-- dump date 20140619_025003 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 515618000001 SEQ_END SEQ_END NC_013962.1 7737 7737 DR NC_013962.1; contig end 7737..7737 Candidatus Riesia pediculicola USDA 515618000002 SEQ_END SEQ_END NC_014109.1 574390 574390 DR NC_014109.1; contig end 574390..574390 Candidatus Riesia pediculicola USDA YP_003533065.1 CDS panB NC_013962.1 117 974 D identified by match to protein family HMM PF02548; match to protein family HMM TIGR00222; 3-methyl-2-oxobutanoate hydroxymethyltransferase 117..974 Candidatus Riesia pediculicola USDA 8918993 YP_003533066.1 CDS panC NC_013962.1 976 1836 D identified by match to protein family HMM PF02569; match to protein family HMM TIGR00018; pantoate--beta-alanine ligase 976..1836 Candidatus Riesia pediculicola USDA 8918988 YP_003533067.1 CDS RIEPE_A0003 NC_013962.1 1845 1979 R identified by glimmer; putative; hypothetical protein complement(1845..1979) Candidatus Riesia pediculicola USDA 8918991 YP_003533068.1 CDS RIEPE_A0004 NC_013962.1 1972 2406 D identified by match to protein family HMM PF00011; heat shock protein 1972..2406 Candidatus Riesia pediculicola USDA 8918986 YP_003533069.1 CDS RIEPE_A0005 NC_013962.1 2684 3523 R replication initiator and transcription repressor complement(2684..3523) Candidatus Riesia pediculicola USDA 8918983 YP_003533070.1 CDS RIEPE_A0006 NC_013962.1 3543 3722 R identified by glimmer; putative; hypothetical protein complement(3543..3722) Candidatus Riesia pediculicola USDA 8918992 YP_003533071.1 CDS RIEPE_A0007 NC_013962.1 3862 4701 R replication initiator and transcription repressor complement(3862..4701) Candidatus Riesia pediculicola USDA 8918989 YP_003533072.1 CDS RIEPE_A0008 NC_013962.1 4721 4900 R identified by glimmer; putative; hypothetical protein complement(4721..4900) Candidatus Riesia pediculicola USDA 8918982 YP_003533073.1 CDS panE NC_013962.1 5040 5969 R identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase complement(5040..5969) Candidatus Riesia pediculicola USDA 8918985 YP_003533074.1 CDS RIEPE_A0010 NC_013962.1 6028 6171 R identified by glimmer; putative; hypothetical protein complement(6028..6171) Candidatus Riesia pediculicola USDA 8918987 YP_003533075.1 CDS RIEPE_A0011 NC_013962.1 6681 6866 R identified by glimmer; putative; hypothetical protein complement(6681..6866) Candidatus Riesia pediculicola USDA 8918984 YP_003533076.1 CDS RIEPE_A0012 NC_013962.1 7282 7518 R identified by glimmer; putative; hypothetical protein complement(7282..7518) Candidatus Riesia pediculicola USDA 8918990 YP_003602896.1 CDS kdsC1 NC_014109.1 719 1276 D identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 719..1276 Candidatus Riesia pediculicola USDA 9112128 YP_003602897.1 CDS mreC1 NC_014109.1 1989 2822 R identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219; rod shape-determining protein MreC complement(1989..2822) Candidatus Riesia pediculicola USDA 9112095 YP_003602898.1 CDS RIEPE_0004 NC_014109.1 2874 3734 R identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904; Rod shape-determining protein MreB complement(2874..3734) Candidatus Riesia pediculicola USDA 9112025 YP_003602899.1 CDS RIEPE_0005 NC_014109.1 4322 4444 D identified by glimmer; putative; hypothetical protein 4322..4444 Candidatus Riesia pediculicola USDA 9111736 YP_003602900.1 CDS aroQ1 NC_014109.1 4450 4965 D identified by match to protein family HMM PF01220; match to protein family HMM TIGR01088; 3-dehydroquinate dehydratase, type II 4450..4965 Candidatus Riesia pediculicola USDA 9111949 YP_003602901.1 CDS accB1 NC_014109.1 4985 5470 D identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 4985..5470 Candidatus Riesia pediculicola USDA 9112182 YP_003602902.1 CDS accC1 NC_014109.1 5463 6773 D identified by match to protein family HMM PF00289; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase 5463..6773 Candidatus Riesia pediculicola USDA 9111833 YP_003602903.1 CDS rpoH1 NC_014109.1 6852 7712 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02392; match to protein family HMM TIGR02937; alternative sigma factor RpoH complement(6852..7712) Candidatus Riesia pediculicola USDA 9112093 YP_003602904.1 CDS RIEPE_0010 NC_014109.1 8011 8559 R identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; putative methyltransferase complement(8011..8559) Candidatus Riesia pediculicola USDA 9112039 YP_003602905.1 CDS ftsY NC_014109.1 8699 9631 D identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 8699..9631 Candidatus Riesia pediculicola USDA 9112081 YP_003602906.1 CDS rpoH2 NC_014109.1 9930 10790 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02392; match to protein family HMM TIGR02937; alternative sigma factor RpoH 9930..10790 Candidatus Riesia pediculicola USDA 9111999 YP_003602907.1 CDS accC2 NC_014109.1 10869 12179 R identified by match to protein family HMM PF00289; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase complement(10869..12179) Candidatus Riesia pediculicola USDA 9111936 YP_003602908.1 CDS accB2 NC_014109.1 12172 12657 R identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(12172..12657) Candidatus Riesia pediculicola USDA 9111864 YP_003602909.1 CDS aroQ2 NC_014109.1 12677 13192 R identified by match to protein family HMM PF01220; match to protein family HMM TIGR01088; 3-dehydroquinate dehydratase, type II complement(12677..13192) Candidatus Riesia pediculicola USDA 9111728 YP_003602910.1 CDS RIEPE_0016 NC_014109.1 13198 13320 R identified by glimmer; putative; hypothetical protein complement(13198..13320) Candidatus Riesia pediculicola USDA 9111913 YP_003602911.1 CDS RIEPE_0017 NC_014109.1 13726 14769 D identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904; Rod shape-determining protein MreB 13726..14769 Candidatus Riesia pediculicola USDA 9112167 YP_003602912.1 CDS mreC2 NC_014109.1 14821 15654 D identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219; rod shape-determining protein MreC 14821..15654 Candidatus Riesia pediculicola USDA 9111795 YP_003602913.1 CDS kdsC2 NC_014109.1 16367 16900 R identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(16367..16900) Candidatus Riesia pediculicola USDA 9112009 YP_003602914.1 CDS RIEPE_0020 NC_014109.1 17682 17930 D identified by match to protein family HMM PF01722; BolA/YrbA family protein 17682..17930 Candidatus Riesia pediculicola USDA 9112082 YP_003602915.1 CDS RIEPE_0021 NC_014109.1 18010 18126 R identified by glimmer; putative; hypothetical protein complement(18010..18126) Candidatus Riesia pediculicola USDA 9111971 YP_003602916.1 CDS RIEPE_0023 NC_014109.1 18230 19267 D UDP-N-acetylglucosamine 1-carboxyvinyltransferase 18230..19267 Candidatus Riesia pediculicola USDA 9111906 YP_003602917.1 CDS RIEPE_0024 NC_014109.1 19342 20808 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; protease DegQ complement(19342..20808) Candidatus Riesia pediculicola USDA 9112049 YP_003602918.1 CDS RIEPE_0025 NC_014109.1 21199 21315 R identified by glimmer; putative; hypothetical protein complement(21199..21315) Candidatus Riesia pediculicola USDA 9112243 YP_003602919.1 CDS rplM NC_014109.1 21461 21865 D identified by match to protein family HMM PF00572; match to protein family HMM TIGR01066; 50S ribosomal protein L13 21461..21865 Candidatus Riesia pediculicola USDA 9111796 YP_003602920.1 CDS rpsI NC_014109.1 21871 22269 D identified by match to protein family HMM PF00380; 30S ribosomal protein S9 21871..22269 Candidatus Riesia pediculicola USDA 9111713 YP_003602921.1 CDS RIEPE_0028 NC_014109.1 22331 22477 R identified by glimmer; putative; hypothetical protein complement(22331..22477) Candidatus Riesia pediculicola USDA 9111981 YP_003602922.1 CDS RIEPE_0029 NC_014109.1 22940 23836 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; hypothetical protein 22940..23836 Candidatus Riesia pediculicola USDA 9111900 YP_003602923.1 CDS RIEPE_0030 NC_014109.1 24368 25030 D inner membrane protein YghB 24368..25030 Candidatus Riesia pediculicola USDA 9112099 YP_003602924.1 CDS coaBC NC_014109.1 25409 26650 D identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 25409..26650 Candidatus Riesia pediculicola USDA 9112018 YP_003602925.1 CDS RIEPE_0032 NC_014109.1 26628 27086 D identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; deoxyuridine 5'-triphosphate nucleotidohydrolase 26628..27086 Candidatus Riesia pediculicola USDA 9112207 YP_003602926.1 CDS RIEPE_0033 NC_014109.1 27506 28390 D identified by match to protein family HMM PF03755; match to protein family HMM TIGR00255; hypothetical protein 27506..28390 Candidatus Riesia pediculicola USDA 9112122 YP_003602927.1 CDS pfkA NC_014109.1 28645 29649 D identified by match to protein family HMM PF00365; match to protein family HMM TIGR02482; 6-phosphofructokinase 28645..29649 Candidatus Riesia pediculicola USDA 9111922 YP_003602928.1 CDS bioH NC_014109.1 29654 30442 D identified by match to protein family HMM PF00561; match to protein family HMM TIGR01738; putative pimeloyl-BioC--CoA transferase BioH 29654..30442 Candidatus Riesia pediculicola USDA 9111715 YP_003602929.1 CDS fumC NC_014109.1 30511 31878 R identified by match to protein family HMM PF00206; fumarate hydratase, class II complement(30511..31878) Candidatus Riesia pediculicola USDA 9111828 YP_003602930.1 CDS RIEPE_0037 NC_014109.1 31936 32166 R hypothetical protein complement(31936..32166) Candidatus Riesia pediculicola USDA 9112176 YP_003602931.1 CDS RIEPE_0038 NC_014109.1 32194 33297 R identified by match to protein family HMM PF00730; A/G-specific adenine glycosylase complement(32194..33297) Candidatus Riesia pediculicola USDA 9112238 YP_003602932.1 CDS ispF NC_014109.1 33465 33953 R identified by match to protein family HMM PF02542; match to protein family HMM TIGR00151; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(33465..33953) Candidatus Riesia pediculicola USDA 9112062 YP_003602933.1 CDS ispD NC_014109.1 33970 34698 R identified by match to protein family HMM PF01128; match to protein family HMM TIGR00453; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(33970..34698) Candidatus Riesia pediculicola USDA 9111875 YP_003602934.1 CDS RIEPE_0041 NC_014109.1 34858 35013 R cell division protein FtsB complement(34858..35013) Candidatus Riesia pediculicola USDA 9112134 YP_003602935.1 CDS RIEPE_0048 NC_014109.1 40630 41478 R identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D complement(40630..41478) Candidatus Riesia pediculicola USDA 9112257 YP_003602936.1 CDS RIEPE_0049 NC_014109.1 41788 41943 D identified by glimmer; putative; hypothetical protein 41788..41943 Candidatus Riesia pediculicola USDA 9111845 YP_003602937.1 CDS rplS NC_014109.1 42141 42503 R identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024; ribosomal protein L19 complement(42141..42503) Candidatus Riesia pediculicola USDA 9112068 YP_003602938.1 CDS trmD NC_014109.1 42534 43298 R identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N1)-methyltransferase complement(42534..43298) Candidatus Riesia pediculicola USDA 9111841 YP_003602939.1 CDS rpsP NC_014109.1 43376 43639 R identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; ribosomal protein S16 complement(43376..43639) Candidatus Riesia pediculicola USDA 9111929 YP_003602940.1 CDS RIEPE_0053 NC_014109.1 43651 44985 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; Ffh protein complement(43651..44985) Candidatus Riesia pediculicola USDA 9112209 YP_003602941.1 CDS gshA NC_014109.1 45169 46737 R identified by match to protein family HMM PF04262; match to protein family HMM TIGR01434; glutamate--cysteine ligase complement(45169..46737) Candidatus Riesia pediculicola USDA 9111838 YP_003602942.1 CDS csrA NC_014109.1 47094 47273 R identified by match to protein family HMM PF02599; match to protein family HMM TIGR00202; carbon storage regulator complement(47094..47273) Candidatus Riesia pediculicola USDA 9112275 YP_003602943.1 CDS RIEPE_0059 NC_014109.1 47475 47600 D identified by glimmer; putative; hypothetical protein 47475..47600 Candidatus Riesia pediculicola USDA 9111988 YP_003602944.1 CDS RIEPE_0060 NC_014109.1 48526 49806 R identified by match to protein family HMM PF01411; alanyl-tRNA synthetase complement(48526..49806) Candidatus Riesia pediculicola USDA 9112060 YP_003602945.1 CDS recA NC_014109.1 49857 50855 R identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; protein RecA complement(49857..50855) Candidatus Riesia pediculicola USDA 9112133 YP_003602946.1 CDS gmhA NC_014109.1 51220 51804 R identified by match to protein family HMM PF01380; match to protein family HMM TIGR00441; phosphoheptose isomerase complement(51220..51804) Candidatus Riesia pediculicola USDA 9112202 YP_003602947.1 CDS RIEPE_0063 NC_014109.1 52177 53145 D identified by match to protein family HMM PF02951; match to protein family HMM PF02955; glutathione synthetase 52177..53145 Candidatus Riesia pediculicola USDA 9111976 YP_003602948.1 CDS RIEPE_0064 NC_014109.1 53251 53814 D identified by match to protein family HMM PF02622; hypothetical protein 53251..53814 Candidatus Riesia pediculicola USDA 9111768 YP_003602949.1 CDS RIEPE_0065 NC_014109.1 54473 55069 D hypothetical protein 54473..55069 Candidatus Riesia pediculicola USDA 9112102 YP_003602950.1 CDS pabA NC_014109.1 55144 55827 R identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; para-aminobenzoate synthase glutamine amidotransferase component II complement(55144..55827) Candidatus Riesia pediculicola USDA 9111907 YP_003602951.1 CDS RIEPE_0069 NC_014109.1 58795 58923 R identified by glimmer; putative; hypothetical protein complement(58795..58923) Candidatus Riesia pediculicola USDA 9112079 YP_003602952.1 CDS RIEPE_0070 NC_014109.1 59212 59472 R identified by match to protein family HMM PF00111; adrenodoxin family ferredoxin complement(59212..59472) Candidatus Riesia pediculicola USDA 9112179 YP_003602953.1 CDS RIEPE_0071 NC_014109.1 59475 60602 R identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase, beta subunit complement(59475..60602) Candidatus Riesia pediculicola USDA 9111876 YP_003602954.1 CDS RIEPE_0072 NC_014109.1 60614 62908 R identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF03477; match to protein family HMM TIGR02506; ribonucleoside-diphosphate reductase, alpha subunit complement(60614..62908) Candidatus Riesia pediculicola USDA 9111722 YP_003602955.1 CDS ubiG NC_014109.1 63184 63909 R identified by match to protein family HMM TIGR01983; 3-demethylubiquinone-9 3-methyltransferase complement(63184..63909) Candidatus Riesia pediculicola USDA 9111770 YP_003602956.1 CDS gyrA NC_014109.1 64051 66588 D identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase, A subunit 64051..66588 