-- dump date 20140619_024025 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003204974.1 392373141 13098916 11..1369 1 NC_013260.1 chromosomal replication initiator protein dnaA 1369 dnaA 13098916 dnaA Candidatus Methylomirabilis oxyfera chromosomal replication initiator protein dnaA YP_003204974.1 11 D 671143 CDS YP_003204975.1 392373142 13098917 1540..2532 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; dihydroflavonol-4-reductase (DFR) (Dihydrokaempferol 4-reductase) 2532 dfrA 13098917 dfrA Candidatus Methylomirabilis oxyfera dihydroflavonol-4-reductase (DFR) (Dihydrokaempferol 4-reductase) YP_003204975.1 1540 D 671143 CDS YP_003204976.1 392373143 13098918 complement(2549..3298) 1 NC_013260.1 cytochrome c biogenesis protein CcdA 3298 ccdA 13098918 ccdA Candidatus Methylomirabilis oxyfera cytochrome c biogenesis protein CcdA YP_003204976.1 2549 R 671143 CDS YP_003204977.1 392373144 13098919 complement(3325..4671) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; hypothetical protein 4671 13098919 DAMO_0004 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204977.1 3325 R 671143 CDS YP_003204978.1 392373145 13098920 complement(4783..6066) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Zn-dependent protease 6066 13098920 DAMO_0005 Candidatus Methylomirabilis oxyfera Zn-dependent protease YP_003204978.1 4783 R 671143 CDS YP_003204979.1 392373146 13098921 complement(6154..6624) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 6624 13098921 DAMO_0006 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204979.1 6154 R 671143 CDS YP_003204980.1 392373147 13098922 complement(6621..7739) 1 NC_013260.1 peptidase S1 and S6, chymotrypsin/Hap 7739 13098922 DAMO_0007 Candidatus Methylomirabilis oxyfera peptidase S1 and S6, chymotrypsin/Hap YP_003204980.1 6621 R 671143 CDS YP_003204981.1 392373148 13098923 complement(7977..8138) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 8138 13098923 DAMO_0008 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204981.1 7977 R 671143 CDS YP_003204982.1 392373149 13098924 8542..9630 1 NC_013260.1 Lipase (Class 3) 9630 13098924 DAMO_0009 Candidatus Methylomirabilis oxyfera Lipase (Class 3) YP_003204982.1 8542 D 671143 CDS YP_003204983.1 392373150 13100084 complement(9707..10489) 1 NC_013260.1 inositol-1-monophosphatase (Inositol-1-phosphatase) (I-1-Pase) 10489 suhB 13100084 suhB Candidatus Methylomirabilis oxyfera inositol-1-monophosphatase (Inositol-1-phosphatase) (I-1-Pase) YP_003204983.1 9707 R 671143 CDS YP_003204984.1 392373151 13100081 10600..10779 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 10779 13100081 DAMO_0011 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204984.1 10600 D 671143 CDS YP_003204985.1 392373152 13100034 10827..12521 1 NC_013260.1 Carbon starvation protein A 12521 cstA 13100034 cstA Candidatus Methylomirabilis oxyfera Carbon starvation protein A YP_003204985.1 10827 D 671143 CDS YP_003204986.1 392373153 13098925 12535..13317 1 NC_013260.1 hypothetical protein 13317 13098925 DAMO_0013 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204986.1 12535 D 671143 CDS YP_003204987.1 392373154 13098926 complement(13417..13737) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 13737 13098926 DAMO_0014 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204987.1 13417 R 671143 CDS YP_003204988.1 392373155 13098927 complement(13734..14123) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 14123 13098927 DAMO_0015 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204988.1 13734 R 671143 CDS YP_003204989.1 392373156 13098928 14693..14887 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 14887 13098928 DAMO_0016 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204989.1 14693 D 671143 CDS YP_003204990.1 392373157 13098929 15082..15282 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 15282 13098929 DAMO_0017 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204990.1 15082 D 671143 CDS YP_003204991.1 392373158 13098930 complement(15303..15773) 1 NC_013260.1 hypothetical protein 15773 13098930 DAMO_0018 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204991.1 15303 R 671143 CDS YP_003204992.1 392373159 13098830 complement(15891..16040) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 16040 13098830 DAMO_0019 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204992.1 15891 R 671143 CDS YP_003204993.1 392373160 13098931 16199..17140 1 NC_013260.1 Kelch repeat-containing protein 17140 13098931 DAMO_0021 Candidatus Methylomirabilis oxyfera Kelch repeat-containing protein YP_003204993.1 16199 D 671143 CDS YP_003204994.1 392373161 13100060 complement(17112..17285) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 17285 13100060 DAMO_0022 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204994.1 17112 R 671143 CDS YP_003204995.1 392373162 13098932 complement(17308..17721) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 17721 13098932 DAMO_0023 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204995.1 17308 R 671143 CDS YP_003204996.1 392373163 13098933 17959..18201 