1 256424073 8361269 complement(6343505..6344536) 1 NC_013132.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator 6344536 8361269 Cpin_5093 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003124726.1 6343505 R 485918 CDS YP_003124727.1 256424074 8361270 6344867..6356908 1 NC_013132.1 KEGG: predicted protein; TIGRFAM: conserved repeat domain protein; PFAM: coagulation factor 5/8 type domain protein; Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; hypothetical protein 6356908 8361270 Cpin_5094 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124727.1 6344867 D 485918 CDS YP_003124728.1 256424075 8361271 complement(6356998..6357600) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: scl:sce6781 TetR family transcriptional regulator; TetR family transcriptional regulator 6357600 8361271 Cpin_5095 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003124728.1 6356998 R 485918 CDS YP_003124729.1 256424076 8361272 complement(6357742..6358335) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: reh:H16_B0900 transcriptional regulator; TetR family transcriptional regulator 6358335 8361272 Cpin_5096 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003124729.1 6357742 R 485918 CDS YP_003124730.1 256424077 8361273 complement(6358482..6359234) 1 NC_013132.1 hypothetical protein 6359234 8361273 Cpin_5097 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124730.1 6358482 R 485918 CDS YP_003124731.1 256424078 8361274 6359605..6359850 1 NC_013132.1 hypothetical protein 6359850 8361274 Cpin_5098 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124731.1 6359605 D 485918 CDS YP_003124732.1 256424079 8361275 6360251..6360844 1 NC_013132.1 KEGG: bcj:BCAM1414 hypothetical protein; hypothetical protein 6360844 8361275 Cpin_5099 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124732.1 6360251 D 485918 CDS YP_003124733.1 256424080 8361276 6360988..6361842 1 NC_013132.1 PFAM: cytochrome C class I; KEGG: oan:Oant_1675 hypothetical protein; cytochrome C class I 6361842 8361276 Cpin_5100 Chitinophaga pinensis DSM 2588 cytochrome C class I YP_003124733.1 6360988 D 485918 CDS YP_003124734.1 256424081 8361277 complement(6361928..6363325) 1 NC_013132.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: cvi:CV_0130 Xaa-Pro aminopeptidase; peptidase M24 6363325 8361277 Cpin_5101 Chitinophaga pinensis DSM 2588 peptidase M24 YP_003124734.1 6361928 R 485918 CDS YP_003124735.1 256424082 8361278 complement(6363700..6364260) 1 NC_013132.1 KEGG: protozoan/cyanobacterial globin family protein ; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); hypothetical protein 6364260 8361278 Cpin_5102 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124735.1 6363700 R 485918 CDS YP_003124736.1 256424083 8361279 complement(6364281..6364709) 1 NC_013132.1 hypothetical protein 6364709 8361279 Cpin_5103 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124736.1 6364281 R 485918 CDS YP_003124737.1 256424084 8361280 6365109..6365873 1 NC_013132.1 KEGG: nwi:Nwi_0564 hypothetical protein; hypothetical protein 6365873 8361280 Cpin_5104 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124737.1 6365109 D 485918 CDS YP_003124738.1 256424085 8361281 6365937..6366203 1 NC_013132.1 KEGG: neu:NE1680 hypothetical protein; hypothetical protein 6366203 8361281 Cpin_5105 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124738.1 6365937 D 485918 CDS YP_003124739.1 256424086 8361282 6366398..6367018 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bxe:Bxe_A0003 MarR family transcriptional regulator; MarR family transcriptional regulator 6367018 8361282 Cpin_5106 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003124739.1 6366398 D 485918 CDS YP_003124740.1 256424087 8361283 complement(6367025..6368041) 1 NC_013132.1 PFAM: beta-lactamase; KEGG: hch:HCH_03630 beta-lactamase class C and other penicillin binding protein; beta-lactamase 6368041 8361283 Cpin_5107 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003124740.1 6367025 R 485918 CDS YP_003124741.1 256424088 8361284 6368264..6370537 1 NC_013132.1 KEGG: gur:Gura_1730 multi-sensor signal transduction histidine kinase; hypothetical protein 6370537 8361284 Cpin_5108 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124741.1 6368264 D 485918 CDS YP_003124742.1 256424089 8361285 complement(6370913..6372142) 1 NC_013132.1 PFAM: glycoside hydrolase family 16; KEGG: mxa:MXAN_6550 glycosyl hydrolase, family 15; glycoside hydrolase 6372142 8361285 Cpin_5109 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003124742.1 6370913 R 485918 CDS YP_003124743.1 256424090 8361286 6372424..6375324 1 NC_013132.1 PFAM: two component regulator three Y domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: pat:Patl_1836 two component AraC family transcriptional regulator; two component regulator three Y domain-containing protein 6375324 8361286 Cpin_5110 Chitinophaga pinensis DSM 2588 two component regulator three Y domain-containing protein YP_003124743.1 6372424 D 485918 CDS YP_003124744.1 256424091 8361287 6375340..6375984 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: lpc:LPC_1001 RNA polymerase sigma E factor RpoE; ECF subfamily RNA polymerase sigma-24 subunit 6375984 8361287 Cpin_5111 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124744.1 6375340 D 485918 CDS YP_003124745.1 256424092 8361288 6376060..6377277 1 NC_013132.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor; anti-FecI sigma factor FecR 6377277 8361288 Cpin_5112 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124745.1 6376060 D 485918 CDS YP_003124746.1 256424093 8361289 6377512..6380820 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6380820 8361289 Cpin_5113 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124746.1 6377512 D 485918 CDS YP_003124747.1 256424094 8361290 6380832..6382274 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 6382274 8361290 Cpin_5114 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124747.1 6380832 D 485918 CDS YP_003124748.1 256424095 8361291 6382349..6384889 1 NC_013132.1 KEGG: sus:Acid_7167 hypothetical protein; hypothetical protein 6384889 8361291 Cpin_5115 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124748.1 6382349 D 485918 CDS YP_003124749.1 256424096 8361292 6385223..6388402 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 16; two component regulator three Y domain protein; KEGG: xcb:XC_3054 endo-1,3-beta-glucanase precursor; licheninase 6388402 8361292 Cpin_5116 Chitinophaga pinensis DSM 2588 licheninase YP_003124749.1 6385223 D 485918 CDS YP_003124750.1 256424097 8361293 6388702..6392100 1 NC_013132.1 PFAM: carbohydrate-binding protein; Immunoglobulin I-set domain protein; Immunoglobulin domain protein; SMART: cellulose binding type IV; Immunoglobulin subtype; KEGG: hypothetical protein; carbohydrate-binding protein 6392100 8361293 Cpin_5117 Chitinophaga pinensis DSM 2588 carbohydrate-binding protein YP_003124750.1 6388702 D 485918 CDS YP_003124751.1 256424098 8361295 6392520..6393008 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6393008 8361295 Cpin_5118 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124751.1 6392520 D 485918 CDS YP_003124752.1 256424099 8361296 complement(6393217..6393792) 1 NC_013132.1 KEGG: rle:RL0430 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 6393792 8361296 Cpin_5119 Chitinophaga pinensis DSM 2588 peptide deformylase YP_003124752.1 6393217 R 485918 CDS YP_003124753.1 256424100 8361297 6393891..6394718 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator; AraC family transcriptional regulator 6394718 8361297 Cpin_5120 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124753.1 6393891 D 485918 CDS YP_003124754.1 256424101 8361298 complement(6394982..6395782) 1 NC_013132.1 KEGG: mmr:Mmar10_1735 hypothetical protein; hypothetical protein 6395782 8361298 Cpin_5121 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124754.1 6394982 R 485918 CDS YP_003124755.1 256424102 8361299 complement(6396432..6397340) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bcb:BCB4264_A2370 proline iminopeptidase; alpha/beta hydrolase 6397340 8361299 Cpin_5122 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003124755.1 6396432 R 485918 CDS YP_003124756.1 256424103 8361300 complement(6397515..6397712) 1 NC_013132.1 hypothetical protein 6397712 8361300 Cpin_5123 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124756.1 6397515 R 485918 CDS YP_003124757.1 256424104 8361301 complement(6397934..6398803) 1 NC_013132.1 hypothetical protein 6398803 8361301 Cpin_5124 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124757.1 6397934 R 485918 CDS YP_003124758.1 256424105 8361302 complement(6398846..6399403) 1 NC_013132.1 hypothetical protein 6399403 8361302 Cpin_5125 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124758.1 6398846 R 485918 CDS YP_003124759.1 256424106 8361303 complement(6399726..6400682) 1 NC_013132.1 KEGG: pfl:PFL_3332 hypothetical protein; hypothetical protein 6400682 8361303 Cpin_5126 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124759.1 6399726 R 485918 CDS YP_003124760.1 256424107 8361304 complement(6400776..6401795) 1 NC_013132.1 hypothetical protein 6401795 8361304 Cpin_5127 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124760.1 6400776 R 485918 CDS YP_003124761.1 256424108 8361305 6402044..6402709 1 NC_013132.1 KEGG: aav:Aave_3480 hypothetical protein; hypothetical protein 6402709 8361305 Cpin_5128 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124761.1 6402044 D 485918 CDS YP_003124762.1 256424109 8361306 complement(6402905..6403696) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bph:Bphy_6999 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6403696 8361306 Cpin_5129 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124762.1 6402905 R 485918 CDS YP_003124763.1 256424110 8361307 complement(6403817..6404560) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_4477 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6404560 8361307 Cpin_5130 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124763.1 6403817 R 485918 CDS YP_003124764.1 256424111 8361308 6404666..6405043 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bce:BC5059 MarR family transcriptional regulator; HxlR family transcriptional regulator 6405043 8361308 Cpin_5131 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003124764.1 6404666 D 485918 CDS YP_003124765.1 256424112 8361309 6405148..6405393 1 NC_013132.1 hypothetical protein 6405393 8361309 Cpin_5132 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124765.1 6405148 D 485918 CDS YP_003124766.1 256424113 8361310 complement(6405591..6406514) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 6406514 8361310 Cpin_5133 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124766.1 6405591 R 485918 CDS YP_003124767.1 256424114 8361311 6406575..6406778 1 NC_013132.1 hypothetical protein 6406778 8361311 Cpin_5134 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124767.1 6406575 D 485918 CDS YP_003124768.1 256424115 8361312 complement(6406768..6408357) 1 NC_013132.1 PFAM: peptidase M56 BlaR1; KEGG: cak:Caul_3733 peptidase M56 BlaR1; peptidase M56 BlaR1 6408357 8361312 Cpin_5135 Chitinophaga pinensis DSM 2588 peptidase M56 BlaR1 YP_003124768.1 6406768 R 485918 CDS YP_003124769.1 256424116 8361313 complement(6408364..6408720) 1 NC_013132.1 PFAM: Penicillinase repressor; KEGG: aba:Acid345_3296 transcriptional repressor, CopY family; CopY family transcriptional regulator 6408720 8361313 Cpin_5136 Chitinophaga pinensis DSM 2588 CopY family transcriptional regulator YP_003124769.1 6408364 R 485918 CDS YP_003124770.1 256424117 8361314 6409376..6411754 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 6411754 8361314 Cpin_5137 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124770.1 6409376 D 485918 CDS YP_003124771.1 256424118 8361315 complement(6411826..6414195) 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_3917 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 6414195 8361315 Cpin_5138 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003124771.1 6411826 R 485918 CDS YP_003124772.1 256424119 8361316 complement(6414520..6414948) 1 NC_013132.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: rpi:Rpic_3441 ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 6414948 8361316 Cpin_5139 Chitinophaga pinensis DSM 2588 ethyl tert-butyl ether degradation EthD YP_003124772.1 6414520 R 485918 CDS YP_003124773.1 256424120 8361317 6415118..6415666 1 NC_013132.1 hypothetical protein 6415666 8361317 Cpin_5140 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124773.1 6415118 D 485918 CDS YP_003124774.1 256424121 8361318 6415663..6415833 1 NC_013132.1 hypothetical protein 6415833 8361318 Cpin_5141 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124774.1 6415663 D 485918 CDS YP_003124775.1 256424122 8361319 complement(6415916..6418429) 1 NC_013132.1 KEGG: sus:Acid_7167 hypothetical protein; hypothetical protein 6418429 8361319 Cpin_5142 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124775.1 6415916 R 485918 CDS YP_003124776.1 256424123 8361320 complement(6418434..6419288) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 6419288 8361320 Cpin_5143 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003124776.1 6418434 R 485918 CDS YP_003124777.1 256424124 8361321 complement(6419376..6420842) 1 NC_013132.1 hypothetical protein 6420842 8361321 Cpin_5144 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124777.1 6419376 R 485918 CDS YP_003124778.1 256424125 8361322 complement(6420862..6421683) 1 NC_013132.1 hypothetical protein 6421683 8361322 Cpin_5145 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124778.1 6420862 R 485918 CDS YP_003124779.1 256424126 8361323 complement(6421692..6423194) 1 NC_013132.1 hypothetical protein 6423194 8361323 Cpin_5146 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124779.1 6421692 R 485918 CDS YP_003124780.1 256424127 8361324 complement(6423207..6426701) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6426701 8361324 Cpin_5147 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124780.1 6423207 R 485918 CDS YP_003124781.1 256424128 8361325 complement(6426919..6428160) 1 NC_013132.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor; anti-FecI sigma factor FecR 6428160 8361325 Cpin_5148 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124781.1 6426919 R 485918 CDS YP_003124782.1 256424129 8361326 complement(6428214..6428801) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bsu:BSU09520 RNA polymerase sigma factor SigM; ECF subfamily RNA polymerase sigma-24 subunit 6428801 8361326 Cpin_5149 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124782.1 6428214 R 485918 CDS YP_003124783.1 256424130 8361327 6429054..6430754 1 NC_013132.1 PFAM: glycoside hydrolase family 39; KEGG: sus:Acid_3646 glycoside hydrolase family protein; glycoside hydrolase 6430754 8361327 Cpin_5150 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003124783.1 6429054 D 485918 CDS YP_003124784.1 256424131 8361328 complement(6431170..6431682) 1 NC_013132.1 KEGG: lactoylglutathione lyase protein; hypothetical protein 6431682 8361328 Cpin_5151 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124784.1 6431170 R 485918 CDS YP_003124785.1 256424132 8361329 complement(6431797..6432627) 1 NC_013132.1 KEGG: vpa:VPA0062 ribosomal large chain pseudouridine synthase A; hypothetical protein 6432627 8361329 Cpin_5152 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124785.1 6431797 R 485918 CDS YP_003124786.1 256424133 8361330 complement(6432682..6433371) 1 NC_013132.1 KEGG: sml:Smlt1345 hypothetical protein; hypothetical protein 6433371 8361330 Cpin_5153 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124786.1 6432682 R 485918 CDS YP_003124787.1 256424134 8361331 complement(6433352..6434329) 1 NC_013132.1 KEGG: sml:Smlt1346 transmembrane protein; hypothetical protein 6434329 8361331 Cpin_5154 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124787.1 6433352 R 485918 CDS YP_003124788.1 256424135 8361332 6434557..6436428 1 NC_013132.1 KEGG: pha:PSHAa0111 hypothetical protein; hypothetical protein 6436428 8361332 Cpin_5155 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124788.1 6434557 D 485918 CDS YP_003124789.1 256424136 8361333 complement(6436460..6437032) 1 NC_013132.1 PFAM: cupin; KEGG: gdi:GDI2193 hypothetical protein; cupin 6437032 8361333 Cpin_5156 Chitinophaga pinensis DSM 2588 cupin YP_003124789.1 6436460 R 485918 CDS YP_003124790.1 256424137 8361334 complement(6437156..6438190) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: oxidoreductase protein; aldo/keto reductase 6438190 8361334 Cpin_5157 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003124790.1 6437156 R 485918 CDS YP_003124791.1 256424138 8361335 complement(6438279..6439046) 1 NC_013132.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: lch:Lcho_1402 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 6439046 8361335 Cpin_5158 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003124791.1 6438279 R 485918 CDS YP_003124792.1 256424139 8361336 complement(6439084..6441084) 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: cvi:CV_1270 dipeptidyl aminopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 6441084 8361336 Cpin_5159 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003124792.1 6439084 R 485918 CDS YP_003124793.1 256424140 8361337 complement(6441358..6441762) 1 NC_013132.1 hypothetical protein 6441762 8361337 Cpin_5160 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124793.1 6441358 R 485918 CDS YP_003124794.1 256424141 8361338 complement(6441817..6442563) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 6442563 8361338 Cpin_5161 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003124794.1 6441817 R 485918 CDS YP_003124795.1 256424142 8361339 complement(6442567..6443637) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_1132 signal transduction histidine kinase, LytS; signal transduction histidine kinase LytS 6443637 8361339 Cpin_5162 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003124795.1 6442567 R 485918 CDS YP_003124796.1 256424143 8361340 6443845..6444405 1 NC_013132.1 hypothetical protein 6444405 8361340 Cpin_5163 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124796.1 6443845 D 485918 CDS YP_003124797.1 256424144 8361341 6444421..6444849 1 NC_013132.1 PFAM: RDD domain containing protein; KEGG: pst:PSPTO_4317 hypothetical protein; RDD domain-containing protein 6444849 8361341 Cpin_5164 Chitinophaga pinensis DSM 2588 RDD domain-containing protein YP_003124797.1 6444421 D 485918 CDS YP_003124798.1 256424145 8361343 complement(6444974..6445501) 1 NC_013132.1 hypothetical protein 6445501 8361343 Cpin_5166 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124798.1 6444974 R 485918 CDS YP_003124799.1 256424146 8361344 6445752..6447878 1 NC_013132.1 KEGG: pne:Pnec_0316 hypothetical protein; hypothetical protein 6447878 8361344 Cpin_5167 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124799.1 6445752 D 485918 CDS YP_003124800.1 256424147 8361345 complement(6448015..6448458) 1 NC_013132.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bav:BAV2092 cold shock-like protein; cold-shock DNA-binding domain-containing protein 6448458 8361345 Cpin_5168 Chitinophaga pinensis DSM 2588 cold-shock DNA-binding domain-containing protein YP_003124800.1 6448015 R 485918 CDS YP_003124801.1 256424148 8361346 complement(6449008..6449892) 1 NC_013132.1 PFAM: xylose isomerase; KEGG: amc:MADE_00428 twin-arginine translocation pathway signal; xylose isomerase 6449892 8361346 Cpin_5169 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003124801.1 6449008 R 485918 CDS YP_003124802.1 256424149 8361347 6450341..6451090 1 NC_013132.1 KEGG: mmr:Mmar10_0168 hypothetical protein; hypothetical protein 6451090 8361347 Cpin_5170 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124802.1 6450341 D 485918 CDS YP_003124803.1 256424150 8361348 6451345..6451908 1 NC_013132.1 PFAM: PhnA protein; SMART: PhnA protein; KEGG: sde:Sde_0107 PhnA protein; PhnA protein 6451908 8361348 Cpin_5171 Chitinophaga pinensis DSM 2588 PhnA protein YP_003124803.1 6451345 D 485918 CDS YP_003124804.1 256424151 8361349 6452064..6454544 1 NC_013132.1 KEGG: mxa:MXAN_1626 hypothetical protein; hypothetical protein 6454544 8361349 Cpin_5172 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124804.1 6452064 D 485918 CDS YP_003124805.1 256424152 8361350 6454728..6455546 1 NC_013132.1 KEGG: efe:EFER_3469 lyase containing heat- repeat; hypothetical protein 6455546 8361350 Cpin_5173 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124805.1 6454728 D 485918 CDS YP_003124806.1 256424153 8361351 6455604..6456500 1 NC_013132.1 PFAM: Ppx/GppA phosphatase; KEGG: hypothetical protein; Ppx/GppA phosphatase 6456500 8361351 Cpin_5174 Chitinophaga pinensis DSM 2588 Ppx/GppA phosphatase YP_003124806.1 6455604 D 485918 CDS YP_003124807.1 256424154 8361352 complement(6456621..6457280) 1 NC_013132.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mlo:mlr2503 hypothetical protein; bifunctional deaminase-reductase domain-containing protein 6457280 8361352 Cpin_5175 Chitinophaga pinensis DSM 2588 bifunctional deaminase-reductase domain-containing protein YP_003124807.1 6456621 R 485918 CDS YP_003124808.1 256424155 8361353 6457443..6457817 1 NC_013132.1 hypothetical protein 6457817 8361353 Cpin_5176 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124808.1 6457443 D 485918 CDS YP_003124809.1 256424156 8361354 6457889..6458878 1 NC_013132.1 hypothetical protein 6458878 8361354 Cpin_5177 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124809.1 6457889 D 485918 CDS YP_003124810.1 256424157 8361355 6459113..6459535 1 NC_013132.1 hypothetical protein 6459535 8361355 Cpin_5178 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124810.1 6459113 D 485918 CDS YP_003124811.1 256424158 8361356 6459711..6460796 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_0374 secretion protein HlyD; RND family efflux transporter MFP subunit 6460796 8361356 Cpin_5179 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003124811.1 6459711 D 485918 CDS YP_003124812.1 256424159 8361357 6460821..6463988 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 6463988 8361357 Cpin_5180 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003124812.1 6460821 D 485918 CDS YP_003124813.1 256424160 8361358 6463981..6465414 1 NC_013132.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_0372 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 6465414 8361358 Cpin_5181 Chitinophaga pinensis DSM 2588 NodT family RND efflux system outer membrane lipoprotein YP_003124813.1 6463981 D 485918 CDS YP_003124814.1 256424161 8361359 complement(6465514..6465912) 1 NC_013132.1 PFAM: Penicillinase repressor; KEGG: mxa:MXAN_0190 hypothetical protein; CopY family transcriptional regulator 6465912 8361359 Cpin_5182 Chitinophaga pinensis DSM 2588 CopY family transcriptional regulator YP_003124814.1 6465514 R 485918 CDS YP_003124815.1 256424162 8361360 complement(6466031..6466771) 1 NC_013132.1 hypothetical protein 6466771 8361360 Cpin_5183 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124815.1 6466031 R 485918 CDS YP_003124816.1 256424163 8361361 complement(6466784..6467950) 1 NC_013132.1 hypothetical protein 6467950 8361361 Cpin_5184 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124816.1 6466784 R 485918 CDS YP_003124817.1 256424164 8361362 complement(6467974..6468858) 1 NC_013132.1 KEGG: xac:XAC0731 hypothetical protein; hypothetical protein 6468858 8361362 Cpin_5185 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124817.1 6467974 R 485918 CDS YP_003124818.1 256424165 8361363 complement(6468870..6469724) 1 NC_013132.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: bja:blr7814 L-proline 4-hydroxylase; phytanoyl-CoA dioxygenase 6469724 8361363 Cpin_5186 Chitinophaga pinensis DSM 2588 phytanoyl-CoA dioxygenase YP_003124818.1 6468870 R 485918 CDS YP_003124819.1 256424166 8361364 complement(6469740..6470918) 1 NC_013132.1 KEGG: mno:Mnod_3023 polysaccharide deacetylase; cell wall biosynthesis glycosyltransferase 6470918 8361364 Cpin_5187 Chitinophaga pinensis DSM 2588 cell wall biosynthesis glycosyltransferase YP_003124819.1 6469740 R 485918 CDS YP_003124820.1 256424167 8361365 complement(6470930..6488146) 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase; amino acid adenylation protein 6488146 8361365 Cpin_5188 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003124820.1 6470930 R 485918 CDS YP_003124821.1 256424168 8361366 complement(6488181..6506789) 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: pfo:Pfl01_1845 peptide synthase; amino acid adenylation protein 6506789 8361366 Cpin_5189 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003124821.1 6488181 R 485918 CDS YP_003124822.1 256424169 8361367 complement(6506840..6528346) 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase; amino acid adenylation protein 6528346 8361367 Cpin_5190 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003124822.1 6506840 R 485918 CDS YP_003124823.1 256424170 8361368 complement(6528413..6555940) 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: pfo:Pfl01_1845 peptide synthase; amino acid adenylation protein 6555940 8361368 Cpin_5191 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003124823.1 6528413 R 485918 CDS YP_003124824.1 256424171 8361369 complement(6555998..6557623) 1 NC_013132.1 KEGG: rso:RS03728 hypothetical protein; hypothetical protein 6557623 8361369 Cpin_5192 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124824.1 6555998 R 485918 CDS YP_003124825.1 256424172 8361370 complement(6557613..6558341) 1 NC_013132.1 PFAM: thioesterase; KEGG: bcz:BCZK1713 thioesterase; thioesterase 6558341 8361370 Cpin_5193 Chitinophaga pinensis DSM 2588 thioesterase YP_003124825.1 6557613 R 485918 CDS YP_003124826.1 256424173 8361371 complement(6558352..6560001) 1 NC_013132.1 PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: hch:HCH_02804 ABC-type siderophore export system, fused ATPase and permease components; ABC transporter 6560001 8361371 Cpin_5194 Chitinophaga pinensis DSM 2588 ABC transporter YP_003124826.1 6558352 R 485918 CDS YP_003124827.1 256424174 8361372 complement(6560003..6568264) 1 NC_013132.1 TIGRFAM: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: bcb:BCB4264_A2463 bacitracin synthetase 1; amino acid adenylation protein 6568264 8361372 Cpin_5195 Chitinophaga pinensis DSM 2588 amino acid adenylation protein YP_003124827.1 6560003 R 485918 CDS YP_003124828.1 256424175 8361373 complement(6568497..6569201) 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: hch:HCH_00419 response regulator; LuxR family transcriptional regulator 6569201 8361373 Cpin_5196 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003124828.1 6568497 R 485918 CDS YP_003124829.1 256424176 8361374 6569456..6569572 1 NC_013132.1 hypothetical protein 6569572 8361374 Cpin_5197 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124829.1 6569456 D 485918 CDS YP_003124830.1 256424177 8361375 6569729..6570241 1 NC_013132.1 PFAM: NGN domain protein; KEGG: dal:Dalk_0423 NusG antitermination factor; NusG antitermination factor 6570241 8361375 Cpin_5198 Chitinophaga pinensis DSM 2588 NusG antitermination factor YP_003124830.1 6569729 D 485918 CDS YP_003124831.1 256424178 8361376 6570352..6571785 1 NC_013132.1 PFAM: peptidase M56 BlaR1; peptidase M48 Ste24p; KEGG: sus:Acid_0899 peptidase M56, BlaR1; peptidase M56 BlaR1 6571785 8361376 Cpin_5199 Chitinophaga pinensis DSM 2588 peptidase M56 BlaR1 YP_003124831.1 6570352 D 485918 CDS YP_003124832.1 256424179 8361377 6571890..6574346 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor; TonB-dependent receptor plug 6574346 8361377 Cpin_5200 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124832.1 6571890 D 485918 CDS YP_003124833.1 256424180 8361378 complement(6574421..6575146) 1 NC_013132.1 KEGG: bcr:BCAH187_A4960 hypothetical protein; hypothetical protein 6575146 8361378 Cpin_5201 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124833.1 6574421 R 485918 CDS YP_003124834.1 256424181 8361379 complement(6575270..6577033) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6577033 8361379 Cpin_5202 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124834.1 6575270 R 485918 CDS YP_003124835.1 256424182 8361380 complement(6577045..6580059) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 6580059 8361380 Cpin_5203 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003124835.1 6577045 R 485918 CDS YP_003124836.1 256424183 8361381 complement(6580152..6580280) 1 NC_013132.1 hypothetical protein 6580280 8361381 Cpin_5204 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124836.1 6580152 R 485918 CDS YP_003124837.1 256424184 8361382 complement(6580398..6580805) 1 NC_013132.1 hypothetical protein 6580805 8361382 Cpin_5205 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124837.1 6580398 R 485918 CDS YP_003124838.1 256424185 8361383 complement(6580950..6581432) 1 NC_013132.1 hypothetical protein 6581432 8361383 Cpin_5206 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124838.1 6580950 R 485918 CDS YP_003124839.1 256424186 8361384 complement(6581527..6582048) 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: afw:Anae109_3662 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 6582048 8361384 Cpin_5207 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003124839.1 6581527 R 485918 CDS YP_003124840.1 256424187 8361385 6582202..6583176 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pat:Patl_2142 AraC family transcriptional regulator; AraC family transcriptional regulator 6583176 8361385 Cpin_5208 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124840.1 6582202 D 485918 CDS YP_003124841.1 256424188 8361386 complement(6583190..6583825) 1 NC_013132.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: vvu:VV2_1643 alkylated DNA repair protein; 2OG-Fe(II) oxygenase 6583825 8361386 Cpin_5209 Chitinophaga pinensis DSM 2588 2OG-Fe(II) oxygenase YP_003124841.1 6583190 R 485918 CDS YP_003124842.1 256424189 8361387 complement(6583984..6584523) 1 NC_013132.1 KEGG: sus:Acid_6666 outer membrane protein; hypothetical protein 6584523 8361387 Cpin_5210 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124842.1 6583984 R 485918 CDS YP_003124843.1 256424190 8361388 complement(6584638..6585408) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nar:Saro_3776 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6585408 8361388 Cpin_5211 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003124843.1 6584638 R 485918 CDS YP_003124844.1 256424191 8361389 complement(6585423..6587606) 1 NC_013132.1 hypothetical protein 6587606 8361389 Cpin_5212 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124844.1 6585423 R 485918 CDS YP_003124845.1 256424192 8361390 complement(6587759..6588823) 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: similar to sorbitol dehydrogenase; K00008 L- iditol 2-dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 6588823 8361390 Cpin_5213 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003124845.1 6587759 R 485918 CDS YP_003124846.1 256424193 8361391 complement(6588942..6589280) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: ppr:PBPRB1657 transcriptional regulator; HxlR family transcriptional regulator 6589280 8361391 Cpin_5214 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003124846.1 6588942 R 485918 CDS YP_003124847.1 256424194 8361392 6589344..6590354 1 NC_013132.1 KEGG: bha:BH2855 hypothetical protein; hypothetical protein 6590354 8361392 Cpin_5215 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124847.1 6589344 D 485918 CDS YP_003124848.1 256424195 8361393 6590472..6591596 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: acyltransferase family protein; acyltransferase 3 6591596 8361393 Cpin_5216 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003124848.1 6590472 D 485918 CDS YP_003124849.1 256424196 8361394 6591626..6593230 1 NC_013132.1 PFAM: alpha-L-arabinofuranosidase; KEGG: sus:Acid_3644 alpha-N-arabinofuranosidase; alpha-N-arabinofuranosidase 6593230 8361394 Cpin_5217 Chitinophaga pinensis DSM 2588 alpha-N-arabinofuranosidase YP_003124849.1 6591626 D 485918 CDS YP_003124850.1 256424197 8361395 complement(6593437..6594381) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bxe:Bxe_B0550 alpha/beta family hydrolase; alpha/beta hydrolase 6594381 8361395 Cpin_5218 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003124850.1 6593437 R 485918 CDS YP_003124851.1 256424198 8361396 6594622..6595764 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: plu:plu1526 hypothetical protein; NADH:flavin oxidoreductase 6595764 8361396 Cpin_5219 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003124851.1 6594622 D 485918 CDS YP_003124852.1 256424199 8361397 6595885..6596517 1 NC_013132.1 hypothetical protein 6596517 8361397 Cpin_5220 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124852.1 6595885 D 485918 CDS YP_003124853.1 256424200 8361398 6596557..6597741 1 NC_013132.1 KEGG: mrd:Mrad2831_6398 hypothetical protein; hypothetical protein 6597741 8361398 Cpin_5221 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124853.1 6596557 D 485918 CDS YP_003124854.1 256424201 8361399 6597866..6599026 1 NC_013132.1 KEGG: sil:SPO0571 PKD domain-containing protein; hypothetical protein 6599026 8361399 Cpin_5222 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124854.1 6597866 D 485918 CDS YP_003124855.1 256424202 8361400 6599071..6602757 1 NC_013132.1 KEGG: similar to C6orf205 protein; hypothetical protein 6602757 8361400 Cpin_5223 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124855.1 6599071 D 485918 CDS YP_003124856.1 256424203 8361401 6602769..6603851 1 NC_013132.1 hypothetical protein 6603851 8361401 Cpin_5224 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124856.1 6602769 D 485918 CDS YP_003124857.1 256424204 8361402 complement(6604624..6605700) 1 NC_013132.1 PFAM: peptidase M48 Ste24p; KEGG: peptidase M48 Ste24p; peptidase M48 Ste24p 6605700 8361402 Cpin_5225 Chitinophaga pinensis DSM 2588 peptidase M48 Ste24p YP_003124857.1 6604624 R 485918 CDS YP_003124858.1 256424205 8361403 complement(6605709..6606674) 1 NC_013132.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: azo:azo3559 hypothetical protein; hypothetical protein 6606674 8361403 Cpin_5226 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124858.1 6605709 R 485918 CDS YP_003124859.1 256424206 8361404 6606824..6607525 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: efe:EFER_2276 hydrolase or acyltransferase; alpha/beta hydrolase 6607525 8361404 Cpin_5227 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003124859.1 6606824 D 485918 CDS YP_003124860.1 256424207 8361405 complement(6607542..6608651) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: bra:BRADO2137 phosphatase; metallophosphoesterase 6608651 8361405 Cpin_5228 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003124860.1 6607542 R 485918 CDS YP_003124861.1 256424208 8361406 complement(6608772..6609179) 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: vsp:VS_1604 hypothetical protein; NUDIX hydrolase 6609179 8361406 Cpin_5229 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003124861.1 6608772 R 485918 CDS YP_003124862.1 256424209 8361407 complement(6609203..6609937) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 6609937 8361407 Cpin_5230 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003124862.1 6609203 R 485918 CDS YP_003124863.1 256424210 8361408 complement(6609934..6611490) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_7002 histidine kinase internal region; signal transduction histidine kinase LytS 6611490 8361408 Cpin_5231 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003124863.1 6609934 R 485918 CDS YP_003124864.1 256424211 8361409 6611624..6612526 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_1686 ABC transporter, ATP-binding protein; ABC transporter 6612526 8361409 Cpin_5232 Chitinophaga pinensis DSM 2588 ABC transporter YP_003124864.1 6611624 D 485918 CDS YP_003124865.1 256424212 8361410 6612520..6616008 1 NC_013132.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: rce:RC1_1687 hypothetical protein; peptidase M1 membrane alanine aminopeptidase 6616008 8361410 Cpin_5233 Chitinophaga pinensis DSM 2588 peptidase M1 membrane alanine aminopeptidase YP_003124865.1 6612520 D 485918 CDS YP_003124866.1 256424213 8361411 complement(6616036..6618693) 1 NC_013132.1 TIGRFAM: conserved repeat domain protein; KEGG: pfl:PFL_3520 outer membrane autotransporter; hypothetical protein 6618693 8361411 Cpin_5234 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124866.1 6616036 R 485918 CDS YP_003124867.1 256424214 8361412 6618775..6619191 1 NC_013132.1 hypothetical protein 6619191 8361412 Cpin_5235 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124867.1 6618775 D 485918 CDS YP_003124868.1 256424215 8361413 complement(6619230..6620789) 1 NC_013132.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: hypothetical protein; microcystin LR degradation protein MlrC 6620789 8361413 Cpin_5236 Chitinophaga pinensis DSM 2588 microcystin LR degradation protein MlrC YP_003124868.1 6619230 R 485918 CDS YP_003124869.1 256424216 8361414 complement(6620986..6622365) 1 NC_013132.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gbm:Gbem_2559 AAA ATPase central domain protein; ATPase AAA 6622365 8361414 Cpin_5237 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003124869.1 6620986 R 485918 CDS YP_003124870.1 256424217 8361415 complement(6622411..6623922) 1 NC_013132.1 KEGG: sde:Sde_1050 hypothetical protein; hypothetical protein 6623922 8361415 Cpin_5238 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124870.1 6622411 R 485918 CDS YP_003124871.1 256424218 8361416 complement(6623950..6624729) 1 NC_013132.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: lip:LIA029 chromosome-partitioning ATPase; cobyrinic acid ac-diamide synthase 6624729 8361416 Cpin_5239 Chitinophaga pinensis DSM 2588 cobyrinic acid ac-diamide synthase YP_003124871.1 6623950 R 485918 CDS YP_003124872.1 256424219 8361417 complement(6624759..6625874) 1 NC_013132.1 KEGG: hypothetical protein; beta-1 3-glucan synthesis protein 6625874 8361417 Cpin_5240 Chitinophaga pinensis DSM 2588 beta-1 3-glucan synthesis protein YP_003124872.1 6624759 R 485918 CDS YP_003124873.1 256424220 8361418 complement(6625884..6629843) 1 NC_013132.1 KEGG: gbm:Gbem_2557 hypothetical protein; hypothetical protein 6629843 8361418 Cpin_5241 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124873.1 6625884 R 485918 CDS YP_003124874.1 256424221 8361419 complement(6629912..6631702) 1 NC_013132.1 KEGG: gbm:Gbem_2556 hypothetical protein; hypothetical protein 6631702 8361419 Cpin_5242 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124874.1 6629912 R 485918 CDS YP_003124875.1 256424222 8361420 complement(6631702..6634947) 1 NC_013132.1 KEGG: gbm:Gbem_2555 hypothetical protein; hypothetical protein 6634947 8361420 Cpin_5243 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124875.1 6631702 R 485918 CDS YP_003124876.1 256424223 8361421 complement(6634975..6635502) 1 NC_013132.1 KEGG: dar:Daro_3605 hypothetical protein; hypothetical protein 6635502 8361421 Cpin_5244 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124876.1 6634975 R 485918 CDS YP_003124877.1 256424224 8361422 complement(6635546..6642160) 1 NC_013132.1 KEGG: sde:Sde_1046 response regulator receiver/GGDEF/PAS/PAC domain-containing protein; hypothetical protein 6642160 8361422 Cpin_5245 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124877.1 6635546 R 485918 CDS YP_003124878.1 256424225 8361423 complement(6642204..6643892) 1 NC_013132.1 PFAM: carbohydrate-binding protein; KEGG: bba:Bd0705 cell wall surface anchor family protein; carbohydrate-binding protein 6643892 8361423 Cpin_5246 Chitinophaga pinensis DSM 2588 carbohydrate-binding protein YP_003124878.1 6642204 R 485918 CDS YP_003124879.1 256424226 8361424 complement(6643923..6647921) 1 NC_013132.1 KEGG: gbm:Gbem_2553 hypothetical protein; hypothetical protein 6647921 8361424 Cpin_5247 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124879.1 6643923 R 485918 CDS YP_003124880.1 256424227 8361425 complement(6647921..6648379) 1 NC_013132.1 PFAM: GPW/gp25 family protein; KEGG: cja:CJA_3677 gpW / GP25 family protein; GPW/gp25 family protein 6648379 8361425 Cpin_5248 Chitinophaga pinensis DSM 2588 GPW/gp25 family protein YP_003124880.1 6647921 R 485918 CDS YP_003124881.1 256424228 8361426 complement(6648405..6648695) 1 NC_013132.1 PFAM: PAAR repeat-containing protein; KEGG: cja:CJA_3676 PaaR motif family; PAAR repeat-containing protein 6648695 8361426 Cpin_5249 Chitinophaga pinensis DSM 2588 PAAR repeat-containing protein YP_003124881.1 6648405 R 485918 CDS YP_003124882.1 256424229 8361427 complement(6648706..6650496) 1 NC_013132.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: gbm:Gbem_2550 rhs element Vgr protein; Rhs element Vgr protein 6650496 8361427 Cpin_5250 Chitinophaga pinensis DSM 2588 Rhs element Vgr protein YP_003124882.1 6648706 R 485918 CDS YP_003124883.1 256424230 8361428 complement(6650499..6651206) 1 NC_013132.1 KEGG: gbm:Gbem_2549 hypothetical protein; hypothetical protein 6651206 8361428 Cpin_5251 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124883.1 6650499 R 485918 CDS YP_003124884.1 256424231 8361429 complement(6651206..6651376) 1 NC_013132.1 KEGG: gbm:Gbem_2548 hypothetical protein; hypothetical protein 6651376 8361429 Cpin_5252 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124884.1 6651206 R 485918 CDS YP_003124885.1 256424232 8361430 complement(6651398..6651862) 1 NC_013132.1 TIGRFAM: conserved hypothetical protein; KEGG: gbm:Gbem_2547 conserved hypothetical phage tail protein; hypothetical protein 6651862 8361430 Cpin_5253 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124885.1 6651398 R 485918 CDS YP_003124886.1 256424233 8361431 complement(6651865..6652308) 1 NC_013132.1 TIGRFAM: conserved hypothetical protein; KEGG: dar:Daro_3613 phage tail region protein; hypothetical protein 6652308 8361431 Cpin_5254 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124886.1 6651865 R 485918 CDS YP_003124887.1 256424234 8361432 complement(6652352..6653197) 1 NC_013132.1 KEGG: hpp:HPP12_0534 cag pathogenicity island protein Y VirB10-like protein; hypothetical protein 6653197 8361432 Cpin_5255 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124887.1 6652352 R 485918 CDS YP_003124888.1 256424235 8361433 complement(6653240..6654178) 1 NC_013132.1 KEGG: vfi:VF_1138 methyl-accepting chemotaxis protein, TcpI-related; hypothetical protein 6654178 8361433 Cpin_5256 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124888.1 6653240 R 485918 CDS YP_003124889.1 256424236 8361434 complement(6654308..6655705) 1 NC_013132.1 PFAM: tail sheath protein; KEGG: gbm:Gbem_2545 hypothetical protein; tail sheath protein 6655705 8361434 Cpin_5257 Chitinophaga pinensis DSM 2588 tail sheath protein YP_003124889.1 6654308 R 485918 CDS YP_003124890.1 256424237 8361435 complement(6655717..6656940) 1 NC_013132.1 hypothetical protein 6656940 8361435 Cpin_5258 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124890.1 6655717 R 485918 CDS YP_003124891.1 256424238 8361436 complement(6656944..6657558) 1 NC_013132.1 KEGG: gbm:Gbem_2544 hypothetical protein; hypothetical protein 6657558 8361436 Cpin_5259 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124891.1 6656944 R 485918 CDS YP_003124892.1 256424239 8361437 complement(6658435..6660264) 1 NC_013132.1 PFAM: glycoside hydrolase, family 20, catalytic core; beta-N-acetylhexosaminidase-like; KEGG: sde:Sde_3037 glycosyl hydrolase; beta-N-acetylhexosaminidase 6660264 8361437 Cpin_5260 Chitinophaga pinensis DSM 2588 beta-N-acetylhexosaminidase YP_003124892.1 6658435 R 485918 CDS YP_003124893.1 256424240 8361438 6660586..6662658 1 NC_013132.1 hypothetical protein 6662658 8361438 Cpin_5261 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124893.1 6660586 D 485918 CDS YP_003124894.1 256424241 8361439 6662658..6666956 1 NC_013132.1 KEGG: scl:sce3386 protein kinase; hypothetical protein 6666956 8361439 Cpin_5262 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124894.1 6662658 D 485918 CDS YP_003124895.1 256424242 8361440 complement(6667007..6667987) 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: ppu:PP_1952 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 6667987 8361440 Cpin_5263 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003124895.1 6667007 R 485918 CDS YP_003124896.1 256424243 8361441 6668107..6668499 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: dvl:Dvul_0808 HxlR family transcriptional regulator; HxlR family transcriptional regulator 6668499 8361441 Cpin_5264 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003124896.1 6668107 D 485918 CDS YP_003124897.1 256424244 8361442 complement(6668553..6669095) 1 NC_013132.1 hypothetical protein 6669095 8361442 Cpin_5265 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124897.1 6668553 R 485918 CDS YP_003124898.1 256424245 8361443 complement(6669257..6669529) 1 NC_013132.1 KEGG: bph:Bphy_6890 hypothetical protein; hypothetical protein 6669529 8361443 Cpin_5266 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124898.1 6669257 R 485918 CDS YP_003124899.1 256424246 8361444 complement(6670052..6671755) 1 NC_013132.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: gme:Gmet_3362 peptidase S1C, Do; PDZ/DHR/GLGF domain-containing protein 6671755 8361444 Cpin_5267 Chitinophaga pinensis DSM 2588 PDZ/DHR/GLGF domain-containing protein YP_003124899.1 6670052 R 485918 CDS YP_003124900.1 256424247 8361445 6671924..6673396 1 NC_013132.1 KEGG: bhe:BH15200 hypothetical protein; hypothetical protein 6673396 8361445 Cpin_5268 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124900.1 6671924 D 485918 CDS YP_003124901.1 256424248 8361446 6673414..6674889 1 NC_013132.1 hypothetical protein 6674889 8361446 Cpin_5269 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124901.1 6673414 D 485918 CDS YP_003124902.1 256424249 8361447 complement(6674958..6675530) 1 NC_013132.1 PFAM: protein of unknown function DUF417; KEGG: mxa:MXAN_5244 hypothetical protein; hypothetical protein 6675530 8361447 Cpin_5270 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124902.1 6674958 R 485918 CDS YP_003124903.1 256424250 8361448 complement(6675671..6676525) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family; AraC family transcriptional regulator 6676525 8361448 Cpin_5271 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124903.1 6675671 R 485918 CDS YP_003124904.1 256424251 8361449 complement(6676695..6678536) 1 NC_013132.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein; OmpA/MotB domain-containing protein 6678536 8361449 Cpin_5272 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003124904.1 6676695 R 485918 CDS YP_003124905.1 256424252 8361450 complement(6678556..6679524) 1 NC_013132.1 hypothetical protein 6679524 8361450 Cpin_5273 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124905.1 6678556 R 485918 CDS YP_003124906.1 256424253 8361451 complement(6679549..6686682) 1 NC_013132.1 TIGRFAM: outer membrane adhesin like protein; KEGG: cja:CJA_1396 hemolysin; outer membrane adhesin-like protein 6686682 8361451 Cpin_5274 Chitinophaga pinensis DSM 2588 outer membrane adhesin-like protein YP_003124906.1 6679549 R 485918 CDS YP_003124907.1 256424254 8361452 complement(6686933..6688423) 1 NC_013132.1 KEGG: sml:Smlt2170 calcineurin phosphoesterase; hypothetical protein 6688423 8361452 Cpin_5275 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124907.1 6686933 R 485918 CDS YP_003124908.1 256424255 8361453 complement(6688439..6689953) 1 NC_013132.1 hypothetical protein 6689953 8361453 Cpin_5276 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124908.1 6688439 R 485918 CDS YP_003124909.1 256424256 8361454 complement(6689980..6691482) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6691482 8361454 Cpin_5277 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124909.1 6689980 R 485918 CDS YP_003124910.1 256424257 8361455 complement(6691494..6694985) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6694985 8361455 Cpin_5278 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124910.1 6691494 R 485918 CDS YP_003124911.1 256424258 8361456 complement(6695041..6696039) 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN1038 FecR-like transmembrane sensor; anti-FecI sigma factor FecR 6696039 8361456 Cpin_5279 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124911.1 6695041 R 485918 CDS YP_003124912.1 256424259 8361457 complement(6696121..6696663) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: ppf:Pput_3545 anti-FecI sigma factor, FecR; ECF subfamily RNA polymerase sigma-24 subunit 6696663 8361457 Cpin_5280 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124912.1 6696121 R 485918 CDS YP_003124913.1 256424260 8361458 complement(6697044..6698066) 1 NC_013132.1 PFAM: hypothetical protein; KEGG: bba:Bd3413 ABC transporter substrate binding protein; hypothetical protein 6698066 8361458 Cpin_5281 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124913.1 6697044 R 485918 CDS YP_003124914.1 256424261 8361459 complement(6698070..6698816) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component; ABC transporter 6698816 8361459 Cpin_5282 Chitinophaga pinensis DSM 2588 ABC transporter YP_003124914.1 6698070 R 485918 CDS YP_003124915.1 256424262 8361460 complement(6698845..6699639) 1 NC_013132.1 PFAM: protein of unknown function DUF140; KEGG: rpr:RP096 hypothetical protein; hypothetical protein 6699639 8361460 Cpin_5283 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124915.1 6698845 R 485918 CDS YP_003124916.1 256424263 8361461 complement(6699945..6700313) 1 NC_013132.1 hypothetical protein 6700313 8361461 Cpin_5284 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124916.1 6699945 R 485918 CDS YP_003124917.1 256424264 8361462 complement(6700355..6701455) 1 NC_013132.1 PFAM: FAD linked oxidase domain protein; KEGG: hypothetical protein; FAD linked oxidase domain-containing protein 6701455 8361462 Cpin_5285 Chitinophaga pinensis DSM 2588 FAD linked oxidase domain-containing protein YP_003124917.1 6700355 R 485918 CDS YP_003124918.1 256424265 8361463 complement(6701482..6701811) 1 NC_013132.1 KEGG: vsp:VS_II0042 Bor protein precursor of bacteriophage; hypothetical protein 6701811 8361463 Cpin_5286 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124918.1 6701482 R 485918 CDS YP_003124919.1 256424266 8361464 6702003..6702269 1 NC_013132.1 hypothetical protein 6702269 8361464 Cpin_5287 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124919.1 6702003 D 485918 CDS YP_003124920.1 256424267 8361465 complement(6702360..6703187) 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: vha:VIBHAR_01744 hypothetical protein; type 11 methyltransferase 6703187 8361465 Cpin_5288 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003124920.1 6702360 R 485918 CDS YP_003124921.1 256424268 8361466 complement(6703246..6708981) 1 NC_013132.1 PFAM: KR domain protein; beta-ketoacyl synthase; thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: pfl:PFL_2994 nonribosomal peptide synthase; peptide synthase 6708981 8361466 Cpin_5289 Chitinophaga pinensis DSM 2588 peptide synthase YP_003124921.1 6703246 R 485918 CDS YP_003124922.1 256424269 8361467 complement(6708988..6722277) 1 NC_013132.1 PFAM: beta-ketoacyl synthase; methyltransferase type 11; KR domain protein; methyltransferase type 12; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17200 polyketide synthase; erythronolide synthase 6722277 8361467 Cpin_5290 Chitinophaga pinensis DSM 2588 erythronolide synthase YP_003124922.1 6708988 R 485918 CDS YP_003124923.1 256424270 8361468 complement(6722326..6736092) 1 NC_013132.1 PFAM: KR domain protein; beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: gur:Gura_3097 beta-ketoacyl synthase; erythronolide synthase 6736092 8361468 Cpin_5291 Chitinophaga pinensis DSM 2588 erythronolide synthase YP_003124923.1 6722326 R 485918 CDS YP_003124924.1 256424271 8361469 complement(6736094..6741184) 1 NC_013132.1 PFAM: beta-ketoacyl synthase; KR domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17190 polyketide synthase of type I; 3-ketoacyl ACP synthase 6741184 8361469 Cpin_5292 Chitinophaga pinensis DSM 2588 3-ketoacyl ACP synthase YP_003124924.1 6736094 R 485918 CDS YP_003124925.1 256424272 8361470 complement(6741196..6741945) 1 NC_013132.1 involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase 6741945 8361470 Cpin_5293 Chitinophaga pinensis DSM 2588 polyketide biosynthesis enoyl-CoA hydratase YP_003124925.1 6741196 R 485918 CDS YP_003124926.1 256424273 8361471 complement(6741952..6742734) 1 NC_013132.1 involved in polyketide synthesis; polyketide biosynthesis enoyl-CoA hydratase 6742734 8361471 Cpin_5294 Chitinophaga pinensis DSM 2588 polyketide biosynthesis enoyl-CoA hydratase YP_003124926.1 6741952 R 485918 CDS YP_003124927.1 256424274 8361472 complement(6742731..6743984) 1 NC_013132.1 PFAM: hydroxymethylglutaryl-coenzyme A synthase domain protein; hydroxymethylglutaryl-coenzyme A synthase domain; KEGG: bsu:BSU17150 involved in polyketide synthesis; hydroxymethylglutaryl-CoA synthase 6743984 8361472 Cpin_5295 Chitinophaga pinensis DSM 2588 hydroxymethylglutaryl-CoA synthase YP_003124927.1 6742731 R 485918 CDS YP_003124928.1 256424275 8361473 complement(6744019..6761427) 1 NC_013132.1 PFAM: beta-ketoacyl synthase; methyltransferase type 11; methyltransferase type 12; alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; KR domain protein; alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3932 polyketide synthase; beta-ketoacyl synthase 6761427 8361473 Cpin_5296 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003124928.1 6744019 R 485918 CDS YP_003124929.1 256424276 8361474 complement(6761446..6769629) 1 NC_013132.1 PFAM: KR domain protein; AMP-dependent synthetase and ligase; beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: bsu:BSU17190 polyketide synthase of type I; beta-ketoacyl synthase 6769629 8361474 Cpin_5297 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003124929.1 6761446 R 485918 CDS YP_003124930.1 256424277 8361475 complement(6769638..6770309) 1 NC_013132.1 PFAM: protein of unknown function DUF98; KEGG: hch:HCH_06163 4-hydroxybenzoate synthetase (chorismate lyase); hypothetical protein 6770309 8361475 Cpin_5298 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124930.1 6769638 R 485918 CDS YP_003124931.1 256424278 8361476 complement(6770347..6770958) 1 NC_013132.1 hypothetical protein 6770958 8361476 Cpin_5299 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124931.1 6770347 R 485918 CDS YP_003124932.1 256424279 8361477 complement(6770983..6772245) 1 NC_013132.1 PFAM: cytochrome P450; KEGG: bca:BCE_2696 cytochrome P450; cytochrome P450 6772245 8361477 Cpin_5300 Chitinophaga pinensis DSM 2588 cytochrome P450 YP_003124932.1 6770983 R 485918 CDS YP_003124933.1 256424280 8361478 complement(6772314..6773543) 1 NC_013132.1 involved in polyketide production; polyketide beta-ketoacyl:acyl carrier protein synthase 6773543 8361478 Cpin_5301 Chitinophaga pinensis DSM 2588 polyketide beta-ketoacyl:acyl carrier protein synthase YP_003124933.1 6772314 R 485918 CDS YP_003124934.1 256424281 8361479 complement(6773524..6773769) 1 NC_013132.1 KEGG: bmn:BMA10247_A1115 acyl carrier protein; acyl carrier protein 6773769 8361479 Cpin_5302 Chitinophaga pinensis DSM 2588 acyl carrier protein YP_003124934.1 6773524 R 485918 CDS YP_003124935.1 256424282 8361480 complement(6773802..6774077) 1 NC_013132.1 hypothetical protein 6774077 8361480 Cpin_5303 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124935.1 6773802 R 485918 CDS YP_003124936.1 256424283 8361481 complement(6774081..6775082) 1 NC_013132.1 PFAM: acyl transferase; KEGG: gur:Gura_3106 acyl transferase domain- containing protein; acyl transferase 6775082 8361481 Cpin_5304 Chitinophaga pinensis DSM 2588 acyl transferase YP_003124936.1 6774081 R 485918 CDS YP_003124937.1 256424284 8361482 complement(6775103..6777475) 1 NC_013132.1 TIGRFAM: PfaD family protein; malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: gur:Gura_3105 malonyl CoA-acyl carrier protein transacylase; PfaD family protein 6777475 8361482 Cpin_5305 Chitinophaga pinensis DSM 2588 PfaD family protein YP_003124937.1 6775103 R 485918 CDS YP_003124938.1 256424285 8361483 complement(6777510..6778034) 1 NC_013132.1 PFAM: NGN domain protein; SMART: NGN domain protein; KEGG: aba:Acid345_3498 transcription antitermination protein NusG; NusG antitermination factor 6778034 8361483 Cpin_5306 Chitinophaga pinensis DSM 2588 NusG antitermination factor YP_003124938.1 6777510 R 485918 CDS YP_003124939.1 256424286 8361484 6778452..6779726 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: bja:bll0718 transporter; major facilitator superfamily protein 6779726 8361484 Cpin_5307 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003124939.1 6778452 D 485918 CDS YP_003124940.1 256424287 8361485 complement(6779878..6780183) 1 NC_013132.1 hypothetical protein 6780183 8361485 Cpin_5308 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124940.1 6779878 R 485918 CDS YP_003124941.1 256424288 8361486 6780457..6781917 1 NC_013132.1 KEGG: xcb:XC_0515 hypothetical protein; hypothetical protein 6781917 8361486 Cpin_5309 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124941.1 6780457 D 485918 CDS YP_003124942.1 256424289 8361487 complement(6781971..6782852) 1 NC_013132.1 PFAM: fatty acid hydroxylase; KEGG: eli:ELI_14060 sterol desaturase family protein; fatty acid hydroxylase 6782852 8361487 Cpin_5310 Chitinophaga pinensis DSM 2588 fatty acid hydroxylase YP_003124942.1 6781971 R 485918 CDS YP_003124943.1 256424290 8361488 complement(6782899..6783057) 1 NC_013132.1 hypothetical protein 6783057 8361488 Cpin_5311 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124943.1 6782899 R 485918 CDS YP_003124944.1 256424291 8361489 complement(6783068..6783190) 1 NC_013132.1 hypothetical protein 6783190 8361489 Cpin_5312 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124944.1 6783068 R 485918 CDS YP_003124945.1 256424292 8361490 complement(6783198..6785036) 1 NC_013132.1 PFAM: sulfatase; KEGG: cti:RALTA_B0519 arylsulfatase precursor; sulfatase 6785036 8361490 Cpin_5313 Chitinophaga pinensis DSM 2588 sulfatase YP_003124945.1 6783198 R 485918 CDS YP_003124946.1 256424293 8361491 complement(6785067..6786527) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6786527 8361491 Cpin_5314 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003124946.1 6785067 R 485918 CDS YP_003124947.1 256424294 8361492 complement(6786556..6789675) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6789675 8361492 Cpin_5315 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124947.1 6786556 R 485918 CDS YP_003124948.1 256424295 8361493 6790417..6791655 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 6791655 8361493 Cpin_5316 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003124948.1 6790417 D 485918 CDS YP_003124949.1 256424296 8361494 complement(6791763..6792635) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_0346 transcriptional regulator, AraC family; AraC family transcriptional regulator 6792635 8361494 Cpin_5317 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124949.1 6791763 R 485918 CDS YP_003124950.1 256424297 8361495 6792799..6794007 1 NC_013132.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pca:Pcar_2625 Bcr/CflA subfamily drug resistance transporter; Bcr/CflA subfamily drug resistance transporter 6794007 8361495 Cpin_5318 Chitinophaga pinensis DSM 2588 Bcr/CflA subfamily drug resistance transporter YP_003124950.1 6792799 D 485918 CDS YP_003124951.1 256424298 8361496 6794071..6794904 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6794904 8361496 Cpin_5319 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124951.1 6794071 D 485918 CDS YP_003124952.1 256424299 8361497 6794918..6795316 1 NC_013132.1 hypothetical protein 6795316 8361497 Cpin_5320 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124952.1 6794918 D 485918 CDS YP_003124953.1 256424300 8361498 6795368..6796072 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_3361 ABC transporter ATP- binding protein; ABC transporter 6796072 8361498 Cpin_5321 Chitinophaga pinensis DSM 2588 ABC transporter YP_003124953.1 6795368 D 485918 CDS YP_003124954.1 256424301 8361499 6796096..6797526 1 NC_013132.1 KEGG: xca:xccb100_3903 ABC transporter permease; hypothetical protein 6797526 8361499 Cpin_5322 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124954.1 6796096 D 485918 CDS YP_003124955.1 256424302 8361500 6797510..6798958 1 NC_013132.1 KEGG: dac:Daci_4459 hypothetical protein; hypothetical protein 6798958 8361500 Cpin_5323 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124955.1 6797510 D 485918 CDS YP_003124956.1 256424303 8361501 6798984..6801116 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ppg:PputGB1_0701 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 6801116 8361501 Cpin_5324 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003124956.1 6798984 D 485918 CDS YP_003124957.1 256424304 8361502 6801185..6801373 1 NC_013132.1 hypothetical protein 6801373 8361502 Cpin_5325 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124957.1 6801185 D 485918 CDS YP_003124958.1 256424305 8361503 complement(6801520..6803364) 1 NC_013132.1 PFAM: lanthionine synthetase C family protein; KEGG: mxa:MXAN_2857 lantibiotic modification protein; lanthionine synthetase C family protein 6803364 8361503 Cpin_5326 Chitinophaga pinensis DSM 2588 lanthionine synthetase C family protein YP_003124958.1 6801520 R 485918 CDS YP_003124959.1 256424306 8361504 complement(6803333..6804169) 1 NC_013132.1 KEGG: bce:BC5083 lantibiotic biosynthesis protein; hypothetical protein 6804169 8361504 Cpin_5327 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124959.1 6803333 R 485918 CDS YP_003124960.1 256424307 8361505 complement(6804173..6806728) 1 NC_013132.1 PFAM: lantibiotic dehydratase; KEGG: bce:BC5084 lanthionine biosynthesis protein; lantibiotic dehydratase 6806728 8361505 Cpin_5328 Chitinophaga pinensis DSM 2588 lantibiotic dehydratase YP_003124960.1 6804173 R 485918 CDS YP_003124961.1 256424308 8361506 complement(6806762..6808969) 1 NC_013132.1 PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eba:ebA1666 fusion of ABC transporter-type transmembrane and ATP binding protein; ABC transporter 6808969 8361506 Cpin_5329 Chitinophaga pinensis DSM 2588 ABC transporter YP_003124961.1 6806762 R 485918 CDS YP_003124962.1 256424309 8361507 complement(6809112..6810401) 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: gme:Gmet_3465 outer membrane efflux protein; outer membrane efflux protein 6810401 8361507 Cpin_5330 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003124962.1 6809112 R 485918 CDS YP_003124963.1 256424310 8361508 complement(6810424..6812001) 1 NC_013132.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: glo:Glov_1631 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 6812001 8361508 Cpin_5331 Chitinophaga pinensis DSM 2588 EmrB/QacA subfamily drug resistance transporter YP_003124963.1 6810424 R 485918 CDS YP_003124964.1 256424311 8361509 complement(6812021..6813064) 1 NC_013132.1 PFAM: secretion protein HlyD family protein; KEGG: vfi:VF_0878 EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component; secretion protein HlyD family protein 6813064 8361509 Cpin_5332 Chitinophaga pinensis DSM 2588 secretion protein HlyD family protein YP_003124964.1 6812021 R 485918 CDS YP_003124965.1 256424312 8361510 6813218..6813682 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: transcriptional regulator, MarR family; MarR family transcriptional regulator 6813682 8361510 Cpin_5333 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003124965.1 6813218 D 485918 CDS YP_003124966.1 256424313 8361511 6814110..6814682 1 NC_013132.1 hypothetical protein 6814682 8361511 Cpin_5334 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124966.1 6814110 D 485918 CDS YP_003124967.1 256424314 8361512 complement(6815079..6815840) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region; LytTR family two component transcriptional regulator 6815840 8361512 Cpin_5335 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003124967.1 6815079 R 485918 CDS YP_003124968.1 256424315 8361513 complement(6815815..6816858) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: aba:Acid345_3292 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase LytS 6816858 8361513 Cpin_5336 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003124968.1 6815815 R 485918 CDS YP_003124969.1 256424316 8361514 6816985..6817533 1 NC_013132.1 PFAM: lipocalin; KEGG: hypothetical protein; lipocalin 6817533 8361514 Cpin_5337 Chitinophaga pinensis DSM 2588 lipocalin YP_003124969.1 6816985 D 485918 CDS YP_003124970.1 256424317 8361515 complement(6817540..6818415) 1 NC_013132.1 PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: tcx:Tcr_2057 fructosamine kinase; fructosamine kinase 6818415 8361515 Cpin_5338 Chitinophaga pinensis DSM 2588 fructosamine kinase YP_003124970.1 6817540 R 485918 CDS YP_003124971.1 256424318 8361516 complement(6818533..6819774) 1 NC_013132.1 PFAM: glucose sorbosone dehydrogenase; KEGG: pzu:PHZ_c0611 glucose dehydrogenase- B, periplasmic protein; glucose sorbosone dehydrogenase 6819774 8361516 Cpin_5339 Chitinophaga pinensis DSM 2588 glucose sorbosone dehydrogenase YP_003124971.1 6818533 R 485918 CDS YP_003124972.1 256424319 8361517 6819887..6820540 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sus:Acid_5720 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 6820540 8361517 Cpin_5340 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003124972.1 6819887 D 485918 CDS YP_003124973.1 256424320 8361518 6820616..6821773 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family; anti-FecI sigma factor FecR 6821773 8361518 Cpin_5341 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003124973.1 6820616 D 485918 CDS YP_003124974.1 256424321 8361519 6821940..6825551 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6825551 8361519 Cpin_5342 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003124974.1 6821940 D 485918 CDS YP_003124975.1 256424322 8361520 6825563..6826921 1 NC_013132.1 hypothetical protein 6826921 8361520 Cpin_5343 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124975.1 6825563 D 485918 CDS YP_003124976.1 256424323 8361521 6827038..6829023 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sfr:Sfri_1234 redoxin domain protein; alkyl hydroperoxide reductase 6829023 8361521 Cpin_5344 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003124976.1 6827038 D 485918 CDS YP_003124977.1 256424324 8361522 6829023..6831629 1 NC_013132.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sus:Acid_0759 peptidase S9 prolyl oligopeptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 6831629 8361522 Cpin_5345 Chitinophaga pinensis DSM 2588 peptidase S9 prolyl oligopeptidase active site domain-containing protein YP_003124977.1 6829023 D 485918 CDS YP_003124978.1 256424325 8361523 complement(6831920..6832951) 1 NC_013132.1 PFAM: lipase class 3; KEGG: plu:plu1516 hypothetical protein; lipase class 3 6832951 8361523 Cpin_5346 Chitinophaga pinensis DSM 2588 lipase class 3 YP_003124978.1 6831920 R 485918 CDS YP_003124979.1 256424326 8361524 complement(6832989..6835049) 1 NC_013132.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_3381 hypothetical protein; hypothetical protein 6835049 8361524 Cpin_5347 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124979.1 6832989 R 485918 CDS YP_003124980.1 256424327 8361525 6835237..6836112 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_0565 AraC family transcriptional regulator; AraC family transcriptional regulator 6836112 8361525 Cpin_5348 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124980.1 6835237 D 485918 CDS YP_003124981.1 256424328 8361526 6836119..6837219 1 NC_013132.1 hypothetical protein 6837219 8361526 Cpin_5349 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124981.1 6836119 D 485918 CDS YP_003124982.1 256424329 8361527 complement(6837367..6837984) 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: bca:BCE_2116 MutT/NUDIX family protein; NUDIX hydrolase 6837984 8361527 Cpin_5350 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003124982.1 6837367 R 485918 CDS YP_003124983.1 256424330 8361528 complement(6838015..6838764) 1 NC_013132.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: esa:ESA_02953 hypothetical protein; DeoR family transcriptional regulator 6838764 8361528 Cpin_5351 Chitinophaga pinensis DSM 2588 DeoR family transcriptional regulator YP_003124983.1 6838015 R 485918 CDS YP_003124984.1 256424331 8361529 complement(6838837..6839685) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_3180 helix-turn-helix domain- containing protein; AraC family transcriptional regulator 6839685 8361529 Cpin_5352 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003124984.1 6838837 R 485918 CDS YP_003124985.1 256424332 8361530 complement(6839817..6841124) 1 NC_013132.1 KEGG: scl:sce6628 secreted protein; hypothetical protein 6841124 8361530 Cpin_5353 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124985.1 6839817 R 485918 CDS YP_003124986.1 256424333 8361531 6841524..6841898 1 NC_013132.1 KEGG: mes:Meso_0331 hypothetical protein; hypothetical protein 6841898 8361531 Cpin_5354 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124986.1 6841524 D 485918 CDS YP_003124987.1 256424334 8361532 6842060..6842659 1 NC_013132.1 TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH- dependent FMN reductase; KEGG: bha:BH1010 hypothetical protein; flavoprotein WrbA 6842659 8361532 Cpin_5355 Chitinophaga pinensis DSM 2588 flavoprotein WrbA YP_003124987.1 6842060 D 485918 CDS YP_003124988.1 256424335 8361533 6842771..6843658 1 NC_013132.1 KEGG: eli:ELI_00245 hypothetical protein; hypothetical protein 6843658 8361533 Cpin_5356 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124988.1 6842771 D 485918 CDS YP_003124989.1 256424336 8361534 6844074..6844475 1 NC_013132.1 hypothetical protein 6844475 8361534 Cpin_5357 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124989.1 6844074 D 485918 CDS YP_003124990.1 256424337 8361535 complement(6844489..6844611) 1 NC_013132.1 hypothetical protein 6844611 8361535 Cpin_5358 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124990.1 6844489 R 485918 CDS YP_003124991.1 256424338 8361536 6844639..6845721 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mfa:Mfla_0374 secretion protein HlyD; RND family efflux transporter MFP subunit 6845721 8361536 Cpin_5359 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003124991.1 6844639 D 485918 CDS YP_003124992.1 256424339 8361537 6845748..6848921 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 6848921 8361537 Cpin_5360 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003124992.1 6845748 D 485918 CDS YP_003124993.1 256424340 8361538 6848914..6850347 1 NC_013132.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mfa:Mfla_0372 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 6850347 8361538 Cpin_5361 Chitinophaga pinensis DSM 2588 NodT family RND efflux system outer membrane lipoprotein YP_003124993.1 6848914 D 485918 CDS YP_003124994.1 256424341 8361539 complement(6850467..6850793) 1 NC_013132.1 KEGG: cps:CPS_2775 hypothetical protein; hypothetical protein 6850793 8361539 Cpin_5362 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124994.1 6850467 R 485918 CDS YP_003124995.1 256424342 8361540 6850990..6852813 1 NC_013132.