-- dump date 20140619_030333 -- class Genbank::CDS -- table cds_note -- id note YP_003591153.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: ccs:CCNA_00008 chromosomal replication initiator protein DnaA; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_003591154.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: ccs:CCNA_00009 alkylated DNA repair protein AlkB YP_003591155.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: ccs:CCNA_00011 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_003591156.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: ccs:CCNA_00012 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_003591157.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: ccs:CCNA_00013 protein-PII uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein YP_003591158.1 KEGG: pzu:PHZ_c0580 probable disulfide isomerase YP_003591159.1 KEGG: cak:Caul_0011 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_003591160.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: ccs:CCNA_00062 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003591161.1 PFAM: cytochrome P450; KEGG: ccs:CCNA_00061 cytochrome P450 YP_003591162.1 PFAM: Scaffold protein Nfu/NifU ; nitrogen-fixing NifU domain protein; KEGG: ccs:CCNA_00060 mitochondrial-type Fe-S cluster assembly protein NFU YP_003591163.1 PFAM: nitroreductase; KEGG: cak:Caul_0018 hypothetical protein YP_003591164.1 KEGG: ccs:CCNA_00058 hypothetical protein YP_003591165.1 PFAM: peptidase M22 glycoprotease; KEGG: ccs:CCNA_00057 glycoprotease family protein YP_003591166.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00056 ribosomal-protein-S18-alanine acetyltransferase YP_003591167.1 PFAM: ferric-uptake regulator; KEGG: cak:Caul_0013 ferric uptake regulator family protein YP_003591168.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: ccs:CCNA_00054 tRNA 2-methylthioadenosine synthase; SMART: Elongator protein 3/MiaB/NifB YP_003591169.1 PFAM: PhoH family protein; KEGG: ccs:CCNA_00053 phosphate starvation-inducible protein PhoH YP_003591170.1 PFAM: protein of unknown function UPF0054; KEGG: ccs:CCNA_00052 predicted metal-dependent hydrolase YP_003591171.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: ccs:CCNA_00051 magnesium and cobalt efflux protein CorC YP_003591172.1 KEGG: ccs:CCNA_00050 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003591173.1 KEGG: ccs:CCNA_00049 HTH transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003591174.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: ccs:CCNA_00048 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003591175.1 TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; KEGG: ccs:CCNA_00047 tRNA M7-G46 methyltransferase; PFAM: methyltransferase YP_003591176.1 KEGG: ccs:CCNA_00045 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_003591177.1 PFAM: protein of unknown function DUF150; KEGG: ccs:CCNA_00044 cytosolic protein YP_003591178.1 KEGG: ccs:CCNA_00043 N utilization substance protein A; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; K Homology, type 1, subgroup YP_003591179.1 PFAM: protein of unknown function DUF448; KEGG: ccs:CCNA_00042 cytosolic protein/LSU ribosomal protein L7AE YP_003591180.1 KEGG: ccs:CCNA_00039 hypothetical protein YP_003591181.1 KEGG: ccs:CCNA_00038 hypothetical protein YP_003591182.1 PFAM: dienelactone hydrolase; KEGG: ccs:CCNA_00037 esterase lipase family protein YP_003591183.1 KEGG: ccs:CCNA_00036 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_003591184.1 KEGG: ccs:CCNA_00035 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_003591185.1 KEGG: ccs:CCNA_00034 SSU ribosomal protein S15P; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_003591186.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: ccs:CCNA_00033 polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_003591187.1 KEGG: gme:Gmet_2547 hypothetical protein YP_003591188.1 PFAM: protein of unknown function DUF1206; KEGG: cak:Caul_3704 hypothetical protein YP_003591189.1 PFAM: alpha/beta hydrolase fold; KEGG: cak:Caul_0299 alpha/beta hydrolase fold YP_003591190.1 PFAM: ribonuclease T2; KEGG: ccs:CCNA_00030 ribonuclease YP_003591191.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ccs:CCNA_00029 lysine exporter protein YP_003591192.1 KEGG: ccs:CCNA_00028 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003591193.1 KEGG: ccs:CCNA_00027 2OG-Fe(II) oxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit YP_003591194.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; PAS fold-3 domain protein; response regulator receiver; KEGG: ccs:CCNA_00026 PAS-family sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver YP_003591195.1 KEGG: ccs:CCNA_00024 uroporphyrin-III C-methyltransferase/precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase; TIGRFAM: siroheme synthase; PFAM: Sirohaem synthase, dimerisation domain YP_003591196.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: ccs:CCNA_00022 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS YP_003591197.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: ccs:CCNA_00021 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL YP_003591198.1 KEGG: ccs:CCNA_00020 mypothetical protein YP_003591199.1 KEGG: ccs:CCNA_00019 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003591200.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: ccs:CCNA_00018 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_003591201.1 KEGG: cak:Caul_0057 molybdopterin converting factor, subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_003591202.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: ccs:CCNA_00016 molybdopterin converting factor, large subunit YP_003591203.1 KEGG: cak:Caul_0059 molybdenum cofactor biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_003591204.1 KEGG: ccs:CCNA_00014 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region YP_003591205.1 PFAM: YCII-related; KEGG: rhi:NGR_b07690 hypothetical protein YP_003591206.1 KEGG: ccs:CCNA_00064 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003591207.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ccs:CCNA_00066 Rieske (2Fe-2S) domain protein YP_003591208.1 PFAM: YCII-related; KEGG: ccs:CCNA_00067 cytosolic protein YP_003591209.1 KEGG: ccs:CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_003591210.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: ccs:CCNA_00069 O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease YP_003591211.1 TIGRFAM: porphobilinogen deaminase; KEGG: ccs:CCNA_00070 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_003591212.1 PFAM: uroporphyrinogen III synthase; KEGG: ccs:CCNA_00071 uroporphyrinogen-III synthase YP_003591213.1 PFAM: HemY domain protein; Tetratricopeptide TPR_4; KEGG: ccs:CCNA_00073 HemY domain membrane protein YP_003591214.1 KEGG: ccs:CCNA_01461 hypothetical protein YP_003591215.1 KEGG: cak:Caul_0122 hypothetical protein YP_003591216.1 KEGG: cak:Caul_0124 hypothetical protein YP_003591217.1 KEGG: ccs:CCNA_00075 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase YP_003591218.1 KEGG: ccs:CCNA_00076 hypothetical protein YP_003591219.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_00077 acyl-CoA dehydrogenase, long-chain specific YP_003591220.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_00078 acyl-CoA dehydrogenase YP_003591221.1 KEGG: ccs:CCNA_00079 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003591222.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: ccs:CCNA_00080 LexA-related transcriptional repressor YP_003591223.1 KEGG: ccs:CCNA_00081 hypothetical protein YP_003591224.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: ccs:CCNA_00082 class 1 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic YP_003591225.1 KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003591226.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: ccs:CCNA_00084 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_003591227.1 KEGG: ccs:CCNA_00085 dienelactone hydrolase-related protein YP_003591228.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: cak:Caul_4786 hypothetical protein YP_003591229.1 PFAM: NAD-glutamate dehydrogenase; KEGG: ccs:CCNA_00086 NAD-specific glutamate dehydrogenase YP_003591230.1 PFAM: protein of unknown function UPF0118; KEGG: ccs:CCNA_00087 hypothetical protein YP_003591231.1 PFAM: protein of unknown function DUF853 NPT hydrolase KEGG: ccs:CCNA_00088 HerA helicase-related ATPase YP_003591232.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ccs:CCNA_02465 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003591233.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_02463 UDP-N-acetylglucosamine 4-epimerase YP_003591234.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccs:CCNA_00091 transporter, drug/metabolite exporter family YP_003591235.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00092 short chain dehydrogenase YP_003591236.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ccs:CCNA_00095 quinone oxidoreductase YP_003591237.1 PFAM: peptidase T2 asparaginase 2; KEGG: ccs:CCNA_00096 L-asparaginase YP_003591238.1 KEGG: hch:HCH_00884 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_003591239.1 KEGG: min:Minf_1073 hypothetical protein YP_003591240.1 KEGG: sro:Sros_4526 efflux transporter YP_003591241.1 PFAM: AAA-4 family protein; KEGG: gem:GM21_1016 transcriptional regulator YP_003591242.1 KEGG: ccs:CCNA_00098 hypothetical protein YP_003591243.1 PFAM: Heparinase II/III family protein; KEGG: ccs:CCNA_00099 cytosolic protein YP_003591244.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: cak:Caul_4780 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003591245.1 KEGG: ccs:CCNA_00101 16S rRNA m5C methyltransferase RsmB; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_003591246.1 KEGG: cak:Caul_4778 signal peptide protein YP_003591247.1 PFAM: protein of unknown function DUF1674; KEGG: ccs:CCNA_00102 cytosolic protein YP_003591248.1 KEGG: cak:Caul_4209 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_003591249.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: ccs:CCNA_00104 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003591250.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ccs:CCNA_00105 MarC family integral membrane protein YP_003591251.1 KEGG: ccs:CCNA_00106 2-polyprenyl-6-methoxyphenol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase YP_003591252.1 PFAM: protein of unknown function DUF343; KEGG: ccs:CCNA_00107 hypothetical protein YP_003591253.1 KEGG: ccs:CCNA_00108 ATP-dependent endopeptidase Lon; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein YP_003591254.1 PFAM: Thioredoxin domain; KEGG: ccs:CCNA_00109 thioredoxin YP_003591255.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ccs:CCNA_00110 DNA-binding protein YP_003591256.1 KEGG: ccs:CCNA_00111 hypothetical protein YP_003591257.1 PFAM: amidohydrolase; WD40 domain protein beta Propeller; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: ccs:CCNA_00115 TolB protein YP_003591258.1 TIGRFAM: phosphoglucosamine mutase; KEGG: ccs:CCNA_00116 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003591259.1 KEGG: ccs:CCNA_00117 glucosamine-fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_003591260.1 KEGG: pat:Patl_0444 hypothetical protein YP_003591261.1 PFAM: amino acid permease-associated region; KEGG: sen:SACE_5198 amino acid permease-associated region YP_003591262.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: cak:Caul_4615 cyclopropane-fatty-acyl-phospholipid synthase YP_003591263.1 PFAM: protein of unknown function UPF0066; KEGG: ccs:CCNA_00119 transcriptional regulator YP_003591264.1 KEGG: ccs:CCNA_00121 hypothetical protein YP_003591265.1 PFAM: protein of unknown function DUF1232; KEGG: ccs:CCNA_00122 hypothetical protein YP_003591266.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00123 3-hydroxyacyl CoA dehydrogenase YP_003591267.1 KEGG: ccs:CCNA_00124 hypothetical protein YP_003591268.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ccs:CCNA_00125 amino acid efflux permease YP_003591269.1 PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: ccs:CCNA_00126 glutathione S-transferase YP_003591270.1 KEGG: cak:Caul_0203 hypothetical protein YP_003591271.1 TIGRFAM: argininosuccinate synthase; KEGG: ccs:CCNA_00128 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003591272.1 KEGG: ccs:CCNA_00129 hypothetical protein YP_003591273.1 PFAM: protein of unknown function UPF0074; KEGG: ccs:CCNA_00131 Rrf2 family protein YP_003591274.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: cak:Caul_4769 flavodoxin/nitric oxide synthase YP_003591275.1 KEGG: ccs:CCNA_03663 NADP-dependent malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase YP_003591276.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: ccs:CCNA_03664 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003591277.1 KEGG: ccs:CCNA_03665 hypothetical protein YP_003591278.1 KEGG: ccs:CCNA_03666 hypothetical protein YP_003591279.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_03667 cytosolic protein YP_003591280.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: ccs:CCNA_01727 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer YP_003591281.1 KEGG: mno:Mnod_1113 transcriptional regulator, TrmB; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003591282.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccs:CCNA_03581 transporter, drug/metabolite exporter family YP_003591283.1 PFAM: Usg family protein; KEGG: ccs:CCNA_03660 Usg protein YP_003591284.1 KEGG: ccs:CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_003591285.1 KEGG: ccs:CCNA_03658 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003591286.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: ccs:CCNA_03657 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain YP_003591287.1 KEGG: ccs:CCNA_03656 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_003591288.1 TIGRFAM: FolC bifunctional protein; KEGG: ccs:CCNA_03655 folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase middle domain protein YP_003591289.1 KEGG: ccr:CC_3540 hypothetical protein YP_003591290.1 KEGG: ccs:CCNA_03653 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain YP_003591291.1 KEGG: ccs:CCNA_03652 ATP-dependent nuclease subunit A; TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase YP_003591292.1 TIGRFAM: double-strand break repair protein AddB; KEGG: ccs:CCNA_03651 ATP-dependent nuclease subunit B YP_003591293.1 PFAM: Nucleotidyl transferase; KEGG: cak:Caul_4851 nucleotidyl transferase YP_003591294.1 PFAM: aminoglycoside phosphotransferase; KEGG: ccs:CCNA_03649 Ser/Thr kinase-related phosphotransferase YP_003591295.1 PFAM: protein of unknown function UPF0079; KEGG: ccs:CCNA_03648 ATP/GTP hydrolase YP_003591296.1 PFAM: AFG1-family ATPase; KEGG: ccs:CCNA_03646 ATPase YP_003591297.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_03645 phosphohydrolase (MutT/NUDIX family protein) YP_003591298.1 KEGG: pzu:PHZ_c0598 sensor histidine kinase; PFAM: HWE histidine kinase; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_003591299.1 KEGG: ccs:CCNA_03644 succinate dehydrogenase cytochrome b-556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_003591300.1 KEGG: ccs:CCNA_03643 succinate dehydrogenase membrane anchor subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit YP_003591301.1 KEGG: ccs:CCNA_03642 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003591302.1 KEGG: ccs:CCNA_03641 succinate dehydrogenase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003591303.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ccs:CCNA_03640 ferredoxin NAD(+) reductase YP_003591304.1 PFAM: ferredoxin; KEGG: cak:Caul_4835 ferredoxin YP_003591305.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: ccs:CCNA_03637 adenylate cyclase family YP_003591306.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: ccs:CCNA_03636 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_003591307.1 KEGG: hypothetical protein YP_003591308.1 PFAM: PRC-barrel domain protein; KEGG: ccs:CCNA_01839 hypothetical protein YP_003591309.1 KEGG: nar:Saro_2543 hypothetical protein YP_003591310.1 KEGG: swi:Swit_0420 hypothetical protein YP_003591311.1 KEGG: swi:Swit_0248 hypothetical protein YP_003591312.1 KEGG: similar to CG33274-PA YP_003591313.1 KEGG: ccs:CCNA_00241 phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003591314.1 PFAM: PTS system fructose subfamily IIA component; KEGG: ccr:CC_0240 PTS system, IIA component YP_003591315.1 PFAM: HPr serine kinase domain protein; KEGG: ccs:CCNA_00239 HPr(SER) kinase/phosphatase YP_003591316.1 KEGG: ccs:CCNA_00238 two-component sensor histidine kinase ChvG; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003591317.1 KEGG: ccs:CCNA_00237 two-component response regulator ChvI; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003591318.1 KEGG: ccs:CCNA_00236 hypothetical protein YP_003591319.1 KEGG: RING zinc finger protein YP_003591320.1 KEGG: amr:AM1_E0026 hypothetical protein YP_003591321.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: cak:Caul_3594 ethyl tert-butyl ether degradation EthD YP_003591322.1 KEGG: ccs:CCNA_00666 response regulator receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003591323.1 PFAM: HWE histidine kinase; GAF domain protein; KEGG: ccs:CCNA_00665 GAF-family sensor histidine kinase YP_003591324.1 KEGG: ccs:CCNA_00234 WecE-family cell wall biogenesis enzyme; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_003591325.1 KEGG: ccr:CC_0233 flagellin modification protein FlmA; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: polysaccharide biosynthesis protein CapD YP_003591326.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ccs:CCNA_00231 tRNA-specific adenosine deaminase YP_003591327.1 KEGG: ccs:CCNA_00230 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_003591328.1 PFAM: Abortive infection protein; KEGG: ccs:CCNA_00229 CAAX amino terminal protease family protein YP_003591329.1 PFAM: protein of unknown function DUF1211; KEGG: ccs:CCNA_00228 hypothetical protein YP_003591330.1 KEGG: ccs:CCNA_00227 methyltransferase; TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase YP_003591331.1 PFAM: Protein of unknown function DUF2084; KEGG: ccr:CC_0226 hypothetical protein YP_003591332.1 PFAM: AsmA family protein; KEGG: cak:Caul_4644 AsmA family protein YP_003591333.1 KEGG: ccs:CCNA_00244 hydrolase (HAD superfamily); TIGRFAM: HAD-superfamily hydrolase, phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003591334.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: ccs:CCNA_00245 pterin-4-alpha-carbinolamine dehydratase YP_003591335.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00246 cyclohexanol dehydrogenase YP_003591336.1 KEGG: ccs:CCNA_00247 two-component receiver protein; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver YP_003591337.1 KEGG: ccs:CCNA_00248 sensor histidine protein kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003591338.1 PFAM: electron transport protein SCO1/SenC; KEGG: ccs:CCNA_00249 SCO1/SenC family protein YP_003591339.1 KEGG: ccs:CCNA_00250 poly(3-hydroxyalkanoate) depolymerase; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_003591340.1 PFAM: protein of unknown function DUF45; KEGG: ccs:CCNA_00251 zinc metalloprotease YP_003591341.1 KEGG: ccs:CCNA_00252 multimodular transpeptidase-transglycosylase PBP 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003591342.1 KEGG: ccs:CCNA_03122 hypothetical protein YP_003591343.1 KEGG: ccs:CCNA_03123 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003591344.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: ccs:CCNA_03578 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein YP_003591345.1 KEGG: ccs:CCNA_03579 hypothetical protein YP_003591346.1 PFAM: protein of unknown function DUF1052; KEGG: ccs:CCNA_03580 hypothetical protein YP_003591347.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_1601 hypothetical protein YP_003591348.1 KEGG: atc:AGR_pAT_294 hypothetical protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003591349.1 KEGG: cyt:cce_4531 hypothetical protein YP_003591350.1 PFAM: Lipocalin family protein; KEGG: ccs:CCNA_03592 outer membrane lipoprotein Blc YP_003591351.1 KEGG: ccs:CCNA_03593 integral membrane protein YP_003591352.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bja:bll7605 hypothetical protein YP_003591353.1 KEGG: rpb:RPB_0180 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003591354.1 KEGG: azc:AZC_1345 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003591355.1 PFAM: zinc finger SWIM domain protein; KEGG: ccs:CCNA_03596 hypothetical protein YP_003591356.1 PFAM: protein of unknown function DUF1025; KEGG: ccs:CCNA_03597 acetylglutamate kinase YP_003591357.1 KEGG: ccs:CCNA_03598 two-component sensor histidine kinase DivL; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003591358.1 TIGRFAM: adenosylhomocysteinase; KEGG: ccs:CCNA_00257 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_003591359.1 KEGG: cak:Caul_4622 pyridoxine kinase YP_003591360.1 KEGG: ccs:CCNA_00254 RarD family membrane permease; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_003591361.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: ccs:CCNA_00253 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_003591362.1 TIGRFAM: TonB family protein; KEGG: ccs:CCNA_02419 TonB1 protein YP_003591363.1 SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; TIGRFAM: DNA polymerase I; KEGG: ccs:CCNA_03577 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease YP_003591364.1 KEGG: cak:Caul_0222 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003591365.1 KEGG: cak:Caul_4753 hypothetical protein YP_003591366.1 KEGG: cak:Caul_4752 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003591367.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03574 TonB-dependent receptor YP_003591368.1 PFAM: protein of unknown function DUF477; KEGG: ccr:CC_3457 hypothetical protein YP_003591369.1 PFAM: protein of unknown function DUF477; KEGG: ccs:CCNA_03569 hypothetical protein YP_003591370.1 PFAM: LemA family protein; KEGG: ccs:CCNA_03568 LemA protein YP_003591371.1 KEGG: ccs:CCNA_03564 hypothetical protein YP_003591372.1 KEGG: ccs:CCNA_03563 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_003591373.1 TIGRFAM: ATP synthase F1, alpha subunit; KEGG: ccs:CCNA_03562 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003591374.1 KEGG: ccs:CCNA_03561 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_003591375.1 SMART: AAA ATPase; TIGRFAM: ATP synthase F1, beta subunit; KEGG: ccs:CCNA_03560 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003591376.1 KEGG: ccs:CCNA_03559 hypothetical protein YP_003591377.1 PFAM: ATPase, F1 complex, delta/epsilon subunit-like; KEGG: ccs:CCNA_03558 ATP synthase subunit epsilon YP_003591378.1 KEGG: ccs:CCNA_03557 hypothetical protein YP_003591379.1 PFAM: small multidrug resistance protein; KEGG: ccs:CCNA_03556 quaternary ammonium compound-resistance protein YP_003591380.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_03555 esterase lipase family protein YP_003591381.1 PFAM: PGAP1 family protein; KEGG: ccs:CCNA_03554 esterase lipase family protein YP_003591382.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_03553 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) YP_003591383.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: ccs:CCNA_03552 hypothetical protein YP_003591384.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: ccs:CCNA_03548 carboxy-terminal processing protease precursor; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein YP_003591385.1 PFAM: Peptidase M23; KEGG: ccs:CCNA_03547 peptidoglycan-specific endopeptidase, M23 family YP_003591386.1 PFAM: protein of unknown function DUF163; KEGG: ccs:CCNA_03546 cytosolic protein YP_003591387.1 KEGG: ccs:CCNA_03545 iojap protein family; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_003591388.1 PFAM: cytidylyltransferase; manually curated; KEGG: ccs:CCNA_03544 nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase YP_003591389.1 KEGG: ccs:CCNA_03543 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase YP_003591390.1 KEGG: bpd:BURPS668_A0681 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003591391.1 PFAM: aldo/keto reductase; KEGG: ccs:CCNA_03541 2,5-diketo-D-gluconic acid reductase YP_003591392.1 KEGG: ccs:CCNA_03540 integral membrane protein YP_003591393.1 PFAM: protein of unknown function DUF661; KEGG: ccs:CCNA_03539 hypothetical protein YP_003591394.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_03538 NADH-ubiquinone oxidoreductase YP_003591395.1 PFAM: protein of unknown function UPF0153; KEGG: cak:Caul_0365 hypothetical protein YP_003591396.1 KEGG: cak:Caul_3782 hypothetical protein YP_003591397.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_03537 glyoxalase family protein YP_003591398.1 PFAM: ribosomal L11 methyltransferase; KEGG: cak:Caul_0363 hypothetical protein YP_003591399.1 PFAM: fatty acid desaturase; KEGG: ccs:CCNA_03535 fatty acid desaturase YP_003591400.1 KEGG: cak:Caul_0360 hypothetical protein YP_003591401.1 KEGG: ccs:CCNA_03534 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_003591402.1 KEGG: gbe:GbCGDNIH1_1969 catalase; PFAM: Catalase related subgroup; Catalase domain protein YP_003591403.1 KEGG: cak:Caul_0358 hypothetical protein YP_003591404.1 PFAM: isochorismatase hydrolase; KEGG: sro:Sros_0370 isochorismatase hydrolase YP_003591405.1 KEGG: cak:Caul_0357 hypothetical protein YP_003591406.1 KEGG: ccs:CCNA_03533 multidrug resistance ABC transporter ATP-binding and permease protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003591407.1 KEGG: ccs:CCNA_03532 transporter YP_003591408.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: ccs:CCNA_03531 carboxypeptidase S1 YP_003591409.1 PFAM: Domain of unknown function DUF1801; KEGG: ccs:CCNA_03530 hypothetical protein YP_003591410.1 PFAM: protein of unknown function DUF344; KEGG: ccs:CCNA_03529 polyphosphate kinase YP_003591411.1 PFAM: protein of unknown function DUF558; KEGG: ccs:CCNA_03528 surface protein YP_003591412.1 TIGRFAM: glutamate/cysteine ligase; KEGG: ccs:CCNA_03527 glutamate-cysteine ligase; PFAM: glutamate--cysteine ligase GCS2 YP_003591413.1 KEGG: ccs:CCNA_03526 hypothetical protein YP_003591414.1 PFAM: protein of unknown function DUF427; KEGG: cak:Caul_0373 hypothetical protein YP_003591415.1 KEGG: ccs:CCNA_03524 di-/tripeptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_003591416.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_03523 hypothetical protein YP_003591417.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ccs:CCNA_03522 microcin-processing peptidase 2 (TldD) YP_003591418.1 KEGG: ccs:CCNA_03521 hypothetical protein YP_003591419.1 PFAM: protein of unknown function DUF1700; KEGG: ccs:CCNA_03520 hypothetical protein YP_003591420.1 PFAM: transcriptional regulator PadR family protein; KEGG: ccs:CCNA_03519 transcriptional regulator, PadR family YP_003591421.1 KEGG: ccs:CCNA_03518 cytochrome C oxidase polypeptide II CoxB; TIGRFAM: cytochrome C oxidase, subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_003591422.1 TIGRFAM: cytochrome C oxidase, subunit I; KEGG: ccs:CCNA_03517 cytochrome C oxidase polypeptide I CoxA; PFAM: cytochrome C oxidase subunit I YP_003591423.1 KEGG: ccs:CCNA_03516 protoheme IX farnesyltransferase CoxE; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_003591424.1 KEGG: ccs:CCNA_03515 hypothetical protein YP_003591425.1 PFAM: cytochrome C oxidase assembly protein CtaG/Cox11; KEGG: ccs:CCNA_03514 cytochrome C oxidase assembly protein CtaG YP_003591426.1 KEGG: ccs:CCNA_03513 cytochrome C oxidase subunit III CoxC; PFAM: cytochrome C oxidase subunit III YP_003591427.1 PFAM: protein of unknown function DUF983; KEGG: ccs:CCNA_03512 zinc-finger protein YP_003591428.1 KEGG: ccs:CCNA_03511 cytochrome C oxidase assembly protein SURF1 YP_003591429.1 KEGG: ccs:CCNA_03509 zinc protease; PFAM: peptidase M16 domain protein YP_003591430.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_03508 ribosomal-protein-S5-alanine acetyltransferase YP_003591431.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: ccs:CCNA_03507 GGDEF/EAL diguanylate cyclase-phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_003591432.1 PFAM: protein of unknown function DUF179; KEGG: ccs:CCNA_03506 transcriptional regulator, AlgH YP_003591433.1 PFAM: Redoxin domain protein; KEGG: ccs:CCNA_03505 peroxiredoxin YP_003591434.1 KEGG: mlo:mlr2690 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003591435.1 PFAM: alpha/beta hydrolase fold; KEGG: cak:Caul_0299 alpha/beta hydrolase fold YP_003591436.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_03504 acyl-CoA dehydrogenase YP_003591437.1 PFAM: YceI family protein; KEGG: ccs:CCNA_03503 YceI-family periplasmic protein YP_003591438.1 PFAM: cytochrome B561; YceI family protein; KEGG: ccs:CCNA_03502 YceI/cytochrome b561 periplasmic protein YP_003591439.1 manually curated; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; KEGG: ccs:CCNA_03501 SUA5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein YP_003591440.1 KEGG: ccs:CCNA_03499 hypothetical protein YP_003591441.1 KEGG: ccs:CCNA_03498 transcriptional regulator, MarR/EmrR family protein YP_003591442.1 KEGG: ccs:CCNA_03497 hypothetical protein YP_003591443.1 PFAM: Domain of unknown function DUF1801; KEGG: sus:Acid_1884 hypothetical protein YP_003591444.1 PFAM: protein of unknown function DUF328; KEGG: ccs:CCNA_03496 cytosolic protein YP_003591445.1 KEGG: ccs:CCNA_03495 D-beta-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_003591446.1 PFAM: Patatin; KEGG: ccs:CCNA_03494 serine protease YP_003591447.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_03493 phosphohydrolase (MutT/NUDIX family protein) YP_003591448.1 KEGG: sus:Acid_3893 hypothetical protein YP_003591449.1 PFAM: peptidase M50; KEGG: ccs:CCNA_03492 transporter YP_003591450.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_03491 3-oxoacyl-(acyl-carrier protein) reductase YP_003591451.1 KEGG: ccs:CCNA_03490 hypothetical protein YP_003591452.1 PFAM: helix-turn-helix HxlR type; KEGG: mxa:MXAN_4036 transcriptional regulator YP_003591453.1 PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_A3446 glutathione S-transferase YP_003591454.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ccs:CCNA_03489 nitropropane dioxygenase/trans-enoyl-CoA reductase family YP_003591455.1 SMART: regulatory protein Crp; KEGG: cak:Caul_4415 CRP/FNR family transcriptional regulator YP_003591456.1 KEGG: ccs:CCNA_03487 hypothetical protein YP_003591457.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_03486 hypothetical protein YP_003591458.1 KEGG: ccs:CCNA_03485 membrane protease family, stomatin/prohibitin-like protein; PFAM: band 7 protein; SMART: band 7 protein YP_003591459.1 PFAM: protein of unknown function DUF107; KEGG: ccs:CCNA_03484 hypothetical protein YP_003591460.1 KEGG: ccs:CCNA_03483 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003591461.1 PFAM: ABC transporter; KEGG: ccs:CCNA_03482 ABC transporter permease protein YP_003591462.1 PFAM: Resolvase domain; KEGG: ccs:CCNA_03481 DNA integration/recombination/inversion protein YP_003591463.1 PFAM: NmrA family protein; KEGG: ccs:CCNA_03480 hypothetical protein YP_003591464.1 PFAM: helix-turn-helix HxlR type; KEGG: ccs:CCNA_03479 transcriptional regulator, MarR family YP_003591465.1 PFAM: ribonuclease H; KEGG: ccs:CCNA_03476 ribonuclease HI YP_003591466.1 TIGRFAM: homoserine kinase; KEGG: ccs:CCNA_03475 homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_003591467.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: ccs:CCNA_03471 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_003591468.1 KEGG: cak:Caul_4390 hypothetical protein YP_003591469.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: ccs:CCNA_03469 arginyl-tRNA synthetase YP_003591470.1 KEGG: ccs:CCNA_03468 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003591471.1 KEGG: ccs:CCNA_03465 aminomethyltransferase; TIGRFAM: glycine cleavage system protein T; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_003591472.1 KEGG: ccs:CCNA_03464 glycine cleavage system protein H; TIGRFAM: glycine cleavage system protein H; PFAM: glycine cleavage H-protein YP_003591473.1 KEGG: ccs:CCNA_03463 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein-like YP_003591474.1 KEGG: ccs:CCNA_03462 glycine dehydrogenase (decarboxylating); PFAM: aminotransferase class V YP_003591475.1 KEGG: ccs:CCNA_03461 hypothetical protein YP_003591476.1 KEGG: ccs:CCNA_03460 hypothetical protein YP_003591477.1 PFAM: Glutathione S-transferase domain; KEGG: msl:Msil_0409 glutathione S-transferase domain protein YP_003591478.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: ccs:CCNA_00370 ATP synthase B chain YP_003591479.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: ccs:CCNA_00371 ATP synthase B' chain YP_003591480.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: ccs:CCNA_00372 ATP synthase C chain YP_003591481.1 KEGG: ccs:CCNA_00373 ATP synthase A chain; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_003591482.1 KEGG: ccs:CCNA_00374 ATP synthase protein I YP_003591483.1 KEGG: ccs:CCNA_00375 hypothetical protein YP_003591484.1 PFAM: protein of unknown function DUF81; KEGG: ccs:CCNA_00376 hypothetical protein YP_003591485.1 KEGG: ccs:CCNA_00377 chromosome partition protein smc; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein YP_003591486.1 KEGG: ccs:CCNA_00378 thiol:disulfide interchange protein DsbA YP_003591487.1 PFAM: DSBA oxidoreductase; KEGG: cak:Caul_4371 DsbA oxidoreductase YP_003591488.1 PFAM: protein of unknown function DUF721; KEGG: ccs:CCNA_00380 cytosolic protein YP_003591489.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: ccs:CCNA_00381 A/G-specific adenine DNA glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003591490.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ccs:CCNA_00382 adenine-specific methyltransferase CcrM YP_003591491.1 KEGG: ccs:CCNA_00383 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_003591492.1 KEGG: ccs:CCNA_00384 glucan endo-1,3-beta-glucosidase; PFAM: glycosyl hydrolase family 16 YP_003591493.1 KEGG: hypothetical protein YP_003591494.1 PFAM: cytochrome B561; KEGG: ccs:CCNA_03017 hydrogenase, cytochrome b-type subunit YP_003591495.1 KEGG: ccs:CCNA_03016 transcriptional regulatory protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003591496.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_00385 multidrug resistance protein YP_003591497.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cak:Caul_2864 cupin 2 domain-containing protein YP_003591498.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: ccs:CCNA_00386 DNA-3-methyladenine glycosylase; PFAM: methyladenine glycosylase YP_003591499.1 KEGG: ccs:CCNA_00387 hypothetical protein YP_003591500.1 KEGG: ccs:CCNA_00389 aminomethyltransferase family protein; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_003591501.1 PFAM: glycosyl transferase family 9; KEGG: ccs:CCNA_00390 ADP-heptose--LPS heptosyltransferase YP_003591502.1 KEGG: ccs:CCNA_00392 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; amidohydrolase YP_003591503.1 manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: ccs:CCNA_00393 RNA polymerase sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; Tetratricopeptide TPR_2 repeat protein YP_003591504.1 PFAM: YCII-related; KEGG: ccs:CCNA_00394 cytosolic protein YP_003591505.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_00395 feruloyl-CoA synthetase YP_003591506.1 PFAM: YhhN family protein; KEGG: cak:Caul_4354 YhhN family protein YP_003591507.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ccs:CCNA_00397 acetolactate synthase YP_003591508.1 KEGG: ccs:CCNA_00398 hypothetical protein YP_003591509.1 KEGG: ccs:CCNA_00399 zinc metallohydrolase, glyoxalase II family YP_003591510.1 KEGG: ccs:CCNA_00400 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003591511.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_00401 delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase YP_003591512.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00403 short chain dehydrogenase YP_003591513.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00405 short chain dehydrogenase YP_003591514.1 KEGG: ccs:CCNA_00406 DNA transformation protein TfoX; manually curated; PFAM: TfoX domain protein YP_003591515.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00407 diamine acetyltransferase YP_003591516.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_00408 macrolide-efflux protein YP_003591517.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00410 acetyltransferase YP_003591518.1 PFAM: protein of unknown function DUF1285; KEGG: ccs:CCNA_00411 hypothetical protein YP_003591519.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_00412 CoA pyrophosphatase YP_003591520.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: ccs:CCNA_00413 poly(A) polymerase/tRNA-nucleotidyltransferase YP_003591521.1 PFAM: glutamine amidotransferase class-I; KEGG: ccr:CC_0409 glutamine amidotransferase, class-I family protein YP_003591522.1 PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0002699 probable transcriptional regulator protein, TetR family YP_003591523.1 PFAM: O-methyltransferase family 3; KEGG: cak:Caul_4857 O-methyltransferase family protein YP_003591524.1 KEGG: ccs:CCNA_00540 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_003591525.1 KEGG: cak:Caul_4519 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003591526.1 KEGG: ccs:CCNA_00542 hypothetical protein YP_003591527.1 KEGG: ccs:CCNA_00543 methyl-accepting chemotaxis protein; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein YP_003591528.1 KEGG: ccs:CCNA_00544 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003591529.1 KEGG: ccs:CCNA_00545 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003591530.1 KEGG: ccs:CCNA_00546 hypothetical protein YP_003591531.1 KEGG: ccs:CCNA_00550 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003591532.1 KEGG: ccs:CCNA_00551 hypothetical protein YP_003591533.1 PFAM: protein of unknown function DUF985; KEGG: ccs:CCNA_00552 cupin superfamily protein YP_003591534.1 KEGG: cak:Caul_0378 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase YP_003591535.1 PFAM: Methyltransferase type 11; KEGG: ccs:CCNA_00554 methyltransferase YP_003591536.1 PFAM: nitrogen regulatory protein P-II; KEGG: ccs:CCNA_00555 nitrogen regulatory protein P-II YP_003591537.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: ccs:CCNA_00556 phospholipase D YP_003591538.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ccs:CCNA_00557 endonuclease/exonuclease/phosphatase family protein YP_003591539.1 KEGG: ccs:CCNA_00558 methyltransferase; TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein YP_003591540.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: ccs:CCNA_00559 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_003591541.1 PFAM: phosphoglycerate mutase; KEGG: ccs:CCNA_00560 phosphohistidine phosphatase SixA YP_003591542.1 PFAM: protein of unknown function DUF952; KEGG: ccs:CCNA_00561 conserved cytosolic protein YP_003591543.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: ccs:CCNA_00562 dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase YP_003591544.1 PFAM: SNARE associated Golgi protein; KEGG: ccs:CCNA_00563 SNARE-associated family membrane protein YP_003591545.1 KEGG: ccs:CCNA_00564 sensory transduction protein kinase CenK; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003591546.1 KEGG: cak:Caul_3973 hypothetical protein YP_003591547.1 TIGRFAM: gamma-glutamyltransferase; KEGG: ccs:CCNA_00565 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_003591548.1 KEGG: xac:XAC0730 two-component system regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003591549.1 KEGG: ccs:CCNA_01239 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003591550.1 KEGG: pzu:PHZ_c1903 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain); PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003591551.1 PFAM: Autotransporter beta- domain protein; KEGG: ccs:CCNA_00290 autotransporter protein YP_003591552.1 KEGG: bja:blr3698 hypothetical protein YP_003591553.1 KEGG: bbt:BBta_3158 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003591554.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; KEGG: rpc:RPC_0867 flagellar hook-associated 2-like YP_003591555.1 PFAM: flagellin domain protein; KEGG: bra:BRADO4890 flagellin YP_003591556.1 PFAM: flagellar hook capping protein; KEGG: rpe:RPE_0778 flagellar hook capping protein YP_003591557.1 KEGG: bja:blr3700 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003591558.1 KEGG: art:Arth_0159 hypothetical protein YP_003591559.1 KEGG: rpb:RPB_0768 flagellar hook-associated protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein YP_003591560.1 KEGG: rpb:RPB_0769 flagellar hook-associated protein FlgL YP_003591561.1 KEGG: cak:Caul_0610 sulfate transporter/antisigma-factor antagonist STAS YP_003591562.1 KEGG: cak:Caul_0611 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003591563.1 KEGG: cak:Caul_0612 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_003591564.1 KEGG: cak:Caul_0613 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_003591565.1 KEGG: cak:Caul_0614 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003591566.1 KEGG: rlg:Rleg_3560 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003591567.1 KEGG: cak:Caul_0615 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003591568.1 KEGG: cak:Caul_0616 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_003591569.1 PFAM: MCP methyltransferase CheR-type; KEGG: cak:Caul_0617 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_003591570.1 PFAM: chemotaxis protein CheB; response regulator receiver; KEGG: cak:Caul_0618 response regulator receiver modulated chemotaxis protein CheB; SMART: response regulator receiver YP_003591571.1 KEGG: cak:Caul_0619 hypothetical protein YP_003591572.1 PFAM: ABC transporter; KEGG: ccs:CCNA_00671 teichoic acid translocation permease protein TagG YP_003591573.1 KEGG: ccs:CCNA_00670 O-antigen export system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003591574.1 PFAM: Methyltransferase type 11; KEGG: pnu:Pnuc_0321 methyltransferase type 11 YP_003591575.1 PFAM: Rhamnan synthesis F; KEGG: ccs:CCNA_00669 hypothetical protein YP_003591576.1 KEGG: ccs:CCNA_01924 capsular polysaccharide biosynthesis protein YP_003591577.1 KEGG: ccs:CCNA_00667 capsular polysaccharide biosynthesis protein YP_003591578.1 KEGG: cak:Caul_0310 hypothetical protein YP_003591579.1 KEGG: nha:Nham_2514 hypothetical protein YP_003591580.1 KEGG: mno:Mnod_7050 hypothetical protein YP_003591581.1 KEGG: rec:RHECIAT_CH0003319 hypothetical protein YP_003591582.1 manually curated; TIGRFAM: DNA mismatch endonuclease Vsr; KEGG: nha:Nham_2517 DNA mismatch endonuclease vsr; PFAM: DNA mismatch endonuclease vsr YP_003591583.1 KEGG: mno:Mnod_4984 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_003591584.1 KEGG: xca:xccb100_1065 hypothetical protein YP_003591585.1 manually curated; KEGG: cak:Caul_4179 XRE family transcriptional regulator YP_003591586.1 KEGG: cak:Caul_4180 hypothetical protein YP_003591587.1 KEGG: mka:MK0041 hypothetical protein YP_003591588.1 PFAM: integrase family protein; KEGG: mrd:Mrad2831_4162 integrase family protein YP_003591589.1 manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pla:Plav_0517 hypothetical protein; SMART: Helix-turn-helix, AraC domain YP_003591590.1 KEGG: dma:DMR_43160 proline iminopeptidase; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold YP_003591591.1 PFAM: alpha/beta hydrolase fold; KEGG: mrd:Mrad2831_4681 alpha/beta hydrolase fold YP_003591592.1 KEGG: GH21290 gene product from transcript GH21290-RA YP_003591593.1 PFAM: isochorismatase hydrolase; KEGG: stm:STM3761 inner membrane protein YP_003591594.1 KEGG: bid:Bind_2088 alpha/beta hydrolase fold; manually curated; PFAM: alpha/beta hydrolase fold YP_003591595.1 PFAM: transcriptional regulator domain protein; KEGG: rle:RL1201 transcriptional regulator YP_003591596.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_3091 TonB-dependent receptor YP_003591597.1 KEGG: oan:Oant_4519 transposase YP_003591598.1 PFAM: glycosyl hydrolase family 68; KEGG: cak:Caul_0964 levansucrase YP_003591599.1 KEGG: cak:Caul_0966 hypothetical protein YP_003591600.1 KEGG: cak:Caul_0967 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003591601.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_0968 TonB-dependent receptor YP_003591602.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: cak:Caul_0963 alpha/beta hydrolase domain-containing protein YP_003591603.1 KEGG: pzu:PHZ_c2446 esterase/lipase YP_003591604.1 PFAM: major facilitator superfamily MFS_1; KEGG: nar:Saro_1877 major facilitator transporter YP_003591605.1 PFAM: esterase; KEGG: chl:Chy400_3408 esterase YP_003591606.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: cak:Caul_0960 alpha/beta hydrolase domain-containing protein YP_003591607.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: cak:Caul_0963 alpha/beta hydrolase domain-containing protein YP_003591608.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_0968 TonB-dependent receptor YP_003591609.1 KEGG: rbi:RB2501_00961 carboxylesterase; PFAM: Carboxylesterase type B YP_003591610.1 PFAM: ROK family protein; KEGG: ccs:CCNA_01192 fructokinase YP_003591611.1 PFAM: amidohydrolase; KEGG: pzu:PHZ_c0622 amidohydrolase YP_003591612.1 KEGG: ccs:CCNA_03467 hypothetical protein YP_003591613.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c0623 TonB-dependent receptor YP_003591614.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cak:Caul_2646 TonB-dependent receptor plug YP_003591615.1 PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: cak:Caul_2647 TonB-dependent receptor YP_003591616.1 KEGG: cak:Caul_2648 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003591617.1 PFAM: FecR protein; KEGG: cak:Caul_2649 anti-FecI sigma factor, FecR YP_003591618.1 KEGG: cak:Caul_2652 hypothetical protein YP_003591619.1 KEGG: ccs:CCNA_01187 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003591620.1 PFAM: FecR protein; KEGG: ccs:CCNA_01188 FecR family protein YP_003591621.1 KEGG: ccs:CCNA_01189 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain YP_003591622.1 PFAM: PHP domain protein; KEGG: ccs:CCNA_01190 hypothetical protein YP_003591623.1 KEGG: cak:Caul_3282 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003591624.1 PFAM: FecR protein; KEGG: cak:Caul_3281 anti-FecI sigma factor, FecR YP_003591625.1 KEGG: pzu:PHZ_c2460 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain YP_003591626.1 KEGG: cja:CJA_0181 pectin methylesterase, , pme8C; PFAM: Pectinesterase YP_003591627.1 PFAM: FecR protein; KEGG: ccs:CCNA_01188 FecR family protein YP_003591628.1 KEGG: ccs:CCNA_01187 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003591629.1 PFAM: metallophosphoesterase; KEGG: dfe:Dfer_2791 metallophosphoesterase YP_003591630.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dfe:Dfer_3215 glycerophosphoryl diester phosphodiesterase YP_003591631.1 KEGG: ccs:CCNA_02466 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003591632.1 KEGG: ccs:CCNA_02467 polyisoprenylphosphate hexose-1-phosphotransferase PssZ; manually curated; PFAM: sugar transferase YP_003591633.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ccs:CCNA_02465 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003591634.1 PFAM: glycosyl transferase group 1; KEGG: rce:RC1_4005 colanic acid biosynthesis glycosyl transferase WcaI YP_003591635.1 PFAM: Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: bmj:BMULJ_04389 outer membrane autotransporter barrel YP_003591636.1 KEGG: chu:CHU_0907 colanic acid biosynthesis acetyltransferase WcaF; manually curated; PFAM: transferase hexapeptide repeat containing protein YP_003591637.1 KEGG: msl:Msil_0689 glycosyl transferase group 1; manually curated; PFAM: glycosyl transferase group 1 YP_003591638.1 KEGG: Os12g0257500; hypothetical protein YP_003591639.1 KEGG: mlo:mlr0961 glycosyltransferase YP_003591640.1 PFAM: polysaccharide biosynthesis protein; KEGG: mlo:mll5270 succinoglycan transport protein YP_003591641.1 manually curated; KEGG: rme:Rmet_5726 hexapaptide repeat-containing transferase YP_003591642.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_00471 GDP-L-fucose synthase YP_003591643.1 KEGG: ccs:CCNA_00472 GDP-mannose 4,6 dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_003591644.1 PFAM: thioesterase superfamily protein; KEGG: cak:Caul_0342 thioesterase superfamily protein YP_003591645.1 KEGG: ccs:CCNA_00483 Zn-dependent hydrolase, glyoxalase II family YP_003591646.1 KEGG: ccs:CCNA_00484 hypothetical protein YP_003591647.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ccs:CCNA_00485 ribosomal large subunit pseudouridine synthase D; SMART: RNA-binding S4 domain protein YP_003591648.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00486 TonB-dependent receptor YP_003591649.1 KEGG: cak:Caul_0348 alkaline phosphatase; PFAM: Alkaline phosphatase D-related YP_003591650.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ccs:CCNA_00488 amino acid efflux permease YP_003591651.1 KEGG: ccs:CCNA_00489 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; GnsAGnsB family protein YP_003591652.1 PFAM: protein of unknown function DUF817; KEGG: ccs:CCNA_00490 hypothetical protein YP_003591653.1 TIGRFAM: GTP cyclohydrolase I; KEGG: ccs:CCNA_00491 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_003591654.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: ccs:CCNA_00492 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_003591655.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: smt:Smal_1809 3-ketoacyl-(acyl-carrier-protein) reductase YP_003591656.1 PFAM: cyclase/dehydrase; KEGG: ccs:CCNA_00493 polyketide cyclase-dehydrase/lipid transport protein YP_003591657.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: ccs:CCNA_00494 transport protein YP_003591658.1 KEGG: ccs:CCNA_00495 cytosolic protein; manually curated; PFAM: protein of unknown function DUF37 YP_003591659.1 KEGG: ccs:CCNA_00496 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein YP_003591660.1 PFAM: glycosyl transferase family 2; KEGG: ccs:CCNA_00497 rhamnosyl transferase YP_003591661.1 KEGG: ccs:CCNA_00499 hypothetical protein YP_003591662.1 PFAM: pyruvate carboxyltransferase; KEGG: ccs:CCNA_00500 hydroxymethylglutaryl-CoA lyase YP_003591663.1 PFAM: glycosyl transferase family 39; KEGG: ccs:CCNA_00501 glucosyltransferase YP_003591664.1 PFAM: glycosyl transferase family 2; KEGG: ccs:CCNA_00502 glycosyl transferase family protein YP_003591665.1 KEGG: ccs:CCNA_00503 hypothetical protein YP_003591666.1 KEGG: ccs:CCNA_00504 23S rRNA methyltransferase; manually curated; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_003591667.1 TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; KEGG: cak:Caul_0701 ubiquinol-cytochrome C reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain YP_003591668.1 PFAM: Cytochrome b/b6 domain; KEGG: ccs:CCNA_00506 cytochrome b YP_003591669.1 PFAM: cytochrome C1; KEGG: cak:Caul_0703 cytochrome C1 YP_003591670.1 KEGG: ccs:CCNA_00508 hypothetical protein YP_003591671.1 KEGG: sde:Sde_3064 transglutaminase-like YP_003591672.1 KEGG: mmr:Mmar10_0373 hypothetical protein YP_003591673.1 PFAM: dienelactone hydrolase; KEGG: ccs:CCNA_00510 carboxymethylenebutenolidase YP_003591674.1 KEGG: ccr:CC_0478 dienelactone hydrolase, PFAM: dienelactone hydrolase YP_003591675.1 KEGG: ccs:CCNA_00512 GTP-binding protein, probable translation factor; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related YP_003591676.1 PFAM: Pirin domain protein; KEGG: ccs:CCNA_00514 pirin YP_003591677.1 KEGG: cak:Caul_4330 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003591678.