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 18201 13098933 DAMO_0025 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204996.1 17959 D 671143 CDS YP_003204997.1 392373164 13098934 18198..19535 1 NC_013260.1 Maturase; integron/retron-type RNA-directed DNA polymerase (Reverse transcriptase); part of type II intron 19535 13098934 DAMO_0026 Candidatus Methylomirabilis oxyfera Maturase; integron/retron-type RNA-directed DNA polymerase (Reverse transcriptase); part of type II intron YP_003204997.1 18198 D 671143 CDS YP_003204998.1 392373165 13098935 19701..19808 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 19808 13098935 DAMO_0027 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204998.1 19701 D 671143 CDS YP_003204999.1 392373166 13098936 complement(19886..20509) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 20509 13098936 DAMO_0028 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003204999.1 19886 R 671143 CDS YP_003205000.1 392373167 13098937 complement(20536..21894) 1 NC_013260.1 transposase 21894 13098937 DAMO_0029 Candidatus Methylomirabilis oxyfera transposase YP_003205000.1 20536 R 671143 CDS YP_003205001.1 392373168 13098938 complement(22361..23131) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; insertion sequence IS21 ATP-binding protein 23131 13098938 DAMO_0031 Candidatus Methylomirabilis oxyfera insertion sequence IS21 ATP-binding protein YP_003205001.1 22361 R 671143 CDS YP_003205002.1 392373169 13098939 complement(23128..24657) 1 NC_013260.1 transposase 24657 13098939 DAMO_0032 Candidatus Methylomirabilis oxyfera transposase YP_003205002.1 23128 R 671143 CDS YP_003205003.1 392373170 13098940 25298..25576 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 25576 13098940 DAMO_0034 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205003.1 25298 D 671143 CDS YP_003205004.1 392373171 13098941 25750..26943 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Dehydrogenases 26943 13098941 DAMO_0035 Candidatus Methylomirabilis oxyfera Dehydrogenases YP_003205004.1 25750 D 671143 CDS YP_003205005.1 392373172 13098942 26943..29591 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11936079; Product type t : transporter; copper-transporting P-type ATPase 29591 actP 13098942 actP Candidatus Methylomirabilis oxyfera copper-transporting P-type ATPase YP_003205005.1 26943 D 671143 CDS YP_003205006.1 392373173 13098943 29991..30089 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 30089 13098943 DAMO_0038 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205006.1 29991 D 671143 CDS YP_003205007.1 392373174 13098944 30102..30248 1 NC_013260.1 YHS domain-containing protein 30248 13098944 DAMO_0039 Candidatus Methylomirabilis oxyfera YHS domain-containing protein YP_003205007.1 30102 D 671143 CDS YP_003205008.1 392373175 13098945 complement(30287..31453) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 31453 13098945 DAMO_0040 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205008.1 30287 R 671143 CDS YP_003205009.1 392373176 13098946 complement(31470..32627) 1 NC_013260.1 ABC transporter permease 32627 13098946 DAMO_0041 Candidatus Methylomirabilis oxyfera ABC transporter permease YP_003205009.1 31470 R 671143 CDS YP_003205010.1 392373177 13098947 complement(32635..33357) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter ATP-binding protein 33357 13098947 DAMO_0042 Candidatus Methylomirabilis oxyfera ABC transporter ATP-binding protein YP_003205010.1 32635 R 671143 CDS YP_003205011.1 392373178 13098948 complement(33377..34588) 1 NC_013260.1 Secretion protein HlyD 34588 13098948 DAMO_0043 Candidatus Methylomirabilis oxyfera Secretion protein HlyD YP_003205011.1 33377 R 671143 CDS YP_003205012.1 392373179 13098949 complement(34617..35432) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; nucleoside phosphorylase 35432 13098949 DAMO_0044 Candidatus Methylomirabilis oxyfera nucleoside phosphorylase YP_003205012.1 34617 R 671143 CDS YP_003205013.1 392373180 13098950 complement(35392..37356) 1 NC_013260.1 squalene-hopene cyclase 37356 shc 13098950 shc Candidatus Methylomirabilis oxyfera squalene-hopene cyclase YP_003205013.1 35392 R 671143 CDS YP_003205014.1 392373181 13099893 complement(37398..37871) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; radical SAM domain-containing protein (fragment), 3' end 37871 13099893 DAMO_0046 Candidatus Methylomirabilis oxyfera radical SAM domain-containing protein (fragment), 3' end YP_003205014.1 37398 R 671143 CDS YP_003205015.1 392373182 13098951 complement(37700..38398) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; radical SAM domain-containing protein (fragment), 5' end 38398 13098951 DAMO_0047 Candidatus Methylomirabilis oxyfera radical SAM domain-containing protein (fragment), 5' end YP_003205015.1 37700 R 671143 CDS YP_003205016.1 392373183 13098952 complement(38395..38601) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 38601 13098952 DAMO_0048 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205016.1 38395 R 671143 CDS YP_003205017.1 392373184 13098953 