-- dump date 20240506_065325 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 399025000001 SEQ_END SEQ_END NZ_CP114006.1 762251 762251 DR NZ_CP114006.1; contig end 762251..762251 Candidatus Phytoplasma rubi RS022_RS00005 CDS dnaA NZ_CP114006.1 51 1421 D Derived by automated computational analysis using gene prediction method: Protein Homology.; chromosomal replication initiator protein DnaA 51..1421 Candidatus Phytoplasma rubi RS022_RS00010 CDS dnaN NZ_CP114006.1 1461 2597 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit beta 1461..2597 Candidatus Phytoplasma rubi RS022_RS00015 CDS RS022_RS00015 NZ_CP114006.1 2636 3445 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 2636..3445 Candidatus Phytoplasma rubi RS022_RS00020 CDS trpS NZ_CP114006.1 3484 4497 D Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan--tRNA ligase 3484..4497 Candidatus Phytoplasma rubi RS022_RS00025 CDS RS022_RS00025 NZ_CP114006.1 4838 5776 R Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase complement(4838..5776) Candidatus Phytoplasma rubi RS022_RS00030 CDS RS022_RS00030 NZ_CP114006.1 6221 6847 R Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(6221..6847) Candidatus Phytoplasma rubi RS022_RS00035 CDS RS022_RS00035 NZ_CP114006.1 6928 8259 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(6928..8259) Candidatus Phytoplasma rubi RS022_RS00040 CDS RS022_RS00040 NZ_CP114006.1 8272 9771 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(8272..9771) Candidatus Phytoplasma rubi RS022_RS00045 CDS RS022_RS00045 NZ_CP114006.1 9788 10397 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(9788..10397) Candidatus Phytoplasma rubi RS022_RS00050 CDS RS022_RS00050 NZ_CP114006.1 10567 10917 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(10567..10917) Candidatus Phytoplasma rubi RS022_RS00055 CDS RS022_RS00055 NZ_CP114006.1 11268 11920 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(11268..11920) Candidatus Phytoplasma rubi RS022_RS00060 CDS RS022_RS00060 NZ_CP114006.1 11926 12174 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(11926..12174) Candidatus Phytoplasma rubi RS022_RS00065 CDS RS022_RS00065 NZ_CP114006.1 12158 12376 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(12158..12376) Candidatus Phytoplasma rubi RS022_RS00070 CDS RS022_RS00070 NZ_CP114006.1 12453 13691 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(12453..13691) Candidatus Phytoplasma rubi RS022_RS00075 CDS RS022_RS00075 NZ_CP114006.1 14299 14448 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; SVM family protein complement(14299..14448) Candidatus Phytoplasma rubi RS022_RS00080 CDS RS022_RS00080 NZ_CP114006.1 14463 15329 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(14463..15329) Candidatus Phytoplasma rubi RS022_RS00085 CDS RS022_RS00085 NZ_CP114006.1 15429 17045 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA double-strand break repair protein Rad50 complement(15429..17045) Candidatus Phytoplasma rubi RS022_RS00090 CDS RS022_RS00090 NZ_CP114006.1 17048 18232 R internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein complement(17048..18232) Candidatus Phytoplasma rubi RS022_RS00095 CDS RS022_RS00095 NZ_CP114006.1 18326 18925 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(18326..18925) Candidatus Phytoplasma rubi RS022_RS00100 CDS RS022_RS00100 NZ_CP114006.1 18928 19197 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(18928..19197) Candidatus Phytoplasma rubi RS022_RS00105 CDS RS022_RS00105 NZ_CP114006.1 19228 19362 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(19228..19362) Candidatus Phytoplasma rubi RS022_RS00110 CDS RS022_RS00110 NZ_CP114006.1 19378 19668 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(19378..19668) Candidatus Phytoplasma rubi RS022_RS00115 CDS RS022_RS00115 NZ_CP114006.1 19703 20032 R Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein complement(19703..20032) Candidatus Phytoplasma rubi RS022_RS00120 CDS RS022_RS00120 NZ_CP114006.1 20417 21022 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(20417..21022) Candidatus Phytoplasma rubi RS022_RS00125 CDS RS022_RS00125 NZ_CP114006.1 21499 21687 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(21499..21687) Candidatus Phytoplasma rubi RS022_RS00130 CDS RS022_RS00130 NZ_CP114006.1 22957 24135 R Derived by automated computational analysis using gene prediction method: Protein Homology.; malic enzyme-like NAD(P)-binding protein complement(22957..24135) Candidatus Phytoplasma rubi RS022_RS00135 CDS RS022_RS00135 NZ_CP114006.1 25038 25760 R Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA methyltransferase complement(25038..25760) Candidatus Phytoplasma rubi RS022_RS00140 CDS RS022_RS00140 NZ_CP114006.1 25800 26663 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YitT family protein complement(25800..26663) Candidatus Phytoplasma rubi RS022_RS00145 CDS rpsF NZ_CP114006.1 27375 27665 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S6 27375..27665 Candidatus Phytoplasma rubi RS022_RS00150 CDS ssb NZ_CP114006.1 27665 28081 D Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 27665..28081 Candidatus Phytoplasma rubi RS022_RS00155 CDS rpsR NZ_CP114006.1 28144 28383 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S18 28144..28383 Candidatus Phytoplasma rubi RS022_RS00160 CDS rplI NZ_CP114006.1 28587 31100 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L9 28587..31100 Candidatus Phytoplasma rubi RS022_RS00165 CDS dnaB NZ_CP114006.1 31125 32471 D Derived by automated computational analysis using gene prediction method: Protein Homology.; replicative DNA helicase 31125..32471 Candidatus Phytoplasma rubi RS022_RS00170 CDS RS022_RS00170 NZ_CP114006.1 32520 33596 D Derived by automated computational analysis using gene prediction method: Protein Homology.; PCRF domain-containing protein 32520..33596 Candidatus Phytoplasma rubi RS022_RS00175 CDS RS022_RS00175 NZ_CP114006.1 33583 34134 D Derived by automated computational analysis using gene prediction method: Protein Homology.; L-threonylcarbamoyladenylate synthase 33583..34134 Candidatus Phytoplasma rubi RS022_RS00180 CDS RS022_RS00180 NZ_CP114006.1 34124 35110 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit delta complement(34124..35110) Candidatus Phytoplasma rubi RS022_RS00185 CDS RS022_RS00185 NZ_CP114006.1 35153 36061 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase complement(35153..36061) Candidatus Phytoplasma rubi RS022_RS00190 CDS RS022_RS00190 NZ_CP114006.1 36097 36879 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YitT family protein complement(36097..36879) Candidatus Phytoplasma rubi RS022_RS00195 CDS ileS NZ_CP114006.1 36915 39671 R Derived by automated computational analysis using gene prediction method: Protein Homology.; isoleucine--tRNA ligase complement(36915..39671) Candidatus Phytoplasma rubi RS022_RS00200 CDS ychF NZ_CP114006.1 39726 40829 R Derived by automated computational analysis using gene prediction method: Protein Homology.; redox-regulated ATPase YchF complement(39726..40829) Candidatus Phytoplasma rubi RS022_RS00205 CDS RS022_RS00205 NZ_CP114006.1 42035 42751 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 42035..42751 Candidatus Phytoplasma rubi RS022_RS00210 CDS RS022_RS00210 NZ_CP114006.1 43077 45842 R Derived by automated computational analysis using gene prediction method: Protein Homology.; trypsin-like peptidase domain-containing protein complement(43077..45842) Candidatus Phytoplasma rubi RS022_RS00215 CDS hrcA NZ_CP114006.1 46176 47201 D Derived by automated computational analysis using gene prediction method: Protein Homology.; heat-inducible transcriptional repressor HrcA 46176..47201 Candidatus Phytoplasma rubi RS022_RS00220 CDS RS022_RS00220 NZ_CP114006.1 47229 48248 D Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleotide exchange factor GrpE 47229..48248 Candidatus Phytoplasma rubi RS022_RS00225 CDS dnaK NZ_CP114006.1 48235 50109 D Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaK 48235..50109 Candidatus Phytoplasma rubi RS022_RS00230 CDS dnaJ NZ_CP114006.1 50207 51325 D Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaJ 50207..51325 Candidatus Phytoplasma rubi RS022_RS00235 CDS RS022_RS00235 NZ_CP114006.1 51429 52418 D Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoate--protein ligase 51429..52418 Candidatus Phytoplasma rubi RS022_RS00240 CDS RS022_RS00240 NZ_CP114006.1 53420 55138 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein 53420..55138 Candidatus Phytoplasma rubi RS022_RS00245 CDS RS022_RS00245 NZ_CP114006.1 55242 55844 R Derived by automated computational analysis using gene prediction method: Protein Homology.; nitroreductase family protein complement(55242..55844) Candidatus Phytoplasma rubi RS022_RS00250 CDS thrS NZ_CP114006.1 56017 57948 R Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine--tRNA ligase complement(56017..57948) Candidatus Phytoplasma rubi RS022_RS00255 CDS mnmE NZ_CP114006.1 58074 59447 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE complement(58074..59447) Candidatus Phytoplasma rubi RS022_RS00260 CDS RS022_RS00260 NZ_CP114006.1 59489 60436 R Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional oligoribonuclease/PAP phosphatase NrnA complement(59489..60436) Candidatus Phytoplasma rubi RS022_RS00265 CDS RS022_RS00265 NZ_CP114006.1 60554 62068 R Derived by automated computational analysis using gene prediction method: Protein Homology.; extracellular solute-binding protein complement(60554..62068) Candidatus Phytoplasma rubi RS022_RS00270 CDS RS022_RS00270 NZ_CP114006.1 62052 62966 R Derived by automated computational analysis using gene prediction method: Protein Homology.; carbohydrate ABC transporter permease complement(62052..62966) Candidatus Phytoplasma rubi RS022_RS00275 CDS RS022_RS00275 NZ_CP114006.1 62988 63914 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease complement(62988..63914) Candidatus Phytoplasma rubi RS022_RS00280 CDS RS022_RS00280 NZ_CP114006.1 63915 65009 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein complement(63915..65009) Candidatus Phytoplasma rubi RS022_RS00285 CDS asnS NZ_CP114006.1 65041 66432 R Derived by automated computational analysis using gene prediction method: Protein Homology.; asparagine--tRNA ligase complement(65041..66432) Candidatus Phytoplasma rubi RS022_RS00290 CDS RS022_RS00290 NZ_CP114006.1 68669 69310 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 68669..69310 Candidatus Phytoplasma rubi RS022_RS00295 CDS RS022_RS00295 NZ_CP114006.1 69332 69883 R Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction resolvase RecU complement(69332..69883) Candidatus Phytoplasma rubi RS022_RS00300 CDS RS022_RS00300 NZ_CP114006.1 69995 71677 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease J 69995..71677 Candidatus Phytoplasma rubi RS022_RS00305 CDS RS022_RS00305 NZ_CP114006.1 71721 73415 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease J 71721..73415 Candidatus Phytoplasma rubi RS022_RS00310 CDS RS022_RS00310 NZ_CP114006.1 73532 73864 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 73532..73864 Candidatus Phytoplasma rubi RS022_RS00315 CDS mutM NZ_CP114006.1 73970 74806 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-formamidopyrimidine glycosylase 73970..74806 Candidatus Phytoplasma rubi RS022_RS00320 CDS RS022_RS00320 NZ_CP114006.1 74837 76027 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaD domain protein 74837..76027 Candidatus Phytoplasma rubi RS022_RS00325 CDS RS022_RS00325 NZ_CP114006.1 76045 76860 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 76045..76860 Candidatus Phytoplasma rubi RS022_RS00330 CDS RS022_RS00330 NZ_CP114006.1 78035 78277 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(78035..78277) Candidatus Phytoplasma rubi RS022_RS00335 CDS RS022_RS00335 NZ_CP114006.1 78607 78984 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 78607..78984 Candidatus Phytoplasma rubi RS022_RS00340 CDS RS022_RS00340 NZ_CP114006.1 79430 79721 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(79430..79721) Candidatus Phytoplasma rubi RS022_RS00345 CDS RS022_RS00345 NZ_CP114006.1 79714 79839 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(79714..79839) Candidatus Phytoplasma rubi RS022_RS00350 CDS RS022_RS00350 NZ_CP114006.1 80089 80685 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA methyltransferase complement(80089..80685) Candidatus Phytoplasma rubi RS022_RS00355 CDS RS022_RS00355 NZ_CP114006.1 81957 82907 R Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase complement(81957..82907) Candidatus Phytoplasma rubi RS022_RS00360 CDS RS022_RS00360 NZ_CP114006.1 82903 83175 R Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase complement(82903..83175) Candidatus Phytoplasma rubi RS022_RS00365 CDS RS022_RS00365 NZ_CP114006.1 83289 83474 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(83289..83474) Candidatus Phytoplasma rubi RS022_RS00370 CDS RS022_RS00370 NZ_CP114006.1 83741 84367 D Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 83741..84367 Candidatus Phytoplasma rubi RS022_RS00375 CDS RS022_RS00375 NZ_CP114006.1 84592 84936 D Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 84592..84936 Candidatus Phytoplasma rubi RS022_RS00380 CDS RS022_RS00380 NZ_CP114006.1 85152 85346 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 85152..85346 Candidatus Phytoplasma rubi RS022_RS00385 CDS RS022_RS00385 NZ_CP114006.1 85321 86151 D internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; Dam family site-specific DNA-(adenine-N6)-methyltransferase 85321..86151 Candidatus Phytoplasma rubi RS022_RS00390 CDS RS022_RS00390 NZ_CP114006.1 86267 86401 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 86267..86401 Candidatus Phytoplasma rubi RS022_RS00395 CDS RS022_RS00395 NZ_CP114006.1 86379 86669 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 86379..86669 Candidatus Phytoplasma rubi RS022_RS00400 CDS RS022_RS00400 NZ_CP114006.1 87474 87893 D incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 87474..>87893 Candidatus Phytoplasma rubi RS022_RS00405 CDS RS022_RS00405 NZ_CP114006.1 88161 89037 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 88161..89037 Candidatus Phytoplasma rubi RS022_RS00410 CDS RS022_RS00410 NZ_CP114006.1 89134 89370 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 89134..89370 Candidatus Phytoplasma rubi RS022_RS00415 CDS RS022_RS00415 NZ_CP114006.1 89377 90222 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 89377..90222 Candidatus Phytoplasma rubi RS022_RS00420 CDS RS022_RS00420 NZ_CP114006.1 90263 91021 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 90263..91021 Candidatus Phytoplasma rubi RS022_RS00425 CDS RS022_RS00425 NZ_CP114006.1 90996 91343 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; chromosome partitioning protein ParA 90996..91343 Candidatus Phytoplasma rubi RS022_RS00430 CDS RS022_RS00430 NZ_CP114006.1 91410 92120 D Derived by automated computational analysis using gene prediction method: Protein Homology.; effector 91410..92120 Candidatus Phytoplasma rubi RS022_RS00435 CDS RS022_RS00435 NZ_CP114006.1 92155 92721 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 92155..92721 Candidatus Phytoplasma rubi RS022_RS00440 CDS RS022_RS00440 NZ_CP114006.1 92777 93622 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 92777..93622 Candidatus Phytoplasma rubi RS022_RS00445 CDS RS022_RS00445 NZ_CP114006.1 93694 93936 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 93694..93936 Candidatus Phytoplasma rubi RS022_RS00450 CDS RS022_RS00450 NZ_CP114006.1 93954 94286 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 93954..94286 Candidatus Phytoplasma rubi RS022_RS00455 CDS RS022_RS00455 NZ_CP114006.1 94390 94608 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 94390..94608 Candidatus Phytoplasma rubi RS022_RS00460 CDS RS022_RS00460 NZ_CP114006.1 94592 94840 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 94592..94840 Candidatus Phytoplasma rubi RS022_RS00465 CDS RS022_RS00465 NZ_CP114006.1 94846 95487 D Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein 94846..95487 Candidatus Phytoplasma rubi RS022_RS00470 CDS RS022_RS00470 NZ_CP114006.1 95608 95928 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein 95608..95928 Candidatus Phytoplasma rubi RS022_RS00475 CDS tmk NZ_CP114006.1 95966 96574 D Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase 95966..96574 Candidatus Phytoplasma rubi RS022_RS00480 CDS RS022_RS00480 NZ_CP114006.1 96746 97351 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 96746..97351 Candidatus Phytoplasma rubi RS022_RS00485 CDS RS022_RS00485 NZ_CP114006.1 97369 98862 D internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein 97369..98862 Candidatus Phytoplasma rubi RS022_RS00490 CDS RS022_RS00490 NZ_CP114006.1 98874 99419 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; CHC2 zinc finger domain-containing protein 98874..99419 Candidatus Phytoplasma rubi RS022_RS00495 CDS RS022_RS00495 NZ_CP114006.1 99425 99700 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 99425..99700 Candidatus Phytoplasma rubi RS022_RS00500 CDS RS022_RS00500 NZ_CP114006.1 99853 100194 D Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein 99853..100194 Candidatus Phytoplasma rubi RS022_RS00505 CDS RS022_RS00505 NZ_CP114006.1 100337 100966 D Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein 100337..100966 Candidatus Phytoplasma rubi RS022_RS00510 CDS RS022_RS00510 NZ_CP114006.1 101453 102391 D Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase 101453..102391 Candidatus Phytoplasma rubi RS022_RS00515 CDS RS022_RS00515 NZ_CP114006.1 102685 103284 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(102685..103284) Candidatus Phytoplasma rubi RS022_RS00520 CDS RS022_RS00520 NZ_CP114006.1 103441 103611 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(103441..103611) Candidatus Phytoplasma rubi RS022_RS00525 CDS RS022_RS00525 NZ_CP114006.1 104767 105960 R Derived by automated computational analysis using gene prediction method: Protein Homology.; aminotransferase class V-fold PLP-dependent enzyme complement(104767..105960) Candidatus Phytoplasma rubi RS022_RS00530 CDS RS022_RS00530 NZ_CP114006.1 107452 107871 R Derived by automated computational analysis using gene prediction method: Protein Homology.; OsmC family protein complement(107452..107871) Candidatus Phytoplasma rubi RS022_RS00535 CDS RS022_RS00535 NZ_CP114006.1 107925 108266 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(107925..108266) Candidatus Phytoplasma rubi RS022_RS00540 CDS RS022_RS00540 NZ_CP114006.1 108281 108487 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YneF family protein complement(108281..108487) Candidatus Phytoplasma rubi RS022_RS00545 CDS rsmD NZ_CP114006.1 108596 109156 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD complement(108596..109156) Candidatus Phytoplasma rubi RS022_RS00550 CDS yqeK NZ_CP114006.1 109163 109750 R Derived by automated computational analysis using gene prediction method: Protein Homology.; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK complement(109163..109750) Candidatus Phytoplasma rubi RS022_RS00555 CDS RS022_RS00555 NZ_CP114006.1 109763 110323 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HAD-IIIA family hydrolase complement(109763..110323) Candidatus Phytoplasma rubi RS022_RS00560 CDS greA NZ_CP114006.1 110325 110804 R Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription elongation factor GreA complement(110325..110804) Candidatus Phytoplasma rubi RS022_RS00565 CDS RS022_RS00565 NZ_CP114006.1 110830 111414 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(110830..111414) Candidatus Phytoplasma rubi RS022_RS00570 CDS ruvX NZ_CP114006.1 111429 111878 R Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction resolvase RuvX complement(111429..111878) Candidatus Phytoplasma rubi RS022_RS00575 CDS alaS NZ_CP114006.1 111875 114517 R Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine--tRNA ligase complement(111875..114517) Candidatus Phytoplasma rubi RS022_RS00580 CDS rpmF NZ_CP114006.1 114566 114766 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L32 complement(114566..114766) Candidatus Phytoplasma rubi RS022_RS00590 CDS RS022_RS00590 NZ_CP114006.1 115062 115505 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (adenine(22)-N(1))-methyltransferase TrmK complement(115062..115505) Candidatus Phytoplasma rubi RS022_RS00595 CDS RS022_RS00595 NZ_CP114006.1 115502 116767 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(115502..116767) Candidatus Phytoplasma rubi RS022_RS00600 CDS dnaG NZ_CP114006.1 116827 118713 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA primase complement(116827..118713) Candidatus Phytoplasma rubi RS022_RS00605 CDS RS022_RS00605 NZ_CP114006.1 118765 120141 R Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine--tRNA ligase complement(118765..120141) Candidatus Phytoplasma rubi RS022_RS00610 CDS era NZ_CP114006.1 120177 121070 R Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase Era complement(120177..121070) Candidatus Phytoplasma rubi RS022_RS00615 CDS ybeY NZ_CP114006.1 121141 121548 R Derived by automated computational analysis using gene prediction method: Protein Homology.; rRNA maturation RNase YbeY complement(121141..121548) Candidatus Phytoplasma rubi RS022_RS00620 CDS rpsU NZ_CP114006.1 121690 121860 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S21 complement(121690..121860) Candidatus Phytoplasma rubi RS022_RS00625 CDS RS022_RS00625 NZ_CP114006.1 122011 122244 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(122011..122244) Candidatus Phytoplasma rubi RS022_RS00630 CDS lon NZ_CP114006.1 122269 124611 R Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase La complement(122269..124611) Candidatus Phytoplasma rubi RS022_RS00635 CDS tig NZ_CP114006.1 124723 126030 R Derived by automated computational analysis using gene prediction method: Protein Homology.; trigger factor complement(124723..126030) Candidatus Phytoplasma rubi RS022_RS00640 CDS RS022_RS00640 NZ_CP114006.1 126508 127680 D Derived by automated computational analysis using gene prediction method: Protein Homology.; rRNA adenine N-6-methyltransferase family protein 126508..127680 Candidatus Phytoplasma rubi RS022_RS00645 CDS RS022_RS00645 NZ_CP114006.1 128261 128866 D Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 128261..128866 Candidatus Phytoplasma rubi RS022_RS00650 CDS RS022_RS00650 NZ_CP114006.1 129130 129459 D internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 129130..129459 Candidatus Phytoplasma rubi RS022_RS00655 CDS RS022_RS00655 NZ_CP114006.1 129640 130251 D internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA adenine methylase 129640..>130251 Candidatus Phytoplasma rubi RS022_RS00660 CDS RS022_RS00660 NZ_CP114006.1 130257 130583 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 130257..130583 Candidatus Phytoplasma rubi RS022_RS00665 CDS RS022_RS00665 NZ_CP114006.1 130700 130987 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein 130700..130987 Candidatus Phytoplasma rubi RS022_RS00670 CDS RS022_RS00670 NZ_CP114006.1 131083 131373 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 131083..131373 Candidatus Phytoplasma rubi RS022_RS00675 CDS RS022_RS00675 NZ_CP114006.1 131796 132020 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 131796..132020 Candidatus Phytoplasma rubi RS022_RS00680 CDS RS022_RS00680 NZ_CP114006.1 132305 132982 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 132305..132982 Candidatus Phytoplasma rubi RS022_RS00685 CDS RS022_RS00685 NZ_CP114006.1 133017 133613 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 133017..133613 Candidatus Phytoplasma rubi RS022_RS00690 CDS RS022_RS00690 NZ_CP114006.1 133716 134054 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(133716..134054) Candidatus Phytoplasma rubi RS022_RS00695 CDS RS022_RS00695 NZ_CP114006.1 134380 134982 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 134380..134982 Candidatus Phytoplasma rubi RS022_RS00700 CDS RS022_RS00700 NZ_CP114006.1 135223 135591 D Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 135223..135591 Candidatus Phytoplasma rubi RS022_RS00705 CDS RS022_RS00705 NZ_CP114006.1 135636 135926 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 135636..135926 Candidatus Phytoplasma rubi RS022_RS00710 CDS RS022_RS00710 NZ_CP114006.1 135969 138268 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase 135969..138268 Candidatus Phytoplasma rubi RS022_RS00715 CDS RS022_RS00715 NZ_CP114006.1 138353 138646 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 138353..138646 Candidatus Phytoplasma rubi RS022_RS00720 CDS RS022_RS00720 NZ_CP114006.1 138627 139514 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 138627..139514 Candidatus Phytoplasma rubi RS022_RS00725 CDS RS022_RS00725 NZ_CP114006.1 139453 140631 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 139453..140631 Candidatus Phytoplasma rubi RS022_RS00730 CDS RS022_RS00730 NZ_CP114006.1 140698 141432 D Derived by automated computational analysis using gene prediction method: Protein Homology.; effector 140698..141432 Candidatus Phytoplasma rubi RS022_RS00735 CDS RS022_RS00735 NZ_CP114006.1 141468 141776 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 141468..141776 Candidatus Phytoplasma rubi RS022_RS00740 CDS RS022_RS00740 NZ_CP114006.1 142099 142356 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 142099..142356 Candidatus Phytoplasma rubi RS022_RS00745 CDS RS022_RS00745 NZ_CP114006.1 142612 142836 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 142612..142836 Candidatus Phytoplasma rubi RS022_RS00750 CDS RS022_RS00750 NZ_CP114006.1 142865 143514 D frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein 142865..143514 Candidatus Phytoplasma rubi RS022_RS00755 CDS RS022_RS00755 NZ_CP114006.1 143589 143882 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein 143589..143882 Candidatus Phytoplasma rubi RS022_RS00760 CDS tmk NZ_CP114006.1 143915 144523 D Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase 143915..144523 Candidatus Phytoplasma rubi RS022_RS00765 CDS RS022_RS00765 NZ_CP114006.1 144523 144663 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 144523..144663 Candidatus Phytoplasma rubi RS022_RS00770 CDS RS022_RS00770 NZ_CP114006.1 144694 145299 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 144694..145299 Candidatus Phytoplasma rubi RS022_RS00775 CDS RS022_RS00775 NZ_CP114006.1 145318 146811 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein 145318..146811 Candidatus Phytoplasma rubi RS022_RS00780 CDS RS022_RS00780 NZ_CP114006.1 146824 148149 D Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein 146824..148149 Candidatus Phytoplasma rubi RS022_RS00785 CDS RS022_RS00785 NZ_CP114006.1 148282 148903 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein 148282..148903 Candidatus Phytoplasma rubi RS022_RS00790 CDS RS022_RS00790 NZ_CP114006.1 149368 150304 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase 149368..150304 Candidatus Phytoplasma rubi RS022_RS00795 CDS RS022_RS00795 NZ_CP114006.1 150742 151056 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(150742..151056) Candidatus Phytoplasma rubi RS022_RS00800 CDS RS022_RS00800 NZ_CP114006.1 151094 151330 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(151094..151330) Candidatus Phytoplasma rubi RS022_RS00805 CDS RS022_RS00805 NZ_CP114006.1 151327 151740 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(151327..151740) Candidatus Phytoplasma rubi RS022_RS00810 CDS RS022_RS00810 NZ_CP114006.1 151820 152095 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(151820..152095) Candidatus Phytoplasma rubi RS022_RS00815 CDS RS022_RS00815 NZ_CP114006.1 153873 154607 D Derived by automated computational analysis using gene prediction method: Protein Homology.; pseudouridine synthase 153873..154607 Candidatus Phytoplasma rubi RS022_RS00820 CDS RS022_RS00820 NZ_CP114006.1 155195 155800 D internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 155195..155800 Candidatus Phytoplasma rubi RS022_RS00825 CDS RS022_RS00825 NZ_CP114006.1 156062 156391 D internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 156062..156391 Candidatus Phytoplasma rubi RS022_RS00830 CDS RS022_RS00830 NZ_CP114006.1 156421 156855 R incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(<156421..156855) Candidatus Phytoplasma rubi RS022_RS00835 CDS RS022_RS00835 NZ_CP114006.1 156878 157252 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein complement(156878..157252) Candidatus Phytoplasma rubi RS022_RS00840 CDS RS022_RS00840 NZ_CP114006.1 157392 158717 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(157392..158717) Candidatus Phytoplasma rubi RS022_RS00845 CDS RS022_RS00845 NZ_CP114006.1 159120 160058 R Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase complement(159120..160058) Candidatus Phytoplasma rubi RS022_RS00850 CDS RS022_RS00850 NZ_CP114006.1 160512 161138 R Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(160512..161138) Candidatus Phytoplasma rubi RS022_RS00855 CDS RS022_RS00855 NZ_CP114006.1 161281 162605 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(161281..162605) Candidatus Phytoplasma rubi RS022_RS00860 CDS RS022_RS00860 NZ_CP114006.1 162617 164110 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(162617..164110) Candidatus Phytoplasma rubi RS022_RS00865 CDS RS022_RS00865 NZ_CP114006.1 164117 164730 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(164117..164730) Candidatus Phytoplasma rubi RS022_RS00870 CDS RS022_RS00870 NZ_CP114006.1 164763 164897 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(164763..164897) Candidatus Phytoplasma rubi RS022_RS00875 CDS tmk NZ_CP114006.1 164897 165517 R Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase complement(164897..165517) Candidatus Phytoplasma rubi RS022_RS00880 CDS RS022_RS00880 NZ_CP114006.1 165577 166224 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(165577..166224) Candidatus Phytoplasma rubi RS022_RS00885 CDS RS022_RS00885 NZ_CP114006.1 166230 166478 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(166230..166478) Candidatus Phytoplasma rubi RS022_RS00890 CDS RS022_RS00890 NZ_CP114006.1 166734 166991 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(166734..166991) Candidatus Phytoplasma rubi RS022_RS00895 CDS RS022_RS00895 NZ_CP114006.1 167316 167624 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(167316..167624) Candidatus Phytoplasma rubi RS022_RS00900 CDS RS022_RS00900 NZ_CP114006.1 167660 168394 R Derived by automated computational analysis using gene prediction method: Protein Homology.; effector complement(167660..168394) Candidatus Phytoplasma rubi RS022_RS00905 CDS RS022_RS00905 NZ_CP114006.1 168461 169108 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATPase complement(168461..169108) Candidatus Phytoplasma rubi RS022_RS00910 CDS RS022_RS00910 NZ_CP114006.1 169440 169577 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 169440..169577 Candidatus Phytoplasma rubi RS022_RS00915 CDS RS022_RS00915 NZ_CP114006.1 169578 170468 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(169578..170468) Candidatus Phytoplasma rubi RS022_RS00920 CDS RS022_RS00920 NZ_CP114006.1 170555 172855 R Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase complement(170555..172855) Candidatus Phytoplasma rubi RS022_RS00925 CDS RS022_RS00925 NZ_CP114006.1 172898 173188 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(172898..173188) Candidatus Phytoplasma rubi RS022_RS00930 CDS RS022_RS00930 NZ_CP114006.1 173274 173602 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein complement(173274..173602) Candidatus Phytoplasma rubi RS022_RS00935 CDS RS022_RS00935 NZ_CP114006.1 173841 174446 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(173841..174446) Candidatus Phytoplasma rubi RS022_RS00940 CDS RS022_RS00940 NZ_CP114006.1 174488 176027 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(174488..176027) Candidatus Phytoplasma rubi RS022_RS00945 CDS RS022_RS00945 NZ_CP114006.1 176046 176658 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(176046..176658) Candidatus Phytoplasma rubi RS022_RS00950 CDS RS022_RS00950 NZ_CP114006.1 176698 176841 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(176698..176841) Candidatus Phytoplasma rubi RS022_RS04115 CDS tmk NZ_CP114006.1 176825 177461 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase complement(176825..177461) Candidatus Phytoplasma rubi RS022_RS00965 CDS RS022_RS00965 NZ_CP114006.1 177495 177734 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein complement(177495..177734) Candidatus Phytoplasma rubi RS022_RS00970 CDS RS022_RS00970 NZ_CP114006.1 177679 177864 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein complement(177679..177864) Candidatus Phytoplasma rubi RS022_RS00975 CDS RS022_RS00975 NZ_CP114006.1 177939 178220 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(177939..178220) Candidatus Phytoplasma rubi RS022_RS00980 CDS RS022_RS00980 NZ_CP114006.1 178334 178507 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(178334..178507) Candidatus Phytoplasma rubi RS022_RS00985 CDS RS022_RS00985 NZ_CP114006.1 178567 179213 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(178567..179213) Candidatus Phytoplasma rubi RS022_RS00990 CDS RS022_RS00990 NZ_CP114006.1 179455 179667 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(179455..179667) Candidatus Phytoplasma rubi RS022_RS00995 CDS RS022_RS00995 NZ_CP114006.1 179763 180344 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(179763..180344) Candidatus Phytoplasma rubi RS022_RS01000 CDS RS022_RS01000 NZ_CP114006.1 180379 180786 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(180379..180786) Candidatus Phytoplasma rubi RS022_RS01005 CDS RS022_RS01005 NZ_CP114006.1 180879 181187 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(180879..181187) Candidatus Phytoplasma rubi RS022_RS01010 CDS RS022_RS01010 NZ_CP114006.1 181274 181997 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; effector complement(181274..181997) Candidatus Phytoplasma rubi RS022_RS01015 CDS RS022_RS01015 NZ_CP114006.1 182064 183119 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(182064..183119) Candidatus Phytoplasma rubi RS022_RS01020 CDS RS022_RS01020 NZ_CP114006.1 183154 184020 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(183154..184020) Candidatus Phytoplasma rubi RS022_RS01025 CDS RS022_RS01025 NZ_CP114006.1 184893 186212 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 184893..186212 Candidatus Phytoplasma rubi RS022_RS01030 CDS pyk NZ_CP114006.1 186451 187806 D Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate kinase 186451..187806 Candidatus Phytoplasma rubi RS022_RS01035 CDS RS022_RS01035 NZ_CP114006.1 187929 188720 D Derived by automated computational analysis using gene prediction method: Protein Homology.; Bax inhibitor-1/YccA family protein 187929..188720 Candidatus Phytoplasma rubi RS022_RS01040 