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold domain protein; ATP-binding region ATPase domain protein; KEGG: cak:Caul_4331 signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_003591679.1 PFAM: alpha/beta hydrolase fold; KEGG: gym:GYMC10_6211 alpha/beta hydrolase YP_003591680.1 PFAM: Tetratricopeptide TPR_4; KEGG: ccs:CCNA_00516 integral membrane protein YP_003591681.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: ccs:CCNA_00517 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003591682.1 KEGG: ccs:CCNA_00518 LSU ribosomal protein L25P; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_003591683.1 KEGG: ccs:CCNA_00519 hypothetical protein YP_003591684.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: ccs:CCNA_00520 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003591685.1 PFAM: protein of unknown function DUF152; KEGG: ccs:CCNA_00523 multicopper polyphenol oxidase YP_003591686.1 PFAM: protein of unknown function DUF185; KEGG: ccs:CCNA_00524 conserved cytosolic protein YP_003591687.1 KEGG: ccs:CCNA_00525 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_003591688.1 PFAM: protein of unknown function DUF526; KEGG: ccs:CCNA_00526 hypothetical protein YP_003591689.1 PFAM: Protein of unknown function DUF1790; KEGG: ccs:CCNA_00527 hypothetical protein YP_003591690.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: ccs:CCNA_00528 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003591691.1 KEGG: ccs:CCNA_00529 hypothetical protein YP_003591692.1 KEGG: ccs:CCNA_03027 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003591693.1 KEGG: ccs:CCNA_03026 two-component response regulator PetR; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003591694.1 KEGG: ccs:CCNA_03025 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003591695.1 KEGG: ccs:CCNA_03024 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003591697.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ccs:CCNA_01463 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA YP_003591698.1 KEGG: rce:RC1_0945 TonB-dependent siderophore receptor, TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003591699.1 PFAM: PepSY-associated TM helix domain protein; KEGG: rce:RC1_0946 PepSY-associated membrane protein YP_003591700.1 KEGG: cak:Caul_2996 acid phosphatase YP_003591701.1 KEGG: ccs:CCNA_03019 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003591702.1 KEGG: ccs:CCNA_03013 peroxiredoxin reductase (NAD(P)H)/NADH oxidase H2O2-forming; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003591703.1 TIGRFAM: peroxiredoxin; KEGG: ccs:CCNA_03012 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_003591704.1 KEGG: ccs:CCNA_00416 hypothetical protein YP_003591705.1 manually curated; KEGG: ccs:CCNA_00417 hypothetical protein YP_003591706.1 KEGG: ccs:CCNA_00419 fasciclin domain cell surface protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_003591707.1 KEGG: ccs:CCNA_00420 hypothetical protein YP_003591708.1 KEGG: ccs:CCNA_00421 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_003591709.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00422 3-oxoacyl-(acyl-carrier protein) reductase YP_003591710.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_00423 phosphohydrolase, MutT-NUDIX family YP_003591711.1 PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_00424 aldehyde dehydrogenase YP_003591712.1 KEGG: ara:Arad_2333 hypothetical protein YP_003591713.1 KEGG: aba:Acid345_4431 PEGA domain-containing protein YP_003591714.1 KEGG: ccs:CCNA_00427 hypothetical protein YP_003591715.1 KEGG: ccs:CCNA_00428 hypothetical protein YP_003591716.1 KEGG: vap:Vapar_1318 hypothetical protein YP_003591717.1 PFAM: Methyltransferase regulatory domain, predicted; Methyltransferase type 11; KEGG: ccs:CCNA_03449 methyltransferase YP_003591718.1 KEGG: ccs:CCNA_03447 hypothetical protein YP_003591719.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_03446 feruloyl-CoA synthetase YP_003591720.1 PFAM: peptidase M28; KEGG: ccs:CCNA_03445 aminopeptidase YP_003591721.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03444 TonB-dependent receptor YP_003591722.1 PFAM: protein of unknown function UPF0061; KEGG: cak:Caul_4337 hypothetical protein YP_003591723.1 KEGG: ccs:CCNA_03439 hypothetical protein YP_003591724.1 PFAM: polysaccharide deacetylase; KEGG: cak:Caul_2724 hypothetical protein YP_003591725.1 PFAM: glycosyl transferase family 2; KEGG: cak:Caul_2725 glycosyl transferase family protein YP_003591726.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cak:Caul_2726 TonB-dependent receptor plug YP_003591727.1 PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR YP_003591728.1 KEGG: pzu:PHZ_c2233 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003591729.1 PFAM: Aldose 1-epimerase; KEGG: ccs:CCNA_03432 aldose 1-epimerase YP_003591730.1 KEGG: ccs:CCNA_03431 membrane-bound lytic murein transglycosylase B; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein YP_003591731.1 KEGG: ccs:CCNA_03430 LSU ribosomal protein L36P; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_003591732.1 KEGG: ccs:CCNA_03429 hydrolase (HAD superfamily); TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003591733.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: cak:Caul_0875 6-phosphogluconate dehydrogenase NAD-binding YP_003591734.1 PFAM: Protein of unknown function DUF2312; KEGG: ccs:CCNA_03428 cytosolic protein YP_003591735.1 KEGG: cak:Caul_0877 hypothetical protein YP_003591736.1 KEGG: ccs:CCNA_03426 hypothetical protein YP_003591737.1 KEGG: ccs:CCNA_03425 hypothetical protein YP_003591738.1 KEGG: ccs:CCNA_03424 AAA-family response regulator TacA; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_003591739.1 PFAM: protein of unknown function DUF661; KEGG: ccs:CCNA_03423 hypothetical protein YP_003591740.1 KEGG: ccs:CCNA_03422 oligoendopeptidase F; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F YP_003591741.1 PFAM: ABC-1 domain protein; KEGG: ccs:CCNA_03421 2-polyprenylphenol 6-hydroxylase accessory protein UbiB YP_003591742.1 KEGG: ccs:CCNA_03420 hypothetical protein YP_003591743.1 KEGG: ccs:CCNA_03419 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003591744.1 PFAM: thioesterase superfamily protein; KEGG: ccs:CCNA_03418 thioesterase superfamily protein YP_003591745.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_03417 hydrolase YP_003591746.1 PFAM: glycosyl transferase family 9; KEGG: ccs:CCNA_03416 glycosyltransferase family 9 protein YP_003591747.1 PFAM: aa3 type cytochrome C oxidase subunit IV; KEGG: ccs:CCNA_03415 hypothetical protein YP_003591748.1 KEGG: ccs:CCNA_03414 NAD(P) transhydrogenase alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein YP_003591749.1 KEGG: ccs:CCNA_03413 NAD(P) transhydrogenase alpha subunit YP_003591750.1 KEGG: ccs:CCNA_03412 NAD(P) transhydrogenase subunit beta; PFAM: NAD(P) transhydrogenase beta subunit YP_003591751.1 KEGG: cak:Caul_1746 hypothetical protein YP_003591752.1 PFAM: Peptidase M23; KEGG: ccs:CCNA_03410 peptidoglycan-specific endopeptidase, M23 family YP_003591753.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_03409 hydrolase YP_003591754.1 KEGG: ccs:CCNA_03406 SSU ribosomal protein S21P; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_003591755.1 KEGG: ccs:CCNA_03405 hypothetical protein; TIGRFAM: rpsU-divergently transcribed protein; PFAM: COQ9 domain protein YP_003591756.1 PFAM: protein of unknown function DUF1465; KEGG: ccs:CCNA_03404 regulator of CtrA degradation RcdA YP_003591757.1 PFAM: protein of unknown function DUF1192; KEGG: ccs:CCNA_03403 hypothetical protein YP_003591758.1 KEGG: ccs:CCNA_03402 quinone oxidoreductase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003591759.1 PFAM: protein of unknown function DUF1013; KEGG: ccs:CCNA_03401 cytosolic protein YP_003591760.1 PFAM: protein of unknown function DUF465; KEGG: cak:Caul_0911 hypothetical protein YP_003591761.1 KEGG: ccs:CCNA_03399 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_003591762.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_03398 hypothetical protein YP_003591763.1 PFAM: protein of unknown function DUF465; KEGG: ccs:CCNA_03397 cytosolic protein YP_003591764.1 KEGG: ccs:CCNA_03395 two-component receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003591765.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ccs:CCNA_03394 two-component response regulator; SMART: GGDEF domain containing protein YP_003591766.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: ccs:CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_003591767.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ccs:CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003591768.1 KEGG: dac:Daci_0853 acyltransferase 3; manually curated; PFAM: acyltransferase 3 YP_003591769.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00329 ribosomal-protein-alanine acetyltransferase YP_003591770.1 KEGG: ccs:CCNA_03391 transcriptional regulator, Cro/CI family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003591771.1 KEGG: ccs:CCNA_03390 hypothetical protein YP_003591772.1 KEGG: ccs:CCNA_03389 lantibiotic transport ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003591773.1 KEGG: ccs:CCNA_03388 lantibiotic export permease protein YP_003591774.1 KEGG: ccs:CCNA_03387 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003591775.1 KEGG: cak:Caul_4715 alpha-1,2-mannosidase; TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92 YP_003591776.1 KEGG: ccs:CCNA_03386 multimodular transpeptidase-transglycosylase PBP 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003591777.1 PFAM: protein of unknown function UPF0153; KEGG: ccs:CCNA_03385 cytosolic protein YP_003591778.1 TIGRFAM: ribosomal protein L31; KEGG: ccs:CCNA_03384 LSU ribosomal protein L31P YP_003591779.1 TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ccs:CCNA_03383 multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein; SMART: AAA ATPase YP_003591780.1 KEGG: cak:Caul_0919 hypothetical protein YP_003591781.1 KEGG: ccs:CCNA_03382 cytosolic protein YP_003591782.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ccs:CCNA_03381 glycerophosphoryl diester phosphodiesterase YP_003591783.1 PFAM: inositol monophosphatase; KEGG: ccs:CCNA_03378 myo-inositol-1(or 4)-monophosphatase YP_003591784.1 KEGG: ccs:CCNA_03374 hypothetical protein YP_003591785.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: ccs:CCNA_03373 thiamin-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003591786.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ccs:CCNA_03372 bacterioferritin-associated ferredoxin YP_003591787.1 KEGG: ccs:CCNA_03371 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein YP_003591788.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_03370 acetyltransferase YP_003591789.1 KEGG: cak:Caul_1640 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003591790.1 PFAM: DoxX family protein; KEGG: ccs:CCNA_03366 DoxX family protein YP_003591791.1 PFAM: Protein of unknown function DUF2063; KEGG: ccs:CCNA_03365 hypothetical protein YP_003591792.1 PFAM: protein of unknown function DUF692; KEGG: cak:Caul_0757 hypothetical protein YP_003591793.1 PFAM: Protein of unknown function DUF2282, transmembrane; KEGG: ccs:CCNA_03363 hypothetical protein YP_003591794.1 KEGG: ccs:CCNA_03362 ECF-family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003591795.1 PFAM: protein of unknown function DUF1109; KEGG: ccs:CCNA_03273 ECF-family RNA polymerase sigma factor YP_003591796.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: ccs:CCNA_03360 fructose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003591797.1 KEGG: cak:Caul_0766 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003591798.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cak:Caul_0767 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003591799.1 KEGG: ccs:CCNA_03357 hypothetical protein YP_003591800.1 PFAM: protein of unknown function DUF710; KEGG: ccs:CCNA_03356 cytosolic protein YP_003591801.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ccs:CCNA_03355 acylamino-acid-releasing enzyme YP_003591802.1 KEGG: ccs:CCNA_03354 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_003591803.1 PFAM: metallophosphoesterase; KEGG: ccs:CCNA_03353 hypothetical protein YP_003591804.1 KEGG: cak:Caul_0778 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_003591805.1 PFAM: protein of unknown function DUF28; KEGG: ccs:CCNA_03352 cytosolic protein YP_003591806.1 PFAM: MgtC/SapB transporter; KEGG: pzu:PHZ_c3070 Mg++ transport associated protein, MgtC YP_003591807.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: cak:Caul_0782 inosine/uridine-preferring nucleoside hydrolase YP_003591808.1 KEGG: similar to Coiled-coil domain-containing protein 102A YP_003591809.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: ccs:CCNA_03346 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003591810.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: ccs:CCNA_03344 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_003591811.1 KEGG: ccs:CCNA_03343 hypothetical protein YP_003591812.1 KEGG: ccs:CCNA_03342 short-chain acyl-CoA hydrolase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein YP_003591813.1 KEGG: ccs:CCNA_03341 TolQ protein; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_003591814.1 KEGG: ccs:CCNA_03340 TolR protein; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR YP_003591815.1 KEGG: ccs:CCNA_03339 TolA protein YP_003591816.1 KEGG: ccs:CCNA_03338 TolB protein; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller YP_003591817.1 KEGG: ccs:CCNA_03337 peptidoglycan-associated lipoprotein pal; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_003591818.1 TIGRFAM: tol-pal system protein YbgF; KEGG: ccs:CCNA_03336 Tol system periplasmic component YbgF YP_003591819.1 KEGG: ccs:CCNA_03335 PP-loop family cell cycle control ATPase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein YP_003591820.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: ccs:CCNA_03334 cell division protein FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular YP_003591821.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; KEGG: ccs:CCNA_03333 PAS-family sensor histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003591822.1 TIGRFAM: dihydropteroate synthase; KEGG: ccs:CCNA_03332 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003591823.1 KEGG: ccs:CCNA_03331 phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_003591824.1 PFAM: protein of unknown function DUF925; KEGG: ccs:CCNA_03330 hypothetical protein YP_003591825.1 KEGG: ccs:CCNA_03328 epimerase; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_003591826.1 KEGG: ccs:CCNA_03327 hypothetical protein YP_003591827.1 KEGG: ccs:CCNA_03326 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003591828.1 KEGG: cak:Caul_4470 hypothetical protein YP_003591829.1 KEGG: cak:Caul_4469 hypothetical protein YP_003591830.1 TIGRFAM: phosphoserine aminotransferase; KEGG: ccs:CCNA_03323 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_003591831.1 KEGG: ccs:CCNA_03322 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_003591832.1 PFAM: VanZ family protein; KEGG: ccs:CCNA_03321 hypothetical protein YP_003591833.1 KEGG: ccs:CCNA_03318 cytosolic protein YP_003591834.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: ccs:CCNA_03317 DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_003591835.1 KEGG: dac:Daci_0766 von Willebrand factor type A YP_003591836.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_00970 long-chain-fatty-acid--CoA ligase YP_003591837.1 KEGG: ccs:CCNA_00969 two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003591838.1 PFAM: beta-lactamase; KEGG: sus:Acid_1314 beta-lactamase YP_003591839.1 PFAM: aminoglycoside phosphotransferase; KEGG: ccs:CCNA_00968 gluconate kinase YP_003591840.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_00967 transcriptional regulator, TetR family YP_003591841.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: ccs:CCNA_03139 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003591842.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ccs:CCNA_03140 transcriptional regulator, LysR family protein YP_003591843.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: ccs:CCNA_03316 UDP-N-acetylglucosamine 4,6-dehydratase/UDP-D-quinovosamine 4-dehydrogenase YP_003591844.1 KEGG: ccs:CCNA_03315 molybdopterin biosynthesis MoeA protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_003591845.1 KEGG: ccs:CCNA_03314 ferredoxin-NADP reductase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein YP_003591846.1 KEGG: ccs:CCNA_03313 hypothetical protein YP_003591847.1 KEGG: ccs:CCNA_03312 hypothetical protein YP_003591848.1 KEGG: ccs:CCNA_03311 protein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_003591849.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: ccs:CCNA_03310 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein YP_003591850.1 KEGG: azc:AZC_4518 hypothetical protein YP_003591851.1 KEGG: ccs:CCNA_00927 hypothetical protein YP_003591852.1 PFAM: beta-lactamase; KEGG: ccs:CCNA_01570 penicillin-binding protein YP_003591853.1 KEGG: ccs:CCNA_02780 hypothetical protein YP_003591854.1 KEGG: ccs:CCNA_02781 hypothetical protein YP_003591855.1 PFAM: KAP P-loop domain protein; KEGG: swi:Swit_3481 kap P-loop domain-containing protein YP_003591856.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: cak:Caul_4435 ribosomal protein L11; SMART: ribosomal protein L11 YP_003591857.1 KEGG: ccs:CCNA_00677 LSU ribosomal protein L1P; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_003591858.1 PFAM: HI0933 family protein; KEGG: ccs:CCNA_00674 NAD(FAD)-utilizing dehydrogenase YP_003591859.1 PFAM: histidine triad (HIT) protein; KEGG: cak:Caul_0788 histidine triad (HIT) protein YP_003591860.1 PFAM: ribosomal protein L10; KEGG: ccs:CCNA_00530 LSU ribosomal protein L10P YP_003591861.1 KEGG: ccs:CCNA_00531 LSU ribosomal protein L12P (L7/L12); TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_003591862.1 PFAM: alpha/beta hydrolase fold; KEGG: vap:Vapar_6338 alpha/beta hydrolase YP_003591863.1 KEGG: cak:Caul_3762 signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003591864.1 KEGG: ccs:CCNA_00534 hypothetical protein YP_003591865.1 KEGG: ccs:CCNA_00535 hypothetical protein YP_003591866.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; KEGG: ccs:CCNA_00536 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_003591867.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: ccs:CCNA_00537 DNA-directed RNA polymerase beta' chain; SMART: RNA polymerase I subunit A domain protein YP_003591868.1 KEGG: pzu:PHZ_c2496 hypothetical protein YP_003591869.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: app:CAP2UW1_0685 protein of unknown function DUF883 ElaB YP_003591870.1 KEGG: xac:XAC0144 TonB-dependent receptor YP_003591871.1 KEGG: acr:Acry_2144 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003591872.1 PFAM: Protein of unknown function DUF2269, transmembrane; KEGG: ccs:CCNA_02992 hypothetical protein YP_003591873.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpl:BURPS1106A_A2577 LysR family transcriptional regulator YP_003591874.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rso:RSc3335 hypothetical protein YP_003591875.1 manually curated; KEGG: ccs:CCNA_03309 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_003591876.1 KEGG: ccs:CCNA_03308 hypothetical protein YP_003591877.1 KEGG: ccs:CCNA_03306 SSU ribosomal protein S12P; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_003591878.1 KEGG: ccs:CCNA_03305 SSU ribosomal protein S7P; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_003591879.1 KEGG: ccs:CCNA_03304 protein translation elongation factor G (EF-G); TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein YP_003591880.1 KEGG: ccs:CCNA_03303 protein translation elongation factor Tu (EF-Tu); TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein YP_003591881.1 PFAM: esterase; KEGG: csa:Csal_2538 esterase YP_003591882.1 KEGG: sml:Smlt2956 hypothetical protein YP_003591883.1 KEGG: bmj:BMULJ_01238 catalase; PFAM: Catalase related subgroup; Catalase domain protein YP_003591884.1 KEGG: ccs:CCNA_03302 nitrate/nitrite sensor histidine kinase NarX; PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003591885.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rlt:Rleg2_0598 GCN5-related N-acetyltransferase YP_003591886.1 PFAM: acriflavin resistance protein; KEGG: ccs:CCNA_03301 cation/multidrug efflux pump AcrB YP_003591887.1 KEGG: ccs:CCNA_03300 multidrug resistance efflux pump, periplasmic component; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003591888.1 KEGG: ccs:CCNA_03299 outer membrane protein OprM; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003591889.1 PFAM: Domain of unknown function DUF1794; KEGG: cak:Caul_1406 hypothetical protein YP_003591890.1 KEGG: ccs:CCNA_03297 hypothetical protein YP_003591891.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_03296 transcriptional regulator, TetR family YP_003591893.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; KEGG: ccs:CCNA_03295 PAS-family sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003591894.1 PFAM: beta-lactamase; KEGG: ccs:CCNA_03294 beta-lactamase family protein YP_003591895.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_03293 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase YP_003591896.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_03292 long-chain-fatty-acid--CoA ligase YP_003591897.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ccs:CCNA_03291 hypothetical protein YP_003591898.1 PFAM: Protein of unknown function DUF2199; KEGG: ccs:CCNA_03290 hypothetical protein YP_003591899.1 KEGG: ccs:CCNA_03285 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_003591900.1 TIGRFAM: adenosine deaminase; KEGG: ccs:CCNA_03284 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_003591901.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gdi:GDI_2671 LysR family transcriptional regulator YP_003591902.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_0993 short-chain dehydrogenase/reductase SDR YP_003591903.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL3778 short-chain dehydrogenase/reductase YP_003591904.1 PFAM: Pirin domain protein; KEGG: ccs:CCNA_03282 pirin YP_003591905.1 PFAM: major facilitator superfamily MFS_1; KEGG: pzu:PHZ_c0730 major facilitator family transporter YP_003591906.1 KEGG: ccs:CCNA_03281 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type-like; LexA DNA-binding domain protein; SMART: Transcription regulator, AsnC-type YP_003591907.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: ccs:CCNA_03280 pyruvate ferredoxin/flavodoxin oxidoreductase family protein YP_003591908.1 PFAM: protein of unknown function DUF418; protein of unknown function DUF405; KEGG: cak:Caul_0371 hypothetical protein YP_003591909.1 PFAM: FAD dependent oxidoreductase; KEGG: ccs:CCNA_03278 aminobutyraldehyde dehydrogenase YP_003591910.1 PFAM: glycosyl transferase group 1; KEGG: ccs:CCNA_03277 glycosyltransferase YP_003591911.1 manually curated; KEGG: bte:BTH_II1355 hypothetical protein YP_003591912.1 KEGG: bte:BTH_II1354 hypothetical protein; manually curated; PFAM: protein of unknown function DUF497 YP_003591913.1 KEGG: cak:Caul_1693 hypothetical protein YP_003591914.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ccs:CCNA_03276 glycerophosphoryl diester phosphodiesterase YP_003591915.1 KEGG: cak:Caul_4035 mannosyl-oligosaccharide 1,2-alpha-mannosidase; PFAM: glycosyl hydrolase family 47 YP_003591916.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-4 domain protein; PAS fold domain protein; KEGG: ccs:CCNA_03272 two-component sensor histidine kinase; SMART: PAS domain containing protein YP_003591917.1 KEGG: ccs:CCNA_03270 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_003591918.1 TIGRFAM: methionine gamma-lyase; KEGG: ccs:CCNA_03271 methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003591919.1 PFAM: type IV pilus assembly PilZ; KEGG: ccs:CCNA_03268 diguanylate receptor protein DgrB YP_003591920.1 KEGG: ccs:CCNA_03267 transcriptional regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003591921.1 KEGG: ccs:CCNA_03265 CBS pair-family sensor histidine kinase/receiver domain protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein YP_003591922.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03263 TonB-dependent receptor YP_003591923.1 KEGG: ccs:CCNA_03262 queuosine biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_003591924.1 PFAM: Radical SAM domain protein; KEGG: ccs:CCNA_03261 queuosine biosynthesis protein QueE YP_003591925.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: ccs:CCNA_03260 queuosine biosynthesis protein QueD YP_003591926.1 KEGG: ccs:CCNA_03258 hypothetical protein YP_003591927.1 KEGG: ccs:CCNA_03257 chemotaxis receiver domain protein cheYIII; PFAM: response regulator receiver; SMART: response regulator receiver YP_003591928.1 TIGRFAM: chorismate synthase; KEGG: ccs:CCNA_03256 chorismate synthase; PFAM: chorismate synthase YP_003591929.1 PFAM: peptidase M56 BlaR1; KEGG: ccs:CCNA_03253 hypothetical protein YP_003591930.1 PFAM: peptidase M56 BlaR1; KEGG: ccs:CCNA_03253 hypothetical protein YP_003591931.1 PFAM: Penicillinase repressor; KEGG: ccs:CCNA_03252 transcriptional regulatory protein YP_003591932.1 KEGG: cak:Caul_4485 hypothetical protein YP_003591933.1 KEGG: ccr:CC_3149 MarR family transcriptional regulator; PFAM: regulatory protein MarR; GCN5-related N-acetyltransferase; SMART: regulatory protein MarR; regulatory protein ArsR YP_003591934.1 manually curated; PFAM: EAL domain protein; KEGG: ccs:CCNA_03250 EAL-domain diguanylate phosphodiesterase; SMART: EAL domain protein YP_003591935.1 PFAM: aminotransferase class-III; KEGG: ccs:CCNA_03245 omega-amino acid-pyruvate aminotransferase YP_003591936.1 KEGG: ccs:CCNA_03244 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003591937.1 PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_03243 aldehyde dehydrogenase YP_003591938.1 KEGG: cak:Caul_3954 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003591939.1 PFAM: aminotransferase class-III; KEGG: ccs:CCNA_03241 glutamate-1-semialdehyde 2,1-aminomutase YP_003591940.1 KEGG: ccs:CCNA_03240 glutamine synthetase; PFAM: glutamine synthetase catalytic region YP_003591941.1 PFAM: extracellular solute-binding protein family 1; KEGG: ccs:CCNA_03239 spermidine/putrescine-binding protein YP_003591942.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ccs:CCNA_03238 transporter YP_003591943.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ccs:CCNA_03236 spermidine/putrescine transport system permease protein PotC YP_003591944.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: ccs:CCNA_03235 spermidine/putrescine transport ATP-binding protein PotA; SMART: AAA ATPase YP_003591945.1 KEGG: ccs:CCNA_03234 glutamine amidotransferase, class I; PFAM: peptidase C26 YP_003591946.1 PFAM: aminotransferase class-III; KEGG: ccs:CCNA_03233 gamma-aminobutyrate aminotransferase YP_003591947.1 KEGG: ccs:CCNA_03230 glutamine synthetase; PFAM: glutamine synthetase catalytic region YP_003591948.1 PFAM: FAD dependent oxidoreductase; KEGG: ccs:CCNA_03229 FAD dependent oxidoreductase YP_003591949.1 manually curated; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; sulfotransferase; KEGG: ccs:CCNA_03228 tetratricopeptide repeat family protein; SMART: Tetratricopeptide repeat YP_003591950.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03227 TonB-dependent receptor YP_003591951.1 KEGG: ccs:CCNA_03226 arginine/agmatin antiporter; manually curated; PFAM: amino acid permease-associated region YP_003591952.1 PFAM: amidohydrolase; KEGG: ccs:CCNA_03225 parathion hydrolase YP_003591953.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03549 TonB-dependent receptor YP_003591954.1 KEGG: ccs:CCNA_03224 hypothetical protein YP_003591955.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_03223 transcriptional regulator, TetR family YP_003591956.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ccs:CCNA_03222 ring hydroxylating dioxygenase, alpha-subunit YP_003591957.1 PFAM: FAD dependent oxidoreductase; KEGG: ccs:CCNA_03221 phytoene dehydrogenase YP_003591958.1 PFAM: acriflavin resistance protein; KEGG: ccs:CCNA_03219 cation/multidrug efflux pump acrB5 YP_003591959.1 KEGG: ccs:CCNA_03218 periplasmic multidrug efflux lipoprotein precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003591960.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_03217 transcriptional regulator, TetR family YP_003591961.1 KEGG: ccs:CCNA_03216 hypothetical protein YP_003591962.1 KEGG: nha:Nham_0707 hypothetical protein YP_003591963.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmb:Mmol_0009 short-chain dehydrogenase/reductase SDR YP_003591964.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_1707 transcriptional regulator YP_003591965.1 KEGG: ccs:CCNA_03215 ARO8 family aminotransferase/HTH DNA-binding protein; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003591966.1 PFAM: protein of unknown function DUF983; KEGG: ccs:CCNA_03214 hypothetical protein YP_003591967.1 KEGG: rha:RHA1_ro01000 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_003591968.1 KEGG: oca:OCAR_4942 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003591969.1 KEGG: ccs:CCNA_03213 polyhydroxyalkanoic acid system protein YP_003591970.1 KEGG: ccs:CCNA_03212 hypothetical protein YP_003591971.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ccs:CCNA_03211 L-Ala-D/L-Glu racemase YP_003591972.1 PFAM: helix-turn-helix HxlR type; KEGG: ccs:CCNA_03210 transcriptional regulator, MarR family YP_003591973.1 KEGG: ccs:CCNA_03209 acetyl-coenzyme A synthetase YP_003591974.1 PFAM: protein of unknown function DUF1295; KEGG: ccs:CCNA_03208 hypothetical protein YP_003591975.1 PFAM: protein of unknown function DUF72; KEGG: ccs:CCNA_03207 hypothetical protein YP_003591976.1 TIGRFAM: L-serine dehydratase 1; KEGG: ccs:CCNA_03206 L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_003591977.1 PFAM: peptidase M28; KEGG: cak:Caul_0655 peptidase M28 YP_003591978.1 PFAM: alanine racemase domain protein; KEGG: ccs:CCNA_03204 alanine racemase YP_003591979.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ccs:CCNA_03203 threo-3-hydroxyaspartate ammonia-lyase YP_003591980.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: ccs:CCNA_03202 hypothetical protein YP_003591981.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: ccs:CCNA_03201 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_003591982.1 KEGG: cak:Caul_0659 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003591983.1 KEGG: ccs:CCNA_03199 hypothetical protein YP_003591984.1 KEGG: ccs:CCNA_03198 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_003591985.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sal:Sala_3125 TonB-dependent receptor YP_003591986.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_03197 alpha/beta hydrolase family protein YP_003591987.1 KEGG: ccs:CCNA_03195 RNA polymerase sigma-32 factor; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_003591988.1 PFAM: membrane protein of unknown function; KEGG: ccs:CCNA_03194 integral membrane protein YP_003591989.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: ccs:CCNA_03191 sensory box/GGDEF family protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003591990.1 KEGG: ccs:CCNA_03190 low-specificity L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003591991.1 KEGG: ccs:CCNA_03188 epoxide hydrolase; PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold YP_003591992.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cak:Caul_4262 hypothetical protein YP_003591993.1 KEGG: ccs:CCNA_03186 hypothetical protein YP_003591994.1 KEGG: ccs:CCNA_03164 protein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_003591995.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ccs:CCNA_03163 peptidyl-prolyl cis-trans isomerase YP_003591996.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: ccs:CCNA_03162 glutamate N-acetyltransferase/amino-acid acetyltransferase; PFAM: arginine biosynthesis protein ArgJ YP_003591997.1 KEGG: ccs:CCNA_00867 hypothetical protein YP_003591998.1 KEGG: cak:Caul_1201 hypothetical protein YP_003591999.1 KEGG: pzu:PHZ_c2479 hypothetical protein YP_003592000.1 KEGG: ccs:CCNA_00881 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003592001.1 KEGG: ccs:CCNA_00880 hypothetical protein YP_003592002.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; KEGG: ccs:CCNA_00879 PAS-family sensor histidine kinase; SMART: PAC repeat-containing protein; PAS domain containing protein YP_003592003.1 KEGG: ccs:CCNA_00878 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003592004.1 KEGG: rme:Rmet_5654 dehydrogenase YP_003592005.1 KEGG: ccs:CCNA_00876 7,8-dihydro-8-oxoguanine-triphosphatase; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase YP_003592006.1 PFAM: Methyltransferase type 11; KEGG: ccs:CCNA_00874 biotin synthesis protein BioC YP_003592007.1 KEGG: ccr:CC_0830 competence protein F; manually curated; PFAM: phosphoribosyltransferase YP_003592008.1 KEGG: ccs:CCNA_00872 glutaredoxin; TIGRFAM: glutaredoxin; PFAM: glutaredoxin YP_003592009.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cak:Caul_0941 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003592010.1 PFAM: protein of unknown function DUF1178; KEGG: ccs:CCNA_00870 cytosolic protein YP_003592011.1 KEGG: pzu:PHZ_c2219 hypothetical protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003592012.1 KEGG: aba:Acid345_0898 alpha-glucosidase; PFAM: glycosyl hydrolase family 31 YP_003592013.1 PFAM: Lipocalin family protein; KEGG: ccs:CCNA_03011 outer membrane lipoprotein Blc YP_003592014.1 PFAM: 17 kDa surface antigen; KEGG: cak:Caul_0943 17 kDa surface antigen YP_003592015.1 PFAM: 17 kDa surface antigen; KEGG: ccs:CCNA_00882 hypothetical protein YP_003592016.1 PFAM: FG-GAP repeat protein; KEGG: ank:AnaeK_2861 glycosyl transferase, WecB/TagA/CpsF family YP_003592017.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: ccs:CCNA_00883 3-demethylubiquinone 3-methyltransferase; PFAM: Methyltransferase type 11 YP_003592018.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: ccs:CCNA_00886 aspartokinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003592019.1 KEGG: ccs:CCNA_00887 hypothetical protein YP_003592020.1 KEGG: rso:RSc0234 transcription regulator protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003592021.1 KEGG: ccs:CCNA_00889 hypothetical protein YP_003592022.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccs:CCNA_00891 transporter, drug/metabolite exporter family YP_003592023.1 KEGG: cak:Caul_0953 hypothetical protein YP_003592024.1 SMART: GAF domain protein; manually curated; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: ccs:CCNA_00892 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003592025.1 SMART: helix-turn-helix domain protein; KEGG: ccs:CCNA_00893 transcriptional regulatory protein YP_003592026.1 TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; KEGG: ccs:CCNA_00894 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_003592027.1 KEGG: sal:Sala_2321 hypothetical protein YP_003592028.1 PFAM: peptidase S41; KEGG: ccs:CCNA_00686 peptidase family S41 protein YP_003592029.1 KEGG: xcb:XC_4163 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003592030.1 PFAM: amino acid-binding ACT domain protein; KEGG: ccs:CCNA_03141 phosphoserine phosphatase YP_003592031.1 KEGG: SNF2 superfamily protein YP_003592032.1 KEGG: rru:Rru_A0562 peptidase S1 and S6, chymotrypsin/Hap YP_003592033.1 KEGG: ccs:CCNA_00897 hypothetical protein YP_003592034.1 KEGG: rci:RCIX210 hypothetical protein YP_003592035.1 KEGG: hypothetical protein YP_003592036.1 KEGG: ccs:CCNA_00898 ribosomal large subunit pseudouridine synthase F; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_003592037.1 manually curated; TIGRFAM: peptide chain release factor 1; KEGG: ccr:CC_0856 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_003592038.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; CHASE4 domain protein; KEGG: ccs:CCNA_00900 CHASE4-family GGDEF/EAL protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003592039.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_1672 TonB-dependent receptor YP_003592040.1 PFAM: Domain of unknown function DUF1801; KEGG: bte:BTH_II1623 hypothetical protein YP_003592041.1 PFAM: Ferritin Dps family protein; KEGG: ccs:CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase YP_003592042.1 PFAM: cell wall hydrolase SleB; KEGG: ccs:CCNA_02965 cell wall hydrolase family protein YP_003592043.1 KEGG: ccs:CCNA_02964 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003592044.1 KEGG: bja:bll7770 ABC transporter permease protein YP_003592045.1 TIGRFAM: pseudaminic acid synthase; KEGG: ccs:CCNA_02961 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein YP_003592046.1 PFAM: NUDIX hydrolase; KEGG: smd:Smed_2282 NUDIX hydrolase YP_003592047.1 KEGG: ccs:CCNA_02959 Zn-dependent hydrolase, glyoxalase II family YP_003592048.1 KEGG: ccs:CCNA_02957 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003592049.1 KEGG: ccs:CCNA_02956 rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003592050.1 PFAM: protein of unknown function DUF81; KEGG: ccs:CCNA_02955 permease YP_003592051.1 TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; KEGG: ccs:CCNA_02947 SpsG-related polysaccharide biosynthesis protein YP_003592052.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: ccs:CCNA_02946 SpsF-related cytidylyltransferase YP_003592053.1 PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_4290 glutathione S-transferase YP_003592054.1 KEGG: ccs:CCNA_02939 hypothetical protein YP_003592055.1 KEGG: ccs:CCNA_02940 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003592056.1 KEGG: ccs:CCNA_02941 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein YP_003592057.1 KEGG: ccs:CCNA_02942 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1022 YP_003592058.1 KEGG: NDOR1; NADPH dependent diflavin oxidoreductase 1 YP_003592059.1 KEGG: rca:Rcas_4178 hypothetical protein YP_003592060.1 KEGG: cak:Caul_4289 hypothetical protein YP_003592061.1 KEGG: ccs:CCNA_03004 cytosolic protein YP_003592062.1 PFAM: HWE histidine kinase; histidine kinase HAMP region domain protein; KEGG: ccs:CCNA_03003 two component sensor histidine kinase YP_003592063.1 KEGG: ccs:CCNA_03002 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003592064.1 KEGG: cak:Caul_4282 hypothetical protein YP_003592065.1 KEGG: ccs:CCNA_02997 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003592066.1 KEGG: atm; ataxia telangiectasia mutated; K04728 ataxia telangectasia mutated family protein YP_003592067.1 PFAM: Patatin; KEGG: ccs:CCNA_02996 patatin family phospholipase domain protein YP_003592068.1 PFAM: LytTr DNA-binding region; KEGG: swi:Swit_3222 response regulator receiver protein YP_003592069.1 PFAM: Protein of unknown function DUF2306, membrane; KEGG: pzu:PHZ_c0944 hypothetical protein YP_003592070.1 KEGG: ccs:CCNA_02994 carbamoyl-phosphate synthase large chain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_003592071.1 KEGG: ccs:CCNA_02989 hypothetical protein YP_003592072.1 KEGG: cti:RALTA_B1936 hypothetical protein YP_003592073.1 PFAM: GtrA family protein; KEGG: ccs:CCNA_02984 monosaccharide translocase (flippase type) YP_003592074.1 PFAM: glycosyl transferase family 2; KEGG: ccs:CCNA_02983 polyprenyl-phosphate beta-D-glucosyltransferase YP_003592075.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: eli:ELI_05015 hypothetical protein YP_003592076.1 PFAM: Carboxylesterase type B; KEGG: cak:Caul_3283 esterase/lipase-like protein YP_003592077.1 KEGG: cak:Caul_3285 hypothetical protein YP_003592078.1 KEGG: cak:Caul_3286 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003592079.1 KEGG: cak:Caul_3287 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003592080.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: ccs:CCNA_02975 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_003592081.1 PFAM: plasmid stabilization system; KEGG: cak:Caul_4276 plasmid stabilization system protein YP_003592082.1 KEGG: ccs:CCNA_02972 hypothetical protein YP_003592083.1 KEGG: rsp:RSP_2037 hypothetical protein YP_003592084.1 KEGG: ccs:CCNA_02934 hypothetical protein YP_003592085.1 PFAM: peptidase M28; KEGG: ccs:CCNA_02933 aminopeptidase YP_003592086.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein YP_003592087.1 KEGG: eta:ETA_06510 hypothetical protein YP_003592088.1 KEGG: ccs:CCNA_02925 carbamoyl-phosphate synthase small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain YP_003592089.1 PFAM: protein of unknown function DUF1272; KEGG: ccs:CCNA_02924 cytosolic protein YP_003592090.1 KEGG: ccs:CCNA_02923 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003592091.1 KEGG: ccs:CCNA_02922 hypothetical protein YP_003592092.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ccs:CCNA_02908 hydrolase (HAD superfamily) YP_003592093.1 PFAM: acyltransferase 3; KEGG: ccs:CCNA_02906 acyltransferase family protein YP_003592094.1 PFAM: protein of unknown function DUF559; KEGG: cak:Caul_3958 hypothetical protein YP_003592095.1 KEGG: ccs:CCNA_02904 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003592096.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ccs:CCNA_02903 starvation sensing protein RspA YP_003592097.1 KEGG: ccs:CCNA_02902 xylan alpha-1,2-glucuronosidase; PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase family 67; glycosyl hydrolase 67 C-teriminal domain protein YP_003592098.1 TIGRFAM: amidohydrolase; KEGG: ccs:CCNA_02900 N-acyl-L-amino acid amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003592099.1 PFAM: glycosyl hydrolase family 10; KEGG: ccs:CCNA_02894 endo-1,4-beta-xylanase; SMART: glycosyl hydrolase family 10 YP_003592100.1 KEGG: ccs:CCNA_02893 beta-xylosidase/alpha-L-arabinofuranosidase; PFAM: glycosyl hydrolase family 43 YP_003592101.1 PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: ccs:CCNA_02889 peptidyl-prolyl cis-trans isomerase YP_003592102.1 KEGG: cak:Caul_2539 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003592103.1 PFAM: amine oxidase; KEGG: ccs:CCNA_02883 amine oxidase (flavin-containing) YP_003592104.1 PFAM: cytochrome C class I; KEGG: ccs:CCNA_02882 cytochrome C6 YP_003592105.1 PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_02881 oxoglutarate semialdehyde dehydrogenase YP_003592106.1 PFAM: protein of unknown function DUF264; KEGG: ccs:CCNA_02880 phage DNA packaging protein YP_003592107.1 PFAM: protein of unknown function DUF559; KEGG: ccs:CCNA_02876 cytosolic protein YP_003592108.1 KEGG: ccs:CCNA_02877 portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_003592109.1 KEGG: ccs:CCNA_02875 hypothetical protein YP_003592110.1 KEGG: ccs:CCNA_02874 phage prohead protease; TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97 YP_003592111.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_02873 glyoxalase/bleomycin resistance protein, dioxygenase superfamily YP_003592112.1 KEGG: ccs:CCNA_02872 phage prohead protease; TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97 YP_003592113.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: cak:Caul_3912 uncharacterized phage protein YP_003592114.1 KEGG: ccs:CCNA_02871 gene transfer agent (GTA)-related protein YP_003592115.1 KEGG: ccs:CCNA_02870 phage protein; TIGRFAM: phage major tail protein, TP901-1 family; PFAM: Phage major tail protein, TP901-1, subfamily 1 YP_003592116.1 KEGG: ccs:CCNA_02869 gene transfer agent (GTA) protein YP_003592117.1 PFAM: Protein of unknown function DUF2376, phage; KEGG: ccs:CCNA_02868 hypothetical protein YP_003592118.1 KEGG: ccs:CCNA_02867 phage tail length tape measure-related protein YP_003592119.1 KEGG: hne:HNE_2227 hypothetical protein YP_003592120.1 PFAM: protein of unknown function DUF805; KEGG: ccs:CCNA_02866 hypothetical protein YP_003592121.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_02865 phage protein YP_003592122.1 PFAM: Phage conserved hypothetical protein, gene transfer agent-like-like; KEGG: ccs:CCNA_02864 phage protein YP_003592123.1 KEGG: ccs:CCNA_02863 Spr-family cell wall-associated hydrolase; TIGRFAM: phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein YP_003592124.1 KEGG: cak:Caul_3901 gene transfer agent (GTA) orfg15, like protein YP_003592125.1 KEGG: ccs:CCNA_02860 chaperone protein DnaJ; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003592126.1 PFAM: TonB-dependent receptor plug; KEGG: ccs:CCNA_02106 TonB-dependent outer membrane receptor YP_003592127.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: ccs:CCNA_02855 hypothetical protein YP_003592128.1 KEGG: ccs:CCNA_02854 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003592129.1 KEGG: ccs:CCNA_02853 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein YP_003592130.1 KEGG: ccs:CCNA_02852 hypothetical protein YP_003592131.1 TIGRFAM: cytochrome C-type biogenesis protein CcmI; KEGG: ccs:CCNA_02850 cytochrome C-type biogenesis protein CcmI YP_003592132.1 PFAM: CcmE/CycJ protein; KEGG: ccs:CCNA_02849 cytochrome C-type biogenesis heme chaperone YP_003592133.1 KEGG: ccs:CCNA_02848 heme chaperone-apocytochrome heme-lyase; TIGRFAM: cytochrome C-type biogenesis protein CcmF; PFAM: cytochrome C assembly protein YP_003592134.1 PFAM: cytochrome C biogenesis protein; KEGG: ccs:CCNA_02847 cytochrome C-type biogenesis protein CcmH YP_003592135.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: ccs:CCNA_02846 endopeptidase DegP; SMART: PDZ/DHR/GLGF domain protein YP_003592136.1 KEGG: ccs:CCNA_02845 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003592137.1 KEGG: ccs:CCNA_02842 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_003592138.1 PFAM: peptidase M56 BlaR1; KEGG: ccs:CCNA_02840 transcriptional regulator YP_003592139.1 PFAM: FAD dependent oxidoreductase; KEGG: cak:Caul_4744 FAD dependent oxidoreductase YP_003592140.1 KEGG: ccs:CCNA_02839 glutamate-ammonia-ligase adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_003592141.1 KEGG: ccs:CCNA_02838 EF hand domain protein; PFAM: EF-Hand domain; SMART: Calcium-binding EF-hand-containing protein YP_003592142.1 KEGG: ccs:CCNA_02837 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003592143.1 KEGG: ccs:CCNA_02836 hypothetical protein YP_003592144.1 KEGG: ccs:CCNA_02835 hypothetical protein YP_003592145.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ccs:CCNA_02834 molybdopterin dependent oxidoreductase YP_003592146.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: ccs:CCNA_02833 hypothetical protein YP_003592147.1 PFAM: peptidase M19 renal dipeptidase; KEGG: ccs:CCNA_02832 microsomal dipeptidase YP_003592148.1 KEGG: pzu:PHZ_c1065 DNA repair protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_003592149.1 KEGG: ccs:CCNA_02759 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003592150.1 KEGG: ccs:CCNA_02758 hypothetical protein YP_003592151.1 KEGG: ccs:CCNA_02757 sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_003592152.1 PFAM: molybdopterin binding domain; KEGG: ccs:CCNA_02756 competence-damage protein YP_003592153.1 KEGG: ccs:CCNA_02755 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003592154.1 KEGG: sca:Sca_2467 hypothetical protein YP_003592155.1 PFAM: amidohydrolase; KEGG: ccs:CCNA_02754 parathion hydrolase YP_003592156.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: ccs:CCNA_02753 aminoacyl peptidase YP_003592157.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: ccs:CCNA_02752 GAF/PAS-family histidine kinase/receiver protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; response regulator receiver YP_003592158.1 KEGG: ccs:CCNA_02751 ABC transporter ATP-binding protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_003592159.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ccs:CCNA_02750 ABC transporter permease protein YP_003592160.1 KEGG: ccs:CCNA_02749 hypothetical protein YP_003592161.1 KEGG: ccs:CCNA_02748 hypothetical protein YP_003592162.1 PFAM: NLPA lipoprotein; KEGG: ccs:CCNA_02747 ABC transporter substrate-binding protein YP_003592163.1 KEGG: ccs:CCNA_02744 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003592164.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_02743 TonB dependent receptor YP_003592165.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_02742 oxalate/formate antiporter YP_003592166.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_02741 hypothetical protein YP_003592167.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_02738 granaticin polyketide synthase ketoacyl reductase 2 YP_003592168.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: ccs:CCNA_02737 queuosine biosynthesis protein QueF; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_003592169.1 KEGG: bid:Bind_0067 hypothetical protein YP_003592170.1 PFAM: nitroreductase; KEGG: ccs:CCNA_02736 nitroreductase family YP_003592171.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_02735 phosphohydrolase (MutT/NUDIX family protein) YP_003592172.1 PFAM: purine or other phosphorylase family 1; KEGG: dat:HRM2_28110 purine nucleoside phosphorylase YP_003592173.1 TIGRFAM: serine O-acetyltransferase; KEGG: ccs:CCNA_02734 serine acetyltransferase; PFAM: serine acetyltransferase domain protein; transferase hexapeptide repeat containing protein YP_003592174.1 PFAM: glutamine cyclotransferase; KEGG: ccs:CCNA_02733 glutaminyl-peptide cyclotransferase YP_003592175.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_3735 LysR family transcriptional regulator YP_003592176.1 KEGG: ccs:CCNA_02732 hypothetical protein YP_003592177.1 PFAM: major facilitator superfamily MFS_1; KEGG: mno:Mnod_0305 major facilitator superfamily MFS_1 YP_003592178.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_02731 acetyltransferase YP_003592179.1 KEGG: ccs:CCNA_02729 oligopeptide transporter; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein YP_003592180.1 KEGG: ccs:CCNA_02728 hypothetical protein YP_003592181.1 PFAM: PhoH family protein; KEGG: ccs:CCNA_02727 PhoH protein YP_003592182.1 KEGG: ccs:CCNA_02726 acetyltransferase/acyltransferase YP_003592183.