Candidatus Riesia pediculicola USDA 9111819 YP_003602957.1 CDS RIEPE_0076 NC_014109.1 67002 67298 R identified by match to protein family HMM PF01386; ribosomal L25p family complement(67002..67298) Candidatus Riesia pediculicola USDA 9112272 YP_003602958.1 CDS RIEPE_0077 NC_014109.1 67396 68583 R identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(67396..68583) Candidatus Riesia pediculicola USDA 9112185 YP_003602959.1 CDS miaB NC_014109.1 68687 70024 D identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; tRNA-I(6)A37 thiotransferase enzyme MiaB 68687..70024 Candidatus Riesia pediculicola USDA 9112005 YP_003602960.1 CDS RIEPE_0079 NC_014109.1 70245 70700 D identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; hypothetical protein 70245..70700 Candidatus Riesia pediculicola USDA 9112066 YP_003602961.1 CDS RIEPE_0080 NC_014109.1 70767 71633 D identified by match to protein family HMM PF00571; match to protein family HMM PF03471; magnesium and cobalt efflux protein CorC 70767..71633 Candidatus Riesia pediculicola USDA 9111874 YP_003602962.1 CDS RIEPE_0081 NC_014109.1 72166 72306 R identified by glimmer; putative; hypothetical protein complement(72166..72306) Candidatus Riesia pediculicola USDA 9112245 YP_003602963.1 CDS RIEPE_0082 NC_014109.1 72780 72911 R identified by glimmer; putative; hypothetical protein complement(72780..72911) Candidatus Riesia pediculicola USDA 9112007 YP_003602964.1 CDS leuS NC_014109.1 73294 75891 D identified by match to protein family HMM PF00133; match to protein family HMM TIGR00396; leucyl-tRNA synthetase 73294..75891 Candidatus Riesia pediculicola USDA 9112021 YP_003602965.1 CDS RIEPE_0084 NC_014109.1 76208 77242 D identified by match to protein family HMM PF06144; DNA polymerase III, delta subunit superfamily 76208..77242 Candidatus Riesia pediculicola USDA 9112212 YP_003602966.1 CDS RIEPE_0085 NC_014109.1 77232 77930 D identified by match to protein family HMM PF01467; nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) 77232..77930 Candidatus Riesia pediculicola USDA 9112150 YP_003602967.1 CDS RIEPE_0086 NC_014109.1 78124 80025 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 2 78124..80025 Candidatus Riesia pediculicola USDA 9111781 YP_003602968.1 CDS mrdB NC_014109.1 80032 81156 D identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape-determining protein RodA 80032..81156 Candidatus Riesia pediculicola USDA 9111959 YP_003602969.1 CDS RIEPE_0087 NC_014109.1 81107 81226 R identified by glimmer; putative; hypothetical protein complement(81107..81226) Candidatus Riesia pediculicola USDA 9111884 YP_003602970.1 CDS lipB NC_014109.1 81283 81900 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00214; lipoyltransferase 81283..81900 Candidatus Riesia pediculicola USDA 9111773 YP_003602971.1 CDS lipA NC_014109.1 82022 82894 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00510; lipoic acid synthetase 82022..82894 Candidatus Riesia pediculicola USDA 9111956 YP_003602972.1 CDS RIEPE_0091 NC_014109.1 82917 83126 R identified by match to protein family HMM PF00313; hypothetical protein complement(82917..83126) Candidatus Riesia pediculicola USDA 9111750 YP_003602973.1 CDS RIEPE_0092 NC_014109.1 83237 83812 R identified by match to protein family HMM PF04307; inner membrane protein YdjM complement(83237..83812) Candidatus Riesia pediculicola USDA 9111826 YP_003602974.1 CDS RIEPE_0093 NC_014109.1 84050 84172 R identified by glimmer; putative; hypothetical protein complement(84050..84172) Candidatus Riesia pediculicola USDA 9111813 YP_003602975.1 CDS RIEPE_0094 NC_014109.1 84269 84394 R identified by glimmer; putative; hypothetical protein complement(84269..84394) Candidatus Riesia pediculicola USDA 9111771 YP_003602976.1 CDS thrS NC_014109.1 84794 86038 D identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00418; threonyl-tRNA synthetase 84794..86038 Candidatus Riesia pediculicola USDA 9111975 YP_003602977.1 CDS infC NC_014109.1 86028 86579 D identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 86028..86579 Candidatus Riesia pediculicola USDA 9112083 YP_003602978.1 CDS rplT NC_014109.1 86893 87246 D identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032; ribosomal protein L20 86893..87246 Candidatus Riesia pediculicola USDA 9112203 YP_003602979.1 CDS RIEPE_0098 NC_014109.1 87460 88191 D identified by match to protein family HMM PF01409; phenylalanyl-tRNA synthetase 87460..88191 Candidatus Riesia pediculicola USDA 9112175 YP_003602980.1 CDS pheT NC_014109.1 88206 90668 D identified by match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase, beta subunit 88206..90668 Candidatus Riesia pediculicola USDA 9112054 YP_003602981.1 CDS RIEPE_0100 NC_014109.1 90691 91551 R identified by match to protein family HMM PF03613; match to protein family HMM TIGR00828; mannose permease IID component complement(90691..91551) Candidatus Riesia pediculicola USDA 9111853 YP_003602982.1 CDS RIEPE_0101 NC_014109.1 91572 92390 R identified by match to protein family HMM PF03609; fructose permease IIC component complement(91572..92390) Candidatus Riesia pediculicola USDA 9111749 YP_003602983.1 CDS RIEPE_0102 NC_014109.1 92451 93440 R identified by match to protein family HMM PF03610; match to protein family HMM PF03830; match to protein family HMM TIGR00854; pts system mannose-specific eiiab component (eiiab-man) complement(92451..93440) Candidatus Riesia pediculicola USDA 9111946 YP_003602984.1 CDS pabB NC_014109.1 93818 95200 R identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00553; para-aminobenzoate synthase, component I complement(93818..95200) Candidatus Riesia pediculicola USDA 9111846 YP_003602985.1 CDS RIEPE_0104 NC_014109.1 95591 95728 R identified by glimmer; putative; hypothetical protein complement(95591..95728) Candidatus Riesia pediculicola USDA 9111939 YP_003602986.1 CDS RIEPE_0106 NC_014109.1 95990 96850 D identified by match to protein family HMM PF04231; endonuclease-1 95990..96850 Candidatus Riesia pediculicola USDA 9112244 YP_003602987.1 CDS glmS NC_014109.1 96837 98681 R identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glucosamine--fructose-6-phosphate aminotransferase, isomerizing complement(96837..98681) Candidatus Riesia pediculicola USDA 9111983 YP_003602988.1 CDS RIEPE_0107 NC_014109.1 98728 100101 R identified by match to protein family HMM PF00483; bifunctional protein GlmU complement(98728..100101) Candidatus Riesia pediculicola USDA 9112196 YP_003602989.1 CDS RIEPE_0108 NC_014109.1 100229 100363 D identified by glimmer; putative; hypothetical protein 100229..100363 Candidatus Riesia pediculicola USDA 9111856 YP_003602990.1 CDS RIEPE_0109 NC_014109.1 100606 100722 R identified by glimmer; putative; hypothetical protein complement(100606..100722) Candidatus Riesia pediculicola USDA 9112169 YP_003602991.1 CDS gidA1 NC_014109.1 100784 102652 R identified by match to protein family HMM PF01134; match to protein family HMM TIGR00136; glucose-inhibited division protein A complement(100784..102652) Candidatus Riesia pediculicola USDA 9111967 YP_003602992.1 CDS RIEPE_0111 NC_014109.1 102885 104459 R identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888; GMP synthase (glutamine-hydrolyzing) complement(102885..104459) Candidatus Riesia pediculicola USDA 9112023 YP_003602993.1 CDS RIEPE_0112 NC_014109.1 104472 105941 R identified by match to protein family HMM PF00478; inosine-5'-monophosphate dehydrogenase complement(104472..105941) Candidatus Riesia pediculicola USDA 9112227 YP_003602994.1 CDS RIEPE_0113 NC_014109.1 106893 109568 D identified by match to protein family HMM TIGR00759; pyruvate dehydrogenase E1 component 106893..109568 Candidatus Riesia pediculicola USDA 9111755 YP_003602995.1 CDS RIEPE_0114 NC_014109.1 109585 110871 D identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex 109585..110871 Candidatus Riesia pediculicola USDA 9112117 YP_003602996.1 CDS RIEPE_0115 NC_014109.1 110881 110994 D identified by glimmer; putative; hypothetical protein 110881..110994 Candidatus Riesia pediculicola USDA 9112199 YP_003602997.1 CDS lpdA NC_014109.1 111011 112459 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoamide dehydrogenase 111011..112459 Candidatus Riesia pediculicola USDA 9111909 YP_003602998.1 CDS rpiA NC_014109.1 112823 113491 D identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A 112823..113491 Candidatus Riesia pediculicola USDA 9112101 YP_003602999.1 CDS RIEPE_0118 NC_014109.1 113817 115004 D 2-octaprenyl-6-methoxyphenyl hydroxylase, putative 113817..115004 Candidatus Riesia pediculicola USDA 9111714 YP_003603000.1 CDS RIEPE_0119 NC_014109.1 115039 115236 D identified by glimmer; putative; hypothetical protein 115039..115236 Candidatus Riesia pediculicola USDA 9112116 YP_003603001.1 CDS prfB NC_014109.1 117347 118456 D identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 117347..118456 Candidatus Riesia pediculicola USDA 9111735 YP_003603002.1 CDS lysS NC_014109.1 118498 119970 D identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysyl-tRNA synthetase 118498..119970 Candidatus Riesia pediculicola USDA 9111726 YP_003603003.1 CDS xth NC_014109.1 120084 120887 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 120084..120887 Candidatus Riesia pediculicola USDA 9111942 YP_003603004.1 CDS sppA NC_014109.1 120988 122892 D identified by match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 67K type 120988..122892 Candidatus Riesia pediculicola USDA 9112149 YP_003603005.1 CDS gap NC_014109.1 123174 124175 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 123174..124175 Candidatus Riesia pediculicola USDA 9111805 YP_003603006.1 CDS RIEPE_0128 NC_014109.1 124378 125190 D enoyl-[acyl-carrier-protein] reductase (NADH) 124378..125190 Candidatus Riesia pediculicola USDA 9112055 YP_003603007.1 CDS tyrS NC_014109.1 125237 126520 R identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase complement(125237..126520) Candidatus Riesia pediculicola USDA 9111871 YP_003603008.1 CDS RIEPE_0130 NC_014109.1 126577 126708 D identified by glimmer; putative; hypothetical protein 126577..126708 Candidatus Riesia pediculicola USDA 9111785 YP_003603009.1 CDS RIEPE_0131 NC_014109.1 126790 127110 R identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; putative glutaredoxin homolog complement(126790..127110) Candidatus Riesia pediculicola USDA 9112192 YP_003603010.1 CDS pyk NC_014109.1 127513 128925 D identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 127513..128925 Candidatus Riesia pediculicola USDA 9112188 YP_003603011.1 CDS RIEPE_0133 NC_014109.1 129098 129331 D hypothetical protein 129098..129331 Candidatus Riesia pediculicola USDA 9112113 YP_003603012.1 CDS RIEPE_0134 NC_014109.1 129393 130352 R identified by match to protein family HMM PF03734; LysM domain protein complement(129393..130352) Candidatus Riesia pediculicola USDA 9112044 YP_003603013.1 CDS RIEPE_0135 NC_014109.1 130398 130805 R identified by match to protein family HMM PF02657; cysteine desulfuration protein SufE complement(130398..130805) Candidatus Riesia pediculicola USDA 9111985 YP_003603014.1 CDS RIEPE_0136 NC_014109.1 130822 132108 R identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; aminotransferase, class-V complement(130822..132108) Candidatus Riesia pediculicola USDA 9111798 YP_003603015.1 CDS RIEPE_0137 NC_014109.1 132108 133397 R identified by match to protein family HMM PF01458; SufB/sufD domain protein complement(132108..133397) Candidatus Riesia pediculicola USDA 9111711 YP_003603016.1 CDS sufC NC_014109.1 133387 134130 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC complement(133387..134130) Candidatus Riesia pediculicola USDA 9112186 YP_003603017.1 CDS sufB NC_014109.1 134175 135668 R identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB complement(134175..135668) Candidatus Riesia pediculicola USDA 9111854 YP_003603018.1 CDS RIEPE_0140 NC_014109.1 135673 136077 R identified by match to protein family HMM PF01521; iron-sulfur cluster assembly scaffold protein complement(135673..136077) Candidatus Riesia pediculicola USDA 9111893 YP_003603019.1 CDS RIEPE_0141 NC_014109.1 136474 136632 D identified by glimmer; putative; hypothetical protein 136474..136632 Candidatus Riesia pediculicola USDA 9112004 YP_003603020.1 CDS RIEPE_0142 NC_014109.1 136681 137760 D identified by match to protein family HMM PF00793; match to protein family HMM TIGR00034; phospho-2-dehydro-3-deoxyheptonate aldolase 136681..137760 Candidatus Riesia pediculicola USDA 9111991 YP_003603021.1 CDS RIEPE_0143 NC_014109.1 137823 139136 R identified by match to protein family HMM PF01136; peptidase U32 complement(137823..139136) Candidatus Riesia pediculicola USDA 9112197 YP_003603022.1 CDS RIEPE_0144 NC_014109.1 139283 139876 R identified by match to protein family HMM PF01769; magnesium transporter complement(139283..139876) Candidatus Riesia pediculicola USDA 9112160 YP_003603023.1 CDS upp NC_014109.1 141301 141927 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 141301..141927 Candidatus Riesia pediculicola USDA 9111834 YP_003603024.1 CDS RIEPE_0146 NC_014109.1 142490 142732 D hypothetical protein 142490..142732 Candidatus Riesia pediculicola USDA 9111791 YP_003603025.1 CDS dapA NC_014109.1 142790 143719 D identified by match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase 142790..143719 Candidatus Riesia pediculicola USDA 9111731 YP_003603026.1 CDS RIEPE_0148 NC_014109.1 143764 144327 R identified by match to protein family HMM PF00271; ATP-dependent DNA helicase RecG complement(143764..144327) Candidatus Riesia pediculicola USDA 9112069 YP_003603027.1 CDS RIEPE_0149 NC_014109.1 144347 145843 R identified by match to protein family HMM PF00270; match to protein family HMM PF01336; match to protein family HMM PF04851; ATP-dependent DNA helicase RecG complement(144347..145843) Candidatus Riesia pediculicola USDA 9111947 YP_003603028.1 CDS RIEPE_0150 NC_014109.1 145926 146573 R identified by match to protein family HMM PF00625; guanylate kinase complement(145926..146573) Candidatus Riesia pediculicola USDA 9111772 YP_003603029.1 CDS RIEPE_0151 NC_014109.1 146942 148288 D identified by match to protein family HMM PF02638; YddW 146942..148288 Candidatus Riesia pediculicola USDA 9111817 YP_003603030.1 CDS asd NC_014109.1 148303 149424 D identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01745; aspartate-semialdehyde dehydrogenase 148303..149424 Candidatus Riesia pediculicola USDA 9111732 YP_003603031.1 CDS gyrB NC_014109.1 149457 151874 R identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase, B subunit complement(149457..151874) Candidatus Riesia pediculicola