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: slo:Shew_2207 integral membrane sensor signal transduction histidine kinase; LuxR family transcriptional regulator 6852813 8361540 Cpin_5363 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003124995.1 6850990 D 485918 CDS YP_003124996.1 256424343 8361541 6852879..6853328 1 NC_013132.1 hypothetical protein 6853328 8361541 Cpin_5364 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124996.1 6852879 D 485918 CDS YP_003124997.1 256424344 8361542 complement(6853392..6856658) 1 NC_013132.1 PFAM: hypothetical protein; leucine-rich repeat protein; SMART: hypothetical protein; leucine-rich repeat- containing protein typical subtype; KEGG: GI22874 gene product from transcript GI22874- RA; hypothetical protein 6856658 8361542 Cpin_5365 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124997.1 6853392 R 485918 CDS YP_003124998.1 256424345 8361543 complement(6856695..6857282) 1 NC_013132.1 hypothetical protein 6857282 8361543 Cpin_5366 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124998.1 6856695 R 485918 CDS YP_003124999.1 256424346 8361544 complement(6857810..6858793) 1 NC_013132.1 hypothetical protein 6858793 8361544 Cpin_5367 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003124999.1 6857810 R 485918 CDS YP_003125000.1 256424347 8361545 complement(6858795..6870578) 1 NC_013132.1 TIGRFAM: outer membrane adhesin like protein; conserved repeat domain protein; SMART: cadherin; KEGG: cja:CJA_1396 hemolysin; outer membrane adhesin-like protein 6870578 8361545 Cpin_5368 Chitinophaga pinensis DSM 2588 outer membrane adhesin-like protein YP_003125000.1 6858795 R 485918 CDS YP_003125001.1 256424348 8361546 complement(6870986..6871804) 1 NC_013132.1 PFAM: protein of unknown function DUF159; KEGG: bsu:BSU18660 hypothetical protein; hypothetical protein 6871804 8361546 Cpin_5369 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125001.1 6870986 R 485918 CDS YP_003125002.1 256424349 8361547 complement(6871809..6872300) 1 NC_013132.1 hypothetical protein 6872300 8361547 Cpin_5370 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125002.1 6871809 R 485918 CDS YP_003125003.1 256424350 8361548 6872438..6873163 1 NC_013132.1 hypothetical protein 6873163 8361548 Cpin_5371 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125003.1 6872438 D 485918 CDS YP_003125004.1 256424351 8361549 6873326..6873772 1 NC_013132.1 KEGG: pde:Pden_4731 methylamine utilisation MauE; hypothetical protein 6873772 8361549 Cpin_5372 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125004.1 6873326 D 485918 CDS YP_003125005.1 256424352 8361550 6873784..6874839 1 NC_013132.1 hypothetical protein 6874839 8361550 Cpin_5373 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125005.1 6873784 D 485918 CDS YP_003125006.1 256424353 8361551 6874926..6875186 1 NC_013132.1 hypothetical protein 6875186 8361551 Cpin_5374 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125006.1 6874926 D 485918 CDS YP_003125007.1 256424354 8361552 complement(6875262..6876011) 1 NC_013132.1 KEGG: rlt:Rleg2_5325 hypothetical protein; hypothetical protein 6876011 8361552 Cpin_5375 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125007.1 6875262 R 485918 CDS YP_003125008.1 256424355 8361554 complement(6876472..6877368) 1 NC_013132.1 hypothetical protein 6877368 8361554 Cpin_5377 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125008.1 6876472 R 485918 CDS YP_003125009.1 256424356 8361555 6877755..6880025 1 NC_013132.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: catalase (peroxidase I); K03782 catalase/peroxidase; catalase/peroxidase HPI 6880025 8361555 Cpin_5378 Chitinophaga pinensis DSM 2588 catalase/peroxidase HPI YP_003125009.1 6877755 D 485918 CDS YP_003125010.1 256424357 8361556 6880181..6881068 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1629 AraC family transcription regulator; AraC family transcriptional regulator 6881068 8361556 Cpin_5379 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125010.1 6880181 D 485918 CDS YP_003125011.1 256424358 8361557 6881135..6881875 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll2196 short chain oxidoreductase; short-chain dehydrogenase/reductase SDR 6881875 8361557 Cpin_5380 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125011.1 6881135 D 485918 CDS YP_003125012.1 256424359 8361558 complement(6881961..6882359) 1 NC_013132.1 PFAM: cupin; KEGG: bja:bll4011 hypothetical protein; cupin 6882359 8361558 Cpin_5381 Chitinophaga pinensis DSM 2588 cupin YP_003125012.1 6881961 R 485918 CDS YP_003125013.1 256424360 8361559 6882917..6883951 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_1132 signal transduction histidine kinase, LytS; signal transduction histidine kinase LytS 6883951 8361559 Cpin_5382 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003125013.1 6882917 D 485918 CDS YP_003125014.1 256424361 8361560 6883951..6884658 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 6884658 8361560 Cpin_5383 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003125014.1 6883951 D 485918 CDS YP_003125015.1 256424362 8361561 6884754..6885206 1 NC_013132.1 hypothetical protein 6885206 8361561 Cpin_5384 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125015.1 6884754 D 485918 CDS YP_003125016.1 256424363 8361562 6885338..6885973 1 NC_013132.1 PFAM: OmpW family protein; KEGG: mmr:Mmar10_0595 OmpW family protein; OmpW family protein 6885973 8361562 Cpin_5385 Chitinophaga pinensis DSM 2588 OmpW family protein YP_003125016.1 6885338 D 485918 CDS YP_003125017.1 256424364 8361563 complement(6885987..6886799) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmr:PMI1962 AraC-family transcriptional regulator; AraC family transcriptional regulator 6886799 8361563 Cpin_5386 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125017.1 6885987 R 485918 CDS YP_003125018.1 256424365 8361564 complement(6886865..6887890) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase; short-chain dehydrogenase/reductase SDR 6887890 8361564 Cpin_5387 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125018.1 6886865 R 485918 CDS YP_003125019.1 256424366 8361565 complement(6888106..6889002) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_2607 transcriptional regulator, AraC family; AraC family transcriptional regulator 6889002 8361565 Cpin_5388 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125019.1 6888106 R 485918 CDS YP_003125020.1 256424367 8361566 6889251..6893495 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein; histidine kinase 6893495 8361566 Cpin_5389 Chitinophaga pinensis DSM 2588 histidine kinase YP_003125020.1 6889251 D 485918 CDS YP_003125021.1 256424368 8361567 6893562..6895235 1 NC_013132.1 KEGG: afw:Anae109_3225 glycoside hydrolase family protein; hypothetical protein 6895235 8361567 Cpin_5390 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125021.1 6893562 D 485918 CDS YP_003125022.1 256424369 8361568 6895297..6895962 1 NC_013132.1 hypothetical protein 6895962 8361568 Cpin_5391 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125022.1 6895297 D 485918 CDS YP_003125023.1 256424370 8361569 complement(6896016..6896942) 1 NC_013132.1 hypothetical protein 6896942 8361569 Cpin_5392 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125023.1 6896016 R 485918 CDS YP_003125024.1 256424371 8361570 complement(6896933..6897961) 1 NC_013132.1 PFAM: glycoside hydrolase family 26; KEGG: hypothetical protein; glycoside hydrolase 6897961 8361570 Cpin_5393 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125024.1 6896933 R 485918 CDS YP_003125025.1 256424372 8361571 complement(6897973..6898896) 1 NC_013132.1 hypothetical protein 6898896 8361571 Cpin_5394 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125025.1 6897973 R 485918 CDS YP_003125026.1 256424373 8361572 complement(6898906..6900426) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 6900426 8361572 Cpin_5395 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125026.1 6898906 R 485918 CDS YP_003125027.1 256424374 8361573 complement(6900445..6903516) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6903516 8361573 Cpin_5396 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125027.1 6900445 R 485918 CDS YP_003125028.1 256424375 8361574 6903711..6904895 1 NC_013132.1 PFAM: glycosidase PH1107-related; KEGG: cja:CJA_0242 hypothetical protein; glycosidase PH1107-like protein 6904895 8361574 Cpin_5397 Chitinophaga pinensis DSM 2588 glycosidase PH1107-like protein YP_003125028.1 6903711 D 485918 CDS YP_003125029.1 256424376 8361575 6904899..6906314 1 NC_013132.1 TIGRFAM: sugar (glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_2284 cation symporter; sugar (glycoside-Pentoside-Hexuronide) transporter 6906314 8361575 Cpin_5398 Chitinophaga pinensis DSM 2588 sugar (glycoside-Pentoside-Hexuronide) transporter YP_003125029.1 6904899 D 485918 CDS YP_003125030.1 256424377 8361576 6906241..6907452 1 NC_013132.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: cja:CJA_0243 Unk2; N-acylglucosamine 2-epimerase 6907452 8361576 Cpin_5399 Chitinophaga pinensis DSM 2588 N-acylglucosamine 2-epimerase YP_003125030.1 6906241 D 485918 CDS YP_003125031.1 256424378 8361577 complement(6907488..6908210) 1 NC_013132.1 KEGG: ilo:IL0782 hypothetical protein; hypothetical protein 6908210 8361577 Cpin_5400 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125031.1 6907488 R 485918 CDS YP_003125032.1 256424379 8361578 6908638..6909246 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 6909246 8361578 Cpin_5401 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125032.1 6908638 D 485918 CDS YP_003125033.1 256424380 8361579 6909293..6909997 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: cti:RALTA_B0404 2-hydroxy-6-ketonone-2,4- dienedioic acid hydrolase; alpha/beta hydrolase 6909997 8361579 Cpin_5402 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003125033.1 6909293 D 485918 CDS YP_003125034.1 256424381 8361580 complement(6910063..6910452) 1 NC_013132.1 PFAM: endoribonuclease L-PSP; KEGG: mch:Mchl_5535 endoribonuclease L-PSP; endoribonuclease L-PSP 6910452 8361580 Cpin_5403 Chitinophaga pinensis DSM 2588 endoribonuclease L-PSP YP_003125034.1 6910063 R 485918 CDS YP_003125035.1 256424382 8361581 complement(6910560..6911114) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 6911114 8361581 Cpin_5404 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125035.1 6910560 R 485918 CDS YP_003125036.1 256424383 8361582 6911311..6912132 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_0037 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 6912132 8361582 Cpin_5405 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125036.1 6911311 D 485918 CDS YP_003125037.1 256424384 8361584 6912408..6914243 1 NC_013132.1 PFAM: TonB-dependent receptor; KEGG: ccr:CC_0815 TonB-dependent receptor; TonB-dependent receptor 6914243 8361584 Cpin_5407 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125037.1 6912408 D 485918 CDS YP_003125038.1 256424385 8361585 complement(6914240..6914680) 1 NC_013132.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dar:Daro_0623 CBS; signal transduction protein with CBS domains 6914680 8361585 Cpin_5408 Chitinophaga pinensis DSM 2588 signal transduction protein with CBS domains YP_003125038.1 6914240 R 485918 CDS YP_003125039.1 256424386 8361586 6914874..6916004 1 NC_013132.1 PFAM: glycosyl hydrolase family 88; KEGG: see:SNSL254_A2071 glycosyl hydrolase, family 88; glycoside hydrolase 6916004 8361586 Cpin_5409 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125039.1 6914874 D 485918 CDS YP_003125040.1 256424387 8361587 6916038..6917984 1 NC_013132.1 KEGG: swp:swp_2453 alpha-glucosidase; alpha-glucosidase 6917984 8361587 Cpin_5410 Chitinophaga pinensis DSM 2588 alpha-glucosidase YP_003125040.1 6916038 D 485918 CDS YP_003125041.1 256424388 8361588 complement(6918112..6919872) 1 NC_013132.1 PFAM: glycoside hydrolase family 35; KEGG: bph:Bphy_6542 beta-galactosidase; beta-galactosidase 6919872 8361588 Cpin_5411 Chitinophaga pinensis DSM 2588 beta-galactosidase YP_003125041.1 6918112 R 485918 CDS YP_003125042.1 256424389 8361589 6920535..6921221 1 NC_013132.1 hypothetical protein 6921221 8361589 Cpin_5412 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125042.1 6920535 D 485918 CDS YP_003125043.1 256424390 8361590 complement(6921507..6922463) 1 NC_013132.1 hypothetical protein 6922463 8361590 Cpin_5413 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125043.1 6921507 R 485918 CDS YP_003125044.1 256424391 8361591 complement(6922498..6923898) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 6923898 8361591 Cpin_5414 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125044.1 6922498 R 485918 CDS YP_003125045.1 256424392 8361592 complement(6924237..6925934) 1 NC_013132.1 KEGG: pzu:PHZ_c2153 choline dehydrogenase; choline dehydrogenase 6925934 8361592 Cpin_5415 Chitinophaga pinensis DSM 2588 choline dehydrogenase YP_003125045.1 6924237 R 485918 CDS YP_003125046.1 256424393 8361593 complement(6926013..6927710) 1 NC_013132.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: smt:Smal_1042 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 6927710 8361593 Cpin_5416 Chitinophaga pinensis DSM 2588 glucose-methanol-choline oxidoreductase YP_003125046.1 6926013 R 485918 CDS YP_003125047.1 256424394 8361594 complement(6927764..6928339) 1 NC_013132.1 KEGG: amc:MADE_00435 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 6928339 8361594 Cpin_5417 Chitinophaga pinensis DSM 2588 twin-arginine translocation pathway signal YP_003125047.1 6927764 R 485918 CDS YP_003125048.1 256424395 8361595 complement(6928499..6929257) 1 NC_013132.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sde:Sde_1211 2-dehydro-3-deoxyphosphooctonate aldolase; ErfK/YbiS/YcfS/YnhG family protein 6929257 8361595 Cpin_5418 Chitinophaga pinensis DSM 2588 ErfK/YbiS/YcfS/YnhG family protein YP_003125048.1 6928499 R 485918 CDS YP_003125049.1 256424396 8361596 complement(6929300..6929518) 1 NC_013132.1 hypothetical protein 6929518 8361596 Cpin_5419 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125049.1 6929300 R 485918 CDS YP_003125050.1 256424397 8361597 complement(6929856..6930992) 1 NC_013132.1 KEGG: sus:Acid_4167 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 6930992 8361597 Cpin_5420 Chitinophaga pinensis DSM 2588 4-hydroxyphenylpyruvate dioxygenase YP_003125050.1 6929856 R 485918 CDS YP_003125051.1 256424398 8361598 complement(6931380..6931964) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 6931964 8361598 Cpin_5421 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003125051.1 6931380 R 485918 CDS YP_003125052.1 256424399 8361599 6932322..6932918 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: pmu:PM1135 hypothetical protein; TetR family transcriptional regulator 6932918 8361599 Cpin_5422 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003125052.1 6932322 D 485918 CDS YP_003125053.1 256424400 8361600 6932944..6934092 1 NC_013132.1 PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_1438 monooxygenase, FAD-binding; FAD-binding monooxygenase 6934092 8361600 Cpin_5423 Chitinophaga pinensis DSM 2588 FAD-binding monooxygenase YP_003125053.1 6932944 D 485918 CDS YP_003125054.1 256424401 8361601 complement(6934096..6934878) 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: similar to sphingolipid delta 4 desaturase/C- 4 hydroxylase protein DES2; K04712 sphingolipid delta-4 desaturase; fatty acid desaturase 6934878 8361601 Cpin_5424 Chitinophaga pinensis DSM 2588 fatty acid desaturase YP_003125054.1 6934096 R 485918 CDS YP_003125055.1 256424402 8361602 complement(6935075..6936067) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: rle:pRL120760 aldo-keto reductase protein; aldo/keto reductase 6936067 8361602 Cpin_5425 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003125055.1 6935075 R 485918 CDS YP_003125056.1 256424403 8361603 6936190..6936399 1 NC_013132.1 hypothetical protein 6936399 8361603 Cpin_5426 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125056.1 6936190 D 485918 CDS YP_003125057.1 256424404 8361604 complement(6936610..6937767) 1 NC_013132.1 PFAM: homogentisate 12-dioxygenase; KEGG: bcy:Bcer98_0230 homogentisate 12-dioxygenase; homogentisate 12-dioxygenase 6937767 8361604 Cpin_5427 Chitinophaga pinensis DSM 2588 homogentisate 12-dioxygenase YP_003125057.1 6936610 R 485918 CDS YP_003125058.1 256424405 8361605 6937773..6937967 1 NC_013132.1 hypothetical protein 6937967 8361605 Cpin_5428 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125058.1 6937773 D 485918 CDS YP_003125059.1 256424406 8361606 6938542..6940989 1 NC_013132.1 KEGG: AK-HSDH/AK-HSDH_I; AK-HSDH/AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase; K00003 homoserine dehydrogenase; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; aspartate/glutamate/uridylate kinase; aspartate kinase 6940989 8361606 Cpin_5429 Chitinophaga pinensis DSM 2588 aspartate kinase YP_003125059.1 6938542 D 485918 CDS YP_003125060.1 256424407 8361607 6941173..6942108 1 NC_013132.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 6942108 8361607 Cpin_5430 Chitinophaga pinensis DSM 2588 homoserine kinase YP_003125060.1 6941173 D 485918 CDS YP_003125061.1 256424408 8361608 6942115..6943422 1 NC_013132.1 KEGG: sfv:SFV_0003 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 6943422 8361608 Cpin_5431 Chitinophaga pinensis DSM 2588 threonine synthase YP_003125061.1 6942115 D 485918 CDS YP_003125062.1 256424409 8361609 6943558..6944565 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: TPR Domain containing protein; hypothetical protein 6944565 8361609 Cpin_5432 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125062.1 6943558 D 485918 CDS YP_003125063.1 256424410 8361610 6944649..6945308 1 NC_013132.1 KEGG: glo:Glov_3613 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 6945308 8361610 Cpin_5433 Chitinophaga pinensis DSM 2588 ribulose-phosphate 3-epimerase YP_003125063.1 6944649 D 485918 CDS YP_003125064.1 256424411 8361611 complement(6945530..6945925) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0829 response regulator receiver protein; response regulator receiver protein 6945925 8361611 Cpin_5434 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003125064.1 6945530 R 485918 CDS YP_003125065.1 256424412 8361612 complement(6945934..6948147) 1 NC_013132.1 KEGG: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS/PAC sensor signal transduction histidine kinase 6948147 8361612 Cpin_5435 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003125065.1 6945934 R 485918 CDS YP_003125066.1 256424413 8361613 6948684..6949643 1 NC_013132.1 PFAM: PhoH family protein; KEGG: bcy:Bcer98_3031 PhoH family protein; PhoH family protein 6949643 8361613 Cpin_5436 Chitinophaga pinensis DSM 2588 PhoH family protein YP_003125066.1 6948684 D 485918 CDS YP_003125067.1 256424414 8361614 6949675..6949797 1 NC_013132.1 hypothetical protein 6949797 8361614 Cpin_5437 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125067.1 6949675 D 485918 CDS YP_003125068.1 256424415 8361615 6949862..6950329 1 NC_013132.1 KEGG: noc:Noc_2135 hypothetical protein; hypothetical protein 6950329 8361615 Cpin_5438 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125068.1 6949862 D 485918 CDS YP_003125069.1 256424416 8361616 6950557..6951102 1 NC_013132.1 PFAM: inorganic pyrophosphatase; KEGG: inorganic pyrophosphatase family protein; K01507 inorganic pyrophosphatase; inorganic diphosphatase 6951102 8361616 Cpin_5439 Chitinophaga pinensis DSM 2588 inorganic diphosphatase YP_003125069.1 6950557 D 485918 CDS YP_003125070.1 256424417 8361617 complement(6951180..6951971) 1 NC_013132.1 PFAM: NLP/P60 protein; KEGG: aba:Acid345_4057 NLP/P60; NLP/P60 protein 6951971 8361617 Cpin_5440 Chitinophaga pinensis DSM 2588 NLP/P60 protein YP_003125070.1 6951180 R 485918 CDS YP_003125071.1 256424418 8361618 6952053..6952625 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: hypothetical protein LOC446951; ECF subfamily RNA polymerase sigma-24 subunit 6952625 8361618 Cpin_5441 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125071.1 6952053 D 485918 CDS YP_003125072.1 256424419 8361619 6952618..6953724 1 NC_013132.1 KEGG: hypothetical protein; transmembrane anti-sigma factor 6953724 8361619 Cpin_5442 Chitinophaga pinensis DSM 2588 transmembrane anti-sigma factor YP_003125072.1 6952618 D 485918 CDS YP_003125073.1 256424420 8361620 6953875..6954441 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: afw:Anae109_2126 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 6954441 8361620 Cpin_5443 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125073.1 6953875 D 485918 CDS YP_003125074.1 256424421 8361621 6954485..6954841 1 NC_013132.1 KEGG: bha:BH3217 hypothetical protein; transmembrane anti-sigma factor 6954841 8361621 Cpin_5444 Chitinophaga pinensis DSM 2588 transmembrane anti-sigma factor YP_003125074.1 6954485 D 485918 CDS YP_003125075.1 256424422 8361622 complement(6954919..6956166) 1 NC_013132.1 KEGG: sde:Sde_0178 hypothetical protein; hypothetical protein 6956166 8361622 Cpin_5445 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125075.1 6954919 R 485918 CDS YP_003125076.1 256424423 8361623 complement(6956295..6958874) 1 NC_013132.1 KEGG: gbm:Gbem_0005 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A; DNA gyrase subunit A 6958874 8361623 Cpin_5446 Chitinophaga pinensis DSM 2588 DNA gyrase subunit A YP_003125076.1 6956295 R 485918 CDS YP_003125077.1 256424424 8361624 6959280..6960605 1 NC_013132.1 PFAM: saccharopine dehydrogenase; KEGG: similar to R02D3.1; saccharopine dehydrogenase 6960605 8361624 Cpin_5447 Chitinophaga pinensis DSM 2588 saccharopine dehydrogenase YP_003125077.1 6959280 D 485918 CDS YP_003125078.1 256424425 8361625 complement(6960716..6961405) 1 NC_013132.1 PFAM: silent information regulator protein Sir2; KEGG: dps:DP3103 hypothetical protein; silent information regulator protein Sir2 6961405 8361625 Cpin_5448 Chitinophaga pinensis DSM 2588 silent information regulator protein Sir2 YP_003125078.1 6960716 R 485918 CDS YP_003125079.1 256424426 8361626 6961486..6962340 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: sus:Acid_4842 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 6962340 8361626 Cpin_5449 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003125079.1 6961486 D 485918 CDS YP_003125080.1 256424427 8361627 complement(6962542..6963492) 1 NC_013132.1 KEGG: bha:BH1584 hypothetical protein; hypothetical protein 6963492 8361627 Cpin_5450 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125080.1 6962542 R 485918 CDS YP_003125081.1 256424428 8361628 complement(6963563..6963976) 1 NC_013132.1 PFAM: protein of unknown function DUF55; KEGG: rce:RC1_2357 hypothetical protein; hypothetical protein 6963976 8361628 Cpin_5451 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125081.1 6963563 R 485918 CDS YP_003125082.1 256424429 8361629 complement(6964007..6964726) 1 NC_013132.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: sus:Acid_5763 hypothetical protein; hypothetical protein 6964726 8361629 Cpin_5452 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125082.1 6964007 R 485918 CDS YP_003125083.1 256424430 8361630 complement(6964852..6965343) 1 NC_013132.1 KEGG: bha:BH1557 riboflavin synthase subunit beta; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 6965343 8361630 Cpin_5453 Chitinophaga pinensis DSM 2588 6,7-dimethyl-8-ribityllumazine synthase YP_003125083.1 6964852 R 485918 CDS YP_003125084.1 256424431 8361631 complement(6965358..6966071) 1 NC_013132.1 SMART: hypothetical protein; KEGG: GK17986 gene product from transcript GK17986- RA; hypothetical protein 6966071 8361631 Cpin_5454 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125084.1 6965358 R 485918 CDS YP_003125085.1 256424432 8361632 complement(6966210..6967220) 1 NC_013132.1 KEGG: wpi:WPa_0086 pyruvate dehydrogenase complex, E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 6967220 8361632 Cpin_5455 Chitinophaga pinensis DSM 2588 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha YP_003125085.1 6966210 R 485918 CDS YP_003125086.1 256424433 8361633 6967404..6968486 1 NC_013132.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: bcy:Bcer98_0004 recombination protein F; DNA replication and repair protein RecF 6968486 8361633 Cpin_5456 Chitinophaga pinensis DSM 2588 DNA replication and repair protein RecF YP_003125086.1 6967404 D 485918 CDS YP_003125087.1 256424434 8361634 6968511..6968798 1 NC_013132.1 PFAM: protein of unknown function DUF721; KEGG: ppd:Ppro_1102 hypothetical protein; hypothetical protein 6968798 8361634 Cpin_5457 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125087.1 6968511 D 485918 CDS YP_003125088.1 256424435 8361635 6969064..6970209 1 NC_013132.1 KEGG: pfo:Pfl01_1439 hypothetical protein; hypothetical protein 6970209 8361635 Cpin_5458 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125088.1 6969064 D 485918 CDS YP_003125089.1 256424436 8361636 complement(6970274..6970783) 1 NC_013132.1 hypothetical protein 6970783 8361636 Cpin_5459 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125089.1 6970274 R 485918 CDS YP_003125090.1 256424437 8361637 complement(6970816..6971337) 1 NC_013132.1 hypothetical protein 6971337 8361637 Cpin_5460 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125090.1 6970816 R 485918 CDS YP_003125091.1 256424438 8361638 complement(6971375..6971890) 1 NC_013132.1 hypothetical protein 6971890 8361638 Cpin_5461 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125091.1 6971375 R 485918 CDS YP_003125092.1 256424439 8361639 complement(6971880..6972395) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ajs:Ajs_2415 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 6972395 8361639 Cpin_5462 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125092.1 6971880 R 485918 CDS YP_003125093.1 256424440 8361640 complement(6972578..6973630) 1 NC_013132.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1184 dipeptide ABC transporter, permease protein; dipeptide ABC transporter permease 6973630 8361640 Cpin_5463 Chitinophaga pinensis DSM 2588 dipeptide ABC transporter permease YP_003125093.1 6972578 R 485918 CDS YP_003125094.1 256424441 8361641 complement(6973636..6974724) 1 NC_013132.1 PFAM: DoxX family protein; KEGG: DoxX family protein; DoxX family protein 6974724 8361641 Cpin_5464 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003125094.1 6973636 R 485918 CDS YP_003125095.1 256424442 8361642 6974814..6975674 1 NC_013132.1 KEGG: vvy:VV2714 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 6975674 8361642 Cpin_5465 Chitinophaga pinensis DSM 2588 dihydropteroate synthase YP_003125095.1 6974814 D 485918 CDS YP_003125096.1 256424443 8361643 6975704..6976516 1 NC_013132.1 PFAM: protein of unknown function DUF147; KEGG: pca:Pcar_0999 hypothetical protein; hypothetical protein 6976516 8361643 Cpin_5466 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125096.1 6975704 D 485918 CDS YP_003125097.1 256424444 8361644 complement(6976835..6977710) 1 NC_013132.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: dps:DP1645 peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 6977710 8361644 Cpin_5467 Chitinophaga pinensis DSM 2588 FKBP-type peptidylprolyl isomerase YP_003125097.1 6976835 R 485918 CDS YP_003125098.1 256424445 8361645 complement(6977738..6978742) 1 NC_013132.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: phosphoesterase RecJ domain protein; K06881; phosphoesterase RecJ domain-containing protein 6978742 8361645 Cpin_5468 Chitinophaga pinensis DSM 2588 phosphoesterase RecJ domain-containing protein YP_003125098.1 6977738 R 485918 CDS YP_003125099.1 256424446 8361646 6978903..6979322 1 NC_013132.1 KEGG: GK19226 gene product from transcript GK19226- RA; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 6979322 8361646 Cpin_5469 Chitinophaga pinensis DSM 2588 nucleoside-diphosphate kinase YP_003125099.1 6978903 D 485918 CDS YP_003125100.1 256424447 8361647 6979376..6980326 1 NC_013132.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bcy:Bcer98_2788 site-specific tyrosine recombinase XerD; tyrosine recombinase XerD 6980326 8361647 Cpin_5470 Chitinophaga pinensis DSM 2588 tyrosine recombinase XerD YP_003125100.1 6979376 D 485918 CDS YP_003125101.1 256424448 8361648 6980731..6981708 1 NC_013132.1 KEGG: bcn:Bcen_3596 phosphatidylinositol-specific phospholipase C, X region; PFAM: phosphatidylinositol-specific phospholipase C X region; SMART: phosphatidylinositol-specific phospholipase C X region; phosphatidylinositol diacylglycerol-lyase 6981708 8361648 Cpin_5471 Chitinophaga pinensis DSM 2588 phosphatidylinositol diacylglycerol-lyase YP_003125101.1 6980731 D 485918 CDS YP_003125102.1 256424449 8361649 complement(6981954..6982820) 1 NC_013132.1 KEGG: pin:Ping_3080 hypothetical protein; hypothetical protein 6982820 8361649 Cpin_5472 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125102.1 6981954 R 485918 CDS YP_003125103.1 256424450 8361650 6983253..6983660 1 NC_013132.1 hypothetical protein 6983660 8361650 Cpin_5473 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125103.1 6983253 D 485918 CDS YP_003125104.1 256424451 8361651 6983718..6984356 1 NC_013132.1 hypothetical protein 6984356 8361651 Cpin_5474 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125104.1 6983718 D 485918 CDS YP_003125105.1 256424452 8361652 6984353..6985156 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: rfr:Rfer_0893 response regulator receiver sensor signal transduction histidine kinase; histidine kinase 6985156 8361652 Cpin_5475 Chitinophaga pinensis DSM 2588 histidine kinase YP_003125105.1 6984353 D 485918 CDS YP_003125106.1 256424453 8361653 6985293..6985952 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bha:BH3628 two-component response regulator involved in degradative enzyme; LuxR family transcriptional regulator 6985952 8361653 Cpin_5476 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003125106.1 6985293 D 485918 CDS YP_003125107.1 256424454 8361654 6986021..6986863 1 NC_013132.1 KEGG: mxa:MXAN_6196 hypothetical protein; hypothetical protein 6986863 8361654 Cpin_5477 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125107.1 6986021 D 485918 CDS YP_003125108.1 256424455 8361655 complement(6987059..6988765) 1 NC_013132.1 PFAM: Na+/solute symporter; KEGG: mxa:MXAN_6190 transporter, solute:sodium symporter (SSS) family; Na+/solute symporter 6988765 8361655 Cpin_5478 Chitinophaga pinensis DSM 2588 Na+/solute symporter YP_003125108.1 6987059 R 485918 CDS YP_003125109.1 256424456 8361656 complement(6988762..6988878) 1 NC_013132.1 hypothetical protein 6988878 8361656 Cpin_5479 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125109.1 6988762 R 485918 CDS YP_003125110.1 256424457 8361657 complement(6989053..6989217) 1 NC_013132.1 hypothetical protein 6989217 8361657 Cpin_5480 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125110.1 6989053 R 485918 CDS YP_003125111.1 256424458 8361658 complement(6989227..6991704) 1 NC_013132.1 PFAM: LmbE family protein; KEGG: mxa:MXAN_6192 hypothetical protein; LmbE family protein 6991704 8361658 Cpin_5481 Chitinophaga pinensis DSM 2588 LmbE family protein YP_003125111.1 6989227 R 485918 CDS YP_003125112.1 256424459 8361659 complement(6991784..6992113) 1 NC_013132.1 PFAM: protein of unknown function DUF486; KEGG: dvm:DvMF_1476 protein of unknown function DUF486; hypothetical protein 6992113 8361659 Cpin_5482 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125112.1 6991784 R 485918 CDS YP_003125113.1 256424460 8361660 complement(6992648..6992962) 1 NC_013132.1 hypothetical protein 6992962 8361660 Cpin_5483 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125113.1 6992648 R 485918 CDS YP_003125114.1 256424461 8361661 6993345..6993887 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: abo:ABO_1639 RNA polymerase sigma factor RpoE; ECF subfamily RNA polymerase sigma-24 subunit 6993887 8361661 Cpin_5484 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125114.1 6993345 D 485918 CDS YP_003125115.1 256424462 8361662 6994033..6995046 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 6995046 8361662 Cpin_5485 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003125115.1 6994033 D 485918 CDS YP_003125116.1 256424463 8361663 6995061..6998504 1 NC_013132.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 6998504 8361663 Cpin_5486 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125116.1 6995061 D 485918 CDS YP_003125117.1 256424464 8361664 complement(6998583..6999524) 1 NC_013132.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 6999524 pyrB 8361664 pyrB Chitinophaga pinensis DSM 2588 aspartate carbamoyltransferase catalytic subunit YP_003125117.1 6998583 R 485918 CDS YP_003125118.1 256424465 8361665 complement(6999610..7000131) 1 NC_013132.1 PFAM: phosphoribosyltransferase; KEGG: dol:Dole_3195 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 7000131 8361665 Cpin_5488 Chitinophaga pinensis DSM 2588 uracil phosphoribosyltransferase YP_003125118.1 6999610 R 485918 CDS YP_003125119.1 256424466 8361666 7000263..7000742 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: Os06g0196300; hypothetical protein; K03564 peroxiredoxin Q/BCP; alkyl hydroperoxide reductase 7000742 8361666 Cpin_5489 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003125119.1 7000263 D 485918 CDS YP_003125120.1 256424467 8361667 complement(7000857..7002095) 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 7002095 8361667 Cpin_5490 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003125120.1 7000857 R 485918 CDS YP_003125121.1 256424468 8361668 complement(7002452..7004086) 1 NC_013132.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: dps:DP2491 delta-1-pyrroline-5-carboxylate dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 7004086 8361668 Cpin_5491 Chitinophaga pinensis DSM 2588 delta-1-pyrroline-5-carboxylate dehydrogenase YP_003125121.1 7002452 R 485918 CDS YP_003125122.1 256424469 8361669 complement(join(7004392..7005420,7005422..7005481)) 1 NC_013132.1 peptide chain release factor 2 7005481 8361669 Cpin_5492 Chitinophaga pinensis DSM 2588 peptide chain release factor 2 YP_003125122.1 7004392 R 485918 CDS YP_003125123.1 256424470 8361670 7005571..7006374 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7006374 8361670 Cpin_5493 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125123.1 7005571 D 485918 CDS YP_003125124.1 256424471 8361671 7006532..7008184 1 NC_013132.1 PFAM: phosphoglucose isomerase (PGI); KEGG: vvu:VV1_1396 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 7008184 8361671 Cpin_5494 Chitinophaga pinensis DSM 2588 glucose-6-phosphate isomerase YP_003125124.1 7006532 D 485918 CDS YP_003125125.1 256424472 8361672 complement(7008667..7009092) 1 NC_013132.1 SMART: PUR-alpha/beta/gamma DNA/RNA-binding; PUR-alpha/beta/gamma DNA/RNA-binding protein 7009092 8361672 Cpin_5495 Chitinophaga pinensis DSM 2588 PUR-alpha/beta/gamma DNA/RNA-binding protein YP_003125125.1 7008667 R 485918 CDS YP_003125126.1 256424473 8361673 complement(7009252..7011048) 1 NC_013132.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aba:Acid345_1514 ABC transporter, ATPase subunit; ABC transporter 7011048 8361673 Cpin_5496 Chitinophaga pinensis DSM 2588 ABC transporter YP_003125126.1 7009252 R 485918 CDS YP_003125127.1 256424474 8361674 complement(7011128..7012057) 1 NC_013132.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 7012057 8361674 Cpin_5497 Chitinophaga pinensis DSM 2588 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_003125127.1 7011128 R 485918 CDS YP_003125128.1 256424475 8361675 complement(7012193..7013563) 1 NC_013132.1 KEGG: dar:Daro_1907 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: exonuclease; Excinuclease ABC C subunit domain protein; DNA polymerase III subunit epsilon 7013563 8361675 Cpin_5498 Chitinophaga pinensis DSM 2588 DNA polymerase III subunit epsilon YP_003125128.1 7012193 R 485918 CDS YP_003125129.1 256424476 8361676 complement(7013732..7014307) 1 NC_013132.1 KEGG: gbm:Gbem_0816 outer membrane protein; outer membrane protein 7014307 8361676 Cpin_5499 Chitinophaga pinensis DSM 2588 outer membrane protein YP_003125129.1 7013732 R 485918 CDS YP_003125130.1 256424477 8361677 7014617..7015189 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: vfm:VFMJ11_1158 transcriptional regulator, TetR family; TetR family transcriptional regulator 7015189 8361677 Cpin_5500 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003125130.1 7014617 D 485918 CDS YP_003125131.1 256424478 8361678 7015246..7016277 1 NC_013132.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pol:Bpro_5550 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 7016277 8361678 Cpin_5501 Chitinophaga pinensis DSM 2588 NADH:flavin oxidoreductase YP_003125131.1 7015246 D 485918 CDS YP_003125132.1 256424479 8361679 complement(7016618..7018051) 1 NC_013132.1 PFAM: glucuronate isomerase; KEGG: cja:CJA_2772 glucuronate isomerase; glucuronate isomerase 7018051 8361679 Cpin_5502 Chitinophaga pinensis DSM 2588 glucuronate isomerase YP_003125132.1 7016618 R 485918 CDS YP_003125133.1 256424480 8361680 complement(7018081..7019745) 1 NC_013132.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; KEGG: csa:Csal_1735 altronate dehydratase; altronate dehydratase 7019745 8361680 Cpin_5503 Chitinophaga pinensis DSM 2588 altronate dehydratase YP_003125133.1 7018081 R 485918 CDS YP_003125134.1 256424481 8361681 complement(7019758..7021203) 1 NC_013132.1 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 7021203 8361681 Cpin_5504 Chitinophaga pinensis DSM 2588 altronate oxidoreductase YP_003125134.1 7019758 R 485918 CDS YP_003125135.1 256424482 8361682 complement(7021255..7023144) 1 NC_013132.1 PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein; glycoside hydrolase 7023144 8361682 Cpin_5505 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125135.1 7021255 R 485918 CDS YP_003125136.1 256424483 8361683 complement(7023304..7025487) 1 NC_013132.1 PFAM: lipolytic protein G-D-S-L family; glycoside hydrolase family 28; KEGG: sus:Acid_1250 glycoside hydrolase family protein; G-D-S-L family lipolytic protein 7025487 8361683 Cpin_5506 Chitinophaga pinensis DSM 2588 G-D-S-L family lipolytic protein YP_003125136.1 7023304 R 485918 CDS YP_003125137.1 256424484 8361684 complement(7025508..7027157) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 7027157 8361684 Cpin_5507 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125137.1 7025508 R 485918 CDS YP_003125138.1 256424485 8361685 complement(7027184..7030144) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7030144 8361685 Cpin_5508 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125138.1 7027184 R 485918 CDS YP_003125139.1 256424486 8361686 7030312..7030413 1 NC_013132.1 hypothetical protein 7030413 8361686 Cpin_5509 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125139.1 7030312 D 485918 CDS YP_003125140.1 256424487 8361687 7030528..7031754 1 NC_013132.1 KEGG: GH12867 gene product from transcript GH12867- RA; hypothetical protein 7031754 8361687 Cpin_5510 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125140.1 7030528 D 485918 CDS YP_003125141.1 256424488 8361688 complement(7031812..7033422) 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: cja:CJA_3601 beta-xylosidase/alpha-L- arabinfuranosidase, , gly43I; glycoside hydrolase 7033422 8361688 Cpin_5511 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125141.1 7031812 R 485918 CDS YP_003125142.1 256424489 8361689 7033503..7034525 1 NC_013132.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator 7034525 8361689 Cpin_5512 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003125142.1 7033503 D 485918 CDS YP_003125143.1 256424490 8361690 complement(7034528..7035535) 1 NC_013132.1 KEGG: gsu:GSU1629 glyceraldehyde 3-phosphate dehydrogenase 1; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 7035535 8361690 Cpin_5513 Chitinophaga pinensis DSM 2588 glyceraldehyde-3-phosphate dehydrogenase YP_003125143.1 7034528 R 485918 CDS YP_003125144.1 256424491 8361691 complement(7035556..7036560) 1 NC_013132.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_3529 AraC family transcriptional regulator; AraC family transcriptional regulator 7036560 8361691 Cpin_5514 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125144.1 7035556 R 485918 CDS YP_003125145.1 256424492 8361692 7036618..7037493 1 NC_013132.1 KEGG: bvi:Bcep1808_3951 AraC family transcriptional regulator; AraC family transcriptional regulator 7037493 8361692 Cpin_5515 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125145.1 7036618 D 485918 CDS YP_003125146.1 256424493 8361693 7037536..7038540 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bca:BCE_2770 oxidoreductase, zinc-binding; alcohol dehydrogenase zinc-binding domain-containing protein 7038540 8361693 Cpin_5516 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003125146.1 7037536 D 485918 CDS YP_003125147.1 256424494 8361694 7038551..7039462 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 7039462 8361694 Cpin_5517 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125147.1 7038551 D 485918 CDS YP_003125148.1 256424495 8361695 7039532..7040314 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: asa:ASA_1609 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 7040314 8361695 Cpin_5518 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125148.1 7039532 D 485918 CDS YP_003125149.1 256424496 8361696 complement(7040561..7041703) 1 NC_013132.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein; glycoside hydrolase 7041703 8361696 Cpin_5519 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125149.1 7040561 R 485918 CDS YP_003125150.1 256424497 8361697 complement(7041721..7043520) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 7043520 8361697 Cpin_5520 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125150.1 7041721 R 485918 CDS YP_003125151.1 256424498 8361698 complement(7043539..7046931) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7046931 8361698 Cpin_5521 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125151.1 7043539 R 485918 CDS YP_003125152.1 256424499 8361699 complement(7047018..7047953) 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 7047953 8361699 Cpin_5522 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003125152.1 7047018 R 485918 CDS YP_003125153.1 256424500 8361700 complement(7048186..7048779) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: rpt:Rpal_0706 RNA polymerase, sigma-24 subunit, ECF subfamily; LuxR family transcriptional regulator 7048779 8361700 Cpin_5523 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003125153.1 7048186 R 485918 CDS YP_003125154.1 256424501 8361701 complement(7048841..7049833) 1 NC_013132.1 KEGG: sun:SUN_1075 hypothetical protein; hypothetical protein 7049833 8361701 Cpin_5524 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125154.1 7048841 R 485918 CDS YP_003125155.1 256424502 8361702 complement(7049880..7050953) 1 NC_013132.1 PFAM: beta-lactamase; KEGG: mmr:Mmar10_2357 beta-lactamase; beta-lactamase 7050953 8361702 Cpin_5525 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003125155.1 7049880 R 485918 CDS YP_003125156.1 256424503 8361703 complement(7050963..7052090) 1 NC_013132.1 KEGG: bmv:BMASAVP1_A1030 hypothetical protein; 6-phosphogluconolactonase 7052090 8361703 Cpin_5526 Chitinophaga pinensis DSM 2588 6-phosphogluconolactonase YP_003125156.1 7050963 R 485918 CDS YP_003125157.1 256424504 8361704 complement(7052110..7053663) 1 NC_013132.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: sus:Acid_2560 peptidase M1, membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 7053663 8361704 Cpin_5527 Chitinophaga pinensis DSM 2588 peptidase M1 membrane alanine aminopeptidase YP_003125157.1 7052110 R 485918 CDS YP_003125158.1 256424505 8361705 complement(7053685..7054107) 1 NC_013132.1 PFAM: protein of unknown function UPF0047; KEGG: cja:CJA_1686 conserved hypothetical protein TIGR00149; hypothetical protein 7054107 8361705 Cpin_5528 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125158.1 7053685 R 485918 CDS YP_003125159.1 256424506 8361706 7054231..7055076 1 NC_013132.1 PFAM: UspA domain protein; UspA domain-containing protein 7055076 8361706 Cpin_5529 Chitinophaga pinensis DSM 2588 UspA domain-containing protein YP_003125159.1 7054231 D 485918 CDS YP_003125160.1 256424507 8361707 7055184..7056398 1 NC_013132.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; KEGG: noc:Noc_1756 PAS sensor signal transduction histidine kinase; PAS/PAC sensor protein 7056398 8361707 Cpin_5530 Chitinophaga pinensis DSM 2588 PAS/PAC sensor protein YP_003125160.1 7055184 D 485918 CDS YP_003125161.1 256424508 8361708 complement(7056454..7058148) 1 NC_013132.1 hypothetical protein 7058148 8361708 Cpin_5531 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125161.1 7056454 R 485918 CDS YP_003125162.1 256424509 8361709 complement(7058148..7061426) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7061426 8361709 Cpin_5532 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125162.1 7058148 R 485918 CDS YP_003125163.1 256424510 8361710 complement(7061979..7062719) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: ret:RHE_PB00047 serine/threonine- specific protein phosphatase protein; metallophosphoesterase 7062719 8361710 Cpin_5533 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003125163.1 7061979 R 485918 CDS YP_003125164.1 256424511 8361711 complement(7062721..7063500) 1 NC_013132.1 KEGG: mes:Meso_2769 hypothetical protein; hypothetical protein 7063500 8361711 Cpin_5534 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125164.1 7062721 R 485918 CDS YP_003125165.1 256424512 8361712 7063644..7064114 1 NC_013132.1 KEGG: sbm:Shew185_1552 hypothetical protein; hypothetical protein 7064114 8361712 Cpin_5535 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125165.1 7063644 D 485918 CDS YP_003125166.1 256424513 8361714 complement(7064328..7065128) 1 NC_013132.1 KEGG: noc:Noc_2990 hypothetical protein; lysophospholipase 7065128 8361714 Cpin_5537 Chitinophaga pinensis DSM 2588 lysophospholipase YP_003125166.1 7064328 R 485918 CDS YP_003125167.1 256424514 8361715 complement(7065249..7066214) 1 NC_013132.1 PFAM: LytTr DNA-binding region; KEGG: ccs:CCNA_00586 hypothetical response regulator receiver protein; response regulator receiver protein 7066214 8361715 Cpin_5538 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003125167.1 7065249 R 485918 CDS YP_003125168.1 256424515 8361717 7067938..7068384 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcz:pE33L466_0360 MarR family transcriptional regulator; MarR family transcriptional regulator 7068384 8361717 Cpin_5540 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003125168.1 7067938 D 485918 CDS YP_003125169.1 256424516 8361718 complement(7068459..7068995) 1 NC_013132.1 KEGG: bce:BC2679 hypothetical protein; hypothetical protein 7068995 8361718 Cpin_5541 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125169.1 7068459 R 485918 CDS YP_003125170.1 256424517 8361719 complement(7069155..7070030) 1 NC_013132.1 KEGG: aba:Acid345_3870 hypothetical protein; hypothetical protein 7070030 8361719 Cpin_5542 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125170.1 7069155 R 485918 CDS YP_003125171.1 256424518 8361720 complement(7070055..7072580) 1 NC_013132.1 KEGG: bha:BH0842 hypothetical protein; alpha-L-fucosidase 7072580 8361720 Cpin_5543 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003125171.1 7070055 R 485918 CDS YP_003125172.1 256424519 8361721 7073129..7077049 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein; histidine kinase 7077049 8361721 Cpin_5544 Chitinophaga pinensis DSM 2588 histidine kinase YP_003125172.1 7073129 D 485918 CDS YP_003125173.1 256424520 8361722 7077059..7077628 1 NC_013132.1 KEGG: jan:Jann_0598 hypothetical protein; beta-1 3-glucan synthesis protein 7077628 8361722 Cpin_5545 Chitinophaga pinensis DSM 2588 beta-1 3-glucan synthesis protein YP_003125173.1 7077059 D 485918 CDS YP_003125174.1 256424521 8361723 complement(7077625..7078701) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7078701 8361723 Cpin_5546 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125174.1 7077625 R 485918 CDS YP_003125175.1 256424522 8361724 7078858..7079331 1 NC_013132.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rfr:Rfer_4108 3-demethylubiquinone-9 3- methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 7079331 8361724 Cpin_5547 Chitinophaga pinensis DSM 2588 3-demethylubiquinone-9 3-methyltransferase YP_003125175.1 7078858 D 485918 CDS YP_003125176.1 256424523 8361725 7079936..7082791 1 NC_013132.1 KEGG: ccs:CCNA_00831 alpha-glucosidase; PFAM: glycoside hydrolase family 31; PA14 domain protein; SMART: PA14 domain protein; alpha-glucosidase 7082791 8361725 Cpin_5548 Chitinophaga pinensis DSM 2588 alpha-glucosidase YP_003125176.1 7079936 D 485918 CDS YP_003125177.1 256424524 8361726 7082902..7086012 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7086012 8361726 Cpin_5549 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125177.1 7082902 D 485918 CDS YP_003125178.1 256424525 8361727 7086031..7087593 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 7087593 8361727 Cpin_5550 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125178.1 7086031 D 485918 CDS YP_003125179.1 256424526 8361728 7087623..7088387 1 NC_013132.1 hypothetical protein 7088387 8361728 Cpin_5551 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125179.1 7087623 D 485918 CDS YP_003125180.1 256424527 8361729 complement(7088605..7088997) 1 NC_013132.1 hypothetical protein 7088997 8361729 Cpin_5552 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125180.1 7088605 R 485918 CDS YP_003125181.1 256424528 8361730 complement(7089098..7091227) 1 NC_013132.1 KEGG: chitinase, PFAM: glycoside hydrolase family 19; carbohydrate- binding family V/XII; SMART: carbohydrate-binding protein; chitinase 7091227 8361730 Cpin_5553 Chitinophaga pinensis DSM 2588 chitinase YP_003125181.1 7089098 R 485918 CDS YP_003125182.1 256424529 8361731 7091457..7092317 1 NC_013132.1 KEGG: xcb:XC_1120 xylanase; xylanase 7092317 8361731 Cpin_5554 Chitinophaga pinensis DSM 2588 xylanase YP_003125182.1 7091457 D 485918 CDS YP_003125183.1 256424530 8361732 7092431..7093681 1 NC_013132.1 KEGG: afw:Anae109_2663 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 7093681 8361732 Cpin_5555 Chitinophaga pinensis DSM 2588 PAS/PAC sensor signal transduction histidine kinase YP_003125183.1 7092431 D 485918 CDS YP_003125184.1 256424531 8361733 7093703..7094761 1 NC_013132.1 PFAM: response regulator receiver; cyclic nucleotide-binding; regulatory protein Crp; SMART: response regulator receiver; cyclic nucleotide-binding; regulatory protein Crp; KEGG: lch:Lcho_2296 response regulator receiver sensor signal transduction histidine kinase; Crp/Fnr family transcriptional regulator 7094761 8361733 Cpin_5556 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125184.1 7093703 D 485918 CDS YP_003125185.1 256424532 8361734 7094850..7095233 1 NC_013132.1 hypothetical protein 7095233 8361734 Cpin_5557 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125185.1 7094850 D 485918 CDS YP_003125186.1 256424533 8361735 7095331..7095759 1 NC_013132.1 hypothetical protein 7095759 8361735 Cpin_5558 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125186.1 7095331 D 485918 CDS YP_003125187.1 256424534 8361736 7095853..7096071 1 NC_013132.1 hypothetical protein 7096071 8361736 Cpin_5559 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125187.1 7095853 D 485918 CDS YP_003125188.1 256424535 8361737 7096081..7097190 1 NC_013132.1 KEGG: hypothetical protein LOC100149782; hypothetical protein 7097190 8361737 Cpin_5560 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125188.1 7096081 D 485918 CDS YP_003125189.1 256424536 8361738 complement(7097184..7098542) 1 NC_013132.1 PFAM: RagB/SusD domain protein; KEGG: mxa:MXAN_4747 lipoprotein; RagB/SusD domain-containing protein 7098542 8361738 Cpin_5561 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125189.1 7097184 R 485918 CDS YP_003125190.1 256424537 8361739 complement(7098555..7101797) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7101797 8361739 Cpin_5562 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125190.1 7098555 R 485918 CDS YP_003125191.1 256424538 8361740 complement(7101850..7103085) 1 NC_013132.1 PFAM: FecR protein; KEGG: pen:PSEEN2995 transmembrane sensor, FecR family; anti-FecI sigma factor FecR 7103085 8361740 Cpin_5563 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003125191.1 7101850 R 485918 CDS YP_003125192.1 256424539 8361741 complement(7103139..7103651) 1 NC_013132.1 ECF subfamily RNA polymerase sigma-24 subunit 7103651 8361741 Cpin_5564 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125192.1 7103139 R 485918 CDS YP_003125193.1 256424540 8361742 complement(7103790..7104170) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mxa:MXAN_6735 sensor histidine kinase/response regulator; response regulator receiver protein 7104170 8361742 Cpin_5565 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003125193.1 7103790 R 485918 CDS YP_003125194.1 256424541 8361743 complement(7104198..7107809) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein; histidine kinase HAMP region domain protein; KEGG: ppw:PputW619_2106 multi-sensor hybrid histidine kinase; GAF sensor hybrid histidine kinase 7107809 8361743 Cpin_5566 Chitinophaga pinensis DSM 2588 GAF sensor hybrid histidine kinase YP_003125194.1 7104198 R 485918 CDS YP_003125195.1 256424542 8361744 complement(7107894..7108586) 1 NC_013132.1 PFAM: secretory protein; KEGG: smt:Smal_3351 hypothetical protein; secretory protein 7108586 8361744 Cpin_5567 Chitinophaga pinensis DSM 2588 secretory protein YP_003125195.1 7107894 R 485918 CDS YP_003125196.1 256424543 8361745 complement(7108648..7110069) 1 NC_013132.1 PFAM: protein of unknown function DUF195; KEGG: gur:Gura_0571 hypothetical protein; hypothetical protein 7110069 8361745 Cpin_5568 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125196.1 7108648 R 485918 CDS YP_003125197.1 256424544 8361746 7110368..7110973 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7110973 8361746 Cpin_5569 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125197.1 7110368 D 485918 CDS YP_003125198.1 256424545 8361747 complement(7111055..7112749) 1 NC_013132.1 PFAM: protein of unknown function DUF885; KEGG: hypothetical protein; hypothetical protein 7112749 8361747 Cpin_5570 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125198.1 7111055 R 485918 CDS YP_003125199.1 256424546 8361748 complement(7112761..7114008) 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; KEGG: spl:Spea_0813 FAD dependent oxidoreductase; FAD dependent oxidoreductase 7114008 8361748 Cpin_5571 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003125199.1 7112761 R 485918 CDS YP_003125200.1 256424547 8361749 complement(7114017..7115018) 1 NC_013132.1 PFAM: proline racemase; KEGG: bcs:BCAN_A1830 proline racemase; hydroxyproline-2-epimerase 7115018 8361749 Cpin_5572 Chitinophaga pinensis DSM 2588 hydroxyproline-2-epimerase YP_003125200.1 7114017 R 485918 CDS YP_003125201.1 256424548 8361750 7115245..7118856 1 NC_013132.1 KEGG: rru:Rru_A2361 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; PAS fold- 3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS domain containing protein; multi-sensor hybrid histidine kinase 7118856 8361750 Cpin_5573 Chitinophaga pinensis DSM 2588 multi-sensor hybrid histidine kinase YP_003125201.1 7115245 D 485918 CDS YP_003125202.1 256424549 8361751 complement(7119160..7119402) 1 NC_013132.1 hypothetical protein 7119402 8361751 Cpin_5574 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125202.1 7119160 R 485918 CDS YP_003125203.1 256424550 8361752 7119536..7120498 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 7120498 8361752 Cpin_5575 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125203.1 7119536 D 485918 CDS YP_003125204.1 256424551 8361753 7120600..7121661 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dps:DP2123 multidrug ABC transporter; RND family efflux transporter MFP subunit 7121661 8361753 Cpin_5576 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003125204.1 7120600 D 485918 CDS YP_003125205.1 256424552 8361754 7121671..7124784 1 NC_013132.1 PFAM: acriflavin resistance protein; KEGG: mca:MCA2131 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 7124784 8361754 Cpin_5577 Chitinophaga pinensis DSM 2588 acriflavin resistance protein YP_003125205.1 7121671 D 485918 CDS YP_003125206.1 256424553 8361755 7124805..7126160 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: bte:BTH_II2104 RND efflux system outer membrane lipoprotein; outer membrane efflux protein 7126160 8361755 Cpin_5578 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003125206.1 7124805 D 485918 CDS YP_003125207.1 256424554 8361756 complement(7126268..7128706) 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE0556 TonB-dependent receptor protein; TonB-dependent siderophore receptor 7128706 8361756 Cpin_5579 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003125207.1 7126268 R 485918 CDS YP_003125208.1 256424555 8361757 7128921..7129616 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cja:CJA_0782 DNA-binding response regulator; winged helix family two component transcriptional regulator 7129616 8361757 Cpin_5580 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003125208.1 7128921 D 485918 CDS YP_003125209.1 256424556 8361758 7129778..7131223 1 NC_013132.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: sus:Acid_2499 hypothetical protein; hypothetical protein 7131223 8361758 Cpin_5581 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125209.1 7129778 D 485918 CDS YP_003125210.1 256424557 8361759 7131246..7132187 1 NC_013132.1 PFAM: protein of unknown function DUF403; KEGG: aba:Acid345_3319 protein of unknown function DUF403; hypothetical protein 7132187 8361759 Cpin_5582 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125210.1 7131246 D 485918 CDS YP_003125211.1 256424558 8361760 7132196..7133122 1 NC_013132.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: aba:Acid345_3318 transglutaminase-like; transglutaminase 7133122 8361760 Cpin_5583 Chitinophaga pinensis DSM 2588 transglutaminase YP_003125211.1 7132196 D 485918 CDS YP_003125212.1 256424559 8361761 complement(7133123..7134541) 1 NC_013132.1 PFAM: amino acid permease-associated region; KEGG: aba:Acid345_3285 amino acid transporter; amino acid permease-associated protein 7134541 8361761 Cpin_5584 Chitinophaga pinensis DSM 2588 amino acid permease-associated protein YP_003125212.1 7133123 R 485918 CDS YP_003125213.1 256424560 8361762 complement(7134554..7136002) 1 NC_013132.1 PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_B3713 aldehyde dehydrogenase; aldehyde dehydrogenase 7136002 8361762 Cpin_5585 Chitinophaga pinensis DSM 2588 aldehyde dehydrogenase YP_003125213.1 7134554 R 485918 CDS YP_003125214.1 256424561 8361763 complement(7136013..7136927) 1 NC_013132.1 PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B0873 dihydrodipicolinate synthase; dihydrodipicolinate synthetase 7136927 8361763 Cpin_5586 Chitinophaga pinensis DSM 2588 dihydrodipicolinate synthetase YP_003125214.1 7136013 R 485918 CDS YP_003125215.1 256424562 8361764 7137259..7138134 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: hch:HCH_01299 AraC-type DNA-binding domain- containing protein; AraC family transcriptional regulator 7138134 8361764 Cpin_5587 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125215.1 7137259 D 485918 CDS YP_003125216.1 256424563 8361765 7138478..7139473 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: esa:ESA_00850 hypothetical protein; aldo/keto reductase 7139473 8361765 Cpin_5588 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003125216.1 7138478 D 485918 CDS YP_003125217.1 256424564 8361766 complement(7139714..7140487) 1 NC_013132.1 PFAM: (2R)-phospho-3-sulfolactate synthase ComA; KEGG: (2r)-phospho-3-sulfolactate synthase; K01767; phosphosulfolactate synthase 7140487 8361766 Cpin_5589 Chitinophaga pinensis DSM 2588 phosphosulfolactate synthase YP_003125217.1 7139714 R 485918 CDS YP_003125218.1 256424565 8361767 complement(7140556..7141500) 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sus:Acid_0781 hypothetical protein; hypothetical protein 7141500 8361767 Cpin_5590 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125218.1 7140556 R 485918 CDS YP_003125219.1 256424566 8361768 7141617..7142249 1 NC_013132.1 PFAM: protein of unknown function DUF1470; KEGG: ank:AnaeK_3459 protein of unknown function DUF1470; hypothetical protein 7142249 8361768 Cpin_5591 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125219.1 7141617 D 485918 CDS YP_003125220.1 256424567 8361769 complement(7142303..7143169) 1 NC_013132.1 PFAM: aldose 1-epimerase; KEGG: bcr:BCAH187_A1765 LacX protein; aldose 1-epimerase 7143169 8361769 Cpin_5592 Chitinophaga pinensis DSM 2588 aldose 1-epimerase YP_003125220.1 7142303 R 485918 CDS YP_003125221.1 256424568 8361770 complement(7143216..7143425) 1 NC_013132.1 KEGG: dol:Dole_2318 hypothetical protein; hypothetical protein 7143425 8361770 Cpin_5593 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125221.1 7143216 R 485918 CDS YP_003125222.1 256424569 8361771 complement(7143476..7144888) 1 NC_013132.1 PFAM: beta-lactamase domain protein; rhodanese domain protein; SMART: rhodanese domain protein; KEGG: metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 7144888 8361771 Cpin_5594 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003125222.1 7143476 R 485918 CDS YP_003125223.1 256424570 8361772 complement(7144982..7145389) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0136 response regulator receiver protein; response regulator receiver protein 7145389 8361772 Cpin_5595 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003125223.1 7144982 R 485918 CDS YP_003125224.1 256424571 8361774 7146052..7147110 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: aba:Acid345_3488 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase LytS 7147110 8361774 Cpin_5597 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003125224.1 7146052 D 485918 CDS YP_003125225.1 256424572 8361775 7147275..7147988 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 7147988 8361775 Cpin_5598 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003125225.1 7147275 D 485918 CDS YP_003125226.1 256424573 8361776 7148124..7150724 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor; TonB-dependent receptor 7150724 8361776 Cpin_5599 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125226.1 7148124 D 485918 CDS YP_003125227.1 256424574 8361777 complement(7150814..7151215) 1 NC_013132.1 hypothetical protein 7151215 8361777 Cpin_5600 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125227.1 7150814 R 485918 CDS YP_003125228.1 256424575 8361778 complement(7151351..7151773) 1 NC_013132.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: swi:Swit_1629 stress responsive alpha-beta barrel domain-containing protein; stress responsive protein 7151773 8361778 Cpin_5601 Chitinophaga pinensis DSM 2588 stress responsive protein YP_003125228.1 7151351 R 485918 CDS YP_003125229.1 256424576 8361779 7151959..7153158 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: bja:bll5144 glycosyl transferase; glycosyl transferase family protein 7153158 8361779 Cpin_5602 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003125229.1 7151959 D 485918 CDS YP_003125230.1 256424577 8361780 7153194..7154288 1 NC_013132.1 KEGG: dps:DP2453 glycosyltransferase; glycosyltransferase 7154288 8361780 Cpin_5603 Chitinophaga pinensis DSM 2588 glycosyltransferase YP_003125230.1 7153194 D 485918 CDS YP_003125231.1 256424578 8361781 7154289..7155299 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: dps:DP2455 hypothetical protein; group 1 glycosyl transferase 7155299 8361781 Cpin_5604 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003125231.1 7154289 D 485918 CDS YP_003125232.1 256424579 8361782 complement(7155293..7156738) 1 NC_013132.1 PFAM: glycosidase PH1107-related; KEGG: dps:DP2460 hypothetical protein; glycosidase PH1107-like protein 7156738 8361782 Cpin_5605 Chitinophaga pinensis DSM 2588 glycosidase PH1107-like protein YP_003125232.1 7155293 R 485918 CDS YP_003125233.1 256424580 8361783 7157050..7157889 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: jan:Jann_2050 AraC family transcriptional regulator; AraC family transcriptional regulator 7157889 8361783 Cpin_5606 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125233.1 7157050 D 485918 CDS YP_003125234.1 256424581 8361784 7157972..7159345 1 NC_013132.1 PFAM: glycoside hydrolase family 47; KEGG: glycoside hydrolase family 47 protein; K10084 ER degradation enhancer, mannosidase alpha- like 1; mannosyl-oligosaccharide 1,2-alpha-mannosidase 7159345 8361784 Cpin_5607 Chitinophaga pinensis DSM 2588 mannosyl-oligosaccharide 1,2-alpha-mannosidase YP_003125234.1 7157972 D 485918 CDS YP_003125235.1 256424582 8361785 complement(7159402..7161828) 1 NC_013132.1 KEGG: swp:swp_1410 cytosolic protein; hypothetical protein 7161828 8361785 Cpin_5608 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125235.1 7159402 R 485918 CDS YP_003125236.1 256424583 8361786 7162137..7163144 1 NC_013132.1 hypothetical protein 7163144 8361786 Cpin_5609 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125236.1 7162137 D 485918 CDS YP_003125237.1 256424584 8361787 complement(7163252..7164049) 1 NC_013132.1 PFAM: hypothetical protein; KEGG: bpm:BURPS1710b_1663 hypothetical protein; hypothetical protein 7164049 8361787 Cpin_5610 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125237.1 7163252 R 485918 CDS YP_003125238.1 256424585 8361788 complement(7164052..7164231) 1 NC_013132.1 hypothetical protein 7164231 8361788 Cpin_5611 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125238.1 7164052 R 485918 CDS YP_003125239.1 256424586 8361789 7164320..7165120 1 NC_013132.1 hypothetical protein 7165120 8361789 Cpin_5612 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125239.1 7164320 D 485918 CDS YP_003125240.1 256424587 8361790 complement(7165123..7165872) 1 NC_013132.1 PFAM: protein of unknown function DUF434; KEGG: sun:SUN_0694 hypothetical protein; hypothetical protein 7165872 8361790 Cpin_5613 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125240.1 7165123 R 485918 CDS YP_003125241.1 256424588 8361791 7166036..7166500 1 NC_013132.1 hypothetical protein 7166500 8361791 Cpin_5614 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125241.1 7166036 D 485918 CDS YP_003125242.1 256424589 8361792 complement(7166510..7167388) 1 NC_013132.1 PFAM: NmrA family protein; KEGG: bba:Bd3174 nucleoside-diphosphate- sugar epimerase; NmrA family protein 7167388 8361792 Cpin_5615 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003125242.1 7166510 R 485918 CDS YP_003125243.1 256424590 8361793 complement(7167487..7168407) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 7168407 8361793 Cpin_5616 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125243.1 7167487 R 485918 CDS YP_003125244.1 256424591 8361794 complement(7168466..7169191) 1 NC_013132.1 TIGRFAM: lycopene cyclase domain protein; lycopene cyclase domain-containing protein 7169191 8361794 Cpin_5617 Chitinophaga pinensis DSM 2588 lycopene cyclase domain-containing protein YP_003125244.1 7168466 R 485918 CDS YP_003125245.1 256424592 8361795 complement(7169193..7169669) 1 NC_013132.1 PFAM: fatty acid hydroxylase; KEGG: eli:ELI_03325 beta-carotene hydroxylase; fatty acid hydroxylase 7169669 8361795 Cpin_5618 Chitinophaga pinensis DSM 2588 fatty acid hydroxylase YP_003125245.1 7169193 R 485918 CDS YP_003125246.1 256424593 8361796 complement(7169704..7170531) 1 NC_013132.1 PFAM: squalene/phytoene synthase; KEGG: cvi:CV_2978 geranylgeranyl-diphosphate geranylgeranyltransferase; squalene/phytoene synthase 7170531 8361796 Cpin_5619 Chitinophaga pinensis DSM 2588 squalene/phytoene synthase YP_003125246.1 7169704 R 485918 CDS YP_003125247.1 256424594 8361797 complement(7170515..7172008) 1 NC_013132.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_0895 phytoene desaturase; phytoene desaturase 7172008 8361797 Cpin_5620 Chitinophaga pinensis DSM 2588 phytoene desaturase YP_003125247.1 7170515 R 485918 CDS YP_003125248.1 256424595 8361798 7172288..7173172 1 NC_013132.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: mxa:MXAN_0904 B12 binding domain/transcriptional regulator, MerR family; MerR family transcriptional regulator 7173172 8361798 Cpin_5621 Chitinophaga pinensis DSM 2588 MerR family transcriptional regulator YP_003125248.1 7172288 D 485918 CDS YP_003125249.1 256424596 8361799 complement(7173295..7174266) 1 NC_013132.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bba:Bd0305 quinone oxidoreductase; NAD(P)H quinone oxidoreductase 7174266 8361799 Cpin_5622 Chitinophaga pinensis DSM 2588 NAD(P)H quinone oxidoreductase YP_003125249.1 7173295 R 485918 CDS YP_003125250.1 256424597 8361800 complement(7174302..7174763) 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rlt:Rleg2_1831 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 7174763 8361800 Cpin_5623 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003125250.1 7174302 R 485918 CDS YP_003125251.1 256424598 8361803 7175963..7176820 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator 7176820 8361803 Cpin_5626 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125251.1 7175963 D 485918 CDS YP_003125252.1 256424599 8361804 7176903..7177130 1 NC_013132.1 KEGG: bpt:Bpet3466 hypothetical protein; hypothetical protein 7177130 8361804 Cpin_5627 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125252.1 7176903 D 485918 CDS YP_003125253.1 256424600 8361805 7177143..7178042 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bps:BPSS0919 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 7178042 8361805 Cpin_5628 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003125253.1 7177143 D 485918 CDS YP_003125254.1 256424601 8361806 7178121..7178717 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pap:PSPA7_4312 short chain dehydrogenase; short chain dehydrogenase 7178717 8361806 Cpin_5629 Chitinophaga pinensis DSM 2588 short chain dehydrogenase YP_003125254.1 7178121 D 485918 CDS YP_003125255.1 256424602 8361807 complement(7178807..7179697) 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bxe:Bxe_B0546 epimerase/dehydratase; NAD-dependent epimerase/dehydratase 7179697 8361807 Cpin_5630 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003125255.1 7178807 R 485918 CDS YP_003125256.1 256424603 8361808 7179850..7180443 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 7180443 8361808 Cpin_5631 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125256.1 7179850 D 485918 CDS YP_003125257.1 256424604 8361809 7180582..7182732 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2651 alpha-1,2-mannosidase family protein; alpha-1,2-mannosidase 7182732 8361809 Cpin_5632 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003125257.1 7180582 D 485918 CDS YP_003125258.1 256424605 8361810 complement(7182791..7183231) 1 NC_013132.1 PFAM: protein of unknown function DUF179; KEGG: pmr:PMI0339 hypothetical protein; hypothetical protein 7183231 8361810 Cpin_5633 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125258.1 7182791 R 485918 CDS YP_003125259.1 256424606 8361811 7183536..7184741 1 NC_013132.1 KEGG: aba:Acid345_1726 hypothetical protein; hypothetical protein 7184741 8361811 Cpin_5634 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125259.1 7183536 D 485918 CDS YP_003125260.1 256424607 8361812 complement(7184900..7185748) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_6279 AraC family transcriptional regulator; AraC family transcriptional regulator 7185748 8361812 Cpin_5635 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125260.1 7184900 R 485918 CDS YP_003125261.1 256424608 8361813 complement(7185778..7186260) 1 NC_013132.1 KEGG: bvi:Bcep1808_4925 hypothetical protein; hypothetical protein 7186260 8361813 Cpin_5636 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125261.1 7185778 R 485918 CDS YP_003125262.1 256424609 8361814 7186452..7187021 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 7187021 8361814 Cpin_5637 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125262.1 7186452 D 485918 CDS YP_003125263.1 256424610 8361815 7187110..7188384 1 NC_013132.1 KEGG: ilo:IL0337 adenylosuccinate synthase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase; adenylosuccinate synthetase 7188384 8361815 Cpin_5638 Chitinophaga pinensis DSM 2588 adenylosuccinate synthetase YP_003125263.1 7187110 D 485918 CDS YP_003125264.1 256424611 8361816 7188462..7189541 1 NC_013132.1 hypothetical protein 7189541 8361816 Cpin_5639 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125264.1 7188462 D 485918 CDS YP_003125265.1 256424612 8361817 7189707..7191569 1 NC_013132.1 KEGG: viral A-type inclusion protein; K02331 DNA polymerase phi subunit; hypothetical protein 7191569 8361817 Cpin_5640 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125265.1 7189707 D 485918 CDS YP_003125266.1 256424613 8361818 complement(7191681..7193684) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7193684 8361818 Cpin_5641 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125266.1 7191681 R 485918 CDS YP_003125267.1 256424614 8361819 complement(7193894..7195516) 1 NC_013132.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rlt:Rleg2_1908 alpha amylase catalytic region; alpha amylase 7195516 8361819 Cpin_5642 Chitinophaga pinensis DSM 2588 alpha amylase YP_003125267.1 7193894 R 485918 CDS YP_003125268.1 256424615 8361820 complement(7195574..7197172) 1 NC_013132.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; symporter YidK 7197172 8361820 Cpin_5643 Chitinophaga pinensis DSM 2588 symporter YidK YP_003125268.1 7195574 R 485918 CDS YP_003125269.1 256424616 8361821 complement(7197177..7198235) 1 NC_013132.