CDS rpsP NZ_CP114006.1 188781 189035 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S16 188781..189035 Candidatus Phytoplasma rubi RS022_RS01045 CDS trmD NZ_CP114006.1 189040 189789 D Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (guanosine(37)-N1)-methyltransferase TrmD 189040..189789 Candidatus Phytoplasma rubi RS022_RS01050 CDS rplS NZ_CP114006.1 189779 190132 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L19 189779..190132 Candidatus Phytoplasma rubi RS022_RS01055 CDS tyrS NZ_CP114006.1 190198 191454 D Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine--tRNA ligase 190198..191454 Candidatus Phytoplasma rubi RS022_RS01060 CDS sufU NZ_CP114006.1 191515 191943 D Derived by automated computational analysis using gene prediction method: Protein Homology.; Fe-S cluster assembly sulfur transfer protein SufU 191515..191943 Candidatus Phytoplasma rubi RS022_RS01065 CDS RS022_RS01065 NZ_CP114006.1 192069 192770 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding cassette domain-containing protein 192069..192770 Candidatus Phytoplasma rubi RS022_RS01070 CDS RS022_RS01070 NZ_CP114006.1 192793 193782 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 192793..193782 Candidatus Phytoplasma rubi RS022_RS01075 CDS RS022_RS01075 NZ_CP114006.1 193789 194523 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter permease subunit 193789..194523 Candidatus Phytoplasma rubi RS022_RS01080 CDS RS022_RS01080 NZ_CP114006.1 194642 196015 D Derived by automated computational analysis using gene prediction method: Protein Homology.; Wadjet anti-phage system protein JetA family protein 194642..196015 Candidatus Phytoplasma rubi RS022_RS01085 CDS RS022_RS01085 NZ_CP114006.1 196165 196914 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 196165..196914 Candidatus Phytoplasma rubi RS022_RS01090 CDS yihA NZ_CP114006.1 197281 197871 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome biogenesis GTP-binding protein YihA/YsxC 197281..197871 Candidatus Phytoplasma rubi RS022_RS01095 CDS RS022_RS01095 NZ_CP114006.1 197963 200533 D Derived by automated computational analysis using gene prediction method: Protein Homology.; valine--tRNA ligase 197963..200533 Candidatus Phytoplasma rubi RS022_RS01100 CDS RS022_RS01100 NZ_CP114006.1 201018 203825 D Derived by automated computational analysis using gene prediction method: Protein Homology.; cation-transporting P-type ATPase 201018..203825 Candidatus Phytoplasma rubi RS022_RS01105 CDS pth NZ_CP114006.1 203880 204455 D Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoacyl-tRNA hydrolase 203880..204455 Candidatus Phytoplasma rubi RS022_RS01140 CDS RS022_RS01140 NZ_CP114006.1 209716 211857 D Derived by automated computational analysis using gene prediction method: Protein Homology.; polyribonucleotide nucleotidyltransferase 209716..211857 Candidatus Phytoplasma rubi RS022_RS01145 CDS RS022_RS01145 NZ_CP114006.1 213055 213180 R Derived by automated computational analysis using gene prediction method: Protein Homology.; OB-fold domain-containing protein complement(213055..213180) Candidatus Phytoplasma rubi RS022_RS01150 CDS RS022_RS01150 NZ_CP114006.1 213406 216306 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 213406..216306 Candidatus Phytoplasma rubi RS022_RS01155 CDS RS022_RS01155 NZ_CP114006.1 216457 216993 D Derived by automated computational analysis using gene prediction method: Protein Homology.; helix-turn-helix transcriptional regulator 216457..216993 Candidatus Phytoplasma rubi RS022_RS01160 CDS tpiA NZ_CP114006.1 217794 218525 D Derived by automated computational analysis using gene prediction method: Protein Homology.; triose-phosphate isomerase 217794..218525 Candidatus Phytoplasma rubi RS022_RS01165 CDS RS022_RS01165 NZ_CP114006.1 218571 220772 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent helicase 218571..220772 Candidatus Phytoplasma rubi RS022_RS01170 CDS RS022_RS01170 NZ_CP114006.1 221994 222146 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(221994..222146) Candidatus Phytoplasma rubi RS022_RS01175 CDS RS022_RS01175 NZ_CP114006.1 222409 223371 R Derived by automated computational analysis using gene prediction method: Protein Homology.; L-lactate dehydrogenase complement(222409..223371) Candidatus Phytoplasma rubi RS022_RS01180 CDS RS022_RS01180 NZ_CP114006.1 224801 225238 D Derived by automated computational analysis using gene prediction method: Protein Homology.; Spx/MgsR family RNA polymerase-binding regulatory protein 224801..225238 Candidatus Phytoplasma rubi RS022_RS01185 CDS RS022_RS01185 NZ_CP114006.1 225562 226026 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 225562..226026 Candidatus Phytoplasma rubi RS022_RS01190 CDS RS022_RS01190 NZ_CP114006.1 226185 227126 D Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine-type recombinase/integrase 226185..227126 Candidatus Phytoplasma rubi RS022_RS01195 CDS RS022_RS01195 NZ_CP114006.1 227133 227591 D catalyzes the formation of dUMP from dUTP; Derived by automated computational analysis using gene prediction method: Protein Homology.; dUTP diphosphatase 227133..227591 Candidatus Phytoplasma rubi RS022_RS01200 CDS rpsB NZ_CP114006.1 227840 228616 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S2 227840..228616 Candidatus Phytoplasma rubi RS022_RS01205 CDS tsf NZ_CP114006.1 228819 229658 D Derived by automated computational analysis using gene prediction method: Protein Homology.; translation elongation factor Ts 228819..229658 Candidatus Phytoplasma rubi RS022_RS01210 CDS pyrH NZ_CP114006.1 229749 230507 D Derived by automated computational analysis using gene prediction method: Protein Homology.; UMP kinase 229749..230507 Candidatus Phytoplasma rubi RS022_RS01215 CDS RS022_RS01215 NZ_CP114006.1 230500 231048 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome recycling factor 230500..231048 Candidatus Phytoplasma rubi RS022_RS01220 CDS RS022_RS01220 NZ_CP114006.1 231051 231968 D Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidate cytidylyltransferase 231051..231968 Candidatus Phytoplasma rubi RS022_RS01225 CDS rpmB NZ_CP114006.1 232032 232220 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L28 complement(232032..232220) Candidatus Phytoplasma rubi RS022_RS01230 CDS RS022_RS01230 NZ_CP114006.1 232497 234116 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DAK2 domain-containing protein 232497..234116 Candidatus Phytoplasma rubi RS022_RS01240 CDS RS022_RS01240 NZ_CP114006.1 234523 235314 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HAD family hydrolase 234523..235314 Candidatus Phytoplasma rubi RS022_RS01245 CDS RS022_RS01245 NZ_CP114006.1 235403 236035 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF4194 domain-containing protein 235403..236035 Candidatus Phytoplasma rubi RS022_RS01250 CDS RS022_RS01250 NZ_CP114006.1 236019 239291 D Derived by automated computational analysis using gene prediction method: Protein Homology.; SbcC/MukB-like Walker B domain-containing protein 236019..239291 Candidatus Phytoplasma rubi RS022_RS01255 CDS RS022_RS01255 NZ_CP114006.1 239652 240266 D Derived by automated computational analysis using gene prediction method: Protein Homology.; signal peptidase I 239652..240266 Candidatus Phytoplasma rubi RS022_RS01260 CDS RS022_RS01260 NZ_CP114006.1 240277 240927 D Derived by automated computational analysis using gene prediction method: Protein Homology.; uracil-DNA glycosylase 240277..240927 Candidatus Phytoplasma rubi RS022_RS01265 CDS rnhC NZ_CP114006.1 240971 241924 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease HIII 240971..241924 Candidatus Phytoplasma rubi RS022_RS01270 CDS RS022_RS01270 NZ_CP114006.1 242066 242485 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HIT domain-containing protein 242066..242485 Candidatus Phytoplasma rubi RS022_RS01275 CDS RS022_RS01275 NZ_CP114006.1 242540 243184 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hemolysin III family protein 242540..243184 Candidatus Phytoplasma rubi RS022_RS01280 CDS RS022_RS01280 NZ_CP114006.1 243241 243564 D Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic-di-AMP receptor 243241..243564 Candidatus Phytoplasma rubi RS022_RS01285 CDS RS022_RS01285 NZ_CP114006.1 243610 243840 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S15 243610..243840 Candidatus Phytoplasma rubi RS022_RS01300 CDS RS022_RS01300 NZ_CP114006.1 244288 244638 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; cold shock domain-containing protein 244288..244638 Candidatus Phytoplasma rubi RS022_RS01305 CDS metK NZ_CP114006.1 244762 245919 D Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine adenosyltransferase 244762..245919 Candidatus Phytoplasma rubi RS022_RS01310 CDS proS NZ_CP114006.1 245975 247399 D Derived by automated computational analysis using gene prediction method: Protein Homology.; proline--tRNA ligase 245975..247399 Candidatus Phytoplasma rubi RS022_RS01315 CDS der NZ_CP114006.1 247645 248967 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome biogenesis GTPase Der 247645..248967 Candidatus Phytoplasma rubi RS022_RS01320 CDS RS022_RS01320 NZ_CP114006.1 248967 249953 D Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 248967..249953 Candidatus Phytoplasma rubi RS022_RS01325 CDS RS022_RS01325 NZ_CP114006.1 250072 250380 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 250072..250380 Candidatus Phytoplasma rubi RS022_RS01330 CDS rpmG NZ_CP114006.1 250509 250658 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L33 250509..250658 Candidatus Phytoplasma rubi RS022_RS01335 CDS RS022_RS01335 NZ_CP114006.1 250682 251935 D Derived by automated computational analysis using gene prediction method: Protein Homology.; aminopeptidase P N-terminal domain-containing protein 250682..251935 Candidatus Phytoplasma rubi RS022_RS01345 CDS plsY NZ_CP114006.1 252170 252820 R Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate 1-O-acyltransferase PlsY complement(252170..252820) Candidatus Phytoplasma rubi RS022_RS01350 CDS RS022_RS01350 NZ_CP114006.1 253518 253983 R frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(<253518..253983) Candidatus Phytoplasma rubi RS022_RS01355 CDS RS022_RS01355 NZ_CP114006.1 254031 255357 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(254031..255357) Candidatus Phytoplasma rubi RS022_RS01360 CDS RS022_RS01360 NZ_CP114006.1 255370 256194 R frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(255370..>256194) Candidatus Phytoplasma rubi RS022_RS01365 CDS RS022_RS01365 NZ_CP114006.1 256197 256641 R frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(<256197..256641) Candidatus Phytoplasma rubi RS022_RS01370 CDS RS022_RS01370 NZ_CP114006.1 256707 256913 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(256707..256913) Candidatus Phytoplasma rubi RS022_RS01375 CDS RS022_RS01375 NZ_CP114006.1 256939 257157 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(256939..257157) Candidatus Phytoplasma rubi RS022_RS01380 CDS RS022_RS01380 NZ_CP114006.1 257254 257613 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(257254..257613) Candidatus Phytoplasma rubi RS022_RS01385 CDS RS022_RS01385 NZ_CP114006.1 257630 258085 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(257630..258085) Candidatus Phytoplasma rubi RS022_RS04120 CDS RS022_RS04120 NZ_CP114006.1 258484 258888 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(258484..258888) Candidatus Phytoplasma rubi RS022_RS01395 CDS RS022_RS01395 NZ_CP114006.1 258955 259577 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATPase complement(258955..259577) Candidatus Phytoplasma rubi RS022_RS01400 CDS RS022_RS01400 NZ_CP114006.1 259731 260126 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(259731..260126) Candidatus Phytoplasma rubi RS022_RS01405 CDS RS022_RS01405 NZ_CP114006.1 260050 260898 R internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(260050..260898) Candidatus Phytoplasma rubi RS022_RS01410 CDS RS022_RS01410 NZ_CP114006.1 260905 261174 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(260905..261174) Candidatus Phytoplasma rubi RS022_RS01415 CDS RS022_RS01415 NZ_CP114006.1 261281 261550 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(261281..261550) Candidatus Phytoplasma rubi RS022_RS01420 CDS RS022_RS01420 NZ_CP114006.1 261947 262135 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(261947..262135) Candidatus Phytoplasma rubi RS022_RS01425 CDS RS022_RS01425 NZ_CP114006.1 262170 262688 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein complement(262170..262688) Candidatus Phytoplasma rubi RS022_RS01430 CDS RS022_RS01430 NZ_CP114006.1 262709 263557 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(262709..263557) Candidatus Phytoplasma rubi RS022_RS01435 CDS RS022_RS01435 NZ_CP114006.1 263629 263919 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(263629..263919) Candidatus Phytoplasma rubi RS022_RS01440 CDS RS022_RS01440 NZ_CP114006.1 264005 264334 R Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein complement(264005..264334) Candidatus Phytoplasma rubi RS022_RS01445 CDS RS022_RS01445 NZ_CP114006.1 264575 265189 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(264575..265189) Candidatus Phytoplasma rubi RS022_RS01450 CDS RS022_RS01450 NZ_CP114006.1 265822 266010 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 265822..266010 Candidatus Phytoplasma rubi RS022_RS01455 CDS pheS NZ_CP114006.1 266661 267692 D Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylalanine--tRNA ligase subunit alpha 266661..267692 Candidatus Phytoplasma rubi RS022_RS01460 CDS pheT NZ_CP114006.1 267745 270126 D Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylalanine--tRNA ligase subunit beta 267745..270126 Candidatus Phytoplasma rubi RS022_RS01465 CDS rsgA NZ_CP114006.1 270160 271077 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome small subunit-dependent GTPase A 270160..271077 Candidatus Phytoplasma rubi RS022_RS01470 CDS lepA NZ_CP114006.1 271131 272954 D Derived by automated computational analysis using gene prediction method: Protein Homology.; translation elongation factor 4 271131..272954 Candidatus Phytoplasma rubi RS022_RS01475 CDS RS022_RS01475 NZ_CP114006.1 272996 274312 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein 272996..274312 Candidatus Phytoplasma rubi RS022_RS01480 CDS RS022_RS01480 NZ_CP114006.1 274318 275160 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter permease 274318..275160 Candidatus Phytoplasma rubi RS022_RS01485 CDS RS022_RS01485 NZ_CP114006.1 275153 275941 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter permease 275153..275941 Candidatus Phytoplasma rubi RS022_RS01490 CDS RS022_RS01490 NZ_CP114006.1 275948 277111 D Derived by automated computational analysis using gene prediction method: Protein Homology.; extracellular solute-binding protein 275948..277111 Candidatus Phytoplasma rubi RS022_RS01495 CDS RS022_RS01495 NZ_CP114006.1 277658 277831 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 277658..277831 Candidatus Phytoplasma rubi RS022_RS01500 CDS RS022_RS01500 NZ_CP114006.1 277877 278479 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DDE-type integrase/transposase/recombinase 277877..278479 Candidatus Phytoplasma rubi RS022_RS04125 CDS RS022_RS04125 NZ_CP114006.1 279006 279652 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(279006..279652) Candidatus Phytoplasma rubi RS022_RS01515 CDS RS022_RS01515 NZ_CP114006.1 279812 281140 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(279812..281140) Candidatus Phytoplasma rubi RS022_RS01520 CDS RS022_RS01520 NZ_CP114006.1 281153 282651 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(281153..282651) Candidatus Phytoplasma rubi RS022_RS01525 CDS RS022_RS01525 NZ_CP114006.1 282671 283250 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(282671..283250) Candidatus Phytoplasma rubi RS022_RS01530 CDS RS022_RS01530 NZ_CP114006.1 283449 284063 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(283449..284063) Candidatus Phytoplasma rubi RS022_RS01535 CDS uvrC NZ_CP114006.1 284773 286380 D Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit UvrC 284773..286380 Candidatus Phytoplasma rubi RS022_RS01540 CDS uvrA NZ_CP114006.1 286524 289325 D Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit UvrA 286524..289325 Candidatus Phytoplasma rubi RS022_RS01545 CDS uvrB NZ_CP114006.1 289345 291318 D Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit UvrB 289345..291318 Candidatus Phytoplasma rubi RS022_RS01550 CDS RS022_RS01550 NZ_CP114006.1 291512 292393 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DegV family protein 291512..292393 Candidatus Phytoplasma rubi RS022_RS01555 CDS RS022_RS01555 NZ_CP114006.1 292421 293299 D Derived by automated computational analysis using gene prediction method: Protein Homology.; CCA tRNA nucleotidyltransferase 292421..293299 Candidatus Phytoplasma rubi RS022_RS01560 CDS RS022_RS01560 NZ_CP114006.1 293331 294266 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HD domain-containing protein 293331..294266 Candidatus Phytoplasma rubi RS022_RS01565 CDS RS022_RS01565 NZ_CP114006.1 294371 294679 D Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin family protein 294371..294679 Candidatus Phytoplasma rubi RS022_RS01570 CDS truB NZ_CP114006.1 294731 295582 D Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine(55) synthase TruB 294731..295582 Candidatus Phytoplasma rubi RS022_RS01575 CDS RS022_RS01575 NZ_CP114006.1 296378 297613 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein complement(296378..297613) Candidatus Phytoplasma rubi RS022_RS01580 CDS RS022_RS01580 NZ_CP114006.1 297672 298091 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(297672..298091) Candidatus Phytoplasma rubi RS022_RS01585 CDS RS022_RS01585 NZ_CP114006.1 298405 299339 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase complement(298405..299339) Candidatus Phytoplasma rubi RS022_RS01590 CDS RS022_RS01590 NZ_CP114006.1 299789 300451 R Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(299789..300451) Candidatus Phytoplasma rubi RS022_RS01595 CDS RS022_RS01595 NZ_CP114006.1 300609 301927 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(300609..301927) Candidatus Phytoplasma rubi RS022_RS01600 CDS RS022_RS01600 NZ_CP114006.1 301939 303432 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(301939..303432) Candidatus Phytoplasma rubi RS022_RS01605 CDS RS022_RS01605 NZ_CP114006.1 303451 304054 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(303451..304054) Candidatus Phytoplasma rubi RS022_RS01610 CDS RS022_RS01610 NZ_CP114006.1 304090 304224 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(304090..304224) Candidatus Phytoplasma rubi RS022_RS01615 CDS tmk NZ_CP114006.1 304224 304832 R Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase complement(304224..304832) Candidatus Phytoplasma rubi RS022_RS01620 CDS RS022_RS01620 NZ_CP114006.1 304892 305539 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(304892..305539) Candidatus Phytoplasma rubi RS022_RS01625 CDS RS022_RS01625 NZ_CP114006.1 305646 305792 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(305646..305792) Candidatus Phytoplasma rubi RS022_RS01630 CDS RS022_RS01630 NZ_CP114006.1 305803 305994 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(305803..305994) Candidatus Phytoplasma rubi RS022_RS04130 CDS RS022_RS04130 NZ_CP114006.1 306169 306795 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(306169..306795) Candidatus Phytoplasma rubi RS022_RS01640 CDS RS022_RS01640 NZ_CP114006.1 307740 308201 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(307740..308201) Candidatus Phytoplasma rubi RS022_RS01645 CDS RS022_RS01645 NZ_CP114006.1 308220 309008 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(308220..309008) Candidatus Phytoplasma rubi RS022_RS01650 CDS RS022_RS01650 NZ_CP114006.1 309111 310031 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA double-strand break repair protein Rad50 complement(309111..310031) Candidatus Phytoplasma rubi RS022_RS01655 CDS RS022_RS01655 NZ_CP114006.1 310313 310777 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(310313..310777) Candidatus Phytoplasma rubi RS022_RS01660 CDS RS022_RS01660 NZ_CP114006.1 310777 311958 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein complement(310777..311958) Candidatus Phytoplasma rubi RS022_RS01665 CDS RS022_RS01665 NZ_CP114006.1 312086 312685 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(312086..312685) Candidatus Phytoplasma rubi RS022_RS01670 CDS RS022_RS01670 NZ_CP114006.1 312688 312954 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(312688..312954) Candidatus Phytoplasma rubi RS022_RS01675 CDS RS022_RS01675 NZ_CP114006.1 313144 313434 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(313144..313434) Candidatus Phytoplasma rubi RS022_RS01680 CDS RS022_RS01680 NZ_CP114006.1 313479 313847 R Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein complement(313479..313847) Candidatus Phytoplasma rubi RS022_RS01685 CDS RS022_RS01685 NZ_CP114006.1 314086 314691 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(314086..314691) Candidatus Phytoplasma rubi RS022_RS01690 CDS RS022_RS01690 NZ_CP114006.1 314814 315038 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(314814..315038) Candidatus Phytoplasma rubi RS022_RS01695 CDS gtfA NZ_CP114006.1 315441 316904 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sucrose phosphorylase complement(315441..316904) Candidatus Phytoplasma rubi RS022_RS01700 CDS efp NZ_CP114006.1 317278 317856 R Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor P complement(317278..317856) Candidatus Phytoplasma rubi RS022_RS01705 CDS miaA NZ_CP114006.1 317910 318743 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA complement(317910..318743) Candidatus Phytoplasma rubi RS022_RS01710 CDS RS022_RS01710 NZ_CP114006.1 318805 319578 R Derived by automated computational analysis using gene prediction method: Protein Homology.; TIGR00282 family metallophosphoesterase complement(318805..319578) Candidatus Phytoplasma rubi RS022_RS01715 CDS rny NZ_CP114006.1 319628 321181 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease Y complement(319628..321181) Candidatus Phytoplasma rubi RS022_RS01720 CDS RS022_RS01720 NZ_CP114006.1 321659 321973 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(321659..321973) Candidatus Phytoplasma rubi RS022_RS01725 CDS RS022_RS01725 NZ_CP114006.1 322589 322849 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(322589..322849) Candidatus Phytoplasma rubi RS022_RS01730 CDS ftsH NZ_CP114006.1 323331 325097 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent zinc metalloprotease FtsH 323331..325097 Candidatus Phytoplasma rubi RS022_RS01745 CDS RS022_RS01745 NZ_CP114006.1 325927 328668 R Derived by automated computational analysis using gene prediction method: Protein Homology.; cation-transporting P-type ATPase complement(325927..328668) Candidatus Phytoplasma rubi RS022_RS01750 CDS RS022_RS01750 NZ_CP114006.1 328801 330072 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hemolysin family protein complement(328801..330072) Candidatus Phytoplasma rubi RS022_RS01755 CDS RS022_RS01755 NZ_CP114006.1 330452 330743 R frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease complement(<330452..330743) Candidatus Phytoplasma rubi RS022_RS01760 CDS RS022_RS01760 NZ_CP114006.1 332998 333636 D Derived by automated computational analysis using gene prediction method: Protein Homology.; CDP-alcohol phosphatidyltransferase family protein 332998..333636 Candidatus Phytoplasma rubi RS022_RS01765 CDS RS022_RS01765 NZ_CP114006.1 333791 334462 D internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase 333791..>334462 Candidatus Phytoplasma rubi RS022_RS04200 CDS RS022_RS04200 NZ_CP114006.1 334606 334665 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 334606..334665 Candidatus Phytoplasma rubi RS022_RS01770 CDS nrdF NZ_CP114006.1 334730 335776 D Derived by automated computational analysis using gene prediction method: Protein Homology.; class 1b ribonucleoside-diphosphate reductase subunit beta 334730..335776 Candidatus Phytoplasma rubi RS022_RS01775 CDS RS022_RS01775 NZ_CP114006.1 336349 337533 D Derived by automated computational analysis using gene prediction method: Protein Homology.; acetate kinase 336349..337533 Candidatus Phytoplasma rubi RS022_RS01785 CDS RS022_RS01785 NZ_CP114006.1 337827 338693 D Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidylate synthase 337827..338693 Candidatus Phytoplasma rubi RS022_RS01790 CDS RS022_RS01790 NZ_CP114006.1 338690 339172 D Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrofolate reductase 338690..339172 Candidatus Phytoplasma rubi RS022_RS01795 CDS RS022_RS01795 NZ_CP114006.1 339270 339992 D Derived by automated computational analysis using gene prediction method: Protein Homology.; lysophospholipid acyltransferase family protein 339270..339992 Candidatus Phytoplasma rubi RS022_RS01800 CDS pdhA NZ_CP114006.1 340566 341657 D Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 340566..341657 Candidatus Phytoplasma rubi RS022_RS01805 CDS RS022_RS01805 NZ_CP114006.1 341923 342936 D Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-ketoacid dehydrogenase subunit beta 341923..342936 Candidatus Phytoplasma rubi RS022_RS01810 CDS RS022_RS01810 NZ_CP114006.1 342943 343173 D Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin/lipoyl-containing protein 342943..343173 Candidatus Phytoplasma rubi RS022_RS01815 CDS RS022_RS01815 NZ_CP114006.1 343202 343960 D Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoamide acetyltransferase family protein 343202..343960 Candidatus Phytoplasma rubi RS022_RS01820 CDS lpdA NZ_CP114006.1 344010 345389 D Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoyl dehydrogenase 344010..345389 Candidatus Phytoplasma rubi RS022_RS01825 CDS RS022_RS01825 NZ_CP114006.1 345541 346302 D Derived by automated computational analysis using gene prediction method: Protein Homology.; TatD family hydrolase 345541..346302 Candidatus Phytoplasma rubi RS022_RS01830 CDS ligA NZ_CP114006.1 346985 348988 D Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent DNA ligase LigA 346985..348988 Candidatus Phytoplasma rubi RS022_RS01835 CDS acpS NZ_CP114006.1 349077 349421 D Derived by automated computational analysis using gene prediction method: Protein Homology.; holo-ACP synthase 349077..349421 Candidatus Phytoplasma rubi RS022_RS01840 CDS RS022_RS01840 NZ_CP114006.1 349463 350407 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(349463..350407) Candidatus Phytoplasma rubi RS022_RS01845 CDS RS022_RS01845 NZ_CP114006.1 350872 351036 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 350872..351036 Candidatus Phytoplasma rubi RS022_RS01850 CDS RS022_RS01850 NZ_CP114006.1 351086 351688 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 351086..351688 Candidatus Phytoplasma rubi RS022_RS01855 CDS RS022_RS01855 NZ_CP114006.1 351943 352254 D Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 351943..352254 Candidatus Phytoplasma rubi RS022_RS01860 CDS RS022_RS01860 NZ_CP114006.1 352403 352597 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 352403..352597 Candidatus Phytoplasma rubi RS022_RS01865 CDS RS022_RS01865 NZ_CP114006.1 352572 353402 D Derived by automated computational analysis using gene prediction method: Protein Homology.; Dam family site-specific DNA-(adenine-N6)-methyltransferase 352572..353402 Candidatus Phytoplasma rubi RS022_RS01870 CDS RS022_RS01870 NZ_CP114006.1 353479 353781 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 353479..353781 Candidatus Phytoplasma rubi RS022_RS01875 CDS RS022_RS01875 NZ_CP114006.1 353967 354257 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 353967..354257 Candidatus Phytoplasma rubi RS022_RS01880 CDS RS022_RS01880 NZ_CP114006.1 354446 354712 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 354446..354712 Candidatus Phytoplasma rubi RS022_RS04135 CDS RS022_RS04135 NZ_CP114006.1 354715 354948 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 354715..354948 Candidatus Phytoplasma rubi RS022_RS04140 CDS RS022_RS04140 NZ_CP114006.1 354979 355314 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 354979..355314 Candidatus Phytoplasma rubi RS022_RS01890 CDS RS022_RS01890 NZ_CP114006.1 355442 356224 D incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase 355442..>356224 Candidatus Phytoplasma rubi RS022_RS04145 CDS RS022_RS04145 NZ_CP114006.1 356557 357493 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase complement(356557..357493) Candidatus Phytoplasma rubi RS022_RS01900 CDS RS022_RS01900 NZ_CP114006.1 357954 358580 R Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(357954..358580) Candidatus Phytoplasma rubi RS022_RS01905 CDS RS022_RS01905 NZ_CP114006.1 358721 360044 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(358721..360044) Candidatus Phytoplasma rubi RS022_RS01910 CDS RS022_RS01910 NZ_CP114006.1 360056 361545 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(360056..361545) Candidatus Phytoplasma rubi RS022_RS01915 CDS RS022_RS01915 NZ_CP114006.1 361564 362169 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(361564..362169) Candidatus Phytoplasma rubi RS022_RS01920 CDS RS022_RS01920 NZ_CP114006.1 362205 362354 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(362205..362354) Candidatus Phytoplasma rubi RS022_RS01930 CDS RS022_RS01930 NZ_CP114006.1 363028 363666 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(363028..363666) Candidatus Phytoplasma rubi RS022_RS01935 CDS RS022_RS01935 NZ_CP114006.1 363672 363920 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(363672..363920) Candidatus Phytoplasma rubi RS022_RS01940 CDS RS022_RS01940 NZ_CP114006.1 363904 364119 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(363904..364119) Candidatus Phytoplasma rubi RS022_RS01945 CDS RS022_RS01945 NZ_CP114006.1 364179 364436 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(364179..364436) Candidatus Phytoplasma rubi RS022_RS01950 CDS RS022_RS01950 NZ_CP114006.1 364822 365067 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; SVM family protein complement(364822..365067) Candidatus Phytoplasma rubi RS022_RS01955 CDS RS022_RS01955 NZ_CP114006.1 365103 365840 R Derived by automated computational analysis using gene prediction method: Protein Homology.; effector complement(365103..365840) Candidatus Phytoplasma rubi RS022_RS01960 CDS RS022_RS01960 NZ_CP114006.1 365907 367094 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(365907..367094) Candidatus Phytoplasma rubi RS022_RS01965 CDS RS022_RS01965 NZ_CP114006.1 367018 367410 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(367018..367410) Candidatus Phytoplasma rubi RS022_RS01970 CDS RS022_RS01970 NZ_CP114006.1 367368 367874 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(367368..367874) Candidatus Phytoplasma rubi RS022_RS01975 CDS RS022_RS01975 NZ_CP114006.1 367881 368150 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(367881..368150) Candidatus Phytoplasma rubi RS022_RS01980 CDS RS022_RS01980 NZ_CP114006.1 368235 369503 R Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase complement(368235..369503) Candidatus Phytoplasma rubi RS022_RS01985 CDS RS022_RS01985 NZ_CP114006.1 369596 369865 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(369596..369865) Candidatus Phytoplasma rubi RS022_RS01990 CDS RS022_RS01990 NZ_CP114006.1 369843 370127 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(369843..370127) Candidatus Phytoplasma rubi RS022_RS01995 CDS RS022_RS01995 NZ_CP114006.1 370560 370850 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(370560..370850) Candidatus Phytoplasma rubi RS022_RS02000 CDS RS022_RS02000 NZ_CP114006.1 370936 371262 R Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein complement(370936..371262) Candidatus Phytoplasma rubi RS022_RS02005 CDS RS022_RS02005 NZ_CP114006.1 371503 372106 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(371503..372106) Candidatus Phytoplasma rubi RS022_RS02010 CDS RS022_RS02010 NZ_CP114006.1 372267 372647 D incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent Zn protease <372267..372647 Candidatus Phytoplasma rubi RS022_RS02015 CDS RS022_RS02015 NZ_CP114006.1 372650 374320 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA double-strand break repair protein Rad50 372650..374320 Candidatus Phytoplasma rubi RS022_RS02020 CDS RS022_RS02020 NZ_CP114006.1 374422 375213 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 374422..375213 Candidatus Phytoplasma rubi RS022_RS02025 CDS RS022_RS02025 NZ_CP114006.1 375238 375711 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 375238..375711 Candidatus Phytoplasma rubi RS022_RS02030 CDS RS022_RS02030 NZ_CP114006.1 375814 376197 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 375814..376197 Candidatus Phytoplasma rubi RS022_RS04150 CDS RS022_RS04150 NZ_CP114006.1 376963 377694 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 376963..377694 Candidatus Phytoplasma rubi RS022_RS02040 CDS RS022_RS02040 NZ_CP114006.1 377771 377962 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 377771..377962 Candidatus Phytoplasma rubi RS022_RS02045 CDS RS022_RS02045 NZ_CP114006.1 377973 378221 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 377973..378221 Candidatus Phytoplasma rubi RS022_RS02050 CDS RS022_RS02050 NZ_CP114006.1 378227 378867 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein 378227..378867 Candidatus Phytoplasma rubi RS022_RS02055 CDS RS022_RS02055 NZ_CP114006.1 378942 379265 D Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase 378942..379265 Candidatus Phytoplasma rubi RS022_RS02060 CDS RS022_RS02060 NZ_CP114006.1 379280 379567 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 379280..379567 Candidatus Phytoplasma rubi RS022_RS02065 CDS RS022_RS02065 NZ_CP114006.1 379551 379700 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 379551..379700 Candidatus Phytoplasma rubi RS022_RS02070 CDS RS022_RS02070 NZ_CP114006.1 379739 380344 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 379739..380344 Candidatus Phytoplasma rubi RS022_RS02075 CDS RS022_RS02075 NZ_CP114006.1 380363 381856 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein 380363..381856 Candidatus Phytoplasma rubi RS022_RS02080 CDS RS022_RS02080 NZ_CP114006.1 381868 383192 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein 381868..383192 Candidatus Phytoplasma rubi RS022_RS02085 CDS RS022_RS02085 NZ_CP114006.1 383335 383961 D Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein 383335..383961 Candidatus Phytoplasma rubi RS022_RS02090 CDS RS022_RS02090 NZ_CP114006.1 384333 385019 R incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase complement(384333..