USDA 9111904 YP_003603032.1 CDS dnaN NC_014109.1 152231 153334 R identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III, beta subunit complement(152231..153334) Candidatus Riesia pediculicola USDA 9112143 YP_003603033.1 CDS rpmH NC_014109.1 154016 154171 D identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; ribosomal protein L34 154016..154171 Candidatus Riesia pediculicola USDA 9111744 YP_003603034.1 CDS rnpA NC_014109.1 154168 154518 D identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 154168..154518 Candidatus Riesia pediculicola USDA 9112000 YP_003603035.1 CDS RIEPE_0157 NC_014109.1 154482 154697 D identified by match to protein family HMM PF01809; protein YidD 154482..154697 Candidatus Riesia pediculicola USDA 9112158 YP_003603036.1 CDS RIEPE_0158 NC_014109.1 154750 156393 D identified by match to protein family HMM PF02096; inner membrane protein OxaA 154750..156393 Candidatus Riesia pediculicola USDA 9111877 YP_003603037.1 CDS trmE NC_014109.1 156456 157853 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; match to protein family HMM TIGR00650; tRNA modification GTPase TrmE 156456..157853 Candidatus Riesia pediculicola USDA 9112178 YP_003603038.1 CDS RIEPE_0160 NC_014109.1 157911 158399 R identified by match to protein family HMM PF03350; match to protein family HMM TIGR00645; hypothetical protein complement(157911..158399) Candidatus Riesia pediculicola USDA 9111800 YP_003603039.1 CDS RIEPE_0161 NC_014109.1 158545 160413 R identified by match to protein family HMM PF00639; ppic-type ppiase domain protein complement(158545..160413) Candidatus Riesia pediculicola USDA 9111756 YP_003603040.1 CDS lon NC_014109.1 160535 162889 R identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La complement(160535..162889) Candidatus Riesia pediculicola USDA 9112001 YP_003603041.1 CDS clpX NC_014109.1 163007 164269 R identified by match to protein family HMM PF00004; match to protein family HMM PF06689; match to protein family HMM PF07724; match to protein family HMM TIGR00382; ATP-dependent Clp protease, ATP-binding subunit ClpX complement(163007..164269) Candidatus Riesia pediculicola USDA 9112183 YP_003603042.1 CDS clpP NC_014109.1 164351 164941 R identified by match to protein family HMM PF00574; match to protein family HMM TIGR00493; ATP-dependent Clp protease, proteolytic subunit ClpP complement(164351..164941) Candidatus Riesia pediculicola USDA 9111961 YP_003603043.1 CDS RIEPE_0165 NC_014109.1 164935 165072 D identified by glimmer; putative; hypothetical protein 164935..165072 Candidatus Riesia pediculicola USDA 9111908 YP_003603044.1 CDS cyoA NC_014109.1 166045 166890 D identified by match to protein family HMM PF00116; match to protein family HMM PF06481; match to protein family HMM TIGR01433; ubiquinol oxidase, subunit II 166045..166890 Candidatus Riesia pediculicola USDA 9111717 YP_003603045.1 CDS cyoB NC_014109.1 167008 169023 D identified by match to protein family HMM PF00115; match to protein family HMM TIGR02843; Cytochrome o ubiquinol oxidase, subunit I 167008..169023 Candidatus Riesia pediculicola USDA 9111923 YP_003603046.1 CDS RIEPE_0168 NC_014109.1 169013 169603 D Cytochrome o ubiquinol oxidase subunit 3 169013..169603 Candidatus Riesia pediculicola USDA 9112247 YP_003603047.1 CDS RIEPE_0169 NC_014109.1 169742 169954 D identified by glimmer; putative; hypothetical protein 169742..169954 Candidatus Riesia pediculicola USDA 9112138 YP_003603048.1 CDS RIEPE_0170 NC_014109.1 169929 170786 D identified by match to protein family HMM PF01040; protoheme IX farnesyltransferase 169929..170786 Candidatus Riesia pediculicola USDA 9112059 YP_003603049.1 CDS RIEPE_0171 NC_014109.1 170826 172103 D identified by match to protein family HMM PF07690; inner membrane transport protein YajR 170826..172103 Candidatus Riesia pediculicola USDA 9112035 YP_003603050.1 CDS RIEPE_0172 NC_014109.1 172362 173270 D identified by match to protein family HMM PF00348; geranyltranstransferase 172362..173270 Candidatus Riesia pediculicola USDA 9111951 YP_003603051.1 CDS dxs NC_014109.1 173335 175194 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00204; 1-deoxy-D-xylulose-5-phosphate synthase 173335..175194 Candidatus Riesia pediculicola USDA 9111862 YP_003603052.1 CDS RIEPE_0174 NC_014109.1 175206 175622 R phosphatidylglycerophosphatase A complement(175206..175622) Candidatus Riesia pediculicola USDA 9111769 YP_003603053.1 CDS RIEPE_0175 NC_014109.1 175495 175638 D identified by glimmer; putative; hypothetical protein 175495..175638 Candidatus Riesia pediculicola USDA 9112206 YP_003603054.1 CDS nusB NC_014109.1 175761 176183 R identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB complement(175761..176183) Candidatus Riesia pediculicola USDA 9112155 YP_003603055.1 CDS ribH NC_014109.1 176205 176708 R identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114; 6,7-dimethyl-8-ribityllumazine synthase complement(176205..176708) Candidatus Riesia pediculicola USDA 9112006 YP_003603056.1 CDS ribD NC_014109.1 176793 177914 R identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD complement(176793..177914) Candidatus Riesia pediculicola USDA 9111972 YP_003603057.1 CDS RIEPE_0179 NC_014109.1 178168 178281 D identified by glimmer; putative; hypothetical protein 178168..178281 Candidatus Riesia pediculicola USDA 9111807 YP_003603058.1 CDS yajC NC_014109.1 178403 178747 R identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase, YajC subunit complement(178403..178747) Candidatus Riesia pediculicola USDA 9111816 YP_003603059.1 CDS dapE NC_014109.1 179584 180714 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01246; succinyl-diaminopimelate desuccinylase complement(179584..180714) Candidatus Riesia pediculicola USDA 9111933 YP_003603060.1 CDS RIEPE_0182 NC_014109.1 180981 183251 D identified by match to protein family HMM PF00390; match to protein family HMM PF03949; NADP-dependent malic enzyme 180981..183251 Candidatus Riesia pediculicola USDA 9111847 YP_003603061.1 CDS trmU NC_014109.1 183631 184722 D identified by match to protein family HMM PF01171; match to protein family HMM PF03054; match to protein family HMM TIGR00420; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 183631..184722 Candidatus Riesia pediculicola USDA 9112080 YP_003603062.1 CDS purB NC_014109.1 184814 186238 D identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928; adenylosuccinate lyase 184814..186238 Candidatus Riesia pediculicola USDA 9111992 YP_003603063.1 CDS RIEPE_0185 NC_014109.1 188718 188846 D identified by glimmer; putative; hypothetical protein 188718..188846 Candidatus Riesia pediculicola USDA 9112194 YP_003603064.1 CDS RIEPE_0186 NC_014109.1 189335 190636 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; NADH dehydrogenase complement(189335..190636) Candidatus Riesia pediculicola USDA 9112172 YP_003603065.1 CDS RIEPE_0187 NC_014109.1 191067 191570 R identified by match to protein family HMM PF01569; putative undecaprenyl-diphosphatase YbjG complement(191067..191570) Candidatus Riesia pediculicola USDA 9111788 YP_003603066.1 CDS infA NC_014109.1 191989 192234 R identified by match to protein family HMM PF00575; match to protein family HMM PF01176; match to protein family HMM TIGR00008; translation initiation factor IF-1 complement(191989..192234) Candidatus Riesia pediculicola USDA 9111764 YP_003603067.1 CDS gidA2 NC_014109.1 192359 193333 R identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; glucose-inhibited division protein A complement(192359..193333) Candidatus Riesia pediculicola USDA 9111748 YP_003603068.1 CDS RIEPE_0190 NC_014109.1 194327 194461 D identified by glimmer; putative; hypothetical protein 194327..194461 Candidatus Riesia pediculicola USDA 9111995 YP_003603069.1 CDS serS NC_014109.1 194795 196111 D identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; seryl-tRNA synthetase 194795..196111 Candidatus Riesia pediculicola USDA 9111937 YP_003603070.1 CDS RIEPE_0192 NC_014109.1 196268 197386 D identified by match to protein family HMM PF00266; phosphoserine aminotransferase 196268..197386 Candidatus Riesia pediculicola USDA 9111830 YP_003603071.1 CDS aroA NC_014109.1 197435 198718 D identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 197435..198718 Candidatus Riesia pediculicola USDA 9111823 YP_003603072.1 CDS RIEPE_0194 NC_014109.1 198746 198880 D identified by glimmer; putative; hypothetical protein 198746..198880 Candidatus Riesia pediculicola USDA 9111935 YP_003603073.1 CDS rpsA NC_014109.1 199092 200756 D identified by match to protein family HMM PF00575; match to protein family HMM TIGR00717; ribosomal protein S1 199092..200756 Candidatus Riesia pediculicola USDA 9111866 YP_003603074.1 CDS RIEPE_0196 NC_014109.1 200785 200922 R identified by glimmer; putative; hypothetical protein complement(200785..200922) Candidatus Riesia pediculicola USDA 9112057 YP_003603075.1 CDS RIEPE_0197 NC_014109.1 201104 201268 D identified by match to protein family HMM PF03966; hypothetical protein 201104..201268 Candidatus Riesia pediculicola USDA 9112028 YP_003603076.1 CDS RIEPE_0198 NC_014109.1 201376 202473 R identified by match to protein family HMM PF00267; match to protein family HMM TIGR03304; outer membrane protein, putative complement(201376..202473) Candidatus Riesia pediculicola USDA 9112253 YP_003603077.1 CDS asnS NC_014109.1 202629 204029 R identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00457; asparaginyl-tRNA synthetase complement(202629..204029) Candidatus Riesia pediculicola USDA 9111797 YP_003603078.1 CDS pncB NC_014109.1 204133 205335 R identified by match to protein family HMM PF04095; match to protein family HMM TIGR01514; nicotinate phosphoribosyltransferase complement(204133..205335) Candidatus Riesia pediculicola USDA 9112118 YP_003603079.1 CDS RIEPE_0201 NC_014109.1 205737 207062 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; mate efflux family protein complement(205737..207062) Candidatus Riesia pediculicola USDA 9111925 YP_003603080.1 CDS RIEPE_0202 NC_014109.1 207465 207599 D identified by glimmer; putative; hypothetical protein 207465..207599 Candidatus Riesia pediculicola USDA 9111962 YP_003603081.1 CDS hpt NC_014109.1 207556 208080 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 207556..208080 Candidatus Riesia pediculicola USDA 9111743 YP_003603082.1 CDS RIEPE_0204 NC_014109.1 208318 209247 D identified by match to protein family HMM PF00005; hypothetical ABC transporter ATP-binding protein YadG 208318..209247 Candidatus Riesia pediculicola USDA 9112003 YP_003603083.1 CDS RIEPE_0205 NC_014109.1 209262 210038 D identified by match to protein family HMM PF01061; ABC transporter, integral membrane protein YadH 209262..210038 Candidatus Riesia pediculicola USDA 9111895 YP_003603084.1 CDS folK NC_014109.1 210052 210555 R identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(210052..210555) Candidatus Riesia pediculicola USDA 9112159 YP_003603085.1 CDS dksA NC_014109.1 210699 211070 R identified by match to protein family HMM PF01258; match to protein family HMM TIGR02420; RNA polymerase-binding protein DksA complement(210699..211070) Candidatus Riesia pediculicola USDA 9112242 YP_003603086.1 CDS RIEPE_0208 NC_014109.1 212073 212420 D identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; iron-sulfur cluster assembly accessory protein 212073..212420 Candidatus Riesia pediculicola USDA 9111763 YP_003603087.1 CDS mtnN NC_014109.1 212429 213154 R identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase complement(212429..213154) Candidatus Riesia pediculicola USDA 9111887 YP_003603088.1 CDS RIEPE_0210 NC_014109.1 213195 213452 R identified by glimmer; putative; hypothetical protein complement(213195..213452) Candidatus Riesia pediculicola USDA 9112096 YP_003603089.1 CDS RIEPE_0211 NC_014109.1 213517 213675 R identified by glimmer; putative; hypothetical protein complement(213517..213675) Candidatus Riesia pediculicola USDA 9112027 YP_003603090.1 CDS pyrG NC_014109.1 213978 215663 D identified by match to protein family HMM PF00117; match to protein family HMM PF06418; match to protein family HMM TIGR00337; CTP synthase 213978..215663 Candidatus Riesia pediculicola USDA 9112137 YP_003603091.1 CDS eno NC_014109.1 215677 216987 D identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; phosphopyruvate hydratase 215677..216987 Candidatus Riesia pediculicola USDA 9112126 YP_003603092.1 CDS RIEPE_0214 NC_014109.1 217164 217940 R identified by match to protein family HMM PF00753; probable hydroxyacylglutathione hydrolase complement(217164..217940) Candidatus Riesia pediculicola USDA 9111780 YP_003603093.1 CDS rnhA NC_014109.1 218077 218577 R identified by match to protein family HMM PF00075; RNase H complement(218077..218577) Candidatus Riesia pediculicola USDA 9111723 YP_003603094.1 CDS dnaQ NC_014109.1 218613 219362 D identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573; match to protein family HMM TIGR01406; DNA polymerase III, epsilon subunit 218613..219362 Candidatus Riesia pediculicola USDA 9111934 YP_003603095.1 CDS tkt NC_014109.1 219596 221599 D identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 219596..221599 Candidatus Riesia pediculicola USDA 9112290 YP_003603096.1 CDS RIEPE_0219 NC_014109.1 221780 221929 R identified by glimmer; putative; hypothetical protein complement(221780..221929) Candidatus Riesia pediculicola USDA 9112042 YP_003603097.1 CDS pgk NC_014109.1 221921 223072 D identified by match to protein family HMM PF00162; phosphoglycerate kinase 221921..223072 Candidatus Riesia pediculicola USDA 9111811 YP_003603098.1 CDS fbaA NC_014109.1 223110 224186 D identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01520; fructose-bisphosphate aldolase, class II 223110..224186 Candidatus Riesia pediculicola USDA 9111968 YP_003603099.1 CDS glnS NC_014109.1 224654 226318 D identified by match to protein family HMM PF00749; match to protein family HMM PF03950; match to protein family HMM TIGR00440; glutaminyl-tRNA synthetase 224654..226318 Candidatus Riesia pediculicola USDA 9112293 YP_003603100.1 CDS RIEPE_0226 NC_014109.1 226407 226937 R identified by match to protein family HMM PF00258; match to protein family HMM TIGR01752; flavodoxin complement(226407..226937) Candidatus Riesia pediculicola USDA 9112073 YP_003603101.1 CDS RIEPE_0227 NC_014109.1 227461 227595 R identified by glimmer; putative; hypothetical protein complement(227461..227595) Candidatus Riesia pediculicola USDA 9112045 YP_003603102.1 CDS sdhC NC_014109.1 227995 228405 D identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970; succinate dehydrogenase, Cytochrome b556 subunit 227995..228405 