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_B3939 GntR family transcriptional regulator; GntR family transcriptional regulator 7198235 8361821 Cpin_5644 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003125269.1 7197177 R 485918 CDS YP_003125270.1 256424617 8361822 complement(7198235..7200415) 1 NC_013132.1 PFAM: glycoside hydrolase clan GH-D; KEGG: sus:Acid_0933 glycoside hydrolase, clan GH-D; glycoside hydrolase clan GH-D 7200415 8361822 Cpin_5645 Chitinophaga pinensis DSM 2588 glycoside hydrolase clan GH-D YP_003125270.1 7198235 R 485918 CDS YP_003125271.1 256424618 8361823 complement(7200438..7202438) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7202438 8361823 Cpin_5646 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125271.1 7200438 R 485918 CDS YP_003125272.1 256424619 8361824 complement(7202499..7204061) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 7204061 8361824 Cpin_5647 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125272.1 7202499 R 485918 CDS YP_003125273.1 256424620 8361825 complement(7204082..7207207) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7207207 8361825 Cpin_5648 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125273.1 7204082 R 485918 CDS YP_003125274.1 256424621 8361826 7207605..7208219 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein; Crp/Fnr family transcriptional regulator 7208219 8361826 Cpin_5649 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125274.1 7207605 D 485918 CDS YP_003125275.1 256424622 8361827 7208285..7208689 1 NC_013132.1 KEGG: scl:sce6646 hypothetical protein; hypothetical protein 7208689 8361827 Cpin_5650 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125275.1 7208285 D 485918 CDS YP_003125276.1 256424623 8361828 7208679..7209005 1 NC_013132.1 hypothetical protein 7209005 8361828 Cpin_5651 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125276.1 7208679 D 485918 CDS YP_003125277.1 256424624 8361829 7209082..7209855 1 NC_013132.1 KEGG: aba:Acid345_2425 hypothetical protein; hypothetical protein 7209855 8361829 Cpin_5652 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125277.1 7209082 D 485918 CDS YP_003125278.1 256424625 8361830 complement(7210119..7210877) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr4183 oxidoreductase; short-chain dehydrogenase/reductase SDR 7210877 8361830 Cpin_5653 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125278.1 7210119 R 485918 CDS YP_003125279.1 256424626 8361834 complement(7211981..7212220) 1 NC_013132.1 hypothetical protein 7212220 8361834 Cpin_5654 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125279.1 7211981 R 485918 CDS YP_003125280.1 256424627 8361835 7212706..7214298 1 NC_013132.1 hypothetical protein 7214298 8361835 Cpin_5655 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125280.1 7212706 D 485918 CDS YP_003125281.1 256424628 8361836 7214295..7215389 1 NC_013132.1 KEGG: pca:Pcar_2842 UDP-glucuronosyltransferase- like protein; hypothetical protein 7215389 8361836 Cpin_5656 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125281.1 7214295 D 485918 CDS YP_003125282.1 256424629 8361837 7215386..7216297 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: bid:Bind_1618 glycosyl transferase family protein; family 2 glycosyl transferase 7216297 8361837 Cpin_5657 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003125282.1 7215386 D 485918 CDS YP_003125283.1 256424630 8361838 7216431..7216973 1 NC_013132.1 KEGG: sfu:Sfum_1765 polysaccharide deacetylase; hypothetical protein 7216973 8361838 Cpin_5658 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125283.1 7216431 D 485918 CDS YP_003125284.1 256424631 8361839 7216999..7217730 1 NC_013132.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mch:Mchl_3513 metal dependent phosphohydrolase; metal dependent phosphohydrolase 7217730 8361839 Cpin_5659 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003125284.1 7216999 D 485918 CDS YP_003125285.1 256424632 8361840 7217723..7218232 1 NC_013132.1 KEGG: psp:PSPPH_4306 hypothetical protein; hypothetical protein 7218232 8361840 Cpin_5660 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125285.1 7217723 D 485918 CDS YP_003125286.1 256424633 8361841 7218516..7219226 1 NC_013132.1 hypothetical protein 7219226 8361841 Cpin_5661 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125286.1 7218516 D 485918 CDS YP_003125287.1 256424634 8361843 complement(7220238..7223801) 1 NC_013132.1 PFAM: Ricin B lectin; alpha-L-rhamnosidase; SMART: Ricin B lectin; beta and gamma crystallin; KEGG: sus:Acid_3742 alpha-L-rhamnosidase; Ricin B lectin 7223801 8361843 Cpin_5663 Chitinophaga pinensis DSM 2588 Ricin B lectin YP_003125287.1 7220238 R 485918 CDS YP_003125288.1 256424635 8361844 complement(7224287..7225204) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 7225204 8361844 Cpin_5664 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125288.1 7224287 R 485918 CDS YP_003125289.1 256424636 8361845 complement(7225281..7226054) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_6333 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 7226054 8361845 Cpin_5665 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125289.1 7225281 R 485918 CDS YP_003125290.1 256424637 8361846 complement(7226261..7228003) 1 NC_013132.1 PFAM: endoribonuclease L-PSP; KEGG: mxa:MXAN_0100 peptidase, M28D (aminopeptidase ES-62) subfamily; endoribonuclease L-PSP 7228003 8361846 Cpin_5666 Chitinophaga pinensis DSM 2588 endoribonuclease L-PSP YP_003125290.1 7226261 R 485918 CDS YP_003125291.1 256424638 8361847 complement(7227987..7228952) 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A1376 methyl parathion hydrolase; beta-lactamase domain-containing protein 7228952 8361847 Cpin_5667 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003125291.1 7227987 R 485918 CDS YP_003125292.1 256424639 8361848 7229149..7229508 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: pca:Pcar_1088 MarR family transcriptional regulator; HxlR family transcriptional regulator 7229508 8361848 Cpin_5668 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003125292.1 7229149 D 485918 CDS YP_003125293.1 256424640 8361849 7229572..7230570 1 NC_013132.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: net:Neut_1304 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 7230570 8361849 Cpin_5669 Chitinophaga pinensis DSM 2588 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_003125293.1 7229572 D 485918 CDS YP_003125294.1 256424641 8361850 7230966..7231637 1 NC_013132.1 PFAM: YceI family protein; KEGG: scl:sce0162 hypothetical protein; hypothetical protein 7231637 8361850 Cpin_5670 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125294.1 7230966 D 485918 CDS YP_003125295.1 256424642 8361851 complement(7231997..7232632) 1 NC_013132.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mca:MCA2738 hexulose-6-phosphate synthase/SIS domain-containing protein; Orotidine 5'-phosphate decarboxylase 7232632 8361851 Cpin_5671 Chitinophaga pinensis DSM 2588 Orotidine 5'-phosphate decarboxylase YP_003125295.1 7231997 R 485918 CDS YP_003125296.1 256424643 8361852 complement(7232655..7233239) 1 NC_013132.1 TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: bsu:BSU03450 6-phospho-3-hexuloisomerase (phi); 6-phospho 3-hexuloisomerase 7233239 8361852 Cpin_5672 Chitinophaga pinensis DSM 2588 6-phospho 3-hexuloisomerase YP_003125296.1 7232655 R 485918 CDS YP_003125297.1 256424644 8361853 7233421..7234284 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vsp:VS_II1368 transcriptional regulator, AraC family; AraC family transcriptional regulator 7234284 8361853 Cpin_5673 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125297.1 7233421 D 485918 CDS YP_003125298.1 256424645 8361854 7234467..7235744 1 NC_013132.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: mxa:MXAN_2791 protease B; Ricin B lectin 7235744 8361854 Cpin_5674 Chitinophaga pinensis DSM 2588 Ricin B lectin YP_003125298.1 7234467 D 485918 CDS YP_003125299.1 256424646 8361855 complement(7235819..7238188) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 7238188 8361855 Cpin_5675 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125299.1 7235819 R 485918 CDS YP_003125300.1 256424647 8361856 complement(7238323..7239387) 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: eca:ECA0115 fatty acid desaturase; fatty acid desaturase 7239387 8361856 Cpin_5676 Chitinophaga pinensis DSM 2588 fatty acid desaturase YP_003125300.1 7238323 R 485918 CDS YP_003125301.1 256424648 8361857 complement(7239377..7240474) 1 NC_013132.1 PFAM: fatty acid desaturase; KEGG: cvi:CV_1644 linoleoyl-CoA desaturase; linoleoyl-CoA desaturase 7240474 8361857 Cpin_5677 Chitinophaga pinensis DSM 2588 linoleoyl-CoA desaturase YP_003125301.1 7239377 R 485918 CDS YP_003125302.1 256424649 8361858 complement(7240708..7242951) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: ppd:Ppro_3009 hypothetical protein; signal transduction histidine kinase 7242951 8361858 Cpin_5678 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003125302.1 7240708 R 485918 CDS YP_003125303.1 256424650 8361859 7243177..7244712 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: saz:Sama_3624 protease; PKD domain-containing protein 7244712 8361859 Cpin_5679 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003125303.1 7243177 D 485918 CDS YP_003125304.1 256424651 8361860 7245430..7246710 1 NC_013132.1 PFAM: epoxide hydrolase domain protein; alpha/beta hydrolase; KEGG: rle:pRL90316 hydrolase; epoxide hydrolase domain-containing protein 7246710 8361860 Cpin_5680 Chitinophaga pinensis DSM 2588 epoxide hydrolase domain-containing protein YP_003125304.1 7245430 D 485918 CDS YP_003125305.1 256424652 8361861 complement(7246811..7249171) 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE0549 TonB-dependent receptor protein; TonB-dependent siderophore receptor 7249171 8361861 Cpin_5681 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003125305.1 7246811 R 485918 CDS YP_003125306.1 256424653 8361862 complement(7249552..7251234) 1 NC_013132.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: mfa:Mfla_0617 SufS subfamily cysteine desulfurase; SufS subfamily cysteine desulfurase 7251234 8361862 Cpin_5682 Chitinophaga pinensis DSM 2588 SufS subfamily cysteine desulfurase YP_003125306.1 7249552 R 485918 CDS YP_003125307.1 256424654 8361863 complement(7251218..7252144) 1 NC_013132.1 KEGG: bid:Bind_1233 hypothetical protein; hypothetical protein 7252144 8361863 Cpin_5683 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125307.1 7251218 R 485918 CDS YP_003125308.1 256424655 8361864 complement(7252394..7253434) 1 NC_013132.1 KEGG: sml:Smlt1824 hypothetical protein; hypothetical protein 7253434 8361864 Cpin_5684 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125308.1 7252394 R 485918 CDS YP_003125309.1 256424656 8361865 complement(7253567..7255888) 1 NC_013132.1 PFAM: TonB-dependent receptor; Heavy metal transport/detoxification protein; KEGG: mfa:Mfla_1905 TonB-dependent receptor; TonB-dependent receptor 7255888 8361865 Cpin_5685 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125309.1 7253567 R 485918 CDS YP_003125310.1 256424657 8361866 complement(7255989..7256378) 1 NC_013132.1 hypothetical protein 7256378 8361866 Cpin_5686 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125310.1 7255989 R 485918 CDS YP_003125311.1 256424658 8361867 complement(7256540..7256914) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: rpa:RPA3222 MarR family transcriptional regulator; HxlR family transcriptional regulator 7256914 8361867 Cpin_5687 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003125311.1 7256540 R 485918 CDS YP_003125312.1 256424659 8361868 7256989..7257954 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0085 norsolorinic acid reductase; aldo/keto reductase 7257954 8361868 Cpin_5688 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003125312.1 7256989 D 485918 CDS YP_003125313.1 256424660 8361869 7258057..7258596 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH2083 transposase (18); bleomycin resistance protein 7258596 8361869 Cpin_5689 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003125313.1 7258057 D 485918 CDS YP_003125314.1 256424661 8361870 7258669..7260252 1 NC_013132.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: cco:CCC13826_1715 Na+/H+ antiporter; Na+/H+ antiporter 7260252 8361870 Cpin_5690 Chitinophaga pinensis DSM 2588 Na+/H+ antiporter YP_003125314.1 7258669 D 485918 CDS YP_003125315.1 256424662 8361871 complement(7260299..7261429) 1 NC_013132.1 PFAM: monooxygenase FAD-binding; KEGG: hypothetical protein; FAD-binding monooxygenase 7261429 8361871 Cpin_5691 Chitinophaga pinensis DSM 2588 FAD-binding monooxygenase YP_003125315.1 7260299 R 485918 CDS YP_003125316.1 256424663 8361872 7261516..7262472 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce1536 AraC family transcriptional regulator; AraC family transcriptional regulator 7262472 8361872 Cpin_5692 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125316.1 7261516 D 485918 CDS YP_003125317.1 256424664 8361873 complement(7262598..7262993) 1 NC_013132.1 PFAM: cupin; KEGG: msl:Msil_1146 cupin 2 conserved barrel domain protein; cupin 7262993 8361873 Cpin_5693 Chitinophaga pinensis DSM 2588 cupin YP_003125317.1 7262598 R 485918 CDS YP_003125318.1 256424665 8361874 complement(7263162..7263620) 1 NC_013132.1 KEGG: msu:MS1396 hypothetical protein; hypothetical protein 7263620 8361874 Cpin_5694 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125318.1 7263162 R 485918 CDS YP_003125319.1 256424666 8361875 complement(7263684..7264715) 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: cak:Caul_0434 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 7264715 8361875 Cpin_5695 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003125319.1 7263684 R 485918 CDS YP_003125320.1 256424667 8361876 complement(7264866..7265771) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 7265771 8361876 Cpin_5696 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125320.1 7264866 R 485918 CDS YP_003125321.1 256424668 8361877 7265936..7266106 1 NC_013132.1 hypothetical protein 7266106 8361877 Cpin_5697 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125321.1 7265936 D 485918 CDS YP_003125322.1 256424669 8361878 7266191..7266955 1 NC_013132.1 KEGG: bsu:BSU07690 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 7266955 8361878 Cpin_5698 Chitinophaga pinensis DSM 2588 methionine aminopeptidase YP_003125322.1 7266191 D 485918 CDS YP_003125323.1 256424670 8361879 complement(7267017..7267814) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bac:BamMC406_3582 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 7267814 8361879 Cpin_5699 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125323.1 7267017 R 485918 CDS YP_003125324.1 256424671 8361880 complement(7267851..7268660) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 7268660 8361880 Cpin_5700 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125324.1 7267851 R 485918 CDS YP_003125325.1 256424672 8361881 7269079..7269645 1 NC_013132.1 PFAM: NLI interacting domain protein; SMART: NLI interacting domain protein; KEGG: hne:HNE_2798 phosphoprotein phosphatase; NLI interacting domain-containing protein 7269645 8361881 Cpin_5701 Chitinophaga pinensis DSM 2588 NLI interacting domain-containing protein YP_003125325.1 7269079 D 485918 CDS YP_003125326.1 256424673 8361882 complement(7269623..7270582) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dde:Dde_1611 AraC family transcriptional regulator; AraC family transcriptional regulator 7270582 8361882 Cpin_5702 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125326.1 7269623 R 485918 CDS YP_003125327.1 256424674 8361884 complement(7270868..7271470) 1 NC_013132.1 KEGG: ADY3; Ady3p; hypothetical protein 7271470 8361884 Cpin_5704 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125327.1 7270868 R 485918 CDS YP_003125328.1 256424675 8361885 complement(7271666..7272160) 1 NC_013132.1 KEGG: hypothetical protein; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 7272160 8361885 Cpin_5705 Chitinophaga pinensis DSM 2588 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_003125328.1 7271666 R 485918 CDS YP_003125329.1 256424676 8361886 complement(7272166..7273284) 1 NC_013132.1 KEGG: dno:DNO_0078 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 7273284 8361886 Cpin_5706 Chitinophaga pinensis DSM 2588 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_003125329.1 7272166 R 485918 CDS YP_003125330.1 256424677 8361887 7273759..7276167 1 NC_013132.1 PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: pcr:Pcryo_0938 hypothetical protein; hypothetical protein 7276167 8361887 Cpin_5707 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125330.1 7273759 D 485918 CDS YP_003125331.1 256424678 8361888 complement(7276240..7278234) 1 NC_013132.1 PFAM: Hyaluronidase; KEGG: xcv:XCV4043 secreted protein; beta-N-acetylhexosaminidase 7278234 8361888 Cpin_5708 Chitinophaga pinensis DSM 2588 beta-N-acetylhexosaminidase YP_003125331.1 7276240 R 485918 CDS YP_003125332.1 256424679 8361889 7278442..7280610 1 NC_013132.1 KEGG: sde:Sde_0054 adenylyl cyclase class- 3/4/guanylyl cyclase; hypothetical protein 7280610 8361889 Cpin_5709 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125332.1 7278442 D 485918 CDS YP_003125333.1 256424680 8361890 7280789..7281268 1 NC_013132.1 KEGG: bsu:BSU18730 hypothetical protein; hypothetical protein 7281268 8361890 Cpin_5710 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125333.1 7280789 D 485918 CDS YP_003125334.1 256424681 8361891 7281272..7281499 1 NC_013132.1 SMART: helix-turn-helix domain protein; KEGG: bcb:BCB4264_A2209 transcription regulator, Cro/CI family -related protein; XRE family transcriptional regulator 7281499 8361891 Cpin_5711 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003125334.1 7281272 D 485918 CDS YP_003125335.1 256424682 8361892 complement(7281496..7281888) 1 NC_013132.1 KEGG: dac:Daci_4513 hypothetical protein; hypothetical protein 7281888 8361892 Cpin_5712 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125335.1 7281496 R 485918 CDS YP_003125336.1 256424683 8361893 7282158..7282619 1 NC_013132.1 PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_A4924 hypothetical protein; hypothetical protein 7282619 8361893 Cpin_5713 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125336.1 7282158 D 485918 CDS YP_003125337.1 256424684 8361894 7282736..7283014 1 NC_013132.1 KEGG: bbr:BB1232 hypothetical protein; hypothetical protein 7283014 8361894 Cpin_5714 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125337.1 7282736 D 485918 CDS YP_003125338.1 256424685 8361895 7283120..7283275 1 NC_013132.1 hypothetical protein 7283275 8361895 Cpin_5715 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125338.1 7283120 D 485918 CDS YP_003125339.1 256424686 8361896 7283322..7283549 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7283549 8361896 Cpin_5716 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125339.1 7283322 D 485918 CDS YP_003125340.1 256424687 8361897 7283557..7283709 1 NC_013132.1 hypothetical protein 7283709 8361897 Cpin_5717 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125340.1 7283557 D 485918 CDS YP_003125341.1 256424688 8361898 complement(7283697..7284083) 1 NC_013132.1 KEGG: reu:Reut_A0536 hypothetical protein; hypothetical protein 7284083 8361898 Cpin_5718 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125341.1 7283697 R 485918 CDS YP_003125342.1 256424689 8361900 complement(7285015..7285287) 1 NC_013132.1 KEGG: gur:Gura_3576 hypothetical protein; hypothetical protein 7285287 8361900 Cpin_5720 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125342.1 7285015 R 485918 CDS YP_003125343.1 256424690 8361901 complement(7285419..7285994) 1 NC_013132.1 hypothetical protein 7285994 8361901 Cpin_5721 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125343.1 7285419 R 485918 CDS YP_003125344.1 256424691 8361902 7286272..7286832 1 NC_013132.1 hypothetical protein 7286832 8361902 Cpin_5722 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125344.1 7286272 D 485918 CDS YP_003125345.1 256424692 8361903 7286862..7287425 1 NC_013132.1 KEGG: nar:Saro_3911 hypothetical protein; hypothetical protein 7287425 8361903 Cpin_5723 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125345.1 7286862 D 485918 CDS YP_003125346.1 256424693 8361904 7287478..7287990 1 NC_013132.1 KEGG: ada; methylated-DNA-(protein)-cysteine S- methyltransferase protein; K00567 methylated-DNA-; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 7287990 8361904 Cpin_5724 Chitinophaga pinensis DSM 2588 methylated-DNA--protein-cysteine methyltransferase YP_003125346.1 7287478 D 485918 CDS YP_003125347.1 256424694 8361905 complement(7288079..7288450) 1 NC_013132.1 hypothetical protein 7288450 8361905 Cpin_5725 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125347.1 7288079 R 485918 CDS YP_003125348.1 256424695 8361906 complement(7288677..7288799) 1 NC_013132.1 hypothetical protein 7288799 8361906 Cpin_5726 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125348.1 7288677 R 485918 CDS YP_003125349.1 256424696 8361907 7288910..7290046 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 7290046 8361907 Cpin_5727 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003125349.1 7288910 D 485918 CDS YP_003125350.1 256424697 8361908 complement(7290143..7291276) 1 NC_013132.1 KEGG: hsm:HSM_1739 hypothetical protein; hypothetical protein 7291276 8361908 Cpin_5728 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125350.1 7290143 R 485918 CDS YP_003125351.1 256424698 8361909 complement(7291286..7291933) 1 NC_013132.1 KEGG: sus:Acid_1798 hypothetical protein; hypothetical protein 7291933 8361909 Cpin_5729 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125351.1 7291286 R 485918 CDS YP_003125352.1 256424699 8361910 complement(7292138..7293055) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 7293055 8361910 Cpin_5730 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125352.1 7292138 R 485918 CDS YP_003125353.1 256424700 8361911 complement(7293081..7293821) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL2941 short-chain dehydrogenase/oxidoreductase; short-chain dehydrogenase/reductase SDR 7293821 8361911 Cpin_5731 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125353.1 7293081 R 485918 CDS YP_003125354.1 256424701 8361912 complement(7293920..7294174) 1 NC_013132.1 KEGG: reh:H16_A1662 hypothetical protein; hypothetical protein 7294174 8361912 Cpin_5732 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125354.1 7293920 R 485918 CDS YP_003125355.1 256424702 8361913 7294331..7295380 1 NC_013132.1 KEGG: mxa:MXAN_5269 S1D (lysyl endopeptidase) subfamily C-terminal domain protein; S1D (lysyl endopeptidase) subfamily C-terminal domain-containing protein 7295380 8361913 Cpin_5733 Chitinophaga pinensis DSM 2588 S1D (lysyl endopeptidase) subfamily C-terminal domain-containing protein YP_003125355.1 7294331 D 485918 CDS YP_003125356.1 256424703 8361914 complement(7295514..7296287) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: eli:ELI_12660 two-component response regulator; LytTR family two component transcriptional regulator 7296287 8361914 Cpin_5734 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003125356.1 7295514 R 485918 CDS YP_003125357.1 256424704 8361915 complement(7296238..7297275) 1 NC_013132.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: asa:ASA_1693 two-component system sensor histidine kinase; signal transduction histidine kinase LytS 7297275 8361915 Cpin_5735 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003125357.1 7296238 R 485918 CDS YP_003125358.1 256424705 8361916 complement(7297277..7297942) 1 NC_013132.1 KEGG: ccs:CCNA_00298 hypothetical protein; hypothetical protein 7297942 8361916 Cpin_5736 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125358.1 7297277 R 485918 CDS YP_003125359.1 256424706 8361917 7298188..7298823 1 NC_013132.1 PFAM: ABC transporter related; KEGG: acp:A2cp1_1559 ABC transporter related; ABC transporter 7298823 8361917 Cpin_5737 Chitinophaga pinensis DSM 2588 ABC transporter YP_003125359.1 7298188 D 485918 CDS YP_003125360.1 256424707 8361918 7298820..7299950 1 NC_013132.1 hypothetical protein 7299950 8361918 Cpin_5738 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125360.1 7298820 D 485918 CDS YP_003125361.1 256424708 8361919 7300047..7302614 1 NC_013132.1 PFAM: alpha-L-arabinofuranosidase; carbohydrate-binding CenC domain protein; KEGG: Os11g0131900; hypothetical protein; alpha-L-arabinofuranosidase 7302614 8361919 Cpin_5739 Chitinophaga pinensis DSM 2588 alpha-L-arabinofuranosidase YP_003125361.1 7300047 D 485918 CDS YP_003125362.1 256424709 8361920 7302619..7303959 1 NC_013132.1 PFAM: glycoside hydrolase clan GH-D; KEGG: bha:BH1870 hypothetical protein; glycoside hydrolase clan GH-D 7303959 8361920 Cpin_5740 Chitinophaga pinensis DSM 2588 glycoside hydrolase clan GH-D YP_003125362.1 7302619 D 485918 CDS YP_003125363.1 256424710 8361921 complement(7303970..7304857) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 7304857 8361921 Cpin_5741 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125363.1 7303970 R 485918 CDS YP_003125364.1 256424711 8361922 7305084..7306346 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7306346 8361922 Cpin_5742 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125364.1 7305084 D 485918 CDS YP_003125365.1 256424712 8361923 complement(7306427..7307452) 1 NC_013132.1 TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: pmr:PMI2505 transcriptional regulator; cytidyltransferase-related domain-containing protein 7307452 8361923 Cpin_5743 Chitinophaga pinensis DSM 2588 cytidyltransferase-related domain-containing protein YP_003125365.1 7306427 R 485918 CDS YP_003125366.1 256424713 8361924 complement(7307445..7308074) 1 NC_013132.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: spe:Spro_1283 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 7308074 8361924 Cpin_5744 Chitinophaga pinensis DSM 2588 nicotinamide mononucleotide transporter PnuC YP_003125366.1 7307445 R 485918 CDS YP_003125367.1 256424714 8361925 complement(7308074..7310149) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: afr:AFE_3229 TonB-dependent receptor; TonB-dependent receptor 7310149 8361925 Cpin_5745 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125367.1 7308074 R 485918 CDS YP_003125368.1 256424715 8361926 7310284..7310919 1 NC_013132.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: hypothetical protein; Sel1 domain-containing protein repeat-containing protein 7310919 8361926 Cpin_5746 Chitinophaga pinensis DSM 2588 Sel1 domain-containing protein repeat-containing protein YP_003125368.1 7310284 D 485918 CDS YP_003125369.1 256424716 8361927 complement(7310916..7312169) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rlt:Rleg2_5176 GAF sensor signal transduction histidine kinase; GAF sensor signal transduction histidine kinase 7312169 8361927 Cpin_5747 Chitinophaga pinensis DSM 2588 GAF sensor signal transduction histidine kinase YP_003125369.1 7310916 R 485918 CDS YP_003125370.1 256424717 8361928 7312347..7314188 1 NC_013132.1 PFAM: glycoside hydrolase family 9; KEGG: aba:Acid345_0426 glycoside hydrolase, family 9; glycoside hydrolase 7314188 8361928 Cpin_5748 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125370.1 7312347 D 485918 CDS YP_003125371.1 256424718 8361929 complement(7314246..7315388) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 7315388 8361929 Cpin_5749 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003125371.1 7314246 R 485918 CDS YP_003125372.1 256424719 8361930 complement(7315576..7316001) 1 NC_013132.1 PFAM: Domain of unknown function DUF1801; KEGG: mmr:Mmar10_2216 hypothetical protein; hypothetical protein 7316001 8361930 Cpin_5750 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125372.1 7315576 R 485918 CDS YP_003125373.1 256424720 8361931 complement(7316036..7316812) 1 NC_013132.1 KEGG: afw:Anae109_3659 hypothetical protein; hypothetical protein 7316812 8361931 Cpin_5751 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125373.1 7316036 R 485918 CDS YP_003125374.1 256424721 8361932 complement(7316965..7318998) 1 NC_013132.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein; OmpA/MotB domain-containing protein 7318998 8361932 Cpin_5752 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003125374.1 7316965 R 485918 CDS YP_003125375.1 256424722 8361933 complement(7319037..7320014) 1 NC_013132.1 hypothetical protein 7320014 8361933 Cpin_5753 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125375.1 7319037 R 485918 CDS YP_003125376.1 256424723 8361934 complement(7320100..7330515) 1 NC_013132.1 TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: bcr:BCAH187_A1759 conserved repeat domain protein; hypothetical protein 7330515 8361934 Cpin_5754 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125376.1 7320100 R 485918 CDS YP_003125377.1 256424724 8361935 7331028..7331636 1 NC_013132.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; KEGG: tmz:Tmz1t_0474 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 7331636 8361935 Cpin_5755 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003125377.1 7331028 D 485918 CDS YP_003125378.1 256424725 8361936 7331777..7332166 1 NC_013132.1 KEGG: DNA repair-related protein; hypothetical protein 7332166 8361936 Cpin_5756 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125378.1 7331777 D 485918 CDS YP_003125379.1 256424726 8361937 7332182..7332757 1 NC_013132.1 hypothetical protein 7332757 8361937 Cpin_5757 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125379.1 7332182 D 485918 CDS YP_003125380.1 256424727 8361938 7332920..7333354 1 NC_013132.1 PFAM: DoxX family protein; KEGG: aba:Acid345_3719 DoxX; DoxX family protein 7333354 8361938 Cpin_5758 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003125380.1 7332920 D 485918 CDS YP_003125381.1 256424728 8361939 7333526..7334149 1 NC_013132.1 hypothetical protein 7334149 8361939 Cpin_5759 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125381.1 7333526 D 485918 CDS YP_003125382.1 256424729 8361940 7334152..7334367 1 NC_013132.1 SMART: helix-turn-helix domain protein; KEGG: bsu:BSU18740 hypothetical protein; XRE family transcriptional regulator 7334367 8361940 Cpin_5760 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003125382.1 7334152 D 485918 CDS YP_003125383.1 256424730 8361941 7334825..7335775 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bba:Bd1451 MarR family transcriptional regulator; MarR family transcriptional regulator 7335775 8361941 Cpin_5761 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003125383.1 7334825 D 485918 CDS YP_003125384.1 256424731 8361942 7335836..7336903 1 NC_013132.1 PFAM: saccharopine dehydrogenase; KEGG: pla:Plav_2027 saccharopine dehydrogenase; saccharopine dehydrogenase 7336903 8361942 Cpin_5762 Chitinophaga pinensis DSM 2588 saccharopine dehydrogenase YP_003125384.1 7335836 D 485918 CDS YP_003125385.1 256424732 8361943 complement(7336951..7338144) 1 NC_013132.1 KEGG: pat:Patl_0575 hypothetical protein; hypothetical protein 7338144 8361943 Cpin_5763 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125385.1 7336951 R 485918 CDS YP_003125386.1 256424733 8361944 complement(7338170..7338397) 1 NC_013132.1 KEGG: sde:Sde_1565 arginine decarboxylase; arginine decarboxylase 7338397 8361944 Cpin_5764 Chitinophaga pinensis DSM 2588 arginine decarboxylase YP_003125386.1 7338170 R 485918 CDS YP_003125387.1 256424734 8361945 complement(7338400..7339347) 1 NC_013132.1 PFAM: ApbE family lipoprotein; KEGG: tgr:Tgr7_0552 ApbE family lipoprotein; ApbE family lipoprotein 7339347 8361945 Cpin_5765 Chitinophaga pinensis DSM 2588 ApbE family lipoprotein YP_003125387.1 7338400 R 485918 CDS YP_003125388.1 256424735 8361946 complement(7339331..7339780) 1 NC_013132.1 KEGG: cps:CPS_2790 electron transfer protein; hypothetical protein 7339780 8361946 Cpin_5766 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125388.1 7339331 R 485918 CDS YP_003125389.1 256424736 8361947 complement(7339917..7342052) 1 NC_013132.1 KEGG: xcv:XCV2800 alpha-glucosidase; alpha-glucosidase 7342052 8361947 Cpin_5767 Chitinophaga pinensis DSM 2588 alpha-glucosidase YP_003125389.1 7339917 R 485918 CDS YP_003125390.1 256424737 8361948 complement(7342238..7342567) 1 NC_013132.1 KEGG: bpy:Bphyt_5447 hypothetical protein; hypothetical protein 7342567 8361948 Cpin_5768 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125390.1 7342238 R 485918 CDS YP_003125391.1 256424738 8361949 7342684..7344291 1 NC_013132.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rpe:RPE_4865 alpha amylase, catalytic region; alpha amylase 7344291 8361949 Cpin_5769 Chitinophaga pinensis DSM 2588 alpha amylase YP_003125391.1 7342684 D 485918 CDS YP_003125392.1 256424739 8361950 complement(7344429..7344989) 1 NC_013132.1 KEGG: eca:ECA3329 acetyltransferase; hypothetical protein 7344989 8361950 Cpin_5770 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125392.1 7344429 R 485918 CDS YP_003125393.1 256424740 8361951 7345243..7346085 1 NC_013132.1 PFAM: UspA domain protein; KEGG: uspA; UspA-related nucleotide-binding protein; UspA domain-containing protein 7346085 8361951 Cpin_5771 Chitinophaga pinensis DSM 2588 UspA domain-containing protein YP_003125393.1 7345243 D 485918 CDS YP_003125394.1 256424741 8361952 complement(7346207..7346608) 1 NC_013132.1 KEGG: aba:Acid345_3575 hypothetical protein; hypothetical protein 7346608 8361952 Cpin_5772 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125394.1 7346207 R 485918 CDS YP_003125395.1 256424742 8361953 complement(7346710..7347621) 1 NC_013132.1 PFAM: methyltransferase type 12; methyltransferase type 11; Methionine biosynthesis MetW protein; KEGG: rpe:RPE_0811 methyltransferase type 11; type 12 methyltransferase 7347621 8361953 Cpin_5773 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003125395.1 7346710 R 485918 CDS YP_003125396.1 256424743 8361954 complement(7347727..7348269) 1 NC_013132.1 KEGG: aba:Acid345_2901 hypothetical protein; hypothetical protein 7348269 8361954 Cpin_5774 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125396.1 7347727 R 485918 CDS YP_003125397.1 256424744 8361956 7348617..7349201 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: cja:CJA_2207 membrane-associated phospholipid phosphatase; PA-phosphatase-like phosphoesterase 7349201 8361956 Cpin_5776 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003125397.1 7348617 D 485918 CDS YP_003125398.1 256424745 8361957 7349365..7349592 1 NC_013132.1 hypothetical protein 7349592 8361957 Cpin_5777 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125398.1 7349365 D 485918 CDS YP_003125399.1 256424746 8361958 complement(7349719..7350147) 1 NC_013132.1 KEGG: noc:Noc_0155 hypothetical protein; hypothetical protein 7350147 8361958 Cpin_5778 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125399.1 7349719 R 485918 CDS YP_003125400.1 256424747 8361959 complement(7350158..7350556) 1 NC_013132.1 PFAM: globin; KEGG: pla:Plav_2690 globin; globin 7350556 8361959 Cpin_5779 Chitinophaga pinensis DSM 2588 globin YP_003125400.1 7350158 R 485918 CDS YP_003125401.1 256424748 8361960 complement(7350565..7350978) 1 NC_013132.1 KEGG: mxa:MXAN_7466 hypothetical protein; hypothetical protein 7350978 8361960 Cpin_5780 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125401.1 7350565 R 485918 CDS YP_003125402.1 256424749 8361961 complement(7350987..7351247) 1 NC_013132.1 hypothetical protein 7351247 8361961 Cpin_5781 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125402.1 7350987 R 485918 CDS YP_003125403.1 256424750 8361962 complement(7351269..7352285) 1 NC_013132.1 PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome C class I; KEGG: bac:BamMC406_4624 cytochrome C oxidase mono- heme subunit/FixO; cytochrome C oxidase mono-heme subunit/FixO 7352285 8361962 Cpin_5782 Chitinophaga pinensis DSM 2588 cytochrome C oxidase mono-heme subunit/FixO YP_003125403.1 7351269 R 485918 CDS YP_003125404.1 256424751 8361963 complement(7352288..7354423) 1 NC_013132.1 PFAM: cytochrome C oxidase subunit I; KEGG: rfr:Rfer_4127 cytochrome C oxidase, subunit I; cytochrome C oxidase 7354423 8361963 Cpin_5783 Chitinophaga pinensis DSM 2588 cytochrome C oxidase YP_003125404.1 7352288 R 485918 CDS YP_003125405.1 256424752 8361964 7354740..7355174 1 NC_013132.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sus:Acid_3899 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 7355174 8361964 Cpin_5784 Chitinophaga pinensis DSM 2588 BadM/Rrf2 family transcriptional regulator YP_003125405.1 7354740 D 485918 CDS YP_003125406.1 256424753 8361965 7355308..7356246 1 NC_013132.1 PFAM: protein of unknown function DUF542 ScdA domain protein; hemerythrin HHE cation binding domain protein; KEGG: ppd:Ppro_3700 hypothetical protein; hypothetical protein 7356246 8361965 Cpin_5785 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125406.1 7355308 D 485918 CDS YP_003125407.1 256424754 8361966 7356296..7358542 1 NC_013132.1 KEGG: aba:Acid345_0364 nitric-oxide reductase; nitric-oxide reductase 7358542 8361966 Cpin_5786 Chitinophaga pinensis DSM 2588 nitric-oxide reductase YP_003125407.1 7356296 D 485918 CDS YP_003125408.1 256424755 8361967 complement(7358671..7359171) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_1426 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 7359171 8361967 Cpin_5787 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003125408.1 7358671 R 485918 CDS YP_003125409.1 256424756 8361968 7359286..7359597 1 NC_013132.1 hypothetical protein 7359597 8361968 Cpin_5788 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125409.1 7359286 D 485918 CDS YP_003125410.1 256424757 8361969 7359650..7360099 1 NC_013132.1 hypothetical protein 7360099 8361969 Cpin_5789 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125410.1 7359650 D 485918 CDS YP_003125411.1 256424758 8361970 complement(7360102..7360464) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bat:BAS3254 hypothetical protein; bleomycin resistance protein 7360464 8361970 Cpin_5790 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003125411.1 7360102 R 485918 CDS YP_003125412.1 256424759 8361971 complement(7360704..7361465) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ade:Adeh_0546 AraC family transcriptional regulator; AraC family transcriptional regulator 7361465 8361971 Cpin_5791 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125412.1 7360704 R 485918 CDS YP_003125413.1 256424760 8361972 complement(7361492..7361797) 1 NC_013132.1 KEGG: bba:Bd3290 hypothetical protein; hypothetical protein 7361797 8361972 Cpin_5792 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125413.1 7361492 R 485918 CDS YP_003125414.1 256424761 8361973 complement(7361800..7362264) 1 NC_013132.1 KEGG: mxa:MXAN_6226 hypothetical protein; hypothetical protein 7362264 8361973 Cpin_5793 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125414.1 7361800 R 485918 CDS YP_003125415.1 256424762 8361974 complement(7362330..7363235) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1629 AraC family transcription regulator; AraC family transcriptional regulator 7363235 8361974 Cpin_5794 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125415.1 7362330 R 485918 CDS YP_003125416.1 256424763 8361975 7363334..7364065 1 NC_013132.1 hypothetical protein 7364065 8361975 Cpin_5795 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125416.1 7363334 D 485918 CDS YP_003125417.1 256424764 8361976 7364108..7364554 1 NC_013132.1 KEGG: scl:sce6061 kinase; kinase 7364554 8361976 Cpin_5796 Chitinophaga pinensis DSM 2588 kinase YP_003125417.1 7364108 D 485918 CDS YP_003125418.1 256424765 8361977 7364544..7365311 1 NC_013132.1 PFAM: protein of unknown function DUF549; KEGG: hypothetical protein; tRNA(His)-5'-guanylyltransferase 7365311 8361977 Cpin_5797 Chitinophaga pinensis DSM 2588 tRNA(His)-5'-guanylyltransferase YP_003125418.1 7364544 D 485918 CDS YP_003125419.1 256424766 8361978 complement(7365379..7365672) 1 NC_013132.1 PFAM: calcium-binding protein; KEGG: rpi:Rpic_3389 signal transduction protein with EFhand domain; calcium-binding protein 7365672 8361978 Cpin_5798 Chitinophaga pinensis DSM 2588 calcium-binding protein YP_003125419.1 7365379 R 485918 CDS YP_003125420.1 256424767 8361979 complement(7366051..7367652) 1 NC_013132.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: ccv:CCV52592_0578 Na+/H+ antiporter; Na+/H+ antiporter 7367652 8361979 Cpin_5799 Chitinophaga pinensis DSM 2588 Na+/H+ antiporter YP_003125420.1 7366051 R 485918 CDS YP_003125421.1 256424768 8361980 7367829..7370375 1 NC_013132.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; GCN5-related N-acetyltransferase; KEGG: saz:Sama_1564 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 7370375 8361980 Cpin_5800 Chitinophaga pinensis DSM 2588 peptidyl-dipeptidase Dcp YP_003125421.1 7367829 D 485918 CDS YP_003125422.1 256424769 8361981 complement(7370447..7371958) 1 NC_013132.1 KEGG: sus:Acid_0470 Ig family protein; hypothetical protein 7371958 8361981 Cpin_5801 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125422.1 7370447 R 485918 CDS YP_003125423.1 256424770 8361982 complement(7372148..7372744) 1 NC_013132.1 KEGG: bcb:BCB4264_A3097 acetyltransferase, GNAT family; GNAT family acetyltransferase 7372744 8361982 Cpin_5802 Chitinophaga pinensis DSM 2588 GNAT family acetyltransferase YP_003125423.1 7372148 R 485918 CDS YP_003125424.1 256424771 8361983 7372852..7373523 1 NC_013132.1 KEGG: swp:swp_2724 hypothetical protein swp_2724; hypothetical protein 7373523 8361983 Cpin_5803 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125424.1 7372852 D 485918 CDS YP_003125425.1 256424772 8361984 complement(7373626..7376148) 1 NC_013132.1 KEGG: gme:Gmet_2877 hypothetical protein; hypothetical protein 7376148 8361984 Cpin_5804 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125425.1 7373626 R 485918 CDS YP_003125426.1 256424773 8361985 complement(7376333..7378048) 1 NC_013132.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: bja:blr1552 methylamine utilization protein precursor; cytochrome C peroxidase 7378048 8361985 Cpin_5805 Chitinophaga pinensis DSM 2588 cytochrome C peroxidase YP_003125426.1 7376333 R 485918 CDS YP_003125427.1 256424774 8361986 complement(7378054..7379619) 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: sse:Ssed_1747 hypothetical protein; metallophosphoesterase 7379619 8361986 Cpin_5806 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003125427.1 7378054 R 485918 CDS YP_003125428.1 256424775 8361987 complement(7379772..7380290) 1 NC_013132.1 PFAM: exonuclease RNase T and DNA polymerase III; KEGG: afw:Anae109_0222 hypothetical protein; exonuclease RNase T and DNA polymerase III 7380290 8361987 Cpin_5807 Chitinophaga pinensis DSM 2588 exonuclease RNase T and DNA polymerase III YP_003125428.1 7379772 R 485918 CDS YP_003125429.1 256424776 8361989 complement(7381006..7382043) 1 NC_013132.1 TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS; KEGG: scl:sce3738 dihydrouridine synthase TIM- barrel protein nifR3; hypothetical protein 7382043 8361989 Cpin_5809 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125429.1 7381006 R 485918 CDS YP_003125430.1 256424777 8361990 complement(7382578..7383906) 1 NC_013132.1 KEGG: nmu:Nmul_A0462 hypothetical protein; hypothetical protein 7383906 8361990 Cpin_5810 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125430.1 7382578 R 485918 CDS YP_003125431.1 256424778 8361991 complement(7384158..7385267) 1 NC_013132.1 KEGG: spe:Spro_1402 hypothetical protein; hypothetical protein 7385267 8361991 Cpin_5811 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125431.1 7384158 R 485918 CDS YP_003125432.1 256424779 8361992 7385413..7386891 1 NC_013132.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: mxa:MXAN_4081 ATP-dependent RNA helicase RhlE; DEAD/DEAH box helicase 7386891 8361992 Cpin_5812 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003125432.1 7385413 D 485918 CDS YP_003125433.1 256424780 8361993 7387078..7387809 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: bac:BamMC406_6291 TetR family transcriptional regulator; TetR family transcriptional regulator 7387809 8361993 Cpin_5813 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003125433.1 7387078 D 485918 CDS YP_003125434.1 256424781 8361994 7387881..7389152 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: ppd:Ppro_2206 major facilitator transporter; major facilitator superfamily protein 7389152 8361994 Cpin_5814 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003125434.1 7387881 D 485918 CDS YP_003125435.1 256424782 8361995 7389182..7389745 1 NC_013132.1 PFAM: isochorismatase hydrolase; KEGG: bav:BAV0718 isochorismatase-family hydrolase; isochorismatase hydrolase 7389745 8361995 Cpin_5815 Chitinophaga pinensis DSM 2588 isochorismatase hydrolase YP_003125435.1 7389182 D 485918 CDS YP_003125436.1 256424783 8361996 complement(7389751..7390482) 1 NC_013132.1 hypothetical protein 7390482 8361996 Cpin_5816 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125436.1 7389751 R 485918 CDS YP_003125437.1 256424784 8361997 complement(7390504..7391514) 1 NC_013132.1 KEGG: mxa:MXAN_0055 hypothetical protein; hypothetical protein 7391514 8361997 Cpin_5817 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125437.1 7390504 R 485918 CDS YP_003125438.1 256424785 8361998 7391564..7392475 1 NC_013132.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: eca:ECA2839 lipid kinase; diacylglycerol kinase catalytic subunit 7392475 8361998 Cpin_5818 Chitinophaga pinensis DSM 2588 diacylglycerol kinase catalytic subunit YP_003125438.1 7391564 D 485918 CDS YP_003125439.1 256424786 8361999 7392573..7395023 1 NC_013132.1 KEGG: predicted protein; hypothetical protein 7395023 8361999 Cpin_5819 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125439.1 7392573 D 485918 CDS YP_003125440.1 256424787 8362000 complement(7395305..7396129) 1 NC_013132.1 hypothetical protein 7396129 8362000 Cpin_5820 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125440.1 7395305 R 485918 CDS YP_003125441.1 256424788 8362001 complement(7396152..7396964) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bsu:BSU34100 alpha/beta hydrolase; alpha/beta hydrolase 7396964 8362001 Cpin_5821 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003125441.1 7396152 R 485918 CDS YP_003125442.1 256424789 8362002 7397201..7397905 1 NC_013132.1 KEGG: bat:BAS2138 hypothetical protein; hypothetical protein 7397905 8362002 Cpin_5822 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125442.1 7397201 D 485918 CDS YP_003125443.1 256424790 8362003 complement(7397986..7398765) 1 NC_013132.1 hypothetical protein 7398765 8362003 Cpin_5823 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125443.1 7397986 R 485918 CDS YP_003125444.1 256424791 8362004 complement(7399170..7399946) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region; LytTR family two component transcriptional regulator 7399946 8362004 Cpin_5824 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003125444.1 7399170 R 485918 CDS YP_003125445.1 256424792 8362005 complement(7399948..7400973) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 7400973 8362005 Cpin_5825 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003125445.1 7399948 R 485918 CDS YP_003125446.1 256424793 8362006 complement(7401120..7401887) 1 NC_013132.1 PFAM: protein of unknown function DUF1080; KEGG: ccs:CCNA_01698 cycloisomaltooligosaccharide glucanotransferase precursor; hypothetical protein 7401887 8362006 Cpin_5826 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125446.1 7401120 R 485918 CDS YP_003125447.1 256424794 8362007 7402081..7402710 1 NC_013132.1 hypothetical protein 7402710 8362007 Cpin_5827 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125447.1 7402081 D 485918 CDS YP_003125448.1 256424795 8362008 7402718..7403869 1 NC_013132.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; KEGG: scl:sce3841 AAA ATPases; ATPase AAA 7403869 8362008 Cpin_5828 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003125448.1 7402718 D 485918 CDS YP_003125449.1 256424796 8362009 7403866..7404570 1 NC_013132.1 hypothetical protein 7404570 8362009 Cpin_5829 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125449.1 7403866 D 485918 CDS YP_003125450.1 256424797 8362010 7404570..7407062 1 NC_013132.1 KEGG: scl:sce6069 hypothetical protein; hypothetical protein 7407062 8362010 Cpin_5830 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125450.1 7404570 D 485918 CDS YP_003125451.1 256424798 8362011 7407040..7409826 1 NC_013132.1 KEGG: mxa:MXAN_7008 hypothetical protein; cyclic nucleotide-binding protein 7409826 8362011 Cpin_5831 Chitinophaga pinensis DSM 2588 cyclic nucleotide-binding protein YP_003125451.1 7407040 D 485918 CDS YP_003125452.1 256424799 8362012 7409967..7410593 1 NC_013132.1 hypothetical protein 7410593 8362012 Cpin_5832 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125452.1 7409967 D 485918 CDS YP_003125453.1 256424800 8362013 7410601..7411923 1 NC_013132.1 PFAM: ABC-1 domain protein; KEGG: sde:Sde_3886 unusual protein kinase-like; ABC transporter 7411923 8362013 Cpin_5833 Chitinophaga pinensis DSM 2588 ABC transporter YP_003125453.1 7410601 D 485918 CDS YP_003125454.1 256424801 8362014 7412583..7413203 1 NC_013132.1 KEGG: cps:CPS_2654 PKD domain-containing protein; PKD domain-containing protein 7413203 8362014 Cpin_5834 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003125454.1 7412583 D 485918 CDS YP_003125455.1 256424802 8362015 7413320..7416421 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7416421 8362015 Cpin_5835 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125455.1 7413320 D 485918 CDS YP_003125456.1 256424803 8362016 7416434..7418296 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 7418296 8362016 Cpin_5836 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125456.1 7416434 D 485918 CDS YP_003125457.1 256424804 8362017 7418306..7419247 1 NC_013132.1 hypothetical protein 7419247 8362017 Cpin_5837 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125457.1 7418306 D 485918 CDS YP_003125458.1 256424805 8362018 complement(7419331..7419831) 1 NC_013132.1 KEGG: aba:Acid345_1594 hypothetical protein; hypothetical protein 7419831 8362018 Cpin_5838 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125458.1 7419331 R 485918 CDS YP_003125459.1 256424806 8362019 complement(7419937..7420479) 1 NC_013132.1 KEGG: lch:Lcho_4243 hypothetical protein; hypothetical protein 7420479 8362019 Cpin_5839 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125459.1 7419937 R 485918 CDS YP_003125460.1 256424807 8362020 complement(7420533..7421636) 1 NC_013132.1 PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family; ABC transporter 7421636 8362020 Cpin_5840 Chitinophaga pinensis DSM 2588 ABC transporter YP_003125460.1 7420533 R 485918 CDS YP_003125461.1 256424808 8362021 complement(7421807..7423570) 1 NC_013132.1 TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: rce:RC1_0570 signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 67K type 7423570 8362021 Cpin_5841 Chitinophaga pinensis DSM 2588 signal peptide peptidase SppA, 67K type YP_003125461.1 7421807 R 485918 CDS YP_003125462.1 256424809 8362022 7423662..7424153 1 NC_013132.1 KEGG: mlo:mll0786 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 7424153 8362022 Cpin_5842 Chitinophaga pinensis DSM 2588 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_003125462.1 7423662 D 485918 CDS YP_003125463.1 256424810 8362023 7424170..7424793 1 NC_013132.1 PFAM: deoxynucleoside kinase; KEGG: tbd:Tbd_2052 deoxynucleoside kinase; deoxynucleoside kinase 7424793 8362023 Cpin_5843 Chitinophaga pinensis DSM 2588 deoxynucleoside kinase YP_003125463.1 7424170 D 485918 CDS YP_003125464.1 256424811 8362024 7424958..7426439 1 NC_013132.1 PFAM: catalase domain protein; KEGG: bbr:BB4994 catalase; catalase 7426439 8362024 Cpin_5844 Chitinophaga pinensis DSM 2588 catalase YP_003125464.1 7424958 D 485918 CDS YP_003125465.1 256424812 8362025 complement(7426596..7427822) 1 NC_013132.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: hypothetical protein; K07007; hypothetical protein 7427822 8362025 Cpin_5845 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125465.1 7426596 R 485918 CDS YP_003125466.1 256424813 8362026 7427995..7430448 1 NC_013132.1 hypothetical protein 7430448 8362026 Cpin_5846 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125466.1 7427995 D 485918 CDS YP_003125467.1 256424814 8362027 7430545..7431696 1 NC_013132.1 PFAM: lipase class 3; KEGG: lipase; lipase class 3 7431696 8362027 Cpin_5847 Chitinophaga pinensis DSM 2588 lipase class 3 YP_003125467.1 7430545 D 485918 CDS YP_003125468.1 256424815 8362028 complement(7431716..7431862) 1 NC_013132.1 hypothetical protein 7431862 8362028 Cpin_5848 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125468.1 7431716 R 485918 CDS YP_003125469.1 256424816 8362029 complement(7432512..7433717) 1 NC_013132.1 KEGG: GH10488 gene product from transcript GH10488- RA; hypothetical protein 7433717 8362029 Cpin_5849 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125469.1 7432512 R 485918 CDS YP_003125470.1 256424817 8362030 complement(7433970..7434605) 1 NC_013132.1 KEGG: pag:PLES_13471 COG3179: predicted chitinase; chitinase 7434605 8362030 Cpin_5850 Chitinophaga pinensis DSM 2588 chitinase YP_003125470.1 7433970 R 485918 CDS YP_003125471.1 256424818 8362031 complement(7434672..7435985) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gur:Gura_2118 signal transduction histidine kinase; signal transduction histidine kinase 7435985 8362031 Cpin_5851 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003125471.1 7434672 R 485918 CDS YP_003125472.1 256424819 8362032 complement(7436042..7436944) 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 7436944 8362032 Cpin_5852 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125472.1 7436042 R 485918 CDS YP_003125473.1 256424820 8362033 complement(7437189..7437410) 1 NC_013132.1 KEGG: bpy:Bphyt_5916 hypothetical protein; hypothetical protein 7437410 8362033 Cpin_5853 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125473.1 7437189 R 485918 CDS YP_003125474.1 256424821 8362034 complement(7437437..7437820) 1 NC_013132.1 KEGG: aba:Acid345_0010 hypothetical protein; hypothetical protein 7437820 8362034 Cpin_5854 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125474.1 7437437 R 485918 CDS YP_003125475.1 256424822 8362036 complement(7438331..7440001) 1 NC_013132.1 hypothetical protein 7440001 8362036 Cpin_5856 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125475.1 7438331 R 485918 CDS YP_003125476.1 256424823 8362037 7440205..7440729 1 NC_013132.1 PFAM: protein of unknown function DUF892; KEGG: mlo:mll9661 hypothetical protein; hypothetical protein 7440729 8362037 Cpin_5857 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125476.1 7440205 D 485918 CDS YP_003125477.1 256424824 8362038 complement(7440859..7441329) 1 NC_013132.1 PFAM: PEBP family protein; KEGG: gur:Gura_1648 PEBP family protein; PEBP family protein 7441329 8362038 Cpin_5858 Chitinophaga pinensis DSM 2588 PEBP family protein YP_003125477.1 7440859 R 485918 CDS YP_003125478.1 256424825 8362039 complement(7441440..7441901) 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: gbm:Gbem_2817 NUDIX hydrolase; NUDIX hydrolase 7441901 8362039 Cpin_5859 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003125478.1 7441440 R 485918 CDS YP_003125479.1 256424826 8362040 7442079..7443434 1 NC_013132.1 KEGG: erythrocyte membrane protein; hypothetical protein 7443434 8362040 Cpin_5860 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125479.1 7442079 D 485918 CDS YP_003125480.1 256424827 8362041 complement(7443498..7445087) 1 NC_013132.1 hypothetical protein 7445087 8362041 Cpin_5861 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125480.1 7443498 R 485918 CDS YP_003125481.1 256424828 8362042 complement(7445269..7446192) 1 NC_013132.1 hypothetical protein 7446192 8362042 Cpin_5862 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125481.1 7445269 R 485918 CDS YP_003125482.1 256424829 8362043 complement(7446213..7455896) 1 NC_013132.1 PFAM: cadherin; NHL repeat containing protein; KEGG: ppw:PputW619_0675 pyrrolo-quinoline quinone; cadherin 7455896 8362043 Cpin_5863 Chitinophaga pinensis DSM 2588 cadherin YP_003125482.1 7446213 R 485918 CDS YP_003125483.1 256424830 8362044 complement(7455906..7457069) 1 NC_013132.1 KEGG: ABC transporter subunit; K01999 branched- chain amino acid transport system substrate-binding protein; branched-chain amino acid ABC transporter substrate-binding protein 7457069 8362044 Cpin_5864 Chitinophaga pinensis DSM 2588 branched-chain amino acid ABC transporter substrate-binding protein YP_003125483.1 7455906 R 485918 CDS YP_003125484.1 256424831 8362045 complement(7457076..7457666) 1 NC_013132.1 PFAM: hypothetical protein; KEGG: mno:Mnod_4880 tail collar domain protein; hypothetical protein 7457666 8362045 Cpin_5865 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125484.1 7457076 R 485918 CDS YP_003125485.1 256424832 8362046 complement(7457726..7458313) 1 NC_013132.1 PFAM: hypothetical protein; KEGG: mno:Mnod_4880 tail collar domain protein; hypothetical protein 7458313 8362046 Cpin_5866 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125485.1 7457726 R 485918 CDS YP_003125486.1 256424833 8362047 complement(7458330..7459523) 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: smt:Smal_3812 oxidoreductase domain protein; alpha-N-acetylgalactosaminidase 7459523 8362047 Cpin_5867 Chitinophaga pinensis DSM 2588 alpha-N-acetylgalactosaminidase YP_003125486.1 7458330 R 485918 CDS YP_003125487.1 256424834 8362048 7460229..7461212 1 NC_013132.1 PFAM: fatty acid desaturase; Sphingolipid delta4- desaturase DES; KEGG: msl:Msil_1351 fatty acid desaturase; fatty acid desaturase 7461212 8362048 Cpin_5868 Chitinophaga pinensis DSM 2588 fatty acid desaturase YP_003125487.1 7460229 D 485918 CDS YP_003125488.1 256424835 8362049 7461342..7462580 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 7462580 8362049 Cpin_5869 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003125488.1 7461342 D 485918 CDS YP_003125489.1 256424836 8362050 complement(7462799..7464748) 1 NC_013132.1 PFAM: heparinase II/III family protein; KEGG: rlt:Rleg2_5337 heparinase II/III family protein; heparinase II/III family protein 7464748 8362050 Cpin_5870 Chitinophaga pinensis DSM 2588 heparinase II/III family protein YP_003125489.1 7462799 R 485918 CDS YP_003125490.1 256424837 8362051 7464907..7465437 1 NC_013132.1 KEGG: similar to mical; hypothetical protein 7465437 8362051 Cpin_5871 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125490.1 7464907 D 485918 CDS YP_003125491.1 256424838 8362052 complement(7465487..7466632) 1 NC_013132.1 hypothetical protein 7466632 8362052 Cpin_5872 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125491.1 7465487 R 485918 CDS YP_003125492.1 256424839 8362053 complement(7466999..7467523) 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: scl:sce5623 SAM-dependent methyltransferase; type 11 methyltransferase 7467523 8362053 Cpin_5873 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003125492.1 7466999 R 485918 CDS YP_003125493.1 256424840 8362054 complement(7467556..7467753) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7467753 8362054 Cpin_5874 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125493.1 7467556 R 485918 CDS YP_003125494.1 256424841 8362055 complement(7467807..7468805) 1 NC_013132.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: amc:MADE_01969 alcohol dehydrogenase, zinc- containing; YhdH/YhfP family quinone oxidoreductase 7468805 8362055 Cpin_5875 Chitinophaga pinensis DSM 2588 YhdH/YhfP family quinone oxidoreductase YP_003125494.1 7467807 R 485918 CDS YP_003125495.1 256424842 8362056 7468919..7469257 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bha:BH0737 cinnamoyl ester hydrolase; HxlR family transcriptional regulator 7469257 8362056 Cpin_5876 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003125495.1 7468919 D 485918 CDS YP_003125496.1 256424843 8362057 complement(7469313..7470209) 1 NC_013132.1 hypothetical protein 7470209 8362057 Cpin_5877 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125496.1 7469313 R 485918 CDS YP_003125497.1 256424844 8362058 complement(7470623..7471303) 1 NC_013132.1 hypothetical protein 7471303 8362058 Cpin_5878 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125497.1 7470623 R 485918 CDS YP_003125498.1 256424845 8362059 complement(7471405..7472292) 1 NC_013132.1 PFAM: OmpA/MotB domain protein; KEGG: tbd:Tbd_2454 outer membrane protein; OmpA/MotB domain-containing protein 7472292 8362059 Cpin_5879 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003125498.1 7471405 R 485918 CDS YP_003125499.1 256424846 8362060 complement(7472433..7472648) 1 NC_013132.1 hypothetical protein 7472648 8362060 Cpin_5880 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125499.1 7472433 R 485918 CDS YP_003125500.1 256424847 8362062 7472921..7473481 1 NC_013132.1 KEGG: abo:ABO_0057 hypothetical protein; hypothetical protein 7473481 8362062 Cpin_5881 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125500.1 7472921 D 485918 CDS YP_003125501.1 256424848 8362063 7473576..7476056 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor; TonB-dependent receptor 7476056 8362063 Cpin_5882 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125501.1 7473576 D 485918 CDS YP_003125502.1 256424849 8362064 complement(7476051..7476707) 1 NC_013132.1 KEGG: hha:Hhal_1430 protein-L-isoaspartate O- methyltransferase; TIGRFAM: protein-L-isoaspartate O- methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O- methyltransferase; protein-L-isoaspartate O-methyltransferase 7476707 8362064 Cpin_5883 Chitinophaga pinensis DSM 2588 protein-L-isoaspartate O-methyltransferase YP_003125502.1 7476051 R 485918 CDS YP_003125503.1 256424850 8362065 7476907..7478631 1 NC_013132.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: bcr:BCAH187_A5064 phosphoglucomutase/phosphomannomutase family protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 7478631 8362065 Cpin_5884 Chitinophaga pinensis DSM 2588 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_003125503.1 7476907 D 485918 CDS YP_003125504.1 256424851 8362066 complement(7478711..7479208) 1 NC_013132.1 PFAM: phosphoribosyltransferase; KEGG: bcy:Bcer98_2540 pyrimidine regulatory protein PyrR; phosphoribosyltransferase 7479208 8362066 Cpin_5885 Chitinophaga pinensis DSM 2588 phosphoribosyltransferase YP_003125504.1 7478711 R 485918 CDS YP_003125505.1 256424852 8362067 7479328..7480650 1 NC_013132.1 KEGG: gbm:Gbem_2087 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein 7480650 8362067 Cpin_5886 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125505.1 7479328 D 485918 CDS YP_003125506.1 256424853 8362068 7480678..7481457 1 NC_013132.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: scl:sce0368 iron-sulfur protein, transmembrane protein; hypothetical protein 7481457 8362068 Cpin_5887 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125506.1 7480678 D 485918 CDS YP_003125507.1 256424854 8362069 7481523..7481942 1 NC_013132.1 KEGG: vco:VC0395_0865 hypothetical protein; hypothetical protein 7481942 8362069 Cpin_5888 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125507.1 7481523 D 485918 CDS YP_003125508.1 256424855 8362070 7481946..7482569 1 NC_013132.1 PFAM: Negative transcriptional regulator; KEGG: bha:BH0412 transcriptional repressor of sporulation and degradative enzyme production; FMN-binding negative transcriptional regulator 7482569 8362070 Cpin_5889 Chitinophaga pinensis DSM 2588 FMN-binding negative transcriptional regulator YP_003125508.1 7481946 D 485918 CDS YP_003125509.1 256424856 8362071 7482614..7483120 1 NC_013132.1 hypothetical protein 7483120 8362071 Cpin_5890 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125509.1 7482614 D 485918 CDS YP_003125510.1 256424857 8362072 7483309..7483869 1 NC_013132.1 hypothetical protein 7483869 8362072 Cpin_5891 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125510.1 7483309 D 485918 CDS YP_003125511.1 256424858 8362073 complement(7483929..7484984) 1 NC_013132.1 hypothetical protein 7484984 8362073 Cpin_5892 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125511.1 7483929 R 485918 CDS YP_003125512.1 256424859 8362074 complement(7485409..7486035) 1 NC_013132.1 hypothetical protein 7486035 8362074 Cpin_5893 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125512.1 7485409 R 485918 CDS YP_003125513.1 256424860 8362075 7486217..7488064 1 NC_013132.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: gsu:GSU0983 hypothetical protein; Rhs element Vgr protein 7488064 8362075 Cpin_5894 Chitinophaga pinensis DSM 2588 Rhs element Vgr protein YP_003125513.1 7486217 D 485918 CDS YP_003125514.1 256424861 8362076 7488079..7489476 1 NC_013132.1 KEGG: vfm:VFMJ11_B0048 hypothetical protein; hypothetical protein 7489476 8362076 Cpin_5895 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125514.1 7488079 D 485918 CDS YP_003125515.1 256424862 8362077 7489473..7489961 1 NC_013132.1 hypothetical protein 7489961 8362077 Cpin_5896 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125515.1 7489473 D 485918 CDS YP_003125516.1 256424863 8362078 7489968..7490750 1 NC_013132.1 hypothetical protein 7490750 8362078 Cpin_5897 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125516.1 7489968 D 485918 CDS YP_003125517.1 256424864 8362079 7490758..7494651 1 NC_013132.1 KEGG: abc:ACICU_03562 chitinase; chitinase 7494651 8362079 Cpin_5898 Chitinophaga pinensis DSM 2588 chitinase YP_003125517.1 7490758 D 485918 CDS YP_003125518.1 256424865 8362080 7494697..7495791 1 NC_013132.1 hypothetical protein 7495791 8362080 Cpin_5899 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125518.1 7494697 D 485918 CDS YP_003125519.1 256424866 8362081 complement(7495879..7496295) 1 NC_013132.1 hypothetical protein 7496295 8362081 Cpin_5900 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125519.1 7495879 R 485918 CDS YP_003125520.1 256424867 8362082 complement(7496297..7496680) 1 NC_013132.1 KEGG: aby:ABAYE1809 hypothetical protein; hypothetical protein 7496680 8362082 Cpin_5901 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125520.1 7496297 R 485918 CDS YP_003125521.1 256424868 8362083 complement(7496677..7497120) 1 NC_013132.1 hypothetical protein 7497120 8362083 Cpin_5902 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125521.1 7496677 R 485918 CDS YP_003125522.1 256424869 8362084 7497298..7498863 1 NC_013132.1 PFAM: glycoside hydrolase family 28; SMART: hypothetical protein; KEGG: sde:Sde_0953 glycoside hydrolase family protein; glycoside hydrolase 7498863 8362084 Cpin_5903 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125522.1 7497298 D 485918 CDS YP_003125523.1 256424870 8362085 7498988..7499581 1 NC_013132.1 KEGG: hch:HCH_04344 hypothetical protein; hypothetical protein 7499581 8362085 Cpin_5904 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125523.1 7498988 D 485918 CDS YP_003125524.1 256424871 8362086 7499600..7500526 1 NC_013132.1 PFAM: Domain of unknown function DUF1814; hypothetical protein 7500526 8362086 Cpin_5905 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125524.1 7499600 D 485918 CDS YP_003125525.1 256424872 8362087 7500744..7501424 1 NC_013132.1 PFAM: aspartyl/Asparaginyl beta-hydroxylase; KEGG: aba:Acid345_2739 aspartyl/asparaginyl beta- hydroxylase; aspartyl/Asparaginyl beta-hydroxylase 7501424 8362087 Cpin_5906 Chitinophaga pinensis DSM 2588 aspartyl/Asparaginyl beta-hydroxylase YP_003125525.1 7500744 D 485918 CDS YP_003125526.1 256424873 8362088 7501424..7502374 1 NC_013132.1 KEGG: aba:Acid345_2739 aspartyl/asparaginyl beta- hydroxylase; hypothetical protein 7502374 8362088 Cpin_5907 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125526.1 7501424 D 485918 CDS YP_003125527.1 256424874 8362089 7502379..7502942 1 NC_013132.1 PFAM: adenylylsulfate kinase; KEGG: scl:sce5751 sulfate adenylyltransferase; adenylylsulfate kinase 7502942 8362089 Cpin_5908 Chitinophaga pinensis DSM 2588 adenylylsulfate kinase YP_003125527.1 7502379 D 485918 CDS YP_003125528.1 256424875 8362090 complement(7502887..7503834) 1 NC_013132.1 hypothetical protein 7503834 8362090 Cpin_5909 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125528.1 7502887 R 485918 CDS YP_003125529.1 256424876 8362091 complement(7503902..7504372) 1 NC_013132.1 hypothetical protein 7504372 8362091 Cpin_5910 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125529.1 7503902 R 485918 CDS YP_003125530.1 256424877 8362092 7504524..7504658 1 NC_013132.1 hypothetical protein 7504658 8362092 Cpin_5911 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125530.1 7504524 D 485918 CDS YP_003125531.1 256424878 8362093 complement(7504675..7505547) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator 7505547 8362093 Cpin_5912 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125531.1 7504675 R 485918 CDS YP_003125532.1 256424879 8362094 complement(7505745..7506242) 1 NC_013132.1 PFAM: glycoside hydrolase family 24; KEGG: cvi:CV_0727 phage-related lysozyme; glycoside hydrolase 7506242 8362094 Cpin_5913 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125532.1 7505745 R 485918 CDS YP_003125533.1 256424880 8362095 7506917..7507783 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: vco:VC0395_0623 sensor protein UhpB; histidine kinase 7507783 8362095 Cpin_5914 Chitinophaga pinensis DSM 2588 histidine kinase YP_003125533.1 7506917 D 485918 CDS YP_003125534.1 256424881 8362096 7507767..7508390 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: vco:VC0395_A0896 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 7508390 8362096 Cpin_5915 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003125534.1 7507767 D 485918 CDS YP_003125535.1 256424882 8362097 7508476..7509897 1 NC_013132.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 7509897 8362097 Cpin_5916 Chitinophaga pinensis DSM 2588 (dimethylallyl)adenosine tRNA methylthiotransferase YP_003125535.1 7508476 D 485918 CDS YP_003125536.1 256424883 8362098 7509969..7511228 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dds:Ddes_1305 sigma54 specific transcriptional regulator, fis family; Fis family transcriptional regulator 7511228 8362098 Cpin_5917 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003125536.1 7509969 D 485918 CDS YP_003125537.1 256424884 8362099 7511271..7511786 1 NC_013132.1 KEGG: gme:Gmet_2299 lipoprotein; hypothetical protein 7511786 8362099 Cpin_5918 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125537.1 7511271 D 485918 CDS YP_003125538.1 256424885 8362100 7511834..7513117 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7513117 8362100 Cpin_5919 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125538.1 7511834 D 485918 CDS YP_003125539.1 256424886 8362101 7513128..7513475 1 NC_013132.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: ank:AnaeK_2334 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 7513475 8362101 Cpin_5920 Chitinophaga pinensis DSM 2588 preprotein translocase subunit SecG YP_003125539.1 7513128 D 485918 CDS YP_003125540.1 256424887 8362102 7513543..7514601 1 NC_013132.1 PFAM: aminodeoxychorismate lyase; KEGG: glo:Glov_2459 aminodeoxychorismate lyase; aminodeoxychorismate lyase 7514601 8362102 Cpin_5921 Chitinophaga pinensis DSM 2588 aminodeoxychorismate lyase YP_003125540.1 7513543 D 485918 CDS YP_003125541.1 256424888 8362103 7514615..7515586 1 NC_013132.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: ribonuclease BN; K07058; ribonuclease BN 7515586 8362103 Cpin_5922 Chitinophaga pinensis DSM 2588 ribonuclease BN YP_003125541.1 7514615 D 485918 CDS YP_003125542.1 256424889 8362104 7516198..7516752 1 NC_013132.1 KEGG: scl:sce6073 thiol-disulfide isomerase; thiol-disulfide isomerase 7516752 8362104 Cpin_5923 Chitinophaga pinensis DSM 2588 thiol-disulfide isomerase YP_003125542.1 7516198 D 485918 CDS YP_003125543.1 256424890 8362105 complement(7517084..7519597) 1 NC_013132.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: sus:Acid_1533 peptidase M14, carboxypeptidase A; peptidase M14 carboxypeptidase A 7519597 8362105 Cpin_5924 Chitinophaga pinensis DSM 2588 peptidase M14 carboxypeptidase A YP_003125543.1 7517084 R 485918 CDS YP_003125544.1 256424891 8362106 complement(7519673..7520077) 1 NC_013132.1 KEGG: hhe:HH0575 hypothetical protein; hypothetical protein 7520077 8362106 Cpin_5925 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125544.1 7519673 R 485918 CDS YP_003125545.1 256424892 8362107 complement(7520252..7523026) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_3441 TonB-dependent receptor; TonB-dependent receptor 7523026 8362107 Cpin_5926 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125545.1 7520252 R 485918 CDS YP_003125546.1 256424893 8362108 7523220..7524920 1 NC_013132.1 KEGG: stt:t3970 gamma-glutamyltranspeptidase periplasmic precursor; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 7524920 8362108 Cpin_5927 Chitinophaga pinensis DSM 2588 gamma-glutamyltransferase YP_003125546.1 7523220 D 485918 CDS YP_003125547.1 256424894 8362109 7524942..7525472 1 NC_013132.1 PFAM: protein of unknown function DUF1572; KEGG: aba:Acid345_4703 protein of unknown function DUF1572; hypothetical protein 7525472 8362109 Cpin_5928 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125547.1 7524942 D 485918 CDS YP_003125548.1 256424895 8362110 7525478..7525921 1 NC_013132.1 hypothetical protein 7525921 8362110 Cpin_5929 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125548.1 7525478 D 485918 CDS YP_003125549.1 256424896 8362111 7525929..7526975 1 NC_013132.1 PFAM: aminotransferase class I and II; KEGG: afr:AFE_3011 8-amino-7-oxononanoate synthase; class I and II aminotransferase 7526975 8362111 Cpin_5930 Chitinophaga pinensis DSM 2588 class I and II aminotransferase YP_003125549.1 7525929 D 485918 CDS YP_003125550.1 256424897 8362112 7526978..7527856 1 NC_013132.1 PFAM: GumN family protein; KEGG: ilo:IL0078 hypothetical protein; GumN family protein 7527856 8362112 Cpin_5931 Chitinophaga pinensis DSM 2588 GumN family protein YP_003125550.1 7526978 D 485918 CDS YP_003125551.1 256424898 8362113 7528072..7528962 1 NC_013132.1 PFAM: GumN family protein; KEGG: rlt:Rleg2_3662 GumN family protein; GumN family protein 7528962 8362113 Cpin_5932 Chitinophaga pinensis DSM 2588 GumN family protein YP_003125551.1 7528072 D 485918 CDS YP_003125552.1 256424899 8362114 7529170..7533954 1 NC_013132.1 PFAM: protein of unknown function DUF490; KEGG: bqu:BQ00410 hypothetical protein; hypothetical protein 7533954 8362114 Cpin_5933 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125552.1 7529170 D 485918 CDS YP_003125553.1 256424900 8362115 complement(7534231..7535433) 1 NC_013132.