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: ccs:CCNA_02725 choline dehydrogenase YP_003592184.1 PFAM: protein of unknown function DUF1457; KEGG: ccs:CCNA_02723 hypothetical protein YP_003592185.1 PFAM: peptidase M16 domain protein; KEGG: ccs:CCNA_02721 peptidase, M16 family YP_003592186.1 PFAM: Protein of unknown function DUF2336; KEGG: ccs:CCNA_02720 hypothetical protein YP_003592187.1 KEGG: ccs:CCNA_02717 maltose/maltodextrin transport ATP-binding protein MalK; PFAM: ABC transporter related; SMART: AAA ATPase YP_003592188.1 PFAM: NMT1/THI5 like domain protein; KEGG: ccs:CCNA_02716 ABC transporter substrate-binding protein YP_003592189.1 KEGG: ccs:CCNA_02715 MASE1-family sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; MASE1 domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003592190.1 KEGG: ccs:CCNA_02714 ABC transporter ATP-binding protein uup; PFAM: ABC transporter related; SMART: AAA ATPase YP_003592191.1 PFAM: Rhomboid family protein; KEGG: ccs:CCNA_02710 integral membrane protein (rhomboid family) YP_003592192.1 KEGG: ccr:CC_2626 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_003592193.1 KEGG: ccs:CCNA_02708 Rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003592194.1 KEGG: cak:Caul_3723 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003592195.1 KEGG: ccs:CCNA_02704 NADP-dependent malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase YP_003592196.1 KEGG: ccs:CCNA_02703 urate oxidase; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin YP_003592197.1 KEGG: ccs:CCNA_02702 xanthine dehydrogenase small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; ferredoxin; CO dehydrogenase flavoprotein domain protein YP_003592198.1 TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: ccs:CCNA_02701 xanthine dehydrogenase large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_003592199.1 KEGG: ccs:CCNA_02700 XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase); TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182 YP_003592200.1 KEGG: ccs:CCNA_02699 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase YP_003592201.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ccs:CCNA_02698 inosine-uridine preferring nucleoside hydrolase YP_003592202.1 KEGG: ccs:CCNA_02697 hypothetical protein YP_003592203.1 TIGRFAM: amidohydrolase, AtzE family; KEGG: ccs:CCNA_02696 glutamyl-tRNA(Gln) amidotransferase subunit A; PFAM: Amidase YP_003592204.1 KEGG: ccs:CCNA_02695 hypothetical protein YP_003592205.1 PFAM: Acetamidase/Formamidase; KEGG: ccs:CCNA_02694 acetamidase YP_003592206.1 PFAM: YceI family protein; KEGG: ccs:CCNA_02692 hypothetical protein YP_003592207.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_02691 transcriptional regulator, TetR family YP_003592208.1 PFAM: protein of unknown function DUF989; KEGG: ccs:CCNA_02690 hypothetical protein YP_003592209.1 KEGG: ccs:CCNA_02689 urate oxidase; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_003592210.1 TIGRFAM: urate catabolism protein; KEGG: ccs:CCNA_02688 chitooligosaccharide deacetylase; PFAM: polysaccharide deacetylase YP_003592211.1 KEGG: sgr:SGR_6792 hypothetical protein YP_003592212.1 PFAM: aminotransferase class V; KEGG: ccs:CCNA_02687 serine-pyruvate aminotransferase YP_003592213.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: ccs:CCNA_02686 N-carbamoyl-L-amino acid hydrolase; PFAM: peptidase M20 YP_003592214.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cak:Caul_3703 MscS mechanosensitive ion channel YP_003592215.1 PFAM: Protein of unknown function DUF2177, membrane; KEGG: ccs:CCNA_02685 hypothetical protein YP_003592216.1 PFAM: Methyltransferase type 11; KEGG: ccs:CCNA_02684 cyclopropane fatty acid synthase-like methyltransferase YP_003592217.1 TIGRFAM: gid protein; KEGG: ccs:CCNA_02681 glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003592218.1 KEGG: ccs:CCNA_02680 hypothetical protein YP_003592219.1 manually curated; KEGG: ccs:CCNA_02679 hypothetical protein YP_003592220.1 KEGG: ccs:CCNA_02678 hypothetical protein YP_003592221.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_02677 glutathione S-transferase YP_003592222.1 KEGG: ccs:CCNA_02676 hypothetical protein YP_003592223.1 KEGG: ccs:CCNA_02673 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_003592224.1 KEGG: nml:Namu_1054 transcriptional regulator, Fis family YP_003592225.1 KEGG: ccs:CCNA_02671 hypothetical protein YP_003592226.1 KEGG: ccs:CCNA_02671 hypothetical protein YP_003592227.1 KEGG: ccs:CCNA_02670 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003592228.1 KEGG: ccs:CCNA_02669 hypothetical protein YP_003592229.1 PFAM: ribosomal L11 methyltransferase; KEGG: ccs:CCNA_02668 ribosomal protein L11 methyltransferase YP_003592230.1 KEGG: ccs:CCNA_02667 flagellar basal-body protein FlbY YP_003592231.1 PFAM: Flagellar protein FlgJ-like; KEGG: ccs:CCNA_02666 chemotactic signal-response protein CheL YP_003592232.1 PFAM: flagellar P-ring protein; KEGG: ccs:CCNA_02665 flagellar P-ring protein FlgI YP_003592233.1 PFAM: Flagellar assembly regulator FliX, class II; KEGG: ccs:CCNA_02664 flagellar assembly regulator FliX YP_003592234.1 KEGG: ccs:CCNA_02663 DnaK suppressor protein DksA; TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type YP_003592235.1 PFAM: esterase; KEGG: bce:BC3734 IroE protein YP_003592236.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ccs:CCNA_02660 pyridoxamine 5'-phosphate oxidase family protein YP_003592237.1 KEGG: ccs:CCNA_02659 two-component receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003592238.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_02658 3-hydroxybutyryl-CoA dehydratase YP_003592239.1 KEGG: ccs:CCNA_02657 hypothetical protein YP_003592240.1 KEGG: hypothetical protein YP_003592241.1 PFAM: Protein of unknown function DUF2236; KEGG: ccs:CCNA_02653 sensory transduction protein kinase YP_003592242.1 PFAM: FAD dependent oxidoreductase; KEGG: ccs:CCNA_02652 cyclohexanone monooxygenase YP_003592243.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccs:CCNA_02651 transporter, drug/metabolite exporter family YP_003592244.1 KEGG: ccs:CCNA_02650 anhydro-N-acetylmuramyl-tripeptide amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003592245.1 PFAM: Negative transcriptional regulator; KEGG: ccs:CCNA_02649 transcriptional regulator YP_003592246.1 PFAM: MraZ domain; KEGG: cak:Caul_3676 hypothetical protein YP_003592247.1 KEGG: ccs:CCNA_02645 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_003592248.1 KEGG: ccs:CCNA_02644 cell division protein YP_003592249.1 KEGG: ccs:CCNA_02642 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003592250.1 KEGG: ccs:CCNA_02641 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003592251.1 TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; KEGG: ccs:CCNA_02640 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_003592252.1 KEGG: ccs:CCNA_02639 UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003592253.1 PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: ccs:CCNA_02638 chloride channel protein YP_003592254.1 KEGG: tcu:Tcur_4403 RarD protein, DMT superfamily transporter YP_003592255.1 KEGG: ccs:CCNA_02637 PAS-family sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-4 domain protein YP_003592256.1 KEGG: dat:HRM2_28950 hypothetical protein YP_003592257.1 KEGG: pzu:PHZ_c3040 hypothetical protein YP_003592258.1 KEGG: cak:Caul_1061 hypothetical protein YP_003592259.1 KEGG: ccs:CCNA_02635 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_003592260.1 TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: ccs:CCNA_02634 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28 YP_003592261.1 KEGG: cak:Caul_0275 hypothetical protein YP_003592262.1 KEGG: ccs:CCNA_02630 hypothetical protein YP_003592263.1 KEGG: ccs:CCNA_02629 UDP-N-acetylmuramate--alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003592264.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: ccs:CCNA_02628 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_003592265.1 PFAM: peptidase M28; KEGG: cak:Caul_3661 peptidase M28 YP_003592266.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: ccs:CCNA_02626 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_003592267.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: ccs:CCNA_02625 cell division protein FtsQ YP_003592268.1 KEGG: ccs:CCNA_02624 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_003592269.1 KEGG: ccs:CCNA_02623 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_003592270.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mei:Msip34_0889 cobalamin synthesis protein P47K YP_003592271.1 KEGG: nmu:Nmul_A0586 hypothetical protein YP_003592272.1 KEGG: ccs:CCNA_02621 CAAX amino terminal protease family; manually curated; PFAM: Abortive infection protein YP_003592273.1 PFAM: band 7 protein; KEGG: ccs:CCNA_02619 stomatin/prohibitin-related protein YP_003592274.1 KEGG: ccs:CCNA_02617 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003592275.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: ccs:CCNA_02616 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003592276.1 TIGRFAM: homogentisate 1,2-dioxygenase; KEGG: ccs:CCNA_02615 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase YP_003592277.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ccs:CCNA_02614 fumarylacetoacetase YP_003592278.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ccs:CCNA_02613 Rieske (2Fe-2S) domain protein YP_003592279.1 KEGG: aba:Acid345_0797 hypothetical protein YP_003592280.1 PFAM: Endoribonuclease L-PSP; KEGG: ccs:CCNA_01143 translation initiation inhibitor YP_003592281.1 PFAM: cytochrome C class I; KEGG: ccs:CCNA_01144 cytochrome C oxidase polypeptide II YP_003592282.1 PFAM: amine oxidase; KEGG: ccs:CCNA_01145 amine oxidase (flavin-containing) YP_003592283.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_01147 acetyltransferase YP_003592284.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01149 TonB-dependent outer membrane receptor YP_003592285.1 KEGG: cak:Caul_3645 hypothetical protein YP_003592286.1 KEGG: ccs:CCNA_01151 transcriptional regulator, DeoR family YP_003592287.1 PFAM: protein of unknown function DUF519; KEGG: ccs:CCNA_01152 external DNA uptake/catabolism protein YP_003592288.1 KEGG: ccs:CCNA_01153 chromate transport protein; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter YP_003592289.1 KEGG: ccs:CCNA_01154 hypothetical protein YP_003592290.1 KEGG: ccs:CCNA_01137 ribosomal-protein-alanine acetyltransferase YP_003592291.1 KEGG: ccs:CCNA_01138 hypothetical protein YP_003592292.1 PFAM: protein of unknown function DUF885; KEGG: ccs:CCNA_01139 conserved cytosolic protein YP_003592293.1 KEGG: ccs:CCNA_01140 sensory box/GGDEF family protein; PFAM: EAL domain protein; PAS fold-3 domain protein; SMART: EAL domain protein; PAS domain containing protein YP_003592294.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: ccs:CCNA_01141 RecA protein; SMART: AAA ATPase YP_003592295.1 PFAM: protein of unknown function DUF1311; KEGG: apt:APA01_05000 hypothetical protein YP_003592296.1 TIGRFAM: alanyl-tRNA synthetase; KEGG: ccs:CCNA_02612 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_003592297.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_02610 glyoxalase family protein YP_003592298.1 KEGG: cak:Caul_1000 hypothetical protein YP_003592299.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bja:blr4505 hypothetical protein YP_003592300.1 KEGG: pzu:PHZ_c2766 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003592301.1 PFAM: Auxin Efflux Carrier; KEGG: ccs:CCNA_02609 malonate transporter YP_003592302.1 KEGG: ccs:CCNA_02608 hypothetical protein YP_003592303.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: ccs:CCNA_02607 isocitrate dehydrogenase (NADP); PFAM: isocitrate/isopropylmalate dehydrogenase YP_003592304.1 KEGG: ccs:CCNA_02606 hybrid sensor histidine kinase/receiver domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003592305.1 KEGG: cak:Caul_3523 beta-lactamase YP_003592306.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ccs:CCNA_02605 rRNA methylase, SpoU family YP_003592307.1 PFAM: Host attachment protein; KEGG: ccs:CCNA_02604 host cell attachment protein YP_003592308.1 PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: ccs:CCNA_02603 phosphatidylserine decarboxylase YP_003592309.1 KEGG: ccs:CCNA_02601 glutathione-dependent formaldehyde dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_003592310.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: ccs:CCNA_02600 S-formylglutathione hydrolase; PFAM: esterase YP_003592311.1 KEGG: ccs:CCNA_02597 hypothetical protein YP_003592312.1 KEGG: dda:Dd703_3724 HupC/HyaC/HydC family protein YP_003592313.1 TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; KEGG: ccs:CCNA_02596 SSU ribosomal protein S4P; SMART: RNA-binding S4 domain protein YP_003592314.1 KEGG: ccs:CCNA_02595 hypothetical protein YP_003592315.1 PFAM: peptidase M48 Ste24p; KEGG: ccs:CCNA_02594 endopeptidase HtpX YP_003592316.1 PFAM: beta-lactamase; KEGG: cak:Caul_3510 beta-lactamase YP_003592317.1 KEGG: ccs:CCNA_02593 hypothetical protein YP_003592318.1 PFAM: acyl-ACP thioesterase; KEGG: ccs:CCNA_02592 thioesterase YP_003592319.1 KEGG: ccs:CCNA_02591 glutaredoxin; TIGRFAM: glutaredoxin; PFAM: glutaredoxin YP_003592320.1 KEGG: ccs:CCNA_02590 hypothetical protein YP_003592321.1 PFAM: BolA family protein; KEGG: ccr:CC_2503 BolA/YrbA family protein YP_003592322.1 PFAM: peptidase M28; KEGG: ccs:CCNA_02588 aminopeptidase YP_003592323.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; KEGG: ccs:CCNA_02587 PAS-family sensor histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003592324.1 KEGG: oan:Oant_4311 signal transduction histidine kinase; manually curated; PFAM: HWE histidine kinase; PAS fold-4 domain protein YP_003592325.1 KEGG: cak:Caul_3456 secreted protein YP_003592326.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: ccs:CCNA_02586 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003592327.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpb:RPB_0459 endonuclease/exonuclease/phosphatase family protein YP_003592328.1 KEGG: GI10860 gene product from transcript GI10860-RA YP_003592329.1 KEGG: cak:Caul_3451 peptidase S15; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein YP_003592330.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: ccs:CCNA_02583 phosphoribosylformylglycinamidine synthase I; PFAM: ThiJ/PfpI domain protein YP_003592331.1 KEGG: ccs:CCNA_02581 hypothetical protein YP_003592332.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: ccs:CCNA_02580 rubredoxin YP_003592333.1 PFAM: cytochrome P450; KEGG: ccs:CCNA_02579 cytochrome P450 YP_003592334.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_02578 transcriptional regulator, TetR family YP_003592335.1 KEGG: ccs:CCNA_02577 phosphoribosylformylglycinamidine synthase, PurS component; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS YP_003592336.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: ccs:CCNA_02576 phosphoribosylamidoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003592337.1 PFAM: protein of unknown function DUF1476; KEGG: ccs:CCNA_02575 cytosolic protein YP_003592338.1 PFAM: Domain of unknown function DUF1842; KEGG: fjo:Fjoh_0435 hypothetical protein YP_003592339.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: cak:Caul_3440 uracil-DNA glycosylase superfamily protein YP_003592340.1 SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: ccs:CCNA_02573 proline hydroxylase YP_003592341.1 KEGG: ccs:CCNA_02572 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like YP_003592342.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_02570 transporter YP_003592343.1 PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_3437 glutathione S-transferase YP_003592344.1 KEGG: bma:BMA1675 lipoprotein YP_003592345.1 KEGG: pzu:PHZ_c0474 outer membrane lipoprotein SlyB precursor YP_003592346.1 KEGG: pzu:PHZ_c1091 transcriptional regulator; manually curated; PFAM: transcriptional regulator domain protein YP_003592347.1 KEGG: rpe:RPE_3044 hypothetical protein YP_003592348.1 PFAM: amine oxidase; KEGG: ccs:CCNA_01157 protoporphyrinogen oxidase YP_003592349.1 KEGG: stp:Strop_4306 hypothetical protein YP_003592350.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01159 transporter, major facilitator superfamily YP_003592351.1 PFAM: sodium:dicarboxylate symporter; KEGG: ccs:CCNA_01161 proton/sodium-glutamate symport protein YP_003592352.1 PFAM: glycosyl hydrolase family 3 domain protein; KEGG: ccs:CCNA_01162 beta-glucosidase YP_003592353.1 KEGG: ccs:CCNA_01163 ice nucleation protein YP_003592354.1 KEGG: ccs:CCNA_01164 O-linked GlcNAc transferase; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat YP_003592355.1 KEGG: ter:Tery_2708 tetratricopeptide TPR_2 YP_003592356.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_01167 acyl-CoA dehydrogenase YP_003592357.1 KEGG: bur:Bcep18194_B0429 hypothetical protein YP_003592358.1 manually curated; KEGG: ccs:CCNA_01171 histidine phosphotransferase ShpA YP_003592359.1 PFAM: protein of unknown function DUF124; KEGG: ccs:CCNA_01172 hypothetical protein YP_003592360.1 PFAM: Chorismate mutase, type II; KEGG: ccs:CCNA_01173 chorismate mutase YP_003592361.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ccs:CCNA_01174 transcriptional regulator, LysR family YP_003592362.1 KEGG: ccs:CCNA_01175 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003592363.1 manually curated; KEGG: ccs:CCNA_01176 hypothetical protein YP_003592364.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: ccs:CCNA_01177 sulfite reductase (ferredoxin) YP_003592365.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_01178 oxidoreductase YP_003592366.1 KEGG: ccs:CCNA_01179 phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_003592367.1 PFAM: beta-lactamase; KEGG: cpi:Cpin_2793 beta-lactamase YP_003592368.1 PFAM: transcriptional regulator PadR family protein; KEGG: fra:Francci3_3907 PadR family transcriptional regulator YP_003592369.1 PFAM: 3D domain protein; KEGG: ccs:CCNA_01181 hypothetical protein YP_003592370.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_01182 glutathione S-transferase YP_003592371.1 KEGG: ccs:CCNA_01183 hypothetical protein YP_003592372.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_01184 phosphohydrolase (MutT/NUDIX family protein) YP_003592373.1 KEGG: ccs:CCNA_01185 hypothetical protein YP_003592374.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: ccs:CCNA_02567 sensory transduction histidine kinase PleC; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003592375.1 KEGG: ccs:CCNA_02566 membrane alanine aminopeptidase; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase YP_003592376.1 KEGG: ccr:CC_2480 hypothetical protein YP_003592377.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_02564 acyl-CoA dehydrogenase, short-chain specific YP_003592378.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_02563 acyl-CoA dehydrogenase YP_003592379.1 KEGG: cak:Caul_3424 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_003592380.1 PFAM: Amidase; KEGG: ccs:CCNA_02558 enantioselective peptide amidase YP_003592381.1 KEGG: ccs:CCNA_02557 acyl-CoA thioesterase II YP_003592382.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: eli:ELI_01715 dipeptidyl aminopeptidase YP_003592383.1 KEGG: ccs:CCNA_02238 hypothetical protein YP_003592384.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ccs:CCNA_02237 Xaa-Pro dipeptidyl-peptidase YP_003592385.1 PFAM: polysaccharide deacetylase; KEGG: ccs:CCNA_02236 polysaccharide deacetylase family YP_003592386.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ccs:CCNA_02235 secreted protein YP_003592387.1 KEGG: ccs:CCNA_02234 hypothetical protein YP_003592388.1 TIGRFAM: signal peptidase I; KEGG: ccs:CCNA_02233 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_003592389.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_02232 TonB-dependent receptor YP_003592390.1 KEGG: ccs:CCNA_02231 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003592391.1 PFAM: Hemolysin-type calcium-binding region; KEGG: pol:Bpro_4929 hemolysin-type calcium-binding region YP_003592392.1 KEGG: esi:Exig_1812 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003592393.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ccs:CCNA_02230 gluconate 2-dehydrogenase YP_003592394.1 KEGG: cak:Caul_4271 hypothetical protein YP_003592395.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_02226 glyoxalase family protein YP_003592396.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: ccs:CCNA_02224 methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_003592397.1 KEGG: ccs:CCNA_02223 beta-lactamase, type II YP_003592398.1 PFAM: homocysteine S-methyltransferase; KEGG: ccs:CCNA_02222 5-methyltetrahydrofolate--homocysteine methyltransferase homocysteine-binding subunit YP_003592399.1 TIGRFAM: methionine synthase; KEGG: ccs:CCNA_02221 methionine synthase I MetH; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_003592400.1 TIGRFAM: beta-galactosidase; KEGG: ccs:CCNA_02220 beta-glucosidase; PFAM: glycosyl hydrolase family 1 YP_003592401.1 KEGG: ccs:CCNA_02219 hypothetical protein YP_003592402.1 KEGG: ccs:CCNA_02218 DnaJ-like protein DjlA; PFAM: protein of unknown function DUF1332; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003592403.1 KEGG: ccs:CCNA_02217 hypothetical protein YP_003592404.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ccs:CCNA_02216 ABM family monooxygenase YP_003592405.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_02215 acyl-CoA dehydrogenase YP_003592406.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cak:Caul_3391 NADH:flavin oxidoreductase/NADH oxidase YP_003592407.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ccs:CCNA_02212 antibiotic induced protein, Drp35 YP_003592408.1 KEGG: cak:Caul_3743 integral membrane sensor hybrid histidine kinase YP_003592409.1 KEGG: ccs:CCNA_02210 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_003592410.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ccs:CCNA_02209 quinone oxidoreductase YP_003592411.1 KEGG: ccs:CCNA_02207 hypothetical protein YP_003592412.1 PFAM: protein of unknown function DUF924; KEGG: ccs:CCNA_02206 hypothetical protein YP_003592413.1 KEGG: ccs:CCNA_02205 hypothetical protein YP_003592414.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: ccs:CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003592415.1 SMART: regulatory protein ArsR; KEGG: scl:sce8846 ArsR family transcriptional regulator YP_003592416.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: cak:Caul_4251 activator of HSP90 ATPase 1 family protein YP_003592417.1 PFAM: YceI family protein; KEGG: ccs:CCNA_02203 hypothetical protein YP_003592418.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: ccs:CCNA_02201 hypothetical protein YP_003592419.1 PFAM: RNA methylase; KEGG: ccs:CCNA_02199 methyltransferase YP_003592420.1 KEGG: ccr:CC_2113 polyprenyl synthetase family protein; PFAM: Polyprenyl synthetase YP_003592421.1 PFAM: protein of unknown function DUF307; KEGG: ccs:CCNA_02196 hypothetical protein YP_003592422.1 KEGG: ccs:CCNA_02194 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_003592423.1 PFAM: protein of unknown function DUF1697; KEGG: cak:Caul_3366 hypothetical protein YP_003592424.1 PFAM: endodeoxyribonuclease RusA; KEGG: ccs:CCNA_02192 hypothetical protein YP_003592425.1 PFAM: beta-lactamase; KEGG: ccs:CCNA_02190 penicillin-binding protein YP_003592426.1 PFAM: Peptidase C13, legumain asparaginyl peptidase; KEGG: ccs:CCNA_02189 peptidase, C13 family YP_003592427.1 PFAM: thioesterase superfamily protein; KEGG: ccs:CCNA_02188 cytosolic protein YP_003592428.1 PFAM: protein of unknown function DUF1321; KEGG: ccs:CCNA_02187 hypothetical protein YP_003592429.1 KEGG: cak:Caul_3358 hypothetical protein YP_003592430.1 KEGG: mva:Mvan_3018 hypothetical protein YP_003592431.1 KEGG: cak:Caul_3357 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003592432.1 KEGG: cak:Caul_3355 hypothetical protein YP_003592433.1 KEGG: cak:Caul_3354 hypothetical protein YP_003592434.1 KEGG: ccs:CCNA_02186 acetolactate synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003592435.1 KEGG: ccs:CCNA_02185 acetolactate synthase large subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_003592436.1 PFAM: beta-lactamase; KEGG: mmr:Mmar10_1527 beta-lactamase YP_003592437.1 PFAM: CinA domain protein; KEGG: cak:Caul_3350 CinA domain-containing protein YP_003592438.1 KEGG: similar to nestin; K07609 nestin YP_003592439.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: ccs:CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003592440.1 KEGG: cak:Caul_3348 hypothetical protein YP_003592441.1 TIGRFAM: phosphoserine phosphatase; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: ccs:CCNA_02182 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003592442.1 KEGG: ccs:CCNA_02181 phosphatase/phosphohexomutase family protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003592444.1 PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: ccs:CCNA_02180 iron-sulfur cluster assembly/repair protein ApbC YP_003592445.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: ccs:CCNA_02179 long-chain fatty acid transport protein precursor YP_003592446.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_02178 short-chain alcohol dehydrogenase YP_003592447.1 PFAM: secretion protein hemolysin D; KEGG: ccs:CCNA_02174 multidrug resistance efflux pump YP_003592448.1 KEGG: ccs:CCNA_02173 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003592449.1 PFAM: protein of unknown function DUF214; KEGG: ccs:CCNA_02172 transporter YP_003592450.1 KEGG: pfo:Pfl01_4199 signal transduction protein YP_003592451.1 PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; KEGG: ccs:CCNA_02171 nucleoside permease NupC YP_003592452.1 KEGG: rpd:RPD_0163 hypothetical protein; manually curated; PFAM: protein of unknown function DUF559 YP_003592453.1 PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_3335 glutathione S-transferase YP_003592454.1 PFAM: thioesterase superfamily protein; KEGG: ccs:CCNA_02169 thioesterase superfamily protein YP_003592455.1 KEGG: cak:Caul_3333 hypothetical protein YP_003592456.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: ccs:CCNA_02166 uracil DNA glycosylase superfamily protein YP_003592457.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_02165 esterase/lipase YP_003592458.1 PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase; KEGG: ccs:CCNA_02164 leucine dehydrogenase YP_003592459.1 PFAM: UvrB/UvrC protein; KEGG: cak:Caul_3326 UvrB/UvrC protein YP_003592460.1 KEGG: cak:Caul_3327 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_003592461.1 KEGG: cak:Caul_3325 hypothetical protein YP_003592462.1 KEGG: cak:Caul_3324 transglutaminase domain-containing protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein YP_003592463.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_02161 transcriptional regulator, TetR family YP_003592464.1 PFAM: glycosyl transferase family 2; KEGG: ccs:CCNA_02158 rhamnosyl transferase YP_003592465.1 KEGG: ccs:CCNA_02157 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003592466.1 KEGG: ccs:CCNA_02156 hypothetical protein YP_003592467.1 KEGG: ccs:CCNA_02155 hypothetical protein YP_003592468.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_02154 GCN5-related N-acetyltransferase YP_003592469.1 KEGG: gvi:gll2260 oxidoreductase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003592470.1 PFAM: helix-turn-helix HxlR type; KEGG: mrd:Mrad2831_1564 HxlR family transcriptional regulator YP_003592471.1 PFAM: phosphoglycerate mutase; KEGG: ccs:CCNA_02152 phosphoglycerate mutase YP_003592472.1 KEGG: ccs:CCNA_02151 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_003592473.1 PFAM: Polyprenyl synthetase; KEGG: ccs:CCNA_02150 dimethylallyltransferase/geranyltranstransferase YP_003592474.1 KEGG: ccs:CCNA_02149 1-deoxy-D-xylulose 5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein YP_003592475.1 PFAM: flagellar L-ring protein; KEGG: ccs:CCNA_02145 flagellar L-ring protein FlgH YP_003592476.1 KEGG: ccs:CCNA_02144 flagella basal body P ring formation protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein YP_003592477.1 KEGG: ccs:CCNA_02143 flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003592478.1 KEGG: ccs:CCNA_02142 flagellar basal-body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003592479.1 PFAM: flagellar basal body-associated protein FliL; KEGG: ccs:CCNA_02141 flagellar FliL protein YP_003592480.1 KEGG: ccs:CCNA_02140 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_003592481.1 KEGG: ccs:CCNA_02139 polar flagellum positioning protein PflI YP_003592482.1 KEGG: ccs:CCNA_02138 hypothetical protein YP_003592483.1 PFAM: Tetratricopeptide TPR_4; KEGG: ccs:CCNA_02137 endoglucanase H YP_003592484.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: ccs:CCNA_02136 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003592485.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: ccs:CCNA_02135 6-phosphogluconolactonase YP_003592486.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: ccs:CCNA_02134 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003592487.1 TIGRFAM: glucokinase; KEGG: ccs:CCNA_02133 glucokinase; PFAM: Glucokinase YP_003592488.1 KEGG: ele:Elen_1462 YhgE/Pip C-terminal domain protein YP_003592489.1 KEGG: ccs:CCNA_02132 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003592490.1 TIGRFAM: pyruvate kinase; KEGG: ccs:CCNA_02130 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_003592491.1 KEGG: cak:Caul_1444 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003592492.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_02129 acyl-CoA dehydrogenase, short-chain specific YP_003592493.1 PFAM: DSBA oxidoreductase; KEGG: cak:Caul_1446 DsbA oxidoreductase YP_003592494.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_02128 acyl-CoA dehydrogenase YP_003592495.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: ccs:CCNA_02127 oxacillin resistance-associated protein FmtC YP_003592496.1 KEGG: ccs:CCNA_02126 hypothetical protein YP_003592497.1 KEGG: ccs:CCNA_02124 hypothetical protein YP_003592498.1 PFAM: metallophosphoesterase; KEGG: ccs:CCNA_02122 ICC-like phosphoesterase YP_003592499.1 KEGG: ccs:CCNA_02121 ATP-dependent helicase; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003592500.1 SMART: helicase c2; KEGG: ccr:CC_2038 hypothetical protein YP_003592501.1 KEGG: cak:Caul_1457 hypothetical protein YP_003592502.1 PFAM: cyclase/dehydrase; KEGG: ccs:CCNA_02117 polyketide cyclase/lipid transport protein YP_003592503.1 KEGG: cak:Caul_3181 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003592504.1 TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; KEGG: ccs:CCNA_02112 D-cysteine desulfhydrase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003592505.1 KEGG: ccs:CCNA_02111 PilF-related tetratricopeptide repeat protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat YP_003592506.1 KEGG: ccs:CCNA_02110 hypothetical protein YP_003592507.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: cak:Caul_3177 protein of unknown function zinc metallopeptidase YP_003592508.1 PFAM: Endoribonuclease L-PSP; KEGG: cak:Caul_3176 endoribonuclease L-PSP YP_003592509.1 KEGG: pfs:PFLU4169 hypothetical protein YP_003592510.1 KEGG: ccs:CCNA_02109 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_003592511.1 KEGG: cak:Caul_3174 hypothetical protein YP_003592512.1 KEGG: ccs:CCNA_02108 TolB protein precursor/tail-specific protease; PFAM: peptidase S41; SMART: peptidase S41 YP_003592513.1 KEGG: ccs:CCNA_02105 hypothetical protein YP_003592514.1 KEGG: ccs:CCNA_02104 hypothetical protein YP_003592515.1 PFAM: Protein of unknown function DUF2239; KEGG: ccs:CCNA_02103 cytosolic protein YP_003592516.1 KEGG: ccs:CCNA_02102 glycosyl hydrolase YP_003592517.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_02101 glyoxalase family protein YP_003592518.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sus:Acid_6921 short chain dehydrogenase YP_003592519.1 KEGG: ccs:CCNA_02099 Na+ driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003592520.1 KEGG: ccs:CCNA_02098 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003592521.1 PFAM: glycosyl transferase family 2; KEGG: ccs:CCNA_02097 periplasmic glucan glucosyltransferase YP_003592522.1 KEGG: ccs:CCNA_02096 hypothetical protein YP_003592523.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: ccs:CCNA_02095 NADP-dependent oxidoreductase YP_003592524.1 PFAM: oxidoreductase domain protein; KEGG: ccs:CCNA_02094 NAD-dependent oxidoreductase YP_003592525.1 KEGG: ccs:CCNA_02091 hypothetical protein YP_003592526.1 KEGG: ccs:CCNA_02090 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_003592527.1 KEGG: ccs:CCNA_02088 HesB protein family; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003592528.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ccs:CCNA_02087 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_003592529.1 PFAM: Sporulation domain protein; KEGG: ccs:CCNA_02086 sporulation domain-containing protein YP_003592530.1 KEGG: ccs:CCNA_02085 anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase; PFAM: glycosyl hydrolase family 3 domain protein YP_003592531.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: ccs:CCNA_02084 chromosome segregation and condensation protein fusion scpAB YP_003592532.1 KEGG: ccs:CCNA_02083 chromosome segregation and condensation protein B ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_003592533.1 KEGG: cak:Caul_2569 hypothetical protein YP_003592534.1 KEGG: ccs:CCNA_02082 sec-independent protein translocase protein TatA; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003592535.1 KEGG: ccs:CCNA_02081 sec-independent protein translocase protein TatB; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003592536.1 KEGG: ccs:CCNA_02080 sec-independent protein translocase protein TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_003592537.1 KEGG: cak:Caul_3116 hypothetical protein YP_003592538.1 TIGRFAM: seryl-tRNA synthetase; KEGG: ccs:CCNA_02078 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_003592539.1 TIGRFAM: stationary-phase survival protein SurE; KEGG: ccs:CCNA_02077 acid phosphatase SurE; PFAM: Survival protein SurE YP_003592540.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: ccs:CCNA_02076 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_003592541.1 KEGG: ccs:CCNA_02075 peptidoglycan-specific endopeptidase, M23 family; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_003592542.1 PFAM: protein of unknown function DUF815; KEGG: ccs:CCNA_02072 ATP-dependent protease subunit YP_003592543.1 KEGG: ccs:CCNA_02071 protein translocase subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_003592544.1 KEGG: cak:Caul_3108 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003592545.1 KEGG: cak:Caul_3107 protein-export membrane protein SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003592546.1 PFAM: protein of unknown function DUF498; KEGG: ccs:CCNA_02068 Mth938-like membrane protein YP_003592547.1 KEGG: ccs:CCNA_02067 hypothetical protein YP_003592548.1 KEGG: ccs:CCNA_02066 phytoene synthase family protein YP_003592549.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: ccs:CCNA_02065 acylamino-acid-releasing enzyme YP_003592550.1 KEGG: ccs:CCNA_02064 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_003592551.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: ccs:CCNA_02063 lipoprotein, ComL family YP_003592552.1 KEGG: ccs:CCNA_02062 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_003592553.1 SMART: NAD-dependent DNA ligase ; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: ccs:CCNA_01590 NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein YP_003592554.1 PFAM: Protein of unknown function DUF2147; KEGG: ccs:CCNA_01592 sn-glycerol-3-phosphate transport ATP-binding protein YP_003592555.1 KEGG: ccs:CCNA_01593 Xaa-Pro aminopeptidase; PFAM: peptidase M24; creatinase YP_003592556.1 KEGG: mag:amb0864 hypothetical protein YP_003592557.1 PFAM: ribosomal L11 methyltransferase; KEGG: ccs:CCNA_01594 ribosomal protein L11 methyltransferase YP_003592558.1 KEGG: ccs:CCNA_01595 hypothetical protein YP_003592559.1 PFAM: low temperature requirement A; KEGG: rpe:RPE_1617 low temperature requirement A YP_003592560.1 PFAM: UvrD/REP helicase; KEGG: ccs:CCNA_01596 DNA helicase II YP_003592561.1 KEGG: cak:Caul_1461 hypothetical protein YP_003592562.1 KEGG: vap:Vapar_0519 serine/threonine protein kinase YP_003592563.1 KEGG: cak:Caul_1463 hypothetical protein YP_003592564.1 KEGG: ccs:CCNA_01599 hypothetical protein YP_003592565.1 PFAM: Glutathione S-transferase domain; KEGG: swi:Swit_0145 glutathione S-transferase YP_003592566.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_01602 glutathione S-transferase YP_003592567.1 PFAM: aminotransferase class I and II; KEGG: ccs:CCNA_01603 aspartate aminotransferase YP_003592568.1 PFAM: NADPH-dependent FMN reductase; KEGG: ccs:CCNA_01605 NADPH-dependent FMN reductase family protein YP_003592569.1 PFAM: SNARE associated Golgi protein; KEGG: ccs:CCNA_01607 hypothetical protein YP_003592570.1 KEGG: cak:Caul_1485 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003592571.1 KEGG: cak:Caul_1486 hypothetical protein YP_003592572.1 PFAM: Methyltransferase type 11; KEGG: cak:Caul_1487 O-methyltransferase family protein YP_003592573.1 KEGG: ccs:CCNA_01611 transporter, drug/metabolite exporter family YP_003592574.1 KEGG: cak:Caul_1489 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003592575.1 KEGG: ccs:CCNA_01613 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_003592576.1 KEGG: cak:Caul_1491 hypothetical protein YP_003592577.1 TIGRFAM: penicillin-binding protein 2; KEGG: ccs:CCNA_01615 cell elongation specific D,D-transpeptidase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003592578.1 KEGG: cak:Caul_1493 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_003592579.1 TIGRFAM: proline iminopeptidase; KEGG: ccs:CCNA_01285 proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_003592580.1 KEGG: ccs:CCNA_01286 low temperature requirement protein A YP_003592581.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_01287 epoxide hydrolase YP_003592582.1 manually curated; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; KEGG: ccs:CCNA_01288 multidrug resistance transporter, Bcr family; PFAM: major facilitator superfamily MFS_1 YP_003592583.1 PFAM: protein of unknown function DUF423; KEGG: ccs:CCNA_01289 hypothetical protein YP_003592584.1 KEGG: ccs:CCNA_01290 hypothetical protein YP_003592585.1 PFAM: aminoglycoside phosphotransferase; KEGG: ccs:CCNA_01291 phosphotransferase family protein YP_003592586.1 KEGG: ccs:CCNA_01292 hypothetical protein YP_003592587.1 PFAM: Integral membrane protein TerC; KEGG: ccs:CCNA_01295 integral membrane protein YP_003592588.1 KEGG: xau:Xaut_0363 hypothetical protein YP_003592589.1 manually curated; TIGRFAM: RNA methyltransferase, TrmH family, group 3; KEGG: ccs:CCNA_01297 23S rRNA Gm2251 methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_003592590.1 KEGG: ccs:CCNA_03303 protein translation elongation factor Tu (EF-Tu); TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein YP_003592591.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c1449 TonB-dependent receptor YP_003592592.1 PFAM: zinc finger UBP-type protein; KEGG: xca:xccb100_3260 hypothetical protein YP_003592593.1 KEGG: cak:Caul_1608 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003592594.1 KEGG: ccs:CCNA_01300 formate dehydrogenase accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_003592595.1 KEGG: ccs:CCNA_01301 NAD-dependent formate dehydrogenase alpha subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_003592596.1 KEGG: ccs:CCNA_01303 hypothetical protein YP_003592597.1 KEGG: cak:Caul_1612 hypothetical protein YP_003592598.1 KEGG: cak:Caul_1613 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_003592599.1 KEGG: ccs:CCNA_01306 LSU ribosomal protein L3P; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_003592600.1 PFAM: ribosomal protein L4/L1e; KEGG: ccs:CCNA_01307 LSU ribosomal protein L1E-L4P YP_003592601.1 PFAM: Ribosomal protein L25/L23; KEGG: ccs:CCNA_01308 LSU ribosomal protein L23P YP_003592602.1 KEGG: ccs:CCNA_01309 LSU ribosomal protein L2P; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_003592603.1 KEGG: ccs:CCNA_01310 SSU ribosomal protein S19P; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_003592604.1 KEGG: ccs:CCNA_01311 LSU ribosomal protein L22P; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_003592605.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: ccs:CCNA_01312 SSU ribosomal protein S3P; SMART: KH domain protein YP_003592606.1 KEGG: ccs:CCNA_01313 LSU ribosomal protein L16P; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_003592607.1 KEGG: ccs:CCNA_01314 LSU ribosomal protein L29P; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_003592608.1 KEGG: ccs:CCNA_01315 SSU ribosomal protein S17P; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_003592609.1 KEGG: ccs:CCNA_01316 LSU ribosomal protein L14P; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_003592610.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: ccs:CCNA_01317 LSU ribosomal protein L24P; SMART: KOW domain protein YP_003592611.1 PFAM: ribosomal protein L5; KEGG: ccs:CCNA_01318 LSU ribosomal protein L5P YP_003592612.1 PFAM: ribosomal protein S14; KEGG: ccs:CCNA_01319 SSU ribosomal protein S14P YP_003592613.1 PFAM: ribosomal protein S8; KEGG: ccs:CCNA_01320 SSU ribosomal protein S8P YP_003592614.1 KEGG: ccs:CCNA_01321 LSU ribosomal protein L6P; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_003592615.1 KEGG: ccs:CCNA_01322 LSU ribosomal protein L18P; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_003592616.1 KEGG: ccs:CCNA_01323 SSU ribosomal protein S5P; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein YP_003592617.1 KEGG: ccs:CCNA_01324 LSU ribosomal protein L30P; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_003592618.1 KEGG: ccs:CCNA_01325 LSU ribosomal protein L15P; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15 YP_003592619.1 KEGG: ccs:CCNA_01326 protein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_003592620.1 KEGG: ccs:CCNA_01327 adenylate kinase/nucleoside-diphosphate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase YP_003592621.1 KEGG: ccs:CCNA_01328 SSU ribosomal protein S13P; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_003592622.1 KEGG: ccs:CCNA_01329 SSU ribosomal protein S11P; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_003592623.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: ccs:CCNA_01330 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003592624.1 KEGG: ccs:CCNA_01332 LSU ribosomal protein L17P; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_003592625.1 KEGG: cak:Caul_0206 hypothetical protein YP_003592626.1 KEGG: ccs:CCNA_01334 hypothetical protein YP_003592627.1 KEGG: ccs:CCNA_01335 transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_003592628.1 KEGG: ccs:CCNA_01336 phosphodiesterase I/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase YP_003592629.1 KEGG: bte:BTH_I0512 hypothetical protein YP_003592630.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_01338 glyoxalase family protein YP_003592631.1 KEGG: cak:Caul_1645 hypothetical protein YP_003592632.1 KEGG: ccs:CCNA_01339 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003592633.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: cak:Caul_1647 activator of HSP90 ATPase 1 family protein YP_003592634.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01340 tetracycline resistance protein YP_003592635.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: ccs:CCNA_01341 endopeptidase DegP; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_003592636.1 KEGG: ccs:CCNA_01342 ATPase, AAA family; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003592637.1 PFAM: pseudouridine synthase; KEGG: ccs:CCNA_01343 ribosomal large subunit pseudouridine synthase C YP_003592638.1 KEGG: ccs:CCNA_01344 hypothetical protein YP_003592639.1 KEGG: ccs:CCNA_02060 CrcB family protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_003592640.1 KEGG: ccs:CCNA_02059 ribosomal large subunit pseudouridine synthase C; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase YP_003592641.1 PFAM: protein of unknown function DUF1501; KEGG: ccs:CCNA_02058 hypothetical protein YP_003592642.1 PFAM: Protein of unknown function DUF1800; KEGG: ccs:CCNA_02057 hypothetical protein YP_003592643.1 PFAM: ATP12 ATPase; KEGG: ccs:CCNA_02056 chaperone, ATP12 family protein YP_003592644.1 PFAM: carboxyl transferase; KEGG: ccs:CCNA_02054 propionyl-CoA carboxylase carboxyltransferase subunit YP_003592645.1 KEGG: nar:Saro_3027 hypothetical protein YP_003592646.1 KEGG: ccr:CC_1479 hypothetical protein YP_003592647.1 TIGRFAM: methionyl-tRNA synthetase; KEGG: ccs:CCNA_01547 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M) YP_003592648.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01548 transporter YP_003592649.1 TIGRFAM: sulfate adenylyltransferase, large subunit; adenylylsulfate kinase; KEGG: ccs:CCNA_01549 sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; PFAM: adenylylsulfate kinase; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003592650.1 KEGG: ccs:CCNA_01550 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase YP_003592651.1 KEGG: ccs:CCNA_01551 hypothetical protein YP_003592652.1 manually curated; KEGG: ccs:CCNA_01552 polar localization protein TipN YP_003592653.1 PFAM: sugar transferase; KEGG: ccs:CCNA_01553 UDP-phosphate beta-N-acetyl-D-fucosaminephosphotransferase YP_003592654.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ccs:CCNA_01554 D-mannonate oxidoreductase YP_003592655.1 KEGG: ccs:CCNA_01555 altronate hydrolase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_003592656.1 KEGG: ccs:CCNA_01556 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003592657.1 KEGG: ccs:CCNA_01557 uronate isomerase; PFAM: Glucuronate isomerase YP_003592658.1 KEGG: ccs:CCNA_01558 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; PFAM: 5-keto 4-deoxyuronate isomerase YP_003592659.1 KEGG: ccs:CCNA_01559 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_003592660.1 PFAM: KDPG and KHG aldolase; KEGG: ccs:CCNA_01562 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase YP_003592661.1 PFAM: PfkB domain protein; KEGG: ccs:CCNA_01563 2-dehydro-3-deoxygluconokinase YP_003592662.1 KEGG: ccs:CCNA_01564 hypothetical protein YP_003592663.1 KEGG: nar:Saro_0304 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003592664.1 PFAM: protein of unknown function DUF1244; KEGG: ccs:CCNA_01566 hypothetical protein YP_003592665.1 TIGRFAM: proline iminopeptidase; KEGG: ccs:CCNA_01567 proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_003592666.1 KEGG: ccs:CCNA_01660 hypothetical protein YP_003592667.1 PFAM: PilT protein domain protein; KEGG: cak:Caul_3556 PilT domain-containing protein YP_003592668.1 TIGRFAM: prevent-host-death family protein; KEGG: cak:Caul_3557 prevent-host-death family protein YP_003592669.1 PFAM: sodium/hydrogen exchanger; KEGG: ccs:CCNA_01568 Na(+)/H(+) antiporter YP_003592670.1 KEGG: nml:Namu_0307 CsbD family protein YP_003592671.1 PFAM: tryptophan halogenase; KEGG: cak:Caul_3561 tryptophan halogenase YP_003592672.1 KEGG: pzu:PHZ_c2460 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003592673.1 PFAM: glucose sorbosone dehydrogenase; NHL repeat containing protein; KEGG: ccs:CCNA_01575 hypothetical protein YP_003592674.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cak:Caul_1765 oxidoreductase domain-containing protein YP_003592675.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01576 transporter YP_003592676.1 KEGG: ccs:CCNA_01577 2-keto-4-pentenoate hydratase family protein YP_003592677.1 PFAM: Penicillinase repressor; KEGG: ccs:CCNA_01578 beta-lactamase repressor YP_003592678.1 KEGG: ccs:CCNA_00936 hypothetical protein YP_003592679.1 KEGG: ccs:CCNA_00935 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003592680.1 KEGG: cak:Caul_1772 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_003592681.1 TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; KEGG: cak:Caul_1771 HAD family hydrolase; PFAM: trehalose-phosphatase YP_003592682.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_3861 TonB-dependent receptor, plug YP_003592683.1 PFAM: glycosyl hydrolase 15-related; KEGG: cak:Caul_1778 glycosyl hydrolase 15-related YP_003592684.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: ccs:CCNA_01579 cell wall degradation protein YP_003592685.1 PFAM: protein of unknown function DUF882; KEGG: ccr:CC_1512 hypothetical protein YP_003592686.1 KEGG: ccs:CCNA_01581 hypothetical protein YP_003592687.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ccs:CCNA_01582 hypothetical protein YP_003592688.1 KEGG: ccs:CCNA_01583 phosphate-binding protein YP_003592689.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: nar:Saro_0331 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_003592690.1 PFAM: protein of unknown function DUF1636; KEGG: nar:Saro_0329 hypothetical protein YP_003592691.1 KEGG: cak:Caul_0754 hypothetical protein YP_003592692.1 PFAM: AbgT transporter; KEGG: ccs:CCNA_01696 aminobenzoyl-glutamate transport protein YP_003592693.1 KEGG: ccs:CCNA_01584 multimodular transpeptidase-transglycosylase PBP 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003592694.1 PFAM: electron transport protein SCO1/SenC; protein of unknown function DUF461; KEGG: ccs:CCNA_03618 SCO1/SenC family protein YP_003592695.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03615 TonB dependent receptor YP_003592696.1 KEGG: ccs:CCNA_03614 hypothetical protein YP_003592697.1 KEGG: ccs:CCNA_01364 NifR3-like protein; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS YP_003592698.1 KEGG: ccs:CCNA_01365 aspartyl protease PerP YP_003592699.1 KEGG: cak:Caul_2045 hypothetical protein YP_003592700.1 PFAM: protein of unknown function DUF1289; KEGG: ccs:CCNA_01366 Fe-S protein YP_003592701.1 KEGG: ccs:CCNA_01367 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003592702.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: cak:Caul_2048 acyl-CoA dehydrogenase domain-containing protein YP_003592703.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_01369 acyl-CoA dehydrogenase, short-chain specific YP_003592704.1 KEGG: hypothetical protein YP_003592705.1 KEGG: cak:Caul_2050 hypothetical protein YP_003592706.1 KEGG: ccs:CCNA_01371 hypothetical protein YP_003592707.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_01372 lysine decarboxylase family YP_003592708.1 KEGG: ccs:CCNA_01373 hypothetical protein YP_003592709.1 KEGG: ccs:CCNA_01374 Fe-S cluster assembly ABC-type transport system, permease and ATPase components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003592710.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_01375 lactoylglutathione lyase YP_003592711.1 KEGG: cak:Caul_2057 hypothetical protein YP_003592712.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_01376 glutathione S-transferase YP_003592713.