Candidatus Riesia pediculicola USDA 9112189 YP_003603103.1 CDS sdhD NC_014109.1 228402 228734 D identified by match to protein family HMM TIGR02968; succinate dehydrogenase, hydrophobic membrane anchor protein 228402..228734 Candidatus Riesia pediculicola USDA 9112123 YP_003603104.1 CDS sdhA NC_014109.1 228747 230522 D identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816; succinate dehydrogenase, flavoprotein subunit 228747..230522 Candidatus Riesia pediculicola USDA 9111783 YP_003603105.1 CDS RIEPE_0231 NC_014109.1 230527 231294 D identified by match to protein family HMM TIGR00384; succinate dehydrogenase iron-sulfur protein 230527..231294 Candidatus Riesia pediculicola USDA 9111712 YP_003603106.1 CDS sucA NC_014109.1 231319 234138 D identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239; 2-oxoglutarate dehydrogenase, E1 component 231319..234138 Candidatus Riesia pediculicola USDA 9111786 YP_003603107.1 CDS sucB NC_014109.1 234147 235343 D identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM TIGR01347; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 234147..235343 Candidatus Riesia pediculicola USDA 9111916 YP_003603108.1 CDS RIEPE_0234 NC_014109.1 235382 236572 D succinyl-CoA synthetase beta chain 235382..236572 Candidatus Riesia pediculicola USDA 9111863 YP_003603109.1 CDS RIEPE_0235 NC_014109.1 236553 237422 D identified by match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019; succinyl-CoA synthetase alpha chain 236553..237422 Candidatus Riesia pediculicola USDA 9111829 YP_003603110.1 CDS RIEPE_0237 NC_014109.1 237508 238191 R identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase complement(237508..238191) Candidatus Riesia pediculicola USDA 9112291 YP_003603111.1 CDS RIEPE_0238 NC_014109.1 238458 239048 R identified by match to protein family HMM PF00578; alkyl hydroperoxide reductase subunit C complement(238458..239048) Candidatus Riesia pediculicola USDA 9111888 YP_003603112.1 CDS trx NC_014109.1 239787 240158 D identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 239787..240158 Candidatus Riesia pediculicola USDA 9112268 YP_003603113.1 CDS rho NC_014109.1 240419 241678 D identified by match to protein family HMM PF00006; match to protein family HMM PF07497; match to protein family HMM PF07498; match to protein family HMM PF08206; match to protein family HMM TIGR00767; transcription termination factor Rho 240419..241678 Candidatus Riesia pediculicola USDA 9112016 YP_003603114.1 CDS dapF NC_014109.1 242486 243328 D identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652; diaminopimelate epimerase 242486..243328 Candidatus Riesia pediculicola USDA 9112273 YP_003603115.1 CDS RIEPE_0247 NC_014109.1 243447 245402 D identified by match to protein family HMM PF00580; DNA helicase II 243447..245402 Candidatus Riesia pediculicola USDA 9112177 YP_003603116.1 CDS RIEPE_0248 NC_014109.1 245685 246515 D identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; YigL 245685..246515 Candidatus Riesia pediculicola USDA 9112231 YP_003603117.1 CDS psd NC_014109.1 246534 247382 R identified by match to protein family HMM PF02666; match to protein family HMM TIGR00163; phosphatidylserine decarboxylase complement(246534..247382) Candidatus Riesia pediculicola USDA 9111710 YP_003603118.1 CDS RIEPE_0250 NC_014109.1 247755 248309 D identified by match to protein family HMM PF00929; oligoribonuclease 247755..248309 Candidatus Riesia pediculicola USDA 9112248 YP_003603119.1 CDS RIEPE_0252 NC_014109.1 248604 248765 D identified by glimmer; putative; hypothetical protein 248604..248765 Candidatus Riesia pediculicola USDA 9112277 YP_003603120.1 CDS miaA NC_014109.1 248905 249798 D identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA delta(2)-isopentenylpyrophosphate transferase 248905..249798 Candidatus Riesia pediculicola USDA 9111792 YP_003603121.1 CDS RIEPE_0254 NC_014109.1 250178 251404 D identified by match to protein family HMM PF01145; match to protein family HMM TIGR01933; HflK 250178..251404 Candidatus Riesia pediculicola USDA 9111945 YP_003603122.1 CDS hflC NC_014109.1 251414 252418 D identified by match to protein family HMM PF01145; match to protein family HMM TIGR01932; HflC protein 251414..252418 Candidatus Riesia pediculicola USDA 9111857 YP_003603123.1 CDS purA NC_014109.1 252537 253835 D identified by match to protein family HMM PF00709; match to protein family HMM TIGR00184; adenylosuccinate synthetase 252537..253835 Candidatus Riesia pediculicola USDA 9112094 YP_003603124.1 CDS RIEPE_0257 NC_014109.1 253990 254769 D identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase, TrmH family, group 3 253990..254769 Candidatus Riesia pediculicola USDA 9112052 YP_003603125.1 CDS RIEPE_0258 NC_014109.1 254810 255220 D identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 254810..255220 Candidatus Riesia pediculicola USDA 9112249 YP_003603126.1 CDS rpsR NC_014109.1 255479 255709 D identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; ribosomal protein S18 255479..255709 Candidatus Riesia pediculicola USDA 9112051 YP_003603127.1 CDS rplI NC_014109.1 255750 256202 D identified by match to protein family HMM PF01281; match to protein family HMM TIGR00158; ribosomal protein L9 255750..256202 Candidatus Riesia pediculicola USDA 9112221 YP_003603128.1 CDS RIEPE_0262 NC_014109.1 256348 257340 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase 256348..257340 Candidatus Riesia pediculicola USDA 9111990 YP_003603129.1 CDS RIEPE_0261 NC_014109.1 257337 258035 R identified by match to protein family HMM PF00814; glycoprotease protein family, putative complement(257337..258035) Candidatus Riesia pediculicola USDA 9111832 YP_003603130.1 CDS RIEPE_0263 NC_014109.1 258878 260404 D identified by match to protein family HMM PF00883; match to protein family HMM PF02789; cytosol aminopeptidase 258878..260404 Candidatus Riesia pediculicola USDA 9111760 YP_003603131.1 CDS valS NC_014109.1 260465 263575 D identified by match to protein family HMM PF00133; match to protein family HMM TIGR00422; valyl-tRNA synthetase 260465..263575 Candidatus Riesia pediculicola USDA 9111910 YP_003603132.1 CDS RIEPE_0264 NC_014109.1 263554 265671 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polyribonucleotide nucleotidyltransferase complement(263554..265671) Candidatus Riesia pediculicola USDA 9112085 YP_003603133.1 CDS rpsO NC_014109.1 265739 265972 R identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 complement(265739..265972) Candidatus Riesia pediculicola USDA 9111930 YP_003603134.1 CDS rbfA NC_014109.1 266208 266606 R identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A complement(266208..266606) Candidatus Riesia pediculicola USDA 9111869 YP_003603135.1 CDS infB NC_014109.1 266637 268253 R identified by match to protein family HMM PF00009; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 complement(266637..268253) Candidatus Riesia pediculicola USDA 9112214 YP_003603136.1 CDS RIEPE_0269 NC_014109.1 268413 268565 R identified by glimmer; putative; hypothetical protein complement(268413..268565) Candidatus Riesia pediculicola USDA 9111790 YP_003603137.1 CDS nusA NC_014109.1 269112 270284 R identified by match to protein family HMM TIGR01953; transcription termination factor NusA complement(269112..270284) Candidatus Riesia pediculicola USDA 9111761 YP_003603138.1 CDS RIEPE_0273 NC_014109.1 270802 271152 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase, SecG subunit complement(270802..271152) Candidatus Riesia pediculicola USDA 9112286 YP_003603139.1 CDS RIEPE_0274 NC_014109.1 271282 272634 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucosamine mutase complement(271282..272634) Candidatus Riesia pediculicola USDA 9112076 YP_003603140.1 CDS folP NC_014109.1 272654 273475 R identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase complement(272654..273475) Candidatus Riesia pediculicola USDA 9111979 YP_003603141.1 CDS hflB NC_014109.1 273536 275353 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metallopeptidase HflB complement(273536..275353) Candidatus Riesia pediculicola USDA 9112019 YP_003603142.1 CDS rrmJ NC_014109.1 275403 275888 R identified by match to protein family HMM PF01728; ribosomal RNA large subunit methyltransferase J complement(275403..275888) Candidatus Riesia pediculicola USDA 9112058 YP_003603143.1 CDS RIEPE_0278 NC_014109.1 276303 276791 R identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor complement(276303..276791) Candidatus Riesia pediculicola USDA 9112162 YP_003603144.1 CDS RIEPE_0279 NC_014109.1 276770 276883 D identified by glimmer; putative; hypothetical protein 276770..276883 Candidatus Riesia pediculicola USDA 9111802 YP_003603145.1 CDS RIEPE_0280 NC_014109.1 276909 277028 R identified by glimmer; putative; hypothetical protein complement(276909..277028) Candidatus Riesia pediculicola USDA 9111918 YP_003603146.1 CDS RIEPE_0281 NC_014109.1 277249 278262 R identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM TIGR02729; GTP-binding protein Obg/CgtA complement(277249..278262) Candidatus Riesia pediculicola USDA 9111742 YP_003603147.1 CDS rpmA NC_014109.1 278296 278571 R identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; ribosomal protein L27 complement(278296..278571) Candidatus Riesia pediculicola USDA 9112125 YP_003603148.1 CDS rplU NC_014109.1 278587 278898 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; ribosomal protein L21 complement(278587..278898) Candidatus Riesia pediculicola USDA 9112071 YP_003603149.1 CDS RIEPE_0284 NC_014109.1 279086 280042 D identified by match to protein family HMM PF00348; octaprenyl-diphosphate synthase 279086..280042 Candidatus Riesia pediculicola USDA 9112107 YP_003603150.1 CDS RIEPE_0285 NC_014109.1 280782 280907 D identified by glimmer; putative; hypothetical protein 280782..280907 Candidatus Riesia pediculicola USDA 9112036 YP_003603151.1 CDS ppa NC_014109.1 281015 281557 D identified by match to protein family HMM PF00719; inorganic pyrophosphatase 281015..281557 Candidatus Riesia pediculicola USDA 9111984 YP_003603152.1 CDS RIEPE_0287 NC_014109.1 281776 281910 R identified by glimmer; putative; hypothetical protein complement(281776..281910) Candidatus Riesia pediculicola USDA 9111850 YP_003603153.1 CDS RIEPE_0288 NC_014109.1 281902 282549 D identified by match to protein family HMM PF00730; endonuclease III (DNA-(apurinic or apyrimidinic site)lyase) 281902..282549 Candidatus Riesia pediculicola USDA 9111775 YP_003603154.1 CDS RIEPE_0289 NC_014109.1 282787 282978 R identified by glimmer; putative; hypothetical protein complement(282787..282978) Candidatus Riesia pediculicola USDA 9111808 YP_003603155.1 CDS ribA NC_014109.1 283069 283653 D identified by match to protein family HMM PF00925; match to protein family HMM TIGR00505; GTP cyclohydrolase II 283069..283653 Candidatus Riesia pediculicola USDA 9111880 YP_003603156.1 CDS RIEPE_0291 NC_014109.1 283840 284820 R identified by match to protein family HMM PF01343; probable protease SohB complement(283840..284820) Candidatus Riesia pediculicola USDA 9111920 YP_003603157.1 CDS RIEPE_0292 NC_014109.1 284930 285667 D identified by match to protein family HMM PF00106; short chain dehydrogenase 284930..285667 Candidatus Riesia pediculicola USDA 9111977 YP_003603158.1 CDS RIEPE_0293 NC_014109.1 286170 286931 D identified by match to protein family HMM PF06790; hypothetical protein 286170..286931 Candidatus Riesia pediculicola USDA 9112074 YP_003603159.1 CDS RIEPE_0294 NC_014109.1 286994 287152 D hypothetical protein 286994..287152 Candidatus Riesia pediculicola USDA 9112168 YP_003603160.1 CDS RIEPE_0295 NC_014109.1 287198 287362 D identified by glimmer; putative; hypothetical protein 287198..287362 Candidatus Riesia pediculicola USDA 9112210 YP_003603161.1 CDS RIEPE_0296 NC_014109.1 287427 288443 D identified by match to protein family HMM PF00614; cardiolipin synthetase 287427..288443 Candidatus Riesia pediculicola USDA 9112193 YP_003603162.1 CDS secA NC_014109.1 288527 291067 R identified by match to protein family HMM PF01043; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; preprotein translocase, SecA subunit complement(288527..291067) Candidatus Riesia pediculicola USDA 9112181 YP_003603163.1 CDS RIEPE_0298 NC_014109.1 291323 291811 D hypothetical protein 291323..291811 Candidatus Riesia pediculicola USDA 9111873 YP_003603164.1 CDS RIEPE_0300 NC_014109.1 292163 293014 D identified by match to protein family HMM PF00763; match to protein family HMM PF02882; FolD bifunctional protein 292163..293014 Candidatus Riesia pediculicola USDA 9112263 YP_003603165.1 CDS cysS NC_014109.1 293042 294451 R identified by match to protein family HMM PF01406; match to protein family HMM TIGR00435; cysteinyl-tRNA synthetase complement(293042..294451) Candidatus Riesia pediculicola USDA 9111915 YP_003603166.1 CDS RIEPE_0302 NC_014109.1 294799 294951 R identified by glimmer; putative; hypothetical protein complement(294799..294951) Candidatus Riesia pediculicola USDA 9112170 YP_003603167.1 CDS RIEPE_0303 NC_014109.1 295083 295280 R identified by glimmer; putative; hypothetical protein complement(295083..295280) Candidatus Riesia pediculicola USDA 9111859 YP_003603168.1 CDS RIEPE_0304 NC_014109.1 295378 296595 D identified by match to protein family HMM PF00999; inner membrane protein YbaL 295378..296595 Candidatus Riesia pediculicola USDA 9111948 YP_003603169.1 CDS RIEPE_0305 NC_014109.1 296697 297380 R identified by match to protein family HMM PF00406; match to protein family HMM PF05191; adenylate kinase complement(296697..297380) Candidatus Riesia pediculicola USDA 9111814 YP_003603170.1 CDS RIEPE_0306 NC_014109.1 297439 299343 R identified by match to protein family HMM PF00183; match to protein family HMM PF02518; chaperone protein HtpG complement(297439..299343) Candidatus Riesia pediculicola USDA 9111867 YP_003603171.1 CDS dnaX NC_014109.1 299978 301111 R identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III, subunits gamma and tau complement(299978..301111) Candidatus Riesia pediculicola USDA 9111954 YP_003603172.1 CDS RIEPE_0308 NC_014109.1 301716 301856 D identified by glimmer; putative; hypothetical protein 301716..301856 Candidatus Riesia pediculicola USDA 9111902 YP_003603173.1 CDS argS NC_014109.1 301941 303695 R identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginyl-tRNA synthetase complement(301941..303695) Candidatus Riesia pediculicola USDA 9112046 YP_003603174.1 CDS RIEPE_0310 NC_014109.1 303845 304843 R identified by match to protein family HMM PF08003; hypothetical protein complement(303845..304843) Candidatus Riesia pediculicola USDA 9112092 