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: bha:BH1556 bifunctional 3,4-dihydroxy-2- butanone 4-phosphate synthase/GTP cyclohydrolase II protein; 3,4-dihydroxy-2-butanone 4-phosphate synthase 7535433 8362115 Cpin_5934 Chitinophaga pinensis DSM 2588 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_003125553.1 7534231 R 485918 CDS YP_003125554.1 256424901 8362116 7535805..7539098 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: xop:PXO_01318 TonB-dependent outer membrane receptor/Oar-like protein; TonB-dependent receptor plug 7539098 8362116 Cpin_5935 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125554.1 7535805 D 485918 CDS YP_003125555.1 256424902 8362117 7539308..7540186 1 NC_013132.1 hypothetical protein 7540186 8362117 Cpin_5936 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125555.1 7539308 D 485918 CDS YP_003125556.1 256424903 8362118 7540200..7541045 1 NC_013132.1 hypothetical protein 7541045 8362118 Cpin_5937 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125556.1 7540200 D 485918 CDS YP_003125557.1 256424904 8362119 7541215..7541922 1 NC_013132.1 KEGG: sus:Acid_3928 esterase; esterase 7541922 8362119 Cpin_5938 Chitinophaga pinensis DSM 2588 esterase YP_003125557.1 7541215 D 485918 CDS YP_003125558.1 256424905 8362120 7542004..7543125 1 NC_013132.1 KEGG: sus:Acid_3927 glutathione synthase/ribosomal protein S6 modification glutaminyl transferase-like protein; glutathione synthase/ribosomal protein S6 modification glutaminyl transferase-like protein 7543125 8362120 Cpin_5939 Chitinophaga pinensis DSM 2588 glutathione synthase/ribosomal protein S6 modification glutaminyl transferase-like protein YP_003125558.1 7542004 D 485918 CDS YP_003125559.1 256424906 8362121 7543376..7544476 1 NC_013132.1 ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase 7544476 8362121 Cpin_5940 Chitinophaga pinensis DSM 2588 carboxylate-amine ligase YP_003125559.1 7543376 D 485918 CDS YP_003125560.1 256424907 8362122 7544494..7545339 1 NC_013132.1 KEGG: scl:sce3772 hypothetical protein; GMP synthase 7545339 8362122 Cpin_5941 Chitinophaga pinensis DSM 2588 GMP synthase YP_003125560.1 7544494 D 485918 CDS YP_003125561.1 256424908 8362123 7545381..7546580 1 NC_013132.1 KEGG: sus:Acid_3924 hypothetical protein; hypothetical protein 7546580 8362123 Cpin_5942 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125561.1 7545381 D 485918 CDS YP_003125562.1 256424909 8362124 complement(7546575..7548206) 1 NC_013132.1 KEGG: sus:Acid_0979 xanthan lyase; xanthan lyase 7548206 8362124 Cpin_5943 Chitinophaga pinensis DSM 2588 xanthan lyase YP_003125562.1 7546575 R 485918 CDS YP_003125563.1 256424910 8362125 complement(7548362..7548670) 1 NC_013132.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: aba:Acid345_0203 UBA/ThiF-type NAD/FAD binding protein; rhodanese domain-containing protein 7548670 8362125 Cpin_5944 Chitinophaga pinensis DSM 2588 rhodanese domain-containing protein YP_003125563.1 7548362 R 485918 CDS YP_003125564.1 256424911 8362126 complement(7548728..7549549) 1 NC_013132.1 PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; KEGG: bha:BH2504 serine/threonine protein kinase; protein PASTA domain-containing protein 7549549 8362126 Cpin_5945 Chitinophaga pinensis DSM 2588 protein PASTA domain-containing protein YP_003125564.1 7548728 R 485918 CDS YP_003125565.1 256424912 8362127 complement(7549587..7550576) 1 NC_013132.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 7550576 ddl 8362127 ddl Chitinophaga pinensis DSM 2588 D-alanyl-alanine synthetase A YP_003125565.1 7549587 R 485918 CDS YP_003125566.1 256424913 8362128 complement(7550757..7551104) 1 NC_013132.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: afw:Anae109_1090 4Fe-4S ferredoxin iron- sulfur binding domain-containing protein; 4Fe-4S ferredoxin 7551104 8362128 Cpin_5947 Chitinophaga pinensis DSM 2588 4Fe-4S ferredoxin YP_003125566.1 7550757 R 485918 CDS YP_003125567.1 256424914 8362129 7551199..7552191 1 NC_013132.1 PFAM: acyl-CoA reductase; KEGG: hypothetical protein; acyl-CoA reductase 7552191 8362129 Cpin_5948 Chitinophaga pinensis DSM 2588 acyl-CoA reductase YP_003125567.1 7551199 D 485918 CDS YP_003125568.1 256424915 8362130 7552502..7554040 1 NC_013132.1 KEGG: cti:RALTA_B0169 periplasmic protease; contains two PDZ domain; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; HtrA2 peptidase 7554040 8362130 Cpin_5949 Chitinophaga pinensis DSM 2588 HtrA2 peptidase YP_003125568.1 7552502 D 485918 CDS YP_003125569.1 256424916 8362131 complement(7554174..7554935) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: ban:BA5691 response regulator LytR; LytTR family two component transcriptional regulator 7554935 8362131 Cpin_5950 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003125569.1 7554174 R 485918 CDS YP_003125570.1 256424917 8362132 complement(7554932..7557859) 1 NC_013132.1 PFAM: histidine kinase internal region; two component regulator propeller; KEGG: hypothetical protein; signal transduction histidine kinase LytS 7557859 8362132 Cpin_5951 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003125570.1 7554932 R 485918 CDS YP_003125571.1 256424918 8362133 complement(7557929..7559410) 1 NC_013132.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 7559410 8362133 Cpin_5952 Chitinophaga pinensis DSM 2588 prolyl-tRNA synthetase YP_003125571.1 7557929 R 485918 CDS YP_003125572.1 256424919 8362134 7559643..7560659 1 NC_013132.1 KEGG: Hypothetical protein CBG04553; K10695 E3 ubiquitin-protein ligase RNF1/2; hypothetical protein 7560659 8362134 Cpin_5953 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125572.1 7559643 D 485918 CDS YP_003125573.1 256424920 8362135 7560751..7562337 1 NC_013132.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 7562337 8362135 Cpin_5954 Chitinophaga pinensis DSM 2588 aromatic hydrocarbon degradation membrane protein YP_003125573.1 7560751 D 485918 CDS YP_003125574.1 256424921 8362136 complement(7562477..7563379) 1 NC_013132.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 7563379 miaA 8362136 miaA Chitinophaga pinensis DSM 2588 tRNA delta(2)-isopentenylpyrophosphate transferase YP_003125574.1 7562477 R 485918 CDS YP_003125575.1 256424922 8362137 complement(7563479..7564054) 1 NC_013132.1 KEGG: GA22871 gene product from transcript GA22871- RA; hypothetical protein 7564054 8362137 Cpin_5956 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125575.1 7563479 R 485918 CDS YP_003125576.1 256424923 8362138 complement(7564175..7565626) 1 NC_013132.1 TIGRFAM: metal dependent phophohydrolase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: hypothetical protein; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 7565626 8362138 Cpin_5957 Chitinophaga pinensis DSM 2588 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_003125576.1 7564175 R 485918 CDS YP_003125577.1 256424924 8362139 complement(7565639..7566208) 1 NC_013132.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: pha:PSHAa0028 double-stranded RNA-binding protein; Sua5/YciO/YrdC/YwlC family protein 7566208 8362139 Cpin_5958 Chitinophaga pinensis DSM 2588 Sua5/YciO/YrdC/YwlC family protein YP_003125577.1 7565639 R 485918 CDS YP_003125578.1 256424925 8362140 complement(7566212..7567342) 1 NC_013132.1 PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3800 glycosyl transferase, group 1; group 1 glycosyl transferase 7567342 8362140 Cpin_5959 Chitinophaga pinensis DSM 2588 group 1 glycosyl transferase YP_003125578.1 7566212 R 485918 CDS YP_003125579.1 256424926 8362141 7567433..7568245 1 NC_013132.1 KEGG: mxa:MXAN_6779 2,3,4,5-tetrahydropyridine-2- carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 7568245 8362141 Cpin_5960 Chitinophaga pinensis DSM 2588 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_003125579.1 7567433 D 485918 CDS YP_003125580.1 256424927 8362142 7568420..7569571 1 NC_013132.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein; glycoside hydrolase 7569571 8362142 Cpin_5961 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125580.1 7568420 D 485918 CDS YP_003125581.1 256424928 8362144 7570764..7571816 1 NC_013132.1 PFAM: integrase catalytic region; KEGG: rms:RMA_0748 transposase; integrase catalytic subunit 7571816 8362144 Cpin_5962 Chitinophaga pinensis DSM 2588 integrase catalytic subunit YP_003125581.1 7570764 D 485918 CDS YP_003125582.1 256424929 8362145 complement(7572121..7572540) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_0842 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 7572540 8362145 Cpin_5963 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003125582.1 7572121 R 485918 CDS YP_003125583.1 256424930 8362146 complement(7572574..7572978) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_2963 transcriptional regulator, AraC family; AraC family transcriptional regulator 7572978 8362146 Cpin_5964 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125583.1 7572574 R 485918 CDS YP_003125584.1 256424931 8362147 complement(7573559..7574311) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: cps:CPS_0824 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 7574311 8362147 Cpin_5965 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125584.1 7573559 R 485918 CDS YP_003125585.1 256424932 8362148 complement(7574695..7575090) 1 NC_013132.1 PFAM: OsmC family protein; KEGG: dds:Ddes_1698 OsmC family protein; OsmC family protein 7575090 8362148 Cpin_5966 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003125585.1 7574695 R 485918 CDS YP_003125586.1 256424933 8362149 complement(7575117..7576166) 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: pst:PSPTO_2697 oxidoreductase, zinc-binding; alcohol dehydrogenase zinc-binding domain-containing protein 7576166 8362149 Cpin_5967 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003125586.1 7575117 R 485918 CDS YP_003125587.1 256424934 8362150 7576263..7576856 1 NC_013132.1 PFAM: redoxin; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: swp:swp_4660 thioredoxin; redoxin 7576856 8362150 Cpin_5968 Chitinophaga pinensis DSM 2588 redoxin YP_003125587.1 7576263 D 485918 CDS YP_003125588.1 256424935 8362151 complement(7576913..7577110) 1 NC_013132.1 hypothetical protein 7577110 8362151 Cpin_5969 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125588.1 7576913 R 485918 CDS YP_003125589.1 256424936 8362152 complement(7577271..7577558) 1 NC_013132.1 KEGG: ajs:Ajs_1383 hypothetical protein; hypothetical protein 7577558 8362152 Cpin_5970 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125589.1 7577271 R 485918 CDS YP_003125590.1 256424937 8362153 complement(7577641..7578534) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_2097 hypothetical protein; AraC family transcriptional regulator 7578534 8362153 Cpin_5971 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125590.1 7577641 R 485918 CDS YP_003125591.1 256424938 8362154 7578656..7579705 1 NC_013132.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: vfm:VFMJ11_A1186 flavin monoamine oxidase family protein; amine oxidase 7579705 8362154 Cpin_5972 Chitinophaga pinensis DSM 2588 amine oxidase YP_003125591.1 7578656 D 485918 CDS YP_003125592.1 256424939 8362155 7579729..7580295 1 NC_013132.1 KEGG: bcr:BCAH187_A1543 hypothetical protein; hypothetical protein 7580295 8362155 Cpin_5973 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125592.1 7579729 D 485918 CDS YP_003125593.1 256424940 8362156 complement(7580487..7580795) 1 NC_013132.1 PFAM: thioredoxin domain protein; KEGG: dde:Dde_2067 thioredoxin; thioredoxin domain-containing protein 7580795 8362156 Cpin_5974 Chitinophaga pinensis DSM 2588 thioredoxin domain-containing protein YP_003125593.1 7580487 R 485918 CDS YP_003125594.1 256424941 8362157 7581013..7581912 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_3605 hypothetical protein; AraC family transcriptional regulator 7581912 8362157 Cpin_5975 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125594.1 7581013 D 485918 CDS YP_003125595.1 256424942 8362158 7582069..7582461 1 NC_013132.1 PFAM: OsmC family protein; KEGG: msu:MS2004 hypothetical protein; OsmC family protein 7582461 8362158 Cpin_5976 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003125595.1 7582069 D 485918 CDS YP_003125596.1 256424943 8362159 7582566..7583618 1 NC_013132.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: vfm:VFMJ11_A1186 flavin monoamine oxidase family protein; amine oxidase 7583618 8362159 Cpin_5977 Chitinophaga pinensis DSM 2588 amine oxidase YP_003125596.1 7582566 D 485918 CDS YP_003125597.1 256424944 8362160 complement(7583665..7584858) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: abc:ACICU_01459 major facilitator superfamily permease; major facilitator superfamily protein 7584858 8362160 Cpin_5978 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003125597.1 7583665 R 485918 CDS YP_003125598.1 256424945 8362161 join(7585643..7585903,7585903..7586754) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: cja:CJA_0556 transposase; transposase IS3/IS911 family protein 7586754 8362161 Cpin_5979 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003125598.1 7585643 D 485918 CDS YP_003125599.1 256424946 8362164 7590320..7590640 1 NC_013132.1 hypothetical protein 7590640 8362164 Cpin_5982 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125599.1 7590320 D 485918 CDS YP_003125600.1 256424947 8362167 7591493..7592521 1 NC_013132.1 PFAM: beta-lactamase; KEGG: mxa:MXAN_2136 beta-lactamase; beta-lactamase 7592521 8362167 Cpin_5985 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003125600.1 7591493 D 485918 CDS YP_003125601.1 256424948 8362168 complement(7592667..7593572) 1 NC_013132.1 hypothetical protein 7593572 8362168 Cpin_5986 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125601.1 7592667 R 485918 CDS YP_003125602.1 256424949 8362169 7593963..7594253 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7594253 8362169 Cpin_5987 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125602.1 7593963 D 485918 CDS YP_003125603.1 256424950 8362170 7594609..7595097 1 NC_013132.1 hypothetical protein 7595097 8362170 Cpin_5988 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125603.1 7594609 D 485918 CDS YP_003125604.1 256424951 8362171 complement(7595164..7595565) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bsu:BSU05290 hypothetical protein; HxlR family transcriptional regulator 7595565 8362171 Cpin_5989 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003125604.1 7595164 R 485918 CDS YP_003125605.1 256424952 8362172 7595654..7596670 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ppw:PputW619_3210 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 7596670 8362172 Cpin_5990 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003125605.1 7595654 D 485918 CDS YP_003125606.1 256424953 8362173 7596692..7596934 1 NC_013132.1 hypothetical protein 7596934 8362173 Cpin_5991 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125606.1 7596692 D 485918 CDS YP_003125607.1 256424954 8362174 7597191..7598168 1 NC_013132.1 hypothetical protein 7598168 8362174 Cpin_5992 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125607.1 7597191 D 485918 CDS YP_003125608.1 256424955 8362175 complement(7598443..7598652) 1 NC_013132.1 hypothetical protein 7598652 8362175 Cpin_5993 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125608.1 7598443 R 485918 CDS YP_003125609.1 256424956 8362176 complement(7598879..7599118) 1 NC_013132.1 hypothetical protein 7599118 8362176 Cpin_5994 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125609.1 7598879 R 485918 CDS YP_003125610.1 256424957 8362177 complement(7599124..7600107) 1 NC_013132.1 hypothetical protein 7600107 8362177 Cpin_5995 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125610.1 7599124 R 485918 CDS YP_003125611.1 256424958 8362178 complement(7600080..7600277) 1 NC_013132.1 hypothetical protein 7600277 8362178 Cpin_5996 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125611.1 7600080 R 485918 CDS YP_003125612.1 256424959 8362179 complement(7600240..7600530) 1 NC_013132.1 hypothetical protein 7600530 8362179 Cpin_5997 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125612.1 7600240 R 485918 CDS YP_003125613.1 256424960 8362180 7600951..7601817 1 NC_013132.1 hypothetical protein 7601817 8362180 Cpin_5998 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125613.1 7600951 D 485918 CDS YP_003125614.1 256424961 8362181 complement(7601943..7602734) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nar:Saro_2473 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 7602734 8362181 Cpin_5999 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125614.1 7601943 R 485918 CDS YP_003125615.1 256424962 8362182 complement(7602907..7603743) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swp:swp_4627 transcriptional regulator, AraC family; AraC family transcriptional regulator 7603743 8362182 Cpin_6000 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125615.1 7602907 R 485918 CDS YP_003125616.1 256424963 8362183 complement(7603816..7604259) 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_4607 hypothetical protein; activator of Hsp90 ATPase 1 family protein 7604259 8362183 Cpin_6001 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003125616.1 7603816 R 485918 CDS YP_003125617.1 256424964 8362184 complement(7604592..7604951) 1 NC_013132.1 KEGG: bcz:BCZK3228 hypothetical protein; hypothetical protein 7604951 8362184 Cpin_6002 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125617.1 7604592 R 485918 CDS YP_003125618.1 256424965 8362185 complement(7605034..7605624) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: dal:Dalk_3453 cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator 7605624 8362185 Cpin_6003 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125618.1 7605034 R 485918 CDS YP_003125619.1 256424966 8362186 complement(7605654..7606847) 1 NC_013132.1 PFAM: protein of unknown function DUF1006; KEGG: swd:Swoo_4914 hypothetical protein; hypothetical protein 7606847 8362186 Cpin_6004 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125619.1 7605654 R 485918 CDS YP_003125620.1 256424967 8362187 7607008..7607619 1 NC_013132.1 KEGG: aba:Acid345_2240 hypothetical protein; hypothetical protein 7607619 8362187 Cpin_6005 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125620.1 7607008 D 485918 CDS YP_003125621.1 256424968 8362188 7607625..7607927 1 NC_013132.1 hypothetical protein 7607927 8362188 Cpin_6006 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125621.1 7607625 D 485918 CDS YP_003125622.1 256424969 8362189 7607924..7608436 1 NC_013132.1 KEGG: scl:sce1819 hypothetical protein; hypothetical protein 7608436 8362189 Cpin_6007 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125622.1 7607924 D 485918 CDS YP_003125623.1 256424970 8362190 complement(7608514..7609563) 1 NC_013132.1 hypothetical protein 7609563 8362190 Cpin_6008 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125623.1 7608514 R 485918 CDS YP_003125624.1 256424971 8362191 complement(7609629..7610720) 1 NC_013132.1 KEGG: mxa:MXAN_2256 thioredoxin; hypothetical protein 7610720 8362191 Cpin_6009 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125624.1 7609629 R 485918 CDS YP_003125625.1 256424972 8362192 complement(7610958..7611491) 1 NC_013132.1 KEGG: dal:Dalk_5077 domain of unknown function DUF1877; hypothetical protein 7611491 8362192 Cpin_6010 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125625.1 7610958 R 485918 CDS YP_003125626.1 256424973 8362193 complement(7611540..7612709) 1 NC_013132.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: vha:VIBHAR_01258 pseudouridylate synthase; pseudouridine synthase 7612709 8362193 Cpin_6011 Chitinophaga pinensis DSM 2588 pseudouridine synthase YP_003125626.1 7611540 R 485918 CDS YP_003125627.1 256424974 8362194 7613044..7613280 1 NC_013132.1 KEGG: yen:YE2901 hypothetical protein; hypothetical protein 7613280 8362194 Cpin_6012 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125627.1 7613044 D 485918 CDS YP_003125628.1 256424975 8362195 complement(7613291..7613785) 1 NC_013132.1 KEGG: aba:Acid345_1191 hypothetical protein; hypothetical protein 7613785 8362195 Cpin_6013 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125628.1 7613291 R 485918 CDS YP_003125629.1 256424976 8362196 7614133..7614399 1 NC_013132.1 hypothetical protein 7614399 8362196 Cpin_6014 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125629.1 7614133 D 485918 CDS YP_003125630.1 256424977 8362197 7614540..7614845 1 NC_013132.1 hypothetical protein 7614845 8362197 Cpin_6015 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125630.1 7614540 D 485918 CDS YP_003125631.1 256424978 8362198 7614999..7615382 1 NC_013132.1 KEGG: cco:CCC13826_1047 periplasmic protein; hypothetical protein 7615382 8362198 Cpin_6016 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125631.1 7614999 D 485918 CDS YP_003125632.1 256424979 8362199 complement(7615389..7616201) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 7616201 8362199 Cpin_6017 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125632.1 7615389 R 485918 CDS YP_003125633.1 256424980 8362200 complement(7616499..7617302) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_0679 transcriptional regulatory protein; AraC family transcriptional regulator 7617302 8362200 Cpin_6018 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125633.1 7616499 R 485918 CDS YP_003125634.1 256424981 8362201 complement(7617364..7618383) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1385 short-chain dehydrogenase/oxidoreductase; short-chain dehydrogenase/reductase SDR 7618383 8362201 Cpin_6019 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125634.1 7617364 R 485918 CDS YP_003125635.1 256424982 8362202 complement(7618473..7619231) 1 NC_013132.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: afw:Anae109_0474 trans-aconitate 2- methyltransferase; trans-aconitate 2-methyltransferase 7619231 8362202 Cpin_6020 Chitinophaga pinensis DSM 2588 trans-aconitate 2-methyltransferase YP_003125635.1 7618473 R 485918 CDS YP_003125636.1 256424983 8362203 7619451..7619900 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rfr:Rfer_2543 hypothetical protein; activator of Hsp90 ATPase 1 family protein 7619900 8362203 Cpin_6021 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003125636.1 7619451 D 485918 CDS YP_003125637.1 256424984 8362204 7620069..7621028 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: mxa:MXAN_5247 glycosyl hydrolase, family 43; glycoside hydrolase 7621028 8362204 Cpin_6022 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125637.1 7620069 D 485918 CDS YP_003125638.1 256424985 8362205 complement(7621040..7621978) 1 NC_013132.1 hypothetical protein 7621978 8362205 Cpin_6023 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125638.1 7621040 R 485918 CDS YP_003125639.1 256424986 8362206 7622133..7622495 1 NC_013132.1 KEGG: acp:A2cp1_3395 hypothetical protein; hypothetical protein 7622495 8362206 Cpin_6024 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125639.1 7622133 D 485918 CDS YP_003125640.1 256424987 8362207 complement(7622505..7623413) 1 NC_013132.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; Arylesterase; KEGG: bph:Bphy_5161 gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 7623413 8362207 Cpin_6025 Chitinophaga pinensis DSM 2588 SMP-30/gluconolaconase/LRE domain-containing protein YP_003125640.1 7622505 R 485918 CDS YP_003125641.1 256424988 8362208 7623653..7626016 1 NC_013132.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: sus:Acid_3742 alpha-L-rhamnosidase; alpha-L-rhamnosidase 7626016 8362208 Cpin_6026 Chitinophaga pinensis DSM 2588 alpha-L-rhamnosidase YP_003125641.1 7623653 D 485918 CDS YP_003125642.1 256424989 8362211 complement(7628980..7629711) 1 NC_013132.1 KEGG: pfl:PFL_6130 hypothetical protein; hypothetical protein 7629711 8362211 Cpin_6029 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125642.1 7628980 R 485918 CDS YP_003125643.1 256424990 8362212 complement(7629846..7630301) 1 NC_013132.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: nmn:NMCC_0464 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl-tetrahydropterin synthase 7630301 8362212 Cpin_6030 Chitinophaga pinensis DSM 2588 6-pyruvoyl-tetrahydropterin synthase YP_003125643.1 7629846 R 485918 CDS YP_003125644.1 256424991 8362213 7630460..7630762 1 NC_013132.1 hypothetical protein 7630762 8362213 Cpin_6031 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125644.1 7630460 D 485918 CDS YP_003125645.1 256424992 8362214 7631037..7631417 1 NC_013132.1 PFAM: DoxX family protein; KEGG: scl:sce5426 hypothetical protein; DoxX family protein 7631417 8362214 Cpin_6032 Chitinophaga pinensis DSM 2588 DoxX family protein YP_003125645.1 7631037 D 485918 CDS YP_003125646.1 256424993 8362215 7631459..7631962 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: hch:HCH_03204 hypothetical protein; activator of Hsp90 ATPase 1 family protein 7631962 8362215 Cpin_6033 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003125646.1 7631459 D 485918 CDS YP_003125647.1 256424994 8362216 complement(7632053..7632937) 1 NC_013132.1 hypothetical protein 7632937 8362216 Cpin_6034 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125647.1 7632053 R 485918 CDS YP_003125648.1 256424995 8362217 complement(7633010..7635172) 1 NC_013132.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cvi:CV_1674 isoquinoline 1-oxidoreductase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 7635172 8362217 Cpin_6035 Chitinophaga pinensis DSM 2588 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_003125648.1 7633010 R 485918 CDS YP_003125649.1 256424996 8362218 7635387..7636601 1 NC_013132.1 PFAM: esterase; KEGG: shn:Shewana3_1514 esterase; esterase 7636601 8362218 Cpin_6036 Chitinophaga pinensis DSM 2588 esterase YP_003125649.1 7635387 D 485918 CDS YP_003125650.1 256424997 8362219 7636793..7636927 1 NC_013132.1 hypothetical protein 7636927 8362219 Cpin_6037 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125650.1 7636793 D 485918 CDS YP_003125651.1 256424998 8362220 7637047..7638063 1 NC_013132.1 hypothetical protein 7638063 8362220 Cpin_6038 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125651.1 7637047 D 485918 CDS YP_003125652.1 256424999 8362221 complement(7638157..7638858) 1 NC_013132.1 hypothetical protein 7638858 8362221 Cpin_6039 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125652.1 7638157 R 485918 CDS YP_003125653.1 256425000 8362222 complement(7638876..7639523) 1 NC_013132.1 KEGG: rpc:RPC_3570 sec-C metal-binding protein; hypothetical protein 7639523 8362222 Cpin_6040 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125653.1 7638876 R 485918 CDS YP_003125654.1 256425001 8362223 7640576..7641199 1 NC_013132.1 hypothetical protein 7641199 8362223 Cpin_6041 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125654.1 7640576 D 485918 CDS YP_003125655.1 256425002 8362224 complement(7641259..7641624) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pin:Ping_2286 response regulator GltR; response regulator receiver protein 7641624 8362224 Cpin_6042 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003125655.1 7641259 R 485918 CDS YP_003125656.1 256425003 8362225 7641897..7642331 1 NC_013132.1 hypothetical protein 7642331 8362225 Cpin_6043 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125656.1 7641897 D 485918 CDS YP_003125657.1 256425004 8362226 7642530..7644035 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: mxa:MXAN_5247 glycosyl hydrolase, family 43; glycoside hydrolase 7644035 8362226 Cpin_6044 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125657.1 7642530 D 485918 CDS YP_003125658.1 256425005 8362227 complement(7644075..7644236) 1 NC_013132.1 KEGG: sus:Acid_2708 short chain dehydrogenase; hypothetical protein 7644236 8362227 Cpin_6045 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125658.1 7644075 R 485918 CDS YP_003125659.1 256425006 8362228 complement(7644341..7645288) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_3605 hypothetical protein; AraC family transcriptional regulator 7645288 8362228 Cpin_6046 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125659.1 7644341 R 485918 CDS YP_003125660.1 256425007 8362229 7645363..7646424 1 NC_013132.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: vfm:VFMJ11_A1186 flavin monoamine oxidase family protein; amine oxidase 7646424 8362229 Cpin_6047 Chitinophaga pinensis DSM 2588 amine oxidase YP_003125660.1 7645363 D 485918 CDS YP_003125661.1 256425008 8362230 complement(7646560..7646970) 1 NC_013132.1 KEGG: sde:Sde_3604 hypothetical protein; hypothetical protein 7646970 8362230 Cpin_6048 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125661.1 7646560 R 485918 CDS YP_003125662.1 256425009 8362231 complement(7647086..7647601) 1 NC_013132.1 KEGG: nmu:Nmul_A2110 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 7647601 8362231 Cpin_6049 Chitinophaga pinensis DSM 2588 methionine-R-sulfoxide reductase YP_003125662.1 7647086 R 485918 CDS YP_003125663.1 256425010 8362232 complement(7647624..7648310) 1 NC_013132.1 KEGG: ilo:IL2039 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 7648310 8362232 Cpin_6050 Chitinophaga pinensis DSM 2588 peptide methionine sulfoxide reductase YP_003125663.1 7647624 R 485918 CDS YP_003125664.1 256425011 8362233 complement(7648355..7648801) 1 NC_013132.1 PFAM: thioredoxin domain protein; KEGG: AGAP012940-PA; thioredoxin domain-containing protein 7648801 8362233 Cpin_6051 Chitinophaga pinensis DSM 2588 thioredoxin domain-containing protein YP_003125664.1 7648355 R 485918 CDS YP_003125665.1 256425012 8362234 complement(7649104..7649334) 1 NC_013132.1 KEGG: neu:NE0084 thioredoxin; thioredoxin 7649334 8362234 Cpin_6052 Chitinophaga pinensis DSM 2588 thioredoxin YP_003125665.1 7649104 R 485918 CDS YP_003125666.1 256425013 8362235 7649849..7651267 1 NC_013132.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_A4302 GntR family transcriptional regulator; GntR family transcriptional regulator 7651267 8362235 Cpin_6053 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003125666.1 7649849 D 485918 CDS YP_003125667.1 256425014 8362236 7651624..7652382 1 NC_013132.1 KEGG: sbl:Sbal_3687 hypothetical protein; hypothetical protein 7652382 8362236 Cpin_6054 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125667.1 7651624 D 485918 CDS YP_003125668.1 256425015 8362237 7653105..7654250 1 NC_013132.1 KEGG: rpi:Rpic_3640 outer membrane autotransporter barrel domain protein; hypothetical protein 7654250 8362237 Cpin_6055 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125668.1 7653105 D 485918 CDS YP_003125669.1 256425016 8362238 7654329..7655501 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; PKD domain-containing protein 7655501 8362238 Cpin_6056 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003125669.1 7654329 D 485918 CDS YP_003125670.1 256425017 8362239 7656098..7656808 1 NC_013132.1 hypothetical protein 7656808 8362239 Cpin_6057 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125670.1 7656098 D 485918 CDS YP_003125671.1 256425018 8362240 7656836..7657996 1 NC_013132.1 KEGG: sit:TM1040_3458 hypothetical protein; hypothetical protein 7657996 8362240 Cpin_6058 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125671.1 7656836 D 485918 CDS YP_003125672.1 256425019 8362241 7658090..7659121 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 7659121 8362241 Cpin_6059 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003125672.1 7658090 D 485918 CDS YP_003125673.1 256425020 8362242 7659096..7659857 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region; LytTR family two component transcriptional regulator 7659857 8362242 Cpin_6060 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003125673.1 7659096 D 485918 CDS YP_003125674.1 256425021 8362243 7659867..7660739 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1794 hypothetical protein; AraC family transcriptional regulator 7660739 8362243 Cpin_6061 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125674.1 7659867 D 485918 CDS YP_003125675.1 256425022 8362244 complement(7660812..7661600) 1 NC_013132.1 KEGG: bur:Bcep18194_B0526 hypothetical protein; hypothetical protein 7661600 8362244 Cpin_6062 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125675.1 7660812 R 485918 CDS YP_003125676.1 256425023 8362245 complement(7661748..7662059) 1 NC_013132.1 hypothetical protein 7662059 8362245 Cpin_6063 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125676.1 7661748 R 485918 CDS YP_003125677.1 256425024 8362246 complement(7662224..7663528) 1 NC_013132.1 hypothetical protein 7663528 8362246 Cpin_6064 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125677.1 7662224 R 485918 CDS YP_003125678.1 256425025 8362247 complement(7663534..7664211) 1 NC_013132.1 hypothetical protein 7664211 8362247 Cpin_6065 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125678.1 7663534 R 485918 CDS YP_003125679.1 256425026 8362248 complement(7664208..7665326) 1 NC_013132.1 KEGG: efe:EFER_0595 hypothetical protein froml phage origin; hypothetical protein 7665326 8362248 Cpin_6066 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125679.1 7664208 R 485918 CDS YP_003125680.1 256425027 8362249 7665726..7666133 1 NC_013132.1 hypothetical protein 7666133 8362249 Cpin_6067 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125680.1 7665726 D 485918 CDS YP_003125681.1 256425028 8362250 complement(7666185..7666931) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: ppd:Ppro_3008 multi-sensor hybrid histidine kinase; response regulator receiver protein 7666931 8362250 Cpin_6068 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003125681.1 7666185 R 485918 CDS YP_003125682.1 256425029 8362251 complement(7666942..7668921) 1 NC_013132.1 PFAM: histidine kinase dimerisation/phosphoacceptor; hypothetical protein; ATP-binding region ATPase domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: gur:Gura_2118 signal transduction histidine kinase; signal transduction histidine kinase 7668921 8362251 Cpin_6069 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase YP_003125682.1 7666942 R 485918 CDS YP_003125683.1 256425030 8362252 7669283..7670143 1 NC_013132.1 PFAM: inner-membrane translocator; KEGG: bbr:BB2756 permease component of ABC transporter protein; inner-membrane translocator 7670143 8362252 Cpin_6070 Chitinophaga pinensis DSM 2588 inner-membrane translocator YP_003125683.1 7669283 D 485918 CDS YP_003125684.1 256425031 8362253 7670145..7671992 1 NC_013132.1 PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: mrd:Mrad2831_2899 ABC transporter related; ABC transporter 7671992 8362253 Cpin_6071 Chitinophaga pinensis DSM 2588 ABC transporter YP_003125684.1 7670145 D 485918 CDS YP_003125685.1 256425032 8362254 7671982..7672773 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0002318 branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter 7672773 8362254 Cpin_6072 Chitinophaga pinensis DSM 2588 ABC transporter YP_003125685.1 7671982 D 485918 CDS YP_003125686.1 256425033 8362255 7672770..7674050 1 NC_013132.1 PFAM: extracellular ligand-binding receptor; KEGG: oca:OCAR_6800 ABC branched chain amino acid family transporter; extracellular ligand-binding receptor 7674050 8362255 Cpin_6073 Chitinophaga pinensis DSM 2588 extracellular ligand-binding receptor YP_003125686.1 7672770 D 485918 CDS YP_003125687.1 256425034 8362256 7674055..7675026 1 NC_013132.1 hypothetical protein 7675026 8362256 Cpin_6074 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125687.1 7674055 D 485918 CDS YP_003125688.1 256425035 8362257 7674974..7675648 1 NC_013132.1 PFAM: cupin; KEGG: mmr:Mmar10_1976 hypothetical protein; cupin 7675648 8362257 Cpin_6075 Chitinophaga pinensis DSM 2588 cupin YP_003125688.1 7674974 D 485918 CDS YP_003125689.1 256425036 8362258 complement(7675715..7676473) 1 NC_013132.1 KEGG: sus:Acid_1651 metal-dependent hydrolase; metal-dependent hydrolase 7676473 8362258 Cpin_6076 Chitinophaga pinensis DSM 2588 metal-dependent hydrolase YP_003125689.1 7675715 R 485918 CDS YP_003125690.1 256425037 8362262 complement(7677520..7678068) 1 NC_013132.1 hypothetical protein 7678068 8362262 Cpin_6080 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125690.1 7677520 R 485918 CDS YP_003125691.1 256425038 8362263 complement(7678196..7679314) 1 NC_013132.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ccs:CCNA_01283 NAD-dependent oxidoreductase; oxidoreductase domain-containing protein 7679314 8362263 Cpin_6081 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003125691.1 7678196 R 485918 CDS YP_003125692.1 256425039 8362264 7679579..7681987 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 7681987 8362264 Cpin_6082 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125692.1 7679579 D 485918 CDS YP_003125693.1 256425040 8362265 complement(7682051..7683655) 1 NC_013132.1 KEGG: saz:Sama_0297 endo-alpha-mannosidase; hypothetical protein 7683655 8362265 Cpin_6083 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125693.1 7682051 R 485918 CDS YP_003125694.1 256425041 8362266 complement(7683979..7684896) 1 NC_013132.1 PFAM: protein of unknown function DUF34; KEGG: aba:Acid345_2075 hypothetical protein; hypothetical protein 7684896 8362266 Cpin_6084 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125694.1 7683979 R 485918 CDS YP_003125695.1 256425042 8362267 complement(7685099..7686448) 1 NC_013132.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: nmu:Nmul_A0927 phosphoesterase, PA- phosphatase related; PA-phosphatase-like phosphoesterase 7686448 8362267 Cpin_6085 Chitinophaga pinensis DSM 2588 PA-phosphatase-like phosphoesterase YP_003125695.1 7685099 R 485918 CDS YP_003125696.1 256425043 8362268 7686680..7687462 1 NC_013132.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: msl:Msil_1882 lytic transglycosylase catalytic; peptidoglycan-binding domain 1 protein 7687462 8362268 Cpin_6086 Chitinophaga pinensis DSM 2588 peptidoglycan-binding domain 1 protein YP_003125696.1 7686680 D 485918 CDS YP_003125697.1 256425044 8362269 7687888..7688679 1 NC_013132.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: bha:BH2887 hypothetical protein; type 12 methyltransferase 7688679 8362269 Cpin_6087 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003125697.1 7687888 D 485918 CDS YP_003125698.1 256425045 8362270 7688754..7690361 1 NC_013132.1 KEGG: xca:xccb100_4421 exported conserved hypothetical protein; hypothetical protein 7690361 8362270 Cpin_6088 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125698.1 7688754 D 485918 CDS YP_003125699.1 256425046 8362271 complement(7690438..7690605) 1 NC_013132.1 hypothetical protein 7690605 8362271 Cpin_6089 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125699.1 7690438 R 485918 CDS YP_003125700.1 256425047 8362272 complement(7690621..7691961) 1 NC_013132.1 PFAM: cytochrome C class I; KEGG: abu:Abu_1734 hypothetical protein; cytochrome C class I 7691961 8362272 Cpin_6090 Chitinophaga pinensis DSM 2588 cytochrome C class I YP_003125700.1 7690621 R 485918 CDS YP_003125701.1 256425048 8362273 complement(7691999..7693498) 1 NC_013132.1 KEGG: abu:Abu_1735 cytochrome; cytochrome 7693498 8362273 Cpin_6091 Chitinophaga pinensis DSM 2588 cytochrome YP_003125701.1 7691999 R 485918 CDS YP_003125702.1 256425049 8362274 complement(7693571..7693756) 1 NC_013132.1 hypothetical protein 7693756 8362274 Cpin_6092 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125702.1 7693571 R 485918 CDS YP_003125703.1 256425050 8362275 complement(7693743..7694630) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator 7694630 8362275 Cpin_6093 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125703.1 7693743 R 485918 CDS YP_003125704.1 256425051 8362276 complement(7694741..7695106) 1 NC_013132.1 hypothetical protein 7695106 8362276 Cpin_6094 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125704.1 7694741 R 485918 CDS YP_003125705.1 256425052 8362277 complement(7695114..7695755) 1 NC_013132.1 PFAM: electron transport protein SCO1/SenC; KEGG: sus:Acid_4379 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 7695755 8362277 Cpin_6095 Chitinophaga pinensis DSM 2588 electron transport protein SCO1/SenC YP_003125705.1 7695114 R 485918 CDS YP_003125706.1 256425053 8362278 7696126..7696779 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cps:CPS_0659 AraC family transcriptional regulator; AraC family transcriptional regulator 7696779 8362278 Cpin_6096 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125706.1 7696126 D 485918 CDS YP_003125707.1 256425054 8362279 complement(7696852..7697478) 1 NC_013132.1 KEGG: conserved hypothetical protein; hypothetical protein 7697478 8362279 Cpin_6097 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125707.1 7696852 R 485918 CDS YP_003125708.1 256425055 8362280 7697721..7697912 1 NC_013132.1 hypothetical protein 7697912 8362280 Cpin_6098 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125708.1 7697721 D 485918 CDS YP_003125709.1 256425056 8362281 complement(7697956..7698441) 1 NC_013132.1 KEGG: mpo:Mpop_0711 hypothetical protein; hypothetical protein 7698441 8362281 Cpin_6099 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125709.1 7697956 R 485918 CDS YP_003125710.1 256425057 8362282 complement(7698630..7699007) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aba:Acid345_2719 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 7699007 8362282 Cpin_6100 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003125710.1 7698630 R 485918 CDS YP_003125711.1 256425058 8362283 7699111..7699965 1 NC_013132.1 hypothetical protein 7699965 8362283 Cpin_6101 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125711.1 7699111 D 485918 CDS YP_003125712.1 256425059 8362284 complement(7699973..7700731) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sus:Acid_2309 response regulator receiver protein; LytTR family two component transcriptional regulator 7700731 8362284 Cpin_6102 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003125712.1 7699973 R 485918 CDS YP_003125713.1 256425060 8362285 complement(7700745..7701833) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 7701833 8362285 Cpin_6103 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003125713.1 7700745 R 485918 CDS YP_003125714.1 256425061 8362286 complement(7701952..7703358) 1 NC_013132.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sus:Acid_7834 RND efflux system outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein 7703358 8362286 Cpin_6104 Chitinophaga pinensis DSM 2588 NodT family RND efflux system outer membrane lipoprotein YP_003125714.1 7701952 R 485918 CDS YP_003125715.1 256425062 8362287 complement(7703368..7706544) 1 NC_013132.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mfa:Mfla_0373 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 7706544 8362287 Cpin_6105 Chitinophaga pinensis DSM 2588 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003125715.1 7703368 R 485918 CDS YP_003125716.1 256425063 8362288 complement(7706567..7707703) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sat:SYN_02948 acriflavin resistance periplasmic protein; RND family efflux transporter MFP subunit 7707703 8362288 Cpin_6106 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003125716.1 7706567 R 485918 CDS YP_003125717.1 256425064 8362289 complement(7707951..7708601) 1 NC_013132.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pmy:Pmen_0809 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein 7708601 8362289 Cpin_6107 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003125717.1 7707951 R 485918 CDS YP_003125718.1 256425065 8362290 complement(7708716..7709600) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB0725 hypothetical protein; AraC family transcriptional regulator 7709600 8362290 Cpin_6108 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125718.1 7708716 R 485918 CDS YP_003125719.1 256425066 8362291 7709755..7710477 1 NC_013132.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 7710477 8362291 Cpin_6109 Chitinophaga pinensis DSM 2588 glutamine amidotransferase YP_003125719.1 7709755 D 485918 CDS YP_003125720.1 256425067 8362292 complement(7710512..7711246) 1 NC_013132.1 PFAM: alanine racemase; KEGG: sml:Smlt2931 racemase; alanine racemase 7711246 8362292 Cpin_6110 Chitinophaga pinensis DSM 2588 alanine racemase YP_003125720.1 7710512 R 485918 CDS YP_003125721.1 256425068 8362293 7711407..7711739 1 NC_013132.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: acp:A2cp1_1086 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 7711739 8362293 Cpin_6111 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003125721.1 7711407 D 485918 CDS YP_003125722.1 256425069 8362294 7711794..7712633 1 NC_013132.1 in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine; arsenite S-adenosylmethyltransferase 7712633 arsM 8362294 arsM Chitinophaga pinensis DSM 2588 arsenite S-adenosylmethyltransferase YP_003125722.1 7711794 D 485918 CDS YP_003125723.1 256425070 8362295 7712659..7713075 1 NC_013132.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: pca:Pcar_1772 protein-tyrosine-phosphatase; protein tyrosine phosphatase 7713075 8362295 Cpin_6113 Chitinophaga pinensis DSM 2588 protein tyrosine phosphatase YP_003125723.1 7712659 D 485918 CDS YP_003125724.1 256425071 8362296 7713079..7714146 1 NC_013132.1 TIGRFAM: arsenic resistance protein; PFAM: bile acid:sodium symporter; KEGG: dar:Daro_2636 arsenic resistance protein ACR3; arsenic resistance protein 7714146 8362296 Cpin_6114 Chitinophaga pinensis DSM 2588 arsenic resistance protein YP_003125724.1 7713079 D 485918 CDS YP_003125725.1 256425072 8362297 complement(7714161..7714574) 1 NC_013132.1 hypothetical protein 7714574 8362297 Cpin_6115 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125725.1 7714161 R 485918 CDS YP_003125726.1 256425073 8362298 complement(7714876..7715157) 1 NC_013132.1 SMART: helix-turn-helix domain protein; KEGG: pmr:PMI1817 transcriptional regulator; helix-turn-helix domain-containing protein 7715157 8362298 Cpin_6116 Chitinophaga pinensis DSM 2588 helix-turn-helix domain-containing protein YP_003125726.1 7714876 R 485918 CDS YP_003125727.1 256425074 8362299 7715218..7715322 1 NC_013132.1 hypothetical protein 7715322 8362299 Cpin_6117 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125727.1 7715218 D 485918 CDS YP_003125728.1 256425075 8362300 7715442..7715726 1 NC_013132.1 hypothetical protein 7715726 8362300 Cpin_6118 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125728.1 7715442 D 485918 CDS YP_003125729.1 256425076 8362301 7716135..7717376 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_0087 major facilitator family transporter; major facilitator superfamily protein 7717376 8362301 Cpin_6119 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003125729.1 7716135 D 485918 CDS YP_003125730.1 256425077 8362302 7717376..7718251 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: eca:ECA1629 AraC family transcription regulator; AraC family transcriptional regulator 7718251 8362302 Cpin_6120 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125730.1 7717376 D 485918 CDS YP_003125731.1 256425078 8362303 7718626..7719987 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: dde:Dde_3627 outer membrane efflux protein; outer membrane efflux protein 7719987 8362303 Cpin_6121 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003125731.1 7718626 D 485918 CDS YP_003125732.1 256425079 8362304 7720006..7721049 1 NC_013132.1 PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_3406 secretion protein HlyD family protein; secretion protein HlyD family protein 7721049 8362304 Cpin_6122 Chitinophaga pinensis DSM 2588 secretion protein HlyD family protein YP_003125732.1 7720006 D 485918 CDS YP_003125733.1 256425080 8362305 7721052..7722641 1 NC_013132.1 KEGG: sme:SM_b20698 transport protein; hypothetical protein 7722641 8362305 Cpin_6123 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125733.1 7721052 D 485918 CDS YP_003125734.1 256425081 8362306 7722623..7723459 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abm:ABSDF1534 AraC family transcriptional regulator; AraC family transcriptional regulator 7723459 8362306 Cpin_6124 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125734.1 7722623 D 485918 CDS YP_003125735.1 256425082 8362307 7723871..7724386 1 NC_013132.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: bcj:BCAL0828 G/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase 7724386 8362307 Cpin_6125 Chitinophaga pinensis DSM 2588 uracil-DNA glycosylase YP_003125735.1 7723871 D 485918 CDS YP_003125736.1 256425083 8362308 7724484..7727252 1 NC_013132.1 KEGG: rce:RC1_2264 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: transketolase central region; dehydrogenase E1 component; 2-oxoglutarate dehydrogenase, E1 subunit 7727252 8362308 Cpin_6126 Chitinophaga pinensis DSM 2588 2-oxoglutarate dehydrogenase, E1 subunit YP_003125736.1 7724484 D 485918 CDS YP_003125737.1 256425084 8362309 7727289..7727804 1 NC_013132.1 KEGG: bsu:BSU32150 transcriptional regulator; hypothetical protein 7727804 8362309 Cpin_6127 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125737.1 7727289 D 485918 CDS YP_003125738.1 256425085 8362310 7727864..7729603 1 NC_013132.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: fph:Fphi_1548 acetolactate synthase large subunit; acetolactate synthase large subunit 7729603 8362310 Cpin_6128 Chitinophaga pinensis DSM 2588 acetolactate synthase large subunit YP_003125738.1 7727864 D 485918 CDS YP_003125739.1 256425086 8362311 complement(7729648..7731813) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: sfr:Sfri_2818 TonB-dependent receptor, plug; TonB-dependent receptor plug 7731813 8362311 Cpin_6129 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125739.1 7729648 R 485918 CDS YP_003125740.1 256425087 8362312 complement(7731893..7732231) 1 NC_013132.1 hypothetical protein 7732231 8362312 Cpin_6130 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125740.1 7731893 R 485918 CDS YP_003125741.1 256425088 8362313 7732316..7734583 1 NC_013132.1 PFAM: alpha-L-rhamnosidase; KEGG: hypothetical protein; alpha-L-rhamnosidase 7734583 8362313 Cpin_6131 Chitinophaga pinensis DSM 2588 alpha-L-rhamnosidase YP_003125741.1 7732316 D 485918 CDS YP_003125742.1 256425089 8362314 7734716..7735108 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bba:Bd3673 hypothetical protein; bleomycin resistance protein 7735108 8362314 Cpin_6132 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003125742.1 7734716 D 485918 CDS YP_003125743.1 256425090 8362315 7735210..7736001 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_0923 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 7736001 8362315 Cpin_6133 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125743.1 7735210 D 485918 CDS YP_003125744.1 256425091 8362316 7736021..7736938 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 7736938 8362316 Cpin_6134 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125744.1 7736021 D 485918 CDS YP_003125745.1 256425092 8362317 complement(7736952..7737530) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 7737530 8362317 Cpin_6135 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125745.1 7736952 R 485918 CDS YP_003125746.1 256425093 8362318 7737644..7738525 1 NC_013132.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_3591 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 7738525 8362318 Cpin_6136 Chitinophaga pinensis DSM 2588 enoyl-CoA hydratase/isomerase YP_003125746.1 7737644 D 485918 CDS YP_003125747.1 256425094 8362319 complement(7738578..7738784) 1 NC_013132.1 hypothetical protein 7738784 8362319 Cpin_6137 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125747.1 7738578 R 485918 CDS YP_003125748.1 256425095 8362320 complement(7738916..7739494) 1 NC_013132.1 PFAM: Domain of unknown function DUF1801; KEGG: bsu:BSU05210 hypothetical protein; hypothetical protein 7739494 8362320 Cpin_6138 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125748.1 7738916 R 485918 CDS YP_003125749.1 256425096 8362321 complement(7739548..7740567) 1 NC_013132.1 hypothetical protein 7740567 8362321 Cpin_6139 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125749.1 7739548 R 485918 CDS YP_003125750.1 256425097 8362322 complement(7740591..7740839) 1 NC_013132.1 hypothetical protein 7740839 8362322 Cpin_6140 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125750.1 7740591 R 485918 CDS YP_003125751.1 256425098 8362323 complement(7740960..7741733) 1 NC_013132.1 PFAM: Protein of unknown function DUF1963; KEGG: cco:CCC13826_0556 peptide methionine sulfoxide reductase MsrA/MsrB; hypothetical protein 7741733 8362323 Cpin_6141 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125751.1 7740960 R 485918 CDS YP_003125752.1 256425099 8362325 complement(7742125..7742943) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mll2196 short chain oxidoreductase; short-chain dehydrogenase/reductase SDR 7742943 8362325 Cpin_6143 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125752.1 7742125 R 485918 CDS YP_003125753.1 256425100 8362326 7743459..7745045 1 NC_013132.1 PFAM: leucine-rich repeat protein; SMART: leucine-rich repeat-containing protein typical subtype; KEGG: hypothetical protein; hypothetical protein 7745045 8362326 Cpin_6144 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125753.1 7743459 D 485918 CDS YP_003125754.1 256425101 8362327 complement(7745076..7746218) 1 NC_013132.1 KEGG: mmr:Mmar10_1592 peptidase S15; peptidase S15 7746218 8362327 Cpin_6145 Chitinophaga pinensis DSM 2588 peptidase S15 YP_003125754.1 7745076 R 485918 CDS YP_003125755.1 256425102 8362328 complement(7746246..7748213) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bcb:BCB4264_A3720 AhpC/TSA family protein; alkyl hydroperoxide reductase 7748213 8362328 Cpin_6146 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003125755.1 7746246 R 485918 CDS YP_003125756.1 256425103 8362329 complement(7748245..7749624) 1 NC_013132.1 hypothetical protein 7749624 8362329 Cpin_6147 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125756.1 7748245 R 485918 CDS YP_003125757.1 256425104 8362330 complement(7749641..7753297) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7753297 8362330 Cpin_6148 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125757.1 7749641 R 485918 CDS YP_003125758.1 256425105 8362331 complement(7753347..7754369) 1 NC_013132.1 PFAM: FecR protein; KEGG: atc:AGR_L_2871 hypothetical protein; anti-FecI sigma factor FecR 7754369 8362331 Cpin_6149 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003125758.1 7753347 R 485918 CDS YP_003125759.1 256425106 8362332 complement(7754523..7755095) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bbt:BBta_0709 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 7755095 8362332 Cpin_6150 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125759.1 7754523 R 485918 CDS YP_003125760.1 256425107 8362333 complement(7755221..7755802) 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: mmw:Mmwyl1_1170 NUDIX hydrolase; NUDIX hydrolase 7755802 8362333 Cpin_6151 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003125760.1 7755221 R 485918 CDS YP_003125761.1 256425108 8362334 complement(7755850..7756950) 1 NC_013132.1 hypothetical protein 7756950 8362334 Cpin_6152 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125761.1 7755850 R 485918 CDS YP_003125762.1 256425109 8362335 complement(7757155..7759593) 1 NC_013132.1 KEGG: sus:Acid_7167 hypothetical protein; hypothetical protein 7759593 8362335 Cpin_6153 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125762.1 7757155 R 485918 CDS YP_003125763.1 256425110 8362336 complement(7759625..7761055) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 7761055 8362336 Cpin_6154 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125763.1 7759625 R 485918 CDS YP_003125764.1 256425111 8362337 complement(7761074..7764763) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7764763 8362337 Cpin_6155 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125764.1 7761074 R 485918 CDS YP_003125765.1 256425112 8362338 complement(7764935..7766110) 1 NC_013132.1 PFAM: FecR protein; KEGG: nwi:Nwi_3080 FecR protein; anti-FecI sigma factor FecR 7766110 8362338 Cpin_6156 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003125765.1 7764935 R 485918 CDS YP_003125766.1 256425113 8362339 complement(7766203..7766769) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ilo:IL1936 DNA-directed RNA polymerase specialized sigma subunit; ECF subfamily RNA polymerase sigma-24 subunit 7766769 8362339 Cpin_6157 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125766.1 7766203 R 485918 CDS YP_003125767.1 256425114 8362340 7766868..7767992 1 NC_013132.1 PFAM: glycosidase PH1107-related; glycosyl hydrolase family 32 domain protein; KEGG: sus:Acid_4608 glycosidase, PH1107-related; glycosidase PH1107-like protein 7767992 8362340 Cpin_6158 Chitinophaga pinensis DSM 2588 glycosidase PH1107-like protein YP_003125767.1 7766868 D 485918 CDS YP_003125768.1 256425115 8362341 complement(7768162..7769685) 1 NC_013132.1 KEGG: cja:CJA_0819 alpha-L-arabinfuranosidase, , abf43M; PFAM: glycoside hydrolase family 43; Ricin B lectin; SMART: Ricin B lectin; alpha-N-arabinofuranosidase 7769685 8362341 Cpin_6159 Chitinophaga pinensis DSM 2588 alpha-N-arabinofuranosidase YP_003125768.1 7768162 R 485918 CDS YP_003125769.1 256425116 8362342 7769982..7770206 1 NC_013132.1 KEGG: mgm:Mmc1_1210 ADP-ribosyl-(dinitrogen reductase) hydrolase; hypothetical protein 7770206 8362342 Cpin_6160 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125769.1 7769982 D 485918 CDS YP_003125770.1 256425117 8362343 complement(7770228..7770785) 1 NC_013132.1 hypothetical protein 7770785 8362343 Cpin_6161 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125770.1 7770228 R 485918 CDS YP_003125771.1 256425118 8362344 7770986..7772287 1 NC_013132.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; sulfatase; KEGG: bcb:BCB4264_A0459 type I phosphodiesterase/nucleotide pyrophosphatase family protein; type I phosphodiesterase/nucleotide pyrophosphatase 7772287 8362344 Cpin_6162 Chitinophaga pinensis DSM 2588 type I phosphodiesterase/nucleotide pyrophosphatase YP_003125771.1 7770986 D 485918 CDS YP_003125772.1 256425119 8362345 complement(7772385..7773092) 1 NC_013132.1 KEGG: vsp:VS_0240 hypothetical protein; hypothetical protein 7773092 8362345 Cpin_6163 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125772.1 7772385 R 485918 CDS YP_003125773.1 256425120 8362346 complement(7773233..7773703) 1 NC_013132.1 hypothetical protein 7773703 8362346 Cpin_6164 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125773.1 7773233 R 485918 CDS YP_003125774.1 256425121 8362347 complement(7773982..7778175) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; helix- turn-helix- domain containing protein AraC type; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; histidine kinase A domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein; histidine kinase 7778175 8362347 Cpin_6165 Chitinophaga pinensis DSM 2588 histidine kinase YP_003125774.1 7773982 R 485918 CDS YP_003125775.1 256425122 8362348 7778294..7781227 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 7781227 8362348 Cpin_6166 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125775.1 7778294 D 485918 CDS YP_003125776.1 256425123 8362349 7781245..7782837 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 7782837 8362349 Cpin_6167 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125776.1 7781245 D 485918 CDS YP_003125777.1 256425124 8362350 7782862..7783920 1 NC_013132.1 KEGG: gur:Gura_0762 hypothetical protein; hypothetical protein 7783920 8362350 Cpin_6168 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125777.1 7782862 D 485918 CDS YP_003125778.1 256425125 8362351 7783935..7784963 1 NC_013132.1 PFAM: glycosyl hydrolase 53 domain protein; KEGG: asa:ASA_2386 arabinogalactan endo-1,4-beta- galactosidase; arabinogalactan endo-1,4-beta-galactosidase 7784963 8362351 Cpin_6169 Chitinophaga pinensis DSM 2588 arabinogalactan endo-1,4-beta-galactosidase YP_003125778.1 7783935 D 485918 CDS YP_003125779.1 256425126 8362352 7785284..7787818 1 NC_013132.1 KEGG: sbm:Shew185_3333 membrane or secreted protein; membrane or secreted protein 7787818 8362352 Cpin_6170 Chitinophaga pinensis DSM 2588 membrane or secreted protein YP_003125779.1 7785284 D 485918 CDS YP_003125780.1 256425127 8362353 7787822..7790263 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: beta-galactosidase; glycoside hydrolase 7790263 8362353 Cpin_6171 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125780.1 7787822 D 485918 CDS YP_003125781.1 256425128 8362354 complement(7790311..7791435) 1 NC_013132.1 hypothetical protein 7791435 8362354 Cpin_6172 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125781.1 7790311 R 485918 CDS YP_003125782.1 256425129 8362355 complement(7791580..7793424) 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein; glycoside hydrolase 7793424 8362355 Cpin_6173 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003125782.1 7791580 R 485918 CDS YP_003125783.1 256425130 8362356 7793567..7794187 1 NC_013132.1 hypothetical protein 7794187 8362356 Cpin_6174 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125783.1 7793567 D 485918 CDS YP_003125784.1 256425131 8362357 complement(7794241..7794999) 1 NC_013132.1 KEGG: xcc:XCC2029 hypothetical protein; hypothetical protein 7794999 8362357 Cpin_6175 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125784.1 7794241 R 485918 CDS YP_003125785.1 256425132 8362358 7795108..7795968 1 NC_013132.1 PFAM: beta-lactamase; KEGG: sus:Acid_4466 beta-lactamase; beta-lactamase 7795968 8362358 Cpin_6176 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003125785.1 7795108 D 485918 CDS YP_003125786.1 256425133 8362359 complement(7796170..7796979) 1 NC_013132.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vpa:VP1699 transcriptional regulator ExsA; AraC family transcriptional regulator 7796979 8362359 Cpin_6177 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125786.1 7796170 R 485918 CDS YP_003125787.1 256425134 8362360 complement(7797023..7797994) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: rpc:RPC_0451 aldo/keto reductase; aldo/keto reductase 7797994 8362360 Cpin_6178 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003125787.1 7797023 R 485918 CDS YP_003125788.1 256425135 8362363 complement(7798699..7798947) 1 NC_013132.1 hypothetical protein 7798947 8362363 Cpin_6181 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125788.1 7798699 R 485918 CDS YP_003125789.1 256425136 8362364 7799092..7799907 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: swi:Swit_1374 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 7799907 8362364 Cpin_6182 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125789.1 7799092 D 485918 CDS YP_003125790.1 256425137 8362365 7799930..7800838 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 7800838 8362365 Cpin_6183 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125790.1 7799930 D 485918 CDS YP_003125791.1 256425138 8362366 complement(7801132..7801884) 1 NC_013132.1 KEGG: mxa:MXAN_2791 protease B; hypothetical protein 7801884 8362366 Cpin_6184 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125791.1 7801132 R 485918 CDS YP_003125792.1 256425139 8362367 complement(7802278..7803588) 1 NC_013132.1 KEGG: shw:Sputw3181_3567 MORN repeat-containing protein; hypothetical protein 7803588 8362367 Cpin_6185 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125792.1 7802278 R 485918 CDS YP_003125793.1 256425140 8362368 complement(7803778..7804518) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2727 hypothetical protein; short-chain dehydrogenase/reductase SDR 7804518 8362368 Cpin_6186 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125793.1 7803778 R 485918 CDS YP_003125794.1 256425141 8362369 7804620..7805195 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 7805195 8362369 Cpin_6187 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003125794.1 7804620 D 485918 CDS YP_003125795.1 256425142 8362370 7805294..7806037 1 NC_013132.1 hypothetical protein 7806037 8362370 Cpin_6188 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125795.1 7805294 D 485918 CDS YP_003125796.1 256425143 8362371 7806138..7806893 1 NC_013132.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: cbu:CBU_1928 acyl-CoA synthetase; phospholipid/glycerol acyltransferase 7806893 8362371 Cpin_6189 Chitinophaga pinensis DSM 2588 phospholipid/glycerol acyltransferase YP_003125796.1 7806138 D 485918 CDS YP_003125797.1 256425144 8362372 complement(7806992..7809772) 1 NC_013132.1 KEGG: pfo:Pfl01_5132 organic solvent tolerance protein; organic solvent tolerance protein OstA 7809772 8362372 Cpin_6190 Chitinophaga pinensis DSM 2588 organic solvent tolerance protein OstA YP_003125797.1 7806992 R 485918 CDS YP_003125798.1 256425145 8362373 7809977..7811647 1 NC_013132.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: mxa:MXAN_3886 N-acetylmuramoyl-L-alanine amidase domain protein; cell wall hydrolase/autolysin 7811647 8362373 Cpin_6191 Chitinophaga pinensis DSM 2588 cell wall hydrolase/autolysin YP_003125798.1 7809977 D 485918 CDS YP_003125799.1 256425146 8362374 7811866..7812864 1 NC_013132.1 PFAM: hypothetical protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component; organic solvent ABC transporter perimplasmic protein 7812864 8362374 Cpin_6192 Chitinophaga pinensis DSM 2588 organic solvent ABC transporter perimplasmic protein YP_003125799.1 7811866 D 485918 CDS YP_003125800.1 256425147 8362375 7812873..7815002 1 NC_013132.1 PFAM: OstA family protein; protein of unknown function DUF1239; hypothetical protein 7815002 8362375 Cpin_6193 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125800.1 7812873 D 485918 CDS YP_003125801.1 256425148 8362376 7814999..7816138 1 NC_013132.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; KEGG: ent:Ent638_0580 pH-dependent sodium/proton antiporter; Na+/H+ antiporter NhaA 7816138 8362376 Cpin_6194 Chitinophaga pinensis DSM 2588 Na+/H+ antiporter NhaA YP_003125801.1 7814999 D 485918 CDS YP_003125802.1 256425149 8362377 7816209..7816664 1 NC_013132.1 hypothetical protein 7816664 8362377 Cpin_6195 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125802.1 7816209 D 485918 CDS YP_003125803.1 256425150 8362378 7816708..7817232 1 NC_013132.1 hypothetical protein 7817232 8362378 Cpin_6196 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125803.1 7816708 D 485918 CDS YP_003125804.1 256425151 8362379 7817337..7818881 1 NC_013132.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: gsu:GSU1802 YjeF family protein; carbohydrate kinase 7818881 8362379 Cpin_6197 Chitinophaga pinensis DSM 2588 carbohydrate kinase YP_003125804.1 7817337 D 485918 CDS YP_003125805.1 256425152 8362380 7818971..7821232 1 NC_013132.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 7821232 hppA 8362380 hppA Chitinophaga pinensis DSM 2588 membrane-bound proton-translocating pyrophosphatase YP_003125805.1 7818971 D 485918 CDS YP_003125806.1 256425153 8362381 complement(7821731..7822732) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce1536 AraC family transcriptional regulator; AraC family transcriptional regulator 7822732 8362381 Cpin_6199 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125806.1 7821731 R 485918 CDS YP_003125807.1 256425154 8362382 7822839..7823054 1 NC_013132.1 hypothetical protein 7823054 8362382 Cpin_6200 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125807.1 7822839 D 485918 CDS YP_003125808.1 256425155 8362383 7823175..7825553 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor plug 7825553 8362383 Cpin_6201 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003125808.1 7823175 D 485918 CDS YP_003125809.1 256425156 8362384 7825577..7826443 1 NC_013132.1 hypothetical protein 7826443 8362384 Cpin_6202 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125809.1 7825577 D 485918 CDS YP_003125810.1 256425157 8362385 7826521..7827147 1 NC_013132.1 hypothetical protein 7827147 8362385 Cpin_6203 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125810.1 7826521 D 485918 CDS YP_003125811.1 256425158 8362386 7827717..7828109 1 NC_013132.1 PFAM: Penicillinase repressor; KEGG: mxa:MXAN_4242 transcriptional regulator; CopY family transcriptional regulator 7828109 8362386 Cpin_6204 Chitinophaga pinensis DSM 2588 CopY family transcriptional regulator YP_003125811.1 7827717 D 485918 CDS YP_003125812.1 256425159 8362387 7828144..7830159 1 NC_013132.1 PFAM: peptidase M56 BlaR1; KEGG: sus:Acid_0899 peptidase M56, BlaR1; peptidase M56 BlaR1 7830159 8362387 Cpin_6205 Chitinophaga pinensis DSM 2588 peptidase M56 BlaR1 YP_003125812.1 7828144 D 485918 CDS YP_003125813.1 256425160 8362388 7830265..7831395 1 NC_013132.1 PFAM: peptidase C1B bleomycin hydrolase; KEGG: hypothetical protein; K01372 bleomycin hydrolase; peptidase C1B bleomycin hydrolase 7831395 8362388 Cpin_6206 Chitinophaga pinensis DSM 2588 peptidase C1B bleomycin hydrolase YP_003125813.1 7830265 D 485918 CDS YP_003125814.1 256425161 8362389 complement(7831689..7831964) 1 NC_013132.1 PFAM: acylphosphatase; KEGG: mca:MCA0713 acylphosphatase; acylphosphatase 7831964 8362389 Cpin_6207 Chitinophaga pinensis DSM 2588 acylphosphatase YP_003125814.1 7831689 R 485918 CDS YP_003125815.1 256425162 8362390 complement(7832299..7832907) 1 NC_013132.1 2'-5' RNA ligase 7832907 8362390 Cpin_6208 Chitinophaga pinensis DSM 2588 2'-5' RNA ligase YP_003125815.1 7832299 R 485918 CDS YP_003125816.1 256425163 8362391 complement(7833286..7834014) 1 NC_013132.1 TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: hypothetical protein; K01803 triosephosphate isomerase (TIM); triosephosphate isomerase 7834014 8362391 Cpin_6209 Chitinophaga pinensis DSM 2588 triosephosphate isomerase YP_003125816.1 7833286 R 485918 CDS YP_003125817.1 256425164 8362392 complement(7834081..7835250) 1 NC_013132.1 KEGG: dps:DP2923 bifunctional GlmU protein; hypothetical protein 7835250 8362392 Cpin_6210 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125817.1 7834081 R 485918 CDS YP_003125818.1 256425165 8362393 complement(7835319..7835570) 1 NC_013132.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: sml:Smlt3836 50S ribosomal protein L31; 50S ribosomal protein L31 7835570 8362393 Cpin_6211 Chitinophaga pinensis DSM 2588 50S ribosomal protein L31 YP_003125818.1 7835319 R 485918 CDS YP_003125819.1 256425166 8362394 complement(7835726..7836217) 1 NC_013132.1 PFAM: protein of unknown function DUF520; KEGG: dde:Dde_2479 nucleotide-binding protein; hypothetical protein 7836217 8362394 Cpin_6212 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125819.1 7835726 R 485918 CDS YP_003125820.1 256425167 8362395 complement(7836379..7837113) 1 NC_013132.1 KEGG: cbs:COXBURSA331_A0507 lipoprotein; lipoprotein 7837113 8362395 Cpin_6213 Chitinophaga pinensis DSM 2588 lipoprotein YP_003125820.1 7836379 R 485918 CDS YP_003125821.1 256425168 8362396 complement(7837157..7838242) 1 NC_013132.1 KEGG: ATP-dependent heat shock protein; K03667 ATP- dependent HslUV protease ATP-binding subunit HslU; hypothetical protein 7838242 8362396 Cpin_6214 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125821.1 7837157 R 485918 CDS YP_003125822.1 256425169 8362397 complement(7838226..7838777) 1 NC_013132.1 hypothetical protein 7838777 8362397 Cpin_6215 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125822.1 7838226 R 485918 CDS YP_003125823.1 256425170 8362398 complement(7838777..7839343) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_2486 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 7839343 8362398 Cpin_6216 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125823.1 7838777 R 485918 CDS YP_003125824.1 256425171 8362399 complement(7839611..7842073) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0815 TonB-dependent receptor; TonB-dependent receptor 7842073 8362399 Cpin_6217 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125824.1 7839611 R 485918 CDS YP_003125825.1 256425172 8362400 complement(7842369..7842800) 1 NC_013132.1 PFAM: hemerythrin HHE cation binding domain protein; KEGG: sus:Acid_5579 hemerythrin HHE cation binding domain-containing protein; hemerythrin HHE cation binding domain-containing protein 7842800 8362400 Cpin_6218 Chitinophaga pinensis DSM 2588 hemerythrin HHE cation binding domain-containing protein YP_003125825.1 7842369 R 485918 CDS YP_003125826.1 256425173 8362401 complement(7842805..7844103) 1 NC_013132.