>385019) Candidatus Phytoplasma rubi RS022_RS02095 CDS RS022_RS02095 NZ_CP114006.1 385035 385289 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(385035..385289) Candidatus Phytoplasma rubi RS022_RS02100 CDS RS022_RS02100 NZ_CP114006.1 385919 386161 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 385919..386161 Candidatus Phytoplasma rubi RS022_RS02105 CDS RS022_RS02105 NZ_CP114006.1 387125 387643 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DJ-1/PfpI family protein 387125..387643 Candidatus Phytoplasma rubi RS022_RS02110 CDS RS022_RS02110 NZ_CP114006.1 387791 389278 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-hydroxycarboxylate transporter family protein 387791..389278 Candidatus Phytoplasma rubi RS022_RS02115 CDS RS022_RS02115 NZ_CP114006.1 390232 390870 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 390232..390870 Candidatus Phytoplasma rubi RS022_RS02120 CDS RS022_RS02120 NZ_CP114006.1 391385 391986 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 391385..391986 Candidatus Phytoplasma rubi RS022_RS02125 CDS RS022_RS02125 NZ_CP114006.1 393416 393793 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 393416..393793 Candidatus Phytoplasma rubi RS022_RS02130 CDS RS022_RS02130 NZ_CP114006.1 393900 394130 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 393900..394130 Candidatus Phytoplasma rubi RS022_RS02135 CDS RS022_RS02135 NZ_CP114006.1 394103 394339 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 394103..394339 Candidatus Phytoplasma rubi RS022_RS02140 CDS RS022_RS02140 NZ_CP114006.1 394429 395031 D Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 394429..395031 Candidatus Phytoplasma rubi RS022_RS02145 CDS RS022_RS02145 NZ_CP114006.1 395351 395758 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 395351..395758 Candidatus Phytoplasma rubi RS022_RS02150 CDS RS022_RS02150 NZ_CP114006.1 395748 396059 D Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 395748..396059 Candidatus Phytoplasma rubi RS022_RS02155 CDS RS022_RS02155 NZ_CP114006.1 396208 396360 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 396208..396360 Candidatus Phytoplasma rubi RS022_RS02160 CDS RS022_RS02160 NZ_CP114006.1 396378 397133 D Derived by automated computational analysis using gene prediction method: Protein Homology.; Dam family site-specific DNA-(adenine-N6)-methyltransferase 396378..397133 Candidatus Phytoplasma rubi RS022_RS02165 CDS RS022_RS02165 NZ_CP114006.1 397386 397586 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 397386..397586 Candidatus Phytoplasma rubi RS022_RS02170 CDS RS022_RS02170 NZ_CP114006.1 397610 397732 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 397610..397732 Candidatus Phytoplasma rubi RS022_RS02175 CDS RS022_RS02175 NZ_CP114006.1 397710 398002 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 397710..398002 Candidatus Phytoplasma rubi RS022_RS02180 CDS RS022_RS02180 NZ_CP114006.1 398220 398723 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 398220..398723 Candidatus Phytoplasma rubi RS022_RS02185 CDS RS022_RS02185 NZ_CP114006.1 398929 399441 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 398929..399441 Candidatus Phytoplasma rubi RS022_RS02190 CDS RS022_RS02190 NZ_CP114006.1 399642 400100 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 399642..400100 Candidatus Phytoplasma rubi RS022_RS02195 CDS RS022_RS02195 NZ_CP114006.1 400104 400518 D frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; effector <400104..400518 Candidatus Phytoplasma rubi RS022_RS02200 CDS RS022_RS02200 NZ_CP114006.1 400586 400924 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 400586..400924 Candidatus Phytoplasma rubi RS022_RS02210 CDS RS022_RS02210 NZ_CP114006.1 401088 401324 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 401088..401324 Candidatus Phytoplasma rubi RS022_RS02215 CDS RS022_RS02215 NZ_CP114006.1 401421 401867 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 401421..401867 Candidatus Phytoplasma rubi RS022_RS02220 CDS RS022_RS02220 NZ_CP114006.1 401873 402115 D incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein 401873..>402115 Candidatus Phytoplasma rubi RS022_RS02225 CDS RS022_RS02225 NZ_CP114006.1 402430 403353 D Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha/beta fold hydrolase 402430..403353 Candidatus Phytoplasma rubi RS022_RS02230 CDS RS022_RS02230 NZ_CP114006.1 403730 404365 R Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(403730..404365) Candidatus Phytoplasma rubi RS022_RS02235 CDS RS022_RS02235 NZ_CP114006.1 404960 405136 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(404960..405136) Candidatus Phytoplasma rubi RS022_RS02240 CDS RS022_RS02240 NZ_CP114006.1 408788 409117 D Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 408788..409117 Candidatus Phytoplasma rubi RS022_RS02245 CDS RS022_RS02245 NZ_CP114006.1 409203 409493 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 409203..409493 Candidatus Phytoplasma rubi RS022_RS02250 CDS RS022_RS02250 NZ_CP114006.1 409536 410198 D incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase 409536..>410198 Candidatus Phytoplasma rubi RS022_RS02255 CDS RS022_RS02255 NZ_CP114006.1 410180 410290 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA adenine methylase complement(410180..410290) Candidatus Phytoplasma rubi RS022_RS02260 CDS RS022_RS02260 NZ_CP114006.1 410301 410495 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(410301..410495) Candidatus Phytoplasma rubi RS022_RS02265 CDS RS022_RS02265 NZ_CP114006.1 410627 410956 R Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein complement(410627..410956) Candidatus Phytoplasma rubi RS022_RS02270 CDS RS022_RS02270 NZ_CP114006.1 411324 411905 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(411324..411905) Candidatus Phytoplasma rubi RS022_RS02275 CDS RS022_RS02275 NZ_CP114006.1 412051 412746 D frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein <412051..412746 Candidatus Phytoplasma rubi RS022_RS02280 CDS RS022_RS02280 NZ_CP114006.1 412758 414081 D frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein 412758..414081 Candidatus Phytoplasma rubi RS022_RS04155 CDS RS022_RS04155 NZ_CP114006.1 414238 414876 D internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein 414238..414876 Candidatus Phytoplasma rubi RS022_RS02295 CDS RS022_RS02295 NZ_CP114006.1 415399 416178 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 415399..416178 Candidatus Phytoplasma rubi RS022_RS02300 CDS RS022_RS02300 NZ_CP114006.1 416179 416561 D frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein <416179..416561 Candidatus Phytoplasma rubi RS022_RS02305 CDS RS022_RS02305 NZ_CP114006.1 417044 417580 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 417044..417580 Candidatus Phytoplasma rubi RS022_RS02310 CDS RS022_RS02310 NZ_CP114006.1 417785 418726 D internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase 417785..418726 Candidatus Phytoplasma rubi RS022_RS02315 CDS RS022_RS02315 NZ_CP114006.1 419060 419353 R frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(<419060..419353) Candidatus Phytoplasma rubi RS022_RS02320 CDS RS022_RS02320 NZ_CP114006.1 419424 419606 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(419424..419606) Candidatus Phytoplasma rubi RS022_RS02325 CDS RS022_RS02325 NZ_CP114006.1 419579 419806 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(419579..419806) Candidatus Phytoplasma rubi RS022_RS02330 CDS RS022_RS02330 NZ_CP114006.1 419940 420395 R Derived by automated computational analysis using gene prediction method: Protein Homology.; effector protein complement(419940..420395) Candidatus Phytoplasma rubi RS022_RS02335 CDS RS022_RS02335 NZ_CP114006.1 420590 421327 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; effector complement(420590..421327) Candidatus Phytoplasma rubi RS022_RS02340 CDS RS022_RS02340 NZ_CP114006.1 421400 422017 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATPase complement(421400..422017) Candidatus Phytoplasma rubi RS022_RS02345 CDS RS022_RS02345 NZ_CP114006.1 422204 422449 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(422204..422449) Candidatus Phytoplasma rubi RS022_RS02350 CDS RS022_RS02350 NZ_CP114006.1 422487 423337 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(422487..423337) Candidatus Phytoplasma rubi RS022_RS02355 CDS RS022_RS02355 NZ_CP114006.1 423480 423644 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(423480..423644) Candidatus Phytoplasma rubi RS022_RS02365 CDS lysS NZ_CP114006.1 425091 426596 D Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine--tRNA ligase 425091..426596 Candidatus Phytoplasma rubi RS022_RS02370 CDS RS022_RS02370 NZ_CP114006.1 426661 429360 D Derived by automated computational analysis using gene prediction method: Protein Homology.; PHP domain-containing protein 426661..429360 Candidatus Phytoplasma rubi RS022_RS02375 CDS RS022_RS02375 NZ_CP114006.1 429417 429869 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 429417..429869 Candidatus Phytoplasma rubi RS022_RS02380 CDS RS022_RS02380 NZ_CP114006.1 429938 430516 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 429938..430516 Candidatus Phytoplasma rubi RS022_RS02385 CDS RS022_RS02385 NZ_CP114006.1 430708 431640 D Derived by automated computational analysis using gene prediction method: Protein Homology.; rhodanese-related sulfurtransferase 430708..431640 Candidatus Phytoplasma rubi RS022_RS02390 CDS rplU NZ_CP114006.1 431861 432178 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L21 431861..432178 Candidatus Phytoplasma rubi RS022_RS02395 CDS RS022_RS02395 NZ_CP114006.1 432186 432497 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal-processing cysteine protease Prp 432186..432497 Candidatus Phytoplasma rubi RS022_RS02400 CDS rpmA NZ_CP114006.1 432519 432815 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L27 432519..432815 Candidatus Phytoplasma rubi RS022_RS02405 CDS obgE NZ_CP114006.1 432828 434120 D Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase ObgE 432828..434120 Candidatus Phytoplasma rubi RS022_RS02410 CDS RS022_RS02410 NZ_CP114006.1 434155 434733 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 434155..434733 Candidatus Phytoplasma rubi RS022_RS02415 CDS RS022_RS02415 NZ_CP114006.1 435577 436947 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 435577..436947 Candidatus Phytoplasma rubi RS022_RS02420 CDS RS022_RS02420 NZ_CP114006.1 437038 437835 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 437038..437835 Candidatus Phytoplasma rubi RS022_RS02425 CDS RS022_RS02425 NZ_CP114006.1 437885 439579 D Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase 437885..439579 Candidatus Phytoplasma rubi RS022_RS02430 CDS RS022_RS02430 NZ_CP114006.1 439605 442901 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 439605..442901 Candidatus Phytoplasma rubi RS022_RS02435 CDS RS022_RS02435 NZ_CP114006.1 442894 443538 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 442894..443538 Candidatus Phytoplasma rubi RS022_RS02440 CDS RS022_RS02440 NZ_CP114006.1 443858 444422 D frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 443858..444422 Candidatus Phytoplasma rubi RS022_RS02445 CDS RS022_RS02445 NZ_CP114006.1 444805 445132 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 444805..445132 Candidatus Phytoplasma rubi RS022_RS02450 CDS RS022_RS02450 NZ_CP114006.1 445218 445508 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 445218..445508 Candidatus Phytoplasma rubi RS022_RS02455 CDS RS022_RS02455 NZ_CP114006.1 445698 445871 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 445698..445871 Candidatus Phytoplasma rubi RS022_RS02460 CDS RS022_RS02460 NZ_CP114006.1 446437 447135 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 446437..447135 Candidatus Phytoplasma rubi RS022_RS04160 CDS RS022_RS04160 NZ_CP114006.1 447633 447815 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 447633..447815 Candidatus Phytoplasma rubi RS022_RS02470 CDS RS022_RS02470 NZ_CP114006.1 448149 448934 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 448149..448934 Candidatus Phytoplasma rubi RS022_RS02475 CDS RS022_RS02475 NZ_CP114006.1 448873 449919 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 448873..449919 Candidatus Phytoplasma rubi RS022_RS02480 CDS RS022_RS02480 NZ_CP114006.1 450096 450974 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 450096..450974 Candidatus Phytoplasma rubi RS022_RS02485 CDS RS022_RS02485 NZ_CP114006.1 451009 451575 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 451009..451575 Candidatus Phytoplasma rubi RS022_RS02490 CDS RS022_RS02490 NZ_CP114006.1 451631 451960 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 451631..451960 Candidatus Phytoplasma rubi RS022_RS02495 CDS RS022_RS02495 NZ_CP114006.1 452060 452506 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 452060..452506 Candidatus Phytoplasma rubi RS022_RS02500 CDS RS022_RS02500 NZ_CP114006.1 452512 453153 D Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein 452512..453153 Candidatus Phytoplasma rubi RS022_RS02505 CDS RS022_RS02505 NZ_CP114006.1 453321 453464 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 453321..453464 Candidatus Phytoplasma rubi RS022_RS02510 CDS RS022_RS02510 NZ_CP114006.1 453419 453676 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein 453419..453676 Candidatus Phytoplasma rubi RS022_RS02515 CDS RS022_RS02515 NZ_CP114006.1 455218 456690 D Derived by automated computational analysis using gene prediction method: Protein Homology.; leucyl aminopeptidase 455218..456690 Candidatus Phytoplasma rubi RS022_RS02520 CDS RS022_RS02520 NZ_CP114006.1 458523 458777 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(458523..458777) Candidatus Phytoplasma rubi RS022_RS02525 CDS RS022_RS02525 NZ_CP114006.1 459666 460904 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(459666..460904) Candidatus Phytoplasma rubi RS022_RS02530 CDS RS022_RS02530 NZ_CP114006.1 461756 461878 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(461756..461878) Candidatus Phytoplasma rubi RS022_RS02535 CDS RS022_RS02535 NZ_CP114006.1 461976 462395 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 461976..462395 Candidatus Phytoplasma rubi RS022_RS02540 CDS RS022_RS02540 NZ_CP114006.1 462436 463041 D Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 462436..463041 Candidatus Phytoplasma rubi RS022_RS02545 CDS RS022_RS02545 NZ_CP114006.1 463282 463611 D Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 463282..463611 Candidatus Phytoplasma rubi RS022_RS02550 CDS RS022_RS02550 NZ_CP114006.1 463721 463984 D Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein 463721..463984 Candidatus Phytoplasma rubi RS022_RS02555 CDS RS022_RS02555 NZ_CP114006.1 464027 465613 D Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase 464027..465613 Candidatus Phytoplasma rubi RS022_RS02560 CDS RS022_RS02560 NZ_CP114006.1 465583 466329 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 465583..466329 Candidatus Phytoplasma rubi RS022_RS02565 CDS RS022_RS02565 NZ_CP114006.1 466416 467332 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 466416..467332 Candidatus Phytoplasma rubi RS022_RS02570 CDS RS022_RS02570 NZ_CP114006.1 467241 468428 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 467241..468428 Candidatus Phytoplasma rubi RS022_RS02575 CDS RS022_RS02575 NZ_CP114006.1 468495 469220 D Derived by automated computational analysis using gene prediction method: Protein Homology.; effector 468495..469220 Candidatus Phytoplasma rubi RS022_RS02580 CDS RS022_RS02580 NZ_CP114006.1 469284 469664 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 469284..469664 Candidatus Phytoplasma rubi RS022_RS02585 CDS RS022_RS02585 NZ_CP114006.1 469722 470045 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 469722..470045 Candidatus Phytoplasma rubi RS022_RS02590 CDS RS022_RS02590 NZ_CP114006.1 470235 470597 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 470235..470597 Candidatus Phytoplasma rubi RS022_RS02595 CDS RS022_RS02595 NZ_CP114006.1 470632 470925 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 470632..470925 Candidatus Phytoplasma rubi RS022_RS02600 CDS RS022_RS02600 NZ_CP114006.1 471536 472177 D Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein 471536..472177 Candidatus Phytoplasma rubi RS022_RS02605 CDS RS022_RS02605 NZ_CP114006.1 472253 472531 D Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase 472253..472531 Candidatus Phytoplasma rubi RS022_RS02610 CDS RS022_RS02610 NZ_CP114006.1 472835 473791 D Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase 472835..473791 Candidatus Phytoplasma rubi RS022_RS02615 CDS RS022_RS02615 NZ_CP114006.1 474166 474793 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(474166..474793) Candidatus Phytoplasma rubi RS022_RS02620 CDS RS022_RS02620 NZ_CP114006.1 474931 476255 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(474931..476255) Candidatus Phytoplasma rubi RS022_RS02625 CDS RS022_RS02625 NZ_CP114006.1 476268 477761 R internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(476268..477761) Candidatus Phytoplasma rubi RS022_RS02630 CDS RS022_RS02630 NZ_CP114006.1 477779 478385 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(477779..478385) Candidatus Phytoplasma rubi RS022_RS02635 CDS RS022_RS02635 NZ_CP114006.1 478421 478555 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(478421..478555) Candidatus Phytoplasma rubi RS022_RS02640 CDS RS022_RS02640 NZ_CP114006.1 478555 479031 R Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase complement(478555..479031) Candidatus Phytoplasma rubi RS022_RS02645 CDS RS022_RS02645 NZ_CP114006.1 479013 479159 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(479013..479159) Candidatus Phytoplasma