YP_003603175.1 CDS RIEPE_0311 NC_014109.1 304847 305581 R identified by match to protein family HMM TIGR00740; methyltransferase, putative complement(304847..305581) Candidatus Riesia pediculicola USDA 9112152 YP_003603176.1 CDS aspS NC_014109.1 305871 307586 D identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM TIGR00459; aspartyl-tRNA synthetase 305871..307586 Candidatus Riesia pediculicola USDA 9111852 YP_003603177.1 CDS ruvC NC_014109.1 307907 308440 D identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC 307907..308440 Candidatus Riesia pediculicola USDA 9111803 YP_003603178.1 CDS groS NC_014109.1 308792 309085 D identified by match to protein family HMM PF00166; chaperonin GroS 308792..309085 Candidatus Riesia pediculicola USDA 9111737 YP_003603179.1 CDS groL NC_014109.1 309134 310771 D identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348; chaperonin GroL 309134..310771 Candidatus Riesia pediculicola USDA 9112037 YP_003603180.1 CDS RIEPE_0316 NC_014109.1 310943 311515 D identified by match to protein family HMM PF01132; match to protein family HMM PF08207; elongation factor P 310943..311515 Candidatus Riesia pediculicola USDA 9111844 YP_003603181.1 CDS smpB NC_014109.1 311916 312404 R identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086; SsrA-binding protein complement(311916..312404) Candidatus Riesia pediculicola USDA 9112260 YP_003603182.1 CDS RIEPE_0319 NC_014109.1 312856 313779 R identified by match to protein family HMM PF01513; probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) complement(312856..313779) Candidatus Riesia pediculicola USDA 9111998 YP_003603183.1 CDS grpE NC_014109.1 313861 314496 D identified by match to protein family HMM PF01025; co-chaperone GrpE 313861..314496 Candidatus Riesia pediculicola USDA 9111765 YP_003603184.1 CDS ung NC_014109.1 314476 315180 R identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628; uracil-DNA glycosylase complement(314476..315180) Candidatus Riesia pediculicola USDA 9111890 YP_003603185.1 CDS lepA NC_014109.1 315345 317168 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF06421; match to protein family HMM TIGR00231; match to protein family HMM TIGR01393; GTP-binding protein LepA 315345..317168 Candidatus Riesia pediculicola USDA 9112141 YP_003603186.1 CDS lepB NC_014109.1 317184 318125 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 317184..318125 Candidatus Riesia pediculicola USDA 9112030 YP_003603187.1 CDS rnc NC_014109.1 318249 318932 D identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III 318249..318932 Candidatus Riesia pediculicola USDA 9112032 YP_003603188.1 CDS pdxJ NC_014109.1 319095 319853 D identified by match to protein family HMM PF03740; match to protein family HMM TIGR00559; pyridoxal phosphate biosynthetic protein PdxJ 319095..319853 Candidatus Riesia pediculicola USDA 9111927 YP_003603189.1 CDS acpS NC_014109.1 319810 320214 D identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556; holo-(acyl-carrier-protein) synthase 319810..320214 Candidatus Riesia pediculicola USDA 9111897 YP_003603190.1 CDS RIEPE_0327 NC_014109.1 320235 320435 R identified by match to protein family HMM PF00037; NapF protein complement(320235..320435) Candidatus Riesia pediculicola USDA 9111821 YP_003603191.1 CDS RIEPE_0328 NC_014109.1 320546 321061 D identified by match to protein family HMM PF00383; tRNA-specific adenosine deaminase 320546..321061 Candidatus Riesia pediculicola USDA 9111784 YP_003603192.1 CDS RIEPE_0329 NC_014109.1 321090 321230 D identified by glimmer; putative; hypothetical protein 321090..321230 Candidatus Riesia pediculicola USDA 9112228 YP_003603193.1 CDS RIEPE_0330 NC_014109.1 321220 322854 D identified by match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM TIGR00552; NAD+ synthetase 321220..322854 Candidatus Riesia pediculicola USDA 9112142 YP_003603194.1 CDS glyA NC_014109.1 323012 324271 D identified by match to protein family HMM PF00464; serine hydroxymethyltransferase 323012..324271 Candidatus Riesia pediculicola USDA 9112077 YP_003603195.1 CDS RIEPE_0332 NC_014109.1 324321 325481 D identified by match to protein family HMM PF07690; probable 3-phenylpropionic acid transporter 324321..325481 Candidatus Riesia pediculicola USDA 9112088 YP_003603196.1 CDS RIEPE_0333 NC_014109.1 325538 326422 R identified by match to protein family HMM PF00459; inositol-1-monophosphatase complement(325538..326422) Candidatus Riesia pediculicola USDA 9112217 YP_003603197.1 CDS RIEPE_0334 NC_014109.1 326514 326642 R identified by glimmer; putative; hypothetical protein complement(326514..326642) Candidatus Riesia pediculicola USDA 9112204 YP_003603198.1 CDS RIEPE_0335 NC_014109.1 327014 327133 D identified by glimmer; putative; hypothetical protein 327014..327133 Candidatus Riesia pediculicola USDA 9112130 YP_003603199.1 CDS RIEPE_0336 NC_014109.1 327123 328193 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; radical SAM enzyme, Cfr family 327123..328193 Candidatus Riesia pediculicola USDA 9111751 YP_003603200.1 CDS ispG NC_014109.1 328510 329655 D identified by match to protein family HMM PF04551; match to protein family HMM TIGR00612; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 328510..329655 Candidatus Riesia pediculicola USDA 9111965 YP_003603201.1 CDS hisS NC_014109.1 329657 330964 D identified by match to protein family HMM PF00587; match to protein family HMM TIGR00442; histidyl-tRNA synthetase 329657..330964 Candidatus Riesia pediculicola USDA 9111911 YP_003603202.1 CDS RIEPE_0339 NC_014109.1 331028 331606 D identified by match to protein family HMM PF07719; tetratricopeptide repeat domain protein 331028..331606 Candidatus Riesia pediculicola USDA 9112111 YP_003603203.1 CDS RIEPE_0340 NC_014109.1 331771 333195 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650; GTP-binding protein EngA 331771..333195 Candidatus Riesia pediculicola USDA 9112187 YP_003603204.1 CDS coaE NC_014109.1 333231 333875 R identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase complement(333231..333875) Candidatus Riesia pediculicola USDA 9112145 YP_003603205.1 CDS proS NC_014109.1 339293 341044 D identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00409; prolyl-tRNA synthetase 339293..341044 Candidatus Riesia pediculicola USDA 9112259 YP_003603206.1 CDS RIEPE_0348 NC_014109.1 341132 342496 R identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) complement(341132..342496) Candidatus Riesia pediculicola USDA 9111806 YP_003603207.1 CDS accA NC_014109.1 342600 343562 R identified by match to protein family HMM PF03255; match to protein family HMM TIGR00513; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit complement(342600..343562) Candidatus Riesia pediculicola USDA 9112246 YP_003603208.1 CDS RIEPE_0350 NC_014109.1 343569 347102 R identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III alpha subunit complement(343569..347102) Candidatus Riesia pediculicola USDA 9111943 YP_003603209.1 CDS fabZ NC_014109.1 348018 348470 R identified by match to protein family HMM PF07977; match to protein family HMM TIGR01750; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ complement(348018..348470) Candidatus Riesia pediculicola USDA 9111901 YP_003603210.1 CDS RIEPE_0352 NC_014109.1 349223 349399 D identified by glimmer; putative; hypothetical protein 349223..349399 Candidatus Riesia pediculicola USDA 9111974 YP_003603211.1 CDS RIEPE_0353 NC_014109.1 349503 351899 R identified by match to protein family HMM PF01103; match to protein family HMM PF07244; outer membrane protein assembly factor YaeT, putative complement(349503..351899) Candidatus Riesia pediculicola USDA 9112033 YP_003603212.1 CDS RIEPE_0355 NC_014109.1 352168 352359 D identified by glimmer; putative; hypothetical protein 352168..352359 Candidatus Riesia pediculicola USDA 9112120 YP_003603213.1 CDS cdsA NC_014109.1 352356 353267 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(352356..353267) Candidatus Riesia pediculicola USDA 9112127 YP_003603214.1 CDS uppS NC_014109.1 353242 354000 R identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase complement(353242..354000) Candidatus Riesia pediculicola USDA 9112213 YP_003603215.1 CDS dxr NC_014109.1 354055 355263 R identified by match to protein family HMM PF02670; match to protein family HMM TIGR00243; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(354055..355263) Candidatus Riesia pediculicola USDA 9112229 YP_003603216.1 CDS frr NC_014109.1 355328 355885 R identified by match to protein family HMM PF01765; ribosome recycling factor complement(355328..355885) Candidatus Riesia pediculicola USDA 9112014 YP_003603217.1 CDS pyrH NC_014109.1 355857 356657 R identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; uridylate kinase complement(355857..356657) Candidatus Riesia pediculicola USDA 9112061 YP_003603218.1 CDS tsf NC_014109.1 356822 357610 R identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; translation elongation factor Ts complement(356822..357610) Candidatus Riesia pediculicola USDA 9112034 YP_003603219.1 CDS rpsB NC_014109.1 357678 358409 R identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 complement(357678..358409) Candidatus Riesia pediculicola USDA 9111963 YP_003603220.1 CDS map NC_014109.1 358746 359519 D identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase, type I 358746..359519 Candidatus Riesia pediculicola USDA 9112156 YP_003603221.1 CDS dapD NC_014109.1 359652 360515 D identified by match to protein family HMM PF00132; match to protein family HMM TIGR00965; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 359652..360515 Candidatus Riesia pediculicola USDA 9112098 YP_003603222.1 CDS RIEPE_0364 NC_014109.1 360560 361759 R identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase AmiC complement(360560..361759) Candidatus Riesia pediculicola USDA 9111794 YP_003603223.1 CDS RIEPE_0365 NC_014109.1 361958 362077 D identified by glimmer; putative; hypothetical protein 361958..362077 Candidatus Riesia pediculicola USDA 9111733 YP_003603224.1 CDS thyA NC_014109.1 362610 363461 R identified by match to protein family HMM PF00303; thymidylate synthase complement(362610..363461) Candidatus Riesia pediculicola USDA 9111840 YP_003603225.1 CDS lgt NC_014109.1 363499 364350 R identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase complement(363499..364350) Candidatus Riesia pediculicola USDA 9112064 YP_003603226.1 CDS RIEPE_0368 NC_014109.1 364612 364773 D identified by glimmer; putative; hypothetical protein 364612..364773 Candidatus Riesia pediculicola USDA 9111987 YP_003603227.1 CDS RIEPE_0369 NC_014109.1 364797 365771 D identified by match to protein family HMM TIGR01254; thiamine-binding periplasmic protein 364797..365771 Candidatus Riesia pediculicola USDA 9112251 YP_003603228.1 CDS thiP NC_014109.1 365747 367351 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01253; thiamine/thiamine pyrophosphate ABC transporter, permease protein 365747..367351 Candidatus Riesia pediculicola USDA 9111729 YP_003603229.1 CDS RIEPE_0371 NC_014109.1 367344 368000 D identified by match to protein family HMM PF00005; thiamine transport ATP-binding protein ThiQ 367344..368000 Candidatus Riesia pediculicola USDA 9111787 YP_003603230.1 CDS RIEPE_0372 NC_014109.1 367972 368088 D identified by glimmer; putative; hypothetical protein 367972..368088 Candidatus Riesia pediculicola USDA 9111921 YP_003603231.1 CDS RIEPE_0373 NC_014109.1 368136 368933 R identified by match to protein family HMM PF00226; DnaJ domain protein complement(368136..368933) Candidatus Riesia pediculicola USDA 9111812 YP_003603232.1 CDS pdxA NC_014109.1 370411 371433 D identified by match to protein family HMM PF04166; match to protein family HMM TIGR00557; 4-hydroxythreonine-4-phosphate dehydrogenase 370411..371433 Candidatus Riesia pediculicola USDA 9112065 YP_003603233.1 CDS ksgA NC_014109.1 371448 372239 D identified by match to protein family HMM PF00398; match to protein family HMM TIGR00755; dimethyladenosine transferase 371448..372239 Candidatus Riesia pediculicola USDA 9111973 YP_003603234.1 CDS RIEPE_0376 NC_014109.1 372329 373213 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00668; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 372329..373213 Candidatus Riesia pediculicola USDA 9112190 YP_003603235.1 CDS folA NC_014109.1 373216 373728 R identified by match to protein family HMM PF00186; dihydrofolate reductase complement(373216..373728) Candidatus Riesia pediculicola USDA 9111970 YP_003603236.1 CDS RIEPE_0378 NC_014109.1 373852 374586 R identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(373852..374586) Candidatus Riesia pediculicola USDA 9112114 YP_003603237.1 CDS RIEPE_0379 NC_014109.1 374926 375042 D identified by glimmer; putative; hypothetical protein 374926..375042 Candidatus Riesia pediculicola USDA 9112002 YP_003603238.1 CDS ribB NC_014109.1 375077 375724 R identified by match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(375077..375724) Candidatus Riesia pediculicola USDA 9112208 YP_003603239.1 CDS RIEPE_0381 NC_014109.1 375933 376190 D putative cytoplasmic protein 375933..376190 Candidatus Riesia pediculicola USDA 9112140 YP_003603240.1 CDS tpiA NC_014109.1 376216 376998 R identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419; triosephosphate isomerase complement(376216..376998) Candidatus Riesia pediculicola USDA 9112239 YP_003603241.1 CDS RIEPE_0384 NC_014109.1 377011 377145 D identified by glimmer; putative; hypothetical protein 377011..377145 Candidatus Riesia pediculicola USDA 9112171 YP_003603242.1 CDS RIEPE_0383 NC_014109.1 377123 377896 R identified by match to protein family HMM PF00175; ferredoxin--NADP reductase complement(377123..377896) Candidatus Riesia pediculicola USDA 9111928 YP_003603243.1 CDS RIEPE_0385 NC_014109.1 378004 379551 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; glycerol kinase complement(378004..379551) Candidatus Riesia pediculicola USDA 9111837 YP_003603244.1 CDS hslU NC_014109.1 379811 381148 R identified by match to protein family HMM PF07724; match to protein family HMM TIGR00390; heat shock protein HslVU, ATPase subunit HslU complement(379811..381148) Candidatus Riesia pediculicola USDA 9111957 YP_003603245.1 CDS RIEPE_0387 NC_014109.1 381160 381690 R identified by match to protein family HMM PF00227; ATP-dependent protease HslV complement(381160..381690) Candidatus Riesia pediculicola USDA 9112038 YP_003603246.1 CDS priA NC_014109.1 382080 383669 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM TIGR00595; primosomal protein N' complement(382080..383669) Candidatus Riesia pediculicola USDA 9112225 YP_003603247.1 CDS