-- dump date 20240506_070938 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP092441.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP092441.1.REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, UniversityREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland.REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0xREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSIIREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54 Pseudo Genes (ambiguous residues) :: 0 of 54REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54 Pseudo Genes (ambiguous residues) :: 0 of 54 Pseudo Genes (frameshifted) :: 10 of 54REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54 Pseudo Genes (ambiguous residues) :: 0 of 54 Pseudo Genes (frameshifted) :: 10 of 54 Pseudo Genes (incomplete) :: 46 of 54REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54 Pseudo Genes (ambiguous residues) :: 0 of 54 Pseudo Genes (frameshifted) :: 10 of 54 Pseudo Genes (incomplete) :: 46 of 54 Pseudo Genes (internal stop) :: 5 of 54REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54 Pseudo Genes (ambiguous residues) :: 0 of 54 Pseudo Genes (frameshifted) :: 10 of 54 Pseudo Genes (incomplete) :: 46 of 54 Pseudo Genes (internal stop) :: 5 of 54 Pseudo Genes (multiple problems) :: 5 of 54REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54 Pseudo Genes (ambiguous residues) :: 0 of 54 Pseudo Genes (frameshifted) :: 10 of 54 Pseudo Genes (incomplete) :: 46 of 54 Pseudo Genes (internal stop) :: 5 of 54 Pseudo Genes (multiple problems) :: 5 of 54 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54 Pseudo Genes (ambiguous residues) :: 0 of 54 Pseudo Genes (frameshifted) :: 10 of 54 Pseudo Genes (incomplete) :: 46 of 54 Pseudo Genes (internal stop) :: 5 of 54 Pseudo Genes (multiple problems) :: 5 of 54 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP092441.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Bikiran Pardesi, University of Auckland. ##Genome-Assembly-Data-START## Assembly Method :: canu v. v1.7 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 238.0x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 12:12:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,088 CDSs (total) :: 3,015 Genes (coding) :: 2,961 CDSs (with protein) :: 2,961 Genes (RNA) :: 73 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5, 4, 4 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 54 CDSs (without protein) :: 54 Pseudo Genes (ambiguous residues) :: 0 of 54 Pseudo Genes (frameshifted) :: 10 of 54 Pseudo Genes (incomplete) :: 46 of 54 Pseudo Genes (internal stop) :: 5 of 54 Pseudo Genes (multiple problems) :: 5 of 54 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.