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: cak:Caul_1779 amylo-alpha-16-glucosidase YP_003592714.1 PFAM: glycosyl transferase group 1; KEGG: pzu:PHZ_p0023 glycosyltransferase YP_003592715.1 KEGG: ccs:CCNA_01377 hypothetical protein YP_003592716.1 KEGG: ccs:CCNA_01378 protein-L-isoaspartate O-methyltransferase YP_003592717.1 KEGG: ccs:CCNA_01379 type I secretion outer membrane protein rsaFb; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_003592718.1 PFAM: Protein of unknown function DUF2497; KEGG: ccs:CCNA_01380 pole-organizing protein PopZ YP_003592719.1 KEGG: ccs:CCNA_01381 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_003592720.1 KEGG: mrd:Mrad2831_3383 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003592721.1 KEGG: sml:Smlt0115 beta-lactamase precursor (cephalosporinase); PFAM: beta-lactamase; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat YP_003592722.1 PFAM: Domain of unknown function DUF1801; KEGG: ccs:CCNA_01383 hypothetical protein YP_003592723.1 PFAM: Amidase; KEGG: ccs:CCNA_01384 amidase family protein YP_003592724.1 TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ccs:CCNA_01385 predicted rRNA methylase; SMART: RNA-binding S4 domain protein YP_003592725.1 KEGG: ccs:CCNA_01386 hypothetical protein YP_003592726.1 PFAM: (Uracil-5)-methyltransferase; KEGG: ccs:CCNA_01387 tRNA (uracil-5-)-methyltransferase YP_003592727.1 PFAM: acyltransferase 3; KEGG: ccs:CCNA_01389 acetyltransferase YP_003592728.1 PFAM: YCII-related; KEGG: mno:Mnod_1364 YCII-related YP_003592729.1 KEGG: ccs:CCNA_01390 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003592730.1 KEGG: ccs:CCNA_01392 glycosyltransferase involved in cell wall biogenesis YP_003592731.1 PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01393 soluble lytic murein transglycosylase YP_003592732.1 KEGG: ccs:CCNA_01394 uracil DNA glycosylase superfamily protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily YP_003592733.1 KEGG: ccs:CCNA_01395 electron transfer flavoprotein-ubiquinone oxidoreductase; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003592734.1 PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; KEGG: ccs:CCNA_01396 tetratricopeptide repeat family protein YP_003592735.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: ccs:CCNA_01397 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase domain protein; GHMP kinase YP_003592736.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ccs:CCNA_01398 peptidyl-prolyl cis-trans isomerase YP_003592737.1 KEGG: bur:Bcep18194_C7230 hypothetical protein YP_003592738.1 KEGG: ccs:CCNA_01399 ammonium transporter/methylammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003592739.1 PFAM: nitrogen regulatory protein P-II; KEGG: ccs:CCNA_01400 nitrogen regulatory protein GlnK YP_003592740.1 PFAM: protein of unknown function DUF486; KEGG: cak:Caul_2172 hypothetical protein YP_003592741.1 KEGG: pzu:PHZ_c1362 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_003592742.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: ccs:CCNA_01403 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit YP_003592743.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: ccs:CCNA_01404 glycyl-tRNA synthetase subunit beta YP_003592744.1 PFAM: cytochrome C class I; KEGG: bja:bll5053 cytochrome C binding protein YP_003592745.1 PFAM: Uncharacterised conserved protein UCP07580; KEGG: ccs:CCNA_01406 predicted metal-dependent hydrolase YP_003592746.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_01407 hypothetical protein YP_003592747.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_01408 phosphohydrolase, MutT/NUDIX family YP_003592748.1 PFAM: beta-lactamase; KEGG: ttu:TERTU_2036 beta-lactamase YP_003592749.1 KEGG: gau:GAU_3452 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003592750.1 KEGG: ccs:CCNA_01409 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_003592751.1 PFAM: thiamine biosynthesis Thi4 protein; KEGG: ccs:CCNA_01410 cyclohexanone monooxygenase YP_003592752.1 PFAM: Protein of unknown function DUF2147; KEGG: cak:Caul_3056 hypothetical protein YP_003592753.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_01412 acyl-CoA dehydrogenase, short-chain specific YP_003592754.1 PFAM: phosphoglycerate mutase; KEGG: ccs:CCNA_01413 phosphoglycerate mutase family protein YP_003592755.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_01414 3-hydroxyisobutyryl-CoA hydrolase YP_003592756.1 KEGG: ccs:CCNA_01415 methyltransferase YP_003592757.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: ccs:CCNA_01416 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003592758.1 TIGRFAM: 5-aminolevulinic acid synthase; KEGG: ccs:CCNA_01417 5-aminolevulinic acid synthase; PFAM: aminotransferase class I and II YP_003592759.1 PFAM: ROSMUCR transcriptional regulator; KEGG: ccs:CCNA_01418 transcriptional regulator YP_003592760.1 KEGG: ccs:CCNA_01419 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_003592761.1 PFAM: ATP-cone domain protein; KEGG: ccs:CCNA_01420 regulatory protein YP_003592762.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: ccs:CCNA_01421 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003592763.1 KEGG: ccs:CCNA_01422 N utilization substance protein B; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_003592764.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: ccs:CCNA_01423 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003592765.1 KEGG: ccs:CCNA_01424 hypothetical protein YP_003592766.1 TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: ccs:CCNA_01425 H+ translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase YP_003592767.1 KEGG: ccs:CCNA_01426 chemotaxis receiver domain protein cheYIII; PFAM: response regulator receiver; SMART: response regulator receiver YP_003592768.1 PFAM: SmpA/OmlA domain protein; KEGG: ccs:CCNA_01427 lipoprotein, SmpA/OmlA family YP_003592769.1 KEGG: ccs:CCNA_01429 ubiquinol-cytochrome C reductase chaperone YP_003592770.1 PFAM: protein of unknown function DUF177; KEGG: ccs:CCNA_01430 hypothetical protein YP_003592771.1 KEGG: ccs:CCNA_01431 fatty acid/phospholipid synthesis protein PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_003592772.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: ccs:CCNA_01432 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_003592773.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: cak:Caul_3032 integration host factor subunit alpha; SMART: histone family protein DNA-binding protein YP_003592774.1 KEGG: ccs:CCNA_01434 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003592775.1 KEGG: cak:Caul_3030 hypothetical protein YP_003592776.1 KEGG: ccs:CCNA_01437 transglycosylase associated protein YP_003592777.1 KEGG: cak:Caul_3027 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase YP_003592778.1 PFAM: protein of unknown function DUF839; KEGG: ccs:CCNA_01439 dTDP-glucose 4,6-dehydratase YP_003592779.1 KEGG: ccs:CCNA_01440 LSU ribosomal protein L13P; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_003592780.1 PFAM: ribosomal protein S9; KEGG: ccs:CCNA_01441 SSU ribosomal protein S9P YP_003592781.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: ccs:CCNA_01442 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding YP_003592782.1 KEGG: ccs:CCNA_01444 poly(3-hydroxyalkanoate) polymerase; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold YP_003592783.1 KEGG: ccs:CCNA_01445 hypothetical protein YP_003592784.1 PFAM: aminotransferase class I and II; KEGG: ccs:CCNA_01446 aminotransferase AatC YP_003592785.1 KEGG: ccs:CCNA_01447 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein YP_003592786.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: ccs:CCNA_01448 fructose-1,6-bisphosphatase; PFAM: GlpX family protein YP_003592787.1 KEGG: ccs:CCNA_01449 fructose-1,6-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase YP_003592788.1 KEGG: ccs:CCNA_01450 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_003592789.1 KEGG: ccs:CCNA_01451 cold shock protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003592790.1 PFAM: protein of unknown function DUF192; KEGG: ccs:CCNA_01452 hypothetical protein YP_003592791.1 PFAM: ETC complex I subunit conserved region; KEGG: ccs:CCNA_01453 electron transport complex I subunit, NADH-ubiquinone oxidoreductase YP_003592792.1 KEGG: vfm:VFMJ11_A0742 hypothetical protein YP_003592793.1 SMART: HNH nuclease; KEGG: bcm:Bcenmc03_0022 hypothetical protein YP_003592794.1 KEGG: bcm:Bcenmc03_0023 AAA ATPase YP_003592795.1 KEGG: bgl:bglu_2p0410 hypothetical protein YP_003592796.1 KEGG: gbm:Gbem_3672 hypothetical protein YP_003592797.1 KEGG: mch:Mchl_5487 hypothetical protein YP_003592798.1 KEGG: psa:PST_3198 piwi domain-containing protein YP_003592799.1 manually curated; KEGG: xca:xccb100_3097 Sir2-family regulator YP_003592800.1 KEGG: eba:ebA2389 hypothetical protein YP_003592801.1 KEGG: ara:Arad_7847 hypothetical protein YP_003592802.1 KEGG: nwi:Nwi_0265 XRE family transcriptional regulator; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003592803.1 KEGG: nwi:Nwi_0266 hypothetical protein YP_003592804.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ppu:PP_3974 LysR family transcriptional regulator YP_003592805.1 PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_A1805 YjgF family translation initiation inhibitor YP_003592806.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: ccs:CCNA_03459 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein YP_003592807.1 PFAM: GAF domain protein; KEGG: bgl:bglu_1g18320 diguanylate cyclase YP_003592809.1 KEGG: fre:Franean1_3883 diguanylate phosphodiesterase YP_003592810.1 KEGG: cak:Caul_0480 nuclease; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein) YP_003592811.1 KEGG: gdj:Gdia_2762 hypothetical protein YP_003592812.1 KEGG: pna:Pnap_2066 hypothetical protein YP_003592813.1 KEGG: ret:RHE_PF00081 hypothetical protein YP_003592814.1 KEGG: eli:ELI_05575 geranyltranstransferase YP_003592815.1 KEGG: avi:Avi_5950 crocetin dialdehyde; PFAM: Carotenoid oxygenase YP_003592816.1 KEGG: avi:Avi_5910 hypothetical protein YP_003592817.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_2062 major facilitator transporter YP_003592818.1 KEGG: tcu:Tcur_2591 GntR domain protein YP_003592819.1 PFAM: Aldehyde Dehydrogenase; KEGG: pfo:Pfl01_2364 aldehyde dehydrogenase YP_003592820.1 KEGG: nar:Saro_2879 hypothetical protein YP_003592821.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: avi:Avi_5062 possible oxidoreductase YP_003592822.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: amr:AM1_6141 3-oxoacyl-(acyl carrier protein) reductase YP_003592823.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1901 TonB-dependent receptor YP_003592824.1 KEGG: fre:Franean1_5931 hypothetical protein YP_003592825.1 KEGG: nar:Saro_2879 hypothetical protein YP_003592826.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: avi:Avi_7417 oxidoreductase YP_003592827.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1631 TonB-dependent receptor YP_003592828.1 KEGG: bxe:Bxe_A1380 oxygenase; manually curated; PFAM: flavin reductase domain protein FMN-binding YP_003592829.1 KEGG: afo:Afer_1087 short-chain dehydrogenase/reductase SDR YP_003592830.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nar:Saro_0794 short-chain dehydrogenase/reductase SDR YP_003592831.1 KEGG: bpt:Bpet1427 transcriptional regulatory protein; manually curated; PFAM: regulatory protein IclR YP_003592832.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nar:Saro_1875 short-chain dehydrogenase/reductase SDR YP_003592833.1 PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_1774 alkanal monooxygenase YP_003592834.1 KEGG: mmi:MMAR_1630 transcriptional regulatory protein YP_003592835.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pla:Plav_0472 alpha/beta hydrolase domain-containing protein YP_003592836.1 KEGG: rha:RHA1_ro02986 benzaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003592837.1 KEGG: avi:Avi_5950 crocetin dialdehyde; PFAM: Carotenoid oxygenase YP_003592838.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: avi:Avi_5440 hypothetical protein YP_003592839.1 KEGG: bbt:BBta_5587 enzyme with isomerase/decarboxylase activity; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003592840.1 PFAM: monooxygenase FAD-binding; KEGG: pfs:PFLU4110 3-(3-hydroxy-phenyl)propionate hydroxylase, FAD/NAD(P)-binding YP_003592841.1 KEGG: bpt:Bpet1427 transcriptional regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_003592842.1 PFAM: Carotenoid oxygenase; KEGG: avi:Avi_5950 crocetin dialdehyde YP_003592843.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO6282 3-oxoacyl-[acyl-carrier protein] reductase YP_003592844.1 KEGG: mbt:JTY_3080 transcriptional regulatory protein; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003592845.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_0180 major facilitator transporter YP_003592846.1 KEGG: eca:ECA0249 hypothetical protein YP_003592847.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: swi:Swit_1573 TonB-dependent receptor YP_003592848.1 PFAM: major facilitator superfamily MFS_1; KEGG: avi:Avi_5599 MFS permease YP_003592849.1 PFAM: regulatory protein TetR; KEGG: cvi:CV_0711 TetR family transcriptional regulator YP_003592850.1 KEGG: cak:Caul_3769 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MASE1 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003592851.1 KEGG: dra:DR_1628 transcriptional activator TipA; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003592852.1 TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; KEGG: ccs:CCNA_01168 3-ketoacyl-CoA thiolase YP_003592853.1 PFAM: coenzyme A transferase; KEGG: ccs:CCNA_02488 acetate/3-ketoacid CoA transferase, subunit A YP_003592854.1 TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; KEGG: cak:Caul_3846 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding YP_003592855.1 PFAM: acriflavin resistance protein; KEGG: rso:RS03086 transporter transmembrane protein YP_003592856.1 KEGG: psb:Psyr_2620 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003592857.1 KEGG: avn:Avin_31150 response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003592858.1 KEGG: avn:Avin_31140 sensory histidine protein kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003592859.1 PFAM: glycosyl hydrolase family 3 domain protein; KEGG: cak:Caul_3288 beta-glucosidase YP_003592860.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: ccs:CCNA_01029 alpha-L-rhamnosidase YP_003592861.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: cak:Caul_3608 L-lactate dehydrogenase YP_003592862.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hba:Hbal_2755 short-chain dehydrogenase/reductase SDR YP_003592863.1 KEGG: met:M446_4911 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_003592864.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: avn:Avin_09220 mandelate racemase/muconate lactonizing enzyme YP_003592865.1 KEGG: cak:Caul_3609 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003592866.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hba:Hbal_2758 short-chain dehydrogenase/reductase SDR YP_003592867.1 PFAM: amidohydrolase; KEGG: bac:BamMC406_1211 amidohydrolase YP_003592868.1 PFAM: RhaT l-rhamnose-proton symport 2; KEGG: hba:Hbal_2761 RhaT L-rhamnose-proton symport 2 YP_003592869.1 KEGG: met:M446_4911 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_003592870.1 KEGG: swi:Swit_1100 hypothetical protein YP_003592871.1 KEGG: ccs:CCNA_01464 hypothetical protein YP_003592872.1 PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_1609 TetR family transcriptional regulator YP_003592873.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c2111 TonB-dependent receptor YP_003592874.1 KEGG: cak:Caul_2402 hypothetical protein YP_003592875.1 KEGG: fre:Franean1_3682 TetR family transcriptional regulator; manually curated; PFAM: regulatory protein TetR YP_003592876.1 PFAM: alpha-L-rhamnosidase; KEGG: ote:Oter_3716 alpha-L-rhamnosidase YP_003592877.1 KEGG: ccs:CCNA_03299 outer membrane protein OprM; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003592878.1 PFAM: acriflavin resistance protein; KEGG: ccs:CCNA_03301 cation/multidrug efflux pump AcrB YP_003592879.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: aba:Acid345_2025 alpha/beta hydrolase YP_003592880.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_1790 TonB-dependent receptor YP_003592881.1 PFAM: major facilitator superfamily MFS_1; KEGG: cak:Caul_1791 major facilitator transporter YP_003592882.1 PFAM: Luciferase-like, subgroup; KEGG: ccs:CCNA_01227 nitrilotriacetate monooxygenase YP_003592883.1 PFAM: isochorismatase hydrolase; KEGG: cak:Caul_1793 isochorismatase hydrolase YP_003592884.1 KEGG: cak:Caul_1794 hypothetical protein YP_003592885.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cak:Caul_1795 flavin reductase domain-containing protein YP_003592886.1 KEGG: cak:Caul_1796 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_003592887.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cak:Caul_1797 NAD-dependent epimerase/dehydratase YP_003592888.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cak:Caul_1798 glyoxalase/bleomycin resistance protein/dioxygenase YP_003592889.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_1799 short-chain dehydrogenase/reductase SDR YP_003592890.1 KEGG: cak:Caul_1800 taurine catabolism dioxygenase TauD/TfdA; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_003592891.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: cak:Caul_1801 Rieske (2Fe-2S) domain-containing protein YP_003592892.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: cak:Caul_1802 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003592893.1 PFAM: Acetamidase/Formamidase; KEGG: cak:Caul_1803 acetamidase/formamidase YP_003592894.1 KEGG: cak:Caul_1804 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003592895.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_1601 hypothetical protein YP_003592896.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cpi:Cpin_5381 cupin 2 conserved barrel domain protein YP_003592897.1 KEGG: sfr:Sfri_3018 hypothetical protein YP_003592898.1 KEGG: cak:Caul_3607 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome C class I YP_003592899.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: cak:Caul_3606 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_003592900.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cak:Caul_3605 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_003592901.1 SMART: TRASH domain protein; manually curated; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: mno:Mnod_7880 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase YP_003592902.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: sal:Sala_2543 MerR family transcriptional regulator; SMART: regulatory protein MerR YP_003592903.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: atc:AGR_L_2018 tetrahydropteroyltriglutamate methyltransferase YP_003592904.1 PFAM: Domain of unknown function DUF1852; KEGG: atc:AGR_L_2017 hypothetical protein YP_003592905.1 KEGG: atc:AGR_L_593 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003592906.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pde:Pden_3117 short-chain dehydrogenase/reductase SDR YP_003592907.1 KEGG: dfe:Dfer_0342 hypothetical protein YP_003592908.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: pat:Patl_3904 TonB-dependent receptor YP_003592909.1 KEGG: cak:Caul_3282 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003592910.1 KEGG: cak:Caul_4079 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003592911.1 PFAM: FecR protein; KEGG: cak:Caul_4078 anti-FecI sigma factor, FecR YP_003592912.1 PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; TonB-dependent receptor; KEGG: cak:Caul_4077 cyclic nucleotide-binding protein YP_003592913.1 KEGG: cak:Caul_4076 phosphotransferase domain-containing protein YP_003592914.1 KEGG: sma:SAV_1026 secreted protein YP_003592915.1 KEGG: xcv:XCV3214 beta-galactosidase; PFAM: glycosyl hydrolase family 35 YP_003592916.1 PFAM: glycosyl hydrolase family 97; KEGG: ccs:CCNA_00838 alpha-glucosidase YP_003592917.1 KEGG: cak:Caul_4083 glycosyl hydrolase; PFAM: glycosyl hydrolase family 2 sugar binding; glycosyl hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycosyl hydrolase family 2 TIM barrel YP_003592918.1 KEGG: ccs:CCNA_00607 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003592919.1 KEGG: cak:Caul_1548 IclR family transcriptional regulator; PFAM: regulatory protein IclR; SMART: regulatory protein IclR YP_003592920.1 PFAM: protein of unknown function DUF718; KEGG: cak:Caul_1543 hypothetical protein YP_003592921.1 KEGG: oan:Oant_0318 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003592922.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_1544 short-chain dehydrogenase/reductase SDR YP_003592923.1 KEGG: cak:Caul_1545 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein YP_003592924.1 KEGG: cak:Caul_1546 D-galactarate dehydratase/altronate hydrolase-like protein YP_003592925.1 KEGG: cak:Caul_1547 pyridoxal 4-dehydrogenase; PFAM: aldo/keto reductase YP_003592926.1 PFAM: amidohydrolase; KEGG: cak:Caul_1549 amidohydrolase YP_003592927.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: atc:AGR_C_5103 hypothetical zinc-type alcohol dehydrogenase-like protein in TSR-MDOB intergenic region YP_003592928.1 KEGG: cak:Caul_1551 L-fucose transporter; TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1 YP_003592929.1 KEGG: ccs:CCNA_00837 alpha-L-fucosidase; PFAM: glycosyl hydrolase family 29 (alpha-L-fucosidase); SMART: glycosyl hydrolase family 29 (alpha-L-fucosidase) YP_003592930.1 KEGG: ote:Oter_1363 hypothetical protein YP_003592931.1 KEGG: pzu:PHZ_c2842 Na+/H+ antiporter; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA YP_003592932.1 KEGG: ccs:CCNA_01709 hypothetical protein YP_003592933.1 PFAM: FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: ccs:CCNA_01710 GMC family oxidoreductase YP_003592934.1 PFAM: peptidase M56 BlaR1; Ankyrin; KEGG: ccs:CCNA_01711 transcriptional regulator YP_003592935.1 PFAM: Penicillinase repressor; KEGG: ccs:CCNA_01712 beta-lactamase repressor YP_003592936.1 KEGG: cak:Caul_3282 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003592937.1 PFAM: FecR protein; KEGG: cak:Caul_3281 anti-FecI sigma factor, FecR YP_003592938.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: pfs:PFLU2202 TonB-dependent receptor YP_003592939.1 PFAM: amidohydrolase; WD40 domain protein beta Propeller; KEGG: ami:Amir_5049 amidohydrolase YP_003592940.1 PFAM: protein of unknown function DUF214; KEGG: ccs:CCNA_01834 oxidoreductase YP_003592941.1 KEGG: ccs:CCNA_01835 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003592942.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ccs:CCNA_01836 acyl-CoA thioesterase I/lysophospholipase YP_003592943.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pag:PLES_29681 TonB-dependent receptor YP_003592944.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: ccs:CCNA_01663 potassium-transporting ATPase A chain; PFAM: K transporting ATPase A subunit YP_003592945.1 KEGG: ccs:CCNA_01664 potassium-transporting ATPase B chain; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003592946.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: ccs:CCNA_01665 potassium-transporting ATPase C chain; PFAM: K transporting ATPase KdpC subunit YP_003592947.1 KEGG: ccs:CCNA_01666 osmosensitive K+ channel histidine kinase KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003592948.1 KEGG: ccs:CCNA_01667 two-component response regulator KdpE; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003592949.1 KEGG: cak:Caul_2068 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003592950.1 KEGG: cak:Caul_2069 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003592951.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: cak:Caul_2070 carbohydrate kinase; PFAM: shikimate kinase YP_003592952.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: cak:Caul_2071 SMP-30/gluconolaconase/LRE domain-containing protein YP_003592953.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: cak:Caul_2072 SMP-30/gluconolaconase/LRE domain-containing protein YP_003592954.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2073 TonB-dependent receptor YP_003592955.1 PFAM: TrkA-C domain protein; Citrate transporter; KEGG: cak:Caul_3039 TrkA domain-containing protein YP_003592956.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rru:Rru_A3715 lipopolysaccharide biosynthesis YP_003592957.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: mmr:Mmar10_1691 polysaccharide export protein YP_003592958.1 KEGG: bav:BAV2645 capsular polysaccharide biosynthesis protein YP_003592959.1 KEGG: cak:Caul_1595 O-antigen polymerase; manually curated; PFAM: O-antigen polymerase YP_003592960.1 PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: rru:Rru_A3717 glycosyl transferase WecB/TagA/CpsF YP_003592961.1 KEGG: ade:Adeh_2455 UDP-phosphate galactosephosphotransferase; PFAM: sugar transferase YP_003592962.1 PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_0962 glycosyl transferase family protein YP_003592963.1 PFAM: glycosyl transferase family 2; KEGG: hba:Hbal_1966 glycosyl transferase family 2 YP_003592964.1 KEGG: sus:Acid_0551 translaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_003592965.1 manually curated; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: sus:Acid_0421 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003592966.1 KEGG: sus:Acid_0420 sugar isomerase YP_003592967.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: sus:Acid_0418 GHMP kinase YP_003592968.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: bpr:GBP346_A3421 D-glycero-D-manno-heptose 7-phosphate kinase YP_003592969.1 PFAM: Nucleotidyl transferase; KEGG: cak:Caul_4933 histidinol-phosphate phosphatase family protein YP_003592970.1 KEGG: pzu:PHZ_c0704 transcriptional activator FtrB; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003592971.1 KEGG: pzu:PHZ_c0700 6-pyruvoyl tetrahydrobiopterin synthase YP_003592972.1 KEGG: ami:Amir_2865 hypothetical protein YP_003592973.1 KEGG: ccs:CCNA_01466 hypothetical protein YP_003592974.1 TIGRFAM: cytochrome C oxidase, cbb3-type, subunit I; KEGG: ccr:CC_1401 cytochrome C oxidase, CcoN subunit; PFAM: cytochrome C oxidase subunit I YP_003592975.1 KEGG: ccs:CCNA_01468 cytochrome Cbb3 oxidase, cytochrome C subunit CcoO; TIGRFAM: cytochrome C oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO YP_003592976.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: ccs:CCNA_01469 cytochrome Cbb3 oxidase, subunit CcoQ YP_003592977.1 KEGG: ccs:CCNA_01470 cytochrome Cbb3 oxidase, diheme subunit, membrane-bound CcoP; TIGRFAM: cytochrome C oxidase, cbb3-type, subunit III; PFAM: cytochrome C class I YP_003592978.1 TIGRFAM: cytochrome C oxidase accessory protein CcoG; KEGG: ccs:CCNA_01471 polyferredoxin protein FixG YP_003592979.1 PFAM: FixH family protein; KEGG: ccs:CCNA_01472 cation pump-linked membrane protein FixH YP_003592980.1 KEGG: ccs:CCNA_01473 E1-E2 cation pump ATPase FixI; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003592981.1 KEGG: ccs:CCNA_01474 cytochrome Cbb3 oxidase maturation protein CcoS; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type YP_003592982.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: pzu:PHZ_c2806 oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein YP_003592983.1 PFAM: OmpW family protein; KEGG: ccs:CCNA_01475 OmpW family outer membrane protein YP_003592984.1 PFAM: Luciferase-like, subgroup; KEGG: ccs:CCNA_01227 nitrilotriacetate monooxygenase YP_003592985.1 PFAM: isochorismatase hydrolase; KEGG: cak:Caul_1793 isochorismatase hydrolase YP_003592986.1 KEGG: ccs:CCNA_01485 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_003592987.1 KEGG: cak:Caul_3616 galactose 1-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain YP_003592988.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cak:Caul_3615 hypothetical protein YP_003592989.1 KEGG: ccs:CCNA_01488 galactonate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003592990.1 KEGG: ccs:CCNA_01489 alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein YP_003592991.1 KEGG: ote:Oter_4283 alpha/beta hydrolase domain-containing protein YP_003592992.1 PFAM: FAD dependent oxidoreductase; KEGG: ccs:CCNA_01490 NAD(FAD)-utilizing dehydrogenase YP_003592993.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cak:Caul_2058 NADH:flavin oxidoreductase/NADH oxidase YP_003592994.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cak:Caul_4997 mercuric reductase YP_003592995.1 KEGG: cak:Caul_4996 hypothetical protein YP_003592996.1 KEGG: ccs:CCNA_01491 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003592997.1 KEGG: ccs:CCNA_01492 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003592998.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ccs:CCNA_01493 cysteine synthase YP_003592999.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: ccs:CCNA_00683 hypothetical protein YP_003593000.1 KEGG: ccs:CCNA_01494 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_003593001.1 KEGG: ccs:CCNA_01495 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_003593002.1 TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; KEGG: ccs:CCNA_01496 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003593003.1 KEGG: ccs:CCNA_01497 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003593004.1 PFAM: protein of unknown function DUF35; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: ccs:CCNA_01498 DNA-dependent DNA polymerase III subunit alpha YP_003593005.1 KEGG: ccs:CCNA_01499 acetyl-CoA acetyltransferase YP_003593006.1 KEGG: ccs:CCNA_01500 hypothetical protein YP_003593007.1 KEGG: ccs:CCNA_01501 protein kinase C-like superfamily protein YP_003593008.1 PFAM: aminoglycoside phosphotransferase; KEGG: ccs:CCNA_01503 phosphotransferase family protein YP_003593009.1 PFAM: protein of unknown function DUF808; KEGG: ccs:CCNA_01502 hypothetical protein YP_003593010.1 KEGG: ccs:CCNA_01504 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003593011.1 KEGG: ccs:CCNA_01505 hypothetical protein YP_003593012.1 KEGG: ccs:CCNA_01506 cystine transport ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593013.1 KEGG: ccs:CCNA_01507 cystine transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003593014.1 KEGG: ccs:CCNA_01508 cystine-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_003593015.1 KEGG: ccs:CCNA_01509 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein YP_003593016.1 KEGG: cak:Caul_2903 hypothetical protein YP_003593017.1 KEGG: ccr:CC_1443 hypothetical protein YP_003593018.1 PFAM: fatty acid hydroxylase; KEGG: ccs:CCNA_01511 sterol desaturase family protein YP_003593019.1 PFAM: esterase; KEGG: ttu:TERTU_0460 peptide-methionine-S-oxide reductase YP_003593020.1 KEGG: ccs:CCNA_01517 hypothetical protein YP_003593021.1 KEGG: ccr:CC_1451 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003593022.1 PFAM: UspA domain protein; KEGG: ccs:CCNA_01519 universal stress protein family YP_003593023.1 KEGG: ccs:CCNA_01520 hypothetical protein YP_003593024.1 KEGG: ccs:CCNA_01521 hypothetical protein YP_003593025.1 KEGG: ccs:CCNA_01522 ATP-dependent protease subunit; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003593026.1 KEGG: ccs:CCNA_01523 acetyltransferase FlmH; TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; PFAM: GCN5-related N-acetyltransferase YP_003593027.1 KEGG: ccs:CCNA_01524 FlbA protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat YP_003593028.1 PFAM: flagellar FlbT family protein; KEGG: ccs:CCNA_01525 flagellar biosynthesis repressor FlbT YP_003593029.1 PFAM: flagellar FlaF family protein; KEGG: ccs:CCNA_01526 flagellar biosynthesis regulatory protein FlaF YP_003593030.1 PFAM: flagellin domain protein; KEGG: ccs:CCNA_01527 flagellin FljL YP_003593031.1 PFAM: flagellin domain protein; KEGG: cak:Caul_3646 flagellin domain-containing protein YP_003593032.1 KEGG: ccs:CCNA_01529 hypothetical protein YP_003593033.1 PFAM: flagellin domain protein; KEGG: ccs:CCNA_01530 flagellin YP_003593034.1 KEGG: ccs:CCNA_01531 acetyltransferase; TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; PFAM: GCN5-related N-acetyltransferase YP_003593035.1 KEGG: ccs:CCNA_01532 regulatory protein FlaY YP_003593036.1 KEGG: ccs:CCNA_01533 hypothetical protein YP_003593037.1 KEGG: ccs:CCNA_01534 hypothetical protein YP_003593038.1 KEGG: ccs:CCNA_01535 single-strand DNA binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003593039.1 KEGG: ccs:CCNA_01536 hypothetical protein YP_003593040.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: ccs:CCNA_01538 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_003593041.1 PFAM: Methyltransferase type 12; KEGG: gau:GAU_3119 methyltransferase YP_003593042.1 KEGG: ccs:CCNA_00833 Trp repressor binding protein; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase YP_003593043.1 PFAM: Pirin domain protein; KEGG: ccs:CCNA_01539 pirin YP_003593044.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ccs:CCNA_01541 transcriptional regulator, LysR family YP_003593045.1 KEGG: ccs:CCNA_01163 ice nucleation protein YP_003593046.1 KEGG: ccs:CCNA_01543 chaperone protein DnaK YP_003593047.1 PFAM: HI0933 family protein; KEGG: ccs:CCNA_01545 NAD(FAD)-utilizing dehydrogenase YP_003593048.1 KEGG: ccs:CCNA_01546 DEAD-box RNA helicase-like protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003593049.1 KEGG: pzu:PHZ_c2205 hypothetical protein YP_003593050.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_01789 acetyltransferase, GNAT family YP_003593051.1 KEGG: cak:Caul_2766 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_003593052.1 TIGRFAM: CTP synthase; KEGG: ccs:CCNA_01791 CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003593053.1 KEGG: ccs:CCNA_01792 LSU ribosomal protein L32P; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003593054.1 PFAM: Peptidase A2A, retrovirus RVP subgroup; KEGG: ccs:CCNA_01793 hypothetical protein YP_003593055.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_01794 enoyl-CoA hydratase/isomerase family YP_003593056.1 TIGRFAM: enolase; KEGG: ccs:CCNA_01795 enolase; PFAM: Enolase-like YP_003593057.1 PFAM: Septum formation initiator; KEGG: ccs:CCNA_01797 septum formation initiator YP_003593058.1 TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; KEGG: ccs:CCNA_01799 pyruvate dehydrogenase E1 component alpha subunit; PFAM: dehydrogenase E1 component YP_003593059.1 PFAM: Transketolase central region; biotin/lipoyl attachment domain-containing protein; Transketolase domain protein; KEGG: cak:Caul_2759 pyruvate dehydrogenase subunit beta YP_003593060.1 KEGG: ccs:CCNA_01803 pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase component; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003593061.1 KEGG: ccs:CCNA_01804 glutathione peroxidase; PFAM: glutathione peroxidase YP_003593062.1 KEGG: ccs:CCNA_01805 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003593063.1 KEGG: ccs:CCNA_01806 ferritin-like domain protein YP_003593064.1 PFAM: DoxX family protein; KEGG: cak:Caul_2754 DoxX family protein YP_003593065.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_01807 acyl-acyl carrier protein synthetase YP_003593066.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: ccs:CCNA_01809 lipoic acid synthetase; PFAM: Radical SAM domain protein YP_003593067.1 PFAM: cyclase/dehydrase; KEGG: ccs:CCNA_01810 cytosolic protein YP_003593068.1 KEGG: cak:Caul_2601 hypothetical protein YP_003593069.1 KEGG: ccs:CCNA_01812 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003593070.1 manually curated; TIGRFAM: TIM-barrel protein, nifR3 family; KEGG: ccs:CCNA_01813 tRNA-dihydrouridine synthase; PFAM: dihydrouridine synthase DuS YP_003593071.1 KEGG: ccs:CCNA_01814 nitrogen regulation protein NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003593072.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: ccs:CCNA_01815 nitrogen assimilation regulatory protein; SMART: response regulator receiver; AAA ATPase YP_003593073.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: ccs:CCNA_01816 nitrogen regulation protein NtrY; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003593074.1 KEGG: ccs:CCNA_01817 nitrogen assimilation regulatory protein NtrX; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_003593075.1 PFAM: aminotransferase class IV; KEGG: ccs:CCNA_01818 D-alanine aminotransferase YP_003593076.1 KEGG: ccs:CCNA_01819 RNA-binding protein, Hfq family; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003593077.1 KEGG: ccs:CCNA_01820 GTP-binding protein HflX; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related YP_003593078.1 KEGG: ccr:CC_1747 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_003593079.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01822 melibiose carrier protein YP_003593080.1 KEGG: cak:Caul_2734 adenosylcobinamide kinase; PFAM: cobalbumin biosynthesis protein YP_003593081.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01826 vitamin B12 receptor YP_003593082.1 PFAM: aminotransferase class I and II; KEGG: cak:Caul_2736 L-threonine-O-3-phosphate decarboxylase YP_003593083.1 KEGG: cak:Caul_2738 periplasmic binding protein YP_003593084.1 PFAM: transport system permease protein; KEGG: cak:Caul_2739 transport system permease protein YP_003593085.1 KEGG: cak:Caul_2740 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593086.1 KEGG: cak:Caul_2741 cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_003593087.1 KEGG: ccs:CCNA_02776 adenosylcobyric acid synthase (glutamine-hydrolysing); TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase YP_003593088.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: rpt:Rpal_0783 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003593089.1 KEGG: cak:Caul_2743 cobalamin 5'-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS YP_003593090.1 KEGG: mrd:Mrad2831_3990 hypothetical protein YP_003593091.1 KEGG: cak:Caul_2402 hypothetical protein YP_003593092.1 PFAM: protein of unknown function DUF303 acetylesterase ; glycosyl hydrolase family 2 sugar binding; KEGG: cak:Caul_2403 protein of unknown function DUF303 acetylesterase YP_003593093.1 KEGG: cak:Caul_2404 beta-glucosidase; PFAM: glycosyl hydrolase family 3 domain protein; PA14 domain protein; SMART: PA14 domain protein YP_003593094.1 PFAM: tryptophan halogenase; KEGG: cak:Caul_2406 tryptophan halogenase YP_003593095.1 KEGG: cak:Caul_2407 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_003593096.1 PFAM: SapC family protein; KEGG: cak:Caul_2408 SapC family protein YP_003593097.1 SMART: transcription factor jumonji jmjC domain protein; KEGG: cak:Caul_2409 hypothetical protein YP_003593098.1 PFAM: glycosyl hydrolase clan GH-D; Glycosyl hydrolase family 98 carbohydrate binding module; KEGG: cak:Caul_2412 alpha-galactosidase; SMART: Glycosyl hydrolase family 98 carbohydrate binding module YP_003593099.1 KEGG: ccs:CCNA_01488 galactonate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003593100.1 KEGG: cak:Caul_2413 glycosyl hydrolase; PFAM: glycosyl hydrolase family 43 YP_003593101.1 KEGG: cak:Caul_2414 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003593102.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: cak:Caul_2415 alpha-N-arabinofuranosidase; SMART: alpha-L-arabinofuranosidase domain protein YP_003593103.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2400 TonB-dependent receptor YP_003593104.1 KEGG: cak:Caul_2401 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003593105.1 KEGG: bid:Bind_1172 NtaA/SnaA/SoxA family monooxygenase YP_003593106.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: pfs:PFLU3691 hypothetical protein YP_003593107.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bra:BRADO4282 ferrodoxin homolog (AsfB-like) YP_003593108.1 PFAM: FAD dependent oxidoreductase; KEGG: avn:Avin_21930 oxidoreductase flavoprotein, AsfA YP_003593109.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: swi:Swit_2508 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_003593110.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_1386 TonB-dependent siderophore receptor YP_003593111.1 KEGG: cak:Caul_3458 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003593112.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_2656 LysR family transcriptional regulator YP_003593113.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cak:Caul_2657 binding-protein-dependent transport systems inner membrane component YP_003593114.1 KEGG: cak:Caul_2658 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593115.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: cak:Caul_2659 acyl-CoA dehydrogenase type 2 YP_003593116.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: cak:Caul_2660 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003593117.1 PFAM: class II aldolase/adducin family protein; KEGG: cak:Caul_2661 class II aldolase/adducin family protein YP_003593118.1 KEGG: cak:Caul_2662 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003593119.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2663 TonB-dependent receptor YP_003593120.1 PFAM: cysteine dioxygenase type I; KEGG: cak:Caul_2664 cysteine dioxygenase type I YP_003593121.1 KEGG: cak:Caul_2665 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003593122.1 PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_2666 glutathione S-transferase YP_003593123.1 KEGG: cak:Caul_2667 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup YP_003593124.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cak:Caul_2668 flavin reductase domain-containing protein YP_003593125.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_1277 short chain dehydrogenase YP_003593126.1 KEGG: ccs:CCNA_01863 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003593127.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_01864 transcriptional regulator, TetR family YP_003593128.1 KEGG: ccs:CCNA_01865 periplasmic multidrug efflux lipoprotein precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003593129.1 PFAM: acriflavin resistance protein; KEGG: ccs:CCNA_01866 cation/multidrug efflux pump acrB4 YP_003593130.1 KEGG: predicted protein YP_003593131.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bid:Bind_1436 LysR family transcriptional regulator YP_003593132.1 KEGG: rle:RL2517 hypothetical protein YP_003593133.1 KEGG: azc:AZC_1313 zinc-containing alcohol dehydrogenase superfamily protein; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003593134.1 PFAM: glycosyl hydrolase family 5; KEGG: dth:DICTH_0008 endoglucanase H YP_003593135.1 KEGG: ccs:CCNA_02895 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003593136.1 PFAM: tryptophan halogenase; KEGG: ccs:CCNA_02896 tryptophan halogenase YP_003593137.1 PFAM: tryptophan halogenase; KEGG: ccs:CCNA_02898 tryptophan halogenase YP_003593138.1 PFAM: tryptophan halogenase; KEGG: ccs:CCNA_02899 tryptophan halogenase YP_003593139.1 KEGG: ccs:CCNA_00654 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003593140.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cak:Caul_2954 molybdopterin oxidoreductase YP_003593141.1 KEGG: cak:Caul_2955 nitrite reductase (NAD(P)H), small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain YP_003593142.1 KEGG: cak:Caul_2956 nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region YP_003593143.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_00650 nitrate transporter YP_003593144.1 PFAM: NMT1/THI5 like domain protein; KEGG: cak:Caul_2958 nitrate transporter YP_003593145.1 PFAM: ANTAR domain protein; KEGG: ccs:CCNA_00648 nitrate response regulator NasT YP_003593146.1 TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; KEGG: ccs:CCNA_00647 nitrate transport ATP-binding protein NrtD; SMART: AAA ATPase YP_003593147.1 KEGG: ccs:CCNA_00646 nitrate transport permease protein NrtB; TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003593148.1 KEGG: ccs:CCNA_00645 nitrate binding protein NrtA YP_003593149.1 KEGG: ccs:CCNA_00644 hypothetical protein YP_003593150.1 KEGG: rmr:Rmar_1860 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver YP_003593151.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; KEGG: ote:Oter_2330 signal transduction histidine kinase, LytS YP_003593152.1 KEGG: hba:Hbal_2437 hypothetical protein YP_003593153.1 PFAM: sodium/hydrogen exchanger; KEGG: cak:Caul_1264 sodium/hydrogen exchanger YP_003593154.1 PFAM: alpha/beta hydrolase fold; KEGG: bmj:BMULJ_03337 chloride peroxidase YP_003593155.1 KEGG: pla:Plav_0517 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003593156.1 KEGG: cja:CJA_2305 hypothetical protein YP_003593157.1 PFAM: alpha/beta hydrolase fold; KEGG: cak:Caul_0299 alpha/beta hydrolase fold YP_003593158.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bja:blr0257 two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein YP_003593159.1 KEGG: azc:AZC_1361 two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003593160.1 KEGG: azc:AZC_2282 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver YP_003593161.1 PFAM: Tetracycline transcriptional regulator YcdC domain protein; regulatory protein TetR; KEGG: ccs:CCNA_02884 transcriptional regulator, TetR family YP_003593162.1 KEGG: ccs:CCNA_02885 isochorismatase family protein; TIGRFAM: pyrimidine utilization protein B; PFAM: isochorismatase hydrolase YP_003593163.1 KEGG: ccs:CCNA_02886 translation initiation inhibitor; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP YP_003593164.1 KEGG: ccs:CCNA_02887 hydrolase/acyltransferase family protein; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold YP_003593165.1 KEGG: ccs:CCNA_02888 nitrilotriacetate monooxygenase; TIGRFAM: pyrimidine utilization protein A; PFAM: Luciferase-like, subgroup YP_003593166.1 PFAM: adenosine/AMP deaminase; KEGG: cak:Caul_4066 adenosine/AMP deaminase YP_003593167.1 PFAM: TonB-dependent receptor plug; KEGG: sal:Sala_2744 outer membrane protein with a TonB box YP_003593168.1 PFAM: purine nucleoside permease; KEGG: zmo:ZMO0970 purine nucleoside permease YP_003593169.1 PFAM: cyclic-AMP phosphodiesterase class-II; KEGG: spe:Spro_1253 cyclic-AMP phosphodiesterase YP_003593170.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: vap:Vapar_5490 (2Fe-2S)-binding domain protein YP_003593171.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: vap:Vapar_5489 molybdopterin dehydrogenase FAD-binding YP_003593172.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: vap:Vapar_5488 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_003593173.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: cak:Caul_5086 OsmC family protein; PFAM: OsmC family protein YP_003593174.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ret:RHE_PE00173 pyridoxine 5'-phosphate oxidase protein YP_003593175.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_4004 gluconate 5-dehydrogenase YP_003593176.1 PFAM: Capsule synthesis protein, CapA; KEGG: ccs:CCNA_01697 poly-gamma-glutamate capsule biosynthesis protein YP_003593177.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01695 TonB-dependent outer membrane receptor YP_003593178.1 KEGG: ccs:CCNA_01694 7 beta-(4-carboxybutanamido)cephalosporanic acid acylase; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein YP_003593179.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ccs:CCNA_01693 transcriptional regulator, LysR family YP_003593180.1 KEGG: cak:Caul_0621 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003593181.1 KEGG: cak:Caul_0622 histidine kinase; PFAM: Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003593182.1 PFAM: alpha/beta hydrolase fold; KEGG: cak:Caul_0299 alpha/beta hydrolase fold YP_003593183.1 PFAM: isochorismatase hydrolase; KEGG: xau:Xaut_1277 isochorismatase hydrolase YP_003593184.1 KEGG: smd:Smed_3973 hypothetical protein; TIGRFAM: XapX domain protein; PFAM: protein of unknown function DUF1427 YP_003593185.1 PFAM: amidohydrolase; KEGG: reu:Reut_B4849 hypothetical protein YP_003593186.1 PFAM: DoxX family protein; KEGG: azc:AZC_3608 hypothetical protein YP_003593187.1 PFAM: protein of unknown function DUF1275; KEGG: rso:RSc0238 permease transmembrane protein YP_003593188.1 KEGG: gsu:GSU0801 hypothetical protein YP_003593189.1 KEGG: cak:Caul_4605 hypothetical protein YP_003593190.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: ccs:CCNA_01706 dehydrogluconate dehydrogenase YP_003593191.1 PFAM: protein of unknown function DUF1080; KEGG: cak:Caul_4607 hypothetical protein YP_003593192.1 PFAM: cytochrome C class I; KEGG: cak:Caul_4608 cytochrome C class I YP_003593193.1 PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: cak:Caul_4609 xylose isomerase domain-containing protein YP_003593194.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ccs:CCNA_01702 NAD-dependent oxidoreductase YP_003593195.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cak:Caul_4611 xylose isomerase domain-containing protein YP_003593196.1 PFAM: nucleoside:H symporter; KEGG: ccs:CCNA_01700 nucleoside permease YP_003593197.1 KEGG: ccs:CCNA_01699 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003593198.1 PFAM: protein of unknown function DUF1080; KEGG: cak:Caul_4614 hypothetical protein YP_003593199.1 KEGG: cak:Caul_2977 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003593200.1 PFAM: protein of unknown function DUF214; KEGG: cak:Caul_2978 hypothetical protein YP_003593201.1 KEGG: cak:Caul_2979 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593202.1 KEGG: ccs:CCNA_01896 hypothetical protein YP_003593203.1 KEGG: ccs:CCNA_01897 metal-dependent hydrolase YP_003593204.1 KEGG: ccs:CCNA_01898 DNase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_003593205.1 KEGG: ccs:CCNA_01899 DNA polymerase III, delta' subunit; TIGRFAM: DNA polymerase III, delta prime subunit YP_003593206.1 TIGRFAM: thymidylate kinase; KEGG: ccs:CCNA_01900 thymidylate kinase; PFAM: thymidylate kinase YP_003593207.1 KEGG: ccs:CCNA_01901 lipoprotein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein YP_003593208.1 PFAM: methyltransferase small; KEGG: ccs:CCNA_01914 16S rRNA m(2)G 1207 methyltransferase YP_003593209.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ccs:CCNA_01915 ribosomal small subunit pseudouridine synthase A YP_003593210.1 PFAM: SirA family protein; KEGG: ccr:CC_1839 hypothetical protein YP_003593211.1 PFAM: ribonuclease BN; KEGG: ccs:CCNA_01916 ribonuclease BN YP_003593212.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ccs:CCNA_01917 alpha-methylacyl-CoA racemase YP_003593213.1 KEGG: ccs:CCNA_01918 two-component response regulator; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003593214.1 PFAM: DSBA oxidoreductase; KEGG: ccs:CCNA_01919 FrnE protein YP_003593215.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: ccs:CCNA_01920 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_003593216.1 PFAM: protein of unknown function DUF339; KEGG: ccr:CC_1845 hypothetical protein YP_003593217.1 KEGG: ccs:CCNA_01923 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003593218.1 SMART: HTTM domain protein; KEGG: ccs:CCNA_03457 hypothetical protein YP_003593219.1 KEGG: ccs:CCNA_03458 hypothetical protein YP_003593220.1 KEGG: cak:Caul_3059 hypothetical protein YP_003593221.1 KEGG: ccs:CCNA_01924 capsular polysaccharide biosynthesis protein YP_003593222.1 PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_01925 coniferyl aldehyde dehydrogenase YP_003593223.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ccs:CCNA_01926 two-component response regulator; SMART: GGDEF domain containing protein YP_003593224.