rubi RS022_RS02650 CDS RS022_RS02650 NZ_CP114006.1 479219 479868 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(479219..479868) Candidatus Phytoplasma rubi RS022_RS02655 CDS RS022_RS02655 NZ_CP114006.1 479975 480121 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(479975..480121) Candidatus Phytoplasma rubi RS022_RS02660 CDS RS022_RS02660 NZ_CP114006.1 480132 480323 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(480132..480323) Candidatus Phytoplasma rubi RS022_RS02665 CDS RS022_RS02665 NZ_CP114006.1 480547 481038 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(480547..481038) Candidatus Phytoplasma rubi RS022_RS02670 CDS RS022_RS02670 NZ_CP114006.1 481104 481799 R Derived by automated computational analysis using gene prediction method: Protein Homology.; effector complement(481104..481799) Candidatus Phytoplasma rubi RS022_RS02675 CDS RS022_RS02675 NZ_CP114006.1 482401 482595 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; sigma factor complement(482401..482595) Candidatus Phytoplasma rubi RS022_RS02680 CDS RS022_RS02680 NZ_CP114006.1 482690 482965 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 482690..482965 Candidatus Phytoplasma rubi RS022_RS02685 CDS RS022_RS02685 NZ_CP114006.1 483094 483249 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 483094..483249 Candidatus Phytoplasma rubi RS022_RS02690 CDS RS022_RS02690 NZ_CP114006.1 483263 483886 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 483263..483886 Candidatus Phytoplasma rubi RS022_RS02695 CDS RS022_RS02695 NZ_CP114006.1 483888 485380 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein 483888..485380 Candidatus Phytoplasma rubi RS022_RS02700 CDS RS022_RS02700 NZ_CP114006.1 485392 486717 D Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein 485392..486717 Candidatus Phytoplasma rubi RS022_RS02705 CDS RS022_RS02705 NZ_CP114006.1 486900 487537 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein 486900..487537 Candidatus Phytoplasma rubi RS022_RS02710 CDS RS022_RS02710 NZ_CP114006.1 487986 488923 D frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase 487986..488923 Candidatus Phytoplasma rubi RS022_RS02715 CDS RS022_RS02715 NZ_CP114006.1 489285 489431 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(489285..489431) Candidatus Phytoplasma rubi RS022_RS02720 CDS RS022_RS02720 NZ_CP114006.1 489456 490340 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(489456..490340) Candidatus Phytoplasma rubi RS022_RS04165 CDS RS022_RS04165 NZ_CP114006.1 490539 490967 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(490539..490967) Candidatus Phytoplasma rubi RS022_RS04170 CDS RS022_RS04170 NZ_CP114006.1 491497 491691 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(491497..491691) Candidatus Phytoplasma rubi RS022_RS02730 CDS RS022_RS02730 NZ_CP114006.1 492030 492389 R internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(492030..>492389) Candidatus Phytoplasma rubi RS022_RS02735 CDS RS022_RS02735 NZ_CP114006.1 492746 492943 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 492746..492943 Candidatus Phytoplasma rubi RS022_RS02740 CDS rpsD NZ_CP114006.1 493343 493942 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S4 493343..493942 Candidatus Phytoplasma rubi RS022_RS02745 CDS RS022_RS02745 NZ_CP114006.1 494329 495084 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA integrity scanning protein DisA nucleotide-binding domain protein 494329..495084 Candidatus Phytoplasma rubi RS022_RS02750 CDS RS022_RS02750 NZ_CP114006.1 495130 495999 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DegV family protein 495130..495999 Candidatus Phytoplasma rubi RS022_RS02755 CDS mscL NZ_CP114006.1 496047 496493 R Derived by automated computational analysis using gene prediction method: Protein Homology.; large conductance mechanosensitive channel protein MscL complement(496047..496493) Candidatus Phytoplasma rubi RS022_RS02760 CDS RS022_RS02760 NZ_CP114006.1 496868 497512 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 496868..497512 Candidatus Phytoplasma rubi RS022_RS02765 CDS RS022_RS02765 NZ_CP114006.1 497586 498008 R Derived by automated computational analysis using gene prediction method: Protein Homology.; Hsp20 family protein complement(497586..498008) Candidatus Phytoplasma rubi RS022_RS02790 CDS RS022_RS02790 NZ_CP114006.1 499073 499747 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(499073..499747) Candidatus Phytoplasma rubi RS022_RS02795 CDS RS022_RS02795 NZ_CP114006.1 500102 501298 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 500102..501298 Candidatus Phytoplasma rubi RS022_RS02800 CDS ftsH NZ_CP114006.1 501301 502899 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent zinc metalloprotease FtsH 501301..502899 Candidatus Phytoplasma rubi RS022_RS02805 CDS RS022_RS02805 NZ_CP114006.1 504352 504513 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 504352..504513 Candidatus Phytoplasma rubi RS022_RS02810 CDS RS022_RS02810 NZ_CP114006.1 504953 505891 R internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase complement(504953..505891) Candidatus Phytoplasma rubi RS022_RS04175 CDS RS022_RS04175 NZ_CP114006.1 506328 506964 R frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(506328..506964) Candidatus Phytoplasma rubi RS022_RS02825 CDS RS022_RS02825 NZ_CP114006.1 507107 508432 R Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(507107..508432) Candidatus Phytoplasma rubi RS022_RS02830 CDS RS022_RS02830 NZ_CP114006.1 508445 509938 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(508445..509938) Candidatus Phytoplasma rubi RS022_RS02835 CDS RS022_RS02835 NZ_CP114006.1 509957 510562 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(509957..510562) Candidatus Phytoplasma rubi RS022_RS02840 CDS RS022_RS02840 NZ_CP114006.1 510601 510750 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(510601..510750) Candidatus Phytoplasma rubi RS022_RS02845 CDS tmk NZ_CP114006.1 510734 511360 R Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase complement(510734..511360) Candidatus Phytoplasma rubi RS022_RS02850 CDS RS022_RS02850 NZ_CP114006.1 511397 511531 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein complement(511397..511531) Candidatus Phytoplasma rubi RS022_RS02855 CDS RS022_RS02855 NZ_CP114006.1 511495 511764 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2963 domain-containing protein complement(511495..511764) Candidatus Phytoplasma rubi RS022_RS02860 CDS RS022_RS02860 NZ_CP114006.1 511838 512479 R internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(511838..512479) Candidatus Phytoplasma rubi RS022_RS02865 CDS RS022_RS02865 NZ_CP114006.1 512485 512733 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(512485..512733) Candidatus Phytoplasma rubi RS022_RS02870 CDS RS022_RS02870 NZ_CP114006.1 512717 512935 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(512717..512935) Candidatus Phytoplasma rubi RS022_RS04180 CDS RS022_RS04180 NZ_CP114006.1 513296 513739 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(513296..513739) Candidatus Phytoplasma rubi RS022_RS02880 CDS RS022_RS02880 NZ_CP114006.1 514691 515152 R Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein complement(514691..515152) Candidatus Phytoplasma rubi RS022_RS02885 CDS RS022_RS02885 NZ_CP114006.1 515167 515964 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(515167..515964) Candidatus Phytoplasma rubi RS022_RS02890 CDS RS022_RS02890 NZ_CP114006.1 516067 517689 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA double-strand break repair protein Rad50 complement(516067..517689) Candidatus Phytoplasma rubi RS022_RS02895 CDS RS022_RS02895 NZ_CP114006.1 517692 518912 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein complement(517692..518912) Candidatus Phytoplasma rubi RS022_RS02900 CDS RS022_RS02900 NZ_CP114006.1 518971 519570 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(518971..519570) Candidatus Phytoplasma rubi RS022_RS02905 CDS RS022_RS02905 NZ_CP114006.1 519573 519842 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(519573..519842) Candidatus Phytoplasma rubi RS022_RS02910 CDS RS022_RS02910 NZ_CP114006.1 519873 520007 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(519873..520007) Candidatus Phytoplasma rubi RS022_RS02915 CDS RS022_RS02915 NZ_CP114006.1 520023 520286 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(520023..520286) Candidatus Phytoplasma rubi RS022_RS02920 CDS RS022_RS02920 NZ_CP114006.1 520397 520726 R Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein complement(520397..520726) Candidatus Phytoplasma rubi RS022_RS02925 CDS RS022_RS02925 NZ_CP114006.1 520965 521603 R Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(520965..521603) Candidatus Phytoplasma rubi RS022_RS02930 CDS RS022_RS02930 NZ_CP114006.1 521711 522190 D incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein <521711..522190 Candidatus Phytoplasma rubi RS022_RS02935 CDS RS022_RS02935 NZ_CP114006.1 522622 523554 D frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase 522622..523554 Candidatus Phytoplasma rubi RS022_RS02940 CDS RS022_RS02940 NZ_CP114006.1 523868 524050 D incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein <523868..524050 Candidatus Phytoplasma rubi RS022_RS02945 CDS RS022_RS02945 NZ_CP114006.1 524481 525418 D frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase 524481..525418 Candidatus Phytoplasma rubi RS022_RS02950 CDS RS022_RS02950 NZ_CP114006.1 527629 530298 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 527629..530298 Candidatus Phytoplasma rubi RS022_RS02955 CDS metG NZ_CP114006.1 531073 532638 R Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine--tRNA ligase complement(531073..532638) Candidatus Phytoplasma rubi RS022_RS02960 CDS rsmI NZ_CP114006.1 532660 533511 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase complement(532660..533511) Candidatus Phytoplasma rubi RS022_RS02965 CDS RS022_RS02965 NZ_CP114006.1 533524 534456 R Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(533524..534456) Candidatus Phytoplasma rubi RS022_RS02970 CDS tmk NZ_CP114006.1 534453 535073 R Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase complement(534453..535073) Candidatus Phytoplasma rubi RS022_RS02975 CDS truA NZ_CP114006.1 535087 535818 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine(38-40) synthase TruA complement(535087..535818) Candidatus Phytoplasma rubi RS022_RS02980 CDS RS022_RS02980 NZ_CP114006.1 535873 536853 R Derived by automated computational analysis using gene prediction method: Protein Homology.; energy-coupling factor transporter transmembrane component T complement(535873..536853) Candidatus Phytoplasma rubi RS022_RS02985 CDS RS022_RS02985 NZ_CP114006.1 536858 537706 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding cassette domain-containing protein complement(536858..537706) Candidatus Phytoplasma rubi RS022_RS02990 CDS RS022_RS02990 NZ_CP114006.1 537682 538503 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding cassette domain-containing protein complement(537682..538503) Candidatus Phytoplasma rubi RS022_RS02995 CDS rplQ NZ_CP114006.1 538559 538915 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L17 complement(538559..538915) Candidatus Phytoplasma rubi RS022_RS03000 CDS RS022_RS03000 NZ_CP114006.1 539084 540034 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit alpha complement(539084..540034) Candidatus Phytoplasma rubi RS022_RS03005 CDS rpsK NZ_CP114006.1 540071 540472 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S11 complement(540071..540472) Candidatus Phytoplasma rubi RS022_RS03010 CDS rpsM NZ_CP114006.1 540496 540858 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S13 complement(540496..540858) Candidatus Phytoplasma rubi RS022_RS03015 CDS rpmJ NZ_CP114006.1 540876 540992 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L36 complement(540876..540992) Candidatus Phytoplasma rubi RS022_RS03020 CDS RS022_RS03020 NZ_CP114006.1 540989 541234 R Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor IF-1 complement(540989..541234) Candidatus Phytoplasma rubi RS022_RS03025 CDS map NZ_CP114006.1 541305 542048 R Derived by automated computational analysis using gene prediction method: Protein Homology.; type I methionyl aminopeptidase complement(541305..542048) Candidatus Phytoplasma rubi RS022_RS03030 CDS secY NZ_CP114006.1 542108 543346 R Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecY complement(542108..543346) Candidatus Phytoplasma rubi RS022_RS03035 CDS rplO NZ_CP114006.1 543353 543793 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L15 complement(543353..543793) Candidatus Phytoplasma rubi RS022_RS03040 CDS rpmD NZ_CP114006.1 543795 543992 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L30 complement(543795..543992) Candidatus Phytoplasma rubi RS022_RS03045 CDS rpsE NZ_CP114006.1 543989 544498 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S5 complement(543989..544498) Candidatus Phytoplasma rubi RS022_RS03050 CDS rplR NZ_CP114006.1 544525 544878 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L18 complement(544525..544878) Candidatus Phytoplasma rubi RS022_RS03055 CDS rplF NZ_CP114006.1 544900 545442 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L6 complement(544900..545442) Candidatus Phytoplasma rubi RS022_RS03060 CDS rpsH NZ_CP114006.1 545462 545839 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S8 complement(545462..545839) Candidatus Phytoplasma rubi RS022_RS03065 CDS rpsN NZ_CP114006.1 545857 546126 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S14 complement(545857..546126) Candidatus Phytoplasma rubi RS022_RS03070 CDS rplE NZ_CP114006.1 546184 546726 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L5 complement(546184..546726) Candidatus Phytoplasma rubi RS022_RS03075 CDS rplX NZ_CP114006.1 546748 547092 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L24 complement(546748..547092) Candidatus Phytoplasma rubi RS022_RS03080 CDS rplN NZ_CP114006.1 547102 547482 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L14 complement(547102..547482) Candidatus Phytoplasma rubi RS022_RS03085 CDS rpsQ NZ_CP114006.1 547484 547753 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S17 complement(547484..547753) Candidatus Phytoplasma rubi RS022_RS03090 CDS rpmC NZ_CP114006.1 547872 548138 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L29 complement(547872..548138) Candidatus Phytoplasma rubi RS022_RS03095 CDS rplP NZ_CP114006.1 548135 548557 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L16 complement(548135..548557) Candidatus Phytoplasma rubi RS022_RS03100 CDS rpsC NZ_CP114006.1 548590 549342 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S3 complement(548590..549342) Candidatus Phytoplasma rubi RS022_RS03105 CDS rplV NZ_CP114006.1 549326 549700 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L22 complement(549326..549700) Candidatus Phytoplasma rubi RS022_RS03110 CDS rpsS NZ_CP114006.1 549719 550000 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S19 complement(549719..550000) Candidatus Phytoplasma rubi RS022_RS03115 CDS rplB NZ_CP114006.1 550020 550850 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L2 complement(550020..550850) Candidatus Phytoplasma rubi RS022_RS03120 CDS rplW NZ_CP114006.1 550889 551188 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L23 complement(550889..551188) Candidatus Phytoplasma rubi RS022_RS03125 CDS rplD NZ_CP114006.1 551181 551816 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L4 complement(551181..551816) Candidatus Phytoplasma rubi RS022_RS03130 CDS rplC NZ_CP114006.1 551809 552465 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L3 complement(551809..552465) Candidatus Phytoplasma rubi RS022_RS03135 CDS rpsJ NZ_CP114006.1 552519 552851 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S10 complement(552519..552851) Candidatus Phytoplasma rubi RS022_RS03140 CDS rsmH NZ_CP114006.1 553182 554108 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH complement(553182..554108) Candidatus Phytoplasma rubi RS022_RS03145 CDS rpoZ NZ_CP114006.1 554165 554380 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit omega complement(554165..554380) Candidatus Phytoplasma rubi RS022_RS03150 CDS gmk NZ_CP114006.1 554388 555020 R Derived by automated computational analysis using gene prediction method: Protein Homology.; guanylate kinase complement(554388..555020) Candidatus Phytoplasma rubi RS022_RS03155 CDS leuS NZ_CP114006.1 555056 557497 R Derived by automated computational analysis using gene prediction method: Protein Homology.; leucine--tRNA ligase complement(555056..557497) Candidatus Phytoplasma rubi RS022_RS03160 CDS acpP NZ_CP114006.1 557546 557776 R Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl carrier protein complement(557546..557776) Candidatus Phytoplasma rubi RS022_RS04185 CDS RS022_RS04185 NZ_CP114006.1 558113 558430 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(558113..558430) Candidatus Phytoplasma rubi RS022_RS04190 CDS RS022_RS04190 NZ_CP114006.1 558452 558598 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(558452..558598) Candidatus Phytoplasma rubi RS022_RS03170 CDS argS NZ_CP114006.1 558814 560505 R Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine--tRNA ligase complement(558814..560505) Candidatus Phytoplasma rubi RS022_RS03175 CDS RS022_RS03175 NZ_CP114006.1 560545 561444 R Derived by automated computational analysis using gene prediction method: Protein Homology.; RluA