-- dump date 20140619_024157 -- class Genbank::CDS -- table cds_note -- id note YP_006529726.1 COG0593 ATPase involved in DNA replication initiation YP_006529727.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_006529729.1 COG1420 Transcriptional regulator of heat shock gene YP_006529730.1 COG1131 ABC-type multidrug transport system, ATPase component YP_006529731.1 COG0009 Putative translation factor (SUA5) YP_006529734.1 COG0250 Transcription antiterminator YP_006529735.1 COG2190 Phosphotransferase system IIA components YP_006529736.1 COG0442 Prolyl-tRNA synthetase YP_006529737.1 COG0166 Glucose-6-phosphate isomerase YP_006529738.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_006529739.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_006529740.1 COG0162 Tyrosyl-tRNA synthetase YP_006529741.1 COG0541 Signal recognition particle GTPase YP_006529742.1 COG0360 Ribosomal protein S6 YP_006529743.1 COG0629 Single-stranded DNA-binding protein YP_006529744.1 COG0238 Ribosomal protein S18 YP_006529745.1 COG0305 Replicative DNA helicase YP_006529746.1 COG1284 Uncharacterized conserved protein YP_006529747.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_006529748.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_006529749.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_006529753.1 COG0180 Tryptophanyl-tRNA synthetase YP_006529754.1 COG0012 Predicted GTPase, probable translation factor YP_006529755.1 COG1435 Thymidine kinase YP_006529757.1 COG0481 Membrane GTPase LepA YP_006529762.1 COG0149 Triosephosphate isomerase YP_006529763.1 COG0696 Phosphoglyceromutase YP_006529764.1 COG0813 Purine-nucleoside phosphorylase YP_006529768.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_006529769.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_006529770.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_006529771.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_006529772.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_006529773.1 COG0192 S-adenosylmethionine synthetase YP_006529774.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_006529775.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_006529776.1 COG0704 Phosphate uptake regulator YP_006529778.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_006529779.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_006529780.1 COG1418 Predicted HD superfamily hydrolase YP_006529781.1 COG1418 Predicted HD superfamily hydrolase YP_006529782.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_006529784.1 COG0561 Predicted hydrolases of the HAD superfamily YP_006529785.1 COG0618 Exopolyphosphatase-related proteins YP_006529787.1 COG0554 Glycerol kinase YP_006529788.1 COG0050 GTPases - translation elongation factors YP_006529789.1 COG0104 Adenylosuccinate synthase YP_006529791.1 COG0211 Ribosomal protein L27 YP_006529792.1 COG0080 Ribosomal protein L11 YP_006529793.1 COG0081 Ribosomal protein L1 YP_006529799.1 COG0732 Restriction endonuclease S subunits YP_006529815.1 COG0732 Restriction endonuclease S subunits YP_006529816.1 COG0732 Restriction endonuclease S subunits YP_006529818.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_006529822.1 COG0566 rRNA methylases YP_006529823.1 COG0215 Cysteinyl-tRNA synthetase YP_006529824.1 COG0039 Malate/lactate dehydrogenases YP_006529826.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_006529827.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_006529828.1 COG1078 HD superfamily phosphohydrolases YP_006529829.1 COG3343 DNA-directed RNA polymerase, delta subunit YP_006529831.1 COG0290 Translation initiation factor 3 (IF-3) YP_006529833.1 COG0264 Translation elongation factor Ts YP_006529834.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_006529835.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_006529836.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_006529837.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_006529838.1 COG0431 Predicted flavoprotein YP_006529839.1 COG0561 Predicted hydrolases of the HAD superfamily YP_006529840.1 COG0194 Guanylate kinase YP_006529841.1 COG0060 Isoleucyl-tRNA synthetase YP_006529842.1 COG0530 Ca2+/Na+ antiporter YP_006529843.1 COG0618 Exopolyphosphatase-related proteins YP_006529845.1 COG0495 Leucyl-tRNA synthetase YP_006529846.1 COG0173 Aspartyl-tRNA synthetase YP_006529847.1 COG0124 Histidyl-tRNA synthetase YP_006529848.