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_01927 enoyl-CoA hydratase YP_003593225.1 KEGG: ccs:CCNA_01929 hypothetical protein YP_003593226.1 PFAM: glycosyl transferase family 9; KEGG: ccs:CCNA_01930 ADP-heptose LPS heptosyltransferase YP_003593227.1 KEGG: ccs:CCNA_01933 hypothetical protein YP_003593228.1 KEGG: ccs:CCNA_01934 HesB protein family; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003593229.1 KEGG: ccs:CCNA_01935 cytosolic protein; TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59 YP_003593230.1 KEGG: ccs:CCNA_01936 cysteine desulfurase/selenocysteine lyase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_003593231.1 PFAM: SufBD protein; KEGG: ccs:CCNA_01937 SufD protein YP_003593232.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: ccs:CCNA_01938 ATP-dependent transporter SufC; SMART: AAA ATPase YP_003593233.1 KEGG: ccs:CCNA_01940 ABC transporter-associated protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_003593234.1 KEGG: ccs:CCNA_01941 cysteine desulfhydrase/selenocysteine lyase; PFAM: aminotransferase class V YP_003593235.1 KEGG: ccs:CCNA_01942 Rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003593236.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_01943 alpha/beta hydrolase YP_003593237.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cak:Caul_2583 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003593238.1 KEGG: cak:Caul_5242 hypothetical protein YP_003593239.1 PFAM: protein of unknown function UPF0075; KEGG: cak:Caul_2582 anhydro-N-acetylmuramic acid kinase YP_003593240.1 TIGRFAM: tyrosyl-tRNA synthetase; KEGG: ccs:CCNA_01946 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_003593241.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ccs:CCNA_01947 thioredoxin peroxidase YP_003593242.1 PFAM: Peptidase M23; KEGG: ccs:CCNA_01948 peptidoglycan-specific endopeptidase, M23 family YP_003593243.1 PFAM: protein of unknown function DUF583; KEGG: ccs:CCNA_01949 cytosolic protein YP_003593244.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cak:Caul_2577 glyoxalase/bleomycin resistance protein/dioxygenase YP_003593245.1 KEGG: cak:Caul_2576 hypothetical protein YP_003593246.1 manually curated; KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_003593247.1 KEGG: ccs:CCNA_01951 multimodular transpeptidase-transglycosylase PBP 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003593248.1 PFAM: cell wall hydrolase/autolysin; KEGG: ccs:CCNA_01952 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin YP_003593249.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: ccs:CCNA_01954 ribonuclease E; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_003593250.1 PFAM: peptidase M48 Ste24p; KEGG: ccs:CCNA_01955 zinc metalloprotease YP_003593251.1 PFAM: DSBA oxidoreductase; KEGG: ccs:CCNA_01956 outer membrane protein YP_003593252.1 PFAM: thiazole biosynthesis protein; KEGG: ccs:CCNA_01957 thiazole biosynthesis protein ThiG YP_003593253.1 KEGG: ccs:CCNA_01958 ThiS protein; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_003593254.1 KEGG: ccs:CCNA_01959 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_003593255.1 KEGG: ccs:CCNA_01960 biotin carboxyl carrier protein of acetyl-CoA; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_003593256.1 KEGG: ccs:CCNA_01961 biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_003593257.1 PFAM: Protein of unknown function DUF2155; KEGG: ccr:CC_1886 hypothetical protein YP_003593258.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: ccs:CCNA_01964 NADH dehydrogenase YP_003593259.1 KEGG: ccs:CCNA_01966 vitamin B12-dependent ribonucleotide reductase YP_003593260.1 PFAM: pentapeptide repeat protein; KEGG: ccs:CCNA_01968 hypothetical protein YP_003593261.1 KEGG: ccs:CCNA_01969 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_003593262.1 KEGG: ccs:CCNA_01970 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase YP_003593263.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ccs:CCNA_01971 peptidyl-prolyl cis-trans isomerase YP_003593264.1 TIGRFAM: anthranilate synthase component I; KEGG: ccs:CCNA_01972 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003593265.1 KEGG: ccs:CCNA_01973 hypothetical protein YP_003593266.1 KEGG: ccs:CCNA_01974 anthranilate synthase component II/para-aminobenzoate synthase glutamine amidotransferase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_003593267.1 KEGG: ccs:CCNA_01975 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_003593268.1 KEGG: ccs:CCNA_01976 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_003593269.1 PFAM: Methyltransferase type 11; KEGG: ccs:CCNA_01978 methyltransferase YP_003593270.1 TIGRFAM: LexA repressor; KEGG: ccs:CCNA_01979 LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; LexA DNA-binding domain protein YP_003593271.1 KEGG: ccs:CCNA_01980 methylisocitrate lyase YP_003593272.1 KEGG: ccs:CCNA_01981 DNA translocation competence protein ComA; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_003593273.1 KEGG: ccs:CCNA_01982 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003593274.1 TIGRFAM: citrate synthase I; KEGG: ccs:CCNA_01983 citrate synthase; PFAM: Citrate synthase YP_003593275.1 PFAM: type III secretion exporter; KEGG: ccs:CCNA_01984 FlhB-like flagellar protein YP_003593276.1 KEGG: ccs:CCNA_01985 ABC transporter ATP-binding protein YP_003593277.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: ccs:CCNA_01986 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_003593278.1 PFAM: protein of unknown function DUF1009; KEGG: ccs:CCNA_01987 hypothetical protein YP_003593279.1 KEGG: ccs:CCNA_01988 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_003593280.1 KEGG: ccs:CCNA_01989 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003593281.1 KEGG: ccs:CCNA_01990 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_003593282.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: ccs:CCNA_01991 hypothetical protein YP_003593283.1 KEGG: ccs:CCNA_01992 outer membrane protein assembly factor; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein YP_003593284.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: ccs:CCNA_01993 membrane endopeptidase MmpA; SMART: PDZ/DHR/GLGF domain protein YP_003593285.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: ccs:CCNA_01994 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003593286.1 PFAM: phosphatidate cytidylyltransferase; KEGG: ccs:CCNA_01995 phosphatidate cytidylyltransferase YP_003593287.1 TIGRFAM: UDP diphosphate synthase; KEGG: ccs:CCNA_01996 UDP pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003593288.1 KEGG: ccs:CCNA_01997 ribosome recycling factor (RRF); TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_003593289.1 KEGG: ccs:CCNA_01999 protein translation elongation factor Ts (EF-Ts); TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_003593290.1 KEGG: ccs:CCNA_02000 SSU ribosomal protein S2P; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_003593291.1 KEGG: ccs:CCNA_02001 phosphoserine phosphatase YP_003593292.1 KEGG: ccs:CCNA_02002 methyltransferase; manually curated; PFAM: Methyltransferase type 11 YP_003593293.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: cak:Caul_2807 glutathione-dependent formaldehyde-activating GFA YP_003593294.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: ccs:CCNA_02003 DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_003593295.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ccs:CCNA_02005 inosine-uridine preferring nucleoside hydrolase YP_003593296.1 KEGG: ccs:CCNA_02006 lipoprotein releasing system ATP-binding protein LolD; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593297.1 KEGG: ccs:CCNA_02007 lipoprotein releasing system transmembrane protein LolE; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_003593298.1 TIGRFAM: prolyl-tRNA synthetase; KEGG: ccs:CCNA_02008 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003593299.1 PFAM: protein of unknown function DUF1467; KEGG: ccs:CCNA_02010 hypothetical protein YP_003593300.1 TIGRFAM: methylmalonyl-CoA epimerase; KEGG: ccs:CCNA_02011 methylmalonyl CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003593301.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: ccs:CCNA_02012 metal-dependent hydrolase YP_003593302.1 KEGG: ccs:CCNA_02013 pantothenate kinase/Bvg accessory factor; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_003593303.1 KEGG: cak:Caul_2818 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_003593304.1 KEGG: ccs:CCNA_02015 NADH-quinone oxidoreductase chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003593305.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; KEGG: ccs:CCNA_02016 NADH-quinone oxidoreductase chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003593306.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: ccs:CCNA_02017 NADH-quinone oxidoreductase chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003593307.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ccs:CCNA_02018 NADH-quinone oxidoreductase chain K YP_003593308.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ccs:CCNA_02019 NADH-quinone oxidoreductase chain J YP_003593309.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: ccs:CCNA_02020 NADH-quinone oxidoreductase chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003593310.1 KEGG: ccr:CC_1943 hypothetical protein YP_003593311.1 KEGG: ccs:CCNA_02021 hypothetical protein YP_003593312.1 KEGG: ccs:CCNA_02022 NADH-quinone oxidoreductase chain H; PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_003593313.1 KEGG: ccs:CCNA_02023 NADH-quinone oxidoreductase chain G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; NADH-quinone oxidoreductase chain G YP_003593314.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: ccs:CCNA_02024 NADH-quinone oxidoreductase chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_003593315.1 KEGG: ccs:CCNA_02025 hypothetical protein YP_003593316.1 KEGG: ccs:CCNA_02026 hypothetical protein YP_003593317.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: cak:Caul_2831 NADH dehydrogenase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_003593318.1 PFAM: protein of unknown function DUF1486; KEGG: cak:Caul_2832 hypothetical protein YP_003593319.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: ccs:CCNA_02029 NADH-quinone oxidoreductase chain D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_003593320.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; KEGG: cak:Caul_2834 NADH dehydrogenase subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_003593321.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: ccs:CCNA_02032 NADH-quinone oxidoreductase chain B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003593322.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: ccs:CCNA_02033 NADH-quinone oxidoreductase chain A YP_003593323.1 manually curated; TIGRFAM: luciferase family oxidoreductase, group 1; KEGG: ccs:CCNA_02034 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup YP_003593324.1 KEGG: ccs:CCNA_02035 glycosyltransferase; manually curated; PFAM: glycosyl transferase group 1 YP_003593325.1 manually curated; KEGG: cak:Caul_2840 hypothetical protein YP_003593326.1 KEGG: cak:Caul_2841 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_003593327.1 KEGG: ccs:CCNA_02036 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003593328.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: ccs:CCNA_02037 ATP-dependent endopeptidase Lon; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_003593329.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; KEGG: ccs:CCNA_02039 ATP-dependent endopeptidase clp, ATP-binding subunit ClpX; SMART: AAA ATPase YP_003593330.1 KEGG: ccs:CCNA_02040 phosphoserine phosphatase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_003593331.1 KEGG: ccs:CCNA_02041 ATP-dependent endopeptidase clp, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003593332.1 KEGG: ccs:CCNA_02042 trigger factor, ppiase; TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type YP_003593333.1 KEGG: ccs:CCNA_02043 sugar kinase; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031 YP_003593334.1 PFAM: phosphoglycerate mutase; KEGG: ccs:CCNA_02044 phosphoglycerate mutase YP_003593335.1 KEGG: ccs:CCNA_02045 acetyl-coenzyme A synthetase YP_003593336.1 PFAM: nitrogen regulatory protein P-II; KEGG: ccs:CCNA_02046 nitrogen regulatory protein P-II YP_003593337.1 KEGG: ccs:CCNA_02047 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003593338.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_02048 TonB-dependent receptor YP_003593339.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ccs:CCNA_02049 ABM superfamily monooxygenase protein YP_003593340.1 PFAM: amidohydrolase; KEGG: ccr:CC_1972 hypothetical protein YP_003593341.1 PFAM: amidohydrolase; KEGG: ccs:CCNA_02051 dihydroorotase YP_003593342.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: ccs:CCNA_02052 topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein YP_003593343.1 KEGG: ccs:CCNA_01786 hypothetical protein YP_003593344.1 KEGG: ach:Achl_1114 hypothetical protein YP_003593345.1 KEGG: ccs:CCNA_01783 DnaA-related protein; PFAM: Chromosomal replication initiator DnaA; SMART: AAA ATPase YP_003593346.1 KEGG: ccr:CC_1710 polyphosphate kinase; PFAM: Polyphosphate kinase YP_003593347.1 PFAM: aminoglycoside phosphotransferase; KEGG: sus:Acid_4768 aminoglycoside phosphotransferase YP_003593348.1 PFAM: Ppx/GppA phosphatase; KEGG: ccs:CCNA_01780 exopolyphosphatase YP_003593349.1 KEGG: ccs:CCNA_01779 hypothetical protein YP_003593350.1 KEGG: ccs:CCNA_01777 hybrid sensor histidine kinase/receiver domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003593351.1 SMART: 3'-5' exonuclease; HRDC domain protein; TIGRFAM: ribonuclease D; KEGG: ccs:CCNA_01776 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein YP_003593352.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: ccs:CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003593353.1 KEGG: ccs:CCNA_01774 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_003593354.1 KEGG: cak:Caul_0934 PRC-barrel domain-containing protein; manually curated; PFAM: PRC-barrel domain protein YP_003593355.1 PFAM: SNARE associated Golgi protein; KEGG: ccs:CCNA_01773 SNARE-associated family membrane protein YP_003593356.1 PFAM: protein of unknown function DUF1275; KEGG: cak:Caul_2541 hypothetical protein YP_003593357.1 PFAM: nucleoside diphosphate kinase; KEGG: ccs:CCNA_01770 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003593358.1 KEGG: ccs:CCNA_01769 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593359.1 KEGG: ccs:CCNA_01768 hypothetical protein YP_003593360.1 PFAM: cytochrome C class I; KEGG: mca:MCA2395 cytochrome C YP_003593361.1 PFAM: cytochrome C oxidase subunit I; KEGG: bpd:BURPS668_1353 cytochrome C oxidase, subunit I YP_003593362.1 PFAM: cytochrome C oxidase subunit II; KEGG: bmj:BMULJ_05759 cytochrome C oxidase subunit II YP_003593363.1 KEGG: mno:Mnod_8115 hypothetical protein YP_003593364.1 KEGG: hypothetical protein YP_003593365.1 PFAM: cytochrome C class I; KEGG: ccs:CCNA_01767 cytochrome C YP_003593366.1 KEGG: ccs:CCNA_01765 hypothetical protein YP_003593367.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: ccs:CCNA_01764 DNA polymerase III, chi subunit YP_003593368.1 KEGG: ccs:CCNA_01763 cytosol aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_003593369.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ccs:CCNA_01762 hypothetical protein YP_003593370.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ccs:CCNA_01761 hypothetical protein YP_003593371.1 PFAM: Organic solvent tolerance protein; KEGG: ccs:CCNA_01760 organic solvent tolerance protein YP_003593372.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: ccs:CCNA_01759 peptidyl-prolyl cis-trans isomerase YP_003593373.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: ccs:CCNA_01758 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_003593374.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: ccs:CCNA_01757 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_003593375.1 PFAM: HWE histidine kinase; histidine kinase HAMP region domain protein; KEGG: ccs:CCNA_01755 two component sensor histidine kinase YP_003593376.1 KEGG: cak:Caul_1424 hypothetical protein YP_003593377.1 PFAM: Transglycosylase-associated protein; KEGG: ccs:CCNA_01754 transglycosylase associated protein YP_003593378.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: ccs:CCNA_01753 guanylate kinase; PFAM: guanylate kinase YP_003593379.1 PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: ccs:CCNA_01752 protein YicC YP_003593380.1 PFAM: aminodeoxychorismate lyase; KEGG: ccs:CCNA_01751 hypothetical protein YP_003593381.1 KEGG: ccs:CCNA_01750 3-oxoacyl-(acyl-carrier-protein) synthase; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_003593382.1 KEGG: ccs:CCNA_01749 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_003593383.1 KEGG: ccs:CCNA_01747 3-oxoacyl-(acyl-carrier protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003593384.1 KEGG: ccs:CCNA_01746 malonyl-CoA-(acyl-carrier-protein) transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_003593385.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ccs:CCNA_01745 thioredoxin peroxidase YP_003593386.1 PFAM: fatty acid hydroxylase; KEGG: ccs:CCNA_01743 sterol desaturase family protein YP_003593387.1 KEGG: ccs:CCNA_01742 hypothetical protein YP_003593388.1 KEGG: ccs:CCNA_01741 SSU ribosomal protein S6P; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_003593389.1 KEGG: cak:Caul_2511 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_003593390.1 KEGG: ccs:CCNA_01739 LSU ribosomal protein L9P; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_003593391.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2509 TonB-dependent receptor YP_003593392.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: ccs:CCNA_01737 replicative DNA helicase; SMART: AAA ATPase YP_003593393.1 TIGRFAM: alanine racemase; KEGG: ccs:CCNA_01733 alanine racemase; PFAM: alanine racemase domain protein YP_003593394.1 KEGG: ccs:CCNA_01732 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_003593395.1 PFAM: Colicin V production protein; KEGG: ccs:CCNA_01731 colicin V production protein YP_003593396.1 KEGG: ccs:CCNA_01730 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_003593397.1 PFAM: Bile acid:sodium symporter; KEGG: ccs:CCNA_01729 transporter, sodium/bile acid symporter family YP_003593398.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_01728 short chain dehydrogenase YP_003593399.1 KEGG: cak:Caul_0350 hypothetical protein YP_003593400.1 KEGG: ccs:CCNA_01726 GTP-binding protein; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003593401.1 KEGG: ccs:CCNA_01725 PQQ enzyme repeat family protein YP_003593402.1 PFAM: Protein of unknown function DUF2133; Tetratricopeptide TPR_2 repeat protein; KEGG: ccs:CCNA_01724 hypothetical protein YP_003593403.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: ccs:CCNA_01723 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003593404.1 KEGG: ccs:CCNA_01722 hypothetical protein YP_003593405.1 KEGG: ccs:CCNA_01721 RNA polymerase sigma-E factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_003593406.1 KEGG: cak:Caul_2493 hypothetical protein YP_003593407.1 KEGG: ccs:CCNA_01719 hypothetical protein YP_003593408.1 KEGG: ccs:CCNA_01718 extracytoplasmic function alternative sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003593409.1 KEGG: cak:Caul_2490 hypothetical protein YP_003593410.1 KEGG: ccs:CCNA_01716 hypothetical protein YP_003593411.1 KEGG: ccr:CC_1643 HAD superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003593412.1 PFAM: arsenate reductase and related; KEGG: ccs:CCNA_01714 arsenate reductase YP_003593413.1 PFAM: phosphoesterase HXTX; KEGG: ccs:CCNA_01713 2'-5' RNA ligase YP_003593414.1 PFAM: Protein of unknown function DUF2147; KEGG: ccs:CCNA_01708 hypothetical protein YP_003593415.1 KEGG: ccs:CCNA_01353 3-phytase/6-phytase; PFAM: phytase YP_003593416.1 KEGG: ccs:CCNA_02474 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003593417.1 KEGG: ccs:CCNA_02475 transcriptional regulator VanR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003593418.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ccs:CCNA_02476 vanillate demethylase oxygenase subunit A VanA YP_003593419.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ccs:CCNA_02477 vanillate demethylase oxidoreductase subunit VanB YP_003593420.1 KEGG: dge:Dgeo_1926 dienelactone hydrolase-like protein YP_003593421.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_02483 4-coumarate--CoA ligase YP_003593422.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_02484 trans-feruloyl-CoA hydratase YP_003593423.1 PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_02485 vanillin dehydrogenase YP_003593424.1 KEGG: ccs:CCNA_02486 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003593425.1 TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; KEGG: cak:Caul_3846 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding YP_003593426.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: ccs:CCNA_02488 acetate/3-ketoacid CoA transferase, subunit A; PFAM: coenzyme A transferase YP_003593427.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: ccs:CCNA_02489 acetate/3-ketoacid CoA transferase, subunit B; PFAM: coenzyme A transferase YP_003593428.1 KEGG: ccs:CCNA_02491 protocatechuate 3,4-dioxygenase subunit beta; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase YP_003593429.1 TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; KEGG: cak:Caul_3851 protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase YP_003593430.1 KEGG: ccs:CCNA_02493 3-carboxy-cis,cis-muconate cycloisomerase; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase YP_003593431.1 KEGG: ccs:CCNA_02494 3-oxoadipate enol-lactonase/4-carboxymuconolactone decarboxylase; TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: Carboxymuconolactone decarboxylase; alpha/beta hydrolase fold YP_003593432.1 KEGG: sus:Acid_0259 hypothetical protein YP_003593433.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dsy:DSY2315 hypothetical protein YP_003593434.1 KEGG: swi:Swit_1970 L-carnitine dehydratase/bile acid-inducible protein F YP_003593435.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: tcu:Tcur_0440 L-carnitine dehydratase/bile acid-inducible protein F YP_003593436.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_5189 TonB-dependent receptor YP_003593437.1 KEGG: slo:Shew_2869 peptidase S15; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase domain protein; peptidase S15 YP_003593438.1 PFAM: Capsule synthesis protein, CapA; KEGG: stp:Strop_1584 hypothetical protein YP_003593439.1 KEGG: eba:ebA5386 transcriptional regulator MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003593440.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_02570 transporter YP_003593441.1 KEGG: cak:Caul_1134 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003593442.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_02495 4-hydroxybenzoate transporter YP_003593443.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_1136 TonB-dependent receptor YP_003593444.1 KEGG: cak:Caul_4010 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003593445.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_4011 short-chain dehydrogenase/reductase SDR YP_003593446.1 PFAM: regulatory protein TetR; KEGG: pzu:PHZ_c0672 transcriptional regulator, TetR family YP_003593447.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cak:Caul_4012 AMP-dependent synthetase and ligase YP_003593448.1 KEGG: cak:Caul_4013 carboxylesterase type B; PFAM: Carboxylesterase type B YP_003593449.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2711 TonB-dependent receptor YP_003593450.1 PFAM: major facilitator superfamily MFS_1; KEGG: cak:Caul_4014 major facilitator transporter YP_003593451.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_4015 TetR family transcriptional regulator YP_003593452.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_4016 TonB-dependent receptor YP_003593453.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: avi:Avi_2791 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003593454.1 KEGG: cak:Caul_0637 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_003593455.1 KEGG: cak:Caul_0310 hypothetical protein YP_003593456.1 KEGG: cak:Caul_0309 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003593457.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_0308 TonB-dependent receptor YP_003593458.1 PFAM: PfkB domain protein; KEGG: cak:Caul_0306 ribokinase-like domain-containing protein YP_003593459.1 KEGG: cak:Caul_0305 hypothetical protein YP_003593460.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: cak:Caul_0304 inosine/uridine-preferring nucleoside hydrolase YP_003593461.1 KEGG: ccs:CCNA_02805 hypothetical protein YP_003593462.1 PFAM: outer membrane efflux protein; KEGG: cak:Caul_2284 outer membrane efflux protein YP_003593463.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pzu:PHZ_c1432 secretion protein HlyD YP_003593464.1 KEGG: pzu:PHZ_c1433 cation efflux system membrane protein A; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_003593465.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ilo:IL0109 outer membrane protein YP_003593466.1 KEGG: cak:Caul_1473 hypothetical protein YP_003593467.1 PFAM: PepSY-associated TM helix domain protein; KEGG: cak:Caul_1472 PepSY-associated TM helix domain-containing protein YP_003593468.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_1297 short chain dehydrogenase YP_003593469.1 KEGG: azc:AZC_1296 hypothetical protein YP_003593470.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mll2533 transcriptional regulator YP_003593471.1 KEGG: azc:AZC_4550 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_003593472.1 KEGG: cak:Caul_1786 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter YP_003593473.1 KEGG: cak:Caul_1787 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003593474.1 SMART: regulatory protein ArsR; KEGG: cak:Caul_1788 ArsR family transcriptional regulator YP_003593475.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rle:RL1198 hypothetical protein YP_003593476.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: rle:RL1199 hypothetical protein YP_003593477.1 PFAM: aldo/keto reductase; KEGG: ara:Arad_9839 D-threo-aldose 1-dehydrogenase protein YP_003593478.1 KEGG: mlo:mll2018 hypothetical protein YP_003593479.1 KEGG: mrd:Mrad2831_6035 carotenoid oxygenase; PFAM: Carotenoid oxygenase YP_003593480.1 KEGG: kse:Ksed_01400 uncharacterized conserved protein (DUF2332) YP_003593481.1 PFAM: major facilitator superfamily MFS_1; KEGG: psa:PST_0102 MFS family transporter YP_003593482.1 PFAM: transcriptional regulator domain protein; KEGG: rle:RL1201 transcriptional regulator YP_003593483.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: swi:Swit_2301 TonB-dependent receptor YP_003593484.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1470 short chain dehydrogenase YP_003593485.1 PFAM: protein of unknown function DUF336; KEGG: ret:RHE_CH02038 hypothetical protein YP_003593486.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_3512 short-chain dehydrogenase/reductase SDR YP_003593487.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ara:Arad_9844 MGC89112 protein YP_003593488.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rle:RL1815 LysR family transcriptional regulator YP_003593489.1 KEGG: mlo:mll2018 hypothetical protein YP_003593490.1 KEGG: rle:pRL120448 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003593492.1 KEGG: cak:Caul_4130 hypothetical protein YP_003593493.1 KEGG: cak:Caul_4129 hypothetical protein YP_003593494.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: mes:Meso_3683 alcohol dehydrogenase GroES-like protein YP_003593495.1 PFAM: cyclase/dehydrase; KEGG: mes:Meso_3684 cyclase/dehydrase YP_003593496.1 KEGG: cak:Caul_1862 TonB-dependent receptor plug; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003593497.1 KEGG: cak:Caul_1861 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003593498.1 PFAM: FecR protein; KEGG: cak:Caul_1860 anti-FecI sigma factor, FecR YP_003593499.1 KEGG: cak:Caul_1859 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003593500.1 KEGG: cak:Caul_1858 hypothetical protein YP_003593501.1 KEGG: rle:RL0308 transcriptional regulator; PFAM: transcriptional regulator domain protein; NB-ARC domain protein; SMART: AAA ATPase YP_003593502.1 PFAM: ThiJ/PfpI domain protein; KEGG: azc:AZC_2782 type 1 glutamine amidotransferase YP_003593503.1 KEGG: mlo:mll2018 hypothetical protein YP_003593504.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rle:RL0312 hypothetical protein YP_003593505.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI_2727 hypothetical protein YP_003593506.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rle:pRL120544 LysR family transcriptional regulator YP_003593507.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbt:BBta_5514 dihydrokaempferol 4-reductase (NAD-dependent epimerase/dehydratase) YP_003593508.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_2192 short chain dehydrogenase/reductase family oxidoreductase YP_003593509.1 KEGG: hne:HNE_2199 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003593510.1 KEGG: hne:HNE_2223 major facilitator family transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_003593511.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_2205 short chain dehydrogenase/reductase family oxidoreductase YP_003593512.1 PFAM: MltA-interacting MipA family protein; KEGG: hne:HNE_2224 MipA family protein YP_003593513.1 KEGG: tau:Tola_3107 carboxylesterase; PFAM: Carboxylesterase type B YP_003593514.1 PFAM: glycosyl hydrolase family 3 domain protein; KEGG: cak:Caul_3288 beta-glucosidase YP_003593515.1 PFAM: glycosyl hydrolase family 3 domain protein; KEGG: avi:Avi_0107 beta-glucosidase protein YP_003593516.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1901 TonB-dependent receptor YP_003593517.1 KEGG: ccs:CCNA_02132 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003593518.1 PFAM: MltA-interacting MipA family protein; KEGG: ccs:CCNA_00356 outer membrane protein YP_003593519.1 KEGG: mag:amb3243 response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003593520.1 KEGG: nha:Nham_3295 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003593521.1 PFAM: toluene tolerance family protein; KEGG: ccs:CCNA_03807 organic solvent resistance transport system Ttg2D protein YP_003593522.1 PFAM: VacJ family lipoprotein; KEGG: ccs:CCNA_03806 outer membrane lipoprotein YP_003593523.1 KEGG: cak:Caul_0852 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003593524.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rlt:Rleg2_5171 NAD-dependent epimerase/dehydratase YP_003593525.1 manually curated; PFAM: regulatory protein MarR; KEGG: cak:Caul_5077 MarR family transcriptional regulator; SMART: regulatory protein MarR YP_003593526.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ccs:CCNA_00905 hypothetical protein YP_003593527.1 KEGG: cak:Caul_0971 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003593528.1 KEGG: xca:xccb100_3595 TonB-dependent outer membrane receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003593529.1 KEGG: xca:xccb100_3594 phosphoanhydride phosphohydrolase / 4-phytase multifunctional enzyme, probable; PFAM: histidine acid phosphatase YP_003593530.1 KEGG: ccs:CCNA_01828 hypothetical protein YP_003593531.1 PFAM: OsmC family protein; KEGG: bbt:BBta_3653 hypothetical protein YP_003593532.1 KEGG: ccs:CCNA_01571 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_003593533.1 KEGG: cak:Caul_1786 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter YP_003593534.1 KEGG: cak:Caul_1787 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003593535.1 SMART: regulatory protein ArsR; KEGG: cak:Caul_1788 ArsR family transcriptional regulator YP_003593536.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpe:BP1682 hypothetical protein YP_003593537.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pzu:PHZ_c1441 phosphinothricin N-acetyltransferase YP_003593538.1 KEGG: pzu:PHZ_c1440 arsenical resistance protein ArsH; TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase YP_003593539.1 KEGG: rde:RD1_3487 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003593540.1 KEGG: cak:Caul_4149 hypothetical protein YP_003593541.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: hne:HNE_0181 cysteine synthase/cystathionine beta-synthase family protein YP_003593542.1 KEGG: cak:Caul_2648 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003593543.1 KEGG: pzu:PHZ_c1458 ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593544.1 KEGG: ppu:PP_1299 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003593545.1 KEGG: rru:Rru_A1003 amino acid ABC transporter permease; TIGRFAM: conserved hypothetical protein; PFAM: binding-protein-dependent transport systems inner membrane component YP_003593546.1 KEGG: sil:SPO0519 glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003593547.1 PFAM: amidohydrolase; KEGG: pzu:PHZ_c1859 imidazolonepropionase YP_003593548.1 PFAM: amidohydrolase; KEGG: ccr:CC_1972 hypothetical protein YP_003593549.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c0623 TonB-dependent receptor YP_003593550.1 PFAM: amidohydrolase; KEGG: pzu:PHZ_c0622 amidohydrolase YP_003593551.1 KEGG: cak:Caul_0270 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_003593552.1 KEGG: rop:ROP_35510 lysyl-tRNA synthetase YP_003593553.1 PFAM: Antirestriction ArdA family protein; KEGG: mmr:Mmar10_2344 antirestriction ArdA family protein YP_003593554.1 KEGG: gdj:Gdia_2762 hypothetical protein YP_003593555.1 KEGG: fre:Franean1_2942 acyl-CoA dehydrogenase domain-containing protein YP_003593556.1 KEGG: vap:Vapar_3094 UDP-2,3-diacylglucosamine hydrolase YP_003593557.1 PFAM: protein of unknown function DUF159; KEGG: hypothetical protein YP_003593558.1 KEGG: ccs:CCNA_00662 hypothetical protein YP_003593559.1 KEGG: hypothetical protein YP_003593560.1 KEGG: sen:SACE_4376 LuxR family transcriptional regulator YP_003593561.1 KEGG: cak:Caul_2223 hypothetical protein YP_003593562.1 KEGG: cak:Caul_2224 hypothetical protein YP_003593563.1 manually curated; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: cak:Caul_5175 exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_003593564.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: hoh:Hoch_2313 endonuclease/exonuclease/phosphatase YP_003593565.1 KEGG: cak:Caul_2023 hypothetical protein YP_003593566.1 PFAM: Protein of unknown function DUF2274; KEGG: cak:Caul_2277 hypothetical protein YP_003593567.1 PFAM: conjugation TrbI family protein; KEGG: cak:Caul_2276 conjugation TrbI family protein YP_003593568.1 KEGG: sal:Sala_2478 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX YP_003593569.1 PFAM: Conjugal transfer protein; KEGG: cak:Caul_2274 conjugal transfer protein TrbF YP_003593570.1 KEGG: cak:Caul_2273 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein YP_003593571.1 KEGG: xau:Xaut_2999 hypothetical protein YP_003593572.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: cak:Caul_2272 conjugal transfer protein TrbJ YP_003593573.1 KEGG: cak:Caul_2271 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase YP_003593574.1 KEGG: cak:Caul_2270 conjugal transfer protein TrbD YP_003593575.1 PFAM: Conjugal transfer protein TrbC; KEGG: cak:Caul_2269 conjugal transfer protein TrbC YP_003593576.1 KEGG: cak:Caul_2268 P-type conjugative transfer ATPase TrbB; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E YP_003593577.1 KEGG: cak:Caul_2021 hypothetical protein YP_003593578.1 KEGG: bbt:BBta_5343 phospholipase C/P1 nuclease domain-containing protein YP_003593580.1 TIGRFAM: arsenite oxidase, large subunit; KEGG: xau:Xaut_3950 arsenite oxidase large subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_003593581.1 TIGRFAM: arsenite oxidase, small subunit; KEGG: xau:Xaut_3949 arsenite oxidase small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain YP_003593582.1 KEGG: bpl:BURPS1106A_A3099 quinone oxidoreductase YP_003593583.1 KEGG: ccs:CCNA_02805 hypothetical protein YP_003593584.1 PFAM: outer membrane efflux protein; KEGG: pzu:PHZ_p0238 metal ion efflux outer membrane factor protein family protein YP_003593585.1 KEGG: pzu:PHZ_c1432 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003593586.1 KEGG: pzu:PHZ_c1433 cation efflux system membrane protein A; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_003593587.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pzu:PHZ_c1472 copper-translocating P-type ATPase; SMART: TRASH domain protein YP_003593588.1 PFAM: copper resistance protein CopC; KEGG: pzu:PHZ_p0225 copper resistance protein C precursor YP_003593589.1 PFAM: copper resistance D domain protein; KEGG: pzu:PHZ_c1480 copper export protein YP_003593590.1 KEGG: acb:A1S_2931 hypothetical protein YP_003593591.1 PFAM: copper resistance B precursor; KEGG: pzu:PHZ_p0218 copper resistance B protein precursor YP_003593592.1 KEGG: pzu:PHZ_c1476 copper-binding protein; TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2 YP_003593593.1 KEGG: pzu:PHZ_c1475 RNA polymerase sigma-70 factor,ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003593594.1 KEGG: pzu:PHZ_c1474 hypothetical protein YP_003593595.1 KEGG: cak:Caul_2315 hypothetical protein YP_003593596.1 KEGG: cak:Caul_2328 hypothetical protein YP_003593597.1 KEGG: sro:Sros_3060 beta-N-acetylhexosaminidase YP_003593598.1 PFAM: outer membrane efflux protein; KEGG: pzu:PHZ_c1456 outer membrane efflux protein YP_003593599.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cak:Caul_2325 RND family efflux transporter MFP subunit YP_003593600.1 KEGG: pzu:PHZ_c1454 heavy metal efflux pump CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_003593601.1 KEGG: cak:Caul_4010 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003593602.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_4011 short-chain dehydrogenase/reductase SDR YP_003593603.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cak:Caul_4012 AMP-dependent synthetase and ligase YP_003593604.1 KEGG: cak:Caul_4013 carboxylesterase type B; PFAM: Carboxylesterase type B YP_003593605.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2711 TonB-dependent receptor YP_003593606.1 PFAM: major facilitator superfamily MFS_1; KEGG: cak:Caul_4014 major facilitator transporter YP_003593607.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_4015 TetR family transcriptional regulator YP_003593608.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_4016 TonB-dependent receptor YP_003593609.1 PFAM: helix-turn-helix HxlR type; KEGG: pwa:Pecwa_3206 transcriptional regulator, HxlR family YP_003593610.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: atc:AGR_C_1580 hypothetical protein YP_003593611.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_4032 LysR family transcriptional regulator YP_003593612.1 PFAM: NmrA family protein; KEGG: cak:Caul_4033 NmrA family protein YP_003593613.1 manually curated; PFAM: transcriptional regulator domain protein; NB-ARC domain protein; KEGG: rle:RL0308 transcriptional regulator; SMART: AAA ATPase YP_003593614.1 PFAM: ThiJ/PfpI domain protein; KEGG: azc:AZC_2782 type 1 glutamine amidotransferase YP_003593615.1 KEGG: mlo:mll2018 hypothetical protein YP_003593616.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rle:RL0312 hypothetical protein YP_003593617.1 KEGG: smd:Smed_2597 beta-lactamase-like protein YP_003593618.1 KEGG: kko:Kkor_1250 hypothetical protein YP_003593619.1 KEGG: ara:Arad_4112 chromosome partition protein YP_003593620.1 KEGG: nha:Nham_3829 hypothetical protein YP_003593621.1 KEGG: gdj:Gdia_1062 hypothetical protein YP_003593622.1 KEGG: bte:BTH_II0845 hypothetical protein YP_003593623.1 KEGG: cak:Caul_2257 hypothetical protein YP_003593624.1 PFAM: TRAG family protein; KEGG: pzu:PHZ_c1509 conjugal transfer coupling protein TraG YP_003593625.1 manually curated; KEGG: cak:Caul_2252 hypothetical protein YP_003593626.1 KEGG: mes:Meso_0517 lytic transglycosylase, catalytic; manually curated; PFAM: Lytic transglycosylase catalytic YP_003593627.1 PFAM: Peptidase S26, conserved region; KEGG: cak:Caul_2250 type IV secretory pathway protease TraF-like protein YP_003593628.1 KEGG: cak:Caul_2249 hypothetical protein YP_003593629.1 KEGG: xau:Xaut_2867 transcriptional regulator YP_003593630.1 PFAM: Protein of unknown function DUF2285; KEGG: cak:Caul_2247 hypothetical protein YP_003593631.1 KEGG: cak:Caul_2246 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003593632.1 manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2 YP_003593633.1 PFAM: FecR protein; KEGG: cak:Caul_2244 anti-FecI sigma factor, FecR YP_003593634.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: cak:Caul_2243 TonB-dependent receptor YP_003593635.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ccs:CCNA_02793 acylamino-acid-releasing enzyme YP_003593636.1 PFAM: asparagine synthase; KEGG: cak:Caul_1986 asparagine synthase YP_003593637.1 KEGG: cak:Caul_1985 hypothetical protein YP_003593641.1 KEGG: cak:Caul_2237 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003593642.1 KEGG: cak:Caul_2236 hypothetical protein YP_003593643.1 PFAM: protein of unknown function DUF736; KEGG: cak:Caul_2235 hypothetical protein YP_003593644.1 PFAM: protein of unknown function DUF736; KEGG: pzu:PHZ_c1488 hypothetical protein YP_003593645.1 PFAM: protein of unknown function DUF736; KEGG: nha:Nham_4484 hypothetical protein YP_003593646.1 KEGG: hau:Haur_0807 hemolysin III family channel protein YP_003593647.1 KEGG: pzu:PHZ_c1486 predicted transcriptional regulator; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003593648.1 PFAM: Prophage CP4-57 regulatory; KEGG: cak:Caul_2218 phage transcriptional regulator, AlpA YP_003593649.1 PFAM: phosphate transporter; KEGG: ote:Oter_0303 phosphate transporter YP_003593650.1 PFAM: major facilitator superfamily MFS_1; KEGG: ava:Ava_3714 major facilitator transporter YP_003593651.1 KEGG: mca:MCA1026 hypothetical protein YP_003593652.1 KEGG: aav:Aave_3121 hypothetical protein YP_003593653.1 KEGG: bid:Bind_2820 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003593654.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ana:alr1095 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003593655.1 KEGG: ppd:Ppro_2994 hypothetical protein YP_003593656.1 PFAM: regulatory protein MarR; KEGG: mgm:Mmc1_3302 regulatory protein, MarR YP_003593657.1 KEGG: swi:Swit_4961 hypothetical protein YP_003593658.1 PFAM: integrase family protein; KEGG: cak:Caul_2217 integrase family protein YP_003593659.1 KEGG: ccs:CCNA_01692 GMP synthase (glutamine-hydrolyzing); TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like YP_003593660.1 PFAM: Fmu (Sun) domain protein; KEGG: ccs:CCNA_01691 16S rRNA m(5)C 967 methyltransferase YP_003593661.1 KEGG: ccs:CCNA_01690 hypothetical protein YP_003593662.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: ccs:CCNA_01689 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_003593663.1 KEGG: gdj:Gdia_2762 hypothetical protein YP_003593664.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: ccs:CCNA_01688 potassium channel protein YP_003593665.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ccs:CCNA_01687 23S rRNA Um2552 2'-O-methyltransferase YP_003593666.1 KEGG: ccs:CCNA_01685 hemimethylated DNA-binding protein YccV; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region YP_003593667.1 TIGRFAM: phenylalanine-4-hydroxylase; KEGG: ccs:CCNA_01684 phenylalanine-4-hydroxylase; PFAM: Aromatic amino acid hydroxylase-like YP_003593668.1 KEGG: ccs:CCNA_01683 acetyltransferase YP_003593669.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_01681 RimI-like acetyltransferase YP_003593670.1 TIGRFAM: succinylarginine dihydrolase; KEGG: ccs:CCNA_01680 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase YP_003593671.1 KEGG: ccs:CCNA_01679 succinylglutamic semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003593672.1 TIGRFAM: arginine/ornithine succinyltransferase subunit; KEGG: ccs:CCNA_01678 arginine N-succinyltransferase, subunit beta; PFAM: arginine N-succinyltransferase beta subunit YP_003593673.1 PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: ccs:CCNA_01677 carboxypeptidase G2 precursor YP_003593674.1 PFAM: surface antigen (D15); KEGG: ccs:CCNA_01675 outer membrane protein YP_003593675.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: ccr:CC_1602 hypothetical protein YP_003593676.1 PFAM: protein of unknown function DUF403; KEGG: ccs:CCNA_01673 hypothetical protein YP_003593677.1 KEGG: ccs:CCNA_01672 transglutaminase-like enzyme, cysteine; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein YP_003593678.1 PFAM: type IV pilus assembly PilZ; KEGG: ccs:CCNA_01671 diguanylate receptor protein DgrA YP_003593679.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: ccs:CCNA_01670 sulfate transport ATP-binding protein CysA; SMART: AAA ATPase YP_003593680.1 KEGG: ccs:CCNA_01669 sulfate transport system permease protein CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003593681.1 KEGG: ccr:CC_1596 sulphate ABC transporter, permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003593682.1 KEGG: pjd:Pjdr2_5949 transferase hexapeptide repeat containing protein YP_003593683.1 KEGG: ccs:CCNA_01660 hypothetical protein YP_003593684.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: ccs:CCNA_01659 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_003593685.1 KEGG: ccs:CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_003593686.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ccs:CCNA_01656 endonuclease/exonuclease/phosphatase family protein YP_003593687.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cak:Caul_2188 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_003593688.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ccs:CCNA_01654 peptidyl-prolyl cis-trans isomerase YP_003593689.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ccs:CCNA_01653 peptidyl-prolyl cis-trans isomerase YP_003593690.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: ccs:CCNA_01652 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_003593691.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: ccs:CCNA_01651 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003593692.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: ccs:CCNA_01650 copper/zinc superoxide dismutase YP_003593693.1 KEGG: pag:PLES_37351 hypothetical protein YP_003593694.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccs:CCNA_01649 transporter, drug/metabolite exporter family YP_003593695.1 KEGG: ccs:CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_003593696.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: ccs:CCNA_01647 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003593697.1 KEGG: ccs:CCNA_01646 dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase YP_003593698.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ccs:CCNA_01645 3-hydroxyisobutyrate dehydrogenase YP_003593699.1 PFAM: OmpA/MotB domain protein; KEGG: ccs:CCNA_01644 chemotaxis MotB protein YP_003593700.1 manually curated; KEGG: ccs:CCNA_01643 arginine-tRNA-protein transferase; PFAM: Arginine-tRNA-protein transferase domain protein YP_003593701.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_01642 gluconate 5-dehydrogenase YP_003593702.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ccs:CCNA_01641 2-nitropropane dioxygenase family protein YP_003593703.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ccs:CCNA_01640 quinone oxidoreductase YP_003593704.1 PFAM: beta-lactamase; KEGG: ccs:CCNA_01639 beta-lactamase family protein YP_003593705.1 KEGG: ccs:CCNA_00783 secreted protease precursor SapA YP_003593706.1 PFAM: beta-lactamase; KEGG: ccs:CCNA_01638 beta-lactamase family protein YP_003593707.1 KEGG: ccs:CCNA_01636 alkaline phosphatase; PFAM: Alkaline phosphatase D-related YP_003593708.1 KEGG: ccs:CCNA_01635 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_003593709.1 KEGG: ccs:CCNA_01634 N-hydroxyarylamine O-acetyltransferase; PFAM: N-acetyltransferase YP_003593710.1 KEGG: ccs:CCNA_01633 GTP-binding protein era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_003593711.1 KEGG: cak:Caul_2981 manganese transport protein YP_003593712.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: ccs:CCNA_01630 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_003593713.1 TIGRFAM: signal peptidase I; KEGG: ccs:CCNA_01629 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_003593714.1 KEGG: ccs:CCNA_01627 holo-(acyl-carrier protein) synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_003593715.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: ccs:CCNA_01626 pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ YP_003593716.1 KEGG: ccs:CCNA_01625 aminobenzoyl-glutamate utilization protein B; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein YP_003593717.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: ccs:CCNA_01624 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003593718.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_01623 phosphohydrolase, MutT/NUDIX family YP_003593719.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: cyt:cce_2617 hypothetical protein YP_003593720.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: ccs:CCNA_01622 ppGpp hydrolase-synthetase RelA/SpoT; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein YP_003593721.1 KEGG: ccs:CCNA_01621 DNA-directed RNA polymerase omega chain; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_003593722.1 KEGG: rhi:NGR_c17870 hypothetical protein YP_003593723.1 KEGG: ccr:CC_1551 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_003593724.1 PFAM: protein of unknown function DUF88; KEGG: ccs:CCNA_01619 cytosolic protein YP_003593725.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: cak:Caul_1722 uracil-DNA glycosylase superfamily protein YP_003593726.1 KEGG: ccs:CCNA_01284 endo-1,4-beta-xylanase YP_003593727.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ccs:CCNA_01283 NAD-dependent oxidoreductase YP_003593728.1 KEGG: ccs:CCNA_01282 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein YP_003593729.1 KEGG: ccs:CCNA_01281 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_003593730.1 PFAM: Protein of unknown function DUF2336; KEGG: ccs:CCNA_01280 hypothetical protein YP_003593731.1 KEGG: ccs:CCNA_01279 ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase YP_003593732.1 KEGG: ccs:CCNA_01278 histidine phosphotransferase domain protein YP_003593733.1 KEGG: ccs:CCNA_01277 D-sorbitol oxidase; TIGRFAM: FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein YP_003593734.1 KEGG: ccs:CCNA_01276 cytochrome C5 YP_003593735.1 KEGG: ccs:CCNA_01275 methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_003593736.1 PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_01274 piperideine-6-carboxylate dehydrogenase YP_003593737.1 PFAM: protein of unknown function DUF188; KEGG: ccs:CCNA_01273 EMG2 protein YP_003593738.1 PFAM: Class I peptide chain release factor; KEGG: ccs:CCNA_01272 peptidyl-tRNA hydrolase family protein YP_003593739.1 KEGG: ccs:CCNA_01271 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003593740.1 KEGG: ccs:CCNA_01270 hypothetical protein YP_003593741.1 PFAM: GcrA cell cycle regulator; KEGG: ccs:CCNA_01269 hypothetical protein YP_003593742.1 PFAM: cytochrome C class I; KEGG: ccs:CCNA_01268 cytochrome C YP_003593743.1 KEGG: cak:Caul_3077 hypothetical protein YP_003593744.1 PFAM: acriflavin resistance protein; KEGG: cak:Caul_3080 acriflavin resistance protein YP_003593745.1 KEGG: cak:Caul_3081 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003593746.1 KEGG: ccs:CCNA_01260 hypothetical protein YP_003593747.1 PFAM: class II aldolase/adducin family protein; KEGG: ccs:CCNA_01259 class II aldolase and adducin protein YP_003593748.1 PFAM: protein of unknown function DUF969; KEGG: ccs:CCNA_01258 permease YP_003593749.1 PFAM: protein of unknown function DUF979; KEGG: ccs:CCNA_01257 permease YP_003593750.1 KEGG: ccs:CCNA_01256 cytosolic protein YP_003593751.1 KEGG: ccs:CCNA_01255 hypothetical protein YP_003593752.1 KEGG: ccs:CCNA_01254 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_003593753.1 TIGRFAM: dihydrodipicolinate synthase; KEGG: ccs:CCNA_01253 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003593754.1 PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01252 soluble lytic murein transglycosylase YP_003593755.1 KEGG: ccs:CCNA_01251 transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593756.1 PFAM: transport system permease protein; KEGG: ccs:CCNA_01250 transporter YP_003593757.1 PFAM: periplasmic binding protein; KEGG: ccs:CCNA_01249 ABC transporter periplasmic binding protein YP_003593758.