family pseudouridine synthase complement(560545..561444) Candidatus Phytoplasma rubi RS022_RS03180 CDS ftsH NZ_CP114006.1 561674 563620 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent zinc metalloprotease FtsH complement(561674..563620) Candidatus Phytoplasma rubi RS022_RS03185 CDS serS NZ_CP114006.1 563681 564955 R Derived by automated computational analysis using gene prediction method: Protein Homology.; serine--tRNA ligase complement(563681..564955) Candidatus Phytoplasma rubi RS022_RS03190 CDS rpsT NZ_CP114006.1 565031 565297 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S20 complement(565031..565297) Candidatus Phytoplasma rubi RS022_RS03195 CDS RS022_RS03195 NZ_CP114006.1 565557 565796 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(565557..565796) Candidatus Phytoplasma rubi RS022_RS03200 CDS RS022_RS03200 NZ_CP114006.1 567200 567829 D Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 567200..567829 Candidatus Phytoplasma rubi RS022_RS04195 CDS RS022_RS04195 NZ_CP114006.1 568436 568612 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 568436..568612 Candidatus Phytoplasma rubi RS022_RS03210 CDS RS022_RS03210 NZ_CP114006.1 569229 569645 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 569229..569645 Candidatus Phytoplasma rubi RS022_RS03215 CDS RS022_RS03215 NZ_CP114006.1 569737 569889 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 569737..569889 Candidatus Phytoplasma rubi RS022_RS03220 CDS RS022_RS03220 NZ_CP114006.1 570127 570312 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 570127..570312 Candidatus Phytoplasma rubi RS022_RS03225 CDS RS022_RS03225 NZ_CP114006.1 570326 570625 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 570326..570625 Candidatus Phytoplasma rubi RS022_RS03230 CDS RS022_RS03230 NZ_CP114006.1 570625 570963 D Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them.; Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.; SVM family protein 570625..570963 Candidatus Phytoplasma rubi RS022_RS03235 CDS RS022_RS03235 NZ_CP114006.1 571210 571383 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(571210..571383) Candidatus Phytoplasma rubi RS022_RS03240 CDS tuf NZ_CP114006.1 573351 574514 R Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor Tu complement(573351..574514) Candidatus Phytoplasma rubi RS022_RS03245 CDS fusA NZ_CP114006.1 574584 576653 R Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor G complement(574584..576653) Candidatus Phytoplasma rubi RS022_RS03250 CDS rpsG NZ_CP114006.1 576685 577155 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S7 complement(576685..577155) Candidatus Phytoplasma rubi RS022_RS03255 CDS rpsL NZ_CP114006.1 577201 577620 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S12 complement(577201..577620) Candidatus Phytoplasma rubi RS022_RS03260 CDS rpoC NZ_CP114006.1 577772 581845 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit beta' complement(577772..581845) Candidatus Phytoplasma rubi RS022_RS03265 CDS RS022_RS03265 NZ_CP114006.1 581862 585593 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit beta complement(581862..585593) Candidatus Phytoplasma rubi RS022_RS03270 CDS rplL NZ_CP114006.1 585743 586126 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L7/L12 complement(585743..586126) Candidatus Phytoplasma rubi RS022_RS03275 CDS rplJ NZ_CP114006.1 586174 586662 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L10 complement(586174..586662) Candidatus Phytoplasma rubi RS022_RS03280 CDS rplA NZ_CP114006.1 586751 587437 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L1 complement(586751..587437) Candidatus Phytoplasma rubi RS022_RS03285 CDS rplK NZ_CP114006.1 587490 587915 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L11 complement(587490..587915) Candidatus Phytoplasma rubi RS022_RS03290 CDS RS022_RS03290 NZ_CP114006.1 588094 588708 R Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription termination/antitermination NusG family protein complement(588094..588708) Candidatus Phytoplasma rubi RS022_RS03295 CDS RS022_RS03295 NZ_CP114006.1 588734 589123 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(588734..589123) Candidatus Phytoplasma rubi RS022_RS03300 CDS rpmG NZ_CP114006.1 589150 589290 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L33 complement(589150..589290) Candidatus Phytoplasma rubi RS022_RS03305 CDS rlmB NZ_CP114006.1 589389 590105 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB complement(589389..590105) Candidatus Phytoplasma rubi RS022_RS03310 CDS RS022_RS03310 NZ_CP114006.1 590144 592444 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HAD-IC family P-type ATPase complement(590144..592444) Candidatus Phytoplasma rubi RS022_RS03315 CDS cysS NZ_CP114006.1 592511 593827 R Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine--tRNA ligase complement(592511..593827) Candidatus Phytoplasma rubi RS022_RS03320 CDS gltX NZ_CP114006.1 593856 595190 R Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate--tRNA ligase complement(593856..595190) Candidatus Phytoplasma rubi RS022_RS03325 CDS rpsI NZ_CP114006.1 595320 595712 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S9 complement(595320..595712) Candidatus Phytoplasma rubi RS022_RS03330 CDS rplM NZ_CP114006.1 595719 596189 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L13 complement(595719..596189) Candidatus Phytoplasma rubi RS022_RS03355 CDS RS022_RS03355 NZ_CP114006.1 597478 597783 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(597478..597783) Candidatus Phytoplasma rubi RS022_RS03360 CDS RS022_RS03360 NZ_CP114006.1 598546 599619 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DUF2130 domain-containing protein complement(598546..599619) Candidatus Phytoplasma rubi RS022_RS03365 CDS glnS NZ_CP114006.1 599641 601254 R Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine--tRNA ligase complement(599641..601254) Candidatus Phytoplasma rubi RS022_RS03370 CDS tsaD NZ_CP114006.1 601320 602315 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD complement(601320..602315) Candidatus Phytoplasma rubi RS022_RS03375 CDS tsaB NZ_CP114006.1 602380 602943 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB complement(602380..602943) Candidatus Phytoplasma rubi RS022_RS03380 CDS tsaE NZ_CP114006.1 602983 603492 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE complement(602983..603492) Candidatus Phytoplasma rubi RS022_RS03385 CDS gyrA NZ_CP114006.1 603603 606122 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase subunit A complement(603603..606122) Candidatus Phytoplasma rubi RS022_RS03390 CDS gyrB NZ_CP114006.1 606152 608065 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase (ATP-hydrolyzing) subunit B complement(606152..608065) Candidatus Phytoplasma rubi RS022_RS03395 CDS RS022_RS03395 NZ_CP114006.1 608887 611832 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(608887..611832) Candidatus Phytoplasma rubi RS022_RS03400 CDS RS022_RS03400 NZ_CP114006.1 612201 612995 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HAD-IIB family hydrolase complement(612201..612995) Candidatus Phytoplasma rubi RS022_RS03405 CDS fba NZ_CP114006.1 613033 613899 R Derived by automated computational analysis using gene prediction method: Protein Homology.; class II fructose-1,6-bisphosphate aldolase complement(613033..613899) Candidatus Phytoplasma rubi RS022_RS03410 CDS gap NZ_CP114006.1 613987 614994 R Derived by automated computational analysis using gene prediction method: Protein Homology.; type I glyceraldehyde-3-phosphate dehydrogenase complement(613987..614994) Candidatus Phytoplasma rubi RS022_RS03415 CDS RS022_RS03415 NZ_CP114006.1 615017 616225 R Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycerate kinase complement(615017..616225) Candidatus Phytoplasma rubi RS022_RS03420 CDS RS022_RS03420 NZ_CP114006.1 616295 617266 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent 6-phosphofructokinase complement(616295..617266) Candidatus Phytoplasma rubi RS022_RS03425 CDS gpmI NZ_CP114006.1 617527 619053 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(617527..619053) Candidatus Phytoplasma rubi RS022_RS03430 CDS eno NZ_CP114006.1 619092 620384 R Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphopyruvate hydratase complement(619092..620384) Candidatus Phytoplasma rubi RS022_RS03435 CDS smpB NZ_CP114006.1 621088 621537 R Derived by automated computational analysis using gene prediction method: Protein Homology.; SsrA-binding protein SmpB complement(621088..621537) Candidatus Phytoplasma rubi RS022_RS03440 CDS RS022_RS03440 NZ_CP114006.1 621647 622174 R Derived by automated computational analysis using gene prediction method: Protein Homology.; inorganic diphosphatase complement(621647..622174) Candidatus Phytoplasma rubi RS022_RS03445 CDS RS022_RS03445 NZ_CP114006.1 622269 623603 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(622269..623603) Candidatus Phytoplasma rubi RS022_RS03530 CDS RS022_RS03530 NZ_CP114006.1 630490 631869 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; lipoprotein 17-related variable surface protein complement(630490..631869) Candidatus Phytoplasma rubi RS022_RS03535 CDS RS022_RS03535 NZ_CP114006.1 632294 632641 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(632294..632641) Candidatus Phytoplasma rubi RS022_RS03540 CDS RS022_RS03540 NZ_CP114006.1 633453 635432 R Derived by automated computational analysis using gene prediction method: Protein Homology.; heavy metal translocating P-type ATPase complement(633453..635432) Candidatus Phytoplasma rubi RS022_RS03545 CDS RS022_RS03545 NZ_CP114006.1 635565 635840 R Derived by automated computational analysis using gene prediction method: Protein Homology.; SpoVG family protein complement(635565..635840) Candidatus Phytoplasma rubi RS022_RS03550 CDS spoVG NZ_CP114006.1 635835 636146 R incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; septation regulator SpoVG complement(<635835..636146) Candidatus Phytoplasma rubi RS022_RS03555 CDS rsmA NZ_CP114006.1 636302 637120 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA complement(636302..637120) Candidatus Phytoplasma rubi RS022_RS03560 CDS RS022_RS03560 NZ_CP114006.1 637117 638424 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HD domain-containing protein complement(637117..638424) Candidatus Phytoplasma rubi RS022_RS03565 CDS pduL NZ_CP114006.1 638584 639165 R Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate propanoyltransferase complement(638584..639165) Candidatus Phytoplasma rubi RS022_RS03570 CDS RS022_RS03570 NZ_CP114006.1 639336 641024 R Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase complement(639336..641024) Candidatus Phytoplasma rubi RS022_RS03575 CDS RS022_RS03575 NZ_CP114006.1 641188 642039 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 5'-3' exonuclease H3TH domain-containing protein complement(641188..642039) Candidatus Phytoplasma rubi RS022_RS03580 CDS ffh NZ_CP114006.1 642087 643436 R Derived by automated computational analysis using gene prediction method: Protein Homology.; signal recognition particle protein complement(642087..643436) Candidatus Phytoplasma rubi RS022_RS03585 CDS ftsY NZ_CP114006.1 643481 644437 R Derived by automated computational analysis using gene prediction method: Protein Homology.; signal recognition particle-docking protein FtsY complement(643481..644437) Candidatus Phytoplasma rubi RS022_RS03590 CDS RS022_RS03590 NZ_CP114006.1 644529 644849 R Derived by automated computational analysis using gene prediction method: Protein Homology.; topoisomerase DNA-binding C4 zinc finger domain-containing protein complement(644529..644849) Candidatus Phytoplasma rubi RS022_RS03595 CDS RS022_RS03595 NZ_CP114006.1 645006 645281 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase complement(645006..645281) Candidatus Phytoplasma rubi RS022_RS04110 CDS RS022_RS04110 NZ_CP114006.1 645296 645850 R internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase complement(645296..645850) Candidatus Phytoplasma rubi RS022_RS03605 CDS RS022_RS03605 NZ_CP114006.1 645852 646193 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase complement(645852..646193) Candidatus Phytoplasma rubi RS022_RS03610 CDS RS022_RS03610 NZ_CP114006.1 646287 646487 R Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(646287..646487) Candidatus Phytoplasma rubi RS022_RS03615 CDS ylqF NZ_CP114006.1 646543 647394 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome biogenesis GTPase YlqF complement(646543..647394) Candidatus Phytoplasma rubi RS022_RS03620 CDS RS022_RS03620 NZ_CP114006.1 647428 648165 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(647428..648165) Candidatus Phytoplasma rubi RS022_RS03625 CDS tilS NZ_CP114006.1 648256 649524 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA lysidine(34) synthetase TilS complement(648256..649524) Candidatus Phytoplasma rubi RS022_RS03630 CDS aspS NZ_CP114006.1 649567 651312 R Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate--tRNA ligase complement(649567..651312) Candidatus Phytoplasma rubi RS022_RS03635 CDS hisS NZ_CP114006.1 651314 652579 R Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine--tRNA ligase complement(651314..652579) Candidatus Phytoplasma rubi RS022_RS03640 CDS RS022_RS03640 NZ_CP114006.1 652689 654419 R Derived by automated computational analysis using gene prediction method: Protein Homology.; RelA/SpoT family protein complement(652689..654419) Candidatus Phytoplasma rubi RS022_RS03645 CDS mnmA NZ_CP114006.1 654481 655629 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA 2-thiouridine(34) synthase MnmA complement(654481..655629) Candidatus Phytoplasma rubi RS022_RS03650 CDS RS022_RS03650 NZ_CP114006.1 655667 657430 R Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrilase-related carbon-nitrogen hydrolase complement(655667..657430) Candidatus Phytoplasma rubi RS022_RS03655 CDS RS022_RS03655 NZ_CP114006.1 657594 658340 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YitT family protein complement(657594..658340) Candidatus Phytoplasma rubi RS022_RS03660 CDS prfB NZ_CP114006.1 658431 659516 R Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide chain release factor 2 complement(658431..659516) Candidatus Phytoplasma rubi RS022_RS03665 CDS secA NZ_CP114006.1 659549 662062 R Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecA complement(659549..662062) Candidatus Phytoplasma rubi RS022_RS03670 CDS RS022_RS03670 NZ_CP114006.1 662452 663795 R Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-dependent oxidoreductase complement(662452..663795) Candidatus Phytoplasma rubi RS022_RS03675 CDS RS022_RS03675 NZ_CP114006.1 663926 668485 R Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease domain-containing protein complement(663926..668485) Candidatus Phytoplasma rubi RS022_RS03680 CDS RS022_RS03680 NZ_CP114006.1 669018 669716 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 669018..669716 Candidatus Phytoplasma rubi RS022_RS03685 CDS nusA NZ_CP114006.1 670110 671168 D Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription termination factor NusA 670110..671168 Candidatus Phytoplasma rubi RS022_RS03690 CDS infB NZ_CP114006.1 671295 673103 D Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor IF-2 671295..673103 Candidatus Phytoplasma rubi RS022_RS03695 CDS rbfA NZ_CP114006.1 673106 673453 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosome-binding factor RbfA 673106..673453 Candidatus Phytoplasma rubi RS022_RS03700 CDS priA NZ_CP114006.1 673557 675713 D Derived by automated computational analysis using gene prediction method: Protein Homology.; primosomal protein N' 673557..675713 Candidatus Phytoplasma rubi RS022_RS03705 CDS RS022_RS03705 NZ_CP114006.1 676174 677613 D Derived by automated computational analysis using gene prediction method: Protein Homology.; MATE family efflux transporter 676174..677613 Candidatus Phytoplasma rubi RS022_RS03710 CDS RS022_RS03710 NZ_CP114006.1 677638 678915 D Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-6-phosphate isomerase 677638..678915 Candidatus Phytoplasma rubi RS022_RS03715 CDS RS022_RS03715 NZ_CP114006.1 679123 679908 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 679123..679908 Candidatus Phytoplasma rubi RS022_RS03720 CDS RS022_RS03720 NZ_CP114006.1 680340 680838 D frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor 680340..