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_006529849.1 COG0536 Predicted GTPase YP_006529852.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_006529853.1 COG0195 Transcription elongation factor YP_006529855.1 COG0781 Transcription termination factor YP_006529856.1 COG0052 Ribosomal protein S2 YP_006529857.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_006529859.1 COG1266 Predicted metal-dependent membrane protease YP_006529860.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_006529861.1 COG0693 Putative intracellular protease/amidase YP_006529864.1 COG1190 Lysyl-tRNA synthetase (class II) YP_006529865.1 COG0587 DNA polymerase III, alpha subunit YP_006529866.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_006529867.1 COG0193 Peptidyl-tRNA hydrolase YP_006529869.1 COG0333 Ribosomal protein L32 YP_006529872.1 COG0208 Ribonucleotide reductase, beta subunit YP_006529873.1 COG1780 Protein involved in ribonucleotide reduction YP_006529874.1 COG0209 Ribonucleotide reductase, alpha subunit YP_006529880.1 COG0732 Restriction endonuclease S subunits YP_006529887.1 COG0514 Superfamily II DNA helicase YP_006529890.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_006529892.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_006529899.1 COG0459 Chaperonin GroEL (HSP60 family) YP_006529907.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_006529908.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_006529909.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_006529910.1 COG0013 Alanyl-tRNA synthetase YP_006529912.1 COG0210 Superfamily I DNA and RNA helicases YP_006529913.1 COG0210 Superfamily I DNA and RNA helicases YP_006529915.1 COG0210 Superfamily I DNA and RNA helicases YP_006529916.1 COG0210 Superfamily I DNA and RNA helicases YP_006529918.1 COG0210 Superfamily I DNA and RNA helicases YP_006529919.1 COG1122 ABC-type cobalt transport system, ATPase component YP_006529920.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters YP_006529922.1 COG1122 ABC-type cobalt transport system, ATPase component YP_006529924.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_006529925.1 COG0227 Ribosomal protein L28 YP_006529926.1 COG0522 Ribosomal protein S4 and related proteins YP_006529927.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_006529928.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_006529930.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_006529931.1 COG3331 Penicillin-binding protein-related factor A, putative recombinase YP_006529932.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_006529933.1 COG2001 Uncharacterized protein conserved in bacteria YP_006529934.1 COG0261 Ribosomal protein L21 YP_006529935.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_006529936.1 COG0103 Ribosomal protein S9 YP_006529937.1 COG0466 ATP-dependent Lon protease, bacterial type YP_006529949.1 COG5256 Translation elongation factor EF-1alpha (GTPase) YP_006529985.1 COG1027 Aspartate ammonia-lyase YP_006529989.1 COG1462 Uncharacterized protein involved in formation of curli polymers YP_006530003.1 COG0658 Predicted membrane metal-binding protein YP_006530008.1 COG0356 F0F1-type ATP synthase, subunit a YP_006530009.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006530010.1 COG0711 F0F1-type ATP synthase, subunit b YP_006530011.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_006530012.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_006530013.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_006530014.1 COG3557 Uncharacterized domain/protein associated with RNAses G and E YP_006530015.1 COG0055 F0F1-type ATP synthase, beta subunit YP_006530017.1 COG0528 Uridylate kinase YP_006530018.1 COG0233 Ribosome recycling factor YP_006530019.1 COG0575 CDP-diglyceride synthetase YP_006530021.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006530022.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_006530032.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_006530042.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006530043.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006530045.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006530049.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_006530056.1 COG0244 Ribosomal protein L10 YP_006530057.1 COG0222 Ribosomal protein L7/L12 YP_006530058.1 COG0051 Ribosomal protein S10 YP_006530059.1 COG0087 Ribosomal protein L3 YP_006530060.1 COG0088 Ribosomal protein L4 YP_006530061.1 COG0089 Ribosomal protein L23 YP_006530085.