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mxa:MXAN_0370 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 7844103 8362401 Cpin_6219 Chitinophaga pinensis DSM 2588 prolipoprotein diacylglyceryl transferase YP_003125826.1 7842805 R 485918 CDS YP_003125827.1 256425174 8362402 complement(7844285..7844698) 1 NC_013132.1 PFAM: protein of unknown function DUF1094; KEGG: bha:BH1716 hypothetical protein; hypothetical protein 7844698 8362402 Cpin_6220 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125827.1 7844285 R 485918 CDS YP_003125828.1 256425175 8362403 7844929..7845384 1 NC_013132.1 PFAM: heat shock protein Hsp20; KEGG: aba:Acid345_4766 heat shock protein HSP20; heat shock protein Hsp20 7845384 8362403 Cpin_6221 Chitinophaga pinensis DSM 2588 heat shock protein Hsp20 YP_003125828.1 7844929 D 485918 CDS YP_003125829.1 256425176 8362404 7845533..7846372 1 NC_013132.1 KEGG: rfe:RF_0391 major facilitator superfamily permease; hypothetical protein 7846372 8362404 Cpin_6222 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125829.1 7845533 D 485918 CDS YP_003125830.1 256425177 8362405 complement(7846733..7848130) 1 NC_013132.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: ftm:FTM_0587 arginine decarboxylase; Orn/DAP/Arg decarboxylase 2 7848130 8362405 Cpin_6223 Chitinophaga pinensis DSM 2588 Orn/DAP/Arg decarboxylase 2 YP_003125830.1 7846733 R 485918 CDS YP_003125831.1 256425178 8362406 complement(7848361..7848993) 1 NC_013132.1 PFAM: WbqC-like family protein; KEGG: bur:Bcep18194_A3335 hypothetical protein; WbqC-like family protein 7848993 8362406 Cpin_6224 Chitinophaga pinensis DSM 2588 WbqC-like family protein YP_003125831.1 7848361 R 485918 CDS YP_003125832.1 256425179 8362407 7849333..7849788 1 NC_013132.1 KEGG: pca:Pcar_0619 hypothetical protein; hypothetical protein 7849788 8362407 Cpin_6225 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125832.1 7849333 D 485918 CDS YP_003125833.1 256425180 8362408 complement(7849867..7850238) 1 NC_013132.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bcr:BCAH187_A3779 heavy metal-transporting ATPase; heavy metal transport/detoxification protein 7850238 8362408 Cpin_6226 Chitinophaga pinensis DSM 2588 heavy metal transport/detoxification protein YP_003125833.1 7849867 R 485918 CDS YP_003125834.1 256425181 8362409 complement(7850308..7850955) 1 NC_013132.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: bsu:BSU15560 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 7850955 8362409 Cpin_6227 Chitinophaga pinensis DSM 2588 orotate phosphoribosyltransferase YP_003125834.1 7850308 R 485918 CDS YP_003125835.1 256425182 8362410 7850995..7851621 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: GM22565 gene product from transcript GM22565- RA; NUDIX hydrolase 7851621 8362410 Cpin_6228 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003125835.1 7850995 D 485918 CDS YP_003125836.1 256425183 8362411 complement(7851650..7852084) 1 NC_013132.1 PFAM: thioesterase superfamily protein; KEGG: ppd:Ppro_2603 hypothetical protein; thioesterase superfamily protein 7852084 8362411 Cpin_6229 Chitinophaga pinensis DSM 2588 thioesterase superfamily protein YP_003125836.1 7851650 R 485918 CDS YP_003125837.1 256425184 8362412 complement(7852115..7852585) 1 NC_013132.1 KEGG: bcy:Bcer98_2632 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 7852585 8362412 Cpin_6230 Chitinophaga pinensis DSM 2588 pantetheine-phosphate adenylyltransferase YP_003125837.1 7852115 R 485918 CDS YP_003125838.1 256425185 8362413 complement(7852592..7853143) 1 NC_013132.1 PFAM: Protein of unknown function methylase KEGG: ppd:Ppro_2191 methyltransferase; hypothetical protein 7853143 8362413 Cpin_6231 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125838.1 7852592 R 485918 CDS YP_003125839.1 256425186 8362414 complement(7853134..7854009) 1 NC_013132.1 hypothetical protein 7854009 8362414 Cpin_6232 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125839.1 7853134 R 485918 CDS YP_003125840.1 256425187 8362415 7854065..7855396 1 NC_013132.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dde:Dde_2418 MATE efflux family protein; MATE efflux family protein 7855396 8362415 Cpin_6233 Chitinophaga pinensis DSM 2588 MATE efflux family protein YP_003125840.1 7854065 D 485918 CDS YP_003125841.1 256425188 8362416 complement(7855399..7856154) 1 NC_013132.1 KEGG: AGAP012364-PA; hypothetical protein 7856154 8362416 Cpin_6234 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125841.1 7855399 R 485918 CDS YP_003125842.1 256425189 8362417 complement(7856262..7856612) 1 NC_013132.1 PFAM: dihydroneopterin aldolase; KEGG: mlo:mll0787 dihydroneopterin aldolase; dihydroneopterin aldolase 7856612 8362417 Cpin_6235 Chitinophaga pinensis DSM 2588 dihydroneopterin aldolase YP_003125842.1 7856262 R 485918 CDS YP_003125843.1 256425190 8362418 complement(7856839..7857783) 1 NC_013132.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gbe:GbCGDNIH1_0720 thioredoxin reductase; thioredoxin reductase 7857783 8362418 Cpin_6236 Chitinophaga pinensis DSM 2588 thioredoxin reductase YP_003125843.1 7856839 R 485918 CDS YP_003125844.1 256425191 8362419 complement(7858025..7858882) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD; RpoD subfamily RNA polymerase sigma-70 subunit 7858882 8362419 Cpin_6237 Chitinophaga pinensis DSM 2588 RpoD subfamily RNA polymerase sigma-70 subunit YP_003125844.1 7858025 R 485918 CDS YP_003125845.1 256425192 8362420 7859209..7860231 1 NC_013132.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: threonine aldolase family protein; threonine aldolase 7860231 8362420 Cpin_6238 Chitinophaga pinensis DSM 2588 threonine aldolase YP_003125845.1 7859209 D 485918 CDS YP_003125846.1 256425193 8362421 7860761..7863406 1 NC_013132.1 TIGRFAM: valyl-tRNA synthetase; KEGG: bsu:BSU28090 valyl-tRNA synthetase; valyl-tRNA synthetase 7863406 8362421 Cpin_6239 Chitinophaga pinensis DSM 2588 valyl-tRNA synthetase YP_003125846.1 7860761 D 485918 CDS YP_003125847.1 256425194 8362422 7863506..7863967 1 NC_013132.1 hypothetical protein 7863967 8362422 Cpin_6240 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125847.1 7863506 D 485918 CDS YP_003125848.1 256425195 8362423 complement(7863964..7866723) 1 NC_013132.1 KEGG: bba:Bd1448 hypothetical protein; hypothetical protein 7866723 8362423 Cpin_6241 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125848.1 7863964 R 485918 CDS YP_003125849.1 256425196 8362424 complement(7867065..7868513) 1 NC_013132.1 KEGG: psa:PST_3559 L-serine dehydratase, iron- sulfur-dependent, single chain form; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 7868513 8362424 Cpin_6242 Chitinophaga pinensis DSM 2588 L-serine dehydratase 1 YP_003125849.1 7867065 R 485918 CDS YP_003125850.1 256425197 8362425 complement(7868853..7869365) 1 NC_013132.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: asu:Asuc_0679 peptidylprolyl isomerase FKBP- type; FKBP-type peptidylprolyl isomerase 7869365 8362425 Cpin_6243 Chitinophaga pinensis DSM 2588 FKBP-type peptidylprolyl isomerase YP_003125850.1 7868853 R 485918 CDS YP_003125851.1 256425198 8362426 complement(7869409..7869915) 1 NC_013132.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bas:BUsg514 FKBP-type peptidyl-prolyl cis- trans isomerase FkpA precursor; FKBP-type peptidylprolyl isomerase 7869915 8362426 Cpin_6244 Chitinophaga pinensis DSM 2588 FKBP-type peptidylprolyl isomerase YP_003125851.1 7869409 R 485918 CDS YP_003125852.1 256425199 8362427 complement(7870023..7871657) 1 NC_013132.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: dvl:Dvul_1196 chaperonin GroEL; chaperonin GroEL 7871657 8362427 Cpin_6245 Chitinophaga pinensis DSM 2588 chaperonin GroEL YP_003125852.1 7870023 R 485918 CDS YP_003125853.1 256425200 8362428 complement(7871717..7871998) 1 NC_013132.1 PFAM: chaperonin Cpn10; KEGG: nwi:Nwi_2191 co-chaperonin GroES; chaperonin Cpn10 7871998 8362428 Cpin_6246 Chitinophaga pinensis DSM 2588 chaperonin Cpn10 YP_003125853.1 7871717 R 485918 CDS YP_003125854.1 256425201 8362429 7872389..7873318 1 NC_013132.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: dal:Dalk_3316 NusB antitermination factor; NusB antitermination factor 7873318 8362429 Cpin_6247 Chitinophaga pinensis DSM 2588 NusB antitermination factor YP_003125854.1 7872389 D 485918 CDS YP_003125855.1 256425202 8362430 7873347..7873790 1 NC_013132.1 PFAM: protein of unknown function DUF1573; KEGG: gme:Gmet_1031 hypothetical protein; hypothetical protein 7873790 8362430 Cpin_6248 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125855.1 7873347 D 485918 CDS YP_003125856.1 256425203 8362431 7873821..7874174 1 NC_013132.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: yajC; preprotein tranlocase protein; K03210 preprotein translocase YajC subunit; preprotein translocase subunit YajC 7874174 8362431 Cpin_6249 Chitinophaga pinensis DSM 2588 preprotein translocase subunit YajC YP_003125856.1 7873821 D 485918 CDS YP_003125857.1 256425204 8362432 7874245..7874841 1 NC_013132.1 KEGG: apa:APP7_0935 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 7874841 8362432 Cpin_6250 Chitinophaga pinensis DSM 2588 dephospho-CoA kinase YP_003125857.1 7874245 D 485918 CDS YP_003125858.1 256425205 8362433 7875164..7878043 1 NC_013132.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dvl:Dvul_1144 SNF2-related protein; SNF2-like protein 7878043 8362433 Cpin_6251 Chitinophaga pinensis DSM 2588 SNF2-like protein YP_003125858.1 7875164 D 485918 CDS YP_003125859.1 256425206 8362434 7878142..7879254 1 NC_013132.1 PFAM: glycoside hydrolase family 5; KEGG: aba:Acid345_1689 glycoside hydrolase, family 5; cellulase 7879254 8362434 Cpin_6252 Chitinophaga pinensis DSM 2588 cellulase YP_003125859.1 7878142 D 485918 CDS YP_003125860.1 256425207 8362435 complement(7879305..7879628) 1 NC_013132.1 hypothetical protein 7879628 8362435 Cpin_6253 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125860.1 7879305 R 485918 CDS YP_003125861.1 256425208 8362436 complement(7879917..7883084) 1 NC_013132.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 7883084 8362436 Cpin_6254 Chitinophaga pinensis DSM 2588 bifunctional preprotein translocase subunit SecD/SecF YP_003125861.1 7879917 R 485918 CDS YP_003125862.1 256425209 8362437 7883241..7884518 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 7884518 8362437 Cpin_6255 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125862.1 7883241 D 485918 CDS YP_003125863.1 256425210 8362438 7884556..7885272 1 NC_013132.1 KEGG: bcj:BCAM1137 lipoprotein; hypothetical protein 7885272 8362438 Cpin_6256 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125863.1 7884556 D 485918 CDS YP_003125864.1 256425211 8362439 7885461..7886660 1 NC_013132.1 PFAM: aminotransferase class I and II; KEGG: mfa:Mfla_1319 aminotransferase; class I and II aminotransferase 7886660 8362439 Cpin_6257 Chitinophaga pinensis DSM 2588 class I and II aminotransferase YP_003125864.1 7885461 D 485918 CDS YP_003125865.1 256425212 8362440 7886840..7887376 1 NC_013132.1 hypothetical protein 7887376 8362440 Cpin_6258 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125865.1 7886840 D 485918 CDS YP_003125866.1 256425213 8362441 complement(7887381..7888307) 1 NC_013132.1 PFAM: peptidase M23; KEGG: gbm:Gbem_3591 peptidase M23B; peptidase M23 7888307 8362441 Cpin_6259 Chitinophaga pinensis DSM 2588 peptidase M23 YP_003125866.1 7887381 R 485918 CDS YP_003125867.1 256425214 8362442 7888422..7889975 1 NC_013132.1 KEGG: gur:Gura_0654 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 7889975 8362442 Cpin_6260 Chitinophaga pinensis DSM 2588 methylmalonyl-CoA mutase large subunit YP_003125867.1 7888422 D 485918 CDS YP_003125868.1 256425215 8362443 7890042..7890938 1 NC_013132.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: gbm:Gbem_1111 methyltransferase type 12; type 12 methyltransferase 7890938 8362443 Cpin_6261 Chitinophaga pinensis DSM 2588 type 12 methyltransferase YP_003125868.1 7890042 D 485918 CDS YP_003125869.1 256425216 8362444 complement(7891172..7892005) 1 NC_013132.1 KEGG: mxa:MXAN_2791 protease B; protease B 7892005 8362444 Cpin_6262 Chitinophaga pinensis DSM 2588 protease B YP_003125869.1 7891172 R 485918 CDS YP_003125870.1 256425217 8362445 complement(7892915..7894321) 1 NC_013132.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: nar:Saro_1945 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 7894321 8362445 Cpin_6263 Chitinophaga pinensis DSM 2588 dihydrolipoamide dehydrogenase YP_003125870.1 7892915 R 485918 CDS YP_003125871.1 256425218 8362446 complement(7894431..7895108) 1 NC_013132.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: eca:ECA2646 outer-membrane lipoprotein carrier protein; outer membrane lipoprotein carrier protein LolA 7895108 8362446 Cpin_6264 Chitinophaga pinensis DSM 2588 outer membrane lipoprotein carrier protein LolA YP_003125871.1 7894431 R 485918 CDS YP_003125872.1 256425219 8362447 complement(7895201..7897843) 1 NC_013132.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bcb:BCB4264_A3893 stage III sporulation protein E; cell division protein FtsK 7897843 8362447 Cpin_6265 Chitinophaga pinensis DSM 2588 cell division protein FtsK YP_003125872.1 7895201 R 485918 CDS YP_003125873.1 256425220 8362448 complement(7898102..7899499) 1 NC_013132.1 PFAM: peptidase S15; KEGG: mmr:Mmar10_1592 peptidase S15; peptidase S15 7899499 8362448 Cpin_6266 Chitinophaga pinensis DSM 2588 peptidase S15 YP_003125873.1 7898102 R 485918 CDS YP_003125874.1 256425221 8362449 complement(7899655..7900050) 1 NC_013132.1 PFAM: protein of unknown function DUF423; KEGG: ppw:PputW619_0359 hypothetical protein; hypothetical protein 7900050 8362449 Cpin_6267 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125874.1 7899655 R 485918 CDS YP_003125875.1 256425222 8362450 complement(7900414..7900926) 1 NC_013132.1 PFAM: shikimate kinase; KEGG: gur:Gura_1819 shikimate kinase; shikimate kinase 7900926 8362450 Cpin_6268 Chitinophaga pinensis DSM 2588 shikimate kinase YP_003125875.1 7900414 R 485918 CDS YP_003125876.1 256425223 8362451 complement(7900945..7901613) 1 NC_013132.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: rso:RSc1804 hypothetical protein; 4'-phosphopantetheinyl transferase 7901613 8362451 Cpin_6269 Chitinophaga pinensis DSM 2588 4'-phosphopantetheinyl transferase YP_003125876.1 7900945 R 485918 CDS YP_003125877.1 256425224 8362452 7901701..7902237 1 NC_013132.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 7902237 dcd 8362452 dcd Chitinophaga pinensis DSM 2588 deoxycytidine triphosphate deaminase YP_003125877.1 7901701 D 485918 CDS YP_003125878.1 256425225 8362453 complement(7902561..7904552) 1 NC_013132.1 PFAM: cytochrome C class I; KEGG: cvi:CV_0175 cytochrome C transmembrane protein; cytochrome C class I 7904552 8362453 Cpin_6271 Chitinophaga pinensis DSM 2588 cytochrome C class I YP_003125878.1 7902561 R 485918 CDS YP_003125879.1 256425226 8362454 complement(7904571..7906019) 1 NC_013132.1 PFAM: protein of unknown function DUF1080; KEGG: amc:MADE_00436 multi-domain protein; hypothetical protein 7906019 8362454 Cpin_6272 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125879.1 7904571 R 485918 CDS YP_003125880.1 256425227 8362455 7906247..7908457 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: scl:sce0927 TonB-dependent receptor; TonB-dependent receptor 7908457 8362455 Cpin_6273 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125880.1 7906247 D 485918 CDS YP_003125881.1 256425228 8362456 complement(7908530..7909447) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 7909447 8362456 Cpin_6274 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125881.1 7908530 R 485918 CDS YP_003125882.1 256425229 8362457 complement(7909454..7910362) 1 NC_013132.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NmrA family protein; KEGG: bac:BamMC406_3548 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 7910362 8362457 Cpin_6275 Chitinophaga pinensis DSM 2588 NAD-dependent epimerase/dehydratase YP_003125882.1 7909454 R 485918 CDS YP_003125883.1 256425230 8362458 complement(7910450..7911610) 1 NC_013132.1 KEGG: sus:Acid_1939 hypothetical protein; hypothetical protein 7911610 8362458 Cpin_6276 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125883.1 7910450 R 485918 CDS YP_003125884.1 256425231 8362459 complement(7911675..7912787) 1 NC_013132.1 KEGG: ecv:APECO1_3835 hypothetical protein; hypothetical protein 7912787 8362459 Cpin_6277 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125884.1 7911675 R 485918 CDS YP_003125885.1 256425232 8362461 7913688..7915013 1 NC_013132.1 KEGG: msl:Msil_0406 hypothetical protein; hypothetical protein 7915013 8362461 Cpin_6279 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125885.1 7913688 D 485918 CDS YP_003125886.1 256425233 8362462 complement(7914946..7916127) 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: xcb:XC_3949 acyltransferase; acyltransferase 3 7916127 8362462 Cpin_6280 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003125886.1 7914946 R 485918 CDS YP_003125887.1 256425234 8362463 complement(7916512..7917357) 1 NC_013132.1 PFAM: protein of unknown function DUF1080; KEGG: swi:Swit_1630 hypothetical protein; hypothetical protein 7917357 8362463 Cpin_6281 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125887.1 7916512 R 485918 CDS YP_003125888.1 256425235 8362464 7917501..7918154 1 NC_013132.1 KEGG: sbl:Sbal_0349 hypothetical protein; hypothetical protein 7918154 8362464 Cpin_6282 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125888.1 7917501 D 485918 CDS YP_003125889.1 256425236 8362465 7918314..7919036 1 NC_013132.1 PFAM: cyclase/dehydrase; KEGG: cyclase/dehydrase; cyclase/dehydrase 7919036 8362465 Cpin_6283 Chitinophaga pinensis DSM 2588 cyclase/dehydrase YP_003125889.1 7918314 D 485918 CDS YP_003125890.1 256425237 8362466 7919100..7919408 1 NC_013132.1 KEGG: afr:AFE_0362 hypothetical protein; hypothetical protein 7919408 8362466 Cpin_6284 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125890.1 7919100 D 485918 CDS YP_003125891.1 256425238 8362467 complement(7919502..7920815) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: sus:Acid_5733 redoxin domain-containing protein; alkyl hydroperoxide reductase 7920815 8362467 Cpin_6285 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003125891.1 7919502 R 485918 CDS YP_003125892.1 256425239 8362468 complement(7920819..7921178) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bba:Bd2520 lactoylglutathione lyase; bleomycin resistance protein 7921178 8362468 Cpin_6286 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003125892.1 7920819 R 485918 CDS YP_003125893.1 256425240 8362469 7921318..7922244 1 NC_013132.1 PFAM: Protein of unknown function DUF829, eukaryotic; KEGG: hch:HCH_00846 alpha/beta superfamily hydrolase/acyltransferase; hypothetical protein 7922244 8362469 Cpin_6287 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125893.1 7921318 D 485918 CDS YP_003125894.1 256425241 8362470 7922356..7922817 1 NC_013132.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: mxa:MXAN_5223 4-carboxymuconolactone decarboxylase domain protein; alkylhydroperoxidase 7922817 8362470 Cpin_6288 Chitinophaga pinensis DSM 2588 alkylhydroperoxidase YP_003125894.1 7922356 D 485918 CDS YP_003125895.1 256425242 8362471 7922857..7923699 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: bha:BH0672 RNA polymerase sigma factor SigJ; ECF subfamily RNA polymerase sigma-24 subunit 7923699 8362471 Cpin_6289 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125895.1 7922857 D 485918 CDS YP_003125896.1 256425243 8362472 complement(7923807..7924484) 1 NC_013132.1 PFAM: alanine racemase; KEGG: hypothetical protein; alanine racemase 7924484 8362472 Cpin_6290 Chitinophaga pinensis DSM 2588 alanine racemase YP_003125896.1 7923807 R 485918 CDS YP_003125897.1 256425244 8362473 complement(7924689..7925828) 1 NC_013132.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bha:BH3798 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 7925828 8362473 Cpin_6291 Chitinophaga pinensis DSM 2588 acyl-CoA dehydrogenase domain-containing protein YP_003125897.1 7924689 R 485918 CDS YP_003125898.1 256425245 8362474 7926091..7927038 1 NC_013132.1 PFAM: arginase/agmatinase/formiminoglutamase; KEGG: hypothetical protein; K01476 arginase; arginase/agmatinase/formiminoglutamase 7927038 8362474 Cpin_6292 Chitinophaga pinensis DSM 2588 arginase/agmatinase/formiminoglutamase YP_003125898.1 7926091 D 485918 CDS YP_003125899.1 256425246 8362475 complement(7927216..7929825) 1 NC_013132.1 KEGG: sus:Acid_7575 hypothetical protein; hypothetical protein 7929825 8362475 Cpin_6293 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125899.1 7927216 R 485918 CDS YP_003125900.1 256425247 8362476 complement(7929829..7930914) 1 NC_013132.1 hypothetical protein 7930914 8362476 Cpin_6294 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125900.1 7929829 R 485918 CDS YP_003125901.1 256425248 8362477 7930966..7931829 1 NC_013132.1 PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: eba:ebA6563 fructosamine kinase; fructosamine kinase 7931829 8362477 Cpin_6295 Chitinophaga pinensis DSM 2588 fructosamine kinase YP_003125901.1 7930966 D 485918 CDS YP_003125902.1 256425249 8362478 complement(7932055..7934076) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; multi-sensor hybrid histidine kinase 7934076 8362478 Cpin_6296 Chitinophaga pinensis DSM 2588 multi-sensor hybrid histidine kinase YP_003125902.1 7932055 R 485918 CDS YP_003125903.1 256425250 8362479 7934245..7934781 1 NC_013132.1 PFAM: protein of unknown function DUF177; hypothetical protein 7934781 8362479 Cpin_6297 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125903.1 7934245 D 485918 CDS YP_003125904.1 256425251 8362480 7934861..7935055 1 NC_013132.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: sml:Smlt1025 50S ribosomal protein L32; 50S ribosomal protein L32 7935055 8362480 Cpin_6298 Chitinophaga pinensis DSM 2588 50S ribosomal protein L32 YP_003125904.1 7934861 D 485918 CDS YP_003125905.1 256425252 8362481 7935101..7936042 1 NC_013132.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: bce:BC3851 glycerol-3-phosphate acyltransferase PlsX; fatty acid/phospholipid synthesis protein PlsX 7936042 8362481 Cpin_6299 Chitinophaga pinensis DSM 2588 fatty acid/phospholipid synthesis protein PlsX YP_003125905.1 7935101 D 485918 CDS YP_003125906.1 256425253 8362482 complement(7936328..7940095) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_5184 sensor histidine kinase; histidine kinase 7940095 8362482 Cpin_6300 Chitinophaga pinensis DSM 2588 histidine kinase YP_003125906.1 7936328 R 485918 CDS YP_003125907.1 256425254 8362483 complement(7940101..7940868) 1 NC_013132.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 7940868 mazG 8362483 mazG Chitinophaga pinensis DSM 2588 nucleoside triphosphate pyrophosphohydrolase YP_003125907.1 7940101 R 485918 CDS YP_003125908.1 256425255 8362484 7941005..7943287 1 NC_013132.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Resolvase RNase H domain protein fold; KEGG: sfu:Sfum_1838 RNA binding S1 domain protein; RNA binding S1 domain-containing protein 7943287 8362484 Cpin_6302 Chitinophaga pinensis DSM 2588 RNA binding S1 domain-containing protein YP_003125908.1 7941005 D 485918 CDS YP_003125909.1 256425256 8362485 complement(7943373..7943903) 1 NC_013132.1 KEGG: aav:Aave_1451 hypothetical protein; hypothetical protein 7943903 8362485 Cpin_6303 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125909.1 7943373 R 485918 CDS YP_003125910.1 256425257 8362486 complement(7943978..7944757) 1 NC_013132.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bch:Bcen2424_0544 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 7944757 8362486 Cpin_6304 Chitinophaga pinensis DSM 2588 enoyl-CoA hydratase/isomerase YP_003125910.1 7943978 R 485918 CDS YP_003125911.1 256425258 8362487 complement(7944766..7945761) 1 NC_013132.1 KEGG: rce:RC1_2066 hypothetical protein; hypothetical protein 7945761 8362487 Cpin_6305 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125911.1 7944766 R 485918 CDS YP_003125912.1 256425259 8362488 7945907..7946740 1 NC_013132.1 KEGG: bsu:BSU39230 cell wall-associated protein precursor (CWBP200, 105, 62); hypothetical protein 7946740 8362488 Cpin_6306 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125912.1 7945907 D 485918 CDS YP_003125913.1 256425260 8362489 complement(7946776..7947516) 1 NC_013132.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; KEGG: sml:Smlt2533 DNA-formamidopyrimidine glycosylase; DNA glycosylase/AP lyase 7947516 8362489 Cpin_6307 Chitinophaga pinensis DSM 2588 DNA glycosylase/AP lyase YP_003125913.1 7946776 R 485918 CDS YP_003125914.1 256425261 8362490 complement(7947566..7948390) 1 NC_013132.1 KEGG: Mgam; maltase-glucoamylase; hypothetical protein 7948390 8362490 Cpin_6308 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125914.1 7947566 R 485918 CDS YP_003125915.1 256425262 8362491 complement(7948731..7949114) 1 NC_013132.1 KEGG: ade:Adeh_2155 hypothetical protein; hypothetical protein 7949114 8362491 Cpin_6309 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125915.1 7948731 R 485918 CDS YP_003125916.1 256425263 8362492 complement(7949092..7949889) 1 NC_013132.1 KEGG: mxa:MXAN_0652 hypothetical protein; hypothetical protein 7949889 8362492 Cpin_6310 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125916.1 7949092 R 485918 CDS YP_003125917.1 256425264 8362493 complement(7949964..7952495) 1 NC_013132.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: aba:Acid345_4773 excinuclease ABC, A subunit; excinuclease ABC subunit A 7952495 8362493 Cpin_6311 Chitinophaga pinensis DSM 2588 excinuclease ABC subunit A YP_003125917.1 7949964 R 485918 CDS YP_003125918.1 256425265 8362494 complement(7952539..7953681) 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: TPR Domain containing protein; hypothetical protein 7953681 8362494 Cpin_6312 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125918.1 7952539 R 485918 CDS YP_003125919.1 256425266 8362495 complement(7954039..7954551) 1 NC_013132.1 KEGG: sde:Sde_2993 endoglucanase-like; hypothetical protein 7954551 8362495 Cpin_6313 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125919.1 7954039 R 485918 CDS YP_003125920.1 256425267 8362496 7954694..7955119 1 NC_013132.1 hypothetical protein 7955119 8362496 Cpin_6314 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125920.1 7954694 D 485918 CDS YP_003125921.1 256425268 8362497 7955229..7956167 1 NC_013132.1 PFAM: NmrA family protein; KEGG: ank:AnaeK_1072 NmrA family protein; NmrA family protein 7956167 8362497 Cpin_6315 Chitinophaga pinensis DSM 2588 NmrA family protein YP_003125921.1 7955229 D 485918 CDS YP_003125922.1 256425269 8362498 complement(7956385..7957320) 1 NC_013132.1 hypothetical protein 7957320 8362498 Cpin_6316 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125922.1 7956385 R 485918 CDS YP_003125923.1 256425270 8362499 complement(7957351..7957515) 1 NC_013132.1 hypothetical protein 7957515 8362499 Cpin_6317 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125923.1 7957351 R 485918 CDS YP_003125924.1 256425271 8362500 7957684..7958166 1 NC_013132.1 hypothetical protein 7958166 8362500 Cpin_6318 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125924.1 7957684 D 485918 CDS YP_003125925.1 256425272 8362501 7958342..7958791 1 NC_013132.1 PFAM: heat shock protein Hsp20; KEGG: rfe:RF_1004 small heat shock protein; heat shock protein Hsp20 7958791 8362501 Cpin_6319 Chitinophaga pinensis DSM 2588 heat shock protein Hsp20 YP_003125925.1 7958342 D 485918 CDS YP_003125926.1 256425273 8362504 complement(7959138..7960799) 1 NC_013132.1 PFAM: resolvase domain protein; Recombinase; KEGG: sat:SYN_00509 site-specific recombinase; resolvase domain-containing protein 7960799 8362504 Cpin_6320 Chitinophaga pinensis DSM 2588 resolvase domain-containing protein YP_003125926.1 7959138 R 485918 CDS YP_003125927.1 256425274 8362505 complement(7960971..7961306) 1 NC_013132.1 hypothetical protein 7961306 8362505 Cpin_6321 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125927.1 7960971 R 485918 CDS YP_003125928.1 256425275 8362506 complement(7961629..7961961) 1 NC_013132.1 hypothetical protein 7961961 8362506 Cpin_6322 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125928.1 7961629 R 485918 CDS YP_003125929.1 256425276 8362507 complement(7961976..7962311) 1 NC_013132.1 hypothetical protein 7962311 8362507 Cpin_6323 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125929.1 7961976 R 485918 CDS YP_003125930.1 256425277 8362508 complement(7962332..7963168) 1 NC_013132.1 KEGG: mes:Meso_3789 relaxase/mobilization nuclease domain; hypothetical protein 7963168 8362508 Cpin_6324 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125930.1 7962332 R 485918 CDS YP_003125931.1 256425278 8362509 complement(7963140..7963544) 1 NC_013132.1 PFAM: mobilisation protein; KEGG: mob protein; mobilisation protein 7963544 8362509 Cpin_6325 Chitinophaga pinensis DSM 2588 mobilisation protein YP_003125931.1 7963140 R 485918 CDS YP_003125932.1 256425279 8362510 complement(7963702..7965468) 1 NC_013132.1 PFAM: TRAG family protein; KEGG: atc:AGR_L_58 component of type IV secretion system; TRAG family protein 7965468 8362510 Cpin_6326 Chitinophaga pinensis DSM 2588 TRAG family protein YP_003125932.1 7963702 R 485918 CDS YP_003125933.1 256425280 8362511 complement(7965657..7965818) 1 NC_013132.1 hypothetical protein 7965818 8362511 Cpin_6327 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125933.1 7965657 R 485918 CDS YP_003125934.1 256425281 8362512 complement(7966026..7967237) 1 NC_013132.1 hypothetical protein 7967237 8362512 Cpin_6328 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125934.1 7966026 R 485918 CDS YP_003125935.1 256425282 8362513 complement(7967255..7967743) 1 NC_013132.1 hypothetical protein 7967743 8362513 Cpin_6329 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125935.1 7967255 R 485918 CDS YP_003125936.1 256425283 8362514 complement(7967766..7967858) 1 NC_013132.1 hypothetical protein 7967858 8362514 Cpin_6330 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125936.1 7967766 R 485918 CDS YP_003125937.1 256425284 8362515 7968004..7968240 1 NC_013132.1 KEGG: bph:Bphy_1926 hypothetical protein; hypothetical protein 7968240 8362515 Cpin_6331 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125937.1 7968004 D 485918 CDS YP_003125938.1 256425285 8362516 7968218..7969489 1 NC_013132.1 PFAM: integrase family protein; KEGG: bph:Bphy_1927 integrase family protein; integrase family protein 7969489 8362516 Cpin_6332 Chitinophaga pinensis DSM 2588 integrase family protein YP_003125938.1 7968218 D 485918 CDS YP_003125939.1 256425286 8362517 7969595..7972207 1 NC_013132.1 TIGRFAM: conjugative relaxase domain protein; PFAM: TrwC relaxase; KEGG: sal:Sala_2489 TrwC protein; conjugative relaxase 7972207 8362517 Cpin_6333 Chitinophaga pinensis DSM 2588 conjugative relaxase YP_003125939.1 7969595 D 485918 CDS YP_003125940.1 256425287 8362518 complement(7972264..7972839) 1 NC_013132.1 KEGG: sml:Smlt2076 hypothetical protein; hypothetical protein 7972839 8362518 Cpin_6334 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125940.1 7972264 R 485918 CDS YP_003125941.1 256425288 8362519 complement(7972900..7973259) 1 NC_013132.1 KEGG: xca:xccb100_4358 hypothetical protein; hypothetical protein 7973259 8362519 Cpin_6335 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125941.1 7972900 R 485918 CDS YP_003125942.1 256425289 8362520 complement(7973345..7974238) 1 NC_013132.1 PFAM: domain of unknown function DUF1738; KEGG: nha:Nham_0574 antirestriction protein; hypothetical protein 7974238 8362520 Cpin_6336 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125942.1 7973345 R 485918 CDS YP_003125943.1 256425290 8362521 complement(7974461..7975372) 1 NC_013132.1 KEGG: dps:DPPA08 related to DNA primase PrmN1 (partial length); hypothetical protein 7975372 8362521 Cpin_6337 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125943.1 7974461 R 485918 CDS YP_003125944.1 256425291 8362522 complement(7975451..7975645) 1 NC_013132.1 hypothetical protein 7975645 8362522 Cpin_6338 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125944.1 7975451 R 485918 CDS YP_003125945.1 256425292 8362523 complement(7975937..7976083) 1 NC_013132.1 hypothetical protein 7976083 8362523 Cpin_6339 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125945.1 7975937 R 485918 CDS YP_003125946.1 256425293 8362524 complement(7976249..7976746) 1 NC_013132.1 hypothetical protein 7976746 8362524 Cpin_6340 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125946.1 7976249 R 485918 CDS YP_003125947.1 256425294 8362525 complement(7976761..7977291) 1 NC_013132.1 hypothetical protein 7977291 8362525 Cpin_6341 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125947.1 7976761 R 485918 CDS YP_003125948.1 256425295 8362526 complement(7977288..7978088) 1 NC_013132.1 hypothetical protein 7978088 8362526 Cpin_6342 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125948.1 7977288 R 485918 CDS YP_003125949.1 256425296 8362527 complement(7978133..7978768) 1 NC_013132.1 PFAM: resolvase domain protein; KEGG: dar:Daro_0802 resolvase, N-terminal; resolvase domain-containing protein 7978768 8362527 Cpin_6343 Chitinophaga pinensis DSM 2588 resolvase domain-containing protein YP_003125949.1 7978133 R 485918 CDS YP_003125950.1 256425297 8362528 complement(7979238..7980851) 1 NC_013132.1 SMART: AAA ATPase; KEGG: nme:NMB2008 ABC transporter, ATP-binding protein-related protein; ATPase AAA 7980851 8362528 Cpin_6344 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003125950.1 7979238 R 485918 CDS YP_003125951.1 256425298 8362529 complement(join(7981185..7982036,7982035..7982295)) 1 NC_013132.1 PFAM: transposase IS3/IS911 family protein; KEGG: lpp:lpp0199 hypothetical protein; transposase IS3/IS911 family protein 7982295 8362529 Cpin_6345 Chitinophaga pinensis DSM 2588 transposase IS3/IS911 family protein YP_003125951.1 7981185 R 485918 CDS YP_003125952.1 256425299 8362530 complement(7982362..7982622) 1 NC_013132.1 hypothetical protein 7982622 8362530 Cpin_6346 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125952.1 7982362 R 485918 CDS YP_003125953.1 256425300 8362532 complement(7984084..7984917) 1 NC_013132.1 PFAM: lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein 7984917 8362532 Cpin_6348 Chitinophaga pinensis DSM 2588 G-D-S-L family lipolytic protein YP_003125953.1 7984084 R 485918 CDS YP_003125954.1 256425301 8362533 7985272..7985811 1 NC_013132.1 hypothetical protein 7985811 8362533 Cpin_6349 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125954.1 7985272 D 485918 CDS YP_003125955.1 256425302 8362534 complement(7985911..7986390) 1 NC_013132.1 hypothetical protein 7986390 8362534 Cpin_6350 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125955.1 7985911 R 485918 CDS YP_003125956.1 256425303 8362535 complement(7986406..7987170) 1 NC_013132.1 hypothetical protein 7987170 8362535 Cpin_6351 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125956.1 7986406 R 485918 CDS YP_003125957.1 256425304 8362536 complement(7987183..7987650) 1 NC_013132.1 KEGG: pha:PSHAa1376 hypothetical protein; hypothetical protein 7987650 8362536 Cpin_6352 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125957.1 7987183 R 485918 CDS YP_003125958.1 256425305 8362537 complement(7987681..7988412) 1 NC_013132.1 hypothetical protein 7988412 8362537 Cpin_6353 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125958.1 7987681 R 485918 CDS YP_003125959.1 256425306 8362538 7988593..7990482 1 NC_013132.1 hypothetical protein 7990482 8362538 Cpin_6354 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125959.1 7988593 D 485918 CDS YP_003125960.1 256425307 8362539 complement(7990613..7991665) 1 NC_013132.1 hypothetical protein 7991665 8362539 Cpin_6355 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125960.1 7990613 R 485918 CDS YP_003125961.1 256425308 8362540 complement(7991753..7992154) 1 NC_013132.1 KEGG: kpe:KPK_2956 hypothetical protein; phage envelope protein 7992154 8362540 Cpin_6356 Chitinophaga pinensis DSM 2588 phage envelope protein YP_003125961.1 7991753 R 485918 CDS YP_003125962.1 256425309 8362541 complement(7992211..7993302) 1 NC_013132.1 PFAM: protein of unknown function UPF0118; KEGG: mlo:mlr4869 hypothetical protein; hypothetical protein 7993302 8362541 Cpin_6357 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125962.1 7992211 R 485918 CDS YP_003125963.1 256425310 8362542 7993454..7994362 1 NC_013132.1 KEGG: smd:Smed_5397 hypothetical protein; hypothetical protein 7994362 8362542 Cpin_6358 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125963.1 7993454 D 485918 CDS YP_003125964.1 256425311 8362543 7994729..7996156 1 NC_013132.1 PFAM: peptidase S41; KEGG: ban:BA2234 hypothetical protein; peptidase S41 7996156 8362543 Cpin_6359 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003125964.1 7994729 D 485918 CDS YP_003125965.1 256425312 8362544 7996275..7997222 1 NC_013132.1 KEGG: gur:Gura_2274 virion core protein (lumpy skin disease virus)-like protein; virion core protein (lumpy skin disease virus)-like protein 7997222 8362544 Cpin_6360 Chitinophaga pinensis DSM 2588 virion core protein (lumpy skin disease virus)-like protein YP_003125965.1 7996275 D 485918 CDS YP_003125966.1 256425313 8362545 7997227..7997475 1 NC_013132.1 hypothetical protein 7997475 8362545 Cpin_6361 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125966.1 7997227 D 485918 CDS YP_003125967.1 256425314 8362546 7997478..7998452 1 NC_013132.1 KEGG: hch:HCH_01892 electron transport complex protein RnfC; hypothetical protein 7998452 8362546 Cpin_6362 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125967.1 7997478 D 485918 CDS YP_003125968.1 256425315 8362547 7998477..7999049 1 NC_013132.1 hypothetical protein 7999049 8362547 Cpin_6363 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125968.1 7998477 D 485918 CDS YP_003125969.1 256425316 8362548 complement(7999112..7999981) 1 NC_013132.1 hypothetical protein 7999981 8362548 Cpin_6364 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125969.1 7999112 R 485918 CDS YP_003125970.1 256425317 8362549 complement(8000019..8001758) 1 NC_013132.1 KEGG: mlo:mll3591 alpha-L-arabinofuranosidase; alpha-L-arabinofuranosidase 8001758 8362549 Cpin_6365 Chitinophaga pinensis DSM 2588 alpha-L-arabinofuranosidase YP_003125970.1 8000019 R 485918 CDS YP_003125971.1 256425318 8362550 complement(8001834..8003093) 1 NC_013132.1 KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein; hypothetical protein 8003093 8362550 Cpin_6366 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125971.1 8001834 R 485918 CDS YP_003125972.1 256425319 8362551 complement(8003110..8004753) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8004753 8362551 Cpin_6367 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003125972.1 8003110 R 485918 CDS YP_003125973.1 256425320 8362552 complement(8004774..8007971) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 8007971 8362552 Cpin_6368 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003125973.1 8004774 R 485918 CDS YP_003125974.1 256425321 8362553 complement(8008170..8012270) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; two component regulator three Y domain protein; two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; helix-turn- helix- domain containing protein AraC type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: sde:Sde_0667 response regulator receiver domain-containing protein; histidine kinase 8012270 8362553 Cpin_6369 Chitinophaga pinensis DSM 2588 histidine kinase YP_003125974.1 8008170 R 485918 CDS YP_003125975.1 256425322 8362554 8012710..8013555 1 NC_013132.1 hypothetical protein 8013555 8362554 Cpin_6370 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125975.1 8012710 D 485918 CDS YP_003125976.1 256425323 8362555 8013580..8014122 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: acr:Acry_1333 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 8014122 8362555 Cpin_6371 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003125976.1 8013580 D 485918 CDS YP_003125977.1 256425324 8362556 8014119..8014700 1 NC_013132.1 KEGG: similar to mucin; hypothetical protein 8014700 8362556 Cpin_6372 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125977.1 8014119 D 485918 CDS YP_003125978.1 256425325 8362557 complement(8014871..8015782) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: cps:CPS_0828 alpha/beta fold family hydrolase; alpha/beta hydrolase 8015782 8362557 Cpin_6373 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003125978.1 8014871 R 485918 CDS YP_003125979.1 256425326 8362558 complement(8015858..8016442) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator, TetR family; TetR family transcriptional regulator 8016442 8362558 Cpin_6374 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003125979.1 8015858 R 485918 CDS YP_003125980.1 256425327 8362559 complement(8016828..8017889) 1 NC_013132.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: hypothetical protein; 2-nitropropane dioxygenase 8017889 8362559 Cpin_6375 Chitinophaga pinensis DSM 2588 2-nitropropane dioxygenase YP_003125980.1 8016828 R 485918 CDS YP_003125981.1 256425328 8362560 complement(8017938..8018180) 1 NC_013132.1 KEGG: ade:Adeh_3207 hypothetical protein; hypothetical protein 8018180 8362560 Cpin_6376 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125981.1 8017938 R 485918 CDS YP_003125982.1 256425329 8362561 complement(8018191..8018757) 1 NC_013132.1 KEGG: abb:ABBFA_000249 regulatory protein; regulatory protein 8018757 8362561 Cpin_6377 Chitinophaga pinensis DSM 2588 regulatory protein YP_003125982.1 8018191 R 485918 CDS YP_003125983.1 256425330 8362562 complement(8018821..8019663) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: short-chain dehydrogenase/reductase (SDR) family protein; short-chain dehydrogenase/reductase SDR 8019663 8362562 Cpin_6378 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003125983.1 8018821 R 485918 CDS YP_003125984.1 256425331 8362563 complement(8019766..8020659) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 8020659 8362563 Cpin_6379 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003125984.1 8019766 R 485918 CDS YP_003125985.1 256425332 8362564 8020894..8021607 1 NC_013132.1 KEGG: net:Neut_1347 prolyl 4-hydroxylase, alpha subunit; prolyl 4-hydroxylase subunit alpha 8021607 8362564 Cpin_6380 Chitinophaga pinensis DSM 2588 prolyl 4-hydroxylase subunit alpha YP_003125985.1 8020894 D 485918 CDS YP_003125986.1 256425333 8362565 complement(8021704..8022699) 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mms:mma_1920 quinone oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 8022699 8362565 Cpin_6381 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003125986.1 8021704 R 485918 CDS YP_003125987.1 256425334 8362566 8022795..8024213 1 NC_013132.1 PFAM: beta-lactamase; KEGG: mrd:Mrad2831_2416 beta-lactamase; beta-lactamase 8024213 8362566 Cpin_6382 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003125987.1 8022795 D 485918 CDS YP_003125988.1 256425335 8362567 complement(8024220..8024468) 1 NC_013132.1 hypothetical protein 8024468 8362567 Cpin_6383 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125988.1 8024220 R 485918 CDS YP_003125989.1 256425336 8362568 8024592..8025836 1 NC_013132.1 PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein; KWG repeat-containing protein 8025836 8362568 Cpin_6384 Chitinophaga pinensis DSM 2588 KWG repeat-containing protein YP_003125989.1 8024592 D 485918 CDS YP_003125990.1 256425337 8362569 complement(8025888..8026508) 1 NC_013132.1 hypothetical protein 8026508 8362569 Cpin_6385 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125990.1 8025888 R 485918 CDS YP_003125991.1 256425338 8362570 8026565..8027749 1 NC_013132.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: nha:Nham_4372 acetate kinase; acetate kinase 8027749 8362570 Cpin_6386 Chitinophaga pinensis DSM 2588 acetate kinase YP_003125991.1 8026565 D 485918 CDS YP_003125992.1 256425339 8362571 8027760..8030123 1 NC_013132.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bja:bll2518 phosphoketolase; phosphoketolase 8030123 8362571 Cpin_6387 Chitinophaga pinensis DSM 2588 phosphoketolase YP_003125992.1 8027760 D 485918 CDS YP_003125993.1 256425340 8362572 complement(8030468..8030917) 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pca:Pcar_2913 MarR family transcriptional regulator; MarR family transcriptional regulator 8030917 8362572 Cpin_6388 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003125993.1 8030468 R 485918 CDS YP_003125994.1 256425341 8362573 complement(8030966..8031961) 1 NC_013132.1 hypothetical protein 8031961 8362573 Cpin_6389 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125994.1 8030966 R 485918 CDS YP_003125995.1 256425342 8362574 complement(8031966..8036417) 1 NC_013132.1 TIGRFAM: conserved repeat domain protein; KEGG: aby:ABAYE0792 hypothetical protein; hypothetical protein 8036417 8362574 Cpin_6390 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125995.1 8031966 R 485918 CDS YP_003125996.1 256425343 8362575 8036716..8037153 1 NC_013132.1 KEGG: bid:Bind_0038 signal peptide protein; signal peptide protein 8037153 8362575 Cpin_6391 Chitinophaga pinensis DSM 2588 signal peptide protein YP_003125996.1 8036716 D 485918 CDS YP_003125997.1 256425344 8362576 complement(8037274..8038164) 1 NC_013132.1 hypothetical protein 8038164 8362576 Cpin_6392 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125997.1 8037274 R 485918 CDS YP_003125998.1 256425345 8362577 complement(8038172..8038714) 1 NC_013132.1 PFAM: YceI family protein; KEGG: mxa:MXAN_7382 hypothetical protein; hypothetical protein 8038714 8362577 Cpin_6393 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125998.1 8038172 R 485918 CDS YP_003125999.1 256425346 8362578 complement(8038726..8039133) 1 NC_013132.1 KEGG: sus:Acid_3744 hypothetical protein; hypothetical protein 8039133 8362578 Cpin_6394 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003125999.1 8038726 R 485918 CDS YP_003126000.1 256425347 8362579 complement(8039145..8039567) 1 NC_013132.1 hypothetical protein 8039567 8362579 Cpin_6395 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126000.1 8039145 R 485918 CDS YP_003126001.1 256425348 8362580 complement(8039593..8041536) 1 NC_013132.1 KEGG: net:Neut_1085 hypothetical protein; hypothetical protein 8041536 8362580 Cpin_6396 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126001.1 8039593 R 485918 CDS YP_003126002.1 256425349 8362581 complement(8041524..8042099) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: aba:Acid345_2693 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 8042099 8362581 Cpin_6397 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126002.1 8041524 R 485918 CDS YP_003126003.1 256425350 8362582 complement(8042474..8043712) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: FecR protein; Sigma-70 region 4 type 2; KEGG: FecR iron sensor protein; anti-FecI sigma factor FecR 8043712 8362582 Cpin_6398 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126003.1 8042474 R 485918 CDS YP_003126004.1 256425351 8362583 8043720..8044028 1 NC_013132.1 KEGG: GI12165 gene product from transcript GI12165- RA; hypothetical protein 8044028 8362583 Cpin_6399 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126004.1 8043720 D 485918 CDS YP_003126005.1 256425352 8362584 complement(8043988..8044311) 1 NC_013132.1 hypothetical protein 8044311 8362584 Cpin_6400 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126005.1 8043988 R 485918 CDS YP_003126006.1 256425353 8362585 complement(8044461..8044817) 1 NC_013132.1 hypothetical protein 8044817 8362585 Cpin_6401 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126006.1 8044461 R 485918 CDS YP_003126007.1 256425354 8362586 8044898..8045731 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: abo:ABO_1265 oxidoreductase; short-chain dehydrogenase/reductase SDR 8045731 8362586 Cpin_6402 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126007.1 8044898 D 485918 CDS YP_003126008.1 256425355 8362587 complement(8045861..8046472) 1 NC_013132.1 PFAM: CheB methylesterase; KEGG: ppd:Ppro_3165 signal transduction histidine kinase with CheB and CheR activity; CheB methylesterase 8046472 8362587 Cpin_6403 Chitinophaga pinensis DSM 2588 CheB methylesterase YP_003126008.1 8045861 R 485918 CDS YP_003126009.1 256425356 8362588 8046645..8048585 1 NC_013132.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; mRNA capping enzyme; DNA primase small subunit; KEGG: gbm:Gbem_0128 DNA ligase D; DNA ligase D 8048585 8362588 Cpin_6404 Chitinophaga pinensis DSM 2588 DNA ligase D YP_003126009.1 8046645 D 485918 CDS YP_003126010.1 256425357 8362589 8048625..8049062 1 NC_013132.1 KEGG: bpy:Bphyt_3433 histone H1-like protein; histone H1-like protein 8049062 8362589 Cpin_6405 Chitinophaga pinensis DSM 2588 histone H1-like protein YP_003126010.1 8048625 D 485918 CDS YP_003126011.1 256425358 8362590 complement(8049065..8049823) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region; LytTR family two component transcriptional regulator 8049823 8362590 Cpin_6406 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003126011.1 8049065 R 485918 CDS YP_003126012.1 256425359 8362591 complement(8049798..8050865) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 8050865 8362591 Cpin_6407 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003126012.1 8049798 R 485918 CDS YP_003126013.1 256425360 8362592 8051011..8053329 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor 8053329 8362592 Cpin_6408 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126013.1 8051011 D 485918 CDS YP_003126014.1 256425361 8362593 8053335..8054147 1 NC_013132.1 hypothetical protein 8054147 8362593 Cpin_6409 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126014.1 8053335 D 485918 CDS YP_003126015.1 256425362 8362594 8054252..8055091 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll2336 transcriptional regulatory protein; AraC family transcriptional regulator 8055091 8362594 Cpin_6410 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126015.1 8054252 D 485918 CDS YP_003126016.1 256425363 8362595 8055162..8055986 1 NC_013132.1 PFAM: inositol monophosphatase; KEGG: rde:RD1_2507 inositol-1-monophosphatase; inositol monophosphatase 8055986 8362595 Cpin_6411 Chitinophaga pinensis DSM 2588 inositol monophosphatase YP_003126016.1 8055162 D 485918 CDS YP_003126017.1 256425364 8362596 complement(8056085..8056270) 1 NC_013132.1 hypothetical protein 8056270 8362596 Cpin_6412 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126017.1 8056085 R 485918 CDS YP_003126018.1 256425365 8362597 8056449..8056841 1 NC_013132.1 hypothetical protein 8056841 8362597 Cpin_6413 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126018.1 8056449 D 485918 CDS YP_003126019.1 256425366 8362598 8056909..8057406 1 NC_013132.1 KEGG: pmy:Pmen_2325 hypothetical protein; hypothetical protein 8057406 8362598 Cpin_6414 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126019.1 8056909 D 485918 CDS YP_003126020.1 256425367 8362599 8057413..8058222 1 NC_013132.1 hypothetical protein 8058222 8362599 Cpin_6415 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126020.1 8057413 D 485918 CDS YP_003126021.1 256425368 8362600 8058293..8060146 1 NC_013132.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: mxa:MXAN_5573 rhs element Vgr family protein; Rhs element Vgr protein 8060146 8362600 Cpin_6416 Chitinophaga pinensis DSM 2588 Rhs element Vgr protein YP_003126021.1 8058293 D 485918 CDS YP_003126022.1 256425369 8362601 8060156..8061526 1 NC_013132.1 KEGG: hch:HCH_03531 hypothetical protein; hypothetical protein 8061526 8362601 Cpin_6417 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126022.1 8060156 D 485918 CDS YP_003126023.1 256425370 8362602 8061547..8065653 1 NC_013132.1 PFAM: hypothetical protein; KEGG: hch:HCH_03533 rhs family protein; hypothetical protein 8065653 8362602 Cpin_6418 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126023.1 8061547 D 485918 CDS YP_003126024.1 256425371 8362603 8065664..8066590 1 NC_013132.1 hypothetical protein 8066590 8362603 Cpin_6419 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126024.1 8065664 D 485918 CDS YP_003126025.1 256425372 8362604 complement(8066750..8067610) 1 NC_013132.1 KEGG: bba:Bd3309 hypothetical protein; hypothetical protein 8067610 8362604 Cpin_6420 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126025.1 8066750 R 485918 CDS YP_003126026.1 256425373 8362605 8067959..8068597 1 NC_013132.1 hypothetical protein 8068597 8362605 Cpin_6421 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126026.1 8067959 D 485918 CDS YP_003126027.1 256425374 8362606 8068702..8068971 1 NC_013132.1 hypothetical protein 8068971 8362606 Cpin_6422 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126027.1 8068702 D 485918 CDS YP_003126028.1 256425375 8362607 complement(8068943..8070193) 1 NC_013132.1 KEGG: ccs:CCNA_01600 hypothetical protein; hypothetical protein 8070193 8362607 Cpin_6423 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126028.1 8068943 R 485918 CDS YP_003126029.1 256425376 8362608 complement(8070223..8071233) 1 NC_013132.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: aba:Acid345_4056 L-alanine-DL-glutamate epimerase fmaily protein; mandelate racemase/muconate lactonizing protein 8071233 8362608 Cpin_6424 Chitinophaga pinensis DSM 2588 mandelate racemase/muconate lactonizing protein YP_003126029.1 8070223 R 485918 CDS YP_003126030.1 256425377 8362609 8071341..8071946 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: saz:Sama_2611 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 8071946 8362609 Cpin_6425 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126030.1 8071341 D 485918 CDS YP_003126031.1 256425378 8362610 8072003..8073196 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 8073196 8362610 Cpin_6426 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126031.1 8072003 D 485918 CDS YP_003126032.1 256425379 8362611 8073521..8076826 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8076826 8362611 Cpin_6427 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126032.1 8073521 D 485918 CDS YP_003126033.1 256425380 8362612 8076837..8078237 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8078237 8362612 Cpin_6428 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126033.1 8076837 D 485918 CDS YP_003126034.1 256425381 8362613 8078263..8080410 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; thioredoxin domain protein; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 8080410 8362613 Cpin_6429 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003126034.1 8078263 D 485918 CDS YP_003126035.1 256425382 8362614 complement(8080567..8082471) 1 NC_013132.1 TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: gme:Gmet_3532 chaperone DnaK; chaperone protein DnaK 8082471 8362614 Cpin_6430 Chitinophaga pinensis DSM 2588 chaperone protein DnaK YP_003126035.1 8080567 R 485918 CDS YP_003126036.1 256425383 8362615 8082724..8084073 1 NC_013132.1 PFAM: OmpA/MotB domain protein; KEGG: abo:ABO_1527 OmpA family protein; OmpA/MotB domain-containing protein 8084073 8362615 Cpin_6431 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003126036.1 8082724 D 485918 CDS YP_003126037.1 256425384 8362616 8084126..8084725 1 NC_013132.1 hypothetical protein 8084725 8362616 Cpin_6432 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126037.1 8084126 D 485918 CDS YP_003126038.1 256425385 8362617 8084851..8086779 1 NC_013132.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 8086779 argS 8362617 argS Chitinophaga pinensis DSM 2588 arginyl-tRNA synthetase YP_003126038.1 8084851 D 485918 CDS YP_003126039.1 256425386 8362618 complement(8086849..8087541) 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: bcr:BCAH187_A4528 TPR domain protein; hypothetical protein 8087541 8362618 Cpin_6434 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126039.1 8086849 R 485918 CDS YP_003126040.1 256425387 8362619 complement(8087577..8088062) 1 NC_013132.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: Cda; cytidine deaminase; zinc-binding CMP/dCMP deaminase 8088062 8362619 Cpin_6435 Chitinophaga pinensis DSM 2588 zinc-binding CMP/dCMP deaminase YP_003126040.1 8087577 R 485918 CDS YP_003126041.1 256425388 8362620 complement(8088282..8089463) 1 NC_013132.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: pcr:Pcryo_0365 peptidase S26A, signal peptidase I; signal peptidase I 8089463 8362620 Cpin_6436 Chitinophaga pinensis DSM 2588 signal peptidase I YP_003126041.1 8088282 R 485918 CDS YP_003126042.1 256425389 8362621 complement(8089677..8090333) 1 NC_013132.1 KEGG: bcb:BCB4264_A4227 BioH protein; hypothetical protein 8090333 8362621 Cpin_6437 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126042.1 8089677 R 485918 CDS YP_003126043.1 256425390 8362622 complement(8090399..8091583) 1 NC_013132.1 PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: two component, sigma54 specific, transcriptional regulator, Fis family; Fis family transcriptional regulator 8091583 8362622 Cpin_6438 Chitinophaga pinensis DSM 2588 Fis family transcriptional regulator YP_003126043.1 8090399 R 485918 CDS YP_003126044.1 256425391 8362623 8091751..8092566 1 NC_013132.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mxa:MXAN_1572 serine O- acetyltransferase; serine O-acetyltransferase 8092566 8362623 Cpin_6439 Chitinophaga pinensis DSM 2588 serine O-acetyltransferase YP_003126044.1 8091751 D 485918 CDS YP_003126045.1 256425392 8362624 8092567..8093451 1 NC_013132.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 8093451 cysM 8362624 cysM Chitinophaga pinensis DSM 2588 cysteine synthase B YP_003126045.1 8092567 D 485918 CDS YP_003126046.1 256425393 8362625 complement(8093710..8094693) 1 NC_013132.1 PFAM: transketolase central region; transketolase domain protein; KEGG: rru:Rru_A1880 pyruvate dehydrogenase subunit beta; transketolase 8094693 8362625 Cpin_6441 Chitinophaga pinensis DSM 2588 transketolase YP_003126046.1 8093710 R 485918 CDS YP_003126047.1 256425394 8362626 8094880..8095518 1 NC_013132.1 hypothetical protein 8095518 8362626 Cpin_6442 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126047.1 8094880 D 485918 CDS YP_003126048.1 256425395 8362627 complement(8095738..8096916) 1 NC_013132.1 KEGG: hypothetical protein; K00626 acetyl-CoA C- acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 8096916 8362627 Cpin_6443 Chitinophaga pinensis DSM 2588 acetyl-CoA acetyltransferase YP_003126048.1 8095738 R 485918 CDS YP_003126049.1 256425396 8362628 complement(8096990..8097646) 1 NC_013132.1 hypothetical protein 8097646 8362628 Cpin_6444 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126049.1 8096990 R 485918 CDS YP_003126050.1 256425397 8362629 complement(8097677..8098471) 1 NC_013132.1 hypothetical protein 8098471 8362629 Cpin_6445 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126050.1 8097677 R 485918 CDS YP_003126051.1 256425398 8362630 complement(8098471..8099682) 1 NC_013132.1 KEGG: bba:Bd2562 hypothetical protein; hypothetical protein 8099682 8362630 Cpin_6446 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126051.1 8098471 R 485918 CDS YP_003126052.1 256425399 8362631 complement(8099844..8101427) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8101427 8362631 Cpin_6447 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126052.1 8099844 R 485918 CDS YP_003126053.1 256425400 8362632 complement(8101439..8104831) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 8104831 8362632 Cpin_6448 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126053.1 8101439 R 485918 CDS YP_003126054.1 256425401 8362633 complement(8104919..8105905) 1 NC_013132.1 PFAM: FecR protein; KEGG: pau:PA14_46650 transmembrane sensor; anti-FecI sigma factor FecR 8105905 8362633 Cpin_6449 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126054.1 8104919 R 485918 CDS YP_003126055.1 256425402 8362634 complement(8106004..8106684) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: sus:Acid_7860 ECF subfamily RNA polymerase sigma-24 factor; LuxR family transcriptional regulator 8106684 8362634 Cpin_6450 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003126055.1 8106004 R 485918 CDS YP_003126056.1 256425403 8362635 8107020..8109008 1 NC_013132.1 KEGG: bha:BH1375 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; DNA primase catalytic core domain; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; DNA primase 8109008 8362635 Cpin_6451 Chitinophaga pinensis DSM 2588 DNA primase YP_003126056.1 8107020 D 485918 CDS YP_003126057.1 256425404 8362636 complement(8109105..8109599) 1 NC_013132.1 PFAM: dihydrofolate reductase region; KEGG: pst:PSPTO_0437 dihydrofolate reductase; dihydrofolate reductase 8109599 8362636 Cpin_6452 Chitinophaga pinensis DSM 2588 dihydrofolate reductase YP_003126057.1 8109105 R 485918 CDS YP_003126058.1 256425405 8362637 complement(8109643..8110437) 1 NC_013132.1 KEGG: dar:Daro_0593 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 8110437 8362637 Cpin_6453 Chitinophaga pinensis DSM 2588 thymidylate synthase YP_003126058.1 8109643 R 485918 CDS YP_003126059.1 256425406 8362638 complement(8110469..8110909) 1 NC_013132.1 hypothetical protein 8110909 8362638 Cpin_6454 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126059.1 8110469 R 485918 CDS YP_003126060.1 256425407 8362639 complement(8111057..8112235) 1 NC_013132.1 PFAM: proline dehydrogenase; KEGG: hypothetical protein; proline dehydrogenase 8112235 8362639 Cpin_6455 Chitinophaga pinensis DSM 2588 proline dehydrogenase YP_003126060.1 8111057 R 485918 CDS YP_003126061.1 256425408 8362640 8112443..8113228 1 NC_013132.1 PFAM: FecR protein; KEGG: nwi:Nwi_3080 FecR protein; anti-FecI sigma factor FecR 8113228 8362640 Cpin_6456 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126061.1 8112443 D 485918 CDS YP_003126062.1 256425409 8362641 complement(8113373..8113618) 1 NC_013132.1 hypothetical protein 8113618 8362641 Cpin_6457 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126062.1 8113373 R 485918 CDS YP_003126063.1 256425410 8362642 complement(8114271..8115479) 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; KEGG: sml:Smlt4354 oxidoreductase; FAD dependent oxidoreductase 8115479 8362642 Cpin_6458 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003126063.1 8114271 R 485918 CDS YP_003126064.1 256425411 8362643 complement(8115599..8116630) 1 NC_013132.1 PFAM: xylose isomerase; KEGG: sde:Sde_1709 hypothetical protein; xylose isomerase 8116630 8362643 Cpin_6459 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003126064.1 8115599 R 485918 CDS YP_003126065.1 256425412 8362644 complement(8116842..8117894) 1 NC_013132.1 PFAM: bile acid:sodium symporter; KEGG: stm:STM4195 Na+-dependent transporter; bile acid:sodium symporter 8117894 8362644 Cpin_6460 Chitinophaga pinensis DSM 2588 bile acid:sodium symporter YP_003126065.1 8116842 R 485918 CDS YP_003126066.1 256425413 8362645 complement(8117932..8118846) 1 NC_013132.1 KEGG: sus:Acid_3344 demethylmenaquinone methyltransferase-like protein; demethylmenaquinone methyltransferase-like protein 8118846 8362645 Cpin_6461 Chitinophaga pinensis DSM 2588 demethylmenaquinone methyltransferase-like protein YP_003126066.1 8117932 R 485918 CDS YP_003126067.1 256425414 8362646 complement(8118916..8120154) 1 NC_013132.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 8120154 8362646 Cpin_6462 Chitinophaga pinensis DSM 2588 dihydroorotase YP_003126067.1 8118916 R 485918 CDS YP_003126068.1 256425415 8362647 complement(8120312..8121556) 1 NC_013132.1 KEGG: sus:Acid_6148 selenocysteine synthase (seryl- tRNASer selenium transferase)-like protein; selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein 8121556 8362647 Cpin_6463 Chitinophaga pinensis DSM 2588 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein YP_003126068.1 8120312 R 485918 CDS YP_003126069.1 256425416 8362648 complement(8121591..8122052) 1 NC_013132.1 PFAM: endoribonuclease L-PSP; KEGG: sus:Acid_6149 endoribonuclease L-PSP; endoribonuclease L-PSP 8122052 8362648 Cpin_6464 Chitinophaga pinensis DSM 2588 endoribonuclease L-PSP YP_003126069.1 8121591 R 485918 CDS YP_003126070.1 256425417 8362649 complement(8122063..8123598) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8123598 8362649 Cpin_6465 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126070.1 8122063 R 485918 CDS YP_003126071.1 256425418 8362650 complement(8123618..8127061) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8127061 8362650 Cpin_6466 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126071.1 8123618 R 485918 CDS YP_003126072.1 256425419 8362651 complement(8127118..8128173) 1 NC_013132.1 PFAM: FecR protein; KEGG: pzu:PHZ_c2234 transcriptional regulator; anti-FecI sigma factor FecR 8128173 8362651 Cpin_6467 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126072.1 8127118 R 485918 CDS YP_003126073.1 256425420 8362652 complement(8128219..8128839) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: abo:ABO_1639 RNA polymerase sigma factor RpoE; ECF subfamily RNA polymerase sigma-24 subunit 8128839 8362652 Cpin_6468 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126073.1 8128219 R 485918 CDS YP_003126074.1 256425421 8362653 complement(8128914..8129990) 1 NC_013132.1 KEGG: sus:Acid_2804 hypothetical protein; hypothetical protein 8129990 8362653 Cpin_6469 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126074.1 8128914 R 485918 CDS YP_003126075.1 256425422 8362654 complement(8130042..8130734) 1 NC_013132.1 PFAM: endonuclease V; KEGG: sde:Sde_3689 endonuclease V; deoxyribonuclease V 8130734 8362654 Cpin_6470 Chitinophaga pinensis DSM 2588 deoxyribonuclease V YP_003126075.1 8130042 R 485918 CDS YP_003126076.1 256425423 8362655 8130852..8131163 1 NC_013132.1 hypothetical protein 8131163 8362655 Cpin_6471 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126076.1 8130852 D 485918 CDS YP_003126077.1 256425424 8362656 complement(8131171..8131626) 1 NC_013132.1 KEGG: dac:Daci_4513 hypothetical protein; hypothetical protein 8131626 8362656 Cpin_6472 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126077.1 8131171 R 485918 CDS YP_003126078.1 256425425 8362657 8132238..8132660 1 NC_013132.1 KEGG: mxa:MXAN_0238 hypothetical protein; hypothetical protein 8132660 8362657 Cpin_6473 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126078.1 8132238 D 485918 CDS YP_003126079.1 256425426 8362658 complement(8133145..8134548) 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein; K01206 alpha-L- fucosidase; coagulation factor 5/8 type domain-containing protein 8134548 8362658 Cpin_6474 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003126079.1 8133145 R 485918 CDS YP_003126080.1 256425427 8362659 8134813..8135670 1 NC_013132.1 PFAM: OmpA/MotB domain protein; KEGG: pca:Pcar_1973 chemotaxis protein MotB; OmpA/MotB domain-containing protein 8135670 8362659 Cpin_6475 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003126080.1 8134813 D 485918 CDS YP_003126081.1 256425428 8362660 complement(8135730..8136458) 1 NC_013132.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ppw:PputW619_2726 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 8136458 8362660 Cpin_6476 Chitinophaga pinensis DSM 2588 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003126081.1 8135730 R 485918 CDS YP_003126082.1 256425429 8362661 8136612..8138327 1 NC_013132.1 KEGG: amc:MADE_01275 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; multi-sensor signal transduction histidine kinase 8138327 8362661 Cpin_6477 Chitinophaga pinensis DSM 2588 multi-sensor signal transduction histidine kinase YP_003126082.1 8136612 D 485918 CDS YP_003126083.1 256425430 8362662 complement(8138387..8138797) 1 NC_013132.1 PFAM: biopolymer transport protein ExbD/TolR; KEGG: nmu:Nmul_A1028 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 8138797 8362662 Cpin_6478 Chitinophaga pinensis DSM 2588 biopolymer transport protein ExbD/TolR YP_003126083.1 8138387 R 485918 CDS YP_003126084.1 256425431 8362663 complement(8138825..8139538) 1 NC_013132.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: pca:Pcar_1505 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel 8139538 8362663 Cpin_6479 Chitinophaga pinensis DSM 2588 MotA/TolQ/ExbB proton channel YP_003126084.1 8138825 R 485918 CDS YP_003126085.1 256425432 8362664 complement(8139658..8140902) 1 NC_013132.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 8140902 8362664 Cpin_6480 Chitinophaga pinensis DSM 2588 peptidase T YP_003126085.1 8139658 R 485918 CDS YP_003126086.1 256425433 8362665 8141511..8143820 1 NC_013132.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 8143820 8362665 Cpin_6481 Chitinophaga pinensis DSM 2588 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_003126086.1 8141511 D 485918 CDS YP_003126087.1 256425434 8362666 8143971..8144213 1 NC_013132.1 KEGG: lch:Lcho_4277 hypothetical protein; hypothetical protein 8144213 8362666 Cpin_6482 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126087.1 8143971 D 485918 CDS YP_003126088.1 256425435 8362667 8144231..8144626 1 NC_013132.1 PFAM: thioesterase superfamily protein; KEGG: shn:Shewana3_1733 thioesterase superfamily protein; thioesterase superfamily protein 8144626 8362667 Cpin_6483 Chitinophaga pinensis DSM 2588 thioesterase superfamily protein YP_003126088.1 8144231 D 485918 CDS YP_003126089.1 256425436 8362668 complement(8144721..8145149) 1 NC_013132.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sit:TM1040_3571 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 8145149 8362668 Cpin_6484 Chitinophaga pinensis DSM 2588 FKBP-type peptidylprolyl isomerase YP_003126089.1 8144721 R 485918 CDS YP_003126090.1 256425437 8362669 8145427..8146374 1 NC_013132.1 KEGG: sat:SYN_02707 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase; methionyl-tRNA formyltransferase 8146374 8362669 Cpin_6485 Chitinophaga pinensis DSM 2588 methionyl-tRNA formyltransferase YP_003126090.1 8145427 D 485918 CDS YP_003126091.1 256425438 8362670 8146497..8147735 1 NC_013132.1 PFAM: transposase IS4 family protein; KEGG: dal:Dalk_1464 transposase IS4 family protein; transposase IS4 family protein 8147735 8362670 Cpin_6486 Chitinophaga pinensis DSM 2588 transposase IS4 family protein YP_003126091.1 8146497 D 485918 CDS YP_003126092.1 256425439 8362671 complement(8148053..8149078) 1 NC_013132.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: GH24424 gene product from transcript GH24424- RA; peptidoglycan-binding LysM 8149078 8362671 Cpin_6487 Chitinophaga pinensis DSM 2588 peptidoglycan-binding LysM YP_003126092.1 8148053 R 485918 CDS YP_003126093.1 256425440 8362672 complement(8149141..8150535) 1 NC_013132.1 PFAM: Fmu (Sun) domain protein; KEGG: vfm:VFMJ11_1352 ribosomal RNA small subunit methyltransferase F; Fmu (Sun) domain-containing protein 8150535 8362672 Cpin_6488 Chitinophaga pinensis DSM 2588 Fmu (Sun) domain-containing protein YP_003126093.1 8149141 R 485918 CDS YP_003126094.1 256425441 8362673 complement(8150593..8151987) 1 NC_013132.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pmy:Pmen_4433 NAD(P)(+) transhydrogenase (AB- specific); NAD(P)(+) transhydrogenase 8151987 8362673 Cpin_6489 Chitinophaga pinensis DSM 2588 NAD(P)(+) transhydrogenase YP_003126094.1 8150593 R 485918 CDS YP_003126095.1 256425442 8362674 complement(8152008..8152322) 1 NC_013132.1 KEGG: eba:ebA4498 pyridine nucleotide transhydrogenase subunit alpha; pyridine nucleotide transhydrogenase subunit alpha 8152322 8362674 Cpin_6490 Chitinophaga pinensis DSM 2588 pyridine nucleotide transhydrogenase subunit alpha YP_003126095.1 8152008 R 485918 CDS YP_003126096.1 256425443 8362675 complement(8152358..8153488) 1 NC_013132.1 PFAM: alanine dehydrogenase; KEGG: tmz:Tmz1t_1641 alanine dehydrogenase; NAD(P)(+) transhydrogenase 8153488 8362675 Cpin_6491 Chitinophaga pinensis DSM 2588 NAD(P)(+) transhydrogenase YP_003126096.1 8152358 R 485918 CDS YP_003126097.1 256425444 8362676 8153669..8155126 1 NC_013132.1 KEGG: sat:SYN_02193 cytoplasmic protein; hypothetical protein 8155126 8362676 Cpin_6492 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126097.1 8153669 D 485918 CDS YP_003126098.1 256425445 8362677 complement(8155171..8156268) 1 NC_013132.1 hypothetical protein 8156268 8362677 Cpin_6493 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126098.1 8155171 R 485918 CDS YP_003126099.1 256425446 8362678 complement(8156471..8157250) 1 NC_013132.