>680838 Candidatus Phytoplasma rubi RS022_RS03725 CDS RS022_RS03725 NZ_CP114006.1 681304 681474 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 681304..681474 Candidatus Phytoplasma rubi RS022_RS03730 CDS RS022_RS03730 NZ_CP114006.1 681512 682018 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 681512..682018 Candidatus Phytoplasma rubi RS022_RS03735 CDS RS022_RS03735 NZ_CP114006.1 682151 682717 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 682151..682717 Candidatus Phytoplasma rubi RS022_RS03740 CDS RS022_RS03740 NZ_CP114006.1 682916 683548 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 682916..683548 Candidatus Phytoplasma rubi RS022_RS03745 CDS RS022_RS03745 NZ_CP114006.1 683648 685018 D Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase 683648..685018 Candidatus Phytoplasma rubi RS022_RS03750 CDS RS022_RS03750 NZ_CP114006.1 685128 686801 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 685128..686801 Candidatus Phytoplasma rubi RS022_RS03755 CDS RS022_RS03755 NZ_CP114006.1 686890 687771 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 686890..687771 Candidatus Phytoplasma rubi RS022_RS03760 CDS RS022_RS03760 NZ_CP114006.1 687874 688644 R Derived by automated computational analysis using gene prediction method: Protein Homology.; IS3 family transposase complement(687874..688644) Candidatus Phytoplasma rubi RS022_RS03765 CDS RS022_RS03765 NZ_CP114006.1 688584 688835 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(688584..688835) Candidatus Phytoplasma rubi RS022_RS03770 CDS infC NZ_CP114006.1 689352 689996 D Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor IF-3 689352..689996 Candidatus Phytoplasma rubi RS022_RS03775 CDS rpmI NZ_CP114006.1 690052 690240 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L35 690052..690240 Candidatus Phytoplasma rubi RS022_RS03780 CDS rplT NZ_CP114006.1 690275 690862 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L20 690275..690862 Candidatus Phytoplasma rubi RS022_RS03790 CDS RS022_RS03790 NZ_CP114006.1 690890 691507 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 690890..691507 Candidatus Phytoplasma rubi RS022_RS03795 CDS RS022_RS03795 NZ_CP114006.1 691540 691812 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 691540..691812 Candidatus Phytoplasma rubi RS022_RS03800 CDS RS022_RS03800 NZ_CP114006.1 691805 692314 D Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 691805..692314 Candidatus Phytoplasma rubi RS022_RS03805 CDS RS022_RS03805 NZ_CP114006.1 692347 692607 D incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M28 <692347..692607 Candidatus Phytoplasma rubi RS022_RS03810 CDS rpmH NZ_CP114006.1 692706 692840 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L34 692706..692840 Candidatus Phytoplasma rubi RS022_RS03815 CDS rnpA NZ_CP114006.1 693122 693457 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease P protein component 693122..693457 Candidatus Phytoplasma rubi RS022_RS03820 CDS RS022_RS03820 NZ_CP114006.1 693479 695077 D Derived by automated computational analysis using gene prediction method: Protein Homology.; YidC/Oxa1 family membrane protein insertase 693479..695077 Candidatus Phytoplasma rubi RS022_RS03825 CDS RS022_RS03825 NZ_CP114006.1 695278 695691 D Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-hydroxycarboxylate transporter family protein 695278..695691 Candidatus Phytoplasma rubi RS022_RS03830 CDS RS022_RS03830 NZ_CP114006.1 696695 698467 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein complement(696695..698467) Candidatus Phytoplasma rubi RS022_RS03835 CDS RS022_RS03835 NZ_CP114006.1 698469 700187 R Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein complement(698469..700187) Candidatus Phytoplasma rubi RS022_RS03840 CDS groL NZ_CP114006.1 700417 702033 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperonin GroEL complement(700417..702033) Candidatus Phytoplasma rubi RS022_RS03845 CDS RS022_RS03845 NZ_CP114006.1 702101 702376 R Derived by automated computational analysis using gene prediction method: Protein Homology.; co-chaperone GroES complement(702101..702376) Candidatus Phytoplasma rubi RS022_RS03850 CDS RS022_RS03850 NZ_CP114006.1 702979 704421 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein 702979..704421 Candidatus Phytoplasma rubi RS022_RS03855 CDS RS022_RS03855 NZ_CP114006.1 705028 705675 D Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylate kinase 705028..705675 Candidatus Phytoplasma rubi RS022_RS03860 CDS RS022_RS03860 NZ_CP114006.1 705895 710535 D Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase 705895..710535 Candidatus Phytoplasma rubi RS022_RS03865 CDS RS022_RS03865 NZ_CP114006.1 711776 712078 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 711776..712078 Candidatus Phytoplasma rubi RS022_RS03870 CDS RS022_RS03870 NZ_CP114006.1 712419 713648 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DEAD/DEAH box helicase 712419..713648 Candidatus Phytoplasma rubi RS022_RS03875 CDS plsX NZ_CP114006.1 713679 714698 D Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate acyltransferase PlsX 713679..714698 Candidatus Phytoplasma rubi RS022_RS03880 CDS rnc NZ_CP114006.1 714712 715398 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease III 714712..715398 Candidatus Phytoplasma rubi RS022_RS03885 CDS RS022_RS03885 NZ_CP114006.1 715391 716005 D Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaD domain protein 715391..716005 Candidatus Phytoplasma rubi RS022_RS03890 CDS RS022_RS03890 NZ_CP114006.1 716149 716607 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 716149..716607 Candidatus Phytoplasma rubi RS022_RS03895 CDS RS022_RS03895 NZ_CP114006.1 716685 718313 R Derived by automated computational analysis using gene prediction method: Protein Homology.; CTP synthase complement(716685..718313) Candidatus Phytoplasma rubi RS022_RS03900 CDS RS022_RS03900 NZ_CP114006.1 718365 719189 R Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylserine decarboxylase complement(718365..719189) Candidatus Phytoplasma rubi RS022_RS03905 CDS RS022_RS03905 NZ_CP114006.1 719281 719973 R Derived by automated computational analysis using gene prediction method: Protein Homology.; CDP-alcohol phosphatidyltransferase family protein complement(719281..719973) Candidatus Phytoplasma rubi RS022_RS03910 CDS rpoE NZ_CP114006.1 720073 720612 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit delta complement(720073..720612) Candidatus Phytoplasma rubi RS022_RS03915 CDS RS022_RS03915 NZ_CP114006.1 720661 720972 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YbaB/EbfC family nucleoid-associated protein complement(720661..720972) Candidatus Phytoplasma rubi RS022_RS03920 CDS dnaX NZ_CP114006.1 720965 722695 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit gamma/tau complement(720965..722695) Candidatus Phytoplasma rubi RS022_RS03925 CDS RS022_RS03925 NZ_CP114006.1 722858 724189 R Derived by automated computational analysis using gene prediction method: Protein Homology.; metallopeptidase TldD-related protein complement(722858..724189) Candidatus Phytoplasma rubi RS022_RS03930 CDS RS022_RS03930 NZ_CP114006.1 724182 725570 R Derived by automated computational analysis using gene prediction method: Protein Homology.; TldD/PmbA family protein complement(724182..725570) Candidatus Phytoplasma rubi RS022_RS03935 CDS RS022_RS03935 NZ_CP114006.1 725683 727344 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DEAD/DEAH box helicase complement(725683..727344) Candidatus Phytoplasma rubi RS022_RS03940 CDS RS022_RS03940 NZ_CP114006.1 728512 729843 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; toprim domain-containing protein complement(728512..729843) Candidatus Phytoplasma rubi RS022_RS03945 CDS RS022_RS03945 NZ_CP114006.1 729856 731310 R internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaB-like helicase C-terminal domain-containing protein complement(729856..731310) Candidatus Phytoplasma rubi RS022_RS03950 CDS RS022_RS03950 NZ_CP114006.1 731378 731983 R internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein complement(731378..731983) Candidatus Phytoplasma rubi RS022_RS03955 CDS RS022_RS03955 NZ_CP114006.1 732321 732773 R Derived by automated computational analysis using gene prediction method: Protein Homology.; dTMP kinase complement(732321..732773) Candidatus Phytoplasma rubi RS022_RS03960 CDS RS022_RS03960 NZ_CP114006.1 732849 733490 R Derived by automated computational analysis using gene prediction method: Protein Homology.; YqaJ viral recombinase family protein complement(732849..733490) Candidatus Phytoplasma rubi RS022_RS03965 CDS RS022_RS03965 NZ_CP114006.1 733644 734357 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(733644..734357) Candidatus Phytoplasma rubi RS022_RS03970 CDS RS022_RS03970 NZ_CP114006.1 734651 735526 R Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyribonuclease IV complement(734651..735526) Candidatus Phytoplasma rubi RS022_RS03975 CDS RS022_RS03975 NZ_CP114006.1 735519 736814 R Derived by automated computational analysis using gene prediction method: Protein Homology.; DEAD/DEAH box helicase complement(735519..736814) Candidatus Phytoplasma rubi RS022_RS03980 CDS RS022_RS03980 NZ_CP114006.1 736997 737215 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 736997..737215 Candidatus Phytoplasma rubi RS022_RS03985 CDS RS022_RS03985 NZ_CP114006.1 737297 737935 R Derived by automated computational analysis using gene prediction method: Protein Homology.; superoxide dismutase complement(737297..737935) Candidatus Phytoplasma rubi RS022_RS03990 CDS RS022_RS03990 NZ_CP114006.1 738074 738787 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(738074..738787) Candidatus Phytoplasma rubi RS022_RS03995 CDS RS022_RS03995 NZ_CP114006.1 739382 740461 D Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc ABC transporter substrate-binding protein 739382..740461 Candidatus Phytoplasma rubi RS022_RS04000 CDS RS022_RS04000 NZ_CP114006.1 740458 741195 D Derived by automated computational analysis using gene prediction method: Protein Homology.; metal ABC transporter ATP-binding protein 740458..741195 Candidatus Phytoplasma rubi RS022_RS04005 CDS RS022_RS04005 NZ_CP114006.1 741238 741375 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 741238..741375 Candidatus Phytoplasma rubi RS022_RS04010 CDS RS022_RS04010 NZ_CP114006.1 741411 742310 D Derived by automated computational analysis using gene prediction method: Protein Homology.; metal ABC transporter permease 741411..742310 Candidatus Phytoplasma rubi RS022_RS04015 CDS RS022_RS04015 NZ_CP114006.1 742313 743419 D Derived by automated computational analysis using gene prediction method: Protein Homology.; metal ABC transporter permease 742313..743419 Candidatus Phytoplasma rubi RS022_RS04020 CDS RS022_RS04020 NZ_CP114006.1 743828 744211 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 743828..744211 Candidatus Phytoplasma rubi RS022_RS04025 CDS RS022_RS04025 NZ_CP114006.1 744342 744497 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 744342..744497 Candidatus Phytoplasma rubi RS022_RS04030 CDS RS022_RS04030 NZ_CP114006.1 745204 745483 R frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; phase variable surface lipoprotein complement(745204..>745483) Candidatus Phytoplasma rubi RS022_RS04035 CDS RS022_RS04035 NZ_CP114006.1 745467 747185 R frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.; AAA family ATPase complement(745467..747185) Candidatus Phytoplasma rubi RS022_RS04040 CDS RS022_RS04040 NZ_CP114006.1 747218 747358 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(747218..747358) Candidatus Phytoplasma rubi RS022_RS04045 CDS RS022_RS04045 NZ_CP114006.1 747374 747664 R Derived by automated computational analysis using gene prediction method: Protein Homology.; HU family DNA-binding protein complement(747374..747664) Candidatus Phytoplasma rubi RS022_RS04050 CDS RS022_RS04050 NZ_CP114006.1 748183 748763 R frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; sigma-70 family RNA polymerase sigma factor complement(<748183..748763) Candidatus Phytoplasma rubi RS022_RS04055 CDS RS022_RS04055 NZ_CP114006.1 749559 750725 D Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein 749559..750725 Candidatus Phytoplasma rubi RS022_RS04060 CDS RS022_RS04060 NZ_CP114006.1 751190 751528 D Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter substrate-binding protein 751190..751528 Candidatus Phytoplasma rubi RS022_RS04065 CDS rsmG NZ_CP114006.1 752557 753195 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG complement(752557..753195) Candidatus Phytoplasma rubi RS022_RS04070 CDS mnmG NZ_CP114006.1 753161 755014 R Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG complement(753161..755014) Candidatus Phytoplasma rubi RS022_RS04075 CDS RS022_RS04075 NZ_CP114006.1 755072 755716 R Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.; hypothetical protein complement(755072..755716) Candidatus Phytoplasma rubi RS022_RS04085 CDS RS022_RS04085 NZ_CP114006.1 755881 756345 R Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside deaminase complement(755881..756345) Candidatus Phytoplasma rubi RS022_RS04090 CDS RS022_RS04090 NZ_CP114006.1 756367 756942 R Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidine kinase complement(756367..756942) Candidatus Phytoplasma rubi RS022_RS04095 CDS rpmE NZ_CP114006.1 757003 757206 R Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L31 complement(757003..757206) Candidatus Phytoplasma rubi RS022_RS04100 CDS glyA NZ_CP114006.1 757391 758650 R Derived by automated computational analysis using gene prediction method: Protein Homology.; serine hydroxymethyltransferase complement(757391..758650) Candidatus Phytoplasma rubi RS022_RS04105 CDS nrdE NZ_CP114006.1 759718 762195 D Derived by automated computational analysis using gene prediction method: Protein Homology.; class 1b ribonucleoside-diphosphate reductase subunit alpha 759718..762195 Candidatus Phytoplasma rubi RS022_RS00585 tRNA RS022_RS00585 NZ_CP114006.1 114912 114988 R tRNA-Arg complement(114912..114988) Candidatus Phytoplasma rubi RS022_RS01115 tRNA RS022_RS01115 NZ_CP114006.1 206277 206353 D tRNA-Ile 206277..206353 Candidatus Phytoplasma rubi RS022_RS01130 tRNA RS022_RS01130 NZ_CP114006.1 209459 209534 D tRNA-Val 209459..209534 Candidatus Phytoplasma rubi RS022_RS01135 tRNA RS022_RS01135 NZ_CP114006.1 209550 209625 D tRNA-Asn 209550..209625 Candidatus Phytoplasma rubi RS022_RS01235 tRNA RS022_RS01235 NZ_CP114006.1 234228 234312 D tRNA-Leu 234228..234312 Candidatus Phytoplasma rubi RS022_RS01290 tRNA RS022_RS01290 NZ_CP114006.1 243926 244000 R tRNA-Gly complement(243926..244000) Candidatus Phytoplasma rubi RS022_RS01295 tRNA RS022_RS01295 NZ_CP114006.1 244072 244145 R tRNA-Thr complement(244072..244145) Candidatus Phytoplasma rubi RS022_RS01340 tRNA RS022_RS01340 NZ_CP114006.1 251977 252050 D tRNA-Cys 251977..252050 Candidatus Phytoplasma rubi RS022_RS01735 tRNA RS022_RS01735 NZ_CP114006.1 325251 325335 D tRNA-Leu 325251..325335 Candidatus Phytoplasma rubi RS022_RS01740 tRNA RS022_RS01740 NZ_CP114006.1 325749 325841 R tRNA-Ser complement(325749..325841) Candidatus Phytoplasma rubi RS022_RS01780 tRNA RS022_RS01780 NZ_CP114006.1 337624 337712 D tRNA-Ser 337624..337712 Candidatus Phytoplasma rubi RS022_RS02770 tRNA RS022_RS02770 NZ_CP114006.1 498339 498414 D tRNA-His 498339..498414 Candidatus Phytoplasma rubi RS022_RS02775 tRNA RS022_RS02775 NZ_CP114006.1 498461 498535 D tRNA-Gln 498461..498535 Candidatus Phytoplasma rubi RS022_RS02780 tRNA RS022_RS02780 NZ_CP114006.1 498570 498652 D tRNA-Leu 498570..498652 Candidatus Phytoplasma rubi RS022_RS02785 tRNA RS022_RS02785 NZ_CP114006.1 498669 498743 D tRNA-Trp 498669..498743 Candidatus Phytoplasma rubi RS022_RS03335 tRNA RS022_RS03335 NZ_CP114006.1 596507 596581 R tRNA-Gly complement(596507..596581) Candidatus Phytoplasma rubi RS022_RS03340 tRNA RS022_RS03340 NZ_CP114006.1 596595 596671 R tRNA-Pro complement(596595..596671) Candidatus Phytoplasma rubi RS022_RS03345 tRNA RS022_RS03345 NZ_CP114006.1 596705 596781 R tRNA-Arg complement(596705..596781) Candidatus Phytoplasma rubi RS022_RS03350 tRNA RS022_RS03350 NZ_CP114006.1 596802 596877 R tRNA-Glu complement(596802..596877) Candidatus Phytoplasma rubi RS022_RS03450 tRNA RS022_RS03450 NZ_CP114006.1 623750 623825 R tRNA-Phe complement(623750..623825) Candidatus Phytoplasma rubi RS022_RS03455 tRNA RS022_RS03455 NZ_CP114006.1 623833 623908 R tRNA-Asp complement(623833..623908) Candidatus Phytoplasma rubi RS022_RS03460 tRNA RS022_RS03460 NZ_CP114006.1 623925 624001 R tRNA-Met complement(623925..624001) Candidatus Phytoplasma rubi RS022_RS03465 tRNA RS022_RS03465 NZ_CP114006.1 624052 624140 R tRNA-Ser complement(624052..624140) Candidatus Phytoplasma rubi RS022_RS03470 tRNA RS022_RS03470 NZ_CP114006.1 624158 624235 R tRNA-Ile complement(624158..624235) Candidatus Phytoplasma rubi RS022_RS03475 tRNA RS022_RS03475 NZ_CP114006.1 624239 624315 R tRNA-Met complement(624239..624315) Candidatus Phytoplasma rubi RS022_RS03480 tRNA RS022_RS03480 NZ_CP114006.1 624384 624459 R tRNA-Ala complement(624384..624459) Candidatus Phytoplasma rubi RS022_RS03485 tRNA RS022_RS03485 NZ_CP114006.1 624468 624553 R tRNA-Leu complement(624468..624553) Candidatus Phytoplasma rubi RS022_RS03490 tRNA RS022_RS03490 NZ_CP114006.1 624593 624668 R tRNA-Lys complement(624593..624668) Candidatus Phytoplasma rubi RS022_RS03495 tRNA RS022_RS03495 NZ_CP114006.1 624679 624754 R tRNA-Thr complement(624679..624754) Candidatus Phytoplasma rubi RS022_RS03500 tRNA RS022_RS03500 NZ_CP114006.1 624770 624845 R tRNA-Val complement(624770..624845) Candidatus Phytoplasma rubi RS022_RS03515 tRNA RS022_RS03515 NZ_CP114006.1 627951 628027 R tRNA-Ile complement(627951..628027) Candidatus Phytoplasma rubi RS022_RS03525 tRNA RS022_RS03525 NZ_CP114006.1 629795 629878 R tRNA-Tyr complement(629795..629878) Candidatus Phytoplasma rubi RS022_RS01110 rRNA RS022_RS01110 NZ_CP114006.1 204634 206168 D 16S ribosomal RNA 204634..206168 Candidatus Phytoplasma rubi RS022_RS01120 rRNA RS022_RS01120 NZ_CP114006.1 206433 209292 D 23S ribosomal RNA 206433..209292 Candidatus Phytoplasma rubi RS022_RS01125 rRNA rrf NZ_CP114006.1 209336 209450 D 5S ribosomal RNA 209336..209450 Candidatus Phytoplasma rubi RS022_RS03505 rRNA rrf NZ_CP114006.1 624854 624968 R 5S ribosomal RNA complement(624854..624968) Candidatus Phytoplasma rubi RS022_RS03510 rRNA RS022_RS03510 NZ_CP114006.1 625012 627871 R 23S ribosomal RNA complement(625012..627871) Candidatus Phytoplasma rubi RS022_RS03520 rRNA RS022_RS03520 NZ_CP114006.1 628136 629671 R 16S ribosomal RNA complement(628136..629671) Candidatus Phytoplasma rubi