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_006530101.1 COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog YP_006530102.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_006530107.1 COG0268 Ribosomal protein S20 YP_006530108.1 COG3099 Uncharacterized protein conserved in bacteria YP_006530109.1 COG1161 Predicted GTPases YP_006530110.1 COG0084 Mg-dependent DNase YP_006530112.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_006530113.1 COG1160 Predicted GTPases YP_006530114.1 COG0776 Bacterial nucleoid DNA-binding protein YP_006530115.1 COG0776 Bacterial nucleoid DNA-binding protein YP_006530126.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_006530168.1 COG0732 Restriction endonuclease S subunits YP_006530170.1 COG0732 Restriction endonuclease S subunits YP_006530176.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_006530178.1 COG0203 Ribosomal protein L17 YP_006530180.1 COG1117 ABC-type phosphate transport system, ATPase component YP_006530183.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_006530184.1 COG1624 Uncharacterized conserved protein YP_006530185.1 COG0558 Phosphatidylglycerophosphate synthase YP_006530187.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_006530190.1 COG0048 Ribosomal protein S12 YP_006530191.1 COG0049 Ribosomal protein S7 YP_006530192.1 COG0480 Translation elongation factors (GTPases) YP_006530193.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_006530194.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_006530195.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_006530196.1 COG0569 K+ transport systems, NAD-binding component YP_006530197.1 COG0168 Trk-type K+ transport systems, membrane components YP_006530198.1 COG0516 IMP dehydrogenase/GMP reductase YP_006530199.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_006530200.1 COG0492 Thioredoxin reductase YP_006530201.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_006530202.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_006530206.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_006530207.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_006530208.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_006530212.1 COG0732 Restriction endonuclease S subunits YP_006530213.1 COG0732 Restriction endonuclease S subunits YP_006530214.1 COG0732 Restriction endonuclease S subunits YP_006530221.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_006530234.1 COG1925 Phosphotransferase system, HPr-related proteins YP_006530236.1 COG0335 Ribosomal protein L19 YP_006530237.1 COG0228 Ribosomal protein S16 YP_006530240.1 COG0782 Transcription elongation factor YP_006530241.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_006530242.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_006530243.1 COG0100 Ribosomal protein S11 YP_006530244.1 COG0099 Ribosomal protein S13 YP_006530245.1 COG0257 Ribosomal protein L36 YP_006530246.1 COG0361 Translation initiation factor 1 (IF-1) YP_006530247.1 COG0024 Methionine aminopeptidase YP_006530248.1 COG0563 Adenylate kinase and related kinases YP_006530249.1 COG0201 Preprotein translocase subunit SecY YP_006530250.1 COG0200 Ribosomal protein L15 YP_006530251.1 COG0098 Ribosomal protein S5 YP_006530252.1 COG0256 Ribosomal protein L18 YP_006530253.1 COG0761 Penicillin tolerance protein YP_006530275.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_006530279.1 COG0172 Seryl-tRNA synthetase YP_006530288.1 COG0097 Ribosomal protein L6P/L9E YP_006530289.1 COG0096 Ribosomal protein S8 YP_006530290.1 COG0199 Ribosomal protein S14 YP_006530291.1 COG0094 Ribosomal protein L5 YP_006530292.1 COG0198 Ribosomal protein L24 YP_006530293.1 COG0093 Ribosomal protein L14 YP_006530294.1 COG0186 Ribosomal protein S17 YP_006530295.1 COG0255 Ribosomal protein L29 YP_006530296.1 COG0197 Ribosomal protein L16/L10E YP_006530297.1 COG0092 Ribosomal protein S3 YP_006530298.1 COG0091 Ribosomal protein L22 YP_006530299.1 COG0185 Ribosomal protein S19 YP_006530300.1 COG0090 Ribosomal protein L2 YP_006530303.1 COG0732 Restriction endonuclease S subunits YP_006530304.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006530305.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006530308.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_006530309.