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_01248 transcriptional regulator, TetR family YP_003593759.1 PFAM: glycosyl transferase family 2; KEGG: ccs:CCNA_01247 N-acetylglucosaminyltransferase YP_003593760.1 KEGG: ccs:CCNA_01246 methyltransferase YP_003593761.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ccs:CCNA_01245 23S rRNA methyltransferase YP_003593762.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: ccs:CCNA_01243 ATP-dependent helicase HrpB; SMART: helicase domain protein; DEAD-like helicase YP_003593763.1 PFAM: amino acid permease-associated region; KEGG: cak:Caul_1589 amino acid permease-associated region YP_003593764.1 KEGG: ccs:CCNA_01241 Zn-dependent hydrolase, glyoxalase II family YP_003593765.1 KEGG: ccs:CCNA_01240 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003593766.1 KEGG: ccs:CCNA_01239 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003593767.1 KEGG: ccs:CCNA_01238 EF-hand domain protein YP_003593768.1 PFAM: protein of unknown function DUF1345; KEGG: cak:Caul_1584 hypothetical protein YP_003593769.1 KEGG: ccs:CCNA_01237 hypothetical protein YP_003593770.1 PFAM: Stress-induced protein, KGG, repeat; KEGG: ccs:CCNA_01236 cytosolic protein YP_003593771.1 KEGG: cak:Caul_1581 methyltransferase; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260; protein of unknown function DUF323 YP_003593772.1 KEGG: ccs:CCNA_01235 transcriptional regulatory protein YP_003593773.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_01233 haloalkane dehalogenase YP_003593774.1 KEGG: ccs:CCNA_01232 cytosolic protein YP_003593775.1 PFAM: protein of unknown function DUF323; KEGG: ccs:CCNA_01231 NIRV family protein YP_003593776.1 PFAM: sulfatase; KEGG: ccs:CCNA_01230 sulfatase family protein YP_003593777.1 PFAM: protein of unknown function DUF1239; KEGG: ccs:CCNA_01226 hypothetical protein YP_003593778.1 KEGG: ccs:CCNA_01225 glycerophosphotransferase-related protein YP_003593779.1 PFAM: polysaccharide biosynthesis protein; KEGG: ccs:CCNA_01224 O-antigen and teichoic acid membrane transport protein YP_003593780.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_01223 acyl-CoA synthetase YP_003593781.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_01222 NADH-ubiquinone oxidoreductase YP_003593782.1 PFAM: phosphopantetheine-binding; KEGG: ccs:CCNA_01221 acyl carrier protein YP_003593783.1 KEGG: ccs:CCNA_01220 serine palmitoyltransferase; PFAM: aminotransferase class I and II YP_003593784.1 KEGG: ccs:CCNA_01219 cytosolic protein YP_003593785.1 PFAM: diacylglycerol kinase catalytic region; KEGG: ccs:CCNA_01218 sphingosine kinase/diacylglycerol kinase-related protein YP_003593786.1 KEGG: ccs:CCNA_01217 phosphatidylglycerophosphate synthase YP_003593787.1 PFAM: metallophosphoesterase; KEGG: ccs:CCNA_01216 phosphohydrolase, Icc family YP_003593788.1 PFAM: Protein of unknown function DUF2141; KEGG: cak:Caul_5428 hypothetical protein YP_003593789.1 PFAM: histidine triad (HIT) protein; KEGG: ccs:CCNA_01215 histidine triad (HIT) protein YP_003593790.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ccs:CCNA_01214 hypothetical protein YP_003593791.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ccs:CCNA_01213 hypothetical protein YP_003593792.1 KEGG: ccs:CCNA_01212 dATP pyrophosphohydrolase YP_003593793.1 KEGG: ccs:CCNA_01211 hypothetical protein YP_003593794.1 PFAM: Nucleotidyl transferase; KEGG: ccs:CCNA_01210 nucleotidyltransferase family protein YP_003593795.1 PFAM: glycosyl transferase group 1; KEGG: swi:Swit_3802 glycosyl transferase, group 1 YP_003593796.1 KEGG: mch:Mchl_3761 membrane protein YP_003593797.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ote:Oter_1336 GDSL family lipase YP_003593798.1 KEGG: cak:Caul_3552 hypothetical protein YP_003593799.1 KEGG: ote:Oter_1170 glycosyl hydrolase YP_003593800.1 KEGG: sus:Acid_0532 hypothetical protein YP_003593801.1 KEGG: ccs:CCNA_00451 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003593802.1 PFAM: FG-GAP repeat protein; KEGG: bsu:BSU07050 polysaccharide lyase; lipoprotein YP_003593803.1 KEGG: sus:Acid_2762 hypothetical protein YP_003593804.1 PFAM: lipolytic protein G-D-S-L family; KEGG: xca:xccb100_0126 exported lipase/esterase YP_003593805.1 PFAM: lipolytic protein G-D-S-L family; KEGG: cpi:Cpin_5506 lipolytic protein G-D-S-L family YP_003593806.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ccs:CCNA_01209 L-lactate dehydrogenase (FMN-linked) YP_003593807.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hba:Hbal_2755 short-chain dehydrogenase/reductase SDR YP_003593808.1 KEGG: mno:Mnod_6621 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_003593809.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: avn:Avin_09220 mandelate racemase/muconate lactonizing enzyme YP_003593810.1 KEGG: cak:Caul_3609 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_003593811.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hba:Hbal_2758 short-chain dehydrogenase/reductase SDR YP_003593812.1 PFAM: amidohydrolase; KEGG: bac:BamMC406_1211 amidohydrolase YP_003593813.1 PFAM: protein of unknown function DUF718; KEGG: hypothetical protein YP_003593814.1 KEGG: zmn:Za10_0394 beta-galactosidase; PFAM: glycosyl hydrolase family 35; glycosyl hydrolase family 43; Beta-galactosidase, domain 2 YP_003593815.1 PFAM: glycosyl hydrolase family 88; KEGG: avi:Avi_0846 hypothetical protein YP_003593816.1 KEGG: ctu:Ctu_25690 hypothetical protein YP_003593817.1 KEGG: ccs:CCNA_01208 two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003593818.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: ccs:CCNA_01207 two-component sensor histidine kinase YP_003593819.1 PFAM: ABC transporter; KEGG: ccs:CCNA_01206 ABC transporter permease protein YP_003593820.1 KEGG: ccs:CCNA_01205 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003593821.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_01204 dTDP-glucose 4,6-dehydratase YP_003593822.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01203 TonB-dependent receptor YP_003593823.1 KEGG: ccs:CCNA_01201 hypothetical protein YP_003593824.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01200 TonB-dependent receptor YP_003593825.1 KEGG: ccs:CCNA_00551 hypothetical protein YP_003593826.1 PFAM: PepSY-associated TM helix domain protein; KEGG: sal:Sala_0028 PepSY-associated TM helix YP_003593827.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sal:Sala_0029 TonB-dependent receptor YP_003593828.1 KEGG: cak:Caul_1090 hypothetical protein YP_003593829.1 PFAM: MaoC domain protein dehydratase; KEGG: hne:HNE_1098 MaoC domain-containing protein YP_003593830.1 PFAM: regulatory protein TetR; KEGG: cvi:CV_0711 TetR family transcriptional regulator YP_003593831.1 KEGG: ccr:CC_2425 HfsE; TIGRFAM: UDP-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003593832.1 KEGG: ccs:CCNA_02515 cytosolic protein YP_003593833.1 KEGG: ccs:CCNA_02517 hypothetical protein YP_003593834.1 KEGG: cak:Caul_1524 proteophosphoglycan 5 YP_003593835.1 KEGG: ccs:CCNA_02518 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase YP_003593836.1 KEGG: cak:Caul_1521 hypothetical protein YP_003593837.1 KEGG: ccs:CCNA_02519 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_003593838.1 KEGG: ccs:CCNA_02520 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit YP_003593839.1 KEGG: ccs:CCNA_02521 endonuclease involved in recombination; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_003593840.1 KEGG: ccs:CCNA_02525 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003593841.1 KEGG: ccs:CCNA_02526 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_003593842.1 KEGG: nca:Noca_0986 hypothetical protein YP_003593843.1 PFAM: protein of unknown function DUF205; KEGG: ccs:CCNA_02528 hypothetical protein YP_003593844.1 KEGG: ccs:CCNA_02529 DNA processing protein; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_003593845.1 PFAM: Methyltransferase type 12; KEGG: ccs:CCNA_02530 SAM-dependent methyltransferase YP_003593846.1 KEGG: ccs:CCNA_02531 proline-rich hypothetical protein YP_003593847.1 KEGG: met:M446_1767 hypothetical protein YP_003593848.1 KEGG: ccs:CCNA_02534 hypothetical protein YP_003593849.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: ccs:CCNA_02535 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein YP_003593850.1 KEGG: cak:Caul_1504 hypothetical protein YP_003593851.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: ccs:CCNA_02537 ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein YP_003593852.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ccs:CCNA_02538 endoglucanase E YP_003593853.1 PFAM: aminotransferase class I and II; KEGG: ccs:CCNA_02539 aspartate aminotransferase YP_003593854.1 KEGG: rme:Rmet_5595 Kef-type K+ transport system NAD-binding component-related membrane protein YP_003593855.1 TIGRFAM: amidohydrolase; KEGG: ccs:CCNA_02540 N-acyl-L-amino acid amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003593856.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_02541 phosphohydrolase (MutT/NUDIX family protein) YP_003593857.1 KEGG: ccs:CCNA_02542 hypothetical protein YP_003593858.1 KEGG: ccs:CCNA_02543 LSU ribosomal protein L33P; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_003593859.1 KEGG: ccs:CCNA_02544 hypothetical protein YP_003593860.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: ccs:CCNA_02545 alkaline phosphatase YP_003593861.1 PFAM: peptidase M10A and M12B matrixin and adamalysin; Hemolysin-type calcium-binding region; KEGG: ccs:CCNA_00783 secreted protease precursor SapA YP_003593862.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ccs:CCNA_02546 GGDEF/response regulator protein PleD; SMART: GGDEF domain containing protein; response regulator receiver YP_003593863.1 KEGG: ccs:CCNA_02547 response regulator receiver protein DivK; PFAM: response regulator receiver; SMART: response regulator receiver YP_003593864.1 KEGG: ccs:CCNA_02548 hypothetical protein YP_003593865.1 PFAM: ROK family protein; KEGG: ccs:CCNA_02549 glucokinase YP_003593866.1 KEGG: ccs:CCNA_02550 DNA polymerase IV-kappa DinB; PFAM: UMUC domain protein DNA-repair protein YP_003593867.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: ccs:CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS YP_003593868.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: ccs:CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA; SMART: AAA ATPase YP_003593869.1 PFAM: histidine triad (HIT) protein; KEGG: ccs:CCNA_02555 adenosine 5'-monophosphoramidase YP_003593870.1 KEGG: ccs:CCNA_02556 hypothetical protein YP_003593871.1 KEGG: cak:Caul_3141 general stress protein YP_003593872.1 PFAM: protein of unknown function DUF482; KEGG: ccs:CCNA_02239 hypothetical protein YP_003593873.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ccs:CCNA_02240 glycerophosphoryl diester phosphodiesterase YP_003593874.1 PFAM: Endoribonuclease L-PSP; KEGG: ccs:CCNA_02241 translation initiation inhibitor YP_003593875.1 KEGG: ccs:CCNA_02242 PHB granule-associated protein, phasin2; TIGRFAM: phasin family protein; PFAM: Phasin YP_003593876.1 KEGG: ccs:CCNA_02243 D-alanyl-D-alanine serine-type carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein YP_003593877.1 PFAM: aminotransferase class I and II; KEGG: ccs:CCNA_02244 aminotransferase class I family protein YP_003593878.1 KEGG: ccs:CCNA_02245 molecular chaperones (DnaJ family); PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003593879.1 PFAM: ATPase MipZ; KEGG: ccs:CCNA_02246 division plane positioning ATPase MipZ YP_003593880.1 TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; KEGG: ccs:CCNA_02247 pantoate-beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003593881.1 KEGG: ccs:CCNA_02248 hypothetical protein YP_003593882.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_02249 conserved cytosolic protein YP_003593883.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: ccs:CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit YP_003593884.1 KEGG: cak:Caul_3152 hypothetical protein YP_003593885.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_02251 methylglutaconyl-CoA hydratase YP_003593886.1 KEGG: ccs:CCNA_02252 methylcrotonyl-CoA carboxylase carboxyl transferase subunit; PFAM: carboxyl transferase YP_003593887.1 PFAM: Patatin; cyclic nucleotide-binding; KEGG: ccs:CCNA_02253 hybrid CAP effector domain/patatin phospholipase protein; SMART: cyclic nucleotide-binding YP_003593888.1 KEGG: ank:AnaeK_3262 hypothetical protein YP_003593889.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_02254 isovaleryl-CoA dehydrogenase YP_003593890.1 PFAM: glycosyl hydrolase family 24; KEGG: ccs:CCNA_02255 lysozyme-family localization factor SpmX YP_003593891.1 KEGG: ccs:CCNA_02256 Mg2+ transporter MgtE; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region YP_003593892.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: cak:Caul_3160 hypothetical protein YP_003593893.1 TIGRFAM: lipoate-protein ligase B; KEGG: ccs:CCNA_02258 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_003593894.1 PFAM: protein of unknown function DUF805; KEGG: ccs:CCNA_02260 hypothetical protein YP_003593895.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: ccs:CCNA_02261 propionyl-CoA carboxylase biotin-containing subunit YP_003593896.1 KEGG: ccs:CCNA_02262 laminin G domain protein YP_003593897.1 PFAM: protein of unknown function DUF336; KEGG: ccs:CCNA_02263 protein GlcG YP_003593898.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: cte:CT1225 N-acetylmuramoyl-L-alanine amidase YP_003593899.1 PFAM: ThiJ/PfpI domain protein; KEGG: ccs:CCNA_02264 ThiJ/PfpI family YP_003593900.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: ccs:CCNA_02265 peptide methionine sulfoxide reductase MsrB; PFAM: Methionine sulfoxide reductase B YP_003593901.1 PFAM: protein of unknown function DUF1234; KEGG: ccs:CCNA_02267 hypothetical protein YP_003593902.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: jan:Jann_1321 short-chain dehydrogenase/reductase SDR YP_003593903.1 KEGG: ccr:CC_2186 hypothetical protein YP_003593904.1 PFAM: peptidase S58 DmpA; KEGG: ccs:CCNA_02269 L-aminopeptidase/D-esterase DmpA YP_003593905.1 KEGG: ccs:CCNA_02270 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003593906.1 KEGG: ccs:CCNA_02272 hypothetical protein YP_003593907.1 KEGG: ccs:CCNA_02273 glutathione peroxidase YP_003593908.1 KEGG: ccs:CCNA_02274 EF-Hand domain protein YP_003593909.1 PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: ccs:CCNA_02275 hypothetical protein YP_003593910.1 KEGG: ccs:CCNA_02277 hemin receptor; TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003593911.1 PFAM: SNARE associated Golgi protein; KEGG: ccs:CCNA_02278 membrane-associated alkaline phosphatase YP_003593912.1 KEGG: ccs:CCNA_02279 disulfide bond formation protein B YP_003593913.1 PFAM: Ubiquinone biosynthesis protein COQ7; KEGG: ccs:CCNA_02280 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_003593914.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: ccs:CCNA_02281 membrane alanine aminopeptidase YP_003593915.1 KEGG: ccs:CCNA_02282 hypothetical protein YP_003593916.1 KEGG: cak:Caul_3232 hypothetical protein YP_003593917.1 KEGG: ccs:CCNA_02283 HNH endonuclease family protein; PFAM: HNH endonuclease; SMART: HNH nuclease YP_003593918.1 KEGG: ccs:CCNA_02284 DNA-3-methyladenine glycosylase II; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_003593919.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: ccs:CCNA_02285 transcription elongation factor GreB YP_003593920.1 KEGG: ccs:CCNA_02286 hypothetical protein YP_003593921.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_02287 transcriptional regulator, TetR family YP_003593922.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: cak:Caul_3205 glutamyl-Q tRNA(Asp) synthetase YP_003593923.1 PFAM: regulatory protein ArsR; KEGG: ccs:CCNA_02289 transcriptional regulator, MarR/EmrR family YP_003593924.1 KEGG: ccs:CCNA_02290 hypothetical protein YP_003593925.1 PFAM: acyltransferase 3; KEGG: ccs:CCNA_02291 hypothetical protein YP_003593926.1 KEGG: ccs:CCNA_02292 acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase YP_003593927.1 PFAM: Redoxin domain protein; KEGG: ccs:CCNA_02293 thiol:disulfide interchange protein TlpA YP_003593928.1 KEGG: ccs:CCNA_02294 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_003593929.1 KEGG: ccs:CCNA_02295 hypothetical protein YP_003593930.1 KEGG: ccs:CCNA_02296 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003593931.1 KEGG: cak:Caul_3214 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003593932.1 PFAM: phosphoribosyltransferase; KEGG: ccs:CCNA_02297 hypoxanthine-guanine phosphoribosyltransferase YP_003593933.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: ccs:CCNA_02298 MJ0042 family finger-like domain protein YP_003593934.1 SMART: AAA ATPase; manually curated; TIGRFAM: cell division ATP-binding protein FtsE; KEGG: ccs:CCNA_02299 cell division ATP-binding protein FtsE; PFAM: ABC transporter related YP_003593935.1 PFAM: protein of unknown function DUF214; KEGG: ccs:CCNA_02300 cell division protein FtsX YP_003593936.1 PFAM: protein of unknown function DUF218; KEGG: ccs:CCNA_02301 hypothetical protein YP_003593937.1 KEGG: cak:Caul_3220 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003593938.1 PFAM: Protein of unknown function DUF2125; KEGG: ccs:CCNA_02304 hypothetical protein YP_003593939.1 PFAM: Chorismate mutase, type II; KEGG: ccs:CCNA_02305 chorismate mutase-family protein YP_003593940.1 KEGG: ccs:CCNA_02306 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003593941.1 KEGG: ccs:CCNA_02307 arogenate dehydrogenase/prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_003593942.1 KEGG: ccs:CCNA_02309 EF hand domain protein; PFAM: EF-Hand domain; SMART: Calcium-binding EF-hand-containing protein YP_003593943.1 KEGG: cak:Caul_4725 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003593944.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cak:Caul_1669 hypothetical protein YP_003593945.1 PFAM: GumN family protein; KEGG: ccs:CCNA_02312 SLA2 protein YP_003593946.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_02313 alpha/beta hydrolase-family protein YP_003593947.1 KEGG: ccs:CCNA_02314 hypothetical protein YP_003593948.1 KEGG: ccs:CCNA_02315 transcriptional regulator, Cro/CI family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003593949.1 KEGG: ccs:CCNA_02316 hypothetical protein YP_003593950.1 KEGG: ccs:CCNA_02317 hypothetical protein YP_003593951.1 KEGG: ccs:CCNA_02318 hypothetical protein YP_003593952.1 KEGG: ccs:CCNA_02319 hypothetical protein YP_003593953.1 PFAM: 2-deoxycytidine 5-triphosphate deaminase; KEGG: ccs:CCNA_02320 deoxycytidine triphosphate deaminase YP_003593954.1 TIGRFAM: O-succinylhomoserine sulfhydrylase; KEGG: ccr:CC_2238 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003593955.1 PFAM: ApaG domain protein; KEGG: ccs:CCNA_02322 ApaG protein YP_003593956.1 PFAM: Hsp33 protein; KEGG: ccs:CCNA_02324 heat shock protein 33 HSP33 YP_003593957.1 KEGG: ccs:CCNA_02326 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_003593958.1 PFAM: regulatory protein TetR; KEGG: swi:Swit_3660 resolvase domain-containing protein YP_003593959.1 PFAM: GcrA cell cycle regulator; KEGG: ccs:CCNA_02328 hypothetical protein YP_003593960.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: ccs:CCNA_02329 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_003593961.1 PFAM: Protein of unknown function DUF2093; KEGG: ccs:CCNA_02330 hypothetical protein YP_003593962.1 KEGG: ccs:CCNA_02332 chemotaxis receiver protein cheYIII; PFAM: response regulator receiver; SMART: response regulator receiver YP_003593963.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: ccs:CCNA_02333 lipid A biosynthesis lauroyl acyltransferase YP_003593964.1 KEGG: ccs:CCNA_02334 transcriptional regulator of stalk biogenesis StaR; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003593965.1 KEGG: ccs:CCNA_02335 myo-inositol-1(or 4)-monophosphatase; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase YP_003593966.1 KEGG: ccs:CCNA_02336 lysophospholipase L2; PFAM: alpha/beta hydrolase fold YP_003593967.1 PFAM: Sterol-binding domain protein; KEGG: ccs:CCNA_02337 nonspecific lipid-transfer protein YP_003593968.1 KEGG: cak:Caul_1217 hypothetical protein YP_003593969.1 KEGG: ccs:CCNA_02339 methyltransferase YP_003593970.1 KEGG: ccs:CCNA_02340 methyltransferase YP_003593971.1 PFAM: heat shock protein Hsp20; KEGG: ccs:CCNA_02341 small heat shock protein YP_003593972.1 PFAM: pentapeptide repeat protein; KEGG: ccs:CCNA_02342 hypothetical protein YP_003593973.1 PFAM: pentapeptide repeat protein; KEGG: ccs:CCNA_02343 hypothetical protein YP_003593974.1 TIGRFAM: phosphoglycerate mutase; KEGG: ccs:CCNA_02344 phosphoglycerate mutase; PFAM: phosphoglycerate mutase YP_003593975.1 KEGG: ccs:CCNA_02345 hypothetical protein YP_003593976.1 SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: ccs:CCNA_02346 arabinose-5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_003593977.1 KEGG: ccs:CCNA_02347 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003593978.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_02348 acetyltransferase, GNAT family YP_003593979.1 PFAM: amidohydrolase; KEGG: gau:GAU_2057 hypothetical protein YP_003593980.1 KEGG: cak:Caul_5316 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; MASE1 domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003593981.1 KEGG: ccs:CCNA_02349 bark storage protein A precursor; TIGRFAM: MTA/SAH nucleosidase; PFAM: purine or other phosphorylase family 1 YP_003593982.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: ccs:CCNA_02350 Dabb-family alpha/beta stress response protein YP_003593983.1 TIGRFAM: uracil phosphoribosyltransferase; KEGG: ccs:CCNA_02351 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003593984.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: ccs:CCNA_02352 membrane-bound aldehyde dehydrogenase, large subunit YP_003593985.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: ccs:CCNA_02353 membrane-bound aldehyde dehydrogenase iron-sulfur protein YP_003593986.1 PFAM: Putitive phosphate transport regulator; KEGG: cak:Caul_1415 hypothetical protein YP_003593987.1 PFAM: phosphate transporter; KEGG: cak:Caul_1414 phosphate transporter YP_003593988.1 PFAM: NUDIX hydrolase; KEGG: cak:Caul_1413 NUDIX hydrolase YP_003593989.1 KEGG: ccs:CCNA_02355 endonuclease III; PFAM: iron-sulfur cluster loop; SMART: HhH-GPD family protein YP_003593990.1 PFAM: protein of unknown function DUF72; KEGG: cak:Caul_1411 hypothetical protein YP_003593991.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: ccs:CCNA_02356 D-alanyl-D-alanine dipeptidase YP_003593992.1 KEGG: ccs:CCNA_02357 malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase (acylating); TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003593993.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: ccs:CCNA_02358 FMN reductase YP_003593994.1 KEGG: ccs:CCNA_02362 GAF domain-containing protein YP_003593995.1 KEGG: ara:Arad_1311 hypothetical protein YP_003593996.1 KEGG: hypothetical protein YP_003593997.1 KEGG: ccs:CCNA_02364 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003593998.1 TIGRFAM: glucan 1,4-alpha-glucosidase; KEGG: ccs:CCNA_02365 glucoamylase; PFAM: Glucodextranase N; glycosyl hydrolase 15-related YP_003593999.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_02366 cytoplasmic membrane maltose transporter MalY YP_003594000.1 KEGG: ccs:CCNA_02367 maltose transport transcriptional repressor MalI; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003594001.1 manually curated; PFAM: alpha amylase catalytic region; KEGG: ccs:CCNA_02368 alpha-glucosidase; SMART: alpha amylase catalytic sub domain YP_003594002.1 KEGG: ccs:CCNA_02369 alpha-amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003594003.1 KEGG: ccs:CCNA_02370 TonB-dependent maltose outer membrane transporter MalA; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594004.1 KEGG: ccs:CCNA_02375 hypothetical protein YP_003594005.1 PFAM: phosphatidylserine decarboxylase-related; KEGG: phosphatidylserine decarboxylase YP_003594006.1 PFAM: protein of unknown function DUF541; KEGG: ccs:CCNA_02378 hypothetical protein YP_003594007.1 KEGG: ccs:CCNA_02379 hypothetical protein YP_003594008.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: ccs:CCNA_02380 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_003594009.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_02384 very-long-chain acyl-CoA synthetase YP_003594010.1 PFAM: Peptidase A2A, retrovirus RVP subgroup; KEGG: cak:Caul_3541 hypothetical protein YP_003594011.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ccs:CCNA_02385 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase class II YP_003594012.1 PFAM: O-antigen polymerase; KEGG: ccs:CCNA_02386 O-antigen ligase related enzyme YP_003594013.1 KEGG: ccs:CCNA_02387 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003594014.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: ccs:CCNA_02388 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; regulatory protein DeoR YP_003594015.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: ccs:CCNA_02389 glucosamine-1-phosphate acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_003594016.1 KEGG: ccs:CCNA_02390 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003594017.1 KEGG: rca:Rcas_4035 hypothetical protein YP_003594018.1 KEGG: xac:XAC1536 hypothetical protein YP_003594019.1 KEGG: app:CAP2UW1_2568 protein of unknown function DUF214 YP_003594020.1 KEGG: sen:SACE_2650 integral membrane protein YP_003594021.1 KEGG: scl:sce7117 hypothetical protein YP_003594022.1 KEGG: plu:plu1461 hypothetical protein YP_003594023.1 KEGG: lcb:LCABL_10720 hypothetical protein YP_003594024.1 KEGG: pcr:Pcryo_1711 phosphatidate cytidylyltransferase YP_003594025.1 KEGG: rle:RL3940 hypothetical protein YP_003594026.1 KEGG: Gm3178; predicted gene 3178 YP_003594027.1 KEGG: cak:Caul_2022 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_003594028.1 PFAM: integrase family protein; KEGG: mno:Mnod_5804 integrase family protein YP_003594029.1 KEGG: cak:Caul_5182 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003594030.1 KEGG: rpt:Rpal_2401 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003594031.1 PFAM: peptidase M28; KEGG: swi:Swit_0237 peptidase M28 YP_003594032.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ddc:Dd586_2068 transcriptional regulator, LysR family YP_003594033.1 KEGG: ddc:Dd586_2069 beta-lactamase-like protein YP_003594034.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_2408 transcriptional regulator, TetR family YP_003594035.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A2677 short-chain dehydrogenase/oxidoreductase YP_003594036.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bvi:Bcep1808_2561 LysR family transcriptional regulator YP_003594037.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pmy:Pmen_1651 short-chain dehydrogenase/reductase SDR YP_003594038.1 PFAM: protein of unknown function DUF1486; KEGG: rop:ROP_32090 hypothetical protein YP_003594039.1 KEGG: msl:Msil_1715 hydroxypyruvate reductase; PFAM: MOFRL domain protein YP_003594040.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hne:HNE_1470 TonB dependent receptor YP_003594041.1 PFAM: thioesterase superfamily protein; KEGG: sal:Sala_3064 thioesterase superfamily protein YP_003594042.1 PFAM: class II aldolase/adducin family protein; KEGG: hne:HNE_1473 aldolase, class II YP_003594043.1 KEGG: pla:Plav_0539 hypothetical protein YP_003594044.1 KEGG: pla:Plav_0538 hypothetical protein YP_003594045.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: pla:Plav_0537 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003594046.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bid:Bind_3456 LysR family transcriptional regulator YP_003594047.1 KEGG: pla:Plav_0535 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003594048.1 TIGRFAM: tartrate dehydrogenase; KEGG: pla:Plav_0534 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003594049.1 KEGG: cak:Caul_0485 CitMHS family citrate/H+ symporter; TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter YP_003594050.1 KEGG: sal:Sala_2237 hypothetical protein YP_003594051.1 KEGG: cak:Caul_1578 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003594052.1 PFAM: protein of unknown function DUF140; KEGG: cak:Caul_1577 hypothetical protein YP_003594053.1 PFAM: Mammalian cell entry related domain protein; KEGG: cak:Caul_1576 hypothetical protein YP_003594054.1 PFAM: toluene tolerance family protein; KEGG: ccs:CCNA_03807 organic solvent resistance transport system Ttg2D protein YP_003594055.1 PFAM: VacJ family lipoprotein; KEGG: ccs:CCNA_03806 outer membrane lipoprotein YP_003594056.1 KEGG: cak:Caul_1685 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003594057.1 PFAM: MltA-interacting MipA family protein; KEGG: hne:HNE_2224 MipA family protein YP_003594058.1 manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: pzu:PHZ_c2233 RNA polymerase sigma-70 factor, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003594059.1 PFAM: FecR protein; KEGG: pzu:PHZ_c2234 transcriptional regulator YP_003594060.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2726 TonB-dependent receptor plug YP_003594061.1 PFAM: VacJ family lipoprotein; KEGG: bid:Bind_2594 VacJ family lipoprotein YP_003594062.1 KEGG: cak:Caul_0808 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003594063.1 KEGG: ccs:CCNA_03300 multidrug resistance efflux pump, periplasmic component; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003594064.1 PFAM: acriflavin resistance protein; KEGG: ccs:CCNA_03301 cation/multidrug efflux pump AcrB YP_003594065.1 PFAM: Glutathione S-transferase domain; KEGG: mpo:Mpop_3821 glutathione S-transferase domain YP_003594066.1 PFAM: Methyltransferase type 11; KEGG: rpb:RPB_3655 SAM binding protein YP_003594067.1 manually curated; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; KEGG: cai:Caci_8705 drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003594068.1 PFAM: protein of unknown function UPF0074; KEGG: swi:Swit_2165 BadM/Rrf2 family transcriptional regulator YP_003594069.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: avi:Avi_2791 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003594070.1 KEGG: cak:Caul_0637 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_003594071.1 KEGG: bpa:BPP1399 hypothetical protein YP_003594072.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pzu:PHZ_c0214 ferredoxin reductase YP_003594073.1 KEGG: ccs:CCNA_02601 glutathione-dependent formaldehyde dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_003594074.1 PFAM: Uncharacterised conserved protein UCP07580; KEGG: sal:Sala_2084 FF domain-containing protein YP_003594075.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: mlo:mll3593 hypothetical protein YP_003594076.1 PFAM: cytochrome P450; KEGG: hne:HNE_2797 cytochrome P450 family protein YP_003594077.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rha:RHA1_ro06693 5-valerolactone hydrolase YP_003594078.1 PFAM: alanine racemase domain protein; KEGG: mlo:mll6666 D-serine deaminase YP_003594079.1 PFAM: HpcH/HpaI aldolase; KEGG: rpe:RPE_1802 HpcH/HpaI aldolase YP_003594080.1 TIGRFAM: FAD-linked oxidoreductase; KEGG: cak:Caul_2680 FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein YP_003594081.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cur:cur_0024 short-chain dehydrogenase YP_003594082.1 PFAM: class II aldolase/adducin family protein; KEGG: eli:ELI_05455 class II aldolase/adducin domain-containing protein YP_003594083.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hne:HNE_2423 TonB-dependent receptor YP_003594084.1 KEGG: bja:blr3932 N,N-dimethylformamidase large subunit YP_003594085.1 PFAM: major facilitator superfamily MFS_1; KEGG: cak:Caul_2678 MFS transporter YP_003594086.1 PFAM: regulatory protein TetR; KEGG: pzu:PHZ_c2105 transcriptional regulator, TetR family YP_003594087.1 PFAM: Endoribonuclease L-PSP; KEGG: rlg:Rleg_6667 endoribonuclease L-PSP YP_003594088.1 PFAM: ferredoxin; KEGG: ccs:CCNA_03639 ferredoxin, 2Fe-2s YP_003594089.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mjl:Mjls_5575 glyoxalase/bleomycin resistance protein/dioxygenase YP_003594090.1 KEGG: ccs:CCNA_01844 DNA integration/recombination/inversion protein YP_003594091.1 KEGG: pzu:PHZ_c0619 nitric oxide reductase, subunit B YP_003594092.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: ccs:CCNA_01477 oxygen-independent coproporphyrinogen-III oxidase HemN; PFAM: HemN domain protein; Radical SAM domain protein YP_003594093.1 KEGG: pzu:PHZ_p0186 transcriptonal regulator (about nitrogen fixation regulation protein,cAMP-binding protein); PFAM: regulatory protein Crp; cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_003594094.1 KEGG: pzu:PHZ_c0618 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003594095.1 KEGG: pzu:PHZ_c0617 plastocyanin; TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein YP_003594096.1 KEGG: pzu:PHZ_c0615 ribonucleotide reductase large subunit; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein YP_003594097.1 KEGG: cak:Caul_3869 hypothetical protein YP_003594098.1 TIGRFAM: nitrite reductase, copper-containing; KEGG: pzu:PHZ_c0614 multicopper oxidase; PFAM: multicopper oxidase type 3 YP_003594099.1 KEGG: pzu:PHZ_c1196 regulator of cell morphogenesis and NO signaling; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein YP_003594100.1 KEGG: mno:Mnod_2117 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003594101.1 PFAM: Alternative oxidase; KEGG: pzu:PHZ_c3018 alternative oxidase YP_003594102.1 KEGG: cai:Caci_5089 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver YP_003594103.1 PFAM: NnrS family protein; KEGG: cak:Caul_3859 NnrS family protein YP_003594104.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01859 TonB-dependent receptor YP_003594105.1 PFAM: PepSY-associated TM helix domain protein; KEGG: ccs:CCNA_01860 rare lipoprotein B precursor YP_003594106.1 KEGG: pla:Plav_2036 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; regulatory protein LysR; SMART: regulatory protein LuxR YP_003594107.1 PFAM: FG-GAP repeat protein; Hemolysin-type calcium-binding region; KEGG: dal:Dalk_1843 FG-GAP repeat protein YP_003594108.1 KEGG: ccs:CCNA_00783 secreted protease precursor SapA YP_003594109.1 KEGG: sfr:Sfri_3018 hypothetical protein YP_003594110.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cpi:Cpin_5381 cupin 2 conserved barrel domain protein YP_003594111.1 PFAM: alpha/beta hydrolase fold; KEGG: mva:Mvan_1601 hypothetical protein YP_003594112.1 PFAM: monooxygenase FAD-binding; KEGG: scl:sce7022 2,4-dichlorophenol 6-monooxygenase YP_003594113.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ace:Acel_1040 short-chain dehydrogenase/reductase SDR YP_003594114.1 PFAM: glycosyl transferase family 28; KEGG: bja:bll2692 glycosyltransferase YP_003594115.1 KEGG: cak:Caul_0713 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003594116.1 KEGG: scl:sce1255 cytochrome C YP_003594117.1 manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll6962 transcriptional regulatory protein; SMART: Helix-turn-helix, AraC domain YP_003594118.1 PFAM: nitrogen regulatory protein P-II; KEGG: pzu:PHZ_c1361 nitrogen regulatory protein P-II-2 YP_003594119.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pzu:PHZ_c0052 multiple antibiotic transporter YP_003594120.1 KEGG: cak:Caul_0624 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003594121.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bfs:BF2104 transmembrane protein YP_003594122.1 KEGG: cak:Caul_1677 hypothetical protein YP_003594123.1 KEGG: vacuole-associated enzyme activator complex component (Vac14) YP_003594124.1 PFAM: Type IV / VI secretion system, DotU; KEGG: xac:XAC4119 hypothetical protein YP_003594125.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mdi:METDI5604 mannose-6-phosphate isomerase YP_003594126.1 KEGG: msl:Msil_3904 two-component VirA-like sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003594127.1 KEGG: msl:Msil_3903 cytochrome-c peroxidase; PFAM: Di-haem cytochrome C peroxidase YP_003594128.1 KEGG: xop:PXO_00241 VirG; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003594129.1 KEGG: mag:amb0602 outer membrane protein and related peptidoglycan-associated protein YP_003594130.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAM2790 3-hydroxyphenylpropionic transporter MhpT YP_003594131.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_6949 feruloyl-CoA synthase YP_003594132.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mlo:mlr1841 p-hydroxycinnamoyl CoA hydratase/lyase YP_003594133.1 KEGG: pfl:PFL_4906 amino acid permease; manually curated; PFAM: amino acid permease-associated region YP_003594134.1 KEGG: bid:Bind_1806 hypothetical protein YP_003594135.1 KEGG: vap:Vapar_5475 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003594136.1 PFAM: glycosyl hydrolase family 81; KEGG: tfu:Tfu_2130 hypothetical protein YP_003594137.1 KEGG: syd:Syncc9605_2600 subtilisin-like serine protease-like YP_003594138.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; KEGG: cak:Caul_4165 type I secretion system ATPase; SMART: AAA ATPase YP_003594139.1 KEGG: cak:Caul_4164 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein hemolysin D YP_003594140.1 KEGG: ccs:CCNA_01588 ABC transporter permease protein YP_003594141.1 KEGG: ccs:CCNA_01587 ABC transporter permease protein YP_003594142.1 KEGG: ccs:CCNA_01586 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003594143.1 KEGG: ccs:CCNA_01585 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594144.1 KEGG: ccs:CCNA_03073 hypothetical protein YP_003594145.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_03074 C factor cell-cell signaling protein YP_003594146.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: cak:Caul_1358 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003594147.1 KEGG: ccs:CCNA_02395 hypothetical protein YP_003594148.1 PFAM: Outer mitochondrial membrane transport complex protein, Tom37/Metaxin; Glutathione S-transferase domain; KEGG: ccs:CCNA_02396 hypothetical protein YP_003594149.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: ccs:CCNA_02397 transcriptional regulator, DeoR family YP_003594150.1 KEGG: ccs:CCNA_02398 endo-1,4-beta-xylanase YP_003594151.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ccs:CCNA_02399 23S rRNA methyltransferase YP_003594152.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_02400 transporter, major facilitator superfamily YP_003594153.1 KEGG: ccs:CCNA_02401 transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003594154.1 KEGG: ccs:CCNA_02402 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003594155.1 PFAM: protein of unknown function DUF140; KEGG: ccs:CCNA_02403 ABC transporter permease protein YP_003594156.1 KEGG: ccs:CCNA_02404 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003594157.1 PFAM: Mammalian cell entry related domain protein; KEGG: ccs:CCNA_02405 ABC membrane transporter, periplasmic component YP_003594158.1 PFAM: protein of unknown function DUF330; KEGG: ccs:CCNA_02406 membrane lipoprotein YP_003594159.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_02407 hypothetical protein YP_003594160.1 PFAM: Protein of unknown function DUF2336; KEGG: ccs:CCNA_02408 hypothetical protein YP_003594161.1 KEGG: ccs:CCNA_02409 hybrid sensor histidine kinase/receiver protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003594162.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ccs:CCNA_02410 alpha-methylacyl-CoA racemase YP_003594163.1 PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_02411 lytic transglycosylase PleA YP_003594164.1 TIGRFAM: TonB family protein; KEGG: ccs:CCNA_02412 TonB protein YP_003594165.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_02413 acyl-CoA dehydrogenase YP_003594166.1 PFAM: FAD dependent oxidoreductase; KEGG: ccs:CCNA_02414 DadA-related amino acid oxidase YP_003594167.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: ccs:CCNA_02415 HTH transcriptional regulator; SMART: helix-turn-helix domain protein YP_003594168.1 KEGG: pzu:PHZ_c1134 DNA topoisomerase IB YP_003594169.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: cak:Caul_1773 Ku protein; SMART: Ku domain protein YP_003594170.1 KEGG: rme:Rmet_1763 hypothetical protein YP_003594171.1 KEGG: cak:Caul_1769 ATP-dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit YP_003594172.1 KEGG: cak:Caul_2893 hypothetical protein YP_003594173.1 KEGG: ccs:CCNA_02416 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003594174.1 KEGG: ccs:CCNA_02417 biotin synthase related domain containing protein; PFAM: Radical SAM domain protein; helix-hairpin-helix motif; SMART: Elongator protein 3/MiaB/NifB YP_003594175.1 KEGG: ccs:CCNA_02418 uracil DNA glycosylase superfamily protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily YP_003594176.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cak:Caul_1421 hemerythrin HHE cation binding region protein YP_003594177.1 KEGG: bra:BRADO2087 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003594178.1 KEGG: pol:Bpro_2462 transmembrane protein YP_003594179.1 TIGRFAM: TonB family protein; KEGG: ccs:CCNA_02419 TonB1 protein YP_003594180.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ccs:CCNA_02420 TonB accessory protein ExbD YP_003594181.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ccs:CCNA_02421 TonB accessory protein ExbB YP_003594182.1 PFAM: protein of unknown function DUF329; KEGG: ccs:CCNA_02425 non-essential pilus assembly protein YP_003594183.1 PFAM: RNA-binding protein AU-1/Ribonuclease E/G; KEGG: ccs:CCNA_02426 ribonuclease, CafA family YP_003594184.1 KEGG: ccs:CCNA_02427 septum formation protein Maf; TIGRFAM: maf protein; PFAM: Maf family protein YP_003594185.1 KEGG: cak:Caul_3585 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003594186.1 KEGG: ccs:CCNA_02429 arsenate reductase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003594187.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_02430 conserved cytosolic protein YP_003594188.1 TIGRFAM: histidinol dehydrogenase; KEGG: ccs:CCNA_02431 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003594189.1 manually curated; TIGRFAM: NCS1 nucleoside transporter family; KEGG: ccs:CCNA_02432 cytosine/uracil/thiamine/allantoin permease family protein; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_003594190.1 KEGG: ccs:CCNA_02434 cytosolic protein YP_003594191.1 KEGG: ccs:CCNA_02435 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003594192.1 KEGG: ccs:CCNA_02436 hypothetical protein YP_003594193.1 KEGG: ccr:CC_0543 hypothetical protein YP_003594194.1 KEGG: ccs:CCNA_00576 oligopeptide-binding protein OppA; PFAM: histidine acid phosphatase YP_003594195.1 PFAM: Protein of unknown function DUF2261, transmembrane; KEGG: ccs:CCNA_00575 hypothetical protein YP_003594196.1 KEGG: ccs:CCNA_00574 alpha-N-acetylglucosaminidase; PFAM: alpha-N-acetylglucosaminidase YP_003594197.1 KEGG: ccs:CCNA_00573 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594198.1 KEGG: cak:Caul_0295 PTS system, N-acetylglucosamine-specific IIBC subunit; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site YP_003594199.1 KEGG: ccs:CCNA_00571 phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system, glucose-specific IIA subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003594200.1 KEGG: ccs:CCNA_00570 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003594201.1 KEGG: ccs:CCNA_00569 glucosamine-6-phosphate deaminase; PFAM: sugar isomerase (SIS) YP_003594202.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: ccs:CCNA_00568 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003594203.1 KEGG: ccs:CCNA_00567 hypothetical protein; TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92 YP_003594204.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01196 iron-regulated outer membrane virulence protein YP_003594205.1 KEGG: cvi:CV_2848 outer membrane component of multidrug efflux pump; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003594206.1 PFAM: secretion protein hemolysin D; KEGG: rme:Rmet_4791 secretion protein HlyD YP_003594207.1 PFAM: protein of unknown function DUF1656; KEGG: mpo:Mpop_0239 protein of unknown function DUF1656 YP_003594208.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: vap:Vapar_0867 fusaric acid resistance protein conserved region YP_003594209.1 KEGG: bpe:BP2664 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003594210.1 PFAM: dienelactone hydrolase; KEGG: cak:Caul_0145 dienelactone hydrolase YP_003594211.1 KEGG: ccr:CC_2359 N4-(beta-N-acetylglucosaminyl)-L-asparaginase, PFAM: peptidase T2 asparaginase 2 YP_003594212.1 PFAM: CutC family protein; KEGG: ccs:CCNA_02445 copper homeostasis protein CutC YP_003594213.1 PFAM: glutathionylspermidine synthase; KEGG: ccs:CCNA_02446 glutathionylspermidine synthase family YP_003594214.1 PFAM: PspA/IM30 family protein; KEGG: ccs:CCNA_02447 alpha helical protein YP_003594215.1 PFAM: Protein of unknown function DUF2170; KEGG: ccs:CCNA_02448 hypothetical protein YP_003594216.1 PFAM: Protein of unknown function DUF2491; KEGG: ccs:CCNA_02449 hypothetical protein YP_003594217.1 PFAM: protein of unknown function DUF350; KEGG: ccs:CCNA_02450 surface protein YP_003594218.1 KEGG: ccs:CCNA_02451 surface protein YP_003594219.1 KEGG: ccs:CCNA_02452 hypothetical protein YP_003594220.1 KEGG: ccs:CCNA_02453 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003594221.1 KEGG: ccs:CCNA_02454 N-methylhydantoinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein YP_003594222.1 PFAM: protein of unknown function UPF0016; KEGG: ccs:CCNA_02455 hypothetical protein YP_003594223.1 KEGG: ccs:CCNA_02456 ribonuclease III YP_003594224.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ccs:CCNA_02457 nitropropane dioxygenase/trans-enoyl-CoA reductase family protein YP_003594225.1 KEGG: ccs:CCNA_02458 methylmalonyl-CoA mutase beta subunit; PFAM: methylmalonyl-CoA mutase YP_003594226.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: ccs:CCNA_02459 methylmalonyl-CoA mutase alpha subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_003594227.1 KEGG: cak:Caul_3634 hypothetical protein YP_003594228.1 TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: ccs:CCNA_02568 LAO/AO transport system kinase; SMART: AAA ATPase YP_003594229.1 KEGG: gbe:GbCGDNIH1_0258 hypothetical protein YP_003594230.1 KEGG: ccs:CCNA_01135 hypothetical protein YP_003594231.1 KEGG: ccs:CCNA_01134 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; HemY domain protein; SMART: regulatory protein LuxR YP_003594232.1 KEGG: cak:Caul_1534 hypothetical protein YP_003594233.1 KEGG: ccs:CCNA_01132 sensory transduction histidine kinase/receiver protein CckA; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003594234.1 KEGG: ccs:CCNA_01131 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_003594235.1 KEGG: ccs:CCNA_01130 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_003594236.1 KEGG: ccs:CCNA_01129 flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_003594237.1 KEGG: ccs:CCNA_01571 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_003594238.1 KEGG: ccs:CCNA_01128 hypothetical protein YP_003594239.1 KEGG: ccs:CCNA_01125 ribonuclease H YP_003594240.1 KEGG: cak:Caul_1248 methylglyoxal synthase; PFAM: MGS domain protein YP_003594241.1 PFAM: aminotransferase class I and II; KEGG: ccr:CC_1071 aminotransferase YP_003594242.1 KEGG: ami:Amir_2060 hypothetical protein YP_003594243.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_00587 secretory tripeptidyl aminopeptidase YP_003594244.1 PFAM: LytTr DNA-binding region; KEGG: ccr:CC_0551 hypothetical protein YP_003594245.1 KEGG: cak:Caul_1245 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003594246.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rce:RC1_0326 TonB dependent receptor YP_003594247.1 KEGG: ccs:CCNA_01120 hypothetical protein YP_003594248.1 KEGG: ccs:CCNA_01119 hypothetical protein YP_003594249.1 PFAM: protein of unknown function DUF1491; KEGG: cak:Caul_1240 hypothetical protein YP_003594250.1 KEGG: ccs:CCNA_01117 hypothetical protein YP_003594251.1 KEGG: ccs:CCNA_01116 histidine protein kinase DivJ; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003594252.1 KEGG: ccs:CCNA_01115 two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003594253.1 PFAM: Fe-S metabolism associated SufE; KEGG: ccs:CCNA_01114 SufE protein YP_003594254.1 PFAM: Protein of unknown function DUF2383; KEGG: cak:Caul_1205 hypothetical protein YP_003594255.1 SMART: regulatory protein ArsR; KEGG: cak:Caul_1369 ArsR family transcriptional regulator YP_003594256.1 KEGG: ccs:CCNA_01121 hypothetical protein YP_003594257.1 KEGG: cak:Caul_2985 hypothetical protein YP_003594258.1 KEGG: cak:Caul_2986 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003594259.1 TIGRFAM: phospholipase C, phosphocholine-specific; KEGG: cak:Caul_2987 phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_003594260.1 KEGG: cak:Caul_2988 hypothetical protein YP_003594261.1 TIGRFAM: phosphonoacetaldehyde hydrolase; KEGG: cak:Caul_2989 phosphonoacetaldehyde hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003594262.1 KEGG: cak:Caul_2990 FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase YP_003594263.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: cak:Caul_2991 aspartyl/asparaginyl beta-hydroxylase YP_003594264.1 PFAM: TPR repeat-containing protein; KEGG: cak:Caul_2992 sulfotransferase YP_003594265.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: cak:Caul_2993 hypothetical protein YP_003594266.1 KEGG: cak:Caul_2994 hypothetical protein YP_003594267.1 KEGG: cak:Caul_2995 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594268.1 KEGG: swi:Swit_5353 multi-sensor hybrid histidine kinase; PFAM: CHASE3 domain protein; GAF domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; response regulator receiver YP_003594269.1 PFAM: MCP methyltransferase CheR-type; KEGG: swi:Swit_5354 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_003594270.1 KEGG: swi:Swit_5355 chemotaxis protein CheB; PFAM: chemotaxis protein CheB YP_003594271.1 KEGG: swi:Swit_5356 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_003594272.