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: gbm:Gbem_0815 formamidopyrimidine-DNA glycolase, H2TH DNA binding; DNA-formamidopyrimidine glycosylase 8157250 8362678 Cpin_6494 Chitinophaga pinensis DSM 2588 DNA-formamidopyrimidine glycosylase YP_003126099.1 8156471 R 485918 CDS YP_003126100.1 256425447 8362679 complement(8157260..8157973) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8157973 8362679 Cpin_6495 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126100.1 8157260 R 485918 CDS YP_003126101.1 256425448 8362680 complement(8157978..8158718) 1 NC_013132.1 PFAM: protein of unknown function DUF72; KEGG: nis:NIS_1306 hypothetical protein; hypothetical protein 8158718 8362680 Cpin_6496 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126101.1 8157978 R 485918 CDS YP_003126102.1 256425449 8362681 complement(8158758..8160086) 1 NC_013132.1 KEGG: mxa:MXAN_1293 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; protoporphyrinogen oxidase 8160086 8362681 Cpin_6497 Chitinophaga pinensis DSM 2588 protoporphyrinogen oxidase YP_003126102.1 8158758 R 485918 CDS YP_003126103.1 256425450 8362682 complement(8160112..8161140) 1 NC_013132.1 KEGG: ppg:PputGB1_0785 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase; ferrochelatase 8161140 8362682 Cpin_6498 Chitinophaga pinensis DSM 2588 ferrochelatase YP_003126103.1 8160112 R 485918 CDS YP_003126104.1 256425451 8362683 8161316..8162638 1 NC_013132.1 KEGG: ilo:IL0926 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; glutamyl-tRNA reductase 8162638 8362683 Cpin_6499 Chitinophaga pinensis DSM 2588 glutamyl-tRNA reductase YP_003126104.1 8161316 D 485918 CDS YP_003126105.1 256425452 8362684 8162642..8163565 1 NC_013132.1 KEGG: pca:Pcar_3063 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase; porphobilinogen deaminase 8163565 8362684 Cpin_6500 Chitinophaga pinensis DSM 2588 porphobilinogen deaminase YP_003126105.1 8162642 D 485918 CDS YP_003126106.1 256425453 8362685 8163552..8164298 1 NC_013132.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: UROS; uroporphyrinogen III synthase; uroporphyrinogen III synthase HEM4 8164298 8362685 Cpin_6501 Chitinophaga pinensis DSM 2588 uroporphyrinogen III synthase HEM4 YP_003126106.1 8163552 D 485918 CDS YP_003126107.1 256425454 8362686 8164304..8165329 1 NC_013132.1 KEGG: urod; uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 8165329 8362686 Cpin_6502 Chitinophaga pinensis DSM 2588 uroporphyrinogen decarboxylase YP_003126107.1 8164304 D 485918 CDS YP_003126108.1 256425455 8362687 8165342..8166253 1 NC_013132.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 8166253 8362687 Cpin_6503 Chitinophaga pinensis DSM 2588 coproporphyrinogen III oxidase YP_003126108.1 8165342 D 485918 CDS YP_003126109.1 256425456 8362688 8166276..8167241 1 NC_013132.1 PFAM: delta-aminolevulinic acid dehydratase; KEGG: hypothetical protein; porphobilinogen synthase 8167241 8362688 Cpin_6504 Chitinophaga pinensis DSM 2588 porphobilinogen synthase YP_003126109.1 8166276 D 485918 CDS YP_003126110.1 256425457 8362689 8167284..8168573 1 NC_013132.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: ilo:IL2245 glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde-2,1-aminomutase 8168573 8362689 Cpin_6505 Chitinophaga pinensis DSM 2588 glutamate-1-semialdehyde-2,1-aminomutase YP_003126110.1 8167284 D 485918 CDS YP_003126111.1 256425458 8362690 complement(8168645..8169439) 1 NC_013132.1 PFAM: phospholipase/carboxylesterase; KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase; phospholipase/carboxylesterase 8169439 8362690 Cpin_6506 Chitinophaga pinensis DSM 2588 phospholipase/carboxylesterase YP_003126111.1 8168645 R 485918 CDS YP_003126112.1 256425459 8362691 complement(8169664..8170455) 1 NC_013132.1 KEGG: wsu:WS2183 hypothetical protein; O-methyltransferase-like protein 8170455 8362691 Cpin_6507 Chitinophaga pinensis DSM 2588 O-methyltransferase-like protein YP_003126112.1 8169664 R 485918 CDS YP_003126113.1 256425460 8362692 complement(8170470..8171210) 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_1105 glycosyl transferase family 2; family 2 glycosyl transferase 8171210 8362692 Cpin_6508 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003126113.1 8170470 R 485918 CDS YP_003126114.1 256425461 8362693 8171355..8171477 1 NC_013132.1 hypothetical protein 8171477 8362693 Cpin_6509 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126114.1 8171355 D 485918 CDS YP_003126115.1 256425462 8362694 8171482..8172732 1 NC_013132.1 KEGG: fip; filament-interacting protein; hypothetical protein 8172732 8362694 Cpin_6510 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126115.1 8171482 D 485918 CDS YP_003126116.1 256425463 8362695 8172906..8173853 1 NC_013132.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bba:Bd2516 redox-sensitive transcriptional activator; LysR family transcriptional regulator 8173853 8362695 Cpin_6511 Chitinophaga pinensis DSM 2588 LysR family transcriptional regulator YP_003126116.1 8172906 D 485918 CDS YP_003126117.1 256425464 8362696 complement(8173926..8174729) 1 NC_013132.1 PFAM: peptidase M48 Ste24p; KEGG: ppd:Ppro_3278 peptidase M48, Ste24p; peptidase M48 Ste24p 8174729 8362696 Cpin_6512 Chitinophaga pinensis DSM 2588 peptidase M48 Ste24p YP_003126117.1 8173926 R 485918 CDS YP_003126118.1 256425465 8362697 complement(8174930..8175583) 1 NC_013132.1 PFAM: protein of unknown function DUF205; KEGG: gur:Gura_3922 hypothetical protein; hypothetical protein 8175583 8362697 Cpin_6513 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126118.1 8174930 R 485918 CDS YP_003126119.1 256425466 8362698 complement(8175716..8176573) 1 NC_013132.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 8176573 prmA 8362698 prmA Chitinophaga pinensis DSM 2588 50S ribosomal protein L11 YP_003126119.1 8175716 R 485918 CDS YP_003126120.1 256425467 8362699 8176699..8177286 1 NC_013132.1 hypothetical protein 8177286 8362699 Cpin_6515 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126120.1 8176699 D 485918 CDS YP_003126121.1 256425468 8362700 complement(8177463..8178275) 1 NC_013132.1 PFAM: NIPSNAP family containing protein; KEGG: sus:Acid_2822 NIPSNAP family protein; NIPSNAP family containing protein 8178275 8362700 Cpin_6516 Chitinophaga pinensis DSM 2588 NIPSNAP family containing protein YP_003126121.1 8177463 R 485918 CDS YP_003126122.1 256425469 8362701 complement(8178449..8180830) 1 NC_013132.1 KEGG: sal:Sala_0543 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; polynucleotide phosphorylase, phosphorolytic RNA- binding, bacterial/organelle-type; exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polyribonucleotide nucleotidyltransferase 8180830 8362701 Cpin_6517 Chitinophaga pinensis DSM 2588 polyribonucleotide nucleotidyltransferase YP_003126122.1 8178449 R 485918 CDS YP_003126123.1 256425470 8362702 complement(8180916..8181188) 1 NC_013132.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: ngk:NGK_0320 30S ribosomal protein S15; 30S ribosomal protein S15 8181188 8362702 Cpin_6518 Chitinophaga pinensis DSM 2588 30S ribosomal protein S15 YP_003126123.1 8180916 R 485918 CDS YP_003126124.1 256425471 8362703 complement(8181423..8182115) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gbm:Gbem_1287 cell division ATP-binding protein FtsE; ABC transporter 8182115 8362703 Cpin_6519 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126124.1 8181423 R 485918 CDS YP_003126125.1 256425472 8362704 8182417..8182797 1 NC_013132.1 PFAM: Penicillinase repressor; KEGG: smt:Smal_3667 transcriptional repressor, CopY family; CopY family transcriptional regulator 8182797 8362704 Cpin_6520 Chitinophaga pinensis DSM 2588 CopY family transcriptional regulator YP_003126125.1 8182417 D 485918 CDS YP_003126126.1 256425473 8362705 8182794..8184035 1 NC_013132.1 TIGRFAM: TonB family protein; PFAM: peptidase M56 BlaR1; KEGG: swd:Swoo_3738 TonB family protein; TonB family protein 8184035 8362705 Cpin_6521 Chitinophaga pinensis DSM 2588 TonB family protein YP_003126126.1 8182794 D 485918 CDS YP_003126127.1 256425474 8362706 complement(8184116..8185294) 1 NC_013132.1 PFAM: AIR synthase related protein domain protein; KEGG: predicted protein; K01933 phosphoribosylformylglycinamidine cyclo-ligase; phosphoribosylformylglycinamidine cyclo-ligase 8185294 8362706 Cpin_6522 Chitinophaga pinensis DSM 2588 phosphoribosylformylglycinamidine cyclo-ligase YP_003126127.1 8184116 R 485918 CDS YP_003126128.1 256425475 8362707 8185404..8186339 1 NC_013132.1 TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: riboflavin kinase; FAD synthetase; KEGG: sat:SYN_01948 riboflavin kinase / FMN adenylyltransferase; riboflavin biosynthesis protein RibF 8186339 8362707 Cpin_6523 Chitinophaga pinensis DSM 2588 riboflavin biosynthesis protein RibF YP_003126128.1 8185404 D 485918 CDS YP_003126129.1 256425476 8362708 complement(8186340..8187335) 1 NC_013132.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: bba:Bd1464 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 8187335 8362708 Cpin_6524 Chitinophaga pinensis DSM 2588 DNA polymerase III subunit delta YP_003126129.1 8186340 R 485918 CDS YP_003126130.1 256425477 8362709 complement(8187342..8188067) 1 NC_013132.1 KEGG: sit:TM1040_1688 hypothetical protein; hypothetical protein 8188067 8362709 Cpin_6525 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126130.1 8187342 R 485918 CDS YP_003126131.1 256425478 8362710 8188174..8189136 1 NC_013132.1 KEGG: viral A-type inclusion protein; hypothetical protein 8189136 8362710 Cpin_6526 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126131.1 8188174 D 485918 CDS YP_003126132.1 256425479 8362711 8189438..8189836 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sit:TM1040_0829 response regulator receiver protein; response regulator receiver protein 8189836 8362711 Cpin_6527 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003126132.1 8189438 D 485918 CDS YP_003126133.1 256425480 8362712 complement(8190013..8191659) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU14430 hypothetical protein; ABC transporter 8191659 8362712 Cpin_6528 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126133.1 8190013 R 485918 CDS YP_003126134.1 256425481 8362713 8191745..8192467 1 NC_013132.1 KEGG: cak:Caul_2555 hypothetical protein; hypothetical protein 8192467 8362713 Cpin_6529 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126134.1 8191745 D 485918 CDS YP_003126135.1 256425482 8362714 8192544..8193209 1 NC_013132.1 PFAM: carbonic anhydrase; KEGG: carbonic anhydrase family protein; K01672 carbonic anhydrase; carbonate dehydratase 8193209 8362714 Cpin_6530 Chitinophaga pinensis DSM 2588 carbonate dehydratase YP_003126135.1 8192544 D 485918 CDS YP_003126136.1 256425483 8362715 8193206..8194024 1 NC_013132.1 KEGG: rce:RC1_3325 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 8194024 8362715 Cpin_6531 Chitinophaga pinensis DSM 2588 glutamate racemase YP_003126136.1 8193206 D 485918 CDS YP_003126137.1 256425484 8362716 complement(8194213..8196378) 1 NC_013132.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: asa:ASA_3983 protease II; oligopeptidase B 8196378 8362716 Cpin_6532 Chitinophaga pinensis DSM 2588 oligopeptidase B YP_003126137.1 8194213 R 485918 CDS YP_003126138.1 256425485 8362717 complement(8196385..8197767) 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: sus:Acid_0576 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 8197767 8362717 Cpin_6533 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003126138.1 8196385 R 485918 CDS YP_003126139.1 256425486 8362718 complement(8197879..8198643) 1 NC_013132.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: bba:Bd0026 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; succinate dehydrogenase/fumarate reductase iron-sulfur subunit 8198643 8362718 Cpin_6534 Chitinophaga pinensis DSM 2588 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_003126139.1 8197879 R 485918 CDS YP_003126140.1 256425487 8362719 complement(8198672..8200645) 1 NC_013132.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 8200645 sdhA 8362719 sdhA Chitinophaga pinensis DSM 2588 succinate dehydrogenase flavoprotein subunit YP_003126140.1 8198672 R 485918 CDS YP_003126141.1 256425488 8362720 complement(8200665..8201354) 1 NC_013132.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: bba:Bd0024 cytochrome b subunit; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 8201354 8362720 Cpin_6536 Chitinophaga pinensis DSM 2588 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_003126141.1 8200665 R 485918 CDS YP_003126142.1 256425489 8362721 complement(8201609..8202172) 1 NC_013132.1 hypothetical protein 8202172 8362721 Cpin_6537 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126142.1 8201609 R 485918 CDS YP_003126143.1 256425490 8362722 complement(8202261..8203073) 1 NC_013132.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 8203073 murQ 8362722 murQ Chitinophaga pinensis DSM 2588 N-acetylmuramic acid 6-phosphate etherase YP_003126143.1 8202261 R 485918 CDS YP_003126144.1 256425491 8362723 complement(8203089..8203931) 1 NC_013132.1 KEGG: bmv:BMASAVP1_A3445 BadF/BadG/BcrA/BcrD ATPase family protein; N-acetylglucosamine kinase-like protein 8203931 8362723 Cpin_6539 Chitinophaga pinensis DSM 2588 N-acetylglucosamine kinase-like protein YP_003126144.1 8203089 R 485918 CDS YP_003126145.1 256425492 8362724 8204031..8205638 1 NC_013132.1 KEGG: aba:Acid345_2676 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 8205638 8362724 Cpin_6540 Chitinophaga pinensis DSM 2588 carboxyl-terminal protease YP_003126145.1 8204031 D 485918 CDS YP_003126146.1 256425493 8362725 complement(8205951..8206169) 1 NC_013132.1 KEGG: sal:Sala_1285 hypothetical protein; hypothetical protein 8206169 8362725 Cpin_6541 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126146.1 8205951 R 485918 CDS YP_003126147.1 256425494 8362726 complement(8206247..8207572) 1 NC_013132.1 KEGG: glo:Glov_2126 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; SMART: AAA ATPase; small GTP-binding protein 8207572 8362726 Cpin_6542 Chitinophaga pinensis DSM 2588 small GTP-binding protein YP_003126147.1 8206247 R 485918 CDS YP_003126148.1 256425495 8362727 complement(8207585..8208454) 1 NC_013132.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: ppd:Ppro_1726 GTP-binding protein Era; GTP-binding protein Era 8208454 8362727 Cpin_6543 Chitinophaga pinensis DSM 2588 GTP-binding protein Era YP_003126148.1 8207585 R 485918 CDS YP_003126149.1 256425496 8362729 complement(8208840..8209019) 1 NC_013132.1 hypothetical protein 8209019 8362729 Cpin_6544 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126149.1 8208840 R 485918 CDS YP_003126150.1 256425497 8362730 complement(8209019..8209165) 1 NC_013132.1 hypothetical protein 8209165 8362730 Cpin_6545 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126150.1 8209019 R 485918 CDS YP_003126151.1 256425498 8362731 complement(8209306..8209698) 1 NC_013132.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: gbm:Gbem_3975 single-strand binding protein; single-strand binding protein 8209698 8362731 Cpin_6546 Chitinophaga pinensis DSM 2588 single-strand binding protein YP_003126151.1 8209306 R 485918 CDS YP_003126152.1 256425499 8362732 8210045..8212420 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sus:Acid_3639 TonB-dependent receptor; TonB-dependent receptor 8212420 8362732 Cpin_6547 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126152.1 8210045 D 485918 CDS YP_003126153.1 256425500 8362733 8212431..8212748 1 NC_013132.1 hypothetical protein 8212748 8362733 Cpin_6548 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126153.1 8212431 D 485918 CDS YP_003126154.1 256425501 8362734 8212750..8214309 1 NC_013132.1 hypothetical protein 8214309 8362734 Cpin_6549 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126154.1 8212750 D 485918 CDS YP_003126155.1 256425502 8362735 complement(8214389..8215720) 1 NC_013132.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 8215720 8362735 Cpin_6550 Chitinophaga pinensis DSM 2588 argininosuccinate lyase YP_003126155.1 8214389 R 485918 CDS YP_003126156.1 256425503 8362736 complement(8215723..8216787) 1 NC_013132.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mxa:MXAN_5106 peptidase, M20A family; peptidase M20 8216787 8362736 Cpin_6551 Chitinophaga pinensis DSM 2588 peptidase M20 YP_003126156.1 8215723 R 485918 CDS YP_003126157.1 256425504 8362737 complement(8216792..8217580) 1 NC_013132.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: dds:Ddes_0190 acetylglutamate kinase; acetylglutamate kinase 8217580 8362737 Cpin_6552 Chitinophaga pinensis DSM 2588 acetylglutamate kinase YP_003126157.1 8216792 R 485918 CDS YP_003126158.1 256425505 8362738 complement(8217587..8218543) 1 NC_013132.1 PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: mxa:MXAN_5104 N-acetylornithine carbamoyltransferase; N-acetylornithine carbamoyltransferase 8218543 8362738 Cpin_6553 Chitinophaga pinensis DSM 2588 N-acetylornithine carbamoyltransferase YP_003126158.1 8217587 R 485918 CDS YP_003126159.1 256425506 8362739 complement(8218574..8219704) 1 NC_013132.1 PFAM: aminotransferase class-III; KEGG: aav:Aave_1164 acetylornithine and succinylornithine aminotransferase; class III aminotransferase 8219704 8362739 Cpin_6554 Chitinophaga pinensis DSM 2588 class III aminotransferase YP_003126159.1 8218574 R 485918 CDS YP_003126160.1 256425507 8362740 complement(8219771..8220754) 1 NC_013132.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 8220754 argC 8362740 argC Chitinophaga pinensis DSM 2588 N-acetyl-gamma-glutamyl-phosphate reductase YP_003126160.1 8219771 R 485918 CDS YP_003126161.1 256425508 8362741 complement(8220778..8221977) 1 NC_013132.1 KEGG: mxa:MXAN_5108 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; ExsB family protein; argininosuccinate synthase 8221977 8362741 Cpin_6556 Chitinophaga pinensis DSM 2588 argininosuccinate synthase YP_003126161.1 8220778 R 485918 CDS YP_003126162.1 256425509 8362742 complement(8222047..8222871) 1 NC_013132.1 KEGG: pau:PA14_63350 GNAT family acetyltransferase; hypothetical protein 8222871 8362742 Cpin_6557 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126162.1 8222047 R 485918 CDS YP_003126163.1 256425510 8362743 complement(8223321..8225384) 1 NC_013132.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: sus:Acid_1398 coagulation factor 5/8 type domain-containing protein; coagulation factor 5/8 type domain-containing protein 8225384 8362743 Cpin_6558 Chitinophaga pinensis DSM 2588 coagulation factor 5/8 type domain-containing protein YP_003126163.1 8223321 R 485918 CDS YP_003126164.1 256425511 8362744 8225697..8227091 1 NC_013132.1 PFAM: oxidoreductase domain protein; KEGG: smt:Smal_3812 oxidoreductase domain protein; oxidoreductase domain-containing protein 8227091 8362744 Cpin_6559 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003126164.1 8225697 D 485918 CDS YP_003126165.1 256425512 8362745 complement(8227138..8228454) 1 NC_013132.1 TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: xca:xccb100_0784 glucose / galactose porter; glucose/galactose transporter 8228454 8362745 Cpin_6560 Chitinophaga pinensis DSM 2588 glucose/galactose transporter YP_003126165.1 8227138 R 485918 CDS YP_003126166.1 256425513 8362746 8228789..8230459 1 NC_013132.1 KEGG: sml:Smlt2567 transmembrane transporter; transmembrane transporter 8230459 8362746 Cpin_6561 Chitinophaga pinensis DSM 2588 transmembrane transporter YP_003126166.1 8228789 D 485918 CDS YP_003126167.1 256425514 8362747 8230431..8231396 1 NC_013132.1 PFAM: ROK family protein; KEGG: bcr:BCAH187_A4396 glucokinase; ROK family protein 8231396 8362747 Cpin_6562 Chitinophaga pinensis DSM 2588 ROK family protein YP_003126167.1 8230431 D 485918 CDS YP_003126168.1 256425515 8362748 8231435..8232487 1 NC_013132.1 PFAM: peptidase T2 asparaginase 2; KEGG: xca:xccb100_1239 exported N(4)-(beta-N- acetylglucosaminyl)-L-asparaginase; N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 8232487 8362748 Cpin_6563 Chitinophaga pinensis DSM 2588 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase YP_003126168.1 8231435 D 485918 CDS YP_003126169.1 256425516 8362749 8232496..8233257 1 NC_013132.1 PFAM: CutC family protein; KEGG: cvi:CV_1414 copper homeostasis protein; CutC family protein 8233257 8362749 Cpin_6564 Chitinophaga pinensis DSM 2588 CutC family protein YP_003126169.1 8232496 D 485918 CDS YP_003126170.1 256425517 8362750 complement(8233348..8234814) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8234814 8362750 Cpin_6565 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126170.1 8233348 R 485918 CDS YP_003126171.1 256425518 8362751 complement(8234829..8238311) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; Secretin/TonB short domain; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8238311 8362751 Cpin_6566 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126171.1 8234829 R 485918 CDS YP_003126172.1 256425519 8362752 complement(8238492..8239589) 1 NC_013132.1 PFAM: FecR protein; KEGG: FecR protein; anti-FecI sigma factor FecR 8239589 8362752 Cpin_6567 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126172.1 8238492 R 485918 CDS YP_003126173.1 256425520 8362753 complement(8239681..8240298) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: aba:Acid345_1342 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 8240298 8362753 Cpin_6568 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126173.1 8239681 R 485918 CDS YP_003126174.1 256425521 8362754 complement(8240622..8241032) 1 NC_013132.1 hypothetical protein 8241032 8362754 Cpin_6569 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126174.1 8240622 R 485918 CDS YP_003126175.1 256425522 8362755 8241368..8243293 1 NC_013132.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; LmbE family protein; KEGG: glucosamine-6-phosphate isomerase family protein; glucosamine-6-phosphate deaminase 8243293 8362755 Cpin_6570 Chitinophaga pinensis DSM 2588 glucosamine-6-phosphate deaminase YP_003126175.1 8241368 D 485918 CDS YP_003126176.1 256425523 8362756 8243380..8243814 1 NC_013132.1 KEGG: mxa:MXAN_1364 hypothetical protein; hypothetical protein 8243814 8362756 Cpin_6571 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126176.1 8243380 D 485918 CDS YP_003126177.1 256425524 8362757 8243938..8244831 1 NC_013132.1 TIGRFAM: methyltransferase; KEGG: dal:Dalk_1638 methyltransferase; methyltransferase 8244831 8362757 Cpin_6572 Chitinophaga pinensis DSM 2588 methyltransferase YP_003126177.1 8243938 D 485918 CDS YP_003126178.1 256425525 8362758 8245010..8246083 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aba:Acid345_2686 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 8246083 8362758 Cpin_6573 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003126178.1 8245010 D 485918 CDS YP_003126179.1 256425526 8362759 complement(8246151..8247167) 1 NC_013132.1 KEGG: ppu:PP_1904 UDP-N- acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 8247167 8362759 Cpin_6574 Chitinophaga pinensis DSM 2588 UDP-N-acetylenolpyruvoylglucosamine reductase YP_003126179.1 8246151 R 485918 CDS YP_003126180.1 256425527 8362760 complement(8247239..8249686) 1 NC_013132.1 KEGG: bsu:BSU15710 primosome assembly protein PriA; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; primosomal protein N' 8249686 8362760 Cpin_6575 Chitinophaga pinensis DSM 2588 primosomal protein N' YP_003126180.1 8247239 R 485918 CDS YP_003126181.1 256425528 8362761 complement(8249695..8250435) 1 NC_013132.1 KEGG: sat:SYN_01275 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; 1-acylglycerol-3-phosphate O-acyltransferase 8250435 8362761 Cpin_6576 Chitinophaga pinensis DSM 2588 1-acylglycerol-3-phosphate O-acyltransferase YP_003126181.1 8249695 R 485918 CDS YP_003126182.1 256425529 8362762 complement(8250501..8250956) 1 NC_013132.1 KEGG: predicted protein; hypothetical protein 8250956 8362762 Cpin_6577 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126182.1 8250501 R 485918 CDS YP_003126183.1 256425530 8362763 8251067..8252344 1 NC_013132.1 KEGG: bha:BH1351 hypothetical protein; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 8252344 8362763 Cpin_6578 Chitinophaga pinensis DSM 2588 MiaB-like tRNA modifying protein YP_003126183.1 8251067 D 485918 CDS YP_003126184.1 256425531 8362767 8253187..8254182 1 NC_013132.1 KEGG: cff:CFF8240_0878 hypothetical protein; hypothetical protein 8254182 8362767 Cpin_6579 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126184.1 8253187 D 485918 CDS YP_003126185.1 256425532 8362768 complement(8254330..8256489) 1 NC_013132.1 PFAM: sodium/hydrogen exchanger; KEGG: bha:BH2844 Na+/H+ antiporter; sodium/hydrogen exchanger 8256489 8362768 Cpin_6580 Chitinophaga pinensis DSM 2588 sodium/hydrogen exchanger YP_003126185.1 8254330 R 485918 CDS YP_003126186.1 256425533 8362769 8256653..8256961 1 NC_013132.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: hypothetical protein; ATP-dependent Clp protease adaptor protein ClpS 8256961 8362769 Cpin_6581 Chitinophaga pinensis DSM 2588 ATP-dependent Clp protease adaptor protein ClpS YP_003126186.1 8256653 D 485918 CDS YP_003126187.1 256425534 8362770 8256961..8257605 1 NC_013132.1 KEGG: sat:SYN_02379 leucyl/phenylalanyl-tRNA-- protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 8257605 8362770 Cpin_6582 Chitinophaga pinensis DSM 2588 leucyl/phenylalanyl-tRNA/protein transferase YP_003126187.1 8256961 D 485918 CDS YP_003126188.1 256425535 8362771 complement(8257660..8258673) 1 NC_013132.1 hypothetical protein 8258673 8362771 Cpin_6583 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126188.1 8257660 R 485918 CDS YP_003126189.1 256425536 8362772 8258719..8259384 1 NC_013132.1 PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor; DtxR family iron (metal) dependent repressor 8259384 8362772 Cpin_6584 Chitinophaga pinensis DSM 2588 DtxR family iron (metal) dependent repressor YP_003126189.1 8258719 D 485918 CDS YP_003126190.1 256425537 8362773 8259505..8261382 1 NC_013132.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; UspA domain protein; KEGG: sus:Acid_5624 Mn2+/Fe2+ transporter; NRAMP family Mn2+/Fe2+ transporter 8261382 8362773 Cpin_6585 Chitinophaga pinensis DSM 2588 NRAMP family Mn2+/Fe2+ transporter YP_003126190.1 8259505 D 485918 CDS YP_003126191.1 256425538 8362774 complement(8261607..8262347) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: aba:Acid345_3487 transcriptional regulator, LytR/AlgR family; LytTR family two component transcriptional regulator 8262347 8362774 Cpin_6586 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003126191.1 8261607 R 485918 CDS YP_003126192.1 256425539 8362775 complement(8262325..8263383) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sus:Acid_5581 signal transduction histidine kinase, LytS; signal transduction histidine kinase LytS 8263383 8362775 Cpin_6587 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003126192.1 8262325 R 485918 CDS YP_003126193.1 256425540 8362776 complement(8263409..8263762) 1 NC_013132.1 hypothetical protein 8263762 8362776 Cpin_6588 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126193.1 8263409 R 485918 CDS YP_003126194.1 256425541 8362777 complement(8263809..8264615) 1 NC_013132.1 KEGG: sus:Acid_5580 transmembrane protein; transmembrane protein 8264615 8362777 Cpin_6589 Chitinophaga pinensis DSM 2588 transmembrane protein YP_003126194.1 8263809 R 485918 CDS YP_003126195.1 256425542 8362778 complement(8264731..8265438) 1 NC_013132.1 PFAM: lipolytic protein G-D-S-L family; KEGG: smt:Smal_3367 lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein 8265438 8362778 Cpin_6590 Chitinophaga pinensis DSM 2588 G-D-S-L family lipolytic protein YP_003126195.1 8264731 R 485918 CDS YP_003126196.1 256425543 8362779 8265509..8266774 1 NC_013132.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: bcy:Bcer98_3277 isocitrate dehydrogenase; isocitrate dehydrogenase 8266774 8362779 Cpin_6591 Chitinophaga pinensis DSM 2588 isocitrate dehydrogenase YP_003126196.1 8265509 D 485918 CDS YP_003126197.1 256425544 8362780 8266964..8268196 1 NC_013132.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 8268196 8362780 Cpin_6592 Chitinophaga pinensis DSM 2588 isocitrate dehydrogenase YP_003126197.1 8266964 D 485918 CDS YP_003126198.1 256425545 8362781 complement(8268345..8269361) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: kpe:KPK_3721 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 8269361 8362781 Cpin_6593 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003126198.1 8268345 R 485918 CDS YP_003126199.1 256425546 8362782 complement(8269670..8270521) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 8270521 8362782 Cpin_6594 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126199.1 8269670 R 485918 CDS YP_003126200.1 256425547 8362783 complement(8270592..8272253) 1 NC_013132.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sat:SYN_00032 cell wall degradation protein; ErfK/YbiS/YcfS/YnhG family protein 8272253 8362783 Cpin_6595 Chitinophaga pinensis DSM 2588 ErfK/YbiS/YcfS/YnhG family protein YP_003126200.1 8270592 R 485918 CDS YP_003126201.1 256425548 8362784 complement(8272485..8273312) 1 NC_013132.1 hypothetical protein 8273312 8362784 Cpin_6596 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126201.1 8272485 R 485918 CDS YP_003126202.1 256425549 8362785 complement(8273379..8273978) 1 NC_013132.1 PFAM: Heavy metal transport/detoxification protein; KEGG: sfu:Sfum_3223 heavy metal translocating P- type ATPase; heavy metal transport/detoxification protein 8273978 8362785 Cpin_6597 Chitinophaga pinensis DSM 2588 heavy metal transport/detoxification protein YP_003126202.1 8273379 R 485918 CDS YP_003126203.1 256425550 8362786 complement(8274012..8274401) 1 NC_013132.1 hypothetical protein 8274401 8362786 Cpin_6598 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126203.1 8274012 R 485918 CDS YP_003126204.1 256425551 8362787 complement(8274441..8274653) 1 NC_013132.1 hypothetical protein 8274653 8362787 Cpin_6599 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126204.1 8274441 R 485918 CDS YP_003126205.1 256425552 8362788 complement(8274829..8276793) 1 NC_013132.1 hypothetical protein 8276793 8362788 Cpin_6600 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126205.1 8274829 R 485918 CDS YP_003126206.1 256425553 8362789 complement(8276954..8277775) 1 NC_013132.1 TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: hypothetical protein; purine nucleoside phosphorylase I 8277775 8362789 Cpin_6601 Chitinophaga pinensis DSM 2588 purine nucleoside phosphorylase I YP_003126206.1 8276954 R 485918 CDS YP_003126207.1 256425554 8362790 8277884..8279098 1 NC_013132.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 8279098 sucC 8362790 sucC Chitinophaga pinensis DSM 2588 succinyl-CoA synthetase subunit beta YP_003126207.1 8277884 D 485918 CDS YP_003126208.1 256425555 8362791 8279305..8280321 1 NC_013132.1 hypothetical protein 8280321 8362791 Cpin_6603 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126208.1 8279305 D 485918 CDS YP_003126209.1 256425556 8362792 complement(8280376..8280996) 1 NC_013132.1 hypothetical protein 8280996 8362792 Cpin_6604 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126209.1 8280376 R 485918 CDS YP_003126210.1 256425557 8362793 complement(8281003..8281392) 1 NC_013132.1 hypothetical protein 8281392 8362793 Cpin_6605 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126210.1 8281003 R 485918 CDS YP_003126211.1 256425558 8362794 complement(8281575..8282048) 1 NC_013132.1 PFAM: protein of unknown function DUF583; KEGG: pzu:PHZ_c1838 hypothetical protein; hypothetical protein 8282048 8362794 Cpin_6606 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126211.1 8281575 R 485918 CDS YP_003126212.1 256425559 8362795 complement(8282243..8282647) 1 NC_013132.1 hypothetical protein 8282647 8362795 Cpin_6607 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126212.1 8282243 R 485918 CDS YP_003126213.1 256425560 8362796 8283013..8285943 1 NC_013132.1 SMART: hypothetical protein; KEGG: mmw:Mmwyl1_2196 Tol-Pal system YbgF; hypothetical protein 8285943 8362796 Cpin_6608 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126213.1 8283013 D 485918 CDS YP_003126214.1 256425561 8362797 8286149..8288533 1 NC_013132.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: pna:Pnap_2061 glycosyl transferase, family 51; glycosyl transferase family protein 8288533 8362797 Cpin_6609 Chitinophaga pinensis DSM 2588 glycosyl transferase family protein YP_003126214.1 8286149 D 485918 CDS YP_003126215.1 256425562 8362798 complement(8288607..8289554) 1 NC_013132.1 PFAM: peptidase M28; peptidase M20; KEGG: net:Neut_1379 peptidase M28; peptidase M28 8289554 8362798 Cpin_6610 Chitinophaga pinensis DSM 2588 peptidase M28 YP_003126215.1 8288607 R 485918 CDS YP_003126216.1 256425563 8362799 complement(8289646..8291499) 1 NC_013132.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: dal:Dalk_4133 YidC translocase/secretase; hypothetical protein 8291499 8362799 Cpin_6611 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126216.1 8289646 R 485918 CDS YP_003126217.1 256425564 8362800 complement(8291617..8293269) 1 NC_013132.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 8293269 pyrG 8362800 pyrG Chitinophaga pinensis DSM 2588 CTP synthetase YP_003126217.1 8291617 R 485918 CDS YP_003126218.1 256425565 8362801 8293572..8294087 1 NC_013132.1 PFAM: thioesterase superfamily protein; KEGG: aba:Acid345_3253 thioesterase superfamily; thioesterase superfamily protein 8294087 8362801 Cpin_6613 Chitinophaga pinensis DSM 2588 thioesterase superfamily protein YP_003126218.1 8293572 D 485918 CDS YP_003126219.1 256425566 8362802 complement(8294324..8294992) 1 NC_013132.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: tmz:Tmz1t_2132 metal dependent phosphohydrolase; metal dependent phosphohydrolase 8294992 8362802 Cpin_6614 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003126219.1 8294324 R 485918 CDS YP_003126220.1 256425567 8362803 complement(8295971..8296552) 1 NC_013132.1 TIGRFAM: siroheme synthase; KEGG: aba:Acid345_2374 precorrin-2 dehydrogenase; siroheme synthase 8296552 8362803 Cpin_6615 Chitinophaga pinensis DSM 2588 siroheme synthase YP_003126220.1 8295971 R 485918 CDS YP_003126221.1 256425568 8362804 complement(8296634..8297410) 1 NC_013132.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pmr:PMI2247 siroheme synthase [includes: uroporphyrin-III C-methyltransferase and sirohydrochlorin ferrochelatase]; uroporphyrin-III C-methyltransferase 8297410 8362804 Cpin_6616 Chitinophaga pinensis DSM 2588 uroporphyrin-III C-methyltransferase YP_003126221.1 8296634 R 485918 CDS YP_003126222.1 256425569 8362805 complement(8297444..8299558) 1 NC_013132.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: sus:Acid_6431 nitrite/sulfite reductase hemoprotein beta subunit; sulfite reductase 8299558 8362805 Cpin_6617 Chitinophaga pinensis DSM 2588 sulfite reductase YP_003126222.1 8297444 R 485918 CDS YP_003126223.1 256425570 8362806 8300181..8300834 1 NC_013132.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: shn:Shewana3_0432 2-deoxyglucose-6- phosphatase; HAD-superfamily hydrolase 8300834 8362806 Cpin_6618 Chitinophaga pinensis DSM 2588 HAD-superfamily hydrolase YP_003126223.1 8300181 D 485918 CDS YP_003126224.1 256425571 8362807 complement(8301313..8303205) 1 NC_013132.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: sfu:Sfum_2118 ribosomal protein S1; RNA binding S1 domain-containing protein 8303205 8362807 Cpin_6619 Chitinophaga pinensis DSM 2588 RNA binding S1 domain-containing protein YP_003126224.1 8301313 R 485918 CDS YP_003126225.1 256425572 8362808 8303427..8304305 1 NC_013132.1 PFAM: rhomboid family protein; KEGG: xcv:XCV2901 rhomboid family membrane protein; rhomboid family protein 8304305 8362808 Cpin_6620 Chitinophaga pinensis DSM 2588 rhomboid family protein YP_003126225.1 8303427 D 485918 CDS YP_003126226.1 256425573 8362809 8304352..8305578 1 NC_013132.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 8305578 8362809 Cpin_6621 Chitinophaga pinensis DSM 2588 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_003126226.1 8304352 D 485918 CDS YP_003126227.1 256425574 8362810 8305659..8305799 1 NC_013132.1 hypothetical protein 8305799 8362810 Cpin_6622 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126227.1 8305659 D 485918 CDS YP_003126228.1 256425575 8362811 complement(8305796..8306572) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: sde:Sde_3733 response regulator receiver domain-containing protein; LytTR family two component transcriptional regulator 8306572 8362811 Cpin_6623 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003126228.1 8305796 R 485918 CDS YP_003126229.1 256425576 8362812 complement(8306591..8308543) 1 NC_013132.1 PFAM: histidine kinase internal region; TPR repeat- containing protein; hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein; signal transduction histidine kinase LytS 8308543 8362812 Cpin_6624 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003126229.1 8306591 R 485918 CDS YP_003126230.1 256425577 8362813 8308842..8309000 1 NC_013132.1 hypothetical protein 8309000 8362813 Cpin_6625 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126230.1 8308842 D 485918 CDS YP_003126231.1 256425578 8362814 complement(8308981..8309667) 1 NC_013132.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: bcb:BCB4264_A1552 cytidylate kinase; cytidylate kinase 8309667 8362814 Cpin_6626 Chitinophaga pinensis DSM 2588 cytidylate kinase YP_003126231.1 8308981 R 485918 CDS YP_003126232.1 256425579 8362815 complement(8309741..8311312) 1 NC_013132.1 hypothetical protein 8311312 8362815 Cpin_6627 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126232.1 8309741 R 485918 CDS YP_003126233.1 256425580 8362816 complement(8311356..8314112) 1 NC_013132.1 KEGG: bba:Bd2548 hypothetical protein; hypothetical protein 8314112 8362816 Cpin_6628 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126233.1 8311356 R 485918 CDS YP_003126234.1 256425581 8362817 complement(8314201..8316024) 1 NC_013132.1 KEGG: predicted protein; hypothetical protein 8316024 8362817 Cpin_6629 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126234.1 8314201 R 485918 CDS YP_003126235.1 256425582 8362818 complement(8316861..8319395) 1 NC_013132.1 PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: bsu:BSU00860 class III stress response- related ATPase; ATPase AAA 8319395 8362818 Cpin_6630 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003126235.1 8316861 R 485918 CDS YP_003126236.1 256425583 8362819 8319590..8319964 1 NC_013132.1 KEGG: kpe:KPK_3564 anti-anti-sigma factor; hypothetical protein 8319964 8362819 Cpin_6631 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126236.1 8319590 D 485918 CDS YP_003126237.1 256425584 8362820 8320069..8320977 1 NC_013132.1 PFAM: beta-lactamase domain protein; KEGG: pmr:PMI0252 ribonuclease Z; beta-lactamase domain-containing protein 8320977 8362820 Cpin_6632 Chitinophaga pinensis DSM 2588 beta-lactamase domain-containing protein YP_003126237.1 8320069 D 485918 CDS YP_003126238.1 256425585 8362821 complement(8321057..8321935) 1 NC_013132.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: dihydrodipicolinate synthase; dihydrodipicolinate synthase 8321935 8362821 Cpin_6633 Chitinophaga pinensis DSM 2588 dihydrodipicolinate synthase YP_003126238.1 8321057 R 485918 CDS YP_003126239.1 256425586 8362822 complement(8322037..8322990) 1 NC_013132.1 KEGG: cbc:CbuK_1738 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 8322990 8362822 Cpin_6634 Chitinophaga pinensis DSM 2588 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_003126239.1 8322037 R 485918 CDS YP_003126240.1 256425587 8362824 complement(8323564..8323845) 1 NC_013132.1 hypothetical protein 8323845 8362824 Cpin_6635 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126240.1 8323564 R 485918 CDS YP_003126241.1 256425588 8362825 8323929..8324897 1 NC_013132.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: gbe:GbCGDNIH1_2396 ribonuclease BN; ribonuclease BN 8324897 8362825 Cpin_6636 Chitinophaga pinensis DSM 2588 ribonuclease BN YP_003126241.1 8323929 D 485918 CDS YP_003126242.1 256425589 8362826 complement(8324925..8325914) 1 NC_013132.1 KEGG: xcv:XCV2118 secreted protein; hypothetical protein 8325914 8362826 Cpin_6637 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126242.1 8324925 R 485918 CDS YP_003126243.1 256425590 8362827 complement(8326088..8327200) 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: acyltransferase family protein; acyltransferase 3 8327200 8362827 Cpin_6638 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003126243.1 8326088 R 485918 CDS YP_003126244.1 256425591 8362828 complement(8327282..8329747) 1 NC_013132.1 PFAM: Domain of unknown function DUF1793; KEGG: sus:Acid_2314 glutaminase; hypothetical protein 8329747 8362828 Cpin_6639 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126244.1 8327282 R 485918 CDS YP_003126245.1 256425592 8362829 complement(8329966..8332806) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8332806 8362829 Cpin_6640 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126245.1 8329966 R 485918 CDS YP_003126246.1 256425593 8362830 complement(8332796..8334052) 1 NC_013132.1 hypothetical protein 8334052 8362830 Cpin_6641 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126246.1 8332796 R 485918 CDS YP_003126247.1 256425594 8362831 complement(8334100..8335569) 1 NC_013132.1 PFAM: Alg9 family protein mannosyltransferase; KEGG: zmo:ZMO0849 hypothetical protein; Alg9 family protein mannosyltransferase 8335569 8362831 Cpin_6642 Chitinophaga pinensis DSM 2588 Alg9 family protein mannosyltransferase YP_003126247.1 8334100 R 485918 CDS YP_003126248.1 256425595 8362832 complement(8335581..8335967) 1 NC_013132.1 hypothetical protein 8335967 8362832 Cpin_6643 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126248.1 8335581 R 485918 CDS YP_003126249.1 256425596 8362833 complement(8335967..8336584) 1 NC_013132.1 hypothetical protein 8336584 8362833 Cpin_6644 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126249.1 8335967 R 485918 CDS YP_003126250.1 256425597 8362834 complement(8336577..8337791) 1 NC_013132.1 hypothetical protein 8337791 8362834 Cpin_6645 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126250.1 8336577 R 485918 CDS YP_003126251.1 256425598 8362835 complement(8337894..8338349) 1 NC_013132.1 KEGG: hypothetical protein LOC689787; hypothetical protein 8338349 8362835 Cpin_6646 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126251.1 8337894 R 485918 CDS YP_003126252.1 256425599 8362836 complement(8338424..8339737) 1 NC_013132.1 KEGG: gme:Gmet_0588 hypothetical protein; hypothetical protein 8339737 8362836 Cpin_6647 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126252.1 8338424 R 485918 CDS YP_003126253.1 256425600 8362837 complement(8340171..8340809) 1 NC_013132.1 PFAM: semialdehyde dehydrogenase NAD-binding; KEGG: scl:sce2886 hypothetical protein; semialdehyde dehydrogenase NAD-binding 8340809 8362837 Cpin_6648 Chitinophaga pinensis DSM 2588 semialdehyde dehydrogenase NAD-binding YP_003126253.1 8340171 R 485918 CDS YP_003126254.1 256425601 8362838 complement(8340897..8341484) 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pfl:PFL_0765 quinone family NAD(P)H dehydrogenase; NAD(P)H dehydrogenase (quinone) 8341484 8362838 Cpin_6649 Chitinophaga pinensis DSM 2588 NAD(P)H dehydrogenase (quinone) YP_003126254.1 8340897 R 485918 CDS YP_003126255.1 256425602 8362839 complement(8341560..8342150) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: scl:sce4622 cAMP-binding protein; Crp/Fnr family transcriptional regulator 8342150 8362839 Cpin_6650 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003126255.1 8341560 R 485918 CDS YP_003126256.1 256425603 8362840 8342319..8342786 1 NC_013132.1 hypothetical protein 8342786 8362840 Cpin_6651 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126256.1 8342319 D 485918 CDS YP_003126257.1 256425604 8362841 complement(8343046..8343513) 1 NC_013132.1 hypothetical protein 8343513 8362841 Cpin_6652 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126257.1 8343046 R 485918 CDS YP_003126258.1 256425605 8362842 8343580..8345085 1 NC_013132.1 KEGG: cja:CJA_3707 alkaline phosphatase-like protein; alkaline phosphatase-like protein 8345085 8362842 Cpin_6653 Chitinophaga pinensis DSM 2588 alkaline phosphatase-like protein YP_003126258.1 8343580 D 485918 CDS YP_003126259.1 256425606 8362843 8345319..8346374 1 NC_013132.1 KEGG: bcm:Bcenmc03_4333 heat shock protein DnaJ domain-containing protein; hypothetical protein 8346374 8362843 Cpin_6654 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126259.1 8345319 D 485918 CDS YP_003126260.1 256425607 8362844 8346487..8347623 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: acyltransferase family protein; acyltransferase 3 8347623 8362844 Cpin_6655 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003126260.1 8346487 D 485918 CDS YP_003126261.1 256425608 8362845 complement(8347711..8349057) 1 NC_013132.1 KEGG: kpe:KPK_0007 outer membrane protein, OMP85 family; hypothetical protein 8349057 8362845 Cpin_6656 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126261.1 8347711 R 485918 CDS YP_003126262.1 256425609 8362846 complement(8349327..8349896) 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: bph:Bphy_2031 hypothetical protein; hypothetical protein 8349896 8362846 Cpin_6657 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126262.1 8349327 R 485918 CDS YP_003126263.1 256425610 8362847 complement(8350005..8351855) 1 NC_013132.1 PFAM: metallophosphoesterase; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: sus:Acid_4533 pyrrolo-quinoline quinone; metallophosphoesterase 8351855 8362847 Cpin_6658 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003126263.1 8350005 R 485918 CDS YP_003126264.1 256425611 8362848 complement(8351869..8353599) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8353599 8362848 Cpin_6659 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126264.1 8351869 R 485918 CDS YP_003126265.1 256425612 8362849 complement(8353629..8356856) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8356856 8362849 Cpin_6660 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126265.1 8353629 R 485918 CDS YP_003126266.1 256425613 8362850 complement(8356938..8357957) 1 NC_013132.1 PFAM: FecR protein; KEGG: cak:Caul_0142 anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 8357957 8362850 Cpin_6661 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126266.1 8356938 R 485918 CDS YP_003126267.1 256425614 8362851 complement(8358042..8358569) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pmr:PMI3708 ECF-family sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 8358569 8362851 Cpin_6662 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126267.1 8358042 R 485918 CDS YP_003126268.1 256425615 8362853 complement(8359140..8360672) 1 NC_013132.1 PFAM: protein of unknown function DUF1703; KEGG: lch:Lcho_2330 hypothetical protein; hypothetical protein 8360672 8362853 Cpin_6663 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126268.1 8359140 R 485918 CDS YP_003126269.1 256425616 8362854 8360854..8361876 1 NC_013132.1 PFAM: Luciferase-like monooxygenase; KEGG: mlo:mll2315 alkanal monooxygenase-like protein; luciferase-like monooxygenase 8361876 8362854 Cpin_6664 Chitinophaga pinensis DSM 2588 luciferase-like monooxygenase YP_003126269.1 8360854 D 485918 CDS YP_003126270.1 256425617 8362855 8362518..8363669 1 NC_013132.1 KEGG: GA16882 gene product from transcript GA16882- RA; hypothetical protein 8363669 8362855 Cpin_6665 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126270.1 8362518 D 485918 CDS YP_003126271.1 256425618 8362856 8363608..8364441 1 NC_013132.1 hypothetical protein 8364441 8362856 Cpin_6666 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126271.1 8363608 D 485918 CDS YP_003126272.1 256425619 8362857 complement(8364503..8365531) 1 NC_013132.1 hypothetical protein 8365531 8362857 Cpin_6667 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126272.1 8364503 R 485918 CDS YP_003126273.1 256425620 8362858 complement(8365676..8365993) 1 NC_013132.1 hypothetical protein 8365993 8362858 Cpin_6668 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126273.1 8365676 R 485918 CDS YP_003126274.1 256425621 8362859 complement(8366092..8366541) 1 NC_013132.1 hypothetical protein 8366541 8362859 Cpin_6669 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126274.1 8366092 R 485918 CDS YP_003126275.1 256425622 8362860 complement(8366715..8367311) 1 NC_013132.1 hypothetical protein 8367311 8362860 Cpin_6670 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126275.1 8366715 R 485918 CDS YP_003126276.1 256425623 8362862 complement(8368005..8368292) 1 NC_013132.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: gur:Gura_3580 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 8368292 8362862 Cpin_6672 Chitinophaga pinensis DSM 2588 antibiotic biosynthesis monooxygenase YP_003126276.1 8368005 R 485918 CDS YP_003126277.1 256425624 8362863 8368708..8368938 1 NC_013132.1 hypothetical protein 8368938 8362863 Cpin_6673 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126277.1 8368708 D 485918 CDS YP_003126278.1 256425625 8362865 8369378..8370226 1 NC_013132.1 PFAM: lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein 8370226 8362865 Cpin_6674 Chitinophaga pinensis DSM 2588 G-D-S-L family lipolytic protein YP_003126278.1 8369378 D 485918 CDS YP_003126279.1 256425626 8362866 complement(8370415..8371248) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8371248 8362866 Cpin_6675 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126279.1 8370415 R 485918 CDS YP_003126280.1 256425627 8362867 complement(8371754..8372515) 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region; LytTR family two component transcriptional regulator 8372515 8362867 Cpin_6676 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003126280.1 8371754 R 485918 CDS YP_003126281.1 256425628 8362868 complement(8372490..8373524) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 8373524 8362868 Cpin_6677 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003126281.1 8372490 R 485918 CDS YP_003126282.1 256425629 8362869 complement(8373833..8374987) 1 NC_013132.1 PFAM: epoxide hydrolase domain protein; alpha/beta hydrolase; KEGG: acp:A2cp1_1654 epoxide hydrolase domain protein; microsomal epoxide hydrolase 8374987 8362869 Cpin_6678 Chitinophaga pinensis DSM 2588 microsomal epoxide hydrolase YP_003126282.1 8373833 R 485918 CDS YP_003126283.1 256425630 8362870 complement(8375121..8375516) 1 NC_013132.1 hypothetical protein 8375516 8362870 Cpin_6679 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126283.1 8375121 R 485918 CDS YP_003126284.1 256425631 8362871 complement(8375527..8376303) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pst:PSPTO_1582 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 8376303 8362871 Cpin_6680 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126284.1 8375527 R 485918 CDS YP_003126285.1 256425632 8362872 8376572..8377252 1 NC_013132.1 hypothetical protein 8377252 8362872 Cpin_6681 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126285.1 8376572 D 485918 CDS YP_003126286.1 256425633 8362873 8378311..8381568 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8381568 8362873 Cpin_6682 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126286.1 8378311 D 485918 CDS YP_003126287.1 256425634 8362874 8381587..8383059 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8383059 8362874 Cpin_6683 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126287.1 8381587 D 485918 CDS YP_003126288.1 256425635 8362875 8383078..8383767 1 NC_013132.1 hypothetical protein 8383767 8362875 Cpin_6684 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126288.1 8383078 D 485918 CDS YP_003126289.1 256425636 8362876 8383790..8384761 1 NC_013132.1 hypothetical protein 8384761 8362876 Cpin_6685 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126289.1 8383790 D 485918 CDS YP_003126290.1 256425637 8362877 complement(8384888..8385184) 1 NC_013132.1 hypothetical protein 8385184 8362877 Cpin_6686 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126290.1 8384888 R 485918 CDS YP_003126291.1 256425638 8362878 8385478..8387493 1 NC_013132.1 PFAM: peptidase M13; peptidase M13 neprilysin; KEGG: saz:Sama_2615 endothelin-converting protein 1; neprilysin 8387493 8362878 Cpin_6687 Chitinophaga pinensis DSM 2588 neprilysin YP_003126291.1 8385478 D 485918 CDS YP_003126292.1 256425639 8362879 8387567..8388325 1 NC_013132.1 hypothetical protein 8388325 8362879 Cpin_6688 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126292.1 8387567 D 485918 CDS YP_003126293.1 256425640 8362880 complement(8388487..8388966) 1 NC_013132.1 hypothetical protein 8388966 8362880 Cpin_6689 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126293.1 8388487 R 485918 CDS YP_003126294.1 256425641 8362881 complement(8389016..8389231) 1 NC_013132.1 hypothetical protein 8389231 8362881 Cpin_6690 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126294.1 8389016 R 485918 CDS YP_003126295.1 256425642 8362882 complement(8389228..8389758) 1 NC_013132.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: bsu:BSU40760 hypothetical protein; bifunctional deaminase-reductase domain-containing protein 8389758 8362882 Cpin_6691 Chitinophaga pinensis DSM 2588 bifunctional deaminase-reductase domain-containing protein YP_003126295.1 8389228 R 485918 CDS YP_003126296.1 256425643 8362883 complement(8389822..8390604) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mxa:MXAN_5274 hypothetical protein; AraC family transcriptional regulator 8390604 8362883 Cpin_6692 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126296.1 8389822 R 485918 CDS YP_003126297.1 256425644 8362884 complement(8390676..8391884) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; KEGG: oca:OCAR_7763 major facilitator superfamily MFS_1; major facilitator superfamily protein 8391884 8362884 Cpin_6693 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003126297.1 8390676 R 485918 CDS YP_003126298.1 256425645 8362885 complement(8392022..8392534) 1 NC_013132.1 KEGG: pin:Ping_3645 GCN5-related N- acetyltransferase; hypothetical protein 8392534 8362885 Cpin_6694 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126298.1 8392022 R 485918 CDS YP_003126299.1 256425646 8362886 complement(8392622..8394007) 1 NC_013132.1 PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mmw:Mmwyl1_3949 GntR family transcriptional regulator; GntR family transcriptional regulator 8394007 8362886 Cpin_6695 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003126299.1 8392622 R 485918 CDS YP_003126300.1 256425647 8362888 complement(8394391..8395185) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ilo:IL0083 short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 8395185 8362888 Cpin_6697 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126300.1 8394391 R 485918 CDS YP_003126301.1 256425648 8362889 complement(8395241..8395822) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: bja:blr8185 transcriptional regulatory protein; TetR family transcriptional regulator 8395822 8362889 Cpin_6698 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003126301.1 8395241 R 485918 CDS YP_003126302.1 256425649 8362890 complement(8395861..8396772) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 8396772 8362890 Cpin_6699 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126302.1 8395861 R 485918 CDS YP_003126303.1 256425650 8362891 complement(8396801..8397820) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: afw:Anae109_2886 aldo/keto reductase; aldo/keto reductase 8397820 8362891 Cpin_6700 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003126303.1 8396801 R 485918 CDS YP_003126304.1 256425651 8362892 8398018..8398833 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short chain dehydrogenase (predicted); short-chain dehydrogenase/reductase SDR 8398833 8362892 Cpin_6701 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126304.1 8398018 D 485918 CDS YP_003126305.1 256425652 8362893 8398944..8399855 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6224 AraC family transcriptional regulator; AraC family transcriptional regulator 8399855 8362893 Cpin_6702 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126305.1 8398944 D 485918 CDS YP_003126306.1 256425653 8362894 8399974..8400375 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: ppd:Ppro_1109 HxlR family transcriptional regulator; HxlR family transcriptional regulator 8400375 8362894 Cpin_6703 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003126306.1 8399974 D 485918 CDS YP_003126307.1 256425654 8362895 8400442..8401080 1 NC_013132.1 KEGG: bca:BCE_1051 hypothetical protein; hypothetical protein 8401080 8362895 Cpin_6704 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126307.1 8400442 D 485918 CDS YP_003126308.1 256425655 8362896 complement(8401088..8402095) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bja:blr6271 hypothetical protein; alpha/beta hydrolase 8402095 8362896 Cpin_6705 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003126308.1 8401088 R 485918 CDS YP_003126309.1 256425656 8362898 8403023..8403415 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: abb:ABBFA_000744 HxlR-like helix-turn-helix family protein; HxlR family transcriptional regulator 8403415 8362898 Cpin_6707 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003126309.1 8403023 D 485918 CDS YP_003126310.1 256425657 8362899 8403425..8404024 1 NC_013132.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: dal:Dalk_0690 Appr-1-p processing domain protein; Appr-1-p processing protein 8404024 8362899 Cpin_6708 Chitinophaga pinensis DSM 2588 Appr-1-p processing protein YP_003126310.1 8403425 D 485918 CDS YP_003126311.1 256425658 8362900 complement(8404034..8404444) 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mms:mma_2903 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein; bleomycin resistance protein 8404444 8362900 Cpin_6709 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003126311.1 8404034 R 485918 CDS YP_003126312.1 256425659 8362901 complement(8404582..8405151) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 8405151 8362901 Cpin_6710 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003126312.1 8404582 R 485918 CDS YP_003126313.1 256425660 8362902 complement(8405177..8405797) 1 NC_013132.1 KEGG: scl:sce8374 hypothetical protein; hypothetical protein 8405797 8362902 Cpin_6711 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126313.1 8405177 R 485918 CDS YP_003126314.1 256425661 8362903 8405906..8406490 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: vha:VIBHAR_00763 hypothetical protein; Crp/Fnr family transcriptional regulator 8406490 8362903 Cpin_6712 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003126314.1 8405906 D 485918 CDS YP_003126315.1 256425662 8362904 8406556..8407521 1 NC_013132.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: zinc-containing alcohol dehydrogenase (ADH); alcohol dehydrogenase zinc-binding domain-containing protein 8407521 8362904 Cpin_6713 Chitinophaga pinensis DSM 2588 alcohol dehydrogenase zinc-binding domain-containing protein YP_003126315.1 8406556 D 485918 CDS YP_003126316.1 256425663 8362905 8407849..8408574 1 NC_013132.1 hypothetical protein 8408574 8362905 Cpin_6714 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126316.1 8407849 D 485918 CDS YP_003126317.1 256425664 8362906 complement(8408650..8409186) 1 NC_013132.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: xcv:XCV1741 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 8409186 8362906 Cpin_6715 Chitinophaga pinensis DSM 2588 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_003126317.1 8408650 R 485918 CDS YP_003126318.1 256425665 8362907 8409315..8410058 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bsu:BSU38540 involved in lipoteichoic acid biosynthesis; short-chain dehydrogenase/reductase SDR 8410058 8362907 Cpin_6716 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126318.1 8409315 D 485918 CDS YP_003126319.1 256425666 8362908 8410156..8411016 1 NC_013132.1 KEGG: rme:Rmet_1925 hypothetical protein; hypothetical protein 8411016 8362908 Cpin_6717 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126319.1 8410156 D 485918 CDS YP_003126320.1 256425667 8362909 8411182..8413599 1 NC_013132.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE0546 TonB-dependent receptor protein; TonB-dependent siderophore receptor 8413599 8362909 Cpin_6718 Chitinophaga pinensis DSM 2588 TonB-dependent siderophore receptor YP_003126320.1 8411182 D 485918 CDS YP_003126321.1 256425668 8362910 8413871..8414953 1 NC_013132.1 KEGG: ccs:CCNA_03020 hypothetical protein; hypothetical protein 8414953 8362910 Cpin_6719 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126321.1 8413871 D 485918 CDS YP_003126322.1 256425669 8362911 8415076..8415501 1 NC_013132.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rme:Rmet_5065 hypothetical protein; activator of Hsp90 ATPase 1 family protein 8415501 8362911 Cpin_6720 Chitinophaga pinensis DSM 2588 activator of Hsp90 ATPase 1 family protein YP_003126322.1 8415076 D 485918 CDS YP_003126323.1 256425670 8362912 complement(8415600..8416361) 1 NC_013132.1 KEGG: hch:HCH_00727 hypothetical protein; hypothetical protein 8416361 8362912 Cpin_6721 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126323.1 8415600 R 485918 CDS YP_003126324.1 256425671 8362913 complement(8416437..8416994) 1 NC_013132.1 hypothetical protein 8416994 8362913 Cpin_6722 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126324.1 8416437 R 485918 CDS YP_003126325.1 256425672 8362914 complement(8417069..8417626) 1 NC_013132.1 PFAM: HPP family protein; KEGG: mgm:Mmc1_0464 HPP family protein+B94; HPP family protein 8417626 8362914 Cpin_6723 Chitinophaga pinensis DSM 2588 HPP family protein YP_003126325.1 8417069 R 485918 CDS YP_003126326.1 256425673 8362915 complement(8417800..8418633) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: bcb:BCB4264_A0222 oxidoreductase, aldo/keto reductase family; 2,5-didehydrogluconate reductase 8418633 8362915 Cpin_6724 Chitinophaga pinensis DSM 2588 2,5-didehydrogluconate reductase YP_003126326.1 8417800 R 485918 CDS YP_003126327.1 256425674 8362916 complement(8418725..8419627) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aby:ABAYE0223 transcriptional regulator (AraC-like); AraC family transcriptional regulator 8419627 8362916 Cpin_6725 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126327.1 8418725 R 485918 CDS YP_003126328.1 256425675 8362917 complement(8419692..8421017) 1 NC_013132.1 KEGG: nmu:Nmul_A0927 phosphoesterase, PA- phosphatase related; hypothetical protein 8421017 8362917 Cpin_6726 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126328.1 8419692 R 485918 CDS YP_003126329.1 256425676 8362918 complement(8421021..8424350) 1 NC_013132.1 PFAM: ASPIC/UnbV domain protein; KEGG: sus:Acid_1964 ASPIC/UnbV domain-containing protein; ASPIC/UnbV domain-containing protein 8424350 8362918 Cpin_6727 Chitinophaga pinensis DSM 2588 ASPIC/UnbV domain-containing protein YP_003126329.1 8421021 R 485918 CDS YP_003126330.1 256425677 8362919 complement(8424438..8426027) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8426027 8362919 Cpin_6728 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126330.1 8424438 R 485918 CDS YP_003126331.1 256425678 8362920 complement(8426033..8429143) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8429143 8362920 Cpin_6729 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126331.1 8426033 R 485918 CDS YP_003126332.1 256425679 8362921 complement(8430021..8430992) 1 NC_013132.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein; glycoside hydrolase 8430992 8362921 Cpin_6730 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003126332.1 8430021 R 485918 CDS YP_003126333.1 256425680 8362922 8431269..8431865 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: mxa:MXAN_3686 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 8431865 8362922 Cpin_6731 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126333.1 8431269 D 485918 CDS YP_003126334.1 256425681 8362923 8432021..8433205 1 NC_013132.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR; anti-FecI sigma factor FecR 8433205 8362923 Cpin_6732 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126334.1 8432021 D 485918 CDS YP_003126335.1 256425682 8362924 8433470..8436766 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 8436766 8362924 Cpin_6733 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126335.1 8433470 D 485918 CDS YP_003126336.1 256425683 8362925 8436794..8438425 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8438425 8362925 Cpin_6734 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126336.1 8436794 D 485918 CDS YP_003126337.1 256425684 8362926 complement(8438589..8440046) 1 NC_013132.1 PFAM: glycoside hydrolase family 30; KEGG: cja:CJA_3306 glycoside hydrolase family 30, gly30A; glycoside hydrolase 8440046 8362926 Cpin_6735 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003126337.1 8438589 R 485918 CDS YP_003126338.1 256425685 8362927 complement(8440069..8441526) 1 NC_013132.1 PFAM: glycoside hydrolase family 30; KEGG: sus:Acid_2638 glucosylceramidase; glycoside hydrolase 8441526 8362927 Cpin_6736 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003126338.1 8440069 R 485918 CDS YP_003126339.1 256425686 8362928 complement(8441523..8442383) 1 NC_013132.1 PFAM: glycoside hydrolase family 16; KEGG: swd:Swoo_4377 glycoside hydrolase family protein; glycoside hydrolase 8442383 8362928 Cpin_6737 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003126339.1 8441523 R 485918 CDS YP_003126340.1 256425687 8362929 complement(8442561..8443418) 1 NC_013132.1 KEGG: sde:Sde_2996 endoglucanase-like; hypothetical protein 8443418 8362929 Cpin_6738 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126340.1 8442561 R 485918 CDS YP_003126341.1 256425688 8362930 complement(8443463..8445004) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8445004 8362930 Cpin_6739 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126341.1 8443463 R 485918 CDS YP_003126342.1 256425689 8362931 complement(8445026..8448376) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8448376 8362931 Cpin_6740 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126342.1 8445026 R 485918 CDS YP_003126343.1 256425690 8362932 complement(8448668..8449858) 1 NC_013132.1 PFAM: FecR protein; KEGG: nwi:Nwi_1339 FecR protein; anti-FecI sigma factor FecR 8449858 8362932 Cpin_6741 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126343.1 8448668 R 485918 CDS YP_003126344.1 256425691 8362933 complement(8449942..8450532) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: bja:blr3042 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 8450532 8362933 Cpin_6742 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126344.1 8449942 R 485918 CDS YP_003126345.1 256425692 8362935 complement(8451239..8451709) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: bpy:Bphyt_5760 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 8451709 8362935 Cpin_6743 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003126345.1 8451239 R 485918 CDS YP_003126346.1 256425693 8362936 8451887..8452609 1 NC_013132.1 KEGG: azc:AZC_1385 hypothetical protein; hypothetical protein 8452609 8362936 Cpin_6744 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126346.1 8451887 D 485918 CDS YP_003126347.1 256425694 8362937 complement(8452909..8453655) 1 NC_013132.1 hypothetical protein 8453655 8362937 Cpin_6745 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126347.1 8452909 R 485918 CDS YP_003126348.1 256425695 8362938 complement(8454362..8455651) 1 NC_013132.1 KEGG: competence protein ComEC; hypothetical protein 8455651 8362938 Cpin_6746 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126348.1 8454362 R 485918 CDS YP_003126349.1 256425696 8362939 8455824..8456945 1 NC_013132.1 hypothetical protein 8456945 8362939 Cpin_6747 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126349.1 8455824 D 485918 CDS YP_003126350.1 256425697 8362940 8457231..8458511 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: mmr:Mmar10_3032 major facilitator transporter; major facilitator superfamily protein 8458511 8362940 Cpin_6748 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003126350.1 8457231 D 485918 CDS YP_003126351.1 256425698 8362941 complement(8458675..8458878) 1 NC_013132.1 hypothetical protein 8458878 8362941 Cpin_6749 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126351.1 8458675 R 485918 CDS YP_003126352.1 256425699 8362942 8458977..8459960 1 NC_013132.1 KEGG: sdn:Sden_1931 helix-turn-helix, AraC type; AraC family transcriptional regulator 8459960 8362942 Cpin_6750 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126352.1 8458977 D 485918 CDS YP_003126353.1 256425700 8362943 8460027..8460491 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: csa:Csal_2376 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 8460491 8362943 Cpin_6751 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003126353.1 8460027 D 485918 CDS YP_003126354.1 256425701 8362944 8460620..8462269 1 NC_013132.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: bba:Bd3766 hypothetical protein; hypothetical protein 8462269 8362944 Cpin_6752 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126354.1 8460620 D 485918 CDS YP_003126355.1 256425702 8362945 8462369..8464999 1 NC_013132.1 KEGG: amc:MADE_00921 BNR/Asp-box repeat protein; hypothetical protein 8464999 8362945 Cpin_6753 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126355.1 8462369 D 485918 CDS YP_003126356.1 256425703 8362946 complement(8465470..8465877) 1 NC_013132.1 KEGG: bja:bll7858 hypothetical protein; hypothetical protein 8465877 8362946 Cpin_6754 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126356.1 8465470 R 485918 CDS YP_003126357.1 256425704 8362947 complement(8466007..8467008) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: ret:RHE_PB00074 aldoketo reductase protein; aldo/keto reductase 8467008 8362947 Cpin_6755 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003126357.1 8466007 R 485918 CDS YP_003126358.1 256425705 8362948 complement(8467020..8467619) 1 NC_013132.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ppu:PP_4661 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 8467619 8362948 Cpin_6756 Chitinophaga pinensis DSM 2588 NAD(P)H dehydrogenase (quinone) YP_003126358.1 8467020 R 485918 CDS YP_003126359.1 256425706 8362949 8467722..8468624 1 NC_013132.1 PFAM: regulatory protein LysR; KEGG: amc:MADE_01219 LysR-family transcriptional regulator; LysR family transcriptional regulator 8468624 8362949 Cpin_6757 Chitinophaga pinensis DSM 2588 LysR family transcriptional regulator YP_003126359.1 8467722 D 485918 CDS YP_003126360.1 256425707 8362950 complement(8468676..8470019) 1 NC_013132.1 hypothetical protein 8470019 8362950 Cpin_6758 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126360.1 8468676 R 485918 CDS YP_003126361.1 256425708 8362951 complement(8470036..8471025) 1 NC_013132.1 PFAM: FecR protein; KEGG: pfl:PFL_4040 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 8471025 8362951 Cpin_6759 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126361.1 8470036 R 485918 CDS YP_003126362.1 256425709 8362952 complement(8471035..8471586) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: ppg:PputGB1_0180 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 8471586 8362952 Cpin_6760 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126362.1 8471035 R 485918 CDS YP_003126363.1 256425710 8362953 8471759..8472244 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0497 acetyltransferase; N-acetyltransferase GCN5 8472244 8362953 Cpin_6761 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003126363.1 8471759 D 485918 CDS YP_003126364.1 256425711 8362954 8472680..8473543 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1794 hypothetical protein; AraC family transcriptional regulator 8473543 8362954 Cpin_6762 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126364.1 8472680 D 485918 CDS YP_003126365.1 256425712 8362955 8473610..8474260 1 NC_013132.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bph:Bphy_4196 metal dependent phosphohydrolase; metal dependent phosphohydrolase 8474260 8362955 Cpin_6763 Chitinophaga pinensis DSM 2588 metal dependent phosphohydrolase YP_003126365.1 8473610 D 485918 CDS YP_003126366.1 256425713 8362956 complement(8474406..8474720) 1 NC_013132.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hch:HCH_03203 transcriptional regulator; ArsR family transcriptional regulator 8474720 8362956 Cpin_6764 Chitinophaga pinensis DSM 2588 ArsR family transcriptional regulator YP_003126366.1 8474406 R 485918 CDS YP_003126367.1 256425714 8362957 8474856..8476268 1 NC_013132.1 PFAM: [2Fe-2S]-binding domain protein; molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; ferredoxin; KEGG: psb:Psyr_1815 ferredoxin:molybdopterin dehydrogenase, FAD-binding:[2Fe-2S]-binding:CO dehydrogenase flavoprotein, C-terminal; (2Fe-2S)-binding domain-containing protein 8476268 8362957 Cpin_6765 Chitinophaga pinensis DSM 2588 (2Fe-2S)-binding domain-containing protein YP_003126367.1 8474856 D 485918 CDS YP_003126368.1 256425715 8362958 8476275..8478584 1 NC_013132.