RIEPE_0389 NC_014109.1 383750 384274 R primosomal protein N' complement(383750..384274) Candidatus Riesia pediculicola USDA 9111766 YP_003603248.1 CDS rpmE NC_014109.1 384415 384633 D identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; ribosomal protein L31 384415..384633 Candidatus Riesia pediculicola USDA 9112089 YP_003603249.1 CDS RIEPE_0391 NC_014109.1 385120 386940 R identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease E complement(385120..386940) Candidatus Riesia pediculicola USDA 9112146 YP_003603250.1 CDS RIEPE_0392 NC_014109.1 387293 388288 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase C 387293..388288 Candidatus Riesia pediculicola USDA 9111953 YP_003603251.1 CDS rpmF NC_014109.1 388576 388740 D identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; ribosomal protein L32 388576..388740 Candidatus Riesia pediculicola USDA 9112024 YP_003603252.1 CDS RIEPE_0394 NC_014109.1 389275 390228 D identified by match to protein family HMM TIGR00747; 3-oxoacyl-[acyl-carrier-protein] synthase 3 389275..390228 Candidatus Riesia pediculicola USDA 9111825 YP_003603253.1 CDS fabD NC_014109.1 390201 391187 D identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 390201..391187 Candidatus Riesia pediculicola USDA 9111858 YP_003603254.1 CDS RIEPE_0396 NC_014109.1 391189 391923 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; 3-oxoacyl-[acyl-carrier-protein] reductase 391189..391923 Candidatus Riesia pediculicola USDA 9112235 YP_003603255.1 CDS acpP NC_014109.1 392009 392278 D identified by match to protein family HMM PF00550; match to protein family HMM TIGR00517; acyl carrier protein 392009..392278 Candidatus Riesia pediculicola USDA 9111980 YP_003603256.1 CDS RIEPE_0398 NC_014109.1 392475 393308 D identified by match to protein family HMM PF01063; match to protein family HMM TIGR03461; aminodeoxychorismate lyase 392475..393308 Candidatus Riesia pediculicola USDA 9111996 YP_003603257.1 CDS tmk NC_014109.1 393577 394230 D identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; thymidylate kinase 393577..394230 Candidatus Riesia pediculicola USDA 9111917 YP_003603258.1 CDS RIEPE_0400 NC_014109.1 394244 395236 D DNA polymerase III delta' subunit 394244..395236 Candidatus Riesia pediculicola USDA 9112165 YP_003603259.1 CDS RIEPE_0401 NC_014109.1 395246 396046 D identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; Mg-dependent DNase 395246..396046 Candidatus Riesia pediculicola USDA 9112078 YP_003603260.1 CDS RIEPE_0402 NC_014109.1 396054 396416 D identified by match to protein family HMM PF01230; Hit family protein 396054..396416 Candidatus Riesia pediculicola USDA 9111759 YP_003603261.1 CDS RIEPE_0403 NC_014109.1 396602 397957 D identified by match to protein family HMM PF00614; CDP-diacylglycerol--serine O-phosphatidyltransferase 396602..397957 Candidatus Riesia pediculicola USDA 9112252 YP_003603262.1 CDS rpoC NC_014109.1 397970 402148 R identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase, beta' subunit complement(397970..402148) Candidatus Riesia pediculicola USDA 9111720 YP_003603263.1 CDS rpoB NC_014109.1 402228 406256 R identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase, beta subunit complement(402228..406256) Candidatus Riesia pediculicola USDA 9111839 YP_003603264.1 CDS rplL NC_014109.1 406434 406808 R identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; ribosomal protein L7/L12 complement(406434..406808) Candidatus Riesia pediculicola USDA 9111903 YP_003603265.1 CDS RIEPE_0407 NC_014109.1 406862 407365 R identified by match to protein family HMM PF00466; 50S ribosomal protein L10 complement(406862..407365) Candidatus Riesia pediculicola USDA 9111730 YP_003603266.1 CDS rplA NC_014109.1 407545 408249 R identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; ribosomal protein L1 complement(407545..408249) Candidatus Riesia pediculicola USDA 9111762 YP_003603267.1 CDS rplK NC_014109.1 408246 408782 R identified by match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632; 50S ribosomal protein L11 complement(408246..408782) Candidatus Riesia pediculicola USDA 9111986 YP_003603268.1 CDS nusG NC_014109.1 408748 409296 R identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG complement(408748..409296) Candidatus Riesia pediculicola USDA 9111905 YP_003603269.1 CDS RIEPE_0411 NC_014109.1 409298 409687 R identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; preprotein translocase SecE subunit complement(409298..409687) Candidatus Riesia pediculicola USDA 9112115 YP_003603270.1 CDS tuf NC_014109.1 409815 410999 R identified by match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00485; translation elongation factor Tu complement(409815..410999) Candidatus Riesia pediculicola USDA 9112109 YP_003603271.1 CDS RIEPE_0416 NC_014109.1 411806 412618 D identified by match to protein family HMM PF00485; pantothenate kinase 411806..412618 Candidatus Riesia pediculicola USDA 9112279 YP_003603272.1 CDS RIEPE_0417 NC_014109.1 412673 413329 R identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin-[acetyl-CoA-carboxylase] ligase complement(412673..413329) Candidatus Riesia pediculicola USDA 9111842 YP_003603273.1 CDS murB NC_014109.1 413410 414405 R identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179; UDP-N-acetylenolpyruvoylglucosamine reductase complement(413410..414405) Candidatus Riesia pediculicola USDA 9112154 YP_003603274.1 CDS RIEPE_0419 NC_014109.1 414588 414725 R identified by glimmer; putative; hypothetical protein complement(414588..414725) Candidatus Riesia pediculicola USDA 9111752 YP_003603275.1 CDS aroE NC_014109.1 414783 415619 R identified by match to protein family HMM PF01488; match to protein family HMM TIGR00507; shikimate 5-dehydrogenase complement(414783..415619) Candidatus Riesia pediculicola USDA 9112132 YP_003603276.1 CDS RIEPE_0421 NC_014109.1 415623 416186 R identified by match to protein family HMM PF01300; protein YrdC complement(415623..416186) Candidatus Riesia pediculicola USDA 9112161 YP_003603277.1 CDS def NC_014109.1 416454 416909 D identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 416454..416909 Candidatus Riesia pediculicola USDA 9112008 YP_003603278.1 CDS fmt NC_014109.1 416941 417903 D identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 416941..417903 Candidatus Riesia pediculicola USDA 9112070 YP_003603279.1 CDS RIEPE_0425 NC_014109.1 418260 419630 D identified by match to protein family HMM PF02080; match to protein family HMM PF02254; Trk system potassium uptake protein TrkA (K(+)-uptake protein trkA) 418260..419630 Candidatus Riesia pediculicola USDA 9111848 YP_003603280.1 CDS rplQ NC_014109.1 419627 420010 R identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059; ribosomal protein L17 complement(419627..420010) Candidatus Riesia pediculicola USDA 9112103 YP_003603281.1 CDS rpoA NC_014109.1 420048 421082 R identified by match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027; DNA-directed RNA polymerase, alpha subunit complement(420048..421082) Candidatus Riesia pediculicola USDA 9111896 YP_003603282.1 CDS rpsD NC_014109.1 421060 421680 R identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 complement(421060..421680) Candidatus Riesia pediculicola USDA 9112022 YP_003603283.1 CDS rpsK NC_014109.1 421709 422152 R identified by match to protein family HMM PF00411; 30S ribosomal protein S11 complement(421709..422152) Candidatus Riesia pediculicola USDA 9112232 YP_003603284.1 CDS rpsM NC_014109.1 422109 422468 R identified by match to protein family HMM PF00416; 30S ribosomal protein S13 complement(422109..422468) Candidatus Riesia pediculicola USDA 9112240 YP_003603285.1 CDS RIEPE_0430 NC_014109.1 422683 424011 R identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase, SecY subunit complement(422683..424011) Candidatus Riesia pediculicola USDA 9112201 YP_003603286.1 CDS rplO NC_014109.1 424015 424458 R identified by match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 complement(424015..424458) Candidatus Riesia pediculicola USDA 9111886 YP_003603287.1 CDS rpsE NC_014109.1 424546 425070 R identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 complement(424546..425070) Candidatus Riesia pediculicola USDA 9111801 YP_003603288.1 CDS rplR NC_014109.1 425073 425429 R identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 complement(425073..425429) Candidatus Riesia pediculicola USDA 9112017 YP_003603289.1 CDS RIEPE_0434 NC_014109.1 425440 425967 R identified by match to protein family HMM PF00347; 50S ribosomal protein L6 complement(425440..425967) Candidatus Riesia pediculicola USDA 9112100 YP_003603290.1 CDS rpsH NC_014109.1 426001 426399 R identified by match to protein family HMM PF00410; 30S ribosomal protein S8 complement(426001..426399) Candidatus Riesia pediculicola USDA 9111865 YP_003603291.1 CDS RIEPE_0436 NC_014109.1 426454 426759 R identified by match to protein family HMM PF00253; 30S ribosomal protein S14 complement(426454..426759) Candidatus Riesia pediculicola USDA 9112020 YP_003603292.1 CDS RIEPE_0437 NC_014109.1 426771 427355 R identified by match to protein family HMM PF00281; match to protein family HMM PF00673; 50S ribosomal protein L5 complement(426771..427355) Candidatus Riesia pediculicola USDA 9112153 YP_003603293.1 CDS rplX NC_014109.1 427357 427638 R ribosomal protein L24 complement(427357..427638) Candidatus Riesia pediculicola USDA 9112121 YP_003603294.1 CDS rplN NC_014109.1 427660 428031 R identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067; 50S ribosomal protein L14 complement(427660..428031) Candidatus Riesia pediculicola USDA 9111747 YP_003603295.1 CDS rpS NC_014109.1 428056 428346 R identified by match to protein family HMM PF00366; 30S ribosomal protein S17 complement(428056..428346) Candidatus Riesia pediculicola USDA 9111912 YP_003603296.1 CDS rpmC NC_014109.1 428333 428545 R identified by match to protein family HMM TIGR00012; ribosomal protein L29 complement(428333..428545) Candidatus Riesia pediculicola USDA 9112215 YP_003603297.1 CDS rplP NC_014109.1 428547 428951 R identified by match to protein family HMM PF00252; match to protein family HMM TIGR01164; 50S ribosomal protein L16 complement(428547..428951) Candidatus Riesia pediculicola USDA 9111997 YP_003603298.1 CDS rpsC NC_014109.1 428961 429659 R identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 complement(428961..429659) Candidatus Riesia pediculicola USDA 9111767 YP_003603299.1 CDS rplV NC_014109.1 429679 430011 R identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 complement(429679..430011) Candidatus Riesia pediculicola USDA 9111836 YP_003603300.1 CDS rpsS NC_014109.1 430024 430308 R identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050; ribosomal protein S19 complement(430024..430308) Candidatus Riesia pediculicola USDA 9111868 YP_003603301.1 CDS rplB NC_014109.1 430322 431137 R identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171; ribosomal protein L2 complement(430322..431137) Candidatus Riesia pediculicola USDA 9111931 YP_003603302.1 CDS rplW NC_014109.1 431155 431454 R identified by match to protein family HMM PF00276; ribosomal protein L23 complement(431155..431454) Candidatus Riesia pediculicola USDA 9112224 YP_003603303.1 CDS rplD NC_014109.1 431456 432064 R identified by match to protein family HMM PF00573; ribosomal protein L4/L1 family complement(431456..432064) Candidatus Riesia pediculicola USDA 9112157 YP_003603304.1 CDS rplC NC_014109.1 432092 432718 R identified by match to protein family HMM PF00297; 50S ribosomal protein L3 complement(432092..432718) Candidatus Riesia pediculicola USDA 9111860 YP_003603305.1 CDS rpsJ NC_014109.1 432740 433051 R identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049; ribosomal protein S10 complement(432740..433051) Candidatus Riesia pediculicola USDA 9112041 YP_003603306.1 CDS fusA NC_014109.1 433394 435553 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G complement(433394..435553) Candidatus Riesia pediculicola USDA 9111958 YP_003603307.1 CDS rpsG NC_014109.1 435578 436048 R identified by match to protein family HMM PF00177; match to protein family HMM TIGR01029; 30S ribosomal protein S7 complement(435578..436048) Candidatus Riesia pediculicola USDA 9111894 YP_003603308.1 CDS rpsL NC_014109.1 436117 436488 R identified by match to protein family HMM PF00164; match to protein family HMM TIGR00981; 30S ribosomal protein S12 complement(436117..436488) Candidatus Riesia pediculicola USDA 9111810 YP_003603309.1 CDS RIEPE_0454 NC_014109.1 436588 436713 R identified by glimmer; putative; hypothetical protein complement(436588..436713) Candidatus Riesia pediculicola USDA 9112147 YP_003603310.1 CDS ribE NC_014109.1 437187 437798 R identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187; riboflavin synthase, alpha subunit complement(437187..437798) Candidatus Riesia pediculicola USDA 9112270 YP_003603311.1 CDS mviN NC_014109.1 438312 439832 R identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN complement(438312..439832) Candidatus Riesia pediculicola USDA 9112266 YP_003603312.1 CDS RIEPE_0459 NC_014109.1 439897 440064 R identified by glimmer; putative; hypothetical protein complement(439897..440064) Candidatus Riesia pediculicola USDA 9111820 YP_003603313.1 CDS RIEPE_0461 NC_014109.1 440481 441053 R identified by match to protein family HMM PF01170; match to protein family HMM PF05175; protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) complement(440481..441053) Candidatus Riesia pediculicola USDA 9112281 YP_003603314.1 CDS prfA NC_014109.1 441324 442364 R identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 complement(441324..442364) Candidatus Riesia pediculicola USDA 9112086 YP_003603315.1 CDS RIEPE_0463 NC_014109.1 442361 442531 R identified by glimmer; putative; hypothetical protein complement(442361..442531) Candidatus Riesia pediculicola USDA 9111993 YP_003603316.1 CDS ispE NC_014109.1 442883 443776 D identified by match to protein family HMM PF00288; match to protein family HMM TIGR00154; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 442883..443776 Candidatus Riesia pediculicola USDA 9112067 YP_003603317.1 CDS RIEPE_0465 NC_014109.1 443776 444696 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 443776..444696 Candidatus Riesia pediculicola USDA 9111824 YP_003603318.1 CDS pth NC_014109.1 444761 445360 D identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447; peptidyl-tRNA hydrolase 444761..445360 Candidatus Riesia pediculicola USDA 9111883 YP_003603319.1 CDS alr NC_014109.1 445405 446493 R identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase complement(445405..446493) Candidatus