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_1370 short-chain dehydrogenase/reductase SDR YP_003594273.1 KEGG: ccs:CCNA_01112 hypothetical protein YP_003594274.1 KEGG: ccs:CCNA_01111 DnaA-related protein; PFAM: Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain YP_003594275.1 KEGG: rce:RC1_3751 hypothetical protein YP_003594276.1 PFAM: protein of unknown function DUF885; KEGG: ccs:CCNA_01109 conserved cytosolic protein YP_003594277.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_01108 nucleoside-diphosphate-sugar epimerase YP_003594278.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_01105 alpha/beta hydrolase family protein YP_003594279.1 PFAM: glycosyl transferase group 1; KEGG: ccs:CCNA_01104 glycosyltransferase YP_003594280.1 PFAM: glycosyl transferase family 9; KEGG: cak:Caul_1197 glycosyl transferase family protein YP_003594281.1 KEGG: ccs:CCNA_01102 hypothetical protein; manually curated; PFAM: protein of unknown function DUF161 YP_003594282.1 KEGG: cak:Caul_1196 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_003594283.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ccs:CCNA_01100 acylamino-acid-releasing enzyme YP_003594284.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01099 tetracycline resistance protein YP_003594285.1 KEGG: ccs:CCNA_01098 LSU ribosomal protein L35P; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_003594286.1 KEGG: ccs:CCNA_01097 LSU ribosomal protein L20P; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_003594287.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; KEGG: ccs:CCNA_01096 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003594288.1 manually curated; KEGG: ccs:CCNA_01094 hypothetical protein YP_003594289.1 KEGG: ccs:CCNA_01093 hypothetical protein YP_003594290.1 KEGG: ccs:CCNA_01092 hypothetical protein YP_003594291.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: ccs:CCNA_01091 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_003594292.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_01088 hypothetical protein YP_003594293.1 PFAM: conserved hypothetical protein; KEGG: cak:Caul_1182 hypothetical protein YP_003594294.1 KEGG: ccs:CCNA_01086 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_003594295.1 KEGG: mdi:METDI2603 AAA ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003594296.1 KEGG: mdi:METDI2604 hypothetical protein YP_003594297.1 KEGG: ccs:CCNA_01082 hypothetical protein YP_003594298.1 KEGG: pzu:PHZ_c2164 hypothetical protein YP_003594299.1 KEGG: ccs:CCNA_01081 hypothetical protein YP_003594300.1 KEGG: ccs:CCNA_01080 hypothetical protein YP_003594301.1 KEGG: ccs:CCNA_01079 hypothetical protein YP_003594302.1 PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_1177 glutathione S-transferase YP_003594303.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: cak:Caul_1275 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin YP_003594304.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: cak:Caul_1274 ErfK/YbiS/YcfS/YnhG family protein YP_003594305.1 KEGG: ccs:CCNA_01076 beta/gamma crystallin domain protein; PFAM: beta and gamma crystallin; SMART: beta and gamma crystallin YP_003594306.1 PFAM: Entericidin EcnAB; KEGG: ccs:CCNA_01074 entericidin B-like protein YP_003594307.1 PFAM: protein of unknown function DUF983; KEGG: ccs:CCNA_01073 zinc-finger protein YP_003594308.1 KEGG: ccs:CCNA_01072 hypothetical protein YP_003594309.1 PFAM: General substrate transporter; KEGG: ccs:CCNA_01071 alpha-ketoglutarate permease YP_003594310.1 PFAM: protein of unknown function DUF599; KEGG: ccs:CCNA_01070 hypothetical protein YP_003594311.1 PFAM: Methyltransferase regulatory domain, predicted; KEGG: ccs:CCNA_01069 methyltransferase YP_003594312.1 PFAM: glycosyl transferase group 1; KEGG: ccr:CC_1016 LpsE protein YP_003594313.1 KEGG: ccs:CCNA_01067 type I secretion outer membrane protein RsaFa; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_003594314.1 PFAM: glycosyl transferase group 1; KEGG: ccs:CCNA_01066 glycosyltransferase YP_003594315.1 PFAM: glycosyl transferase group 1; KEGG: ccs:CCNA_01065 glycosyltransferase YP_003594316.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ccs:CCNA_01064 perosamine synthetase YP_003594317.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: ccs:CCNA_01063 UDP-perosamine 4-acetyl transferase YP_003594318.1 KEGG: ccs:CCNA_01061 type I secretion adaptor protein RsaE; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein hemolysin D YP_003594319.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; KEGG: ccs:CCNA_01060 type I protein secretion ATP-binding protein RsaD; SMART: AAA ATPase YP_003594320.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sit:TM1040_3840 hemolysin-type calcium-binding region YP_003594321.1 KEGG: ccs:CCNA_01058 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003594322.1 KEGG: ccs:CCNA_01057 STS1 YP_003594323.1 TIGRFAM: methyltransferase FkbM family; KEGG: ccs:CCNA_01056 methyltransferase YP_003594324.1 PFAM: glycosyl transferase group 1; KEGG: ccs:CCNA_01055 glyscosyl transferase YP_003594325.1 PFAM: tryptophan halogenase; KEGG: ccs:CCNA_01054 tryptophan halogenase YP_003594326.1 SMART: transcription factor jumonji jmjC domain protein; KEGG: ccr:CC_1001 Pass1-related protein YP_003594327.1 PFAM: SapC family protein; KEGG: ccs:CCNA_01052 SapC family protein YP_003594328.1 KEGG: ccs:CCNA_01051 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594329.1 PFAM: glycosyl hydrolase family 2 sugar binding; glycosyl hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycosyl hydrolase family 2 TIM barrel; KEGG: cak:Caul_4083 glycosyl hydrolase YP_003594330.1 KEGG: cak:Caul_4082 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594331.1 KEGG: xac:XAC1309 arabinogalactan endo-1,4-beta-galactosidase; PFAM: glycosyl hydrolase 53 domain protein YP_003594332.1 KEGG: cak:Caul_3925 hypothetical protein YP_003594333.1 KEGG: sdy:SDY_3684 hypothetical protein YP_003594334.1 KEGG: rlg:Rleg_2944 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp YP_003594335.1 PFAM: regulatory protein Crp; KEGG: mpo:Mpop_3832 transcriptional regulator, Crp/Fnr family YP_003594336.1 PFAM: amine oxidase; KEGG: pzu:PHZ_c3058 amine oxidase, flavin-containing protein YP_003594337.1 PFAM: protein of unknown function DUF1365; KEGG: mlo:mll8086 hypothetical protein YP_003594338.1 KEGG: ccs:CCNA_00685 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_003594339.1 TIGRFAM: anti-sigma factor, , ChrR family; KEGG: ccs:CCNA_00684 transcriptional activator ChrR YP_003594340.1 KEGG: met:M446_4660 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003594341.1 PFAM: FAD dependent oxidoreductase; KEGG: mrd:Mrad2831_2179 glycerol-3-phosphate dehydrogenase YP_003594342.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nar:Saro_3668 TonB-dependent receptor YP_003594343.1 KEGG: cak:Caul_2402 hypothetical protein YP_003594344.1 PFAM: glycosyl hydrolase family 31; KEGG: lch:Lcho_3217 alpha-glucosidase YP_003594345.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_3357 major facilitator transporter YP_003594346.1 PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; KEGG: ccs:CCNA_02909 tetratricopeptide repeat (TPR) protein YP_003594347.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_02910 TonB-dependent receptor YP_003594348.1 SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: ccs:CCNA_02912 prolyl 4-hydroxylase, alpha subunit YP_003594349.1 KEGG: ccs:CCNA_02913 hypothetical protein YP_003594350.1 KEGG: swi:Swit_0797 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003594351.1 KEGG: swi:Swit_0796 hypothetical protein YP_003594352.1 KEGG: mst:Msp_0629 translation initiation factor IF-2 YP_003594353.1 KEGG: bbr:BB4740 hypothetical protein YP_003594354.1 KEGG: rsp:RSP_3427 hypothetical protein YP_003594355.1 KEGG: rlg:Rleg_5448 hypothetical protein YP_003594356.1 KEGG: bra:BRADO1254 hypothetical protein; PFAM: peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase YP_003594357.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: ccs:CCNA_01046 peptide methionine sulfoxide reductase MsrA; PFAM: Methionine sulfoxide reductase A YP_003594358.1 KEGG: cak:Caul_1165 hypothetical protein YP_003594359.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_01044 transcriptional regulator YP_003594360.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_01042 TonB-dependent receptor YP_003594361.1 PFAM: major facilitator superfamily MFS_1; KEGG: cak:Caul_2075 major facilitator transporter YP_003594362.1 KEGG: cak:Caul_2733 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_003594363.1 KEGG: ccs:CCNA_01040 beta-xylosidase/alpha-L-arabinofuranosidase; PFAM: glycosyl hydrolase family 43 YP_003594364.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01039 hexuronate transporter YP_003594365.1 PFAM: protein of unknown function DUF1452; KEGG: cak:Caul_1265 hypothetical protein YP_003594366.1 KEGG: TSSC4; tumor suppressing subtransferable candidate 4 YP_003594367.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_01038 glyoxalase family protein YP_003594368.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ccs:CCNA_00566 starvation sensing protein RspA YP_003594369.1 KEGG: ccs:CCNA_01037 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003594370.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: ccs:CCNA_01036 hypothetical protein YP_003594371.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: ccs:CCNA_01034 TonB-dependent outer membrane receptor YP_003594372.1 PFAM: FecR protein; KEGG: ccs:CCNA_01033 FecR family protein YP_003594373.1 KEGG: ccs:CCNA_01032 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003594374.1 PFAM: General substrate transporter; KEGG: ccs:CCNA_01031 transporter YP_003594375.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ccs:CCNA_01030 peptidyl-prolyl cis-trans isomerase YP_003594376.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ccs:CCNA_01018 D-galactose 1-dehydrogenase YP_003594377.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_01017 acyl-CoA synthetase YP_003594378.1 TIGRFAM: copper-resistance protein, CopA family; KEGG: ccs:CCNA_01015 multicopper oxidase PcoA; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2 YP_003594379.1 KEGG: ccs:CCNA_01014 regulatory protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_003594380.1 KEGG: tcu:Tcur_4274 pantothenate kinase YP_003594381.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: cak:Caul_0078 glutathione-dependent formaldehyde-activating GFA YP_003594382.1 PFAM: Domain of unknown function DUF1993; KEGG: cak:Caul_2185 hypothetical protein YP_003594383.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: ccs:CCNA_01013 histidine utilization repressor; SMART: regulatory protein GntR HTH YP_003594384.1 TIGRFAM: histidine ammonia-lyase; KEGG: ccs:CCNA_01010 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_003594385.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: cak:Caul_1376 substrate-binding region of ABC-type glycine betaine transport system YP_003594386.1 KEGG: cak:Caul_1375 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003594387.1 manually curated; KEGG: ccs:CCNA_01007 hypothetical protein YP_003594388.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ccs:CCNA_03625 transcriptional regulator, LysR family protein YP_003594389.1 PFAM: protein of unknown function DUF897; KEGG: ccs:CCNA_03624 sodium bicarbonate cotransporter YP_003594390.1 KEGG: ccs:CCNA_01006 flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_003594391.1 KEGG: ccs:CCNA_01005 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003594392.1 KEGG: ccs:CCNA_01004 flagellar basal-body rod protein FlgB YP_003594393.1 KEGG: ccs:CCNA_01003 flagellar biosynthesis protein FliO YP_003594394.1 KEGG: ccs:CCNA_01002 flagellar biosyntheis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_003594395.1 PFAM: PfkB domain protein; KEGG: ccs:CCNA_01001 ribokinase YP_003594396.1 PFAM: protein of unknown function DUF1457; KEGG: ccs:CCNA_00999 hypothetical protein YP_003594397.1 PFAM: ROSMUCR transcriptional regulator; KEGG: ccs:CCNA_00998 transcriptional regulator YP_003594398.1 PFAM: Protein of unknown function DUF2336; KEGG: ccs:CCNA_00997 hypothetical protein YP_003594399.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_00996 enoyl-CoA hydratase YP_003594400.1 PFAM: cytochrome P450; KEGG: ccs:CCNA_00995 cytochrome P450 yjib YP_003594401.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: ccs:CCNA_00994 oxidoreductase, GMC family YP_003594402.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_00993 long-chain-fatty-acid--CoA ligase YP_003594403.1 KEGG: rso:RS00399 manganese transport protein MntH; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_003594404.1 KEGG: ccs:CCNA_00991 nodulation protein N; PFAM: MaoC domain protein dehydratase YP_003594405.1 PFAM: protein of unknown function DUF1272; KEGG: bja:blr0341 hypothetical protein YP_003594406.1 PFAM: OsmC family protein; KEGG: ccs:CCNA_00990 general stress protein 17O YP_003594407.1 PFAM: CsbD family protein; KEGG: cak:Caul_1345 CsbD family protein YP_003594408.1 KEGG: cak:Caul_1344 hypothetical protein YP_003594409.1 KEGG: ccs:CCNA_00985 protease II; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein YP_003594410.1 KEGG: ccs:CCNA_00984 phosphinothricin N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003594411.1 KEGG: ccs:CCNA_00983 hybrid sensor histidine kinase/receiver protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; major intrinsic protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003594412.1 PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator YP_003594413.1 KEGG: ccs:CCNA_00976 signal peptide peptidase; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_003594414.1 PFAM: sulfotransferase; KEGG: nar:Saro_0167 sulfotransferase YP_003594415.1 PFAM: TonB-dependent receptor plug; Cna B domain protein; KEGG: cak:Caul_1319 TonB-dependent receptor plug YP_003594416.1 KEGG: ccs:CCNA_00973 hypothetical protein; manually curated; PFAM: protein of unknown function DUF442 YP_003594417.1 KEGG: ccs:CCNA_00972 hypothetical protein YP_003594418.1 KEGG: ccs:CCNA_00971 hydroxyacylglutathione hydrolase YP_003594419.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: ccs:CCNA_00966 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like YP_003594420.1 KEGG: ccs:CCNA_00965 chaperone protein DnaJ; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003594421.1 KEGG: ccs:CCNA_00963 organic hydroperoxide resistance protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_003594422.1 KEGG: ccs:CCNA_00962 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003594423.1 KEGG: ccs:CCNA_00961 hypothetical protein YP_003594424.1 KEGG: cak:Caul_1018 hypothetical protein YP_003594425.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_00959 transcriptional regulator, TetR family YP_003594426.1 KEGG: ccs:CCNA_00958 hypothetical protein YP_003594427.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rhi:NGR_c27350 NADP-dependent alcohol dehydrogenase C YP_003594428.1 KEGG: ccs:CCNA_00956 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_003594429.1 KEGG: ccs:CCNA_00954 AAA-family response regulator FlbD; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: AAA ATPase; response regulator receiver YP_003594430.1 KEGG: ccs:CCNA_00953 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_003594431.1 KEGG: ccs:CCNA_00952 flagellar assembly protein FlbE/FliH YP_003594432.1 KEGG: ccs:CCNA_00951 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_003594433.1 KEGG: ccs:CCNA_00950 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_003594434.1 PFAM: protein of unknown function DUF1153; KEGG: cak:Caul_1011 hypothetical protein YP_003594435.1 KEGG: ccs:CCNA_00947 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body FlaE domain protein YP_003594436.1 PFAM: flagellar hook capping protein; KEGG: ccs:CCNA_00946 basal-body rod modification protein FlgD YP_003594437.1 PFAM: flagellar hook-length control protein; KEGG: cak:Caul_1008 flagellar hook-length control protein YP_003594438.1 KEGG: ccs:CCNA_00943 flagellar hook-associated protein FlaN; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003594439.1 KEGG: ccs:CCNA_00942 flagellar hook-associated protein FlgL YP_003594440.1 KEGG: ccs:CCNA_00941 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like YP_003594441.1 KEGG: pzu:PHZ_c2900 hypothetical protein YP_003594442.1 KEGG: hypothetical protein YP_003594443.1 PFAM: helix-turn-helix HxlR type; KEGG: ccs:CCNA_00939 transcriptional regulator, MarR family YP_003594444.1 KEGG: ccs:CCNA_00938 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003594445.1 KEGG: cak:Caul_0999 hypothetical protein YP_003594446.1 PFAM: peptidase M28; KEGG: ccs:CCNA_00933 hypothetical protein YP_003594447.1 PFAM: helix-turn-helix HxlR type; KEGG: cak:Caul_3459 HxlR family transcriptional regulator YP_003594448.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_3460 short-chain dehydrogenase/reductase SDR YP_003594449.1 PFAM: OmpA/MotB domain protein; KEGG: cak:Caul_0992 OmpA/MotB domain-containing protein YP_003594450.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_0998 LysR family transcriptional regulator YP_003594451.1 KEGG: cak:Caul_0997 beta-lactamase; PFAM: beta-lactamase YP_003594452.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_4436 short-chain dehydrogenase/reductase SDR YP_003594453.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_4437 TetR family transcriptional regulator YP_003594454.1 KEGG: ccs:CCNA_00923 hypothetical protein YP_003594455.1 PFAM: regulatory protein TetR; KEGG: pzu:PHZ_c0609 transcriptional regulator, TetR family YP_003594456.1 KEGG: pzu:PHZ_c0608 hypothetical protein YP_003594457.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: ccs:CCNA_00922 ClpB protein; SMART: AAA ATPase YP_003594458.1 PFAM: peptidase M48 Ste24p; KEGG: ccs:CCNA_00921 zinc metalloprotease YP_003594459.1 KEGG: sal:Sala_0939 hypothetical protein YP_003594460.1 KEGG: ccs:CCNA_00920 cytosolic protein YP_003594461.1 KEGG: ccs:CCNA_00918 peptide release factor-glutamine N5-methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: Methyltransferase type 11 YP_003594462.1 KEGG: ccs:CCNA_00917 antitoxin protein ParD-1; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156 YP_003594463.1 PFAM: plasmid stabilization system; KEGG: bmj:BMULJ_04276 plasmid maintenance killer protein of plasmid stabilization addiction module YP_003594464.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: ccs:CCNA_00915 xylene monooxygenase electron transfer component YP_003594465.1 KEGG: cak:Caul_0983 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_003594466.1 PFAM: Methyltransferase type 11; KEGG: pmn:PMN2A_0954 hypothetical protein YP_003594467.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00914 acetyltransferase YP_003594468.1 KEGG: ccs:CCNA_00913 hypothetical protein YP_003594469.1 KEGG: cak:Caul_0975 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003594470.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cak:Caul_0976 lysine exporter protein LysE/YggA YP_003594471.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2548 TonB-dependent receptor YP_003594472.1 KEGG: ccs:CCNA_03006 quinolinate synthetase A; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_003594473.1 KEGG: ccs:CCNA_03007 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003594474.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: ccs:CCNA_03009 nicotinate-nucleotide pyrophosphorylase (carboxylating); PFAM: Quinolinate phosphoribosyl transferase YP_003594475.1 PFAM: protein of unknown function DUF1123; KEGG: ccs:CCNA_03010 hypothetical protein YP_003594476.1 KEGG: ccs:CCNA_03028 prephenate dehydratase; PFAM: prephenate dehydratase YP_003594477.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ccs:CCNA_03029 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_003594478.1 PFAM: cytochrome C class I; KEGG: ccs:CCNA_03030 cytochrome C YP_003594479.1 KEGG: cak:Caul_4583 thiol-disulfide isomerase YP_003594480.1 PFAM: alpha/beta hydrolase fold; KEGG: xac:XAC3371 proline imino-peptidase YP_003594481.1 KEGG: hypothetical protein YP_003594482.1 PFAM: NLP/P60 protein; KEGG: ccs:CCNA_03031 gamma-D-glutamyl-meso-diaminopimelate peptidase YP_003594483.1 KEGG: ccs:CCNA_03032 cytosol aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_003594484.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; KEGG: ccs:CCNA_03033 tetratricopeptide repeat family protein YP_003594485.1 KEGG: xac:XAC2964 hypothetical protein YP_003594486.1 PFAM: Type II secretion system F domain; KEGG: ccs:CCNA_03035 tyrosine phenol-lyase YP_003594487.1 PFAM: Type II secretion system F domain; KEGG: ccs:CCNA_03036 TadB-related pilus assembly protein YP_003594488.1 PFAM: type II secretion system protein E; KEGG: ccs:CCNA_03037 pilus assembly ATPase CpaF YP_003594489.1 KEGG: ccs:CCNA_03038 pilus assembly ATPase CpaE YP_003594490.1 KEGG: ccs:CCNA_03039 pilus assembly protein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD-related YP_003594491.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: ccs:CCNA_03040 outer membrane pilus secretion channel CpaC YP_003594492.1 KEGG: ccs:CCNA_03041 pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein YP_003594493.1 PFAM: peptidase A24A prepilin type IV; KEGG: ccs:CCNA_03042 pilus assembly prepilin peptidase CpaA YP_003594494.1 KEGG: dps:DP1538 pilus assembly protein pilin subunit YP_003594495.1 PFAM: Flp/Fap pilin component; KEGG: ccs:CCNA_03043 type IV pilin protein PilA YP_003594496.1 KEGG: ccs:CCNA_03044 CpaC-related secretion pathway protein YP_003594497.1 PFAM: TadE family protein; KEGG: ccs:CCNA_03045 TadG-related pilus assembly protein YP_003594498.1 PFAM: TadE family protein; KEGG: ccs:CCNA_03046 TadE-related pilus assembly protein YP_003594499.1 PFAM: aminotransferase class IV; KEGG: ccs:CCNA_03047 4-amino-4-deoxychorismate lyase YP_003594500.1 TIGRFAM: para-aminobenzoate synthase component I; KEGG: ccs:CCNA_03048 para-aminobenzoate synthetase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003594501.1 KEGG: ccs:CCNA_03049 transporter, MFS superfamily YP_003594502.1 KEGG: ccs:CCNA_03050 protein tyrosine phosphatase YP_003594503.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ccs:CCNA_03053 dioxygenase YP_003594504.1 PFAM: ThiJ/PfpI domain protein; KEGG: ccs:CCNA_03055 transcriptional regulator, AraC family YP_003594505.1 KEGG: sbm:Shew185_3418 hypothetical protein YP_003594506.1 KEGG: hypothetical protein YP_003594507.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_03061 3-oxoacyl-(acyl-carrier protein) reductase YP_003594508.1 PFAM: cell wall hydrolase SleB; KEGG: ccr:CC_2967 hypothetical protein YP_003594509.1 KEGG: ccs:CCNA_03063 hypothetical protein YP_003594510.1 PFAM: transcriptional regulator PadR family protein; KEGG: ccs:CCNA_03064 transcriptional regulator, PadR family YP_003594511.1 PFAM: Protein of unknown function DUF1810; KEGG: mpo:Mpop_0685 protein of unknown function DUF1810 YP_003594512.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: cak:Caul_2461 alcohol dehydrogenase YP_003594513.1 KEGG: ccs:CCNA_03065 cytochrome C YP_003594514.1 KEGG: bxe:Bxe_B0221 GAF sensor hybrid histidine kinase; PFAM: HWE histidine kinase; MASE1 domain protein; GAF domain protein; SMART: GAF domain protein YP_003594515.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: ccs:CCNA_03076 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_003594516.1 KEGG: ppw:PputW619_3545 amino acid adenylation domain-containing protein YP_003594517.1 PFAM: protein of unknown function DUF1697; KEGG: cak:Caul_2927 hypothetical protein YP_003594518.1 PFAM: protein of unknown function DUF450; KEGG: cak:Caul_0839 hypothetical protein YP_003594519.1 KEGG: scl:sce8846 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003594520.1 KEGG: sus:Acid_1918 activator of HSP90 ATPase 1 family protein YP_003594521.1 KEGG: cak:Caul_1090 hypothetical protein YP_003594522.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pzu:PHZ_c3043 thioredoxin reductase YP_003594523.1 KEGG: mea:Mex_2p0008 beta-ketoacyl synthase YP_003594524.1 KEGG: zmn:Za10_0232 cellulase; PFAM: glycosyl hydrolase family 8 YP_003594525.1 KEGG: ent:Ent638_3937 hypothetical protein YP_003594526.1 KEGG: avn:Avin_05080 cellulose synthase subunit C; PFAM: cellulose synthase operon C domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; RNA-processing protein HAT helix repeating-containing protein YP_003594527.1 KEGG: avn:Avin_05090 cellulose synthase subunit AB; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: Cellulose synthase BcsB; glycosyl transferase family 2; type IV pilus assembly PilZ YP_003594528.1 KEGG: avn:Avin_05100 ATPase; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cobyrinic acid ac-diamide synthase YP_003594529.1 KEGG: nar:Saro_2318 ribonuclease E YP_003594530.1 PFAM: Hemolysin-type calcium-binding region; KEGG: swi:Swit_4004 hemolysin-type calcium-binding region YP_003594531.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sal:Sala_1228 TonB-dependent receptor YP_003594532.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: cak:Caul_0738 2-nitropropane dioxygenase NPD YP_003594533.1 PFAM: protein of unknown function DUF1311; KEGG: ccs:CCNA_03086 hypothetical protein YP_003594534.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: ccs:CCNA_03090 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_003594535.1 KEGG: ccs:CCNA_03091 hypothetical protein YP_003594536.1 PFAM: cytochrome P450; KEGG: ccs:CCNA_03092 cytochrome P450 IVA5 YP_003594537.1 PFAM: OsmC family protein; KEGG: ccs:CCNA_03093 OsmC-like protein YP_003594538.1 PFAM: HpcH/HpaI aldolase; KEGG: ccs:CCNA_03094 malyl-CoA lyase YP_003594539.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ccs:CCNA_03095 mechanosensitive ion channel YP_003594540.1 KEGG: mem:Memar_2282 hypothetical protein YP_003594541.1 PFAM: aldo/keto reductase; KEGG: cak:Caul_0728 aldo/keto reductase YP_003594542.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: cak:Caul_0726 3-demethylubiquinone-9 3-methyltransferase YP_003594543.1 PFAM: PhnA protein; KEGG: ccs:CCNA_03100 PhnA protein YP_003594544.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ccs:CCNA_03101 integrase/recombinase (XerD/RipX family) YP_003594545.1 KEGG: ccs:CCNA_03102 hypothetical protein YP_003594546.1 KEGG: ccs:CCNA_03103 shikimate kinase; PFAM: shikimate kinase YP_003594547.1 KEGG: ccs:CCNA_03104 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003594548.1 KEGG: cak:Caul_3598 hypothetical protein YP_003594549.1 KEGG: cak:Caul_3597 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003594550.1 KEGG: ccs:CCNA_01050 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003594551.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: ccs:CCNA_03112 magnesium and cobalt efflux protein CorB YP_003594552.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; GAF domain protein; KEGG: mrd:Mrad2831_3331 signal transduction histidine kinase; SMART: GAF domain protein; PAC repeat-containing protein YP_003594553.1 KEGG: ccs:CCNA_03110 two-component receiver domain protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003594554.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03108 TonB-dependent outer membrane receptor YP_003594555.1 KEGG: ccs:CCNA_03107 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_003594556.1 PFAM: BolA family protein; KEGG: ccs:CCNA_03106 BolA protein YP_003594557.1 KEGG: ccs:CCNA_03105 molecular chaperones (DnaJ family); PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003594558.1 KEGG: smt:Smal_0386 hypothetical protein YP_003594559.1 KEGG: ccr:CC_3018 hypothetical protein YP_003594560.1 KEGG: ccs:CCNA_03113 membrane-associated phospholipid phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003594561.1 KEGG: cak:Caul_0712 secreted protein YP_003594562.1 TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: ccs:CCNA_03115 cobaltochelatase CobS subunit; PFAM: ATPase associated with various cellular activities AAA_5 YP_003594563.1 KEGG: cak:Caul_0709 hypothetical protein YP_003594564.1 KEGG: cak:Caul_4259 hypothetical protein YP_003594565.1 KEGG: ccs:CCNA_03118 hypothetical protein YP_003594566.1 KEGG: ccs:CCNA_03119 hypothetical protein YP_003594567.1 KEGG: ccs:CCNA_03120 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_003594568.1 KEGG: mmr:Mmar10_1551 hypothetical protein YP_003594569.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ccs:CCNA_03124 NAD/mycothiol-dependent formaldehyde dehydrogenase YP_003594570.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ccs:CCNA_03127 aminoacyl-histidine dipeptidase YP_003594571.1 PFAM: Methyltransferase type 12; KEGG: mpa:MAP1004 hypothetical protein YP_003594572.1 PFAM: Peptidase M23; KEGG: ccs:CCNA_03129 peptidoglycan-specific endopeptidase, M23 family YP_003594573.1 KEGG: ccs:CCNA_03130 cell cycle response regulator CtrA; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003594574.1 PFAM: LytTr DNA-binding region; KEGG: ccs:CCNA_03131 LytR/AlgR-family transcriptional regulator YP_003594575.1 KEGG: ccs:CCNA_03134 predicted dienelactone hydrolase YP_003594576.1 SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family; KEGG: ccs:CCNA_03135 flagellum-specific ATP synthase FliL; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003594577.1 KEGG: ccs:CCNA_03136 flagellar export protein FliJ YP_003594578.1 KEGG: amr:AM1_1228 hypothetical protein YP_003594579.1 KEGG: hoh:Hoch_5519 serine/threonine protein kinase YP_003594580.1 KEGG: cak:Caul_4155 hypothetical protein YP_003594581.1 KEGG: cak:Caul_3732 CopY family transcriptional regulator YP_003594582.1 PFAM: peptidase M56 BlaR1; KEGG: cak:Caul_3733 peptidase M56 BlaR1 YP_003594583.1 KEGG: ccs:CCNA_03142 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 non-essential domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_003594584.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; KEGG: ccs:CCNA_03143 PAS-family sensor histidine kinase; SMART: PAC repeat-containing protein; PAS domain containing protein YP_003594585.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; KEGG: ccs:CCNA_03144 DNA primase; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003594586.1 KEGG: pzu:PHZ_c3365 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_003594587.1 KEGG: ccs:CCNA_03146 M61 glycyl aminopeptidase; PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003594588.1 KEGG: ccs:CCNA_03147 hypothetical protein YP_003594589.1 PFAM: glycosyl hydrolase family 3 domain protein; KEGG: ccs:CCNA_03149 beta-glucosidase/beta-xylosidase YP_003594590.1 KEGG: ccs:CCNA_03152 hypothetical protein YP_003594591.1 PFAM: Protein of unknown function DUF2257; KEGG: ccs:CCNA_03153 hypothetical protein YP_003594592.1 PFAM: PepSY-associated TM helix domain protein; KEGG: ccs:CCNA_03155 transporter YP_003594593.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_03156 hypothetical protein YP_003594594.1 PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: ccs:CCNA_03157 hypothetical protein YP_003594595.1 PFAM: ApbE family lipoprotein; KEGG: ccs:CCNA_03158 iron-sulfur cluster assembly/repair protein ApbE YP_003594596.1 PFAM: flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ccs:CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component YP_003594597.1 KEGG: ccs:CCNA_03160 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003594598.1 manually curated; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ccs:CCNA_03161 transcriptional regulator XylR; SMART: regulatory protein LacI YP_003594599.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ccr:CC_0823 hypothetical protein YP_003594600.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00864 xylose dehydrogenase XylB YP_003594601.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: ccs:CCNA_00863 xylonolactonase XylC YP_003594602.1 KEGG: ccr:CC_0819 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003594603.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00859 acetyltransferase, GNAT family YP_003594604.1 PFAM: Glutathione S-transferase domain; KEGG: sal:Sala_1100 glutathione S-transferase YghU YP_003594605.1 KEGG: ccs:CCNA_00857 glucose/fructose transport protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter YP_003594606.1 PFAM: glycosyl hydrolase family 43; KEGG: ccs:CCNA_00856 beta-xylosidase YP_003594607.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: ccs:CCNA_03459 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein YP_003594608.1 KEGG: ccs:CCNA_00854 metallo-beta-lactamase protein YP_003594609.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_00853 3-isopropylmalate dehydrogenase YP_003594610.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_00852 transcriptional regulator YP_003594611.1 KEGG: ccs:CCNA_00851 periplasmic multidrug efflux lipoprotein precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003594612.1 KEGG: ccs:CCNA_00849 outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003594614.1 KEGG: cak:Caul_1045 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator, AsnC-type YP_003594615.1 KEGG: ccs:CCNA_00843 mannanase precursor frameshifted variant YP_003594616.1 KEGG: scl:sce0857 hypothetical protein; PFAM: peptidase S41; SMART: peptidase S41 YP_003594617.1 KEGG: ccs:CCNA_00841 para-nitrobenzyl esterase; PFAM: Carboxylesterase type B YP_003594618.1 PFAM: flagellin domain protein; KEGG: cak:Caul_3646 flagellin domain-containing protein YP_003594619.1 KEGG: ccs:CCNA_00831 alpha-glucosidase; PFAM: glycosyl hydrolase family 31; PA14 domain protein; SMART: PA14 domain protein YP_003594620.1 KEGG: ccs:CCNA_00826 2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase YP_003594621.1 PFAM: KDPG and KHG aldolase; KEGG: cak:Caul_1286 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_003594622.1 KEGG: cak:Caul_1285 SSS family solute/sodium (Na+) symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003594623.1 KEGG: ccs:CCNA_00824 galactonate operon transcriptional repressor; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003594624.1 KEGG: ccs:CCNA_00822 hypothetical protein YP_003594625.1 KEGG: ccs:CCNA_00821 hypothetical protein YP_003594626.1 KEGG: ccs:CCNA_00820 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase YP_003594627.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_00818 glutathione S-transferase YP_003594628.1 PFAM: acriflavin resistance protein; KEGG: cak:Caul_1280 acriflavin resistance protein YP_003594629.1 PFAM: lipolytic protein G-D-S-L family; KEGG: cak:Caul_1278 GDSL family lipase YP_003594630.1 PFAM: NHL repeat containing protein; KEGG: ccs:CCNA_00817 L-sorbosone dehydrogenase YP_003594631.1 PFAM: Carotenoid oxygenase; KEGG: ccs:CCNA_00815 lignostilbene-alpha,beta-dioxygenase YP_003594632.1 KEGG: ccs:CCNA_00814 hypothetical protein YP_003594633.1 PFAM: flavin-containing monooxygenase FMO; KEGG: ccs:CCNA_00813 dimethylaniline monooxygenase (N-oxide forming) YP_003594634.1 PFAM: Protein of unknown function DUF2164; KEGG: ccs:CCNA_00812 cytosolic protein YP_003594635.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_00811 transcriptional regulator, TetR family YP_003594636.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: ccs:CCNA_00810 acetyl esterase YP_003594637.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ccs:CCNA_00809 quinone oxidoreductase YP_003594638.1 KEGG: ccs:CCNA_00808 LSU ribosomal protein L34P; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_003594639.1 KEGG: ccs:CCNA_00807 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_003594640.1 KEGG: ccs:CCNA_00806 inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein YP_003594641.1 KEGG: ccs:CCNA_00805 GTP-binding protein YihA; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_003594642.1 PFAM: protein of unknown function DUF437; KEGG: ccs:CCNA_00804 hypothetical protein YP_003594643.1 KEGG: ccs:CCNA_00803 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_003594644.1 KEGG: cak:Caul_0636 cyd operon protein YbgT; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein YP_003594645.1 KEGG: ccs:CCNA_00801 cytochrome bd-type quinol oxidase, subunit 2 CydB; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003594646.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: ccs:CCNA_00800 cytochrome bd-type quinol oxidase, subunit 1 CydA YP_003594647.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ccs:CCNA_00799 ABC transporter, ATP-binding protein CydD; SMART: AAA ATPase YP_003594648.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: ccs:CCNA_00798 ABC transporter, ATP-binding protein CydC; SMART: AAA ATPase YP_003594650.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: ccs:CCNA_00796 oxygen sensory histidine kinase FixL; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein YP_003594651.1 KEGG: ccs:CCNA_00795 two-component response regulator FixJ; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003594652.1 KEGG: ccs:CCNA_00790 hypoxia negative feedback regulator FixT YP_003594653.1 KEGG: ccs:CCNA_00789 hypoxia transcriptional regulator FixK; PFAM: regulatory protein Crp; cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_003594654.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_00788 transporter, major facilitator superfamily YP_003594655.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cak:Caul_0867 flagellar motor protein MotA YP_003594656.1 KEGG: mpt:Mpe_A2566 lipoprotein YP_003594657.1 KEGG: ccs:CCNA_00785 tRNA (5-aminomethyl-2-thiouridylate) methyltransferase/tRNA (5-carboxymethylaminomethyl-2-thiouridylate) oxidase TrmC; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase YP_003594658.1 PFAM: OmpA/MotB domain protein; surface antigen msp4 family protein; KEGG: ccs:CCNA_00784 heat resistant agglutinin YP_003594659.1 PFAM: Peptidase M10 serralysin ; peptidase M10A and M12B matrixin and adamalysin; Hemolysin-type calcium-binding region; KEGG: ccs:CCNA_00783 secreted protease precursor SapA; SMART: peptidase metallopeptidase YP_003594660.1 KEGG: cak:Caul_5196 hypothetical protein YP_003594661.1 KEGG: fre:Franean1_4838 beta-ketoacyl synthase YP_003594663.1 KEGG: ccs:CCNA_00781 two-component receiver protein CpdR; PFAM: response regulator receiver; SMART: response regulator receiver YP_003594664.1 PFAM: N-formylglutamate amidohydrolase; KEGG: ccs:CCNA_00780 N-formylglutamate deformylase YP_003594665.1 KEGG: ccs:CCNA_00778 GTP-binding protein TypA/BipA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_003594666.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: ccs:CCNA_00777 PAS family GGDEF/EAL protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003594667.1 PFAM: Transglycosylase-associated protein; KEGG: cak:Caul_0860 transglycosylase-associated protein YP_003594668.1 PFAM: aminotransferase class I and II; KEGG: ccs:CCNA_00775 aspartate aminotransferase YP_003594669.1 KEGG: ccs:CCNA_00703 hypothetical protein YP_003594670.1 KEGG: ccs:CCNA_01458 hypothetical protein YP_003594671.1 KEGG: ccs:CCNA_01457 hypothetical protein YP_003594672.1 KEGG: cak:Caul_1183 transglutaminase domain-containing protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein YP_003594673.1 KEGG: nml:Namu_0922 hypothetical protein YP_003594674.1 PFAM: small multidrug resistance protein; KEGG: gau:GAU_1266 multidrug resistance protein YP_003594675.1 PFAM: isochorismatase hydrolase; KEGG: rba:RB3689 hydrolase of unknown specificity YP_003594676.1 PFAM: Pirin domain protein; KEGG: smt:Smal_1968 pirin domain protein YP_003594677.1 PFAM: DoxX family protein; KEGG: nar:Saro_1637 DoxX YP_003594678.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smd:Smed_5229 LysR family transcriptional regulator YP_003594679.1 KEGG: ccs:CCNA_03171 hybrid sensor histidine kinase/receiver domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003594680.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_03172 3-oxoacyl-(acyl-carrier protein) reductase YP_003594681.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ccs:CCNA_03173 cytosolic protein YP_003594682.1 PFAM: Extensin family protein; KEGG: pzu:PHZ_c3136 hypothetical protein YP_003594683.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_03174 permease YP_003594684.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: ccs:CCNA_03177 methylmalonyl-CoA mutase MeaA-like protein; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_003594685.1 PFAM: glycosyl hydrolase family 9; KEGG: aca:ACP_2738 hypothetical protein YP_003594686.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_03180 enoyl-CoA hydratase/isomerase YP_003594687.1 KEGG: ccs:CCNA_03181 alcohol dehydrogenase; TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003594688.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: cak:Caul_4786 hypothetical protein YP_003594690.1 KEGG: cak:Caul_0928 hypothetical protein YP_003594691.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ccr:CC_0736 hypothetical protein YP_003594692.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ccs:CCNA_00774 ring hydroxylating diooxygenase YP_003594693.1 PFAM: SH3 type 3 domain protein; 17 kDa surface antigen; KEGG: ccs:CCNA_03169 hypothetical protein YP_003594694.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_03185 glutathione S-transferase YP_003594695.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_03184 acyl-CoA dehydrogenase YP_003594696.1 PFAM: beta-lactamase; KEGG: ccs:CCNA_03183 beta-lactamase family protein YP_003594697.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_00770 transcriptional regulator, TetR family YP_003594698.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_00769 transcriptional regulator, TetR family YP_003594699.1 KEGG: ccs:CCNA_00768 hypothetical protein YP_003594700.1 KEGG: ccs:CCNA_00767 hypothetical protein YP_003594701.1 KEGG: ccs:CCNA_00766 cobalamin adenosyltransferase family protein; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_003594702.1 KEGG: ccs:CCNA_00765 hypothetical protein YP_003594703.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ccs:CCNA_00764 electron transfer flavoprotein beta-subunit YP_003594704.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ccs:CCNA_00763 electron transfer flavoprotein alpha-subunit YP_003594706.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_4031 LysR family transcriptional regulator YP_003594707.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: ccs:CCNA_00753 lysine 2,3-aminomutase; PFAM: Radical SAM domain protein YP_003594708.1 KEGG: ccs:CCNA_00752 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_003594709.1 KEGG: ccs:CCNA_00750 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003594710.1 KEGG: ccs:CCNA_00749 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein YP_003594711.1 PFAM: FeoA family protein; KEGG: ccs:CCNA_00748 ferrous iron transport protein A YP_003594712.1 KEGG: ccs:CCNA_00747 cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF; PFAM: EAL domain protein; SMART: EAL domain protein YP_003594713.1 PFAM: Ada metal-binding domain protein; KEGG: ccs:CCNA_00746 ADA regulatory protein/O6-methylguanine-DNA YP_003594714.1 PFAM: Protein of unknown function DUF2086; KEGG: ccs:CCNA_00745 hypothetical protein YP_003594715.1 PFAM: NnrUfamily protein; KEGG: ccs:CCNA_00743 NnrU family membrane protein YP_003594716.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; KEGG: ccs:CCNA_00742 hydrolase (HAD superfamily) YP_003594717.1 PFAM: MaoC domain protein dehydratase; KEGG: ccs:CCNA_00741 3-hydroxybutyryl-CoA dehydratase YP_003594718.1 KEGG: ccs:CCNA_00740 riboflavin kinase/FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase YP_003594719.1 KEGG: ccs:CCNA_00737 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_003594720.1 KEGG: ccr:CC_0700 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_003594721.1 KEGG: ccs:CCNA_00735 hypothetical protein YP_003594722.1 PFAM: GumN family protein; KEGG: ccs:CCNA_00733 GumN superfamily protein YP_003594723.1 PFAM: GumN family protein; KEGG: ccs:CCNA_00732 GumN superfamily protein YP_003594724.1 KEGG: ccs:CCNA_00731 DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_003594725.1 KEGG: ccs:CCNA_00730 transcriptional regulator SkgA; PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; SMART: regulatory protein MerR YP_003594726.1 KEGG: ccs:CCNA_00729 hypothetical protein YP_003594727.1 KEGG: ccs:CCNA_00728 hypothetical protein YP_003594728.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00727 ribosomal-protein-alanine acetyltransferase YP_003594729.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_00726 acyl-CoA dehydrogenase YP_003594730.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; KEGG: ccs:CCNA_00725 O6-methylguanine-DNA methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_003594731.1 KEGG: ccs:CCNA_00724 hypothetical protein YP_003594732.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cak:Caul_4153 glyoxalase/bleomycin resistance protein/dioxygenase YP_003594733.1 PFAM: Chaperonin Cpn10; KEGG: ccs:CCNA_00722 chaperonin GroES YP_003594734.1 KEGG: ccs:CCNA_00721 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003594735.1 KEGG: cak:Caul_4148 hypothetical protein YP_003594736.1 KEGG: ccs:CCNA_00712 hypothetical protein YP_003594737.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: rme:Rmet_5275 intradiol ring-cleavage dioxygenase YP_003594738.1 KEGG: ccs:CCNA_00710 hypothetical protein YP_003594739.1 PFAM: protein of unknown function DUF1328; KEGG: ccs:CCNA_00709 hypothetical protein YP_003594740.1 SMART: von Willebrand factor type A; TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: ccs:CCNA_00708 cobaltochelatase CobT subunit; PFAM: Cobalt chelatase CobT subunit YP_003594741.1 KEGG: ccs:CCNA_00707 hypothetical protein YP_003594742.1 KEGG: ccs:CCNA_00706 hypothetical protein YP_003594743.1 KEGG: ccs:CCNA_00705 hypothetical protein YP_003594744.1 KEGG: sml:Smlt0260 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_003594745.1 KEGG: xcv:XCV0734 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; TIGRFAM: cytidyltransferase-related domain protein; PFAM: NUDIX hydrolase; cytidylyltransferase YP_003594746.1 KEGG: ccs:CCNA_00699 LSU ribosomal protein L28P; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_003594747.1 KEGG: ccs:CCNA_00698 hypothetical protein YP_003594748.1 KEGG: ccs:CCNA_00696 O6-methylguanine-DNA methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_003594749.1 PFAM: amidohydrolase; KEGG: ccs:CCNA_00695 metal-dependent hydrolase YP_003594750.1 KEGG: ccs:CCNA_00694 ATP-dependent DNA helicase; PFAM: helicase domain protein; SMART: helicase domain protein YP_003594751.1 PFAM: RNA-binding S4 domain protein; KEGG: ccs:CCNA_00693 heat shock protein 15 YP_003594752.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: ccs:CCNA_00692 PAS-family GGDEF/EAL protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein YP_003594753.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ccs:CCNA_00691 ferredoxin YP_003594754.1 PFAM: transcription factor CarD; KEGG: ccs:CCNA_00690 CarD-like transcriptional regulator YP_003594755.1 PFAM: beta-lactamase; KEGG: cak:Caul_2779 beta-lactamase YP_003594756.1 KEGG: ccs:CCNA_00688 hypothetical protein YP_003594757.1 KEGG: ade:Adeh_2705 response regulator receiver YP_003594758.1 KEGG: ccs:CCNA_01483 hypothetical protein YP_003594759.1 KEGG: ccs:CCNA_01481 hypothetical protein YP_003594760.1 KEGG: ccs:CCNA_01480 hypothetical protein YP_003594761.1 PFAM: Domain of unknown function DUF1863; Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; KEGG: ccs:CCNA_01479 tetratricopeptide repeat family protein YP_003594762.1 KEGG: ccs:CCNA_01478 transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003594763.1 KEGG: ccs:CCNA_01845 two-component response regulator protein; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver YP_003594764.1 KEGG: ccs:CCNA_01846 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003594765.1 PFAM: Surfeit locus 1 family protein; KEGG: ccs:CCNA_01847 cytochrome C oxidase assembly protein SURF1 YP_003594766.1 KEGG: ccs:CCNA_01848 quinol cytochrome oxidase polypeptide IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_003594767.1 KEGG: ccs:CCNA_01849 quinol cytochrome oxidase polypeptide III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome C oxidase subunit III YP_003594768.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: ccs:CCNA_01850 quinol cytochrome oxidase polypeptide I; PFAM: cytochrome C oxidase subunit I YP_003594769.1 KEGG: ccs:CCNA_01851 quinol cytochrome oxidase polypeptide II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome C oxidase subunit II YP_003594770.1 PFAM: General substrate transporter; KEGG: ccs:CCNA_01852 major facilitator superfamily transporter YP_003594771.1 PFAM: tryptophan halogenase; KEGG: ccs:CCNA_01023 tryptophan halogenase superfamily protein YP_003594772.1 PFAM: tryptophan halogenase; KEGG: ccs:CCNA_01022 tryptophan halogenase superfamily protein YP_003594773.1 KEGG: ccs:CCNA_01021 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594774.1 KEGG: ccs:CCNA_01020 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003594775.1 KEGG: ccs:CCNA_01019 beta-glucosidase; PFAM: glycosyl hydrolase family 3 domain protein YP_003594776.1 KEGG: cak:Caul_0295 PTS system, N-acetylglucosamine-specific IIBC subunit; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site YP_003594777.1 KEGG: ccs:CCNA_00457 phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system, glucose-specific IIA subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003594778.1 KEGG: ccs:CCNA_00456 beta-N-acetylhexosaminidase; PFAM: glycosyl hydrolase, family 20, catalytic core YP_003594779.1 KEGG: ccs:CCNA_00455 N-acetyl-glucosamine/N-acetyl-chitin oligosaccharide outer membrane transporter NagA; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594780.1 KEGG: ccs:CCNA_00454 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003594781.