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: spe:Spro_2301 xanthine dehydrogenase molybdopterin binding subunit; xanthine dehydrogenase 8478584 8362958 Cpin_6766 Chitinophaga pinensis DSM 2588 xanthine dehydrogenase YP_003126368.1 8476275 D 485918 CDS YP_003126369.1 256425716 8362959 8478547..8479566 1 NC_013132.1 KEGG: dde:Dde_3546 xanthine dehydrogenase accessory factor; xanthine and CO dehydrogenase maturation factor XdhC/CoxF family-like protein 8479566 8362959 Cpin_6767 Chitinophaga pinensis DSM 2588 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family-like protein YP_003126369.1 8478547 D 485918 CDS YP_003126370.1 256425717 8362960 complement(8479511..8480356) 1 NC_013132.1 KEGG: scl:sce4023 uricase; TIGRFAM: urate oxidase; PFAM: Uricase; urate oxidase 8480356 8362960 Cpin_6768 Chitinophaga pinensis DSM 2588 urate oxidase YP_003126370.1 8479511 R 485918 CDS YP_003126371.1 256425718 8362961 8480435..8481781 1 NC_013132.1 TIGRFAM: allantoinase; PFAM: amidohydrolase; amidohydrolase; KEGG: scl:sce5876 allantoinase; allantoinase 8481781 8362961 Cpin_6769 Chitinophaga pinensis DSM 2588 allantoinase YP_003126371.1 8480435 D 485918 CDS YP_003126372.1 256425719 8362962 8481797..8483047 1 NC_013132.1 KEGG: bja:bll6147 allantoate amidohydrolase; TIGRFAM: amidase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 8483047 8362962 Cpin_6770 Chitinophaga pinensis DSM 2588 amidase YP_003126372.1 8481797 D 485918 CDS YP_003126373.1 256425720 8362963 8483049..8483795 1 NC_013132.1 PFAM: cupin; KEGG: hch:HCH_01149 hypothetical protein; hypothetical protein 8483795 8362963 Cpin_6771 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126373.1 8483049 D 485918 CDS YP_003126374.1 256425721 8362964 8483809..8484315 1 NC_013132.1 TIGRFAM: OHCU decarboxylase; KEGG: hch:HCH_01094 OHCU decarboxylase; OHCU decarboxylase 8484315 8362964 Cpin_6772 Chitinophaga pinensis DSM 2588 OHCU decarboxylase YP_003126374.1 8483809 D 485918 CDS YP_003126375.1 256425722 8362965 8484312..8484650 1 NC_013132.1 KEGG: cps:CPS_4870 hypothetical protein; TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin; SMART: transthyretin; hydroxyisourate hydrolase 8484650 8362965 Cpin_6773 Chitinophaga pinensis DSM 2588 hydroxyisourate hydrolase YP_003126375.1 8484312 D 485918 CDS YP_003126376.1 256425723 8362966 8484665..8486098 1 NC_013132.1 KEGG: mxa:MXAN_6823 hypothetical protein; hypothetical protein 8486098 8362966 Cpin_6774 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126376.1 8484665 D 485918 CDS YP_003126377.1 256425724 8362967 8486154..8486351 1 NC_013132.1 KEGG: ATPase; ATPase 8486351 8362967 Cpin_6775 Chitinophaga pinensis DSM 2588 ATPase YP_003126377.1 8486154 D 485918 CDS YP_003126378.1 256425725 8362968 complement(8486352..8487173) 1 NC_013132.1 KEGG: aba:Acid345_2907 40-residue YVTN beta- propeller repeat protein; hypothetical protein 8487173 8362968 Cpin_6776 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126378.1 8486352 R 485918 CDS YP_003126379.1 256425726 8362969 8487260..8488600 1 NC_013132.1 PFAM: beta-lactamase; KEGG: sus:Acid_2490 beta-lactamase; beta-lactamase 8488600 8362969 Cpin_6777 Chitinophaga pinensis DSM 2588 beta-lactamase YP_003126379.1 8487260 D 485918 CDS YP_003126380.1 256425727 8362970 8488739..8489719 1 NC_013132.1 KEGG: spc:Sputcn32_3591 outer membrane adhesin like protein; hypothetical protein 8489719 8362970 Cpin_6778 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126380.1 8488739 D 485918 CDS YP_003126381.1 256425728 8362971 complement(8489870..8490853) 1 NC_013132.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: similar to CG1236-PA; glyoxylate reductase 8490853 8362971 Cpin_6779 Chitinophaga pinensis DSM 2588 glyoxylate reductase YP_003126381.1 8489870 R 485918 CDS YP_003126382.1 256425729 8362972 8491382..8492086 1 NC_013132.1 hypothetical protein 8492086 8362972 Cpin_6780 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126382.1 8491382 D 485918 CDS YP_003126383.1 256425730 8362973 8492104..8493147 1 NC_013132.1 PFAM: peptidase S41; SMART: peptidase S41; KEGG: mmr:Mmar10_0061 peptidase S41; peptidase S41 8493147 8362973 Cpin_6781 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003126383.1 8492104 D 485918 CDS YP_003126384.1 256425731 8362974 complement(8493256..8493798) 1 NC_013132.1 PFAM: PEBP family protein; KEGG: rpa:RPA0709 hypothetical protein; PEBP family protein 8493798 8362974 Cpin_6782 Chitinophaga pinensis DSM 2588 PEBP family protein YP_003126384.1 8493256 R 485918 CDS YP_003126385.1 256425732 8362975 complement(8493877..8494758) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: conserved hypothetical protein, transcriptional regulator (AraC family); AraC family transcriptional regulator 8494758 8362975 Cpin_6783 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126385.1 8493877 R 485918 CDS YP_003126386.1 256425733 8362976 complement(8494873..8495589) 1 NC_013132.1 KEGG: abu:Abu_1617 hypothetical protein; hypothetical protein 8495589 8362976 Cpin_6784 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126386.1 8494873 R 485918 CDS YP_003126387.1 256425734 8362977 8495715..8496386 1 NC_013132.1 KEGG: pen:PSEEN5228 hypothetical protein; hypothetical protein 8496386 8362977 Cpin_6785 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126387.1 8495715 D 485918 CDS YP_003126388.1 256425735 8362978 8496507..8498630 1 NC_013132.1 KEGG: rme:Rmet_1657 conserved hypothetical protein- transmembrane prediction; hypothetical protein 8498630 8362978 Cpin_6786 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126388.1 8496507 D 485918 CDS YP_003126389.1 256425736 8362979 complement(8498746..8499588) 1 NC_013132.1 PFAM: rhomboid family protein; KEGG: hne:HNE_0332 S54 family peptidase; rhomboid family protein 8499588 8362979 Cpin_6787 Chitinophaga pinensis DSM 2588 rhomboid family protein YP_003126389.1 8498746 R 485918 CDS YP_003126390.1 256425737 8362980 8499735..8500268 1 NC_013132.1 KEGG: ban:BA2721 hypothetical protein; hypothetical protein 8500268 8362980 Cpin_6788 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126390.1 8499735 D 485918 CDS YP_003126391.1 256425738 8362981 complement(8500242..8501489) 1 NC_013132.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: hch:HCH_03222 hemopexin repeat-containing protein; type I phosphodiesterase/nucleotide pyrophosphatase 8501489 8362981 Cpin_6789 Chitinophaga pinensis DSM 2588 type I phosphodiesterase/nucleotide pyrophosphatase YP_003126391.1 8500242 R 485918 CDS YP_003126392.1 256425739 8362982 complement(8501516..8502979) 1 NC_013132.1 hypothetical protein 8502979 8362982 Cpin_6790 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126392.1 8501516 R 485918 CDS YP_003126393.1 256425740 8362983 complement(8502979..8506395) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor plug 8506395 8362983 Cpin_6791 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126393.1 8502979 R 485918 CDS YP_003126394.1 256425741 8362984 complement(8506408..8507415) 1 NC_013132.1 PFAM: FecR protein; KEGG: net:Neut_2091 FecR; anti-FecI sigma factor FecR 8507415 8362984 Cpin_6792 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126394.1 8506408 R 485918 CDS YP_003126395.1 256425742 8362985 complement(8507480..8508043) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: saz:Sama_2611 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 8508043 8362985 Cpin_6793 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126395.1 8507480 R 485918 CDS YP_003126396.1 256425743 8362986 complement(8508478..8508915) 1 NC_013132.1 KEGG: pmu:PM1083 hypothetical protein; hypothetical protein 8508915 8362986 Cpin_6794 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126396.1 8508478 R 485918 CDS YP_003126397.1 256425744 8362987 complement(8509158..8510078) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: maq:Maqu_2134 AraC protein, arabinose- binding/dimerisation; AraC family transcriptional regulator 8510078 8362987 Cpin_6795 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126397.1 8509158 R 485918 CDS YP_003126398.1 256425745 8362988 8510268..8513513 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 8513513 8362988 Cpin_6796 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126398.1 8510268 D 485918 CDS YP_003126399.1 256425746 8362989 8513524..8515440 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8515440 8362989 Cpin_6797 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126399.1 8513524 D 485918 CDS YP_003126400.1 256425747 8362990 8515489..8516736 1 NC_013132.1 hypothetical protein 8516736 8362990 Cpin_6798 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126400.1 8515489 D 485918 CDS YP_003126401.1 256425748 8362991 8516755..8517975 1 NC_013132.1 PFAM: fibronectin type III domain protein; SMART: fibronectin type III domain protein; fibronectin type III domain-containing protein 8517975 8362991 Cpin_6799 Chitinophaga pinensis DSM 2588 fibronectin type III domain-containing protein YP_003126401.1 8516755 D 485918 CDS YP_003126402.1 256425749 8362992 8517989..8520325 1 NC_013132.1 KEGG: cja:CJA_3593 alpha-L-fucosidase, , afc95B; alpha-L-fucosidase 8520325 8362992 Cpin_6800 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003126402.1 8517989 D 485918 CDS YP_003126403.1 256425750 8362993 8520352..8521143 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pzu:PHZ_c2816 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 8521143 8362993 Cpin_6801 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126403.1 8520352 D 485918 CDS YP_003126404.1 256425751 8362994 complement(8521353..8522258) 1 NC_013132.1 KEGG: sew:SeSA_A1319 bacteriophage protein; hypothetical protein 8522258 8362994 Cpin_6802 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126404.1 8521353 R 485918 CDS YP_003126405.1 256425752 8362995 complement(8522647..8522967) 1 NC_013132.1 hypothetical protein 8522967 8362995 Cpin_6803 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126405.1 8522647 R 485918 CDS YP_003126406.1 256425753 8362996 complement(8523069..8523497) 1 NC_013132.1 KEGG: aba:Acid345_2503 hypothetical protein; hypothetical protein 8523497 8362996 Cpin_6804 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126406.1 8523069 R 485918 CDS YP_003126407.1 256425754 8362997 complement(8523567..8524583) 1 NC_013132.1 hypothetical protein 8524583 8362997 Cpin_6805 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126407.1 8523567 R 485918 CDS YP_003126408.1 256425755 8362998 complement(8524585..8525943) 1 NC_013132.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rle:pRL100274 fucosidase; alpha-L-fucosidase 8525943 8362998 Cpin_6806 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003126408.1 8524585 R 485918 CDS YP_003126409.1 256425756 8362999 complement(8526132..8527421) 1 NC_013132.1 hypothetical protein 8527421 8362999 Cpin_6807 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126409.1 8526132 R 485918 CDS YP_003126410.1 256425757 8363000 complement(8527441..8530563) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8530563 8363000 Cpin_6808 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126410.1 8527441 R 485918 CDS YP_003126411.1 256425758 8363001 complement(8530731..8531477) 1 NC_013132.1 PFAM: regulatory protein DeoR; hypothetical protein; SMART: regulatory protein DeoR; KEGG: esa:ESA_02953 hypothetical protein; DeoR family transcriptional regulator 8531477 8363001 Cpin_6809 Chitinophaga pinensis DSM 2588 DeoR family transcriptional regulator YP_003126411.1 8530731 R 485918 CDS YP_003126412.1 256425759 8363002 complement(8531595..8532788) 1 NC_013132.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 8532788 anmK 8363002 anmK Chitinophaga pinensis DSM 2588 anhydro-N-acetylmuramic acid kinase YP_003126412.1 8531595 R 485918 CDS YP_003126413.1 256425760 8363003 complement(8532794..8533594) 1 NC_013132.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 8533594 murQ 8363003 murQ Chitinophaga pinensis DSM 2588 N-acetylmuramic acid 6-phosphate etherase YP_003126413.1 8532794 R 485918 CDS YP_003126414.1 256425761 8363004 complement(8533619..8535100) 1 NC_013132.1 PFAM: Na+/solute symporter; KEGG: aba:Acid345_3352 SSS sodium solute transporter superfamily; Na+/solute symporter 8535100 8363004 Cpin_6812 Chitinophaga pinensis DSM 2588 Na+/solute symporter YP_003126414.1 8533619 R 485918 CDS YP_003126415.1 256425762 8363005 8535255..8537702 1 NC_013132.1 PFAM: glycoside hydrolase family 9; polysaccharide deacetylase; KEGG: cja:CJA_1633 endo-1,4-beta glucanase, , cel9B; glycoside hydrolase 8537702 8363005 Cpin_6813 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003126415.1 8535255 D 485918 CDS YP_003126416.1 256425763 8363006 complement(8537695..8538942) 1 NC_013132.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 8538942 proA 8363006 proA Chitinophaga pinensis DSM 2588 gamma-glutamyl phosphate reductase YP_003126416.1 8537695 R 485918 CDS YP_003126417.1 256425764 8363007 complement(8538967..8540001) 1 NC_013132.1 KEGG: vvy:VV0858 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein; glutamate 5-kinase 8540001 8363007 Cpin_6815 Chitinophaga pinensis DSM 2588 glutamate 5-kinase YP_003126417.1 8538967 R 485918 CDS YP_003126418.1 256425765 8363008 8540153..8542462 1 NC_013132.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2651 alpha-1,2-mannosidase family protein; alpha-1,2-mannosidase 8542462 8363008 Cpin_6816 Chitinophaga pinensis DSM 2588 alpha-1,2-mannosidase YP_003126418.1 8540153 D 485918 CDS YP_003126419.1 256425766 8363009 8542562..8543074 1 NC_013132.1 hypothetical protein 8543074 8363009 Cpin_6817 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126419.1 8542562 D 485918 CDS YP_003126420.1 256425767 8363010 8543823..8544281 1 NC_013132.1 hypothetical protein 8544281 8363010 Cpin_6818 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126420.1 8543823 D 485918 CDS YP_003126421.1 256425768 8363011 8544457..8545131 1 NC_013132.1 KEGG: sdy:SDY_2035 hypothetical protein; hypothetical protein 8545131 8363011 Cpin_6819 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126421.1 8544457 D 485918 CDS YP_003126422.1 256425769 8363012 8545101..8545937 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sus:Acid_3482 integral membrane sensor signal transduction histidine kinase; histidine kinase 8545937 8363012 Cpin_6820 Chitinophaga pinensis DSM 2588 histidine kinase YP_003126422.1 8545101 D 485918 CDS YP_003126423.1 256425770 8363013 8545909..8546586 1 NC_013132.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sat:SYN_01019 two-component response regulator; LuxR family transcriptional regulator 8546586 8363013 Cpin_6821 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003126423.1 8545909 D 485918 CDS YP_003126424.1 256425771 8363014 complement(8546583..8547839) 1 NC_013132.1 KEGG: sus:Acid_3172 hypothetical protein; hypothetical protein 8547839 8363014 Cpin_6822 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126424.1 8546583 R 485918 CDS YP_003126425.1 256425772 8363015 complement(8547839..8549038) 1 NC_013132.1 PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein; glycoside hydrolase 8549038 8363015 Cpin_6823 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003126425.1 8547839 R 485918 CDS YP_003126426.1 256425773 8363016 complement(8549162..8550229) 1 NC_013132.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator 8550229 8363016 Cpin_6824 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003126426.1 8549162 R 485918 CDS YP_003126427.1 256425774 8363017 complement(8550252..8551019) 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sde:Sde_2646 phosphatidylserine decarboxylase; short-chain dehydrogenase/reductase SDR 8551019 8363017 Cpin_6825 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126427.1 8550252 R 485918 CDS YP_003126428.1 256425775 8363018 complement(8551039..8552178) 1 NC_013132.1 KEGG: sde:Sde_1281 hypothetical protein; hypothetical protein 8552178 8363018 Cpin_6826 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126428.1 8551039 R 485918 CDS YP_003126429.1 256425776 8363019 complement(8552185..8553021) 1 NC_013132.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 8553021 8363019 Cpin_6827 Chitinophaga pinensis DSM 2588 5-keto-4-deoxyuronate isomerase YP_003126429.1 8552185 R 485918 CDS YP_003126430.1 256425777 8363020 8553295..8554941 1 NC_013132.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; KEGG: csa:Csal_1735 altronate dehydratase; altronate dehydratase 8554941 8363020 Cpin_6828 Chitinophaga pinensis DSM 2588 altronate dehydratase YP_003126430.1 8553295 D 485918 CDS YP_003126431.1 256425778 8363021 complement(8555113..8556477) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; ABC transporter substrate-binding protein; KEGG: xac:XAC4255 hexuranate transporter; major facilitator superfamily protein 8556477 8363021 Cpin_6829 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003126431.1 8555113 R 485918 CDS YP_003126432.1 256425779 8363022 complement(8556694..8557356) 1 NC_013132.1 PFAM: KDPG and KHG aldolase; KEGG: cak:Caul_1760 keto-hydroxyglutarate- aldolase/keto-deoxy-phosphogluconate aldolase; KDPG and KHG aldolase 8557356 8363022 Cpin_6830 Chitinophaga pinensis DSM 2588 KDPG and KHG aldolase YP_003126432.1 8556694 R 485918 CDS YP_003126433.1 256425780 8363023 complement(8557359..8558357) 1 NC_013132.1 PFAM: PfkB domain protein; KEGG: sus:Acid_2122 ribokinase-like domain- containing protein; PfkB domain-containing protein 8558357 8363023 Cpin_6831 Chitinophaga pinensis DSM 2588 PfkB domain-containing protein YP_003126433.1 8557359 R 485918 CDS YP_003126434.1 256425781 8363024 complement(8558370..8559764) 1 NC_013132.1 PFAM: glucuronate isomerase; KEGG: cja:CJA_2772 glucuronate isomerase; glucuronate isomerase 8559764 8363024 Cpin_6832 Chitinophaga pinensis DSM 2588 glucuronate isomerase YP_003126434.1 8558370 R 485918 CDS YP_003126435.1 256425782 8363025 complement(8559780..8561285) 1 NC_013132.1 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 8561285 8363025 Cpin_6833 Chitinophaga pinensis DSM 2588 altronate oxidoreductase YP_003126435.1 8559780 R 485918 CDS YP_003126436.1 256425783 8363026 8561465..8562565 1 NC_013132.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 8562565 mnmA 8363026 mnmA Chitinophaga pinensis DSM 2588 tRNA-specific 2-thiouridylase MnmA YP_003126436.1 8561465 D 485918 CDS YP_003126437.1 256425784 8363027 8562784..8563791 1 NC_013132.1 PFAM: protein of unknown function DUF1016; KEGG: apl:APL_1460 hypothetical protein; hypothetical protein 8563791 8363027 Cpin_6835 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126437.1 8562784 D 485918 CDS YP_003126438.1 256425785 8363028 8563810..8564151 1 NC_013132.1 PFAM: Domain of unknown function DUF1801; hypothetical protein 8564151 8363028 Cpin_6836 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126438.1 8563810 D 485918 CDS YP_003126439.1 256425786 8363029 complement(8564161..8565051) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8565051 8363029 Cpin_6837 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126439.1 8564161 R 485918 CDS YP_003126440.1 256425787 8363030 complement(8565069..8566229) 1 NC_013132.1 PFAM: Fmu (Sun) domain protein; KEGG: saz:Sama_1086 Fmu (Sun); Fmu (Sun) domain-containing protein 8566229 8363030 Cpin_6838 Chitinophaga pinensis DSM 2588 Fmu (Sun) domain-containing protein YP_003126440.1 8565069 R 485918 CDS YP_003126441.1 256425788 8363031 complement(8566336..8567910) 1 NC_013132.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: rsq:Rsph17025_0076 dihydrolipoamide acetyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 8567910 8363031 Cpin_6839 Chitinophaga pinensis DSM 2588 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_003126441.1 8566336 R 485918 CDS YP_003126442.1 256425789 8363032 complement(8567978..8570728) 1 NC_013132.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 8570728 sucA 8363032 sucA Chitinophaga pinensis DSM 2588 2-oxoglutarate dehydrogenase E1 component YP_003126442.1 8567978 R 485918 CDS YP_003126443.1 256425790 8363033 8571045..8571299 1 NC_013132.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: nis:NIS_0105 30S ribosomal protein S20; 30S ribosomal protein S20 8571299 8363033 Cpin_6841 Chitinophaga pinensis DSM 2588 30S ribosomal protein S20 YP_003126443.1 8571045 D 485918 CDS YP_003126444.1 256425791 8363034 8572497..8574230 1 NC_013132.1 KEGG: spl:Spea_0137 peptidase M14 carboxypeptidase A; peptidase M14 carboxypeptidase A 8574230 8363034 Cpin_6842 Chitinophaga pinensis DSM 2588 peptidase M14 carboxypeptidase A YP_003126444.1 8572497 D 485918 CDS YP_003126445.1 256425792 8363035 complement(8574357..8575421) 1 NC_013132.1 KEGG: ppd:Ppro_0927 beta-ketoacyl synthase; hypothetical protein 8575421 8363035 Cpin_6843 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126445.1 8574357 R 485918 CDS YP_003126446.1 256425793 8363036 complement(8575411..8576625) 1 NC_013132.1 PFAM: beta-ketoacyl synthase; KEGG: scl:sce5922 oxoacyl-(acyl-carrier-protein) synthase II; beta-ketoacyl synthase 8576625 8363036 Cpin_6844 Chitinophaga pinensis DSM 2588 beta-ketoacyl synthase YP_003126446.1 8575411 R 485918 CDS YP_003126447.1 256425794 8363037 complement(8576638..8576895) 1 NC_013132.1 KEGG: pca:Pcar_2651 acyl-carrier protein; acyl-carrier protein 8576895 8363037 Cpin_6845 Chitinophaga pinensis DSM 2588 acyl-carrier protein YP_003126447.1 8576638 R 485918 CDS YP_003126448.1 256425795 8363038 complement(8577033..8578325) 1 NC_013132.1 PFAM: ABC-2 type transporter; KEGG: dps:DP1836 ABC transporter permease; ABC transporter 8578325 8363038 Cpin_6846 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126448.1 8577033 R 485918 CDS YP_003126449.1 256425796 8363039 complement(8578336..8579073) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dps:DP1837 ABC transporter, ATP-binding protein; ABC transporter 8579073 8363039 Cpin_6847 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126449.1 8578336 R 485918 CDS YP_003126450.1 256425797 8363040 complement(8579082..8580107) 1 NC_013132.1 KEGG: dps:DP1838 hypothetical protein; hypothetical protein 8580107 8363040 Cpin_6848 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126450.1 8579082 R 485918 CDS YP_003126451.1 256425798 8363041 complement(8580153..8580551) 1 NC_013132.1 KEGG: dar:Daro_2369 hypothetical protein; hypothetical protein 8580551 8363041 Cpin_6849 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126451.1 8580153 R 485918 CDS YP_003126452.1 256425799 8363042 complement(8580745..8581881) 1 NC_013132.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 8581881 8363042 Cpin_6850 Chitinophaga pinensis DSM 2588 3-oxoacyl-ACP synthase YP_003126452.1 8580745 R 485918 CDS YP_003126453.1 256425800 8363043 complement(8582181..8583101) 1 NC_013132.1 KEGG: plu:plu2163 hypothetical protein; hypothetical protein 8583101 8363043 Cpin_6851 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126453.1 8582181 R 485918 CDS YP_003126454.1 256425801 8363044 complement(8583475..8584128) 1 NC_013132.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bpy:Bphyt_7117 methyltransferase type 11; type 11 methyltransferase 8584128 8363044 Cpin_6852 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003126454.1 8583475 R 485918 CDS YP_003126455.1 256425802 8363045 complement(8584266..8584985) 1 NC_013132.1 KEGG: asa:ASA_4182 hypothetical protein; hypothetical protein 8584985 8363045 Cpin_6853 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126455.1 8584266 R 485918 CDS YP_003126456.1 256425803 8363046 8585121..8586659 1 NC_013132.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 8586659 guaA 8363046 guaA Chitinophaga pinensis DSM 2588 GMP synthase YP_003126456.1 8585121 D 485918 CDS YP_003126457.1 256425804 8363047 8586775..8588097 1 NC_013132.1 hypothetical protein 8588097 8363047 Cpin_6855 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126457.1 8586775 D 485918 CDS YP_003126458.1 256425805 8363048 8588337..8589359 1 NC_013132.1 KEGG: pfo:Pfl01_1212 hypothetical protein; hypothetical protein 8589359 8363048 Cpin_6856 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126458.1 8588337 D 485918 CDS YP_003126459.1 256425806 8363049 8589369..8590961 1 NC_013132.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: dsh:Dshi_2589 ATP-dependent DNA ligase; ATP dependent DNA ligase 8590961 8363049 Cpin_6857 Chitinophaga pinensis DSM 2588 ATP dependent DNA ligase YP_003126459.1 8589369 D 485918 CDS YP_003126460.1 256425807 8363050 8591043..8591546 1 NC_013132.1 PFAM: regulatory protein AsnC/Lrp family; regulatory protein ArsR; SMART: regulatory protein AsnC/Lrp family; KEGG: vsp:VS_2168 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 8591546 8363050 Cpin_6858 Chitinophaga pinensis DSM 2588 AsnC family transcriptional regulator YP_003126460.1 8591043 D 485918 CDS YP_003126461.1 256425808 8363051 complement(8591543..8592136) 1 NC_013132.1 hypothetical protein 8592136 8363051 Cpin_6859 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126461.1 8591543 R 485918 CDS YP_003126462.1 256425809 8363052 8592209..8593255 1 NC_013132.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: psb:Psyr_1838 peptidase U61, LD- carboxypeptidase A; peptidase U61 LD-carboxypeptidase A 8593255 8363052 Cpin_6860 Chitinophaga pinensis DSM 2588 peptidase U61 LD-carboxypeptidase A YP_003126462.1 8592209 D 485918 CDS YP_003126463.1 256425810 8363053 8593316..8594032 1 NC_013132.1 hypothetical protein 8594032 8363053 Cpin_6861 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126463.1 8593316 D 485918 CDS YP_003126464.1 256425811 8363054 8594035..8594196 1 NC_013132.1 hypothetical protein 8594196 8363054 Cpin_6862 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126464.1 8594035 D 485918 CDS YP_003126465.1 256425812 8363055 complement(8594275..8594490) 1 NC_013132.1 hypothetical protein 8594490 8363055 Cpin_6863 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126465.1 8594275 R 485918 CDS YP_003126466.1 256425813 8363056 8594961..8597423 1 NC_013132.1 PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: psa:PST_2663 ATP-dependent helicase, DEAD box family; DEAD/DEAH box helicase 8597423 8363056 Cpin_6864 Chitinophaga pinensis DSM 2588 DEAD/DEAH box helicase YP_003126466.1 8594961 D 485918 CDS YP_003126467.1 256425814 8363057 8597456..8598103 1 NC_013132.1 PFAM: metallophosphoesterase; KEGG: pmy:Pmen_2193 ICC-like phosphoesterase; metallophosphoesterase 8598103 8363057 Cpin_6865 Chitinophaga pinensis DSM 2588 metallophosphoesterase YP_003126467.1 8597456 D 485918 CDS YP_003126468.1 256425815 8363058 8598103..8599002 1 NC_013132.1 PFAM: histone deacetylase superfamily; KEGG: pcr:Pcryo_2116 histone deacetylase superfamily protein; histone deacetylase superfamily protein 8599002 8363058 Cpin_6866 Chitinophaga pinensis DSM 2588 histone deacetylase superfamily protein YP_003126468.1 8598103 D 485918 CDS YP_003126469.1 256425816 8363059 8599057..8599290 1 NC_013132.1 hypothetical protein 8599290 8363059 Cpin_6867 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126469.1 8599057 D 485918 CDS YP_003126470.1 256425817 8363060 complement(8599712..8600464) 1 NC_013132.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; SMART: helix-turn-helix domain protein; KEGG: cha:CHAB381_0248 hypothetical protein; XRE family transcriptional regulator 8600464 8363060 Cpin_6868 Chitinophaga pinensis DSM 2588 XRE family transcriptional regulator YP_003126470.1 8599712 R 485918 CDS YP_003126471.1 256425818 8363061 8600551..8601048 1 NC_013132.1 KEGG: scl:sce0333 hypothetical protein; hypothetical protein 8601048 8363061 Cpin_6869 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126471.1 8600551 D 485918 CDS YP_003126472.1 256425819 8363062 complement(8601138..8601815) 1 NC_013132.1 PFAM: protein of unknown function DUF1648; KEGG: bcr:BCAH187_A4974 conserved membrane protein YvaZ; hypothetical protein 8601815 8363062 Cpin_6870 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126472.1 8601138 R 485918 CDS YP_003126473.1 256425820 8363063 8602017..8603231 1 NC_013132.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sus:Acid_0850 DNA-directed DNA polymerase; DNA-directed DNA polymerase 8603231 8363063 Cpin_6871 Chitinophaga pinensis DSM 2588 DNA-directed DNA polymerase YP_003126473.1 8602017 D 485918 CDS YP_003126474.1 256425821 8363064 8603242..8606190 1 NC_013132.1 KEGG: pca:Pcar_1741 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 8606190 8363064 Cpin_6872 Chitinophaga pinensis DSM 2588 DNA polymerase III subunit alpha YP_003126474.1 8603242 D 485918 CDS YP_003126475.1 256425822 8363065 8606395..8607999 1 NC_013132.1 hypothetical protein 8607999 8363065 Cpin_6873 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126475.1 8606395 D 485918 CDS YP_003126476.1 256425823 8363066 complement(8608074..8609396) 1 NC_013132.1 KEGG: sus:Acid_6982 aspartate kinase III; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase 8609396 8363066 Cpin_6874 Chitinophaga pinensis DSM 2588 aspartate kinase YP_003126476.1 8608074 R 485918 CDS YP_003126477.1 256425824 8363067 complement(8609474..8610547) 1 NC_013132.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: sat:SYN_02526 malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase 8610547 8363067 Cpin_6875 Chitinophaga pinensis DSM 2588 malate/L-lactate dehydrogenase YP_003126477.1 8609474 R 485918 CDS YP_003126478.1 256425825 8363068 complement(8610604..8610918) 1 NC_013132.1 KEGG: mxa:MXAN_6763 hypothetical protein; hypothetical protein 8610918 8363068 Cpin_6876 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126478.1 8610604 R 485918 CDS YP_003126479.1 256425826 8363069 complement(8611012..8612352) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8612352 8363069 Cpin_6877 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126479.1 8611012 R 485918 CDS YP_003126480.1 256425827 8363070 complement(8612373..8615609) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor 8615609 8363070 Cpin_6878 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126480.1 8612373 R 485918 CDS YP_003126481.1 256425828 8363071 complement(8615873..8617312) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8617312 8363071 Cpin_6879 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126481.1 8615873 R 485918 CDS YP_003126482.1 256425829 8363072 complement(8617332..8620577) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8620577 8363072 Cpin_6880 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126482.1 8617332 R 485918 CDS YP_003126483.1 256425830 8363073 complement(8620675..8620908) 1 NC_013132.1 hypothetical protein 8620908 8363073 Cpin_6881 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126483.1 8620675 R 485918 CDS YP_003126484.1 256425831 8363074 complement(8621077..8623086) 1 NC_013132.1 hypothetical protein 8623086 8363074 Cpin_6882 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126484.1 8621077 R 485918 CDS YP_003126485.1 256425832 8363075 8623228..8623329 1 NC_013132.1 hypothetical protein 8623329 8363075 Cpin_6883 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126485.1 8623228 D 485918 CDS YP_003126486.1 256425833 8363076 complement(8623526..8624347) 1 NC_013132.1 hypothetical protein 8624347 8363076 Cpin_6884 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126486.1 8623526 R 485918 CDS YP_003126487.1 256425834 8363077 complement(8624498..8625133) 1 NC_013132.1 PFAM: deoxynucleoside kinase; KEGG: hypothetical protein; deoxynucleoside kinase 8625133 8363077 Cpin_6885 Chitinophaga pinensis DSM 2588 deoxynucleoside kinase YP_003126487.1 8624498 R 485918 CDS YP_003126488.1 256425835 8363078 complement(8625270..8626274) 1 NC_013132.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 8626274 8363078 Cpin_6886 Chitinophaga pinensis DSM 2588 tryptophanyl-tRNA synthetase YP_003126488.1 8625270 R 485918 CDS YP_003126489.1 256425836 8363079 8626383..8626673 1 NC_013132.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: pca:Pcar_2167 glutamyl-tRNA (Gln) amidotransferase, C subunit, GatC-like; glutamyl-tRNA(Gln) amidotransferase subunit C 8626673 8363079 Cpin_6887 Chitinophaga pinensis DSM 2588 glutamyl-tRNA(Gln) amidotransferase subunit C YP_003126489.1 8626383 D 485918 CDS YP_003126490.1 256425837 8363080 8626699..8627415 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_4199 macrolide efflux ABC transporter, ATP-binding protein; macrolide ABC transporter ATP-binding proten 8627415 8363080 Cpin_6888 Chitinophaga pinensis DSM 2588 macrolide ABC transporter ATP-binding proten YP_003126490.1 8626699 D 485918 CDS YP_003126491.1 256425838 8363081 8627546..8628109 1 NC_013132.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: hypothetical protein; ATP/cobalamin adenosyltransferase 8628109 8363081 Cpin_6889 Chitinophaga pinensis DSM 2588 ATP/cobalamin adenosyltransferase YP_003126491.1 8627546 D 485918 CDS YP_003126492.1 256425839 8363082 complement(8628117..8628797) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VP0978 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein 8628797 8363082 Cpin_6890 Chitinophaga pinensis DSM 2588 ABC transporter ATP-binding protein YP_003126492.1 8628117 R 485918 CDS YP_003126493.1 256425840 8363083 8628898..8629119 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8629119 8363083 Cpin_6891 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126493.1 8628898 D 485918 CDS YP_003126494.1 256425841 8363084 complement(8629675..8630487) 1 NC_013132.1 KEGG: sit:TM1040_1147 enoyl-(acyl carrier protein) reductase; enoyl-ACP reductase (NADH) 8630487 8363084 Cpin_6892 Chitinophaga pinensis DSM 2588 enoyl-ACP reductase (NADH) YP_003126494.1 8629675 R 485918 CDS YP_003126495.1 256425842 8363085 complement(8630569..8632218) 1 NC_013132.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: swp:swp_1346 DNA repair protein RecN; DNA repair protein RecN 8632218 8363085 Cpin_6893 Chitinophaga pinensis DSM 2588 DNA repair protein RecN YP_003126495.1 8630569 R 485918 CDS YP_003126496.1 256425843 8363086 complement(8632307..8633794) 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: similar to CG8777-PA; hypothetical protein 8633794 8363086 Cpin_6894 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126496.1 8632307 R 485918 CDS YP_003126497.1 256425844 8363087 complement(8633942..8634694) 1 NC_013132.1 PFAM: protein of unknown function DUF164; KEGG: nis:NIS_1509 hypothetical protein; hypothetical protein 8634694 8363087 Cpin_6895 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126497.1 8633942 R 485918 CDS YP_003126498.1 256425845 8363088 complement(8634703..8635797) 1 NC_013132.1 PFAM: protein of unknown function DUF34; KEGG: hypothetical protein; hypothetical protein 8635797 8363088 Cpin_6896 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126498.1 8634703 R 485918 CDS YP_003126499.1 256425846 8363089 8635842..8637359 1 NC_013132.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mxa:MXAN_5988 thermostable carboxypeptidase 1; carboxypeptidase Taq 8637359 8363089 Cpin_6897 Chitinophaga pinensis DSM 2588 carboxypeptidase Taq YP_003126499.1 8635842 D 485918 CDS YP_003126500.1 256425847 8363090 complement(8637354..8638022) 1 NC_013132.1 PFAM: rhodanese domain protein; thioredoxin domain protein; SMART: rhodanese domain protein; KEGG: dvm:DvMF_2623 rhodanese domain protein; rhodanese domain-containing protein 8638022 8363090 Cpin_6898 Chitinophaga pinensis DSM 2588 rhodanese domain-containing protein YP_003126500.1 8637354 R 485918 CDS YP_003126501.1 256425848 8363091 8638297..8643117 1 NC_013132.1 KEGG: sil:SPO0571 PKD domain-containing protein; TIGRFAM: conserved repeat domain protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; hypothetical protein 8643117 8363091 Cpin_6899 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126501.1 8638297 D 485918 CDS YP_003126502.1 256425849 8363092 8643170..8644207 1 NC_013132.1 hypothetical protein 8644207 8363092 Cpin_6900 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126502.1 8643170 D 485918 CDS YP_003126503.1 256425850 8363093 8644274..8644744 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 8644744 8363093 Cpin_6901 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003126503.1 8644274 D 485918 CDS YP_003126504.1 256425851 8363094 8644781..8645233 1 NC_013132.1 hypothetical protein 8645233 8363094 Cpin_6902 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126504.1 8644781 D 485918 CDS YP_003126505.1 256425852 8363095 complement(8645318..8646490) 1 NC_013132.1 PFAM: RNA methylase; PUA domain containing protein; SMART: PUA domain containing protein; KEGG: glo:Glov_1090 protein of unknown function Met10; RNA methylase 8646490 8363095 Cpin_6903 Chitinophaga pinensis DSM 2588 RNA methylase YP_003126505.1 8645318 R 485918 CDS YP_003126506.1 256425853 8363096 8646659..8647216 1 NC_013132.1 PFAM: GrpE protein; KEGG: scl:sce0004 chloroplast GrpE protein; GrpE protein HSP-70 cofactor 8647216 8363096 Cpin_6904 Chitinophaga pinensis DSM 2588 GrpE protein HSP-70 cofactor YP_003126506.1 8646659 D 485918 CDS YP_003126507.1 256425854 8363097 8647282..8648451 1 NC_013132.1 KEGG: azo:azo1062 chaperone protein DnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ 8648451 8363097 Cpin_6905 Chitinophaga pinensis DSM 2588 chaperone protein DnaJ YP_003126507.1 8647282 D 485918 CDS YP_003126508.1 256425855 8363098 8648567..8649514 1 NC_013132.1 PFAM: methyltransferase type 11; KEGG: cvi:CV_1104 oxidoreductase; type 11 methyltransferase 8649514 8363098 Cpin_6906 Chitinophaga pinensis DSM 2588 type 11 methyltransferase YP_003126508.1 8648567 D 485918 CDS YP_003126509.1 256425856 8363099 complement(8649520..8651286) 1 NC_013132.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dal:Dalk_0318 von Willebrand factor type A; von Willebrand factor type A 8651286 8363099 Cpin_6907 Chitinophaga pinensis DSM 2588 von Willebrand factor type A YP_003126509.1 8649520 R 485918 CDS YP_003126510.1 256425857 8363100 complement(8651585..8652130) 1 NC_013132.1 KEGG: hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 8652130 8363100 Cpin_6908 Chitinophaga pinensis DSM 2588 hypoxanthine phosphoribosyltransferase YP_003126510.1 8651585 R 485918 CDS YP_003126511.1 256425858 8363101 complement(8652153..8654012) 1 NC_013132.1 PFAM: Mannosyl-glycoprotein endo-beta-N- acetylglucosamidase; peptidoglycan-binding LysM; SMART: Lysozyme subfamily 2; peptidoglycan-binding LysM; KEGG: hypothetical protein; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 8654012 8363101 Cpin_6909 Chitinophaga pinensis DSM 2588 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_003126511.1 8652153 R 485918 CDS YP_003126512.1 256425859 8363102 complement(8654049..8654693) 1 NC_013132.1 PFAM: O-methyltransferase family 3; KEGG: mxa:MXAN_5983 O-methyltransferase family protein; O-methyltransferase family protein 8654693 8363102 Cpin_6910 Chitinophaga pinensis DSM 2588 O-methyltransferase family protein YP_003126512.1 8654049 R 485918 CDS YP_003126513.1 256425860 8363103 complement(8654730..8655515) 1 NC_013132.1 PFAM: conserved hypothetical protein; KEGG: hypothetical protein; hypothetical protein 8655515 8363103 Cpin_6911 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126513.1 8654730 R 485918 CDS YP_003126514.1 256425861 8363104 complement(8656162..8656743) 1 NC_013132.1 hypothetical protein 8656743 8363104 Cpin_6912 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126514.1 8656162 R 485918 CDS YP_003126515.1 256425862 8363105 complement(8656929..8657954) 1 NC_013132.1 hypothetical protein 8657954 8363105 Cpin_6913 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126515.1 8656929 R 485918 CDS YP_003126516.1 256425863 8363106 complement(8657959..8661651) 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: sus:Acid_3175 hypothetical protein; PKD domain-containing protein 8661651 8363106 Cpin_6914 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003126516.1 8657959 R 485918 CDS YP_003126517.1 256425864 8363107 complement(8661903..8664014) 1 NC_013132.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 8664014 8363107 Cpin_6915 Chitinophaga pinensis DSM 2588 ATP-dependent DNA helicase RecG YP_003126517.1 8661903 R 485918 CDS YP_003126518.1 256425865 8363108 complement(8664114..8665433) 1 NC_013132.1 KEGG: GK16526 gene product from transcript GK16526- RA; TIGRFAM: citrate (Si)-synthase; PFAM: Citrate synthase; type I citrate synthase 8665433 8363108 Cpin_6916 Chitinophaga pinensis DSM 2588 type I citrate synthase YP_003126518.1 8664114 R 485918 CDS YP_003126519.1 256425866 8363109 complement(8665629..8666708) 1 NC_013132.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sat:SYN_00415 permease; YjgP/YjgQ family permease 8666708 8363109 Cpin_6917 Chitinophaga pinensis DSM 2588 YjgP/YjgQ family permease YP_003126519.1 8665629 R 485918 CDS YP_003126520.1 256425867 8363110 complement(8666731..8667861) 1 NC_013132.1 KEGG: gur:Gura_1716 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 8667861 8363110 Cpin_6918 Chitinophaga pinensis DSM 2588 queuine tRNA-ribosyltransferase YP_003126520.1 8666731 R 485918 CDS YP_003126521.1 256425868 8363111 8667963..8669189 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: bsu:BSU04300 hypothetical protein; family 2 glycosyl transferase 8669189 8363111 Cpin_6919 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003126521.1 8667963 D 485918 CDS YP_003126522.1 256425869 8363112 8669294..8669917 1 NC_013132.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: hypothetical protein; methyltransferase GidB 8669917 8363112 Cpin_6920 Chitinophaga pinensis DSM 2588 methyltransferase GidB YP_003126522.1 8669294 D 485918 CDS YP_003126523.1 256425870 8363113 8670052..8670609 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: aba:Acid345_3448 sigma-24, ECF subfamily; ECF subfamily RNA polymerase sigma-24 subunit 8670609 8363113 Cpin_6921 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126523.1 8670052 D 485918 CDS YP_003126524.1 256425871 8363114 8670621..8671019 1 NC_013132.1 KEGG: aba:Acid345_3449 hypothetical protein; hypothetical protein 8671019 8363114 Cpin_6922 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126524.1 8670621 D 485918 CDS YP_003126525.1 256425872 8363115 8671058..8671267 1 NC_013132.1 hypothetical protein 8671267 8363115 Cpin_6923 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126525.1 8671058 D 485918 CDS YP_003126526.1 256425873 8363116 complement(8671389..8671592) 1 NC_013132.1 hypothetical protein 8671592 8363116 Cpin_6924 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126526.1 8671389 R 485918 CDS YP_003126527.1 256425874 8363117 complement(8672000..8673886) 1 NC_013132.1 KEGG: mmr:Mmar10_1430 aminopeptidase; aminopeptidase N 8673886 8363117 Cpin_6925 Chitinophaga pinensis DSM 2588 aminopeptidase N YP_003126527.1 8672000 R 485918 CDS YP_003126528.1 256425875 8363118 complement(8673925..8674593) 1 NC_013132.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pca:Pcar_2215 tetrapyrrole methylase family protein; uroporphyrin-III C/tetrapyrrole methyltransferase 8674593 8363118 Cpin_6926 Chitinophaga pinensis DSM 2588 uroporphyrin-III C/tetrapyrrole methyltransferase YP_003126528.1 8673925 R 485918 CDS YP_003126529.1 256425876 8363119 complement(8674701..8674946) 1 NC_013132.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: nis:NIS_0873 phosphoribosylformylglycinamidine synthase, small subunit; phosphoribosylformylglycinamidine synthase subunit PurS 8674946 8363119 Cpin_6927 Chitinophaga pinensis DSM 2588 phosphoribosylformylglycinamidine synthase subunit PurS YP_003126529.1 8674701 R 485918 CDS YP_003126530.1 256425877 8363120 complement(8674995..8675768) 1 NC_013132.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: glo:Glov_2499 CDP-diacylglycerol/serine O- phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 8675768 8363120 Cpin_6928 Chitinophaga pinensis DSM 2588 CDP-alcohol phosphatidyltransferase YP_003126530.1 8674995 R 485918 CDS YP_003126531.1 256425878 8363121 complement(8675852..8677144) 1 NC_013132.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: bcz:BCZK1712 Xaa-Pro aminopeptidase; peptidase M24 8677144 8363121 Cpin_6929 Chitinophaga pinensis DSM 2588 peptidase M24 YP_003126531.1 8675852 R 485918 CDS YP_003126532.1 256425879 8363122 8677636..8679237 1 NC_013132.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 8679237 8363122 Cpin_6930 Chitinophaga pinensis DSM 2588 phosphoenolpyruvate carboxykinase YP_003126532.1 8677636 D 485918 CDS YP_003126533.1 256425880 8363123 8679394..8680278 1 NC_013132.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: ccv:CCV52592_0799 bifunctional protein FolD; methenyltetrahydrofolate cyclohydrolase 8680278 8363123 Cpin_6931 Chitinophaga pinensis DSM 2588 methenyltetrahydrofolate cyclohydrolase YP_003126533.1 8679394 D 485918 CDS YP_003126534.1 256425881 8363124 8680409..8681038 1 NC_013132.1 KEGG: bmv:BMASAVP1_A2794 hypothetical protein; hypothetical protein 8681038 8363124 Cpin_6932 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126534.1 8680409 D 485918 CDS YP_003126535.1 256425882 8363125 8681120..8683012 1 NC_013132.1 PFAM: OmpA/MotB domain protein; hypothetical protein; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein; OmpA/MotB domain-containing protein 8683012 8363125 Cpin_6933 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003126535.1 8681120 D 485918 CDS YP_003126536.1 256425883 8363126 complement(8683232..8684050) 1 NC_013132.1 TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (class B); KEGG: hypothetical protein; K01078 acid phosphatase; 5'-nucleotidase 8684050 8363126 Cpin_6934 Chitinophaga pinensis DSM 2588 5'-nucleotidase YP_003126536.1 8683232 R 485918 CDS YP_003126537.1 256425884 8363127 8684082..8685218 1 NC_013132.1 KEGG: ppd:Ppro_0529 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; DNA protecting protein DprA 8685218 8363127 Cpin_6935 Chitinophaga pinensis DSM 2588 DNA protecting protein DprA YP_003126537.1 8684082 D 485918 CDS YP_003126538.1 256425885 8363128 8686481..8687953 1 NC_013132.1 KEGG: bcy:Bcer98_0008 inositol-5-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein; inosine-5'-monophosphate dehydrogenase 8687953 8363128 Cpin_6936 Chitinophaga pinensis DSM 2588 inosine-5'-monophosphate dehydrogenase YP_003126538.1 8686481 D 485918 CDS YP_003126539.1 256425886 8363129 8688233..8689849 1 NC_013132.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ppd:Ppro_2037 apolipoprotein N- acyltransferase; apolipoprotein N-acyltransferase 8689849 8363129 Cpin_6937 Chitinophaga pinensis DSM 2588 apolipoprotein N-acyltransferase YP_003126539.1 8688233 D 485918 CDS YP_003126540.1 256425887 8363130 8689839..8690678 1 NC_013132.1 PFAM: alpha/beta hydrolase; Ndr family protein; KEGG: aba:Acid345_3365 alpha/beta hydrolase; alpha/beta hydrolase 8690678 8363130 Cpin_6938 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003126540.1 8689839 D 485918 CDS YP_003126541.1 256425888 8363131 8690675..8693335 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: shm:Shewmr7_0119 peptidase M6, immune inhibitor A; PKD domain-containing protein 8693335 8363131 Cpin_6939 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003126541.1 8690675 D 485918 CDS YP_003126542.1 256425889 8363132 8693492..8695420 1 NC_013132.1 PFAM: PKD domain containing protein; SMART: PKD domain containing protein; KEGG: dal:Dalk_2289 PKD domain containing protein; PKD domain-containing protein 8695420 8363132 Cpin_6940 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003126542.1 8693492 D 485918 CDS YP_003126543.1 256425890 8363133 8695431..8696186 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oxidoreductase, short chain dehydrogenase/reductase family; K00540; short-chain dehydrogenase/reductase SDR 8696186 8363133 Cpin_6941 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126543.1 8695431 D 485918 CDS YP_003126544.1 256425891 8363134 8696385..8696525 1 NC_013132.1 hypothetical protein 8696525 8363134 Cpin_6942 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126544.1 8696385 D 485918 CDS YP_003126545.1 256425892 8363135 complement(8696581..8697792) 1 NC_013132.1 KEGG: hch:HCH_03572 BNR/Asp-box repeat-containing protein; hypothetical protein 8697792 8363135 Cpin_6943 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126545.1 8696581 R 485918 CDS YP_003126546.1 256425893 8363136 complement(8697892..8700165) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: tbd:Tbd_0909 TonB-dependent receptor; TonB-dependent receptor 8700165 8363136 Cpin_6944 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126546.1 8697892 R 485918 CDS YP_003126547.1 256425894 8363137 complement(8700403..8700738) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8700738 8363137 Cpin_6945 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126547.1 8700403 R 485918 CDS YP_003126548.1 256425895 8363138 complement(8701006..8708271) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8708271 8363138 Cpin_6946 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126548.1 8701006 R 485918 CDS YP_003126549.1 256425896 8363139 complement(8708310..8708897) 1 NC_013132.1 KEGG: Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA 8708897 8363139 Cpin_6947 Chitinophaga pinensis DSM 2588 Holliday junction DNA helicase RuvA YP_003126549.1 8708310 R 485918 CDS YP_003126550.1 256425897 8363140 8709035..8710033 1 NC_013132.1 KEGG: sfu:Sfum_0113 3-oxoacyl-(acyl-carrier- protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; 3-oxoacyl-ACP synthase 8710033 8363140 Cpin_6948 Chitinophaga pinensis DSM 2588 3-oxoacyl-ACP synthase YP_003126550.1 8709035 D 485918 CDS YP_003126551.1 256425898 8363141 complement(8710365..8712239) 1 NC_013132.1 KEGG: amc:MADE_00899 sensory box histidine kinase/response regulator; hypothetical protein 8712239 8363141 Cpin_6949 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126551.1 8710365 R 485918 CDS YP_003126552.1 256425899 8363142 complement(8712236..8714401) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: aci:ACIAD3176 sensory transduction histidine kinase; histidine kinase 8714401 8363142 Cpin_6950 Chitinophaga pinensis DSM 2588 histidine kinase YP_003126552.1 8712236 R 485918 CDS YP_003126553.1 256425900 8363143 complement(8714504..8715199) 1 NC_013132.1 PFAM: NUDIX hydrolase; KEGG: scl:sce2352 hypothetical protein; NUDIX hydrolase 8715199 8363143 Cpin_6951 Chitinophaga pinensis DSM 2588 NUDIX hydrolase YP_003126553.1 8714504 R 485918 CDS YP_003126554.1 256425901 8363144 complement(8715245..8715739) 1 NC_013132.1 PFAM: DinB family protein; KEGG: aci:ACIAD2653 hypothetical protein; DinB family protein 8715739 8363144 Cpin_6952 Chitinophaga pinensis DSM 2588 DinB family protein YP_003126554.1 8715245 R 485918 CDS YP_003126555.1 256425902 8363145 8715826..8716290 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase-like protein; N-acetyltransferase GCN5 8716290 8363145 Cpin_6953 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003126555.1 8715826 D 485918 CDS YP_003126556.1 256425903 8363146 complement(8716390..8717283) 1 NC_013132.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: bsu:BSU15900 acyl-carrier-protein S- malonyltransferase; malonyl CoA-acyl carrier protein transacylase 8717283 8363146 Cpin_6954 Chitinophaga pinensis DSM 2588 malonyl CoA-acyl carrier protein transacylase YP_003126556.1 8716390 R 485918 CDS YP_003126557.1 256425904 8363147 8717513..8717959 1 NC_013132.1 hypothetical protein 8717959 8363147 Cpin_6955 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126557.1 8717513 D 485918 CDS YP_003126558.1 256425905 8363148 complement(8718030..8718617) 1 NC_013132.1 KEGG: aba:Acid345_2208 GTP cyclohydrolase; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; GTP cyclohydrolase I 8718617 8363148 Cpin_6956 Chitinophaga pinensis DSM 2588 GTP cyclohydrolase I YP_003126558.1 8718030 R 485918 CDS YP_003126559.1 256425906 8363149 complement(8718692..8719105) 1 NC_013132.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: 6-pyruvoyltetrahydropterin synthase, ; K01737 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl-tetrahydropterin synthase 8719105 8363149 Cpin_6957 Chitinophaga pinensis DSM 2588 6-pyruvoyl-tetrahydropterin synthase YP_003126559.1 8718692 R 485918 CDS YP_003126560.1 256425907 8363150 8719185..8719835 1 NC_013132.1 PFAM: purine or other phosphorylase family 1; KEGG: gsu:GSU0453 MTA/SAH nucleosidase; purine or other phosphorylase family 1 8719835 8363150 Cpin_6958 Chitinophaga pinensis DSM 2588 purine or other phosphorylase family 1 YP_003126560.1 8719185 D 485918 CDS YP_003126561.1 256425908 8363151 8719826..8720611 1 NC_013132.1 PFAM: protein of unknown function DUF191; KEGG: afw:Anae109_1615 hypothetical protein; hypothetical protein 8720611 8363151 Cpin_6959 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126561.1 8719826 D 485918 CDS YP_003126562.1 256425909 8363152 complement(8720721..8722025) 1 NC_013132.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: FAD binding domain of DNA photolyase family protein; K01669 deoxyribodipyrimidine photo- lyase; deoxyribodipyrimidine photo-lyase 8722025 8363152 Cpin_6960 Chitinophaga pinensis DSM 2588 deoxyribodipyrimidine photo-lyase YP_003126562.1 8720721 R 485918 CDS YP_003126563.1 256425910 8363153 complement(8722179..8723015) 1 NC_013132.1 PFAM: aminotransferase class IV; KEGG: azc:AZC_1597 4-amino-4-deoxychorismate lyase; class IV aminotransferase 8723015 8363153 Cpin_6961 Chitinophaga pinensis DSM 2588 class IV aminotransferase YP_003126563.1 8722179 R 485918 CDS YP_003126564.1 256425911 8363154 complement(8723804..8724463) 1 NC_013132.1 KEGG: sse:Ssed_1452 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 8724463 8363154 Cpin_6962 Chitinophaga pinensis DSM 2588 3-oxoacid CoA-transferase subunit B YP_003126564.1 8723804 R 485918 CDS YP_003126565.1 256425912 8363155 complement(8724503..8725198) 1 NC_013132.1 KEGG: spl:Spea_2803 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 8725198 8363155 Cpin_6963 Chitinophaga pinensis DSM 2588 3-oxoacid CoA-transferase subunit A YP_003126565.1 8724503 R 485918 CDS YP_003126566.1 256425913 8363156 complement(8725226..8725768) 1 NC_013132.1 hypothetical protein 8725768 8363156 Cpin_6964 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126566.1 8725226 R 485918 CDS YP_003126567.1 256425914 8363157 complement(8725797..8726771) 1 NC_013132.1 hypothetical protein 8726771 8363157 Cpin_6965 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126567.1 8725797 R 485918 CDS YP_003126568.1 256425915 8363158 complement(8726796..8728082) 1 NC_013132.1 KEGG: bca:BCE_3912 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 8728082 8363158 Cpin_6966 Chitinophaga pinensis DSM 2588 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_003126568.1 8726796 R 485918 CDS YP_003126569.1 256425916 8363159 complement(8728165..8728506) 1 NC_013132.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; KEGG: GI18319 gene product from transcript GI18319- RA; DNA-directed RNA polymerase subunit omega 8728506 8363159 Cpin_6967 Chitinophaga pinensis DSM 2588 DNA-directed RNA polymerase subunit omega YP_003126569.1 8728165 R 485918 CDS YP_003126570.1 256425917 8363160 complement(8728530..8729438) 1 NC_013132.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: met:M446_6695 lipoprotein; outer membrane assembly lipoprotein YfiO 8729438 8363160 Cpin_6968 Chitinophaga pinensis DSM 2588 outer membrane assembly lipoprotein YfiO YP_003126570.1 8728530 R 485918 CDS YP_003126571.1 256425918 8363161 complement(8729552..8729677) 1 NC_013132.1 hypothetical protein 8729677 8363161 Cpin_6969 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126571.1 8729552 R 485918 CDS YP_003126572.1 256425919 8363162 8730226..8730693 1 NC_013132.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: bsu:BSU15130 cell division protein MraZ; MraZ protein 8730693 8363162 Cpin_6970 Chitinophaga pinensis DSM 2588 MraZ protein YP_003126572.1 8730226 D 485918 CDS YP_003126573.1 256425920 8363163 8730702..8731610 1 NC_013132.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bsu:BSU15140 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 8731610 8363163 Cpin_6971 Chitinophaga pinensis DSM 2588 S-adenosyl-methyltransferase MraW YP_003126573.1 8730702 D 485918 CDS YP_003126574.1 256425921 8363164 8731691..8732071 1 NC_013132.1 hypothetical protein 8732071 8363164 Cpin_6972 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126574.1 8731691 D 485918 CDS YP_003126575.1 256425922 8363165 8732093..8734198 1 NC_013132.1 KEGG: gme:Gmet_0406 penicillin-binding protein, transpeptidase; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; SMART: PASTA domain containing protein; peptidoglycan glycosyltransferase 8734198 8363165 Cpin_6973 Chitinophaga pinensis DSM 2588 peptidoglycan glycosyltransferase YP_003126575.1 8732093 D 485918 CDS YP_003126576.1 256425923 8363166 8734208..8735674 1 NC_013132.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 8735674 murE 8363166 murE Chitinophaga pinensis DSM 2588 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_003126576.1 8734208 D 485918 CDS YP_003126577.1 256425924 8363167 8735756..8737006 1 NC_013132.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 8737006 mraY 8363167 mraY Chitinophaga pinensis DSM 2588 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_003126577.1 8735756 D 485918 CDS YP_003126578.1 256425925 8363168 8737009..8738349 1 NC_013132.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: hypothetical protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 8738349 8363168 Cpin_6976 Chitinophaga pinensis DSM 2588 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_003126578.1 8737009 D 485918 CDS YP_003126579.1 256425926 8363169 8738403..8739596 1 NC_013132.1 PFAM: cell cycle protein; KEGG: bha:BH3276 stage V sporulation protein E; cell cycle protein 8739596 8363169 Cpin_6977 Chitinophaga pinensis DSM 2588 cell cycle protein YP_003126579.1 8738403 D 485918 CDS YP_003126580.1 256425927 8363170 8739627..8740721 1 NC_013132.1 KEGG: gbm:Gbem_0491 UDP-N-acetylglucosamine--N- acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 8740721 8363170 Cpin_6978 Chitinophaga pinensis DSM 2588 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase YP_003126580.1 8739627 D 485918 CDS YP_003126581.1 256425928 8363171 8740738..8742129 1 NC_013132.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 8742129 murC 8363171 murC Chitinophaga pinensis DSM 2588 UDP-N-acetylmuramate--L-alanine ligase YP_003126581.1 8740738 D 485918 CDS YP_003126582.1 256425929 8363172 8742148..8743212 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8743212 8363172 Cpin_6980 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126582.1 8742148 D 485918 CDS YP_003126583.1 256425930 8363173 8743209..8744612 1 NC_013132.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: mfa:Mfla_2264 cell division protein FtsA; cell division protein FtsA 8744612 8363173 Cpin_6981 Chitinophaga pinensis DSM 2588 cell division protein FtsA YP_003126583.1 8743209 D 485918 CDS YP_003126584.1 256425931 8363174 8744758..8746455 1 NC_013132.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: mgm:Mmc1_0747 cell division protein FtsZ; cell division protein FtsZ 8746455 8363174 Cpin_6982 Chitinophaga pinensis DSM 2588 cell division protein FtsZ YP_003126584.1 8744758 D 485918 CDS YP_003126585.1 256425932 8363175 complement(8746525..8746905) 1 NC_013132.1 PFAM: protein of unknown function DUF202; KEGG: afr:AFE_1554 hypothetical protein; hypothetical protein 8746905 8363175 Cpin_6983 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126585.1 8746525 R 485918 CDS YP_003126586.1 256425933 8363176 8747109..8748197 1 NC_013132.1 PFAM: protein of unknown function DUF450; KEGG: pfo:Pfl01_1326 hypothetical protein; hypothetical protein 8748197 8363176 Cpin_6984 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126586.1 8747109 D 485918 CDS YP_003126587.1 256425934 8363177 8748321..8749184 1 NC_013132.1 PFAM: pirin; KEGG: bba:Bd0309 pirin-related protein; pirin 8749184 8363177 Cpin_6985 Chitinophaga pinensis DSM 2588 pirin YP_003126587.1 8748321 D 485918 CDS YP_003126588.1 256425935 8363178 complement(8749228..8751213) 1 NC_013132.1 PFAM: K potassium transporter; KEGG: mlo:mll1417 potassium uptake protein Kup; K potassium transporter 8751213 8363178 Cpin_6986 Chitinophaga pinensis DSM 2588 K potassium transporter YP_003126588.1 8749228 R 485918 CDS YP_003126589.1 256425936 8363179 complement(8751325..8752869) 1 NC_013132.1 PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat; KEGG: csa:Csal_1798 OmpA/MotB; OmpA/MotB domain-containing protein 8752869 8363179 Cpin_6987 Chitinophaga pinensis DSM 2588 OmpA/MotB domain-containing protein YP_003126589.1 8751325 R 485918 CDS YP_003126590.1 256425937 8363180 8753182..8754147 1 NC_013132.1 PFAM: polyprenyl synthetase; KEGG: gbm:Gbem_3415 polyprenyl synthetase; trans-hexaprenyltranstransferase 8754147 8363180 Cpin_6988 Chitinophaga pinensis DSM 2588 trans-hexaprenyltranstransferase YP_003126590.1 8753182 D 485918 CDS YP_003126591.1 256425938 8363181 8754209..8755915 1 NC_013132.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 8755915 8363181 Cpin_6989 Chitinophaga pinensis DSM 2588 single-stranded-DNA-specific exonuclease RecJ YP_003126591.1 8754209 D 485918 CDS YP_003126592.1 256425939 8363182 complement(8755966..8756796) 1 NC_013132.1 PFAM: phospholipase/carboxylesterase; KEGG: rfr:Rfer_1105 phospholipase/carboxylesterase; phospholipase/carboxylesterase 8756796 8363182 Cpin_6990 Chitinophaga pinensis DSM 2588 phospholipase/carboxylesterase YP_003126592.1 8755966 R 485918 CDS YP_003126593.1 256425940 8363183 complement(8756867..8758702) 1 NC_013132.1 PFAM: heat shock protein Hsp90; ATP-binding region ATPase domain protein; KEGG: pca:Pcar_1764 heat shock protein 90; heat shock protein Hsp90 8758702 8363183 Cpin_6991 Chitinophaga pinensis DSM 2588 heat shock protein Hsp90 YP_003126593.1 8756867 R 485918 CDS YP_003126594.1 256425941 8363184 8759019..8762282 1 NC_013132.1 KEGG: mxa:MXAN_6674 lipoprotein; hypothetical protein 8762282 8363184 Cpin_6992 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126594.1 8759019 D 485918 CDS YP_003126595.1 256425942 8363185 8762414..8762764 1 NC_013132.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: sfu:Sfum_3188 ribosomal protein S6; 30S ribosomal protein S6 8762764 8363185 Cpin_6993 Chitinophaga pinensis DSM 2588 30S ribosomal protein S6 YP_003126595.1 8762414 D 485918 CDS YP_003126596.1 256425943 8363186 8762769..8763035 1 NC_013132.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: bsu:BSU40890 30S ribosomal protein S18; 30S ribosomal protein S18 8763035 8363186 Cpin_6994 Chitinophaga pinensis DSM 2588 30S ribosomal protein S18 YP_003126596.1 8762769 D 485918 CDS YP_003126597.1 256425944 8363187 8763097..8763543 1 NC_013132.1 TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: mxa:MXAN_5080 ribosomal protein L9; 50S ribosomal protein L9 8763543 8363187 Cpin_6995 Chitinophaga pinensis DSM 2588 50S ribosomal protein L9 YP_003126597.1 8763097 D 485918 CDS YP_003126598.1 256425945 8363188 8763627..8764367 1 NC_013132.1 KEGG: bra:BRADO2817 hypothetical protein; hypothetical protein 8764367 8363188 Cpin_6996 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126598.1 8763627 D 485918 CDS YP_003126599.1 256425946 8363189 complement(8764373..8765275) 1 NC_013132.1 KEGG: nar:Saro_1585 dienelactone hydrolase; dienelactone hydrolase 8765275 8363189 Cpin_6997 Chitinophaga pinensis DSM 2588 dienelactone hydrolase YP_003126599.1 8764373 R 485918 CDS YP_003126600.1 256425947 8363190 8765366..8765758 1 NC_013132.1 hypothetical protein 8765758 8363190 Cpin_6998 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126600.1 8765366 D 485918 CDS YP_003126601.1 256425948 8363191 complement(8765762..8766832) 1 NC_013132.1 PFAM: peptidase M19 renal dipeptidase; KEGG: atc:AGR_C_4575 membrane dipeptidase homolog; peptidase M19 8766832 8363191 Cpin_6999 Chitinophaga pinensis DSM 2588 peptidase M19 YP_003126601.1 8765762 R 485918 CDS YP_003126602.1 256425949 8363192 complement(8766853..8767959) 1 NC_013132.1 PFAM: alanine racemase; KEGG: sus:Acid_3139 amino acid aldolase or racemase- like protein; alanine racemase 8767959 8363192 Cpin_7000 Chitinophaga pinensis DSM 2588 alanine racemase YP_003126602.1 8766853 R 485918 CDS YP_003126603.1 256425950 8363193 complement(8768120..8768581) 1 NC_013132.1 PFAM: endoribonuclease L-PSP; KEGG: atc:AGR_L_3105 hypothetical protein; endoribonuclease L-PSP 8768581 8363193 Cpin_7001 Chitinophaga pinensis DSM 2588 endoribonuclease L-PSP YP_003126603.1 8768120 R 485918 CDS YP_003126604.1 256425951 8363194 complement(8768601..8769938) 1 NC_013132.1 TIGRFAM: gluconate transporter; PFAM: gluconate transporter; Citrate transporter; KEGG: sde:Sde_1892 high-affinity H+/gluconate symporter; gluconate transporter 8769938 8363194 Cpin_7002 Chitinophaga pinensis DSM 2588 gluconate transporter YP_003126604.1 8768601 R 485918 CDS YP_003126605.1 256425952 8363195 complement(8769970..8771241) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_4173 ABC transporter, permease protein; hypothetical protein 8771241 8363195 Cpin_7003 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126605.1 8769970 R 485918 CDS YP_003126606.1 256425953 8363196 8771297..8772310 1 NC_013132.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: dde:Dde_3654 LacI family transcription regulator; LacI family transcriptional regulator 8772310 8363196 Cpin_7004 Chitinophaga pinensis DSM 2588 LacI family transcriptional regulator YP_003126606.1 8771297 D 485918 CDS YP_003126607.1 256425954 8363197 8772391..8773437 1 NC_013132.1 PFAM: aminoglycoside phosphotransferase; KEGG: pha:PSHAa1968 hypothetical protein; aminoglycoside phosphotransferase 8773437 8363197 Cpin_7005 Chitinophaga pinensis DSM 2588 aminoglycoside phosphotransferase YP_003126607.1 8772391 D 485918 CDS YP_003126608.1 256425955 8363198 complement(8773532..8774905) 1 NC_013132.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: glo:Glov_3125 proton-translocating NADH- quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N 8774905 8363198 Cpin_7006 Chitinophaga pinensis DSM 2588 proton-translocating NADH-quinone oxidoreductase subunit N YP_003126608.1 8773532 R 485918 CDS YP_003126609.1 256425956 8363199 complement(8774933..8776369) 1 NC_013132.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); Tachykinin/Neurokinin; KEGG: AGAP012727-PA; proton-translocating NADH-quinone oxidoreductase subunit M 8776369 8363199 Cpin_7007 Chitinophaga pinensis DSM 2588 proton-translocating NADH-quinone oxidoreductase subunit M YP_003126609.1 8774933 R 485918 CDS YP_003126610.1 256425957 8363200 complement(8776417..8778321) 1 NC_013132.1 KEGG: glo:Glov_3127 proton-translocating NADH- quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 8778321 8363200 Cpin_7008 Chitinophaga pinensis DSM 2588 proton-translocating NADH-quinone oxidoreductase subunit L YP_003126610.1 8776417 R 485918 CDS YP_003126611.1 256425958 8363201 complement(8778372..8778689) 1 NC_013132.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gur:Gura_4234 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 8778689 8363201 Cpin_7009 Chitinophaga pinensis DSM 2588 NADH-ubiquinone oxidoreductase chain 4L YP_003126611.1 8778372 R 485918 CDS YP_003126612.1 256425959 8363202 complement(8778738..8779241) 1 NC_013132.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ank:AnaeK_4330 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 8779241 8363202 Cpin_7010 Chitinophaga pinensis DSM 2588 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_003126612.1 8778738 R 485918 CDS YP_003126613.1 256425960 8363203 complement(8779284..8779793) 1 NC_013132.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: nmu:Nmul_A1020 NADH dehydrogenase subunit I; NADH-quinone oxidoreductase subunit I 8779793 8363203 Cpin_7011 Chitinophaga pinensis DSM 2588 NADH-quinone oxidoreductase subunit I YP_003126613.1 8779284 R 485918 CDS YP_003126614.1 256425961 8363204 complement(8779818..8780855) 1 NC_013132.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: NADH dehydrogenase (quinone); K00337 NADH dehydrogenase I subunit H; NADH dehydrogenase (quinone) 8780855 8363204 Cpin_7012 Chitinophaga pinensis DSM 2588 NADH dehydrogenase (quinone) YP_003126614.1 8779818 R 485918 CDS YP_003126615.1 256425962 8363205 complement(8780894..8781982) 1 NC_013132.1 PFAM: ferredoxin; KEGG: noc:Noc_2559 NADH dehydrogenase subunit G; ferredoxin 8781982 8363205 Cpin_7013 Chitinophaga pinensis DSM 2588 ferredoxin YP_003126615.1 8780894 R 485918 CDS YP_003126616.1 256425963 8363206 complement(8782005..8783369) 1 NC_013132.1 KEGG: mgm:Mmc1_3630 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 8783369 8363206 Cpin_7014 Chitinophaga pinensis DSM 2588 NADH-quinone oxidoreductase subunit F YP_003126616.1 8782005 R 485918 CDS YP_003126617.1 256425964 8363207 complement(8783415..8783900) 1 NC_013132.1 KEGG: mgm:Mmc1_3631 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 8783900 8363207 Cpin_7015 Chitinophaga pinensis DSM 2588 NADH-quinone oxidoreductase subunit E YP_003126617.1 8783415 R 485918 CDS YP_003126618.1 256425965 8363208 complement(8783925..8785139) 1 NC_013132.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: bba:Bd3085 NADH dehydrogenase I,D subunit; NADH dehydrogenase (quinone) 8785139 8363208 Cpin_7016 Chitinophaga pinensis DSM 2588 NADH dehydrogenase (quinone) YP_003126618.1 8783925 R 485918 CDS YP_003126619.1 256425966 8363209 complement(8785158..8785679) 1 NC_013132.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: gsu:GSU0340 NADH dehydrogenase I, C subunit; NADH (or F420H2) dehydrogenase subunit C 8785679 8363209 Cpin_7017 Chitinophaga pinensis DSM 2588 NADH (or F420H2) dehydrogenase subunit C YP_003126619.1 8785158 R 485918 CDS YP_003126620.1 256425967 8363210 complement(8785755..8786318) 1 NC_013132.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 8786318 8363210 Cpin_7018 Chitinophaga pinensis DSM 2588 NADH dehydrogenase subunit B YP_003126620.1 8785755 R 485918 CDS YP_003126621.1 256425968 8363211 complement(8786416..8786808) 1 NC_013132.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mxa:MXAN_2734 NADH dehydrogenase I, A subunit; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 8786808 8363211 Cpin_7019 Chitinophaga pinensis DSM 2588 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_003126621.1 8786416 R 485918 CDS YP_003126622.1 256425969 8363212 8786838..8786966 1 NC_013132.1 hypothetical protein 8786966 8363212 Cpin_7020 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126622.1 8786838 D 485918 CDS YP_003126623.1 256425970 8363213 complement(8786971..8788686) 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: SLEI family protein; hypothetical protein 8788686 8363213 Cpin_7021 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126623.1 8786971 R 485918 CDS YP_003126624.1 256425971 8363214 complement(8788725..8789648) 1 NC_013132.1 KEGG: acp:A2cp1_4148 phosphate binding protein; phosphate ABC transporter substrate-binding protein 8789648 8363214 Cpin_7022 Chitinophaga pinensis DSM 2588 phosphate ABC transporter substrate-binding protein YP_003126624.1 8788725 R 485918 CDS YP_003126625.1 256425972 8363215 complement(8789664..8789903) 1 NC_013132.1 hypothetical protein 8789903 8363215 Cpin_7023 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126625.1 8789664 R 485918 CDS YP_003126626.1 256425973 8363216 complement(8789920..8790051) 1 NC_013132.1 hypothetical protein 8790051 8363216 Cpin_7024 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126626.1 8789920 R 485918 CDS YP_003126627.1 256425974 8363217 8790349..8790774 1 NC_013132.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: mpo:Mpop_4997 protein tyrosine phosphatase; protein tyrosine phosphatase 8790774 8363217 Cpin_7025 Chitinophaga pinensis DSM 2588 protein tyrosine phosphatase YP_003126627.1 8790349 D 485918 CDS YP_003126628.1 256425975 8363218 8790800..8792149 1 NC_013132.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 8792149 hisS 8363218 hisS Chitinophaga pinensis DSM 2588 histidyl-tRNA synthetase YP_003126628.1 8790800 D 485918 CDS YP_003126629.1 256425976 8363219 complement(8792249..8792455) 1 NC_013132.1 hypothetical protein 8792455 8363219 Cpin_7027 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126629.1 8792249 R 485918 CDS YP_003126630.1 256425977 8363220 complement(8792460..8793017) 1 NC_013132.1 hypothetical protein 8793017 8363220 Cpin_7028 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126630.1 8792460 R 485918 CDS YP_003126631.1 256425978 8363221 complement(8793255..8795231) 1 NC_013132.