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_006530311.1 COG0732 Restriction endonuclease S subunits YP_006530320.1 COG0172 Seryl-tRNA synthetase YP_006530355.1 COG0525 Valyl-tRNA synthetase YP_006530356.1 COG3763 Uncharacterized protein conserved in bacteria YP_006530363.1 COG0018 Arginyl-tRNA synthetase YP_006530364.1 COG1039 Ribonuclease HIII YP_006530365.1 COG0102 Ribosomal protein L13 YP_006530366.1 COG1454 Alcohol dehydrogenase, class IV YP_006530375.1 COG0419 ATPase involved in DNA repair YP_006530381.1 COG0459 Chaperonin GroEL (HSP60 family) YP_006530385.1 COG0419 ATPase involved in DNA repair YP_006530389.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006530390.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006530407.1 COG0480 Translation elongation factors (GTPases) YP_006530410.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_006530411.1 COG0469 Pyruvate kinase YP_006530412.1 COG0205 6-phosphofructokinase YP_006530413.1 COG0148 Enolase YP_006530417.1 COG0443 Molecular chaperone YP_006530418.1 COG0015 Adenylosuccinate lyase YP_006530421.1 COG1536 Flagellar motor switch protein YP_006530424.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_006530433.1 COG1536 Flagellar motor switch protein YP_006530438.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_006530443.1 COG0178 Excinuclease ATPase subunit YP_006530444.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_006530445.1 COG4508 Uncharacterized protein conserved in bacteria YP_006530447.1 COG0292 Ribosomal protein L20 YP_006530448.1 COG0291 Ribosomal protein L35 YP_006530449.1 COG0392 Predicted integral membrane protein YP_006530451.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_006530462.1 COG0840 Methyl-accepting chemotaxis protein YP_006530480.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_006530507.1 COG2200 FOG: EAL domain YP_006530521.1 COG0221 Inorganic pyrophosphatase YP_006530523.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_006530525.1 COG0423 Glycyl-tRNA synthetase (class II) YP_006530526.1 COG0358 DNA primase (bacterial type) YP_006530527.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_006530528.1 COG2255 Holliday junction resolvasome, helicase subunit YP_006530533.1 COG0732 Restriction endonuclease S subunits YP_006530547.1 COG0522 Ribosomal protein S4 and related proteins YP_006530551.1 COG0515 Serine/threonine protein kinase YP_006530560.1 COG0732 Restriction endonuclease S subunits YP_006530561.1 COG0732 Restriction endonuclease S subunits YP_006530577.1 COG0260 Leucyl aminopeptidase YP_006530579.1 COG0441 Threonyl-tRNA synthetase YP_006530580.1 COG1164 Oligoendopeptidase F YP_006530581.1 COG0125 Thymidylate kinase YP_006530582.1 COG0468 RecA/RadA recombinase YP_006530583.1 COG0143 Methionyl-tRNA synthetase YP_006530584.1 COG0552 Signal recognition particle GTPase YP_006530585.1 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism YP_006530586.1 COG0126 3-phosphoglycerate kinase YP_006530587.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_006530588.1 COG0520 Selenocysteine lyase YP_006530589.1 COG0691 tmRNA-binding protein YP_006530590.1 COG0557 Exoribonuclease R YP_006530592.1 COG0267 Ribosomal protein L33 YP_006530593.1 COG0648 Endonuclease IV YP_006530604.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_006530615.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_006530620.1 COG4095 Uncharacterized conserved protein YP_006530621.1 COG0208 Ribonucleotide reductase, beta subunit YP_006530625.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_006530626.1 COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism YP_006530629.1 COG1692 Uncharacterized protein conserved in bacteria YP_006530630.1 COG2890 Methylase of polypeptide chain release factors YP_006530631.1 COG0216 Protein chain release factor A YP_006530632.1 COG0254 Ribosomal protein L31 YP_006530633.1 COG2812 DNA polymerase III, gamma/tau subunits YP_006530636.1 COG0035 Uracil phosphoribosyltransferase YP_006530638.1 COG0550 Topoisomerase IA YP_006530639.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_006530640.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_006530644.1 COG0172 Seryl-tRNA synthetase YP_006530645.1 COG0465 ATP-dependent Zn proteases YP_006530647.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_006530648.1 COG0706 Preprotein translocase subunit YidC YP_006530649.1 COG0594 RNase P protein component YP_006530650.1 COG0230 Ribosomal protein L34