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: ccs:CCNA_00568 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003594782.1 KEGG: cak:Caul_0288 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594783.1 KEGG: ccs:CCNA_00450 chemotaxis protein CheE YP_003594784.1 KEGG: ccs:CCNA_00449 cheYIII; PFAM: response regulator receiver; SMART: response regulator receiver YP_003594785.1 KEGG: ccs:CCNA_00448 chemotaxis protein CheU YP_003594786.1 PFAM: CheD family protein; KEGG: ccs:CCNA_00447 chemotaxis protein CheD; stimulates methylation of MCP proteins YP_003594787.1 KEGG: cak:Caul_0283 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003594788.1 PFAM: chemotaxis protein CheB; response regulator receiver; KEGG: ccs:CCNA_00445 receiver domain-glutamate methylesterase cheBI; SMART: response regulator receiver YP_003594789.1 PFAM: MCP methyltransferase CheR-type; KEGG: ccs:CCNA_00444 chemotaxis protein methyltransferase; SMART: MCP methyltransferase CheR-type YP_003594790.1 KEGG: ccs:CCNA_00443 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_003594791.1 KEGG: ccs:CCNA_00442 chemotaxis histidine kinase protein cheAI; PFAM: Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein YP_003594792.1 KEGG: ccs:CCNA_00441 chemotaxis receiver domain protein cheYI; PFAM: response regulator receiver; SMART: response regulator receiver YP_003594793.1 KEGG: ccs:CCNA_00440 virus protein YP_003594794.1 KEGG: ccs:CCNA_00439 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003594795.1 KEGG: cak:Caul_0275 hypothetical protein YP_003594796.1 KEGG: ccs:CCNA_00437 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003594797.1 KEGG: ccs:CCNA_00436 acyl-CoA dehydrogenase, short-chain specific; PFAM: acyl-CoA dehydrogenase domain protein YP_003594798.1 PFAM: amino acid permease-associated region; KEGG: ccs:CCNA_00435 amino acid permease YP_003594799.1 PFAM: Uncharacterised protein family UPF0324; KEGG: ccr:CC_0425 hypothetical protein YP_003594800.1 KEGG: ccs:CCNA_00433 type 1 capsular polysaccharide biosynthesis protein J YP_003594801.1 KEGG: ccs:CCNA_00432 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_003594802.1 PFAM: aminotransferase class I and II; KEGG: hne:HNE_2357 aminotransferase, classes I and II YP_003594803.1 SMART: transcription factor jumonji jmjC domain protein; KEGG: xac:XAC4050 PASs1-related protein YP_003594804.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_03453 transcriptional regulator YP_003594805.1 PFAM: metallophosphoesterase; KEGG: ccs:CCNA_03454 UDP-2,3-diacylglucosamine hydrolase YP_003594806.1 PFAM: glycosyl transferase group 1; KEGG: ccs:CCNA_03455 glycosyltransferase YP_003594807.1 PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_0553 major facilitator transporter YP_003594808.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: swi:Swit_0554 LysR family transcriptional regulator YP_003594809.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: ccs:CCNA_00369 magnesium and cobalt efflux protein CorC-like protein YP_003594810.1 KEGG: cak:Caul_0263 phosphate ABC transporter, periplasmic phosphate-binding protein PstS YP_003594811.1 PFAM: phosphate-selective porin O and P; KEGG: cak:Caul_0262 phosphate-selective porin O and P YP_003594812.1 KEGG: ccs:CCNA_00368 phosphonates transport system permease protein PhnE; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003594813.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ccs:CCNA_00367 phosphonates-binding protein YP_003594814.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: cak:Caul_0259 phosphonate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_003594815.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: ccs:CCNA_00365 ornithine decarboxylase YP_003594816.1 KEGG: tau:Tola_1240 hypothetical protein YP_003594817.1 KEGG: tau:Tola_1240 hypothetical protein YP_003594818.1 PFAM: deoxyhypusine synthase; KEGG: ccs:CCNA_00364 deoxyhypusine synthase YP_003594819.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: ccs:CCNA_00363 acid phosphatase; SMART: phosphoesterase PA-phosphatase related YP_003594820.1 KEGG: ccs:CCNA_00362 zinc uptake regulation protein YP_003594821.1 KEGG: hypothetical protein YP_003594822.1 KEGG: ccs:CCNA_00361 hypothetical protein YP_003594823.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_00360 hydrolase YP_003594824.1 PFAM: protein of unknown function DUF1130; KEGG: cak:Caul_0251 hypothetical protein YP_003594825.1 KEGG: ccs:CCNA_00359 SH3 domain-containing cell surface protein; PFAM: 17 kDa surface antigen; SH3 type 3 domain protein; SMART: SH3 domain protein YP_003594826.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_00358 delta 3,5-delta2,4-dienoyl-CoA isomerase precursor YP_003594827.1 KEGG: bcg:BCG9842_B3582 hypothetical protein YP_003594828.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: ccs:CCNA_00357 secretory tripeptidyl aminopeptidase YP_003594829.1 PFAM: MltA-interacting MipA family protein; KEGG: ccs:CCNA_00356 outer membrane protein YP_003594830.1 PFAM: pentapeptide repeat protein; KEGG: ccs:CCNA_00355 hypothetical protein YP_003594831.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: cak:Caul_0245 Mg2 transporter protein CorA family protein YP_003594832.1 PFAM: CHAP domain containing protein; KEGG: ccs:CCNA_00354 hypothetical protein YP_003594833.1 PFAM: Integral membrane protein TerC; KEGG: ccs:CCNA_00352 integral membrane protein YP_003594834.1 KEGG: ajs:Ajs_2372 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003594835.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ccs:CCNA_00351 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein YP_003594836.1 PFAM: protein of unknown function DUF484; KEGG: ccs:CCNA_00350 hypothetical protein YP_003594837.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ccs:CCNA_00349 integrase/recombinase, XerC-CodV family YP_003594838.1 KEGG: ccs:CCNA_00348 probable chemoreceptor Y4FA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003594839.1 KEGG: BAT2D1; BAT2 domain containing 1 YP_003594840.1 KEGG: ccs:CCNA_00346 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003594841.1 PFAM: virulence factor family protein; KEGG: cak:Caul_1770 virulence factor family protein YP_003594842.1 KEGG: ccs:CCNA_00344 hypothetical protein YP_003594843.1 KEGG: ccs:CCNA_00343 dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003594844.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: ccs:CCNA_00342 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component YP_003594845.1 KEGG: ccs:CCNA_00341 succinyl-CoA synthetase subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein YP_003594846.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: ccs:CCNA_00340 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003594847.1 KEGG: cak:Caul_0228 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; glycosyl hydrolase family 18; glycosyl transferase family 2; SMART: chitinase II YP_003594848.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00338 TonB-dependent receptor YP_003594849.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_00337 transcriptional regulator, TetR family YP_003594850.1 PFAM: Carotenoid oxygenase; KEGG: ccs:CCNA_00336 lignostilbene-alpha,beta-dioxygenase YP_003594851.1 PFAM: Protein of unknown function DUF2141; KEGG: ccs:CCNA_00335 hypothetical protein YP_003594852.1 PFAM: Protein of unknown function DUF2306, membrane; KEGG: ccs:CCNA_00334 hypothetical protein YP_003594853.1 PFAM: LytTr DNA-binding region; KEGG: ccs:CCNA_00333 LytTr DNA-binding domain protein YP_003594854.1 KEGG: cak:Caul_1086 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003594855.1 KEGG: cak:Caul_1087 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003594856.1 KEGG: cak:Caul_1088 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein hemolysin D YP_003594858.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_1089 TetR family transcriptional regulator YP_003594859.1 KEGG: cak:Caul_1362 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003594860.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: cak:Caul_1361 acyl-CoA dehydrogenase domain-containing protein YP_003594861.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_1360 TonB-dependent receptor YP_003594862.1 KEGG: ccs:CCNA_00332 molybdenum transport system permease protein ModB; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003594863.1 KEGG: ccs:CCNA_00331 molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003594864.1 KEGG: ara:Arad_1394 transcriptional regulator protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003594865.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: ret:RHE_CH01176 hypothetical protein YP_003594866.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rhi:NGR_c28870 glyoxylase YP_003594867.1 PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_3119 glutathione S-transferase YP_003594868.1 KEGG: ccs:CCNA_00328 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_003594869.1 PFAM: nitroreductase; KEGG: ccs:CCNA_00327 nitrobenzoate nitroreductase YP_003594870.1 KEGG: ccs:CCNA_00326 vegetatible incompatibility protein HET-E-1 YP_003594871.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ccs:CCNA_00324 TolR protein YP_003594872.1 KEGG: pfo:Pfl01_4199 signal transduction protein YP_003594873.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ccs:CCNA_00323 low-affinity zinc transport protein YP_003594874.1 KEGG: ccs:CCNA_00322 hypothetical protein YP_003594875.1 KEGG: ccs:CCNA_00321 LSU ribosomal protein L21P; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_003594876.1 KEGG: ccs:CCNA_00320 LSU ribosomal protein L27P; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_003594877.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00319 acetyltransferase, GNAT family YP_003594878.1 KEGG: ccs:CCNA_00318 hypothetical protein YP_003594879.1 KEGG: ccs:CCNA_00317 GTP-binding protein CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_003594880.1 SMART: PUA domain containing protein; TIGRFAM: glutamate 5-kinase; KEGG: ccs:CCNA_00316 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein YP_003594881.1 KEGG: ccs:CCNA_00315 3-polyprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_003594882.1 KEGG: ccs:CCNA_00314 hypothetical protein YP_003594883.1 KEGG: ccs:CCNA_00313 hypothetical protein; manually curated; PFAM: peptidase M14 carboxypeptidase A YP_003594884.1 KEGG: ccs:CCNA_00312 hypothetical protein YP_003594885.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ccs:CCNA_00311 microcin-processing peptidase 1 (PmbA) YP_003594886.1 PFAM: inositol monophosphatase; KEGG: ccs:CCNA_00310 myo-inositol-1(or 4)-monophosphatase YP_003594887.1 KEGG: ccs:CCNA_00309 cytosolic protein YP_003594888.1 KEGG: ccs:CCNA_00308 hypothetical protein YP_003594889.1 KEGG: ccs:CCNA_00307 phospholipid-lipopolysaccharide ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003594890.1 PFAM: protein of unknown function DUF374; KEGG: cak:Caul_4539 hypothetical protein YP_003594891.1 KEGG: ccs:CCNA_00305 cobalt-zinc-cadmium resistance protein CzcD; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003594892.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: ccs:CCNA_00304 3-deoxy-D-manno-octulosonic-acid transferase YP_003594893.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: ccs:CCNA_00303 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_003594894.1 PFAM: amidohydrolase; KEGG: ccs:CCNA_00302 parathion hydrolase YP_003594895.1 PFAM: aminoglycoside phosphotransferase; KEGG: ccs:CCNA_00301 phosphotransferase family protein YP_003594896.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: ccs:CCNA_00299 phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, N-domain; phosphoribosylglycinamide synthetase, C-domain YP_003594897.1 KEGG: ccs:CCNA_00298 hypothetical protein YP_003594898.1 PFAM: LytTr DNA-binding region; KEGG: ccs:CCNA_00297 two-component response regulator YP_003594899.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: ccs:CCNA_02945 PAS-family sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver YP_003594900.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cak:Caul_4546 two component transcriptional regulator; SMART: response regulator receiver YP_003594901.1 KEGG: ccs:CCNA_00295 phosphate transport system protein PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_003594902.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: ccs:CCNA_00294 phosphate transport ATP-binding protein PstB; SMART: AAA ATPase YP_003594903.1 KEGG: ccs:CCNA_00293 phosphate transport system permease protein PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_003594904.1 KEGG: ccs:CCNA_00292 phosphate transport system permease protein PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_003594905.1 KEGG: ccs:CCNA_00291 phosphate regulon sensor protein PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003594906.1 PFAM: Autotransporter beta- domain protein; KEGG: ccs:CCNA_00290 autotransporter protein YP_003594907.1 PFAM: phosphate-selective porin O and P; KEGG: cak:Caul_4553 phosphate-selective porin O and P YP_003594908.1 KEGG: cak:Caul_4554 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003594909.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold domain protein; ATP-binding region ATPase domain protein; KEGG: ccs:CCNA_00287 photosensory histidine protein kinase LovK; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003594910.1 KEGG: ccs:CCNA_00286 two-component receiver domain protein LovR; PFAM: response regulator receiver; SMART: response regulator receiver YP_003594911.1 KEGG: cak:Caul_4557 hypothetical protein YP_003594912.1 TIGRFAM: acetylglutamate kinase; KEGG: cak:Caul_4558 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003594913.1 KEGG: ccs:CCNA_00284 hydrolase (HAD superfamily); TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003594914.1 KEGG: ccs:CCNA_00283 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_003594915.1 KEGG: ccs:CCNA_00282 conserved cell surface protein YP_003594916.1 TIGRFAM: methionyl-tRNA formyltransferase; KEGG: ccs:CCNA_00281 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_003594917.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: ccs:CCNA_00280 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003594918.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: cak:Caul_4565 NAD(P)H dehydrogenase (quinone) YP_003594919.1 KEGG: ccs:CCNA_00278 glutaminase; PFAM: Glutaminase, core YP_003594920.1 KEGG: ccs:CCNA_00277 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003594921.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: ccs:CCNA_00276 hypothetical protein YP_003594922.1 PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_0926 glutathione S-transferase YP_003594923.1 TIGRFAM: peptide deformylase; KEGG: ccs:CCNA_00273 peptide deformylase; PFAM: formylmethionine deformylase YP_003594924.1 PFAM: protein of unknown function DUF195; KEGG: ccs:CCNA_00272 RmuC family protein YP_003594925.1 KEGG: ccs:CCNA_00271 hypothetical protein YP_003594926.1 KEGG: ccs:CCNA_00270 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR YP_003594927.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_00269 transcriptional regulatory protein YP_003594928.1 SMART: AAA ATPase; TIGRFAM: DNA polymerase III, subunits gamma and tau; KEGG: ccs:CCNA_00268 DNA polymerase III subunit gamma/tau; PFAM: AAA ATPase central domain protein YP_003594929.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: ccs:CCNA_00267 MutT-like protein YP_003594930.1 TIGRFAM: AMP nucleosidase; KEGG: ccs:CCNA_00265 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1 YP_003594931.1 PFAM: sodium:dicarboxylate symporter; KEGG: ccs:CCNA_00264 C4-dicarboxylate transport protein YP_003594932.1 KEGG: ccs:CCNA_00263 hypothetical protein YP_003594933.1 KEGG: cak:Caul_0800 hypothetical protein YP_003594934.1 KEGG: ccs:CCNA_00261 ribonucleoside-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_003594935.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_00260 glutathione S-transferase YP_003594936.1 KEGG: net:Neut_1367 hypothetical protein YP_003594937.1 KEGG: bbt:BBta_0018 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003594938.1 PFAM: Abortive infection protein; KEGG: hne:HNE_0710 CAAX amino protease YP_003594939.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: ccs:CCNA_03599 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_003594940.1 TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; KEGG: ccs:CCNA_03607 ribonucleoside-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein YP_003594941.1 KEGG: ccs:CCNA_03605 hypothetical protein YP_003594942.1 KEGG: ccs:CCNA_03604 hypothetical protein YP_003594943.1 PFAM: regulatory protein TetR; KEGG: pla:Plav_2820 TetR family transcriptional regulator YP_003594944.1 KEGG: cak:Caul_1685 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003594945.1 PFAM: Patatin; KEGG: ccs:CCNA_03602 patatin family phospholipase domain protein YP_003594946.1 PFAM: Hly-III family protein; KEGG: cak:Caul_4657 Hly-III family protein YP_003594947.1 PFAM: protein of unknown function DUF81; KEGG: ccs:CCNA_03600 integral membrane protein YP_003594948.1 PFAM: OmpA/MotB domain protein; KEGG: ccs:CCNA_03609 cell surface antigen Sca2 YP_003594949.1 PFAM: Methyltransferase type 11; KEGG: ccs:CCNA_03610 methyltransferase YP_003594950.1 KEGG: pzu:PHZ_c1351 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003594951.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: ccs:CCNA_03611 glutathione-regulated potassium-efflux system protein KefC YP_003594952.1 KEGG: ccs:CCNA_03612 transcriptional regulatory protein YP_003594953.1 KEGG: cak:Caul_4672 potassium efflux system protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_003594954.1 PFAM: MaoC domain protein dehydratase; KEGG: ccs:CCNA_03613 3-hydroxybutyryl-CoA dehydratase YP_003594955.1 KEGG: ccs:CCNA_03619 zinc metalloprotease; PFAM: peptidase M13; Peptidase M13, neprilysin-like YP_003594956.1 PFAM: secretion protein hemolysin D; major facilitator superfamily MFS_1; KEGG: cak:Caul_5420 transporter YP_003594957.1 KEGG: cak:Caul_5418 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003594958.1 KEGG: neu:NE1190 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003594959.1 KEGG: rpb:RPB_2157 hypothetical protein YP_003594960.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: ccs:CCNA_03627 probable ATP phosphoribosyltransferase regulatory subunit YP_003594961.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: ccs:CCNA_03628 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003594962.1 KEGG: azc:AZC_0111 hypothetical protein YP_003594963.1 manually curated; KEGG: slo:Shew_2180 hypothetical protein YP_003594964.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: ccs:CCNA_03633 cytosolic protein YP_003594965.1 KEGG: ccs:CCNA_03634 hypothetical protein YP_003594966.1 KEGG: Exocyst complex component Sec3 YP_003594967.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00224 hypothetical protein YP_003594968.1 KEGG: ccs:CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase; PFAM: phosphoglucose isomerase (PGI) YP_003594969.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ccs:CCNA_00220 thiol-disulfide isomerase and thioredoxin YP_003594970.1 PFAM: protein of unknown function DUF1353; KEGG: cak:Caul_4690 hypothetical protein YP_003594971.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: ccs:CCNA_00217 thiol:disulfide interchange protein DsbD YP_003594972.1 KEGG: ccs:CCNA_00216 hypothetical protein YP_003594973.1 PFAM: SapC family protein; KEGG: ccs:CCNA_00215 cytosolic protein YP_003594974.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_4694 TonB-dependent receptor YP_003594975.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: cak:Caul_4695 acid phosphatase; SMART: phosphoesterase PA-phosphatase related YP_003594976.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00213 ribosomal-protein-alanine acetyltransferase YP_003594977.1 KEGG: ccs:CCNA_00212 N-carbamoylputrescine amidase; TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003594978.1 KEGG: ccs:CCNA_00211 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_003594979.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_4698 TonB-dependent receptor YP_003594980.1 PFAM: glycosyl transferase family 39; KEGG: ccs:CCNA_00209 UDP-phosphomannose:protein mannosyltransferase YP_003594981.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: ccs:CCNA_00207 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; PFAM: coenzyme A transferase YP_003594982.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: ccs:CCNA_00206 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A; PFAM: coenzyme A transferase YP_003594983.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ccs:CCNA_00205 NAD(P)H oxidoreductase YheR YP_003594984.1 KEGG: ccs:CCNA_00204 glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_003594985.1 SMART: Helix-turn-helix, AraC domain; KEGG: bbt:BBta_5602 AraC family transcriptional regulator YP_003594986.1 PFAM: fatty acid desaturase; KEGG: ccr:CC_0202 hypothetical protein YP_003594987.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: ccs:CCNA_00201 outer membrane protein YP_003594988.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: ccs:CCNA_00200 2OG-Fe(II) oxygenase superfamily protein YP_003594989.1 PFAM: TadE family protein; KEGG: ccs:CCNA_00199 hypothetical protein YP_003594990.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: ccs:CCNA_00198 tRNA (guanine-N1) -methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003594991.1 KEGG: ccs:CCNA_00197 LSU ribosomal protein L19P; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_003594992.1 KEGG: gbr:Gbro_1413 nucleotidyl transferase YP_003594993.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_1466 LysR family transcriptional regulator YP_003594994.1 KEGG: ccs:CCNA_00196 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_003594995.1 KEGG: ccs:CCNA_00195 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_003594996.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: cak:Caul_0214 antibiotic biosynthesis monooxygenase YP_003594997.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: ccs:CCNA_00193 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003594998.1 KEGG: cak:Caul_0222 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; CHASE3 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003594999.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_00192 long-chain-fatty-acid--CoA ligase YP_003595000.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_00191 N-acetylglutamate synthase domain protein YP_003595001.1 KEGG: ank:AnaeK_1617 hypothetical protein YP_003595002.1 PFAM: thioesterase superfamily protein; KEGG: pzu:PHZ_c0100 phenylacetic acid degradation-related protein YP_003595003.1 PFAM: aldo/keto reductase; KEGG: cak:Caul_4616 aldo/keto reductase YP_003595004.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cak:Caul_4617 LysR family transcriptional regulator YP_003595005.1 KEGG: ccs:CCNA_01163 ice nucleation protein YP_003595006.1 KEGG: ccs:CCNA_00758 protein translation elongation factor P EF-P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein YP_003595007.1 PFAM: tRNA synthetase class II (D K and N); KEGG: ccs:CCNA_00757 lysyl-tRNA synthetase YP_003595008.1 KEGG: ccs:CCNA_00756 hypothetical protein YP_003595009.1 PFAM: Tellurite resistance TerB; KEGG: ccs:CCNA_00755 tellurium resistance protein TerB YP_003595010.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: ccs:CCNA_00754 hypothetical protein YP_003595011.1 PFAM: thioesterase superfamily protein; KEGG: ccr:CC_0190 cytosolic long-chain acyl-CoA thioester hydrolase family protein YP_003595012.1 PFAM: Zinc finger, CHCC-type; KEGG: cak:Caul_4186 hypothetical protein YP_003595013.1 KEGG: ccs:CCNA_00188 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003595014.1 PFAM: purine nucleoside permease; KEGG: ccs:CCNA_00187 NUP-family purine nucleoside permease YP_003595015.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: rec:RHECIAT_CH0002504 two-component sensor histidine kinase protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003595016.1 manually curated; KEGG: mch:Mchl_0020 circadian clock protein, KaiC; PFAM: KaiA binding YP_003595017.1 PFAM: glycosyl hydrolase family 65 central catalytic; glycosyl hydrolase family 65 domain protein; KEGG: fjo:Fjoh_4428 glycosyl hydrolase YP_003595018.1 KEGG: cak:Caul_4065 hypothetical protein YP_003595019.1 KEGG: cak:Caul_4974 glucokinase; PFAM: Glucokinase YP_003595020.1 PFAM: sodium:dicarboxylate symporter; KEGG: oan:Oant_3480 C4-dicarboxylate transporter DctA YP_003595021.1 KEGG: rru:Rru_A1436 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003595022.1 KEGG: pmr:PMI1871 NAD synthetase YP_003595023.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: ccs:CCNA_00168 capsule polysaccharide export protein YP_003595024.1 PFAM: metallophosphoesterase; KEGG: ccs:CCNA_00167 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YP_003595025.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: ccs:CCNA_00166 hypothetical protein YP_003595026.1 KEGG: syp:SYNPCC7002_A2820 hypothetical protein YP_003595027.1 PFAM: O-antigen polymerase; KEGG: ccs:CCNA_00164 O-antigen polymerase YP_003595028.1 TIGRFAM: capsular exopolysaccharide family; KEGG: ccs:CCNA_00163 chain length regulator/tyrosine-protein kinase (capsular polysaccharide biosynthesis); PFAM: lipopolysaccharide biosynthesis protein YP_003595029.1 PFAM: Protein of unknown function DUF2320; KEGG: ccs:CCNA_00162 hypothetical protein YP_003595030.1 KEGG: ccs:CCNA_00161 hypothetical protein YP_003595031.1 PFAM: chemotaxis sensory transducer; KEGG: ccs:CCNA_00160 methyl-accepting chemotaxis protein YP_003595032.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: ccs:CCNA_00158 DNA replication and repair protein RecF; SMART: AAA ATPase YP_003595034.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_00157 glyoxalase family protein YP_003595035.1 PFAM: GrpE protein; KEGG: ccs:CCNA_00153 GrpE protein YP_003595036.1 KEGG: ccs:CCNA_00152 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein YP_003595037.1 TIGRFAM: ribonuclease PH; KEGG: ccs:CCNA_00151 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003595038.1 KEGG: ccr:CC_0151 PDZ domain-containing protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003595039.1 SMART: helix-turn-helix domain protein; KEGG: ccs:CCNA_00149 transcriptional regulator, Cro/CI family YP_003595040.1 KEGG: ccs:CCNA_00148 hypothetical protein YP_003595041.1 KEGG: ccs:CCNA_00147 hypothetical protein YP_003595042.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_00146 glutathione S-transferase YP_003595043.1 KEGG: ccs:CCNA_00145 xanthosine triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_003595044.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ccs:CCNA_00143 tetrapyrrole (corrin/porphyrin) methylase family protein YP_003595045.1 PFAM: protein of unknown function UPF0102; KEGG: ccs:CCNA_00142 endonuclease YP_003595046.1 KEGG: ccs:CCNA_00141 tetratricopeptide repeat family protein YP_003595047.1 TIGRFAM: glutathione synthetase; KEGG: ccs:CCNA_00140 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_003595048.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: ccs:CCNA_00139 magnesium chelatase subunit ChlI-like ATPase; SMART: AAA ATPase YP_003595049.1 KEGG: ccs:CCNA_00137 hybrid two-component histidine kinase/receiver protein ShkA; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003595050.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_00136 AmpG protein YP_003595051.1 KEGG: ccs:CCNA_00135 endopeptidase DegP YP_003595052.1 PFAM: protein of unknown function DUF350; KEGG: ccs:CCNA_00134 surface protein YP_003595053.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pde:Pden_4519 activator of HSP90 ATPase 1 family protein YP_003595054.1 SMART: regulatory protein ArsR; KEGG: pde:Pden_4518 regulatory protein, ArsR YP_003595055.1 KEGG: ccs:CCNA_00133 radical SAM family enzyme; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_003595056.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00132 ketoacyl reductase HetN YP_003595057.1 KEGG: ccs:CCNA_03582 3'(2'),5'-bisphosphate nucleotidase/myo-inositol 1-(4-)phosphatase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase YP_003595058.1 KEGG: ccs:CCNA_03583 hypothetical protein YP_003595059.1 PFAM: Protein of unknown function DUF2328; KEGG: ccs:CCNA_03584 histidine phosphotransferase ChpT YP_003595060.1 KEGG: ccs:CCNA_03585 chemotaxis receiver domain protein cheYIV; PFAM: response regulator receiver; SMART: response regulator receiver YP_003595061.1 PFAM: MCP methyltransferase CheR-type; KEGG: ccs:CCNA_03586 chemotaxis protein methyltransferase; SMART: MCP methyltransferase CheR-type YP_003595062.1 KEGG: cak:Caul_0094 hypothetical protein YP_003595063.1 PFAM: Entericidin EcnAB; KEGG: ccs:CCNA_03587 entericidin B-like protein YP_003595064.1 KEGG: ccs:CCNA_03588 two-component sensor histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003595065.1 KEGG: ccs:CCNA_03589 RNA polymerase ECF-type sigma factor SigT; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003595066.1 KEGG: ccs:CCNA_03590 hypothetical protein YP_003595067.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: response regulator receiver; KEGG: cak:Caul_0089 two-component response regulator; SMART: response regulator receiver YP_003595068.1 KEGG: cak:Caul_0088 hypothetical protein YP_003595069.1 KEGG: ccs:CCNA_03668 hypothetical protein YP_003595070.1 PFAM: OmpA/MotB domain protein; KEGG: cak:Caul_0086 OmpA/MotB domain-containing protein YP_003595071.1 PFAM: 17 kDa surface antigen; KEGG: cak:Caul_0085 17 kDa surface antigen YP_003595072.1 PFAM: diacylglycerol kinase catalytic region; KEGG: ccs:CCNA_03670 diacylglycerol kinase catalytic region YP_003595073.1 PFAM: metallophosphoesterase; KEGG: ccs:CCNA_03671 predicted phosphohydrolase, Icc family YP_003595074.1 PFAM: protein of unknown function DUF1328; KEGG: pzu:PHZ_c0308 hypothetical protein YP_003595075.1 KEGG: ccs:CCNA_03672 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like YP_003595076.1 KEGG: ccs:CCNA_03673 hypothetical protein YP_003595077.1 KEGG: ccs:CCNA_03674 hypothetical protein YP_003595078.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; GAF domain protein; response regulator receiver; KEGG: ccs:CCNA_03675 PAS-family sensor histidine kinase; SMART: response regulator receiver YP_003595079.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_03676 GNAT acetyltranferase protein YP_003595080.1 KEGG: ccs:CCNA_03677 CoA-transferase family III protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_003595081.1 KEGG: cak:Caul_0076 hypothetical protein YP_003595082.1 KEGG: ccs:CCNA_03680 aminopeptidase N YP_003595083.1 KEGG: ccs:CCNA_03681 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003595084.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ccs:CCNA_03682 fumarylpyruvate hydrolase YP_003595085.1 TIGRFAM: maleylacetoacetate isomerase; KEGG: ccs:CCNA_03683 maleylpyruvate isomerase; PFAM: Glutathione S-transferase domain YP_003595086.1 KEGG: ccs:CCNA_03684 carbonic anhydrase; PFAM: carbonic anhydrase YP_003595087.1 PFAM: carbonic anhydrase; KEGG: ccs:CCNA_03687 carbonic anhydrase YP_003595088.1 KEGG: ccs:CCNA_03688 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type YP_003595089.1 KEGG: ccs:CCNA_03689 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003595090.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: ccs:CCNA_03690 spore coat polysaccharide biosynthesis protein SpsF YP_003595091.1 PFAM: aldo/keto reductase; KEGG: ccs:CCNA_03691 IolS protein YP_003595092.1 PFAM: protein of unknown function DUF182; KEGG: ccs:CCNA_03692 xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_003595093.1 PFAM: creatininase; KEGG: ccs:CCNA_03693 creatinine amidohydrolase family protein YP_003595094.1 PFAM: GAF domain protein; helix-turn-helix Fis-type; KEGG: ccs:CCNA_03694 transcriptional regulator YP_003595095.1 KEGG: ccs:CCNA_03695 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003595096.1 KEGG: ccs:CCNA_03696 acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003595097.1 PFAM: cyclase/dehydrase; KEGG: ccs:CCNA_03697 cyclase/dehydrase YP_003595098.1 KEGG: ccs:CCNA_03698 hypothetical protein; manually curated; PFAM: thiol-disulphide oxidoreductase DCC YP_003595099.1 KEGG: mrd:Mrad2831_6244 response regulator receiver modulated GAF sensor protein; PFAM: HWE histidine kinase; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: GAF domain protein YP_003595100.1 PFAM: peptidase M16 domain protein; KEGG: ccs:CCNA_03699 peptidase, M16 family YP_003595101.1 KEGG: ccs:CCNA_03700 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_003595102.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: ccs:CCNA_03701 integration host factor beta-subunit; SMART: histone family protein DNA-binding protein YP_003595103.1 KEGG: nar:Saro_0838 hypothetical protein YP_003595104.1 KEGG: ccs:CCNA_03702 SSU ribosomal protein S1P; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_003595105.1 KEGG: ccs:CCNA_03703 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_003595106.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: ccs:CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003595107.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_03705 hypothetical protein YP_003595108.1 PFAM: heat shock protein Hsp20; KEGG: ccs:CCNA_03706 small heat shock protein YP_003595109.1 PFAM: protein of unknown function DUF1150; KEGG: ccs:CCNA_03707 hypothetical protein YP_003595110.1 KEGG: ccs:CCNA_03710 nitrogen regulatory IIA protein; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_003595111.1 KEGG: ccs:CCNA_03711 ribosome-associated factor Y; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_003595112.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: ccs:CCNA_03712 hypothetical protein YP_003595113.1 KEGG: ccs:CCNA_03713 RNA polymerase sigma-54 factor RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_003595114.1 KEGG: ccs:CCNA_03714 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_003595115.1 PFAM: OstA family protein; KEGG: ccs:CCNA_03715 protein YhbN precursor YP_003595116.1 PFAM: protein of unknown function DUF1239; KEGG: ccs:CCNA_03716 hypothetical protein YP_003595117.1 KEGG: ccs:CCNA_03717 ribonuclease D; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease YP_003595118.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_03718 NADH-ubiquinone oxidoreductase subunit YP_003595119.1 TIGRFAM: undecaprenol kinase; KEGG: ccs:CCNA_03719 UDP-diphosphatase (bacitracin resistance protein); PFAM: Bacitracin resistance protein BacA YP_003595120.1 KEGG: ccs:CCNA_03721 glutamate synthase (NADPH) small chain; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003595121.1 KEGG: ccs:CCNA_03722 glutamate synthase (NADPH) large chain; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_003595122.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: ccs:CCNA_03725 ATP-dependent DNA ligase YP_003595123.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_0966 transport protein YP_003595124.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ccs:CCNA_03726 transcriptional regulator YP_003595125.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ccs:CCNA_03727 small-conductance mechanosensitive channel McsS YP_003595126.1 KEGG: rer:RER_47740 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003595127.1 KEGG: dhd:Dhaf_3957 hypothetical protein YP_003595128.1 KEGG: ccs:CCNA_03728 hypothetical protein YP_003595129.1 TIGRFAM: transaldolase; KEGG: ccs:CCNA_03729 transaldolase-like protein; PFAM: Transaldolase YP_003595130.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: ccs:CCNA_03730 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_003595131.1 KEGG: ccs:CCNA_03731 histidinol-phosphatase; TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003595132.1 KEGG: ccs:CCNA_03732 mannose-6-phosphate isomerase; PFAM: N-acylglucosamine 2-epimerase YP_003595133.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: ccs:CCNA_03733 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II YP_003595134.1 KEGG: ccs:CCNA_03734 glutamine-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase YP_003595135.1 KEGG: ccs:CCNA_03735 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region YP_003595136.1 PFAM: Carbohydrate-selective porin OprB; KEGG: ccs:CCNA_02982 porin YP_003595137.1 PFAM: protein of unknown function YGGT; KEGG: cak:Caul_4761 protein of unknown function YGGT YP_003595138.1 PFAM: protein of unknown function DUF167; KEGG: ccs:CCNA_03737 YggU superfamily protein YP_003595139.1 KEGG: ccs:CCNA_03738 hybrid histidine kinase/receiver domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003595140.1 KEGG: ccs:CCNA_03739 very short patch repair endonuclease; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr YP_003595141.1 KEGG: ccs:CCNA_03740 cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003595142.1 KEGG: ccs:CCNA_03741 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_003595143.1 KEGG: ccs:CCNA_03742 hypothetical protein YP_003595144.1 PFAM: beta-lactamase; KEGG: ccs:CCNA_03743 beta-lactamase family protein YP_003595145.1 KEGG: ccs:CCNA_01199 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_003595146.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: pab:PAB0789 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_003595147.1 KEGG: ccs:CCNA_03744 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_003595148.1 KEGG: ccs:CCNA_03745 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_003595149.1 PFAM: glycosyl transferase family 2; KEGG: ccs:CCNA_03747 glycosyltransferase YP_003595150.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: ccs:CCNA_03748 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003595151.1 PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_03749 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase YP_003595152.1 KEGG: ccs:CCNA_03750 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein YP_003595153.1 PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: ccs:CCNA_03751 peptidyl-prolyl cis-trans isomerase YP_003595154.1 PFAM: Nucleotidyl transferase; KEGG: ccs:CCNA_03752 UTP-glucose-1-phosphate uridylyltransferase YP_003595155.1 PFAM: domain of unknown function DUF1730; KEGG: ccs:CCNA_03753 iron-sulfur cluster-binding protein YP_003595156.1 PFAM: Glutathione S-transferase domain; KEGG: ccs:CCNA_03754 glutathione S-transferase family protein YP_003595157.1 KEGG: ccs:CCNA_03755 D-glycero-D-manno-heptose-7-phosphate 1-kinase/D-glycero-D-manno-heptose-1-phosphate adenylyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase YP_003595158.1 KEGG: ccs:CCNA_03756 cobalt-zinc-cadmium resistance protein CzcD; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003595159.1 KEGG: ccs:CCNA_03757 citrate synthase; PFAM: Citrate synthase YP_003595160.1 PFAM: Citrate synthase; KEGG: ccs:CCNA_03758 citrate synthase YP_003595161.1 KEGG: ccs:CCNA_03759 mRNA 3'-end processing factor YP_003595162.1 PFAM: thioesterase superfamily protein; KEGG: ccs:CCNA_03760 cytosolic protein YP_003595163.1 PFAM: thioesterase superfamily protein; KEGG: ccs:CCNA_03761 cytosolic protein YP_003595164.1 KEGG: nar:Saro_0891 hypothetical protein; manually curated; PFAM: Uncharacterised conserved protein UCP037205 YP_003595165.1 KEGG: ccs:CCNA_03762 hypothetical protein YP_003595166.1 KEGG: ccs:CCNA_03763 deacetylase; PFAM: histone deacetylase superfamily YP_003595167.1 PFAM: acyl-CoA thioesterase; KEGG: ccs:CCNA_03764 acyl-CoA thioesterase YP_003595168.1 KEGG: sro:Sros_1489 peptidase S41; PFAM: peptidase S41; SMART: peptidase S41 YP_003595169.1 PFAM: NUDIX hydrolase; KEGG: ccs:CCNA_03765 phosphohydrolase (MutT/NUDIX family protein) YP_003595170.1 KEGG: ccs:CCNA_03766 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_003595171.1 KEGG: ccs:CCNA_03767 SSU ribosomal protein S16P; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_003595172.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: ccs:CCNA_03768 signal recognition particle GTPase, SRP; SMART: AAA ATPase YP_003595173.1 PFAM: Domain of unknown function DUF1993; KEGG: ccs:CCNA_03769 hypothetical protein YP_003595174.1 KEGG: cak:Caul_5005 signal-transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_003595175.1 KEGG: ccs:CCNA_03770 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_003595176.1 PFAM: MaoC domain protein dehydratase; KEGG: ccs:CCNA_03771 dehydrogenase with MaoC-like domain/dehydrogenase with MaoC-like domain YP_003595177.1 PFAM: histidine triad (HIT) protein; KEGG: ccs:CCNA_03772 HIT1 protein YP_003595178.1 KEGG: ccs:CCNA_03773 hypothetical protein YP_003595179.1 KEGG: ccs:CCNA_03774 citrate lyase subunit beta/citryl-CoA lyase subunit; PFAM: HpcH/HpaI aldolase YP_003595180.1 PFAM: Protein of unknown function DUF2237; KEGG: cak:Caul_4999 hypothetical protein YP_003595181.1 KEGG: ccr:CC_3516 hypothetical protein YP_003595182.1 KEGG: ABA-induced protein YP_003595183.1 KEGG: ccs:CCNA_02654 hypothetical protein YP_003595184.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: ccs:CCNA_03822 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_003595185.1 KEGG: ccs:CCNA_03823 ubiquinone/menaquinone biosynthesis methyltransferase UbiE; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_003595186.1 KEGG: ccs:CCNA_03824 2-polyprenylphenol 6-hydroxylase accessory protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein YP_003595187.1 KEGG: ccs:CCNA_03826 hypothetical protein YP_003595188.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: ccs:CCNA_03827 phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003595189.1 KEGG: pzu:PHZ_c2164 hypothetical protein YP_003595190.1 KEGG: ccs:CCNA_03828 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_003595191.1 KEGG: ccs:CCNA_03829 hypothetical protein YP_003595192.1 KEGG: pzu:PHZ_c1198 methyl-accepting chemotaxis protein McpU; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003595193.1 PFAM: secretion protein hemolysin D; KEGG: ccs:CCNA_03830 multidrug resistance protein A YP_003595194.1 KEGG: ccs:CCNA_03831 multidrug resistance protein B; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003595195.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_5065 TetR family transcriptional regulator YP_003595196.1 KEGG: ccs:CCNA_03833 enoyl-(acyl-carrier protein) reductase (NADH) YP_003595197.1 PFAM: Beta-ketoacyl synthase; KEGG: ccs:CCNA_03835 3-oxoacyl-(acyl-carrier-protein) synthase YP_003595198.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: ccs:CCNA_03836 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003595199.1 PFAM: protein of unknown function DUF1058; KEGG: ccs:CCNA_03837 hypothetical protein YP_003595200.1 KEGG: ccs:CCNA_03838 gluconate 2-dehydrogenase/glyoxylate reductase/hydroxypyruvate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_003595201.1 KEGG: ccs:CCNA_03776 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX YP_003595202.1 PFAM: aldo/keto reductase; KEGG: ccs:CCNA_03777 Tas protein YP_003595203.1 PFAM: protein of unknown function UPF0005; KEGG: pzu:PHZ_c0145 hypothetical protein YP_003595204.1 KEGG: cak:Caul_0164 hypothetical protein YP_003595205.1 KEGG: ccs:CCNA_03779 cytosolic protein YP_003595206.1 PFAM: protein of unknown function DUF1223; KEGG: ccs:CCNA_03780 hypothetical protein YP_003595207.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: ccs:CCNA_03782 heme exporter protein A; SMART: AAA ATPase YP_003595208.1 KEGG: ccs:CCNA_03783 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome C-type biogenesis protein CcmB YP_003595209.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccs:CCNA_03784 transporter YP_003595210.1 PFAM: protein of unknown function DUF1520; KEGG: cak:Caul_4985 hypothetical protein YP_003595211.1 KEGG: ccs:CCNA_03786 heme chaperone heme-lyase; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein YP_003595212.1 KEGG: ccs:CCNA_03787 heme exporter protein CcmD; TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD) YP_003595213.1 KEGG: ccs:CCNA_03788 thiol:disulfide interchange protein TlpA; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein YP_003595214.1 KEGG: ccs:CCNA_03790 hypothetical protein YP_003595215.1 KEGG: ccs:CCNA_03791 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003595216.1 PFAM: Intracellular septation protein A; KEGG: ccs:CCNA_03792 intracellular septation protein YP_003595217.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: ccs:CCNA_03793 cell division protein FtsY; SMART: AAA ATPase YP_003595218.1 PFAM: protein of unknown function UPF0126; KEGG: ccs:CCNA_03794 hypothetical protein YP_003595219.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: cak:Caul_4864 glutathione-dependent formaldehyde-activating GFA YP_003595220.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cak:Caul_4865 endonuclease/exonuclease/phosphatase YP_003595221.1 TIGRFAM: diaminopimelate epimerase; KEGG: ccs:CCNA_03800 diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003595222.1 PFAM: Ion transport 2 domain protein; KEGG: cak:Caul_4869 ion transport 2 domain-containing protein YP_003595223.1 KEGG: ccs:CCNA_03801 prolyl endopeptidase family; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_003595224.1 KEGG: ccs:CCNA_03802 hypothetical protein; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_003595225.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_03804 cytosolic protein YP_003595226.1 PFAM: transcriptional regulator PadR family protein; KEGG: ccs:CCNA_03805 transcriptional regulator YP_003595227.1 PFAM: VacJ family lipoprotein; KEGG: ccs:CCNA_03806 outer membrane lipoprotein YP_003595228.1 PFAM: toluene tolerance family protein; KEGG: ccs:CCNA_03807 organic solvent resistance transport system Ttg2D protein YP_003595229.1 PFAM: Mammalian cell entry related domain protein; KEGG: cak:Caul_1330 hypothetical protein YP_003595230.1 PFAM: protein of unknown function DUF140; KEGG: cak:Caul_1329 hypothetical protein YP_003595231.1 KEGG: cak:Caul_1328 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_003595232.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ccs:CCNA_03811 transcriptional regulator, LysR family YP_003595233.1 KEGG: ccs:CCNA_03813 intermediate filament-like cell shape determinant CreS YP_003595234.1 PFAM: Polyketide cyclase/dehydrase; KEGG: ccs:CCNA_03814 hypothetical protein YP_003595235.1 PFAM: GumN family protein; KEGG: ccs:CCNA_03815 GumN superfamily protein YP_003595236.1 KEGG: ccs:CCNA_03816 peptidyl-dipeptidase DCP; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_003595237.1 TIGRFAM: glutamate racemase; KEGG: ccs:CCNA_03817 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003595238.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: ccs:CCNA_03819 cell division protein FtsK YP_003595239.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: ccs:CCNA_03820 outer-membrane lipoproteins carrier protein YP_003595240.1 KEGG: ccs:CCNA_03821 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_003595241.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_B0546 epimerase/dehydratase YP_003595242.1 SMART: helix-turn-helix domain protein; KEGG: rlg:Rleg_2624 transcriptional regulator, XRE family YP_003595243.1 KEGG: pzu:PHZ_c3382 methyl-accepting chemotaxis protein McpA; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003595244.1 PFAM: phosphate-selective porin O and P; KEGG: cak:Caul_0262 phosphate-selective porin O and P YP_003595245.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: ccs:CCNA_00005 DNA polymerase III, subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III YP_003595246.1 KEGG: ccs:CCNA_00004 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_003595247.1 KEGG: ccs:CCNA_00003 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_003595248.1 PFAM: Maf family protein; KEGG: ccs:CCNA_00002 septum formation protein Maf YP_003595249.1 PFAM: protein of unknown function DUF299; KEGG: ccr:CC_0001 hypothetical protein YP_003595250.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: ccs:CCNA_03879 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_003595251.1 TIGRFAM: ferrochelatase; KEGG: ccs:CCNA_03878 ferrochelatase; PFAM: ferrochelatase YP_003595252.1 PFAM: conserved hypothetical protein; KEGG: ccs:CCNA_03877 hypothetical protein YP_003595253.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: ccr:CC_3760 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_003595254.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ccs:CCNA_03875 quinone oxidoreductase YP_003595255.1 KEGG: ccs:CCNA_03874 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_003595256.1 KEGG: ccs:CCNA_03873 hypothetical protein YP_003595257.1 KEGG: ccs:CCNA_03872 tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_003595258.1 KEGG: ccs:CCNA_03871 glucose inhibited division protein A; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003595259.1 KEGG: ccs:CCNA_03870 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_003595260.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ccs:CCNA_03869 chromosome partitioning protein ParA YP_003595261.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ccs:CCNA_03868 chromosome partitioning protein ParB; SMART: ParB domain protein nuclease YP_003595262.1 KEGG: ccs:CCNA_03867 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta YP_003595263.1 PFAM: Protein of unknown function DUF2159, secreted; KEGG: ccs:CCNA_03866 hypothetical protein YP_003595264.1 KEGG: ccs:CCNA_03865 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_003595265.1 KEGG: ccs:CCNA_03864 cytosolic protein YP_003595266.1 KEGG: ccs:CCNA_03863 hypothetical protein YP_003595267.1 PFAM: thiamine monophosphate synthase; KEGG: ccs:CCNA_03862 regulatory protein TenI YP_003595268.1 PFAM: alanine racemase domain protein; KEGG: ccs:CCNA_03861 pyridoxal 5'-phosphate dependent enzyme class III YP_003595269.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ccs:CCNA_03860 cytosolic protein YP_003595270.1 KEGG: ccs:CCNA_03859 two-component response regulator CenR; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003595271.1 KEGG: ccs:CCNA_03858 protein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_003595272.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: ccs:CCNA_03857 transporter YP_003595273.1 manually curated; PFAM: Smr protein/MutS2; KEGG: ccs:CCNA_03855 MuttS related protein; SMART: Smr protein/MutS2 YP_003595274.1 KEGG: ccs:CCNA_03854 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_003595275.1 KEGG: ccs:CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003595276.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: cak:Caul_5043 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_003595277.1 KEGG: ccs:CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_003595278.1 KEGG: ccs:CCNA_03850 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_003595279.1 PFAM: PfkB domain protein; KEGG: ccs:CCNA_03849 fructokinase YP_003595280.1 KEGG: ccs:CCNA_03848 transporter YP_003595281.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: ccs:CCNA_03847 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_003595282.1 PFAM: Protein of unknown function DUF2244, transmembrane; KEGG: ccs:CCNA_03846 hypothetical protein YP_003595283.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; KEGG: ccs:CCNA_03845 ADA regulatory protein/O6-methylguanine-DNA methyltransferase; SMART: Helix-turn-helix, AraC domain YP_003595284.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: ccs:CCNA_03844 ATP-dependent endopeptidase hsl ATP-binding subunit HslU; SMART: AAA ATPase YP_003595285.1 KEGG: cak:Caul_5053 hypothetical protein YP_003595286.1 PFAM: 20S proteasome A and B subunits; KEGG: ccs:CCNA_03843 ATP-dependent endopeptidase hsl proteolytic subunit HslV YP_003595287.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: ccs:CCNA_03842 molybdopterin biosynthesis MoeB protein YP_003595288.1 TIGRFAM: succinate CoA transferase; KEGG: ccs:CCNA_03840 succinyl-CoA:coenzyme A transferase; PFAM: acetyl-CoA hydrolase/transferase YP_003595289.1 PFAM: globin; KEGG: cak:Caul_5057 globin YP_003595290.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_00006 enoyl-CoA hydratase YP_003595291.1 KEGG: ccs:CCNA_00007 SSU ribosomal protein S20P; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20