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: sus:Acid_6757 redoxin domain-containing protein; cytochrome C biogenesis protein transmembrane region 8795231 8363221 Cpin_7029 Chitinophaga pinensis DSM 2588 cytochrome C biogenesis protein transmembrane region YP_003126631.1 8793255 R 485918 CDS YP_003126632.1 256425979 8363222 complement(8795348..8795803) 1 NC_013132.1 KEGG: sus:Acid_6757 redoxin domain-containing protein; hypothetical protein 8795803 8363222 Cpin_7030 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126632.1 8795348 R 485918 CDS YP_003126633.1 256425980 8363223 complement(8795873..8796565) 1 NC_013132.1 KEGG: sus:Acid_5943 phosphoribosylformylglycinamidine synthase subunit I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; phosphoribosylformylglycinamidine synthase I 8796565 8363223 Cpin_7031 Chitinophaga pinensis DSM 2588 phosphoribosylformylglycinamidine synthase I YP_003126633.1 8795873 R 485918 CDS YP_003126634.1 256425981 8363224 complement(8796732..8797664) 1 NC_013132.1 hypothetical protein 8797664 8363224 Cpin_7032 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126634.1 8796732 R 485918 CDS YP_003126635.1 256425982 8363225 complement(8798199..8798834) 1 NC_013132.1 hypothetical protein 8798834 8363225 Cpin_7033 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126635.1 8798199 R 485918 CDS YP_003126636.1 256425983 8363226 complement(8798862..8799449) 1 NC_013132.1 PFAM: cyclic nucleotide-binding; KEGG: bcb:BCB4264_A1286 cyclic nucleotide binding regulatory protein; Crp/Fnr family transcriptional regulator 8799449 8363226 Cpin_7034 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003126636.1 8798862 R 485918 CDS YP_003126637.1 256425984 8363227 complement(8799449..8800603) 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 8800603 8363227 Cpin_7035 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126637.1 8799449 R 485918 CDS YP_003126638.1 256425985 8363228 complement(8800672..8801301) 1 NC_013132.1 KEGG: scl:sce6176 methylpurine-DNA glycosylase family protein; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); DNA-3-methyladenine glycosylase 8801301 8363228 Cpin_7036 Chitinophaga pinensis DSM 2588 DNA-3-methyladenine glycosylase YP_003126638.1 8800672 R 485918 CDS YP_003126639.1 256425986 8363229 complement(8801322..8801888) 1 NC_013132.1 hypothetical protein 8801888 8363229 Cpin_7037 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126639.1 8801322 R 485918 CDS YP_003126640.1 256425987 8363230 complement(8801978..8804749) 1 NC_013132.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: sus:Acid_7828 peptidase M14, carboxypeptidase A; peptidase M14 carboxypeptidase A 8804749 8363230 Cpin_7038 Chitinophaga pinensis DSM 2588 peptidase M14 carboxypeptidase A YP_003126640.1 8801978 R 485918 CDS YP_003126641.1 256425988 8363231 complement(8804755..8806200) 1 NC_013132.1 TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: cak:Caul_2651 amidohydrolase; amidohydrolase 8806200 8363231 Cpin_7039 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003126641.1 8804755 R 485918 CDS YP_003126642.1 256425989 8363232 complement(8806197..8808929) 1 NC_013132.1 KEGG: sus:Acid_7828 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 8808929 8363232 Cpin_7040 Chitinophaga pinensis DSM 2588 peptidase M14, carboxypeptidase A YP_003126642.1 8806197 R 485918 CDS YP_003126643.1 256425990 8363233 complement(8808939..8809559) 1 NC_013132.1 hypothetical protein 8809559 8363233 Cpin_7041 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126643.1 8808939 R 485918 CDS YP_003126644.1 256425991 8363234 complement(8809582..8811192) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8811192 8363234 Cpin_7042 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126644.1 8809582 R 485918 CDS YP_003126645.1 256425992 8363235 complement(8811225..8814794) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor plug 8814794 8363235 Cpin_7043 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126645.1 8811225 R 485918 CDS YP_003126646.1 256425993 8363236 complement(8814997..8815962) 1 NC_013132.1 PFAM: FecR protein; KEGG: abu:Abu_1429 sigma factor regulatory protein FecR/PupR family; anti-FecI sigma factor FecR 8815962 8363236 Cpin_7044 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126646.1 8814997 R 485918 CDS YP_003126647.1 256425994 8363237 complement(8816059..8816565) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mms:mma_2027 ECF subfamily RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 8816565 8363237 Cpin_7045 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126647.1 8816059 R 485918 CDS YP_003126648.1 256425995 8363238 complement(8816863..8818371) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8818371 8363238 Cpin_7046 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126648.1 8816863 R 485918 CDS YP_003126649.1 256425996 8363239 8818579..8819508 1 NC_013132.1 PFAM: domain of unknown function DUF1731; dTDP-4- dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: pmr:PMI1781 cell division inhibitor, NAD(P)- binding; hypothetical protein 8819508 8363239 Cpin_7047 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126649.1 8818579 D 485918 CDS YP_003126650.1 256425997 8363240 complement(8819524..8820762) 1 NC_013132.1 PFAM: chorismate binding-like; KEGG: son:SO_2221 para-aminobenzoate synthase component I; chorismate-binding protein 8820762 8363240 Cpin_7048 Chitinophaga pinensis DSM 2588 chorismate-binding protein YP_003126650.1 8819524 R 485918 CDS YP_003126651.1 256425998 8363241 complement(8820835..8821296) 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8821296 8363241 Cpin_7049 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126651.1 8820835 R 485918 CDS YP_003126652.1 256425999 8363242 complement(8821397..8822695) 1 NC_013132.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 8822695 8363242 Cpin_7050 Chitinophaga pinensis DSM 2588 adenylosuccinate synthetase YP_003126652.1 8821397 R 485918 CDS YP_003126653.1 256426000 8363243 complement(8823027..8825279) 1 NC_013132.1 KEGG: bcy:Bcer98_3123 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 8825279 8363243 Cpin_7051 Chitinophaga pinensis DSM 2588 (p)ppGpp synthetase I SpoT/RelA YP_003126653.1 8823027 R 485918 CDS YP_003126654.1 256426001 8363244 complement(8825334..8826059) 1 NC_013132.1 PFAM: phosphoesterase HXTX; KEGG: bca:BCE_1348 hypothetical protein; phosphoesterase HXTX 8826059 8363244 Cpin_7052 Chitinophaga pinensis DSM 2588 phosphoesterase HXTX YP_003126654.1 8825334 R 485918 CDS YP_003126655.1 256426002 8363245 complement(8826091..8826837) 1 NC_013132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_1342 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 8826837 8363245 Cpin_7053 Chitinophaga pinensis DSM 2588 winged helix family two component transcriptional regulator YP_003126655.1 8826091 R 485918 CDS YP_003126656.1 256426003 8363246 complement(8827117..8828574) 1 NC_013132.1 PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: sus:Acid_4210 alpha-L-fucosidase; alpha-L-fucosidase 8828574 8363246 Cpin_7054 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003126656.1 8827117 R 485918 CDS YP_003126657.1 256426004 8363247 complement(8828577..8831105) 1 NC_013132.1 PFAM: glycoside hydrolase family 2 sugar binding; KEGG: pat:Patl_0128 glycoside hydrolase family protein; glycoside hydrolase 8831105 8363247 Cpin_7055 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003126657.1 8828577 R 485918 CDS YP_003126658.1 256426005 8363248 8831196..8831369 1 NC_013132.1 hypothetical protein 8831369 8363248 Cpin_7056 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126658.1 8831196 D 485918 CDS YP_003126659.1 256426006 8363249 complement(8831407..8832510) 1 NC_013132.1 KEGG: sat:SYN_01565 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 8832510 8363249 Cpin_7057 Chitinophaga pinensis DSM 2588 lipid-A-disaccharide synthase YP_003126659.1 8831407 R 485918 CDS YP_003126660.1 256426007 8363250 complement(8832920..8833225) 1 NC_013132.1 hypothetical protein 8833225 8363250 Cpin_7058 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126660.1 8832920 R 485918 CDS YP_003126661.1 256426008 8363251 complement(8833257..8834036) 1 NC_013132.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 8834036 surE 8363251 surE Chitinophaga pinensis DSM 2588 stationary phase survival protein SurE YP_003126661.1 8833257 R 485918 CDS YP_003126662.1 256426009 8363252 complement(8834205..8834987) 1 NC_013132.1 KEGG: bha:BH0450 hypothetical protein; hypothetical protein 8834987 8363252 Cpin_7060 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126662.1 8834205 R 485918 CDS YP_003126663.1 256426010 8363253 complement(8835008..8835901) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hypothetical protein; K01990 ABC-2 type transport system ATP-binding protein; ABC transporter 8835901 8363253 Cpin_7061 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126663.1 8835008 R 485918 CDS YP_003126664.1 256426011 8363254 complement(8835910..8838309) 1 NC_013132.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bcr:BCAH187_A5156 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 8838309 8363254 Cpin_7062 Chitinophaga pinensis DSM 2588 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_003126664.1 8835910 R 485918 CDS YP_003126665.1 256426012 8363255 complement(8838479..8839711) 1 NC_013132.1 KEGG: pen:PSEEN1028 sulfite reductase flavoprotein alpha-component; iron-regulated membrane protein; hypothetical protein 8839711 8363255 Cpin_7063 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126665.1 8838479 R 485918 CDS YP_003126666.1 256426013 8363256 8839952..8840512 1 NC_013132.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gur:Gura_3598 death-on-curing family protein; filamentation induced by cAMP protein fic 8840512 8363256 Cpin_7064 Chitinophaga pinensis DSM 2588 filamentation induced by cAMP protein fic YP_003126666.1 8839952 D 485918 CDS YP_003126667.1 256426014 8363257 complement(8840546..8840941) 1 NC_013132.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: sfu:Sfum_2439 GreA/GreB family elongation factor; GreA/GreB family elongation factor 8840941 8363257 Cpin_7065 Chitinophaga pinensis DSM 2588 GreA/GreB family elongation factor YP_003126667.1 8840546 R 485918 CDS YP_003126668.1 256426015 8363258 complement(8841415..8843496) 1 NC_013132.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 8843496 metG 8363258 metG Chitinophaga pinensis DSM 2588 methionyl-tRNA synthetase YP_003126668.1 8841415 R 485918 CDS YP_003126669.1 256426016 8363259 8843633..8844544 1 NC_013132.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: ank:AnaeK_3478 peptidase U61 LD- carboxypeptidase A; peptidase U61 LD-carboxypeptidase A 8844544 8363259 Cpin_7067 Chitinophaga pinensis DSM 2588 peptidase U61 LD-carboxypeptidase A YP_003126669.1 8843633 D 485918 CDS YP_003126670.1 256426017 8363260 complement(8844524..8845327) 1 NC_013132.1 KEGG: noc:Noc_2990 hypothetical protein; hypothetical protein 8845327 8363260 Cpin_7068 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126670.1 8844524 R 485918 CDS YP_003126671.1 256426018 8363261 complement(8845337..8846149) 1 NC_013132.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ypb:YPTS_0585 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 8846149 8363261 Cpin_7069 Chitinophaga pinensis DSM 2588 UBA/THIF-type NAD/FAD binding protein YP_003126671.1 8845337 R 485918 CDS YP_003126672.1 256426019 8363262 complement(8846258..8847628) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcz:BCZK4329 phosphate regulon sensor protein; histidine kinase 8847628 8363262 Cpin_7070 Chitinophaga pinensis DSM 2588 histidine kinase YP_003126672.1 8846258 R 485918 CDS YP_003126673.1 256426020 8363263 8848152..8848706 1 NC_013132.1 PFAM: protein of unknown function DUF179; KEGG: mgm:Mmc1_0726 protein of unknown function DUF179; hypothetical protein 8848706 8363263 Cpin_7071 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126673.1 8848152 D 485918 CDS YP_003126674.1 256426021 8363264 complement(8849679..8849930) 1 NC_013132.1 PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: ccs:CCNA_03558 ATP synthase subunit epsilon; H+transporting two-sector ATPase aubunit delta/epsilon 8849930 8363264 Cpin_7072 Chitinophaga pinensis DSM 2588 H+transporting two-sector ATPase aubunit delta/epsilon YP_003126674.1 8849679 R 485918 CDS YP_003126675.1 256426022 8363265 complement(8849955..8851457) 1 NC_013132.1 KEGG: sal:Sala_2288 F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; ATP synthase F1 subunit beta 8851457 8363265 Cpin_7073 Chitinophaga pinensis DSM 2588 ATP synthase F1 subunit beta YP_003126675.1 8849955 R 485918 CDS YP_003126676.1 256426023 8363266 8852084..8853556 1 NC_013132.1 KEGG: ade:Adeh_1548 hypothetical protein; hypothetical protein 8853556 8363266 Cpin_7074 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126676.1 8852084 D 485918 CDS YP_003126677.1 256426024 8363267 complement(8853560..8854081) 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_0769 acetyltransferase; N-acetyltransferase GCN5 8854081 8363267 Cpin_7075 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003126677.1 8853560 R 485918 CDS YP_003126678.1 256426025 8363268 complement(8854264..8854809) 1 NC_013132.1 KEGG: FAP157; flagellar associated protein; hypothetical protein 8854809 8363268 Cpin_7076 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126678.1 8854264 R 485918 CDS YP_003126679.1 256426026 8363269 8854832..8854963 1 NC_013132.1 hypothetical protein 8854963 8363269 Cpin_7077 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126679.1 8854832 D 485918 CDS YP_003126680.1 256426027 8363270 complement(8854904..8856379) 1 NC_013132.1 KEGG: pau:PA14_60770 outer membrane protein; outer membrane protein 8856379 8363270 Cpin_7078 Chitinophaga pinensis DSM 2588 outer membrane protein YP_003126680.1 8854904 R 485918 CDS YP_003126681.1 256426028 8363271 complement(8856372..8857730) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: sus:Acid_4101 hypothetical protein; hypothetical protein 8857730 8363271 Cpin_7079 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126681.1 8856372 R 485918 CDS YP_003126682.1 256426029 8363272 complement(8857735..8858985) 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: swp:swp_2894 membrane-fusion protein; RND family efflux transporter MFP subunit 8858985 8363272 Cpin_7080 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003126682.1 8857735 R 485918 CDS YP_003126683.1 256426030 8363273 8859191..8860360 1 NC_013132.1 KEGG: mxa:MXAN_3747 hypothetical protein; hypothetical protein 8860360 8363273 Cpin_7081 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126683.1 8859191 D 485918 CDS YP_003126684.1 256426031 8363274 complement(8860517..8861902) 1 NC_013132.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: reu:Reut_B5346 PAS; histidine kinase 8861902 8363274 Cpin_7082 Chitinophaga pinensis DSM 2588 histidine kinase YP_003126684.1 8860517 R 485918 CDS YP_003126685.1 256426032 8363275 8862127..8864268 1 NC_013132.1 KEGG: hch:HCH_01836 heat shock protein HtpX; Zn-dependent protease 8864268 8363275 Cpin_7083 Chitinophaga pinensis DSM 2588 Zn-dependent protease YP_003126685.1 8862127 D 485918 CDS YP_003126686.1 256426033 8363276 8864391..8866295 1 NC_013132.1 KEGG: dal:Dalk_1998 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 8866295 8363276 Cpin_7084 Chitinophaga pinensis DSM 2588 DNA polymerase III subunits gamma and tau YP_003126686.1 8864391 D 485918 CDS YP_003126687.1 256426034 8363277 8866381..8868021 1 NC_013132.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: mxa:MXAN_2668 pyruvate dehydrogenase complex , E2 component, dihydrolipoamide acetyltransferase; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 8868021 8363277 Cpin_7085 Chitinophaga pinensis DSM 2588 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_003126687.1 8866381 D 485918 CDS YP_003126688.1 256426035 8363278 8868185..8868574 1 NC_013132.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acp:A2cp1_4043 glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 8868574 8363278 Cpin_7086 Chitinophaga pinensis DSM 2588 bleomycin resistance protein YP_003126688.1 8868185 D 485918 CDS YP_003126689.1 256426036 8363279 complement(8868688..8868924) 1 NC_013132.1 hypothetical protein 8868924 8363279 Cpin_7087 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126689.1 8868688 R 485918 CDS YP_003126690.1 256426037 8363280 8868962..8869468 1 NC_013132.1 KEGG: mpo:Mpop_2992 conserved hypothetical protein; transcriptional regulatory protein; transcriptional regulator 8869468 8363280 Cpin_7088 Chitinophaga pinensis DSM 2588 transcriptional regulator YP_003126690.1 8868962 D 485918 CDS YP_003126691.1 256426038 8363281 8869533..8870477 1 NC_013132.1 PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: bha:BH3889 cell-division inhibitor; hypothetical protein 8870477 8363281 Cpin_7089 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126691.1 8869533 D 485918 CDS YP_003126692.1 256426039 8363282 8870563..8870931 1 NC_013132.1 KEGG: tgr:Tgr7_0019 hypothetical protein; hypothetical protein 8870931 8363282 Cpin_7090 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126692.1 8870563 D 485918 CDS YP_003126693.1 256426040 8363283 8871208..8871681 1 NC_013132.1 PFAM: protein of unknown function DUF458; KEGG: bsu:BSU14110 hypothetical protein; hypothetical protein 8871681 8363283 Cpin_7091 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126693.1 8871208 D 485918 CDS YP_003126694.1 256426041 8363284 8871718..8872230 1 NC_013132.1 hypothetical protein 8872230 8363284 Cpin_7092 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126694.1 8871718 D 485918 CDS YP_003126695.1 256426042 8363285 complement(8872247..8872855) 1 NC_013132.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: hypothetical protein; K03978 GTP-binding protein; small GTP-binding protein 8872855 8363285 Cpin_7093 Chitinophaga pinensis DSM 2588 small GTP-binding protein YP_003126695.1 8872247 R 485918 CDS YP_003126696.1 256426043 8363286 8872976..8873710 1 NC_013132.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: gsu:GSU0867 ubiquinone/menaquinone biosynthesis methyltransferase UbiE; ubiquinone/menaquinone biosynthesis methyltransferase 8873710 8363286 Cpin_7094 Chitinophaga pinensis DSM 2588 ubiquinone/menaquinone biosynthesis methyltransferase YP_003126696.1 8872976 D 485918 CDS YP_003126697.1 256426044 8363287 8873734..8874384 1 NC_013132.1 hypothetical protein 8874384 8363287 Cpin_7095 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126697.1 8873734 D 485918 CDS YP_003126698.1 256426045 8363288 8874404..8875750 1 NC_013132.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 8875750 8363288 Cpin_7096 Chitinophaga pinensis DSM 2588 dihydroorotase YP_003126698.1 8874404 D 485918 CDS YP_003126699.1 256426046 8363289 8875931..8877262 1 NC_013132.1 PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; KEGG: GJ18185 gene product from transcript GJ18185- RA; DNA mismatch repair protein MutS domain-containing protein 8877262 8363289 Cpin_7097 Chitinophaga pinensis DSM 2588 DNA mismatch repair protein MutS domain-containing protein YP_003126699.1 8875931 D 485918 CDS YP_003126700.1 256426047 8363290 complement(8877376..8877834) 1 NC_013132.1 hypothetical protein 8877834 8363290 Cpin_7098 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126700.1 8877376 R 485918 CDS YP_003126701.1 256426048 8363291 complement(8877831..8882273) 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 8882273 8363291 Cpin_7099 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126701.1 8877831 R 485918 CDS YP_003126702.1 256426049 8363292 complement(8882282..8885479) 1 NC_013132.1 TIGRFAM: hypothetical protein; KEGG: hypothetical protein; hypothetical protein 8885479 8363292 Cpin_7100 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126702.1 8882282 R 485918 CDS YP_003126703.1 256426050 8363293 8885900..8887444 1 NC_013132.1 KEGG: gur:Gura_4031 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA 8887444 8363293 Cpin_7101 Chitinophaga pinensis DSM 2588 ATPase AAA YP_003126703.1 8885900 D 485918 CDS YP_003126704.1 256426051 8363294 complement(8887510..8889642) 1 NC_013132.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 8889642 8363294 Cpin_7102 Chitinophaga pinensis DSM 2588 elongation factor G YP_003126704.1 8887510 R 485918 CDS YP_003126705.1 256426052 8363295 8889861..8891618 1 NC_013132.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sus:Acid_4432 ABC transporter related; ABC transporter 8891618 8363295 Cpin_7103 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126705.1 8889861 D 485918 CDS YP_003126706.1 256426053 8363296 8891633..8892046 1 NC_013132.1 KEGG: sus:Acid_5657 hypothetical protein; hypothetical protein 8892046 8363296 Cpin_7104 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126706.1 8891633 D 485918 CDS YP_003126707.1 256426054 8363297 8892141..8892626 1 NC_013132.1 KEGG: pfl:PFL_6100 lipoprotein; hypothetical protein 8892626 8363297 Cpin_7105 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126707.1 8892141 D 485918 CDS YP_003126708.1 256426055 8363298 complement(8892811..8895267) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: net:Neut_2038 TonB-dependent receptor; TonB-dependent receptor 8895267 8363298 Cpin_7106 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126708.1 8892811 R 485918 CDS YP_003126709.1 256426056 8363299 complement(8895372..8895875) 1 NC_013132.1 hypothetical protein 8895875 8363299 Cpin_7107 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126709.1 8895372 R 485918 CDS YP_003126710.1 256426057 8363300 complement(8895891..8897465) 1 NC_013132.1 PFAM: protein of unknown function DUF1501; KEGG: bmj:BMULJ_01910 hypothetical protein; hypothetical protein 8897465 8363300 Cpin_7108 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126710.1 8895891 R 485918 CDS YP_003126711.1 256426058 8363301 complement(8897487..8899133) 1 NC_013132.1 PFAM: Protein of unknown function DUF1800; KEGG: bmj:BMULJ_01911 hypothetical protein; hypothetical protein 8899133 8363301 Cpin_7109 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126711.1 8897487 R 485918 CDS YP_003126712.1 256426059 8363302 complement(8899339..8900514) 1 NC_013132.1 KEGG: aba:Acid345_2470 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 8900514 8363302 Cpin_7110 Chitinophaga pinensis DSM 2588 acetyl-CoA acetyltransferase YP_003126712.1 8899339 R 485918 CDS YP_003126713.1 256426060 8363304 8900866..8902017 1 NC_013132.1 PFAM: acyltransferase 3; KEGG: rpt:Rpal_2446 acyltransferase 3; acyltransferase 3 8902017 8363304 Cpin_7111 Chitinophaga pinensis DSM 2588 acyltransferase 3 YP_003126713.1 8900866 D 485918 CDS YP_003126714.1 256426061 8363305 8902264..8903838 1 NC_013132.1 hypothetical protein 8903838 8363305 Cpin_7112 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126714.1 8902264 D 485918 CDS YP_003126715.1 256426062 8363306 complement(8903999..8904568) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; K03564 peroxiredoxin Q/BCP; alkyl hydroperoxide reductase 8904568 8363306 Cpin_7113 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003126715.1 8903999 R 485918 CDS YP_003126716.1 256426063 8363307 8904710..8904811 1 NC_013132.1 hypothetical protein 8904811 8363307 Cpin_7114 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126716.1 8904710 D 485918 CDS YP_003126717.1 256426064 8363308 8904820..8906796 1 NC_013132.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: sus:Acid_6757 redoxin domain-containing protein; protein-disulfide reductase 8906796 8363308 Cpin_7115 Chitinophaga pinensis DSM 2588 protein-disulfide reductase YP_003126717.1 8904820 D 485918 CDS YP_003126718.1 256426065 8363309 8906805..8907290 1 NC_013132.1 PFAM: thioredoxin domain protein; KEGG: AGAP012940-PA; thioredoxin domain-containing protein 8907290 8363309 Cpin_7116 Chitinophaga pinensis DSM 2588 thioredoxin domain-containing protein YP_003126718.1 8906805 D 485918 CDS YP_003126719.1 256426066 8363310 8907295..8907909 1 NC_013132.1 KEGG: amc:MADE_03638 peptide methionine sulfoxide reductase MsrA; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 8907909 8363310 Cpin_7117 Chitinophaga pinensis DSM 2588 peptide methionine sulfoxide reductase YP_003126719.1 8907295 D 485918 CDS YP_003126720.1 256426067 8363311 8907906..8908421 1 NC_013132.1 KEGG: nha:Nham_1128 methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 8908421 8363311 Cpin_7118 Chitinophaga pinensis DSM 2588 methionine-R-sulfoxide reductase YP_003126720.1 8907906 D 485918 CDS YP_003126721.1 256426068 8363312 8908526..8909116 1 NC_013132.1 KEGG: bcn:Bcen_6458 hypothetical protein; hypothetical protein 8909116 8363312 Cpin_7119 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126721.1 8908526 D 485918 CDS YP_003126722.1 256426069 8363313 8909362..8910360 1 NC_013132.1 hypothetical protein 8910360 8363313 Cpin_7120 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126722.1 8909362 D 485918 CDS YP_003126723.1 256426070 8363314 complement(8910598..8911581) 1 NC_013132.1 KEGG: bba:Bd0373 hypothetical protein; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 8911581 8363314 Cpin_7121 Chitinophaga pinensis DSM 2588 thioredoxin reductase YP_003126723.1 8910598 R 485918 CDS YP_003126724.1 256426071 8363315 complement(8911571..8912086) 1 NC_013132.1 PFAM: OsmC family protein; KEGG: xcv:XCV3060 OsmC-like protein; OsmC family protein 8912086 8363315 Cpin_7122 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003126724.1 8911571 R 485918 CDS YP_003126725.1 256426072 8363316 8912207..8912785 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: acp:A2cp1_4049 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 8912785 8363316 Cpin_7123 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003126725.1 8912207 D 485918 CDS YP_003126726.1 256426073 8363317 complement(8912833..8914236) 1 NC_013132.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: acr:Acry_1621 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 8914236 8363317 Cpin_7124 Chitinophaga pinensis DSM 2588 dihydrolipoamide dehydrogenase YP_003126726.1 8912833 R 485918 CDS YP_003126727.1 256426074 8363318 8914419..8915438 1 NC_013132.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: fph:Fphi_0104 threonine aldolase; threonine aldolase 8915438 8363318 Cpin_7125 Chitinophaga pinensis DSM 2588 threonine aldolase YP_003126727.1 8914419 D 485918 CDS YP_003126728.1 256426075 8363319 8915502..8916368 1 NC_013132.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: nma:NMA1460 integral membrane protein; hypothetical protein 8916368 8363319 Cpin_7126 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126728.1 8915502 D 485918 CDS YP_003126729.1 256426076 8363320 8916589..8917800 1 NC_013132.1 KEGG: dac:Daci_5718 peptidase S1 and S6 chymotrypsin/Hap; hypothetical protein 8917800 8363320 Cpin_7127 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126729.1 8916589 D 485918 CDS YP_003126730.1 256426077 8363321 8917864..8918973 1 NC_013132.1 KEGG: hypothetical protein; hypothetical protein 8918973 8363321 Cpin_7128 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126730.1 8917864 D 485918 CDS YP_003126731.1 256426078 8363322 8919168..8919677 1 NC_013132.1 KEGG: YALI0C08415p; hypothetical protein 8919677 8363322 Cpin_7129 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126731.1 8919168 D 485918 CDS YP_003126732.1 256426079 8363323 8919823..8921160 1 NC_013132.1 metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; deaminase 8921160 8363323 Cpin_7130 Chitinophaga pinensis DSM 2588 deaminase YP_003126732.1 8919823 D 485918 CDS YP_003126733.1 256426080 8363324 8921316..8922167 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bba:Bd2916 transcriptional regulator; AraC family transcriptional regulator 8922167 8363324 Cpin_7131 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126733.1 8921316 D 485918 CDS YP_003126734.1 256426081 8363325 8922288..8922452 1 NC_013132.1 hypothetical protein 8922452 8363325 Cpin_7132 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126734.1 8922288 D 485918 CDS YP_003126735.1 256426082 8363327 8922660..8922767 1 NC_013132.1 hypothetical protein 8922767 8363327 Cpin_7133 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126735.1 8922660 D 485918 CDS YP_003126736.1 256426083 8363328 8922955..8923479 1 NC_013132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BSU12040 hypothetical protein; N-acetyltransferase GCN5 8923479 8363328 Cpin_7134 Chitinophaga pinensis DSM 2588 N-acetyltransferase GCN5 YP_003126736.1 8922955 D 485918 CDS YP_003126737.1 256426084 8363329 complement(8923543..8924139) 1 NC_013132.1 hypothetical protein 8924139 8363329 Cpin_7135 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126737.1 8923543 R 485918 CDS YP_003126738.1 256426085 8363330 complement(8924145..8924633) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: xcb:XC_1474 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 8924633 8363330 Cpin_7136 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126738.1 8924145 R 485918 CDS YP_003126739.1 256426086 8363331 8925219..8925950 1 NC_013132.1 hypothetical protein 8925950 8363331 Cpin_7137 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126739.1 8925219 D 485918 CDS YP_003126740.1 256426087 8363332 8926071..8926787 1 NC_013132.1 hypothetical protein 8926787 8363332 Cpin_7138 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126740.1 8926071 D 485918 CDS YP_003126741.1 256426088 8363333 8926897..8927223 1 NC_013132.1 KEGG: eca:ECA3657 hypothetical protein; hypothetical protein 8927223 8363333 Cpin_7139 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126741.1 8926897 D 485918 CDS YP_003126742.1 256426089 8363334 complement(8927231..8928508) 1 NC_013132.1 PFAM: alpha/beta hydrolase; KEGG: bbt:BBta_2505 alpha/beta family hydrolase; alpha/beta hydrolase 8928508 8363334 Cpin_7140 Chitinophaga pinensis DSM 2588 alpha/beta hydrolase YP_003126742.1 8927231 R 485918 CDS YP_003126743.1 256426090 8363335 8928677..8930062 1 NC_013132.1 PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein; KWG repeat-containing protein 8930062 8363335 Cpin_7141 Chitinophaga pinensis DSM 2588 KWG repeat-containing protein YP_003126743.1 8928677 D 485918 CDS YP_003126744.1 256426091 8363336 complement(8930082..8931668) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hne:HNE_0950 ABC transporter, ATP-binding protein; ABC transporter 8931668 8363336 Cpin_7142 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126744.1 8930082 R 485918 CDS YP_003126745.1 256426092 8363337 8931694..8931837 1 NC_013132.1 hypothetical protein 8931837 8363337 Cpin_7143 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126745.1 8931694 D 485918 CDS YP_003126746.1 256426093 8363338 complement(8931909..8932370) 1 NC_013132.1 hypothetical protein 8932370 8363338 Cpin_7144 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126746.1 8931909 R 485918 CDS YP_003126747.1 256426094 8363339 complement(8932487..8932903) 1 NC_013132.1 PFAM: OsmC family protein; KEGG: gox:GOX1992 osmotically inducible protein C; OsmC family protein 8932903 8363339 Cpin_7145 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003126747.1 8932487 R 485918 CDS YP_003126748.1 256426095 8363340 complement(8933099..8933509) 1 NC_013132.1 PFAM: protein of unknown function DUF1348; KEGG: pat:Patl_1126 hypothetical protein; hypothetical protein 8933509 8363340 Cpin_7146 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126748.1 8933099 R 485918 CDS YP_003126749.1 256426096 8363341 complement(8933520..8934059) 1 NC_013132.1 PFAM: regulatory protein TetR; KEGG: scl:sce4859 TetR family transcriptional regulator; TetR family transcriptional regulator 8934059 8363341 Cpin_7147 Chitinophaga pinensis DSM 2588 TetR family transcriptional regulator YP_003126749.1 8933520 R 485918 CDS YP_003126750.1 256426097 8363342 8934223..8935176 1 NC_013132.1 KEGG: wol:WD0513 hypothetical protein; hypothetical protein 8935176 8363342 Cpin_7148 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126750.1 8934223 D 485918 CDS YP_003126751.1 256426098 8363343 8935304..8936620 1 NC_013132.1 KEGG: cps:CPS_2544 cytochrome P460; hypothetical protein 8936620 8363343 Cpin_7149 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126751.1 8935304 D 485918 CDS YP_003126752.1 256426099 8363344 8936633..8937670 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sdn:Sden_1210 histidine kinase internal region; signal transduction histidine kinase LytS 8937670 8363344 Cpin_7150 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003126752.1 8936633 D 485918 CDS YP_003126753.1 256426100 8363345 8937645..8938394 1 NC_013132.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: sdn:Sden_1209 LytTr DNA-binding region; LytTR family two component transcriptional regulator 8938394 8363345 Cpin_7151 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003126753.1 8937645 D 485918 CDS YP_003126754.1 256426101 8363346 8938482..8939357 1 NC_013132.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mmw:Mmwyl1_2547 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 8939357 8363346 Cpin_7152 Chitinophaga pinensis DSM 2588 6-phosphogluconate dehydrogenase YP_003126754.1 8938482 D 485918 CDS YP_003126755.1 256426102 8363347 8939679..8940581 1 NC_013132.1 KEGG: pol:Bpro_4930 hypothetical protein; hypothetical protein 8940581 8363347 Cpin_7153 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126755.1 8939679 D 485918 CDS YP_003126756.1 256426103 8363348 complement(8940731..8941774) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: aba:Acid345_4044 aldo/keto reductase; aldo/keto reductase 8941774 8363348 Cpin_7154 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003126756.1 8940731 R 485918 CDS YP_003126757.1 256426104 8363349 8941994..8942290 1 NC_013132.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain protein; KEGG: hch:HCH_01313 thioredoxin; thioredoxin 8942290 8363349 Cpin_7155 Chitinophaga pinensis DSM 2588 thioredoxin YP_003126757.1 8941994 D 485918 CDS YP_003126758.1 256426105 8363350 8942383..8943180 1 NC_013132.1 KEGG: smt:Smal_0362 hypothetical protein; hypothetical protein 8943180 8363350 Cpin_7156 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126758.1 8942383 D 485918 CDS YP_003126759.1 256426106 8363351 8943281..8944156 1 NC_013132.1 PFAM: lipase class 3; KEGG: bcr:BCAH187_A5004 lipase family protein; lipase class 3 8944156 8363351 Cpin_7157 Chitinophaga pinensis DSM 2588 lipase class 3 YP_003126759.1 8943281 D 485918 CDS YP_003126760.1 256426107 8363352 complement(8944303..8944839) 1 NC_013132.1 TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase; KEGG: pol:Bpro_0515 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 8944839 8363352 Cpin_7158 Chitinophaga pinensis DSM 2588 alkylhydroperoxidase YP_003126760.1 8944303 R 485918 CDS YP_003126761.1 256426108 8363353 8945096..8946622 1 NC_013132.1 PFAM: TROVE domain protein; KEGG: aba:Acid345_2911 hypothetical protein; TROVE domain-containing protein 8946622 8363353 Cpin_7159 Chitinophaga pinensis DSM 2588 TROVE domain-containing protein YP_003126761.1 8945096 D 485918 CDS YP_003126762.1 256426109 8363354 8947528..8948292 1 NC_013132.1 hypothetical protein 8948292 8363354 Cpin_7160 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126762.1 8947528 D 485918 CDS YP_003126763.1 256426110 8363355 8948954..8949466 1 NC_013132.1 hypothetical protein 8949466 8363355 Cpin_7161 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126763.1 8948954 D 485918 CDS YP_003126764.1 256426111 8363356 complement(8949459..8949614) 1 NC_013132.1 hypothetical protein 8949614 8363356 Cpin_7162 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126764.1 8949459 R 485918 CDS YP_003126765.1 256426112 8363357 complement(8949686..8950930) 1 NC_013132.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: ppd:Ppro_2206 major facilitator transporter; major facilitator superfamily protein 8950930 8363357 Cpin_7163 Chitinophaga pinensis DSM 2588 major facilitator superfamily protein YP_003126765.1 8949686 R 485918 CDS YP_003126766.1 256426113 8363358 8951153..8951587 1 NC_013132.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmn:BMA10247_A0209 MarR family transcriptional regulator; MarR family transcriptional regulator 8951587 8363358 Cpin_7164 Chitinophaga pinensis DSM 2588 MarR family transcriptional regulator YP_003126766.1 8951153 D 485918 CDS YP_003126767.1 256426114 8363359 8951611..8952078 1 NC_013132.1 PFAM: OsmC family protein; KEGG: aba:Acid345_1947 hypothetical protein; OsmC family protein 8952078 8363359 Cpin_7165 Chitinophaga pinensis DSM 2588 OsmC family protein YP_003126767.1 8951611 D 485918 CDS YP_003126768.1 256426115 8363360 8952304..8952936 1 NC_013132.1 member of the NlpC/P60 superfamily of peptidases; peptidoglycan peptidase 8952936 8363360 Cpin_7166 Chitinophaga pinensis DSM 2588 peptidoglycan peptidase YP_003126768.1 8952304 D 485918 CDS YP_003126769.1 256426116 8363361 8953039..8954127 1 NC_013132.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: lpc:LPC_1993 methyltransferase; hypothetical protein 8954127 8363361 Cpin_7167 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126769.1 8953039 D 485918 CDS YP_003126770.1 256426117 8363362 complement(8954164..8954532) 1 NC_013132.1 hypothetical protein 8954532 8363362 Cpin_7168 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126770.1 8954164 R 485918 CDS YP_003126771.1 256426118 8363363 complement(8954909..8955835) 1 NC_013132.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: sal:Sala_1018 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 8955835 8363363 Cpin_7169 Chitinophaga pinensis DSM 2588 endonuclease/exonuclease/phosphatase YP_003126771.1 8954909 R 485918 CDS YP_003126772.1 256426119 8363365 8956969..8957481 1 NC_013132.1 PFAM: DinB family protein; KEGG: sus:Acid_5054 DinB; DinB family protein 8957481 8363365 Cpin_7171 Chitinophaga pinensis DSM 2588 DinB family protein YP_003126772.1 8956969 D 485918 CDS YP_003126773.1 256426120 8363366 8957484..8957579 1 NC_013132.1 hypothetical protein 8957579 8363366 Cpin_7172 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126773.1 8957484 D 485918 CDS YP_003126774.1 256426121 8363367 complement(8957589..8958977) 1 NC_013132.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: pca:Pcar_2631 von Willebrand factor type A domain-containing protein; von Willebrand factor type A 8958977 8363367 Cpin_7173 Chitinophaga pinensis DSM 2588 von Willebrand factor type A YP_003126774.1 8957589 R 485918 CDS YP_003126775.1 256426122 8363368 8959134..8960612 1 NC_013132.1 PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; KEGG: pat:Patl_2797 deoxyribodipyrimidine photolyase-related protein; deoxyribodipyrimidine photolyase-like protein 8960612 8363368 Cpin_7174 Chitinophaga pinensis DSM 2588 deoxyribodipyrimidine photolyase-like protein YP_003126775.1 8959134 D 485918 CDS YP_003126776.1 256426123 8363369 8960634..8961749 1 NC_013132.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: mlo:mll9709 DNA polymerase IV; DNA-directed DNA polymerase 8961749 8363369 Cpin_7175 Chitinophaga pinensis DSM 2588 DNA-directed DNA polymerase YP_003126776.1 8960634 D 485918 CDS YP_003126777.1 256426124 8363370 complement(8961881..8963512) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 8963512 8363370 Cpin_7176 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126777.1 8961881 R 485918 CDS YP_003126778.1 256426125 8363371 complement(8963534..8966449) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8966449 8363371 Cpin_7177 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126778.1 8963534 R 485918 CDS YP_003126779.1 256426126 8363372 complement(8966948..8967064) 1 NC_013132.1 hypothetical protein 8967064 8363372 Cpin_7178 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126779.1 8966948 R 485918 CDS YP_003126780.1 256426127 8363373 complement(8967167..8967664) 1 NC_013132.1 KEGG: aba:Acid345_1671 hypothetical protein; hypothetical protein 8967664 8363373 Cpin_7179 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126780.1 8967167 R 485918 CDS YP_003126781.1 256426128 8363374 complement(8967770..8968882) 1 NC_013132.1 KEGG: xcv:XCV3219 neuraminidase; neuraminidase 8968882 8363374 Cpin_7180 Chitinophaga pinensis DSM 2588 neuraminidase YP_003126781.1 8967770 R 485918 CDS YP_003126782.1 256426129 8363375 complement(8968911..8970536) 1 NC_013132.1 hypothetical protein 8970536 8363375 Cpin_7181 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126782.1 8968911 R 485918 CDS YP_003126783.1 256426130 8363376 complement(8970572..8974132) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 8974132 8363376 Cpin_7182 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126783.1 8970572 R 485918 CDS YP_003126784.1 256426131 8363377 complement(8974511..8975641) 1 NC_013132.1 PFAM: FecR protein; KEGG: FecR protein; anti-FecI sigma factor FecR 8975641 8363377 Cpin_7183 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126784.1 8974511 R 485918 CDS YP_003126785.1 256426132 8363378 complement(8975655..8976293) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; regulatory protein LuxR; KEGG: abo:ABO_1639 RNA polymerase sigma factor RpoE; LuxR family transcriptional regulator 8976293 8363378 Cpin_7184 Chitinophaga pinensis DSM 2588 LuxR family transcriptional regulator YP_003126785.1 8975655 R 485918 CDS YP_003126786.1 256426133 8363379 complement(8976487..8976984) 1 NC_013132.1 PFAM: ferritin Dps family protein; KEGG: apl:APL_1069 ferritin-like protein 1; ferroxidase 8976984 8363379 Cpin_7185 Chitinophaga pinensis DSM 2588 ferroxidase YP_003126786.1 8976487 R 485918 CDS YP_003126787.1 256426134 8363380 complement(8977212..8977541) 1 NC_013132.1 PFAM: cupin; KEGG: asu:Asuc_1470 cupin 2 domain-containing protein; cupin 8977541 8363380 Cpin_7186 Chitinophaga pinensis DSM 2588 cupin YP_003126787.1 8977212 R 485918 CDS YP_003126788.1 256426135 8363381 complement(8977758..8978885) 1 NC_013132.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hypothetical protein; alkyl hydroperoxide reductase 8978885 8363381 Cpin_7187 Chitinophaga pinensis DSM 2588 alkyl hydroperoxide reductase YP_003126788.1 8977758 R 485918 CDS YP_003126789.1 256426136 8363382 complement(8979151..8980467) 1 NC_013132.1 TIGRFAM: sugar transporter; PFAM: ABC transporter substrate-binding protein; major facilitator superfamily MFS_1; KEGG: sus:Acid_5028 sugar transporter; sugar transporter 8980467 8363382 Cpin_7188 Chitinophaga pinensis DSM 2588 sugar transporter YP_003126789.1 8979151 R 485918 CDS YP_003126790.1 256426137 8363383 8981156..8981935 1 NC_013132.1 KEGG: bur:Bcep18194_B0526 hypothetical protein; hypothetical protein 8981935 8363383 Cpin_7189 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126790.1 8981156 D 485918 CDS YP_003126791.1 256426138 8363384 complement(8982066..8982983) 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: abb:ABBFA_000249 regulatory protein; AraC family transcriptional regulator 8982983 8363384 Cpin_7190 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126791.1 8982066 R 485918 CDS YP_003126792.1 256426139 8363385 complement(8983140..8983985) 1 NC_013132.1 PFAM: aldo/keto reductase; KEGG: aba:Acid345_2253 aldo/keto reductase; aldo/keto reductase 8983985 8363385 Cpin_7191 Chitinophaga pinensis DSM 2588 aldo/keto reductase YP_003126792.1 8983140 R 485918 CDS YP_003126793.1 256426140 8363386 complement(8984363..8986798) 1 NC_013132.1 KEGG: cja:CJA_3593 alpha-L-fucosidase, , afc95B; alpha-L-fucosidase 8986798 8363386 Cpin_7192 Chitinophaga pinensis DSM 2588 alpha-L-fucosidase YP_003126793.1 8984363 R 485918 CDS YP_003126794.1 256426141 8363387 complement(8987010..8988656) 1 NC_013132.1 PFAM: glycoside hydrolase family 39; KEGG: acr:Acry_3134 glycoside hydrolase family protein; glycoside hydrolase 8988656 8363387 Cpin_7193 Chitinophaga pinensis DSM 2588 glycoside hydrolase YP_003126794.1 8987010 R 485918 CDS YP_003126795.1 256426142 8363388 complement(8988989..8989285) 1 NC_013132.1 hypothetical protein 8989285 8363388 Cpin_7194 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126795.1 8988989 R 485918 CDS YP_003126796.1 256426143 8363389 8989389..8990333 1 NC_013132.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1106 AraC family transcriptional regulator; AraC family transcriptional regulator 8990333 8363389 Cpin_7195 Chitinophaga pinensis DSM 2588 AraC family transcriptional regulator YP_003126796.1 8989389 D 485918 CDS YP_003126797.1 256426144 8363390 complement(8990431..8990625) 1 NC_013132.1 hypothetical protein 8990625 8363390 Cpin_7196 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126797.1 8990431 R 485918 CDS YP_003126798.1 256426145 8363391 8990798..8992552 1 NC_013132.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pna:Pnap_0164 ABC transporter related; ABC transporter 8992552 8363391 Cpin_7197 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126798.1 8990798 D 485918 CDS YP_003126799.1 256426146 8363392 8992612..8993955 1 NC_013132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nmu:Nmul_A2001 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 8993955 8363392 Cpin_7198 Chitinophaga pinensis DSM 2588 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003126799.1 8992612 D 485918 CDS YP_003126800.1 256426147 8363393 8994140..8995567 1 NC_013132.1 PFAM: exonuclease VII large subunit; KEGG: pcr:Pcryo_1091 exodeoxyribonuclease VII large subunit; exodeoxyribonuclease VII 8995567 8363393 Cpin_7199 Chitinophaga pinensis DSM 2588 exodeoxyribonuclease VII YP_003126800.1 8994140 D 485918 CDS YP_003126801.1 256426148 8363394 8995557..8995763 1 NC_013132.1 PFAM: exonuclease VII small subunit; KEGG: scl:sce5400 exodeoxyribonuclease VII small subunit; exonuclease VII small subunit 8995763 8363394 Cpin_7200 Chitinophaga pinensis DSM 2588 exonuclease VII small subunit YP_003126801.1 8995557 D 485918 CDS YP_003126802.1 256426149 8363395 8995981..8997237 1 NC_013132.1 PFAM: outer membrane efflux protein; KEGG: aba:Acid345_0447 outer membrane efflux protein; outer membrane efflux protein 8997237 8363395 Cpin_7201 Chitinophaga pinensis DSM 2588 outer membrane efflux protein YP_003126802.1 8995981 D 485918 CDS YP_003126803.1 256426150 8363396 8997239..8998249 1 NC_013132.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sus:Acid_6454 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 8998249 8363396 Cpin_7202 Chitinophaga pinensis DSM 2588 RND family efflux transporter MFP subunit YP_003126803.1 8997239 D 485918 CDS YP_003126804.1 256426151 8363397 8998293..8998598 1 NC_013132.1 PFAM: protein of unknown function DUF190; KEGG: sus:Acid_6456 hypothetical protein; hypothetical protein 8998598 8363397 Cpin_7203 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126804.1 8998293 D 485918 CDS YP_003126805.1 256426152 8363398 8998622..9001777 1 NC_013132.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sus:Acid_6455 CzcA family heavy metal efflux protein; CzcA family heavy metal efflux pump 9001777 8363398 Cpin_7204 Chitinophaga pinensis DSM 2588 CzcA family heavy metal efflux pump YP_003126805.1 8998622 D 485918 CDS YP_003126806.1 256426153 8363399 complement(9001861..9002676) 1 NC_013132.1 hypothetical protein 9002676 8363399 Cpin_7205 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126806.1 9001861 R 485918 CDS YP_003126807.1 256426154 8363400 complement(9002753..9007252) 1 NC_013132.1 KEGG: dal:Dalk_5101 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; PAS fold-3 domain protein; CheB methylesterase; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; PAC repeat- containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein; signal transduction histidine kinase with CheB and CheR activity 9007252 8363400 Cpin_7206 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase with CheB and CheR activity YP_003126807.1 9002753 R 485918 CDS YP_003126808.1 256426155 8363401 complement(9007303..9008829) 1 NC_013132.1 PFAM: GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: GAF domain protein; KEGG: met:M446_2206 GAF sensor signal transduction histidine kinase; PAS/PAC sensor protein 9008829 8363401 Cpin_7207 Chitinophaga pinensis DSM 2588 PAS/PAC sensor protein YP_003126808.1 9007303 R 485918 CDS YP_003126809.1 256426156 8363402 complement(9008862..9009437) 1 NC_013132.1 PFAM: Haem oxygenase-like; KEGG: ppw:PputW619_1720 heme oxygenase; heme oxygenase-like protein 9009437 8363402 Cpin_7208 Chitinophaga pinensis DSM 2588 heme oxygenase-like protein YP_003126809.1 9008862 R 485918 CDS YP_003126810.1 256426157 8363403 complement(9009515..9009964) 1 NC_013132.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sfu:Sfum_2731 response regulator receiver protein; response regulator receiver protein 9009964 8363403 Cpin_7209 Chitinophaga pinensis DSM 2588 response regulator receiver protein YP_003126810.1 9009515 R 485918 CDS YP_003126811.1 256426158 8363404 complement(9010235..9011725) 1 NC_013132.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: scl:sce0169 peptidase; peptidase S41 9011725 8363404 Cpin_7210 Chitinophaga pinensis DSM 2588 peptidase S41 YP_003126811.1 9010235 R 485918 CDS YP_003126812.1 256426159 8363405 9012067..9013071 1 NC_013132.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mrd:Mrad2831_5128 glutamate--ammonia ligase; glutamate--ammonia ligase 9013071 8363405 Cpin_7211 Chitinophaga pinensis DSM 2588 glutamate--ammonia ligase YP_003126812.1 9012067 D 485918 CDS YP_003126813.1 256426160 8363406 complement(9013175..9013933) 1 NC_013132.1 KEGG: swd:Swoo_0198 hypothetical protein; hypothetical protein 9013933 8363406 Cpin_7212 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126813.1 9013175 R 485918 CDS YP_003126814.1 256426161 8363407 complement(9014052..9015020) 1 NC_013132.1 KEGG: rpd:RPD_3003 outer membrane autotransporter barrel; hypothetical protein 9015020 8363407 Cpin_7213 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126814.1 9014052 R 485918 CDS YP_003126815.1 256426162 8363408 complement(9015049..9015768) 1 NC_013132.1 hypothetical protein 9015768 8363408 Cpin_7214 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126815.1 9015049 R 485918 CDS YP_003126816.1 256426163 8363409 complement(9015791..9016579) 1 NC_013132.1 hypothetical protein 9016579 8363409 Cpin_7215 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126816.1 9015791 R 485918 CDS YP_003126817.1 256426164 8363410 complement(9016612..9017307) 1 NC_013132.1 hypothetical protein 9017307 8363410 Cpin_7216 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126817.1 9016612 R 485918 CDS YP_003126818.1 256426165 8363411 complement(9017316..9019439) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: prw:PsycPRwf_1506 TonB-dependent receptor; TonB-dependent receptor 9019439 8363411 Cpin_7217 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126818.1 9017316 R 485918 CDS YP_003126819.1 256426166 8363412 complement(9019778..9020788) 1 NC_013132.1 hypothetical protein 9020788 8363412 Cpin_7218 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126819.1 9019778 R 485918 CDS YP_003126820.1 256426167 8363413 complement(9020826..9022922) 1 NC_013132.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pca:Pcar_0195 outer membrane receptor for ferrienterochelin and colicins; TonB-dependent receptor 9022922 8363413 Cpin_7219 Chitinophaga pinensis DSM 2588 TonB-dependent receptor YP_003126820.1 9020826 R 485918 CDS YP_003126821.1 256426168 8363414 complement(9023169..9023486) 1 NC_013132.1 hypothetical protein 9023486 8363414 Cpin_7220 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126821.1 9023169 R 485918 CDS YP_003126822.1 256426169 8363415 complement(9023803..9024837) 1 NC_013132.1 PFAM: haemin-degrading protein; KEGG: mfa:Mfla_1604 hemin-degrading; hemin-degrading protein 9024837 8363415 Cpin_7221 Chitinophaga pinensis DSM 2588 hemin-degrading protein YP_003126822.1 9023803 R 485918 CDS YP_003126823.1 256426170 8363416 complement(9024842..9025690) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: asa:ASA_3336 ABC-type hemin transporter, ATP- binding protein; hemin ABC transporter ATP-binding protein 9025690 8363416 Cpin_7222 Chitinophaga pinensis DSM 2588 hemin ABC transporter ATP-binding protein YP_003126823.1 9024842 R 485918 CDS YP_003126824.1 256426171 8363417 complement(9025687..9026742) 1 NC_013132.1 PFAM: transport system permease protein; KEGG: ret:RHE_CH03270 hemin transport system, permease protein; transport system permease 9026742 8363417 Cpin_7223 Chitinophaga pinensis DSM 2588 transport system permease YP_003126824.1 9025687 R 485918 CDS YP_003126825.1 256426172 8363418 complement(9026748..9027578) 1 NC_013132.1 PFAM: periplasmic binding protein; KEGG: hch:HCH_05461 ABC-type hemin transport system, periplasmic component; periplasmic binding protein 9027578 8363418 Cpin_7224 Chitinophaga pinensis DSM 2588 periplasmic binding protein YP_003126825.1 9026748 R 485918 CDS YP_003126826.1 256426173 8363419 9028081..9028332 1 NC_013132.1 hypothetical protein 9028332 8363419 Cpin_7225 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126826.1 9028081 D 485918 CDS YP_003126827.1 256426174 8363420 complement(9028338..9029216) 1 NC_013132.1 hypothetical protein 9029216 8363420 Cpin_7226 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126827.1 9028338 R 485918 CDS YP_003126828.1 256426175 8363421 complement(9029217..9031844) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: hypothetical protein; TonB-dependent receptor plug 9031844 8363421 Cpin_7227 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126828.1 9029217 R 485918 CDS YP_003126829.1 256426176 8363422 complement(9031868..9032818) 1 NC_013132.1 PFAM: FecR protein; KEGG: rpa:RPA3281 FecR, iron siderophore sensor protein; anti-FecI sigma factor FecR 9032818 8363422 Cpin_7228 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126829.1 9031868 R 485918 CDS YP_003126830.1 256426177 8363423 complement(9032981..9033496) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: cja:CJA_2681 RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 subunit 9033496 8363423 Cpin_7229 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126830.1 9032981 R 485918 CDS YP_003126831.1 256426178 8363424 9033647..9034669 1 NC_013132.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 9034669 8363424 Cpin_7230 Chitinophaga pinensis DSM 2588 dihydroorotate dehydrogenase 2 YP_003126831.1 9033647 D 485918 CDS YP_003126832.1 256426179 8363425 9034835..9035284 1 NC_013132.1 PFAM: protein of unknown function DUF1486; KEGG: scl:sce1212 hypothetical protein; hypothetical protein 9035284 8363425 Cpin_7231 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126832.1 9034835 D 485918 CDS YP_003126833.1 256426180 8363426 complement(9035359..9037359) 1 NC_013132.1 PFAM: protein of unknown function DUF1680; KEGG: sus:Acid_3381 hypothetical protein; hypothetical protein 9037359 8363426 Cpin_7232 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126833.1 9035359 R 485918 CDS YP_003126834.1 256426181 8363427 complement(9037371..9038987) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 9038987 8363427 Cpin_7233 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126834.1 9037371 R 485918 CDS YP_003126835.1 256426182 8363428 complement(9039006..9042365) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 9042365 8363428 Cpin_7234 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126835.1 9039006 R 485918 CDS YP_003126836.1 256426183 8363429 complement(9042555..9043391) 1 NC_013132.1 PFAM: FecR protein; KEGG: cja:CJA_1861 probable transmembrane sensor; anti-FecI sigma factor FecR 9043391 8363429 Cpin_7235 Chitinophaga pinensis DSM 2588 anti-FecI sigma factor FecR YP_003126836.1 9042555 R 485918 CDS YP_003126837.1 256426184 8363430 complement(9043642..9044169) 1 NC_013132.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pat:Patl_1332 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 9044169 8363430 Cpin_7236 Chitinophaga pinensis DSM 2588 ECF subfamily RNA polymerase sigma-24 subunit YP_003126837.1 9043642 R 485918 CDS YP_003126838.1 256426185 8363431 complement(9044330..9045034) 1 NC_013132.1 PFAM: protein of unknown function DUF558; KEGG: sde:Sde_0467 PAS/PAC sensor signal transduction histidine kinase; hypothetical protein 9045034 8363431 Cpin_7237 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126838.1 9044330 R 485918 CDS YP_003126839.1 256426186 8363432 complement(9045142..9046494) 1 NC_013132.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bba:Bd2342 mate efflux family protein; MATE efflux family protein 9046494 8363432 Cpin_7238 Chitinophaga pinensis DSM 2588 MATE efflux family protein YP_003126839.1 9045142 R 485918 CDS YP_003126840.1 256426187 8363433 complement(9046573..9048147) 1 NC_013132.1 KEGG: bcy:Bcer98_4008 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 9048147 8363433 Cpin_7239 Chitinophaga pinensis DSM 2588 replicative DNA helicase YP_003126840.1 9046573 R 485918 CDS YP_003126841.1 256426188 8363434 9048962..9051394 1 NC_013132.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 9051394 pheT 8363434 pheT Chitinophaga pinensis DSM 2588 phenylalanyl-tRNA synthetase subunit beta YP_003126841.1 9048962 D 485918 CDS YP_003126842.1 256426189 8363435 9051518..9051829 1 NC_013132.1 hypothetical protein 9051829 8363435 Cpin_7241 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126842.1 9051518 D 485918 CDS YP_003126843.1 256426190 8363436 9051847..9052140 1 NC_013132.1 hypothetical protein 9052140 8363436 Cpin_7242 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126843.1 9051847 D 485918 CDS YP_003126844.1 256426191 8363437 9052497..9054062 1 NC_013132.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 9054062 8363437 Cpin_7243 Chitinophaga pinensis DSM 2588 phosphodiesterase YP_003126844.1 9052497 D 485918 CDS YP_003126845.1 256426192 8363438 9054232..9054828 1 NC_013132.1 PFAM: protein of unknown function DUF1080; KEGG: sus:Acid_6142 hypothetical protein; hypothetical protein 9054828 8363438 Cpin_7244 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126845.1 9054232 D 485918 CDS YP_003126846.1 256426193 8363439 9054992..9055804 1 NC_013132.1 TIGRFAM: inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: bha:BH1532 purine nucleoside phosphorylase; inosine guanosine and xanthosine phosphorylase family protein 9055804 8363439 Cpin_7245 Chitinophaga pinensis DSM 2588 inosine guanosine and xanthosine phosphorylase family protein YP_003126846.1 9054992 D 485918 CDS YP_003126847.1 256426194 8363440 complement(9056130..9056480) 1 NC_013132.1 PFAM: helix-turn-helix HxlR type; KEGG: dvl:Dvul_0808 HxlR family transcriptional regulator; HxlR family transcriptional regulator 9056480 8363440 Cpin_7246 Chitinophaga pinensis DSM 2588 HxlR family transcriptional regulator YP_003126847.1 9056130 R 485918 CDS YP_003126848.1 256426195 8363441 9056604..9057362 1 NC_013132.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1016 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 9057362 8363441 Cpin_7247 Chitinophaga pinensis DSM 2588 short-chain dehydrogenase/reductase SDR YP_003126848.1 9056604 D 485918 CDS YP_003126849.1 256426196 8363442 complement(9057425..9058768) 1 NC_013132.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: scl:sce2028 hypothetical protein; chromosome segregation and condensation protein ScpB 9058768 8363442 Cpin_7248 Chitinophaga pinensis DSM 2588 chromosome segregation and condensation protein ScpB YP_003126849.1 9057425 R 485918 CDS YP_003126850.1 256426197 8363443 complement(9058926..9059810) 1 NC_013132.1 TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: ATP synthase F1, gamma subunit; K02115 F-type H+-transporting ATPase subunit gamma; ATP synthase F1 subunit gamma 9059810 8363443 Cpin_7249 Chitinophaga pinensis DSM 2588 ATP synthase F1 subunit gamma YP_003126850.1 9058926 R 485918 CDS YP_003126851.1 256426198 8363444 complement(9059932..9060855) 1 NC_013132.1 PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein; KWG repeat-containing protein 9060855 8363444 Cpin_7250 Chitinophaga pinensis DSM 2588 KWG repeat-containing protein YP_003126851.1 9059932 R 485918 CDS YP_003126852.1 256426199 8363445 complement(9060968..9061549) 1 NC_013132.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: pnu:Pnuc_1630 PfpI family intracellular peptidase; PfpI family intracellular protease 9061549 8363445 Cpin_7251 Chitinophaga pinensis DSM 2588 PfpI family intracellular protease YP_003126852.1 9060968 R 485918 CDS YP_003126853.1 256426200 8363446 complement(9061736..9063349) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 9063349 8363446 Cpin_7252 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126853.1 9061736 R 485918 CDS YP_003126854.1 256426201 8363447 complement(9063368..9066358) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 9066358 8363447 Cpin_7253 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126854.1 9063368 R 485918 CDS YP_003126855.1 256426202 8363448 9066654..9067976 1 NC_013132.1 PFAM: protein of unknown function DUF1080; KEGG: pzu:PHZ_c2159 hypothetical protein; hypothetical protein 9067976 8363448 Cpin_7254 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126855.1 9066654 D 485918 CDS YP_003126856.1 256426203 8363449 9068293..9070062 1 NC_013132.1 PFAM: protein of unknown function DUF885; KEGG: pha:PSHAb0514 lipoprotein, ounterparts found in phytopathogens; hypothetical protein 9070062 8363449 Cpin_7255 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126856.1 9068293 D 485918 CDS YP_003126857.1 256426204 8363450 9070471..9070821 1 NC_013132.1 KEGG: sus:Acid_1335 hypothetical protein; hypothetical protein 9070821 8363450 Cpin_7256 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126857.1 9070471 D 485918 CDS YP_003126858.1 256426205 8363451 complement(9070967..9073363) 1 NC_013132.1 PFAM: protein of unknown function DUF214; KEGG: cps:CPS_4700 ABC transporter, permease protein; hypothetical protein 9073363 8363451 Cpin_7257 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126858.1 9070967 R 485918 CDS YP_003126859.1 256426206 8363452 complement(9073605..9074396) 1 NC_013132.1 PFAM: protein of unknown function DUF81; KEGG: gox:GOX0571 hypothetical protein; hypothetical protein 9074396 8363452 Cpin_7258 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126859.1 9073605 R 485918 CDS YP_003126860.1 256426207 8363453 complement(9074707..9074940) 1 NC_013132.1 hypothetical protein 9074940 8363453 Cpin_7259 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126860.1 9074707 R 485918 CDS YP_003126861.1 256426208 8363454 complement(9075202..9076572) 1 NC_013132.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: gbm:Gbem_1823 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 9076572 8363454 Cpin_7260 Chitinophaga pinensis DSM 2588 type I phosphodiesterase/nucleotide pyrophosphatase YP_003126861.1 9075202 R 485918 CDS YP_003126862.1 256426209 8363455 complement(9076606..9077829) 1 NC_013132.1 KEGG: nha:Nham_0985 hypothetical protein; hypothetical protein 9077829 8363455 Cpin_7261 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126862.1 9076606 R 485918 CDS YP_003126863.1 256426210 8363456 complement(9077816..9078979) 1 NC_013132.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 9078979 aroB 8363456 aroB Chitinophaga pinensis DSM 2588 3-dehydroquinate synthase YP_003126863.1 9077816 R 485918 CDS YP_003126864.1 256426211 8363457 complement(9079080..9079982) 1 NC_013132.1 PFAM: UbiA prenyltransferase; KEGG: nha:Nham_0986 UbiA prenyltransferase; UbiA prenyltransferase 9079982 8363457 Cpin_7263 Chitinophaga pinensis DSM 2588 UbiA prenyltransferase YP_003126864.1 9079080 R 485918 CDS YP_003126865.1 256426212 8363458 complement(9080094..9081080) 1 NC_013132.1 PFAM: TatD-related deoxyribonuclease; KEGG: nha:Nham_0991 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 9081080 8363458 Cpin_7264 Chitinophaga pinensis DSM 2588 TatD-related deoxyribonuclease YP_003126865.1 9080094 R 485918 CDS YP_003126866.1 256426213 8363459 complement(9081187..9082074) 1 NC_013132.1 KEGG: nha:Nham_0987 hypothetical protein; hypothetical protein 9082074 8363459 Cpin_7265 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126866.1 9081187 R 485918 CDS YP_003126867.1 256426214 8363460 9082141..9082239 1 NC_013132.1 hypothetical protein 9082239 8363460 Cpin_7266 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126867.1 9082141 D 485918 CDS YP_003126868.1 256426215 8363461 complement(9082455..9084026) 1 NC_013132.1 PFAM: ribosomal protein L7/L12; KEGG: hypothetical protein; 50S ribosomal protein L7/L12 9084026 8363461 Cpin_7267 Chitinophaga pinensis DSM 2588 50S ribosomal protein L7/L12 YP_003126868.1 9082455 R 485918 CDS YP_003126869.1 256426216 8363462 complement(9084217..9084396) 1 NC_013132.1 hypothetical protein 9084396 8363462 Cpin_7268 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126869.1 9084217 R 485918 CDS YP_003126870.1 256426217 8363464 complement(9085039..9086835) 1 NC_013132.1 PFAM: RagB/SusD domain protein; RagB/SusD domain-containing protein 9086835 8363464 Cpin_7270 Chitinophaga pinensis DSM 2588 RagB/SusD domain-containing protein YP_003126870.1 9085039 R 485918 CDS YP_003126871.1 256426218 8363465 complement(9086893..9090147) 1 NC_013132.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mxa:MXAN_4746 TonB-dependent receptor; TonB-dependent receptor plug 9090147 8363465 Cpin_7271 Chitinophaga pinensis DSM 2588 TonB-dependent receptor plug YP_003126871.1 9086893 R 485918 CDS YP_003126872.1 256426219 8363466 complement(9090709..9091341) 1 NC_013132.1 similar to release factor 1 and 2; peptide chain release factor-like protein 9091341 prfH 8363466 prfH Chitinophaga pinensis DSM 2588 peptide chain release factor-like protein YP_003126872.1 9090709 R 485918 CDS YP_003126873.1 256426220 8363467 complement(9091346..9092782) 1 NC_013132.1 PFAM: protein of unknown function UPF0027; KEGG: pca:Pcar_2835 hypothetical protein; hypothetical protein 9092782 8363467 Cpin_7273 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126873.1 9091346 R 485918 CDS YP_003126874.1 256426221 8363468 9093202..9093576 1 NC_013132.1 KEGG: sde:Sde_1678 hypothetical protein; hypothetical protein 9093576 8363468 Cpin_7274 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126874.1 9093202 D 485918 CDS YP_003126875.1 256426222 8363469 complement(9093660..9097076) 1 NC_013132.1 PFAM: PKD domain containing protein; cytochrome C class I; SMART: PKD domain containing protein; KEGG: sde:Sde_0722 Crp/Fnr family transcriptional regulator; PKD domain-containing protein 9097076 8363469 Cpin_7275 Chitinophaga pinensis DSM 2588 PKD domain-containing protein YP_003126875.1 9093660 R 485918 CDS YP_003126876.1 256426223 8363470 complement(9097158..9097976) 1 NC_013132.1 KEGG: sde:Sde_0722 Crp/Fnr family transcriptional regulator; Crp/Fnr family transcriptional regulator 9097976 8363470 Cpin_7276 Chitinophaga pinensis DSM 2588 Crp/Fnr family transcriptional regulator YP_003126876.1 9097158 R 485918 CDS YP_003126877.1 256426224 8363471 complement(9097989..9098702) 1 NC_013132.1 PFAM: protein of unknown function DUF1080; KEGG: swd:Swoo_0366 hypothetical protein; hypothetical protein 9098702 8363471 Cpin_7277 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126877.1 9097989 R 485918 CDS YP_003126878.1 256426225 8363472 complement(9098834..9099250) 1 NC_013132.1 PFAM: cytochrome C class I; KEGG: dar:Daro_0692 cytochrome C, class I; cytochrome C class I 9099250 8363472 Cpin_7278 Chitinophaga pinensis DSM 2588 cytochrome C class I YP_003126878.1 9098834 R 485918 CDS YP_003126879.1 256426226 8363473 complement(9099585..9100640) 1 NC_013132.1 PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: smd:Smed_2788 xylose isomerase domain protein TIM barrel; xylose isomerase 9100640 8363473 Cpin_7279 Chitinophaga pinensis DSM 2588 xylose isomerase YP_003126879.1 9099585 R 485918 CDS YP_003126880.1 256426227 8363474 complement(9100770..9101933) 1 NC_013132.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: swd:Swoo_0362 oxidoreductase domain- containing protein; oxidoreductase domain-containing protein 9101933 8363474 Cpin_7280 Chitinophaga pinensis DSM 2588 oxidoreductase domain-containing protein YP_003126880.1 9100770 R 485918 CDS YP_003126881.1 256426228 8363475 9102622..9103371 1 NC_013132.1 PFAM: glycosyl transferase family 2; KEGG: dal:Dalk_0845 glycosyl transferase family 2; family 2 glycosyl transferase 9103371 8363475 Cpin_7281 Chitinophaga pinensis DSM 2588 family 2 glycosyl transferase YP_003126881.1 9102622 D 485918 CDS YP_003126882.1 256426229 8363476 9103378..9105066 1 NC_013132.1 KEGG: afw:Anae109_1817 hypothetical protein; hypothetical protein 9105066 8363476 Cpin_7282 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126882.1 9103378 D 485918 CDS YP_003126883.1 256426230 8363477 9105434..9106102 1 NC_013132.1 KEGG: bcb:BCB4264_A4425 hypothetical cytosolic protein; hypothetical protein 9106102 8363477 Cpin_7283 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126883.1 9105434 D 485918 CDS YP_003126884.1 256426231 8363478 9106426..9109782 1 NC_013132.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; KEGG: gur:Gura_1794 preprotein translocase subunit SecA; preprotein translocase subunit SecA 9109782 8363478 Cpin_7284 Chitinophaga pinensis DSM 2588 preprotein translocase subunit SecA YP_003126884.1 9106426 D 485918 CDS YP_003126885.1 256426232 8363479 9109888..9110535 1 NC_013132.1 KEGG: bce:BC1820 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 9110535 8363479 Cpin_7285 Chitinophaga pinensis DSM 2588 deoxyribose-phosphate aldolase YP_003126885.1 9109888 D 485918 CDS YP_003126886.1 256426233 8363480 9110546..9110986 1 NC_013132.1 PFAM: sporulation domain protein; sporulation domain-containing protein 9110986 8363480 Cpin_7286 Chitinophaga pinensis DSM 2588 sporulation domain-containing protein YP_003126886.1 9110546 D 485918 CDS YP_003126887.1 256426234 8363481 9110970..9112145 1 NC_013132.1 KEGG: rpc:RPC_1729 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 9112145 8363481 Cpin_7287 Chitinophaga pinensis DSM 2588 amidohydrolase YP_003126887.1 9110970 D 485918 CDS YP_003126888.1 256426235 8363482 complement(9112291..9112956) 1 NC_013132.1 hypothetical protein 9112956 8363482 Cpin_7288 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126888.1 9112291 R 485918 CDS YP_003126889.1 256426236 8363483 complement(9112975..9113346) 1 NC_013132.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vpa:VPA0034 GntR family transcriptional regulator; GntR family transcriptional regulator 9113346 8363483 Cpin_7289 Chitinophaga pinensis DSM 2588 GntR family transcriptional regulator YP_003126889.1 9112975 R 485918 CDS YP_003126890.1 256426237 8363484 complement(9113375..9114187) 1 NC_013132.1 hypothetical protein 9114187 8363484 Cpin_7290 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126890.1 9113375 R 485918 CDS YP_003126891.1 256426238 8363485 complement(9114193..9115026) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abu:Abu_1851 ABC transporter, ATP-binding protein; ABC transporter 9115026 8363485 Cpin_7291 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126891.1 9114193 R 485918 CDS YP_003126892.1 256426239 8363486 9115336..9116409 1 NC_013132.1 hypothetical protein 9116409 8363486 Cpin_7292 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126892.1 9115336 D 485918 CDS YP_003126893.1 256426240 8363487 complement(9116598..9117875) 1 NC_013132.1 PFAM: glycine hydroxymethyltransferase; KEGG: glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 9117875 8363487 Cpin_7293 Chitinophaga pinensis DSM 2588 glycine hydroxymethyltransferase YP_003126893.1 9116598 R 485918 CDS YP_003126894.1 256426241 8363488 9118170..9119162 1 NC_013132.1 PFAM: Nucleotidyl transferase; KEGG: pca:Pcar_0276 glucose-1-phosphate thymidylyltransferase; nucleotidyltransferase 9119162 8363488 Cpin_7294 Chitinophaga pinensis DSM 2588 nucleotidyltransferase YP_003126894.1 9118170 D 485918 CDS YP_003126895.1 256426242 8363489 9119238..9120173 1 NC_013132.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: oxidoreductase, 2-nitropropane dioxygenase family protein; K02371 enoyl-; 2-nitropropane dioxygenase 9120173 8363489 Cpin_7295 Chitinophaga pinensis DSM 2588 2-nitropropane dioxygenase YP_003126895.1 9119238 D 485918 CDS YP_003126896.1 256426243 8363490 complement(9120183..9121496) 1 NC_013132.1 KEGG: aba:Acid345_4513 hypothetical protein; hypothetical protein 9121496 8363490 Cpin_7296 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126896.1 9120183 R 485918 CDS YP_003126897.1 256426244 8363491 complement(9121556..9122521) 1 NC_013132.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_4512 ABC transporter, ATPase subunit; ABC transporter 9122521 8363491 Cpin_7297 Chitinophaga pinensis DSM 2588 ABC transporter YP_003126897.1 9121556 R 485918 CDS YP_003126898.1 256426245 8363492 complement(9122554..9123246) 1 NC_013132.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: hypothetical protein; LytTR family two component transcriptional regulator 9123246 8363492 Cpin_7298 Chitinophaga pinensis DSM 2588 LytTR family two component transcriptional regulator YP_003126898.1 9122554 R 485918 CDS YP_003126899.1 256426246 8363493 complement(9123243..9124748) 1 NC_013132.1 PFAM: histidine kinase internal region; KEGG: sde:Sde_3001 DEAD/DEAH box helicase-like; signal transduction histidine kinase LytS 9124748 8363493 Cpin_7299 Chitinophaga pinensis DSM 2588 signal transduction histidine kinase LytS YP_003126899.1 9123243 R 485918 CDS YP_003126900.1 256426247 8363494 complement(9124819..9126381) 1 NC_013132.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: dde:Dde_2466 hypothetical protein; FAD dependent oxidoreductase 9126381 8363494 Cpin_7300 Chitinophaga pinensis DSM 2588 FAD dependent oxidoreductase YP_003126900.1 9124819 R 485918 CDS YP_003126901.1 256426248 8363495 complement(9126487..9126870) 1 NC_013132.1 hypothetical protein 9126870 8363495 Cpin_7301 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126901.1 9126487 R 485918 CDS YP_003126902.1 256426249 8363496 9127000..9127119 1 NC_013132.1 hypothetical protein 9127119 8363496 Cpin_7302 Chitinophaga pinensis DSM 2588 hypothetical protein YP_003126902.1 9127000 D 485918 CDS