Riesia pediculicola USDA 9112191 YP_003603320.1 CDS dnaB NC_014109.1 446506 447918 R identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase complement(446506..447918) Candidatus Riesia pediculicola USDA 9111716 YP_003603321.1 CDS RIEPE_0469 NC_014109.1 448101 448238 D identified by glimmer; putative; hypothetical protein 448101..448238 Candidatus Riesia pediculicola USDA 9112198 YP_003603322.1 CDS fabA NC_014109.1 448704 449228 R identified by match to protein family HMM PF07977; match to protein family HMM TIGR01749; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA complement(448704..449228) Candidatus Riesia pediculicola USDA 9112106 YP_003603323.1 CDS RIEPE_0471 NC_014109.1 449252 449398 D identified by glimmer; putative; hypothetical protein 449252..449398 Candidatus Riesia pediculicola USDA 9111938 YP_003603324.1 CDS RIEPE_0472 NC_014109.1 449634 449960 R identified by match to protein family HMM PF04358; dissimilatory sulfite reductase subunit C complement(449634..449960) Candidatus Riesia pediculicola USDA 9112012 YP_003603325.1 CDS ftsZ NC_014109.1 450602 451780 R identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ complement(450602..451780) Candidatus Riesia pediculicola USDA 9112262 YP_003603326.1 CDS ftsA NC_014109.1 451817 453085 R identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA complement(451817..453085) Candidatus Riesia pediculicola USDA 9111778 YP_003603327.1 CDS RIEPE_0477 NC_014109.1 453239 453448 R identified by glimmer; putative; hypothetical protein complement(453239..453448) Candidatus Riesia pediculicola USDA 9112151 YP_003603328.1 CDS RIEPE_0478 NC_014109.1 453418 453543 R identified by glimmer; putative; hypothetical protein complement(453418..453543) Candidatus Riesia pediculicola USDA 9112233 YP_003603329.1 CDS RIEPE_0479 NC_014109.1 453604 454530 R identified by match to protein family HMM PF01820; match to protein family HMM PF07478; D-alanine--D-alanine ligase B complement(453604..454530) Candidatus Riesia pediculicola USDA 9112040 YP_003603330.1 CDS murC NC_014109.1 454520 455977 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--alanine ligase complement(454520..455977) Candidatus Riesia pediculicola USDA 9111926 YP_003603331.1 CDS murG NC_014109.1 456015 457088 R identified by match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase complement(456015..457088) Candidatus Riesia pediculicola USDA 9111861 YP_003603332.1 CDS RIEPE_0482 NC_014109.1 457093 458202 R identified by match to protein family HMM PF01098; cell division protein FtsW complement(457093..458202) Candidatus Riesia pediculicola USDA 9111872 YP_003603333.1 CDS murD NC_014109.1 458224 459543 R identified by match to protein family HMM PF02875; match to protein family HMM TIGR01087; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(458224..459543) Candidatus Riesia pediculicola USDA 9112084 YP_003603334.1 CDS mraY NC_014109.1 459537 460619 R identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(459537..460619) Candidatus Riesia pediculicola USDA 9111885 YP_003603335.1 CDS RIEPE_0485 NC_014109.1 460616 461998 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(460616..461998) Candidatus Riesia pediculicola USDA 9111809 YP_003603336.1 CDS RIEPE_0486 NC_014109.1 461980 463494 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01085; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(461980..463494) Candidatus Riesia pediculicola USDA 9112216 YP_003603337.1 CDS RIEPE_0487 NC_014109.1 463491 465272 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; peptidoglycan synthetase FtsI complement(463491..465272) Candidatus Riesia pediculicola USDA 9112144 YP_003603338.1 CDS RIEPE_0488 NC_014109.1 465269 465514 R identified by glimmer; putative; hypothetical protein complement(465269..465514) Candidatus Riesia pediculicola USDA 9112166 YP_003603339.1 CDS mraW NC_014109.1 465519 466451 R identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW complement(465519..466451) Candidatus Riesia pediculicola USDA 9112108 YP_003603340.1 CDS metK NC_014109.1 467153 468310 D identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; S-adenosylmethionine synthetase 467153..468310 Candidatus Riesia pediculicola USDA 9112047 YP_003603341.1 CDS gltX NC_014109.1 468516 469928 R identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamyl-tRNA synthetase complement(468516..469928) Candidatus Riesia pediculicola USDA 9111966 YP_003603342.1 CDS RIEPE_0493 NC_014109.1 470854 471966 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR01187; spermidine/putrescine import ATP-binding protein PotA 470854..471966 Candidatus Riesia pediculicola USDA 9112264 YP_003603343.1 CDS RIEPE_0494 NC_014109.1 471956 472813 D identified by match to protein family HMM PF00528; spermidine/putrescine ABC transporter membrane component 471956..472813 Candidatus Riesia pediculicola USDA 9111870 YP_003603344.1 CDS RIEPE_0495 NC_014109.1 472817 473614 D identified by match to protein family HMM PF00528; spermidine/putrescine transport system permease 472817..473614 Candidatus Riesia pediculicola USDA 9111899 YP_003603345.1 CDS RIEPE_0496 NC_014109.1 473740 474789 D identified by match to protein family HMM PF01547; spermidine/putrescine-binding periplasmic protein 473740..474789 Candidatus Riesia pediculicola USDA 9112075 YP_003603346.1 CDS RIEPE_0498 NC_014109.1 475183 475311 D identified by glimmer; putative; hypothetical protein 475183..475311 Candidatus Riesia pediculicola USDA 9112261 YP_003603347.1 CDS RIEPE_0499 NC_014109.1 475422 475988 D hypothetical adenine-specific methylase YfcB 475422..475988 Candidatus Riesia pediculicola USDA 9111969 YP_003603348.1 CDS RIEPE_0500 NC_014109.1 475985 476344 D hypothetical adenine-specific methylase 475985..476344 Candidatus Riesia pediculicola USDA 9112163 YP_003603349.1 CDS aroC NC_014109.1 476396 477463 D identified by match to protein family HMM PF01264; match to protein family HMM TIGR00033; chorismate synthase 476396..477463 Candidatus Riesia pediculicola USDA 9111835 YP_003603350.1 CDS RIEPE_0502 NC_014109.1 477838 479082 D identified by match to protein family HMM PF00109; match to protein family HMM PF02801; 3-oxoacyl-[acyl-carrier-protein] synthase 1 477838..479082 Candidatus Riesia pediculicola USDA 9112031 YP_003603351.1 CDS RIEPE_0503 NC_014109.1 479234 480370 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; erythronate-4-phosphate dehydrogenase 479234..480370 Candidatus Riesia pediculicola USDA 9112241 YP_003603352.1 CDS RIEPE_0504 NC_014109.1 480406 480522 R identified by glimmer; putative; hypothetical protein complement(480406..480522) Candidatus Riesia pediculicola USDA 9111758 YP_003603353.1 CDS truA NC_014109.1 480539 481306 D identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 480539..481306 Candidatus Riesia pediculicola USDA 9111955 YP_003603354.1 CDS accD NC_014109.1 481526 482407 D identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase, beta subunit 481526..482407 Candidatus Riesia pediculicola USDA 9111879 YP_003603355.1 CDS folC NC_014109.1 482404 483690 D identified by match to protein family HMM TIGR01499; FolC bifunctional protein 482404..483690 Candidatus Riesia pediculicola USDA 9111978 YP_003603356.1 CDS RIEPE_0508 NC_014109.1 483730 484290 D identified by match to protein family HMM PF02441; match to protein family HMM TIGR00421; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 483730..484290 Candidatus Riesia pediculicola USDA 9111898 YP_003603357.1 CDS RIEPE_0509 NC_014109.1 484318 486471 R identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651; phosphate acetyltransferase complement(484318..486471) Candidatus Riesia pediculicola USDA 9111725 YP_003603358.1 CDS ackA NC_014109.1 486538 487761 R identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase complement(486538..487761) Candidatus Riesia pediculicola USDA 9111724 YP_003603359.1 CDS RIEPE_0511 NC_014109.1 488007 488138 R identified by glimmer; putative; hypothetical protein complement(488007..488138) Candidatus Riesia pediculicola USDA 9112226 YP_003603360.1 CDS RIEPE_0512 NC_014109.1 488842 488955 R identified by glimmer; putative; hypothetical protein complement(488842..488955) Candidatus Riesia pediculicola USDA 9112222 YP_003603361.1 CDS RIEPE_0513 NC_014109.1 489070 489507 R identified by match to protein family HMM PF00581; rhodanese domain protein complement(489070..489507) Candidatus Riesia pediculicola USDA 9111989 YP_003603362.1 CDS RIEPE_0514 NC_014109.1 489604 489774 D identified by glimmer; putative; hypothetical protein 489604..489774 Candidatus Riesia pediculicola USDA 9112184 YP_003603363.1 CDS RIEPE_0515 NC_014109.1 490538 490684 D phosphopantetheine adenylyltransferase 490538..490684 Candidatus Riesia pediculicola USDA 9112104 YP_003603364.1 CDS RIEPE_0516 NC_014109.1 490737 491033 D phosphopantetheine adenylyltransferase 490737..491033 Candidatus Riesia pediculicola USDA 9111782 YP_003603365.1 CDS rpmG NC_014109.1 491222 491389 R identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; ribosomal protein L33 complement(491222..491389) Candidatus Riesia pediculicola USDA 9111719 YP_003603366.1 CDS rpmB NC_014109.1 491361 491606 R identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; ribosomal protein L28 complement(491361..491606) Candidatus Riesia pediculicola USDA 9112205 YP_003603367.1 CDS murI NC_014109.1 491789 492601 D identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067; glutamate racemase 491789..492601 Candidatus Riesia pediculicola USDA 9112010 YP_003603368.1 CDS pgi NC_014109.1 492764 494425 D identified by match to protein family HMM PF00342; glucose-6-phosphate isomerase 492764..494425 Candidatus Riesia pediculicola USDA 9112091 YP_003603369.1 CDS ubiA NC_014109.1 494505 495383 D identified by match to protein family HMM PF01040; 4-hydroxybenzoate polyprenyl transferase 494505..495383 Candidatus Riesia pediculicola USDA 9111882 YP_003603370.1 CDS RIEPE_0522 NC_014109.1 495384 497879 R identified by match to protein family HMM PF01553; glycerol-3-phosphate acyltransferase, putative complement(495384..497879) Candidatus Riesia pediculicola USDA 9111932 YP_003603371.1 CDS pgsA NC_014109.1 498376 498915 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(498376..498915) Candidatus Riesia pediculicola USDA 9112288 YP_003603372.1 CDS RIEPE_0527 NC_014109.1 499431 500936 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; tripeptide permease TppB complement(499431..500936) Candidatus Riesia pediculicola USDA 9111944 YP_003603373.1 CDS RIEPE_0528 NC_014109.1 501110 502525 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium/alanine symporter complement(501110..502525) Candidatus Riesia pediculicola USDA 9111891 YP_003603374.1 CDS RIEPE_0529 NC_014109.1 502758 503180 R identified by match to protein family HMM PF03013; endonuclease V complement(502758..503180) Candidatus Riesia pediculicola USDA 9111960 YP_003603375.1 CDS RIEPE_0531 NC_014109.1 503420 504766 R identified by match to protein family HMM PF00208; match to protein family HMM PF02812; NADP-specific glutamate dehydrogenase complement(503420..504766) Candidatus Riesia pediculicola USDA 9112280 YP_003603376.1 CDS RIEPE_0532 NC_014109.1 504936 506420 R identified by match to protein family HMM PF01384; probable low-affinity inorganic phosphate transporter 2 complement(504936..506420) Candidatus Riesia pediculicola USDA 9111815 YP_003603377.1 CDS aroK NC_014109.1 507431 507979 D identified by match to protein family HMM PF01202; shikimate kinase 507431..507979 Candidatus Riesia pediculicola USDA 9112013 YP_003603378.1 CDS RIEPE_0534 NC_014109.1 507976 509097 D identified by match to protein family HMM PF01761; 3-dehydroquinate synthase 507976..509097 Candidatus Riesia pediculicola USDA 9112250 YP_003603379.1 CDS RIEPE_0535 NC_014109.1 509167 509283 R identified by glimmer; putative; hypothetical protein complement(509167..509283) Candidatus Riesia pediculicola USDA 9111855 YP_003603380.1 CDS rpe NC_014109.1 509479 510189 D identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 509479..510189 Candidatus Riesia pediculicola USDA 9112110 YP_003603381.1 CDS trpS NC_014109.1 510264 511301 D identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; tryptophanyl-tRNA synthetase 510264..511301 Candidatus Riesia pediculicola USDA 9111952 YP_003603382.1 CDS RIEPE_0538 NC_014109.1 511373 512005 R identified by match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase (Mn) complement(511373..512005) Candidatus Riesia pediculicola USDA 9112056 YP_003603383.1 CDS RIEPE_0539 NC_014109.1 512226 513692 R identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933; htpg complement(512226..513692) Candidatus Riesia pediculicola USDA 9112218 YP_003603384.1 CDS RIEPE_0540 NC_014109.1 514089 515561 R identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(514089..515561) Candidatus Riesia pediculicola USDA 9111940 YP_003603385.1 CDS RIEPE_0541 NC_014109.1 515672 517255 R identified by match to protein family HMM PF03109; ubiquinone biosynthesis protein complement(515672..517255) Candidatus Riesia pediculicola USDA 9111738 YP_003603386.1 CDS RIEPE_0542 NC_014109.1 517334 518050 R identified by match to protein family HMM PF01209; match to protein family HMM TIGR01934; ubiquinone/menaquinone biosynthesis methyltransferase UbiE complement(517334..518050) Candidatus Riesia pediculicola USDA 9112048 YP_003603387.1 CDS RIEPE_0543 NC_014109.1 518427 518576 R identified by glimmer; putative; hypothetical protein complement(518427..518576) Candidatus Riesia pediculicola USDA 9112112 YP_003603388.1 CDS RIEPE_0544 NC_014109.1 519022 519255 D bifunctional aspartokinase/homoserine dehydrogenase (AK-HD) 519022..519255 Candidatus Riesia pediculicola USDA 9112164 YP_003603389.1 CDS RIEPE_0545 NC_014109.1 519282 520424 D identified by match to protein family HMM PF00696; match to protein family HMM TIGR00657; bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) 519282..520424 Candidatus Riesia pediculicola USDA 9112219 YP_003603390.1 CDS RIEPE_0546 NC_014109.1 520597 521565 D identified by match to protein family HMM PF00923; transaldolase 520597..521565 Candidatus Riesia pediculicola USDA 9111774 YP_003603391.1 CDS RIEPE_0547 NC_014109.1 521604 521765 R identified by glimmer; putative; hypothetical protein complement(521604..521765) Candidatus Riesia pediculicola USDA 9111831 YP_003603392.1 CDS dnaK NC_014109.1 521907 523826 D identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK 521907..523826 Candidatus Riesia pediculicola USDA 9112131 YP_003603393.1 CDS dnaJ NC_014109.1 523927 525075 D identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ 523927..525075 Candidatus Riesia pediculicola USDA 9111754 YP_003603394.1 CDS nhaA NC_014109.1 525355 526548 D identified by match to protein family HMM PF06965; match to protein family HMM TIGR00773; Na+/H+ antiporter NhaA 525355..526548 Candidatus Riesia pediculicola USDA 9111849 YP_003603395.1 CDS rpsT NC_014109.1 526618 526881 R identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; ribosomal protein S20 complement(526618..526881) Candidatus Riesia pediculicola USDA 9111757 YP_003603396.1 CDS ribF NC_014109.1 527035 527970 D identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF 527035..527970 Candidatus Riesia pediculicola USDA 9112011 YP_003603397.1 CDS ileS NC_014109.1 527974 530808 D identified by match to protein family HMM PF00133; match to protein family HMM PF06827; match to protein family HMM TIGR00392; isoleucyl-tRNA synthetase 527974..530808 Candidatus Riesia pediculicola USDA 9111878 YP_003603398.1 CDS lspA NC_014109.1 530777 531295 D identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077; signal peptidase II 530777..531295 Candidatus Riesia pediculicola USDA 9112087 YP_003603399.1 CDS ispH NC_014109.1 531429 532364 D identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 531429..532364 Candidatus Riesia pediculicola USDA 9112050 YP_003603400.1 CDS dapB NC_014109.1 532430 533233 D identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase 532430..533233 Candidatus Riesia pediculicola USDA 9112230 YP_003603401.1 CDS RIEPE_0557 NC_014109.1 533497 534528 D identified by match to protein family HMM PF01551; peptidase M23B 533497..534528 Candidatus Riesia pediculicola USDA 9112180 YP_003603402.1 CDS ptsI NC_014109.1 534585 536306 R identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase complement(534585..536306) Candidatus Riesia pediculicola USDA 9112105 YP_003603403.1 CDS RIEPE_0559 NC_014109.1 536361 536618 R identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr complement(536361..536618) Candidatus Riesia pediculicola USDA 9112173 YP_003603404.1 CDS RIEPE_0560 NC_014109.1 536619 536744 D identified by glimmer; putative; hypothetical protein 536619..536744 Candidatus Riesia pediculicola USDA 9112234 YP_003603405.1 CDS ligA NC_014109.1 537140 538921 D identified by match to protein family HMM PF01653; match to protein family HMM PF03120; match to protein family HMM TIGR00575; DNA ligase, NAD-dependent 537140..538921 Candidatus Riesia pediculicola USDA 9112026 YP_003603406.1 CDS bioA NC_014109.1 539049 540353 R identified by match to protein family HMM PF00202; match to protein family HMM TIGR00508; adenosylmethionine-8-amino-7-oxononanoate transaminase complement(539049..540353) Candidatus Riesia pediculicola USDA 9112119 YP_003603407.1 CDS bioB NC_014109.1 540446 541465 D identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase 540446..541465 Candidatus Riesia pediculicola USDA 9111892 YP_003603408.1 CDS RIEPE_0564 NC_014109.1 541452 542642 D identified by match to protein family HMM PF00155; 8-amino-7-oxononanoate synthase 541452..542642 Candidatus Riesia pediculicola USDA 9111950 YP_003603409.1 CDS bioC NC_014109.1 542626 543381 D identified by match to protein family HMM TIGR02072; biotin biosynthesis protein BioC 542626..543381 Candidatus Riesia pediculicola USDA 9111818 YP_003603410.1 CDS bioD NC_014109.1 543374 544048 D identified by match to protein family HMM TIGR00347; dethiobiotin synthase 543374..544048 Candidatus Riesia pediculicola USDA 9111789 YP_003603411.1 CDS RIEPE_0567 NC_014109.1 544241 544966 D identified by match to protein family HMM PF01027; stationary phase anti-death Family 544241..544966 Candidatus Riesia pediculicola USDA 9112237 YP_003603412.1 CDS RIEPE_0568 NC_014109.1 545009 545875 R identified by match to protein family HMM PF00892; transporter, EamA family complement(545009..545875) Candidatus Riesia pediculicola USDA 9111745 YP_003603413.1 CDS RIEPE_0569 NC_014109.1 546114 546242 R identified by glimmer; putative; hypothetical protein complement(546114..546242) Candidatus Riesia pediculicola USDA 9111881 YP_003603414.1 CDS RIEPE_0570 NC_014109.1 546297 546872 D identified by match to protein family HMM PF01227; GTP cyclohydrolase I 546297..546872 Candidatus Riesia pediculicola USDA 9111739 YP_003603415.1 CDS metG NC_014109.1 546927 548558 R identified by match to protein family HMM PF01406; match to protein family HMM TIGR00398; methionyl-tRNA synthetase complement(546927..548558) Candidatus Riesia pediculicola USDA 9112195 YP_003603416.1 CDS dcd NC_014109.1 548895 549509 D identified by match to protein family HMM TIGR02274; deoxycytidine triphosphate deaminase 548895..549509 Candidatus Riesia pediculicola USDA 9112129 YP_003603417.1 CDS RIEPE_0573 NC_014109.1 549585 551159 R identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741; integral membrane protein TerC family complement(549585..551159) Candidatus Riesia pediculicola USDA 9112015 YP_003603418.1 CDS glyQ NC_014109.1 551646 552506 D identified by match to protein family HMM PF02091; match to protein family HMM TIGR00388; glycyl-tRNA synthetase, alpha subunit 551646..552506 Candidatus Riesia pediculicola USDA 9111924 YP_003603419.1 CDS glyS NC_014109.1 552509 554578 D identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211; glycyl-tRNA synthetase, beta subunit 552509..554578 Candidatus Riesia pediculicola USDA 9111889 YP_003603420.1 CDS RIEPE_0576 NC_014109.1 554607 555122 R hypothetical protein complement(554607..555122) Candidatus Riesia pediculicola USDA 9111843 YP_003603421.1 CDS RIEPE_0578 NC_014109.1 555239 557128 R identified by match to protein family HMM PF00140; match to protein family HMM PF03979; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF04546; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma factor RpoD complement(555239..557128) Candidatus Riesia pediculicola USDA 9112269 YP_003603422.1 CDS dnaG1 NC_014109.1 557233 558993 R identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM TIGR01391; DNA primase complement(557233..558993) Candidatus Riesia pediculicola USDA 9112029 YP_003603423.1 CDS rpsU1 NC_014109.1 559027 559272 R identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; ribosomal protein S21 complement(559027..559272) Candidatus Riesia pediculicola USDA 9111919 YP_003603424.1 CDS RIEPE_0581 NC_014109.1 559472 560503 D identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; O-sialoglycoprotein endopeptidase 559472..560503 Candidatus Riesia pediculicola USDA 9111727 YP_003603425.1 CDS folB1 NC_014109.1 560558 560911 D identified by match to protein family HMM PF02152; match to protein family HMM TIGR00526; dihydroneopterin aldolase 560558..560911 Candidatus Riesia pediculicola USDA 9111799 YP_003603426.1 CDS RIEPE_0583 NC_014109.1 560913 562166 R identified by match to protein family HMM PF01743; multifunctional CCA protein complement(560913..562166) Candidatus Riesia pediculicola USDA 9111851 YP_003603427.1 CDS RIEPE_0584 NC_014109.1 562441 562554 R identified by glimmer; putative; hypothetical protein complement(562441..562554) Candidatus Riesia pediculicola USDA 9111914 YP_003603428.1 CDS RIEPE_0585 NC_014109.1 562662 564074 D identified by match to protein family HMM PF00294; match to protein family HMM TIGR00125; bifunctional protein HldE 562662..564074 Candidatus Riesia pediculicola USDA 9112053 YP_003603429.1 CDS RIEPE_0586 NC_014109.1 564244 564729 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-stranded DNA-binding protein 564244..564729 Candidatus Riesia pediculicola USDA 9112211 YP_003603430.1 CDS RIEPE_0588 NC_014109.1 564970 565455 R identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-stranded DNA-binding protein complement(564970..565455) Candidatus Riesia pediculicola USDA 9112284 YP_003603431.1 CDS RIEPE_0589 NC_014109.1 565625 567037 R identified by match to protein family HMM PF00294; match to protein family HMM TIGR00125; bifunctional protein HldE complement(565625..567037) Candidatus Riesia pediculicola USDA 9111793 YP_003603432.1 CDS RIEPE_0590 NC_014109.1 567145 567258 D identified by glimmer; putative; hypothetical protein 567145..567258 Candidatus Riesia pediculicola USDA 9111718 YP_003603433.1 CDS RIEPE_0591 NC_014109.1 567533 568786 D identified by match to protein family HMM PF01743; multifunctional CCA protein 567533..568786 Candidatus Riesia pediculicola USDA 9111709 YP_003603434.1 CDS folB2 NC_014109.1 568788 569141 R identified by match to protein family HMM PF02152; match to protein family HMM TIGR00526; dihydroneopterin aldolase complement(568788..569141) Candidatus Riesia pediculicola USDA 9111746 YP_003603435.1 CDS RIEPE_0593 NC_014109.1 569196 570227 R identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; O-sialoglycoprotein endopeptidase complement(569196..570227) Candidatus Riesia pediculicola USDA 9111779 YP_003603436.1 CDS rpsU2 NC_014109.1 570427 570672 D identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; ribosomal protein S21 570427..570672 Candidatus Riesia pediculicola USDA 9112135 YP_003603437.1 CDS dnaG2 NC_014109.1 570706 572466 D identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM TIGR01391; DNA primase 570706..572466 Candidatus Riesia pediculicola USDA 9112200 YP_003603438.1 CDS RIEPE_0597 NC_014109.1 572571 >574390 D identified by match to protein family HMM PF00140; match to protein family HMM PF03979; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF04546; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma factor RpoD 572571..>574390 Candidatus Riesia pediculicola USDA 9112090 RIEPE_0045 tRNA RIEPE_0045 NC_014109.1 38461 38533 R tRNA-Ala complement(38461..38533) Candidatus Riesia pediculicola USDA 9112258 RIEPE_0046 tRNA RIEPE_0046 NC_014109.1 38556 38629 R tRNA-Ile complement(38556..38629) Candidatus Riesia pediculicola USDA 9112265 RIEPE_0055 tRNA RIEPE_0055 NC_014109.1 46793 46866 R tRNA-Arg complement(46793..46866) Candidatus Riesia pediculicola USDA 9112072 RIEPE_0056 tRNA RIEPE_0056 NC_014109.1 46881 46966 R tRNA-OTHER complement(46881..46966) Candidatus Riesia pediculicola USDA 9112267 RIEPE_0075 tRNA RIEPE_0075 NC_014109.1 66802 66874 D tRNA-Thr 66802..66874 Candidatus Riesia pediculicola USDA 9112223 RIEPE_0217 tRNA RIEPE_0217 NC_014109.1 219409 219481 D tRNA-Asp 219409..219481 Candidatus Riesia pediculicola USDA 9112097 RIEPE_0222 tRNA RIEPE_0222 NC_014109.1 224230 224300 R tRNA-Gln complement(224230..224300) Candidatus Riesia pediculicola USDA 9111753 RIEPE_0223 tRNA RIEPE_0223 NC_014109.1 224303 224387 R tRNA-Leu complement(224303..224387) Candidatus Riesia pediculicola USDA 9112271 RIEPE_0224 tRNA RIEPE_0224 NC_014109.1 224412 224484 R tRNA-Met complement(224412..224484) Candidatus Riesia pediculicola USDA 9112278 RIEPE_0236 tRNA RIEPE_0236 NC_014109.1 237424 237496 D tRNA-Lys 237424..237496 Candidatus Riesia pediculicola USDA 9111827 RIEPE_0239 tRNA RIEPE_0239 NC_014109.1 239233 239305 R tRNA-Trp complement(239233..239305) Candidatus Riesia pediculicola USDA 9111964 RIEPE_0242 tRNA RIEPE_0242 NC_014109.1 241975 242047 D tRNA-Arg 241975..242047 Candidatus Riesia pediculicola USDA 9111994 RIEPE_0243 tRNA RIEPE_0243 NC_014109.1 242063 242138 D tRNA-His 242063..242138 Candidatus Riesia pediculicola USDA 9112276 RIEPE_0245 tRNA RIEPE_0245 NC_014109.1 242154 242227 D tRNA-Pro 242154..242227 Candidatus Riesia pediculicola USDA 9112292 RIEPE_0251 tRNA RIEPE_0251 NC_014109.1 248374 248445 D tRNA-Gly 248374..248445 Candidatus Riesia pediculicola USDA 9111941 RIEPE_0271 tRNA RIEPE_0271 NC_014109.1 270575 270651 R tRNA-Met complement(270575..270651) Candidatus Riesia pediculicola USDA 9111721 RIEPE_0272 tRNA RIEPE_0272 NC_014109.1 270685 270773 R tRNA-Leu complement(270685..270773) Candidatus Riesia pediculicola USDA 9112287 RIEPE_0299 tRNA RIEPE_0299 NC_014109.1 292006 292079 R tRNA-Arg complement(292006..292079) Candidatus Riesia pediculicola USDA 9111741 RIEPE_0345 tRNA RIEPE_0345 NC_014109.1 337141 337212 R tRNA-Glu complement(337141..337212) Candidatus Riesia pediculicola USDA 9112254 RIEPE_0413 tRNA RIEPE_0413 NC_014109.1 411060 411134 R tRNA-Thr complement(411060..411134) Candidatus Riesia pediculicola USDA 9112043 RIEPE_0414 tRNA RIEPE_0414 NC_014109.1 411139 411210 R tRNA-Gly complement(411139..411210) Candidatus Riesia pediculicola USDA 9112274 RIEPE_0415 tRNA RIEPE_0415 NC_014109.1 411297 411380 R tRNA-Tyr complement(411297..411380) Candidatus Riesia pediculicola USDA 9112285 RIEPE_0455 tRNA RIEPE_0455 NC_014109.1 437043 437115 R tRNA-Phe complement(437043..437115) Candidatus Riesia pediculicola USDA 9112236 RIEPE_0457 tRNA RIEPE_0457 NC_014109.1 438193 438263 D tRNA-Val 438193..438263 Candidatus Riesia pediculicola USDA 9112220 RIEPE_0460 tRNA RIEPE_0460 NC_014109.1 440192 440277 D tRNA-Ser 440192..440277 Candidatus Riesia pediculicola USDA 9112124 RIEPE_0474 tRNA RIEPE_0474 NC_014109.1 450077 450164 D tRNA-Ser 450077..450164 Candidatus Riesia pediculicola USDA 9111982 RIEPE_0492 tRNA RIEPE_0492 NC_014109.1 470113 470185 D tRNA-Val 470113..470185 Candidatus Riesia pediculicola USDA 9111822 RIEPE_0497 tRNA RIEPE_0497 NC_014109.1 474854 474926 R tRNA-Arg complement(474854..474926) Candidatus Riesia pediculicola USDA 9111777 RIEPE_0523 tRNA RIEPE_0523 NC_014109.1 498090 498176 R tRNA-Leu complement(498090..498176) Candidatus Riesia pediculicola USDA 9111740 RIEPE_0525 tRNA RIEPE_0525 NC_014109.1 498205 498278 R tRNA-Cys complement(498205..498278) Candidatus Riesia pediculicola USDA 9112283 RIEPE_0530 tRNA RIEPE_0530 NC_014109.1 503291 503372 R tRNA-Leu complement(503291..503372) Candidatus Riesia pediculicola USDA 9111776 RIEPE_0577 tRNA RIEPE_0577 NC_014109.1 555160 555234 R tRNA-Met complement(555160..555234) Candidatus Riesia pediculicola USDA 9111734 RIEPE_0587 tRNA RIEPE_0587 NC_014109.1 564833 564904 D tRNA-Asn 564833..564904 Candidatus Riesia pediculicola USDA 9112139 RIEPE_0042 rRNA rrfA NC_014109.1 35193 35315 R 5S ribosomal RNA complement(35193..35315) Candidatus Riesia pediculicola USDA 9112063 RIEPE_0044 rRNA rrlA NC_014109.1 35428 38309 R 23S ribosomal RNA complement(35428..38309) Candidatus Riesia pediculicola USDA 9112255 RIEPE_0047 rRNA rrsA NC_014109.1 38674 40233 R 16S ribosomal RNA complement(38674..40233) Candidatus Riesia pediculicola USDA 9112282 RIEPE_0342 rRNA rrfB NC_014109.1 333887 334009 R 5S ribosomal RNA complement(333887..334009) Candidatus Riesia pediculicola USDA 9112136 RIEPE_0344 rRNA rrlB NC_014109.1 334122 337003 R 23S ribosomal RNA complement(334122..337003) Candidatus Riesia pediculicola USDA 9112256 RIEPE_0346 rRNA rrsB NC_014109.1 337291 338850 R 16S ribosomal RNA complement(337291..338850) Candidatus Riesia pediculicola USDA 9112289