complement(39044..40162) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; DegT/DnrJ/EryC1/StrS aminotransferase protein family 40162 13098953 DAMO_0051 Candidatus Methylomirabilis oxyfera DegT/DnrJ/EryC1/StrS aminotransferase protein family YP_003205017.1 39044 R 671143 CDS YP_003205018.1 392373185 13098954 40441..40875 1 NC_013260.1 S-adenosylmethionine decarboxylase 40875 13098954 DAMO_0052 Candidatus Methylomirabilis oxyfera S-adenosylmethionine decarboxylase YP_003205018.1 40441 D 671143 CDS YP_003205019.1 392373186 13097840 40844..41761 1 NC_013260.1 Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) 41761 speE 13097840 speE Candidatus Methylomirabilis oxyfera Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) YP_003205019.1 40844 D 671143 CDS YP_003205020.1 392373187 13097841 41926..43389 1 NC_013260.1 Arginine decarboxylase 43389 speA 13097841 speA Candidatus Methylomirabilis oxyfera Arginine decarboxylase YP_003205020.1 41926 D 671143 CDS YP_003205021.1 392373188 13097842 43546..45093 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 9175857; Product type t : transporter; protein-export membrane protein secD 45093 secD 13097842 secD Candidatus Methylomirabilis oxyfera protein-export membrane protein secD YP_003205021.1 43546 D 671143 CDS YP_003205022.1 392373189 13098815 45177..46115 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 15919996, 2170107; Product type t : transporter; protein-export membrane protein secF 46115 secF 13098815 secF Candidatus Methylomirabilis oxyfera protein-export membrane protein secF YP_003205022.1 45177 D 671143 CDS YP_003205023.1 392373190 13097843 46253..46930 1 NC_013260.1 phosphoheptose isomerase (Sedoheptulose 7-phosphate isomerase) 46930 gmhA 13097843 gmhA Candidatus Methylomirabilis oxyfera phosphoheptose isomerase (Sedoheptulose 7-phosphate isomerase) YP_003205023.1 46253 D 671143 CDS YP_003205024.1 392373191 13097844 46945..48012 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Serine-type D-Ala-D-Ala carboxypeptidase 48012 13097844 DAMO_0058 Candidatus Methylomirabilis oxyfera Serine-type D-Ala-D-Ala carboxypeptidase YP_003205024.1 46945 D 671143 CDS YP_003205025.1 392373192 13097845 48207..49346 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 7768823; Product type f : factor; DNA processing protein DprA 49346 DprA 13097845 DprA Candidatus Methylomirabilis oxyfera DNA processing protein DprA YP_003205025.1 48207 D 671143 CDS YP_003205026.1 392373193 13097846 49438..51915 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; DNA topoisomerase I 51915 topA 13097846 topA Candidatus Methylomirabilis oxyfera DNA topoisomerase I YP_003205026.1 49438 D 671143 CDS YP_003205027.1 392373194 13097847 51912..53243 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 53243 13097847 DAMO_0061 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205027.1 51912 D 671143 CDS YP_003205028.1 392373195 13098819 complement(53306..53722) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 53722 13098819 DAMO_0062 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205028.1 53306 R 671143 CDS YP_003205029.1 392373196 13098818 complement(53719..53994) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Transcription regulator, SpoVT/AbrB family 53994 13098818 DAMO_0063 Candidatus Methylomirabilis oxyfera Transcription regulator, SpoVT/AbrB family YP_003205029.1 53719 R 671143 CDS YP_003205030.1 392373197 13098805 complement(54485..54685) 1 NC_013260.1 hypothetical protein 54685 13098805 DAMO_0064 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205030.1 54485 R 671143 CDS YP_003205031.1 392373198 13098807 54995..55633 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 55633 13098807 DAMO_0066 Candidatus Methylomirabilis oxyfera membrane protein YP_003205031.1 54995 D 671143 CDS YP_003205032.1 392373199 13098410 56053..56430 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 56430 13098410 DAMO_0068 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205032.1 56053 D 671143 CDS YP_003205033.1 392373200 13097848 complement(56576..57733) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 57733 13097848 DAMO_0069 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205033.1 56576 R 671143 CDS YP_003205034.1 392373201 13100172 57960..59009 1 NC_013260.1 tyrosine recombinase XerC 59009 xerC 13100172 xerC Candidatus Methylomirabilis oxyfera tyrosine recombinase XerC YP_003205034.1 57960 D 671143 CDS YP_003205035.1 392373202 13098854 59107..59586 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12646382, 7682410, 8244018; Product type e : enzyme; ATP-dependent protease hslV (protease subunit of a proteasome-like degradation complex) 59586 hslV 13098854 hslV Candidatus Methylomirabilis oxyfera ATP-dependent protease hslV (protease subunit of a proteasome-like degradation complex) YP_003205035.1 59107 D 671143 CDS YP_003205036.1 392373203 13097849 59791..61146 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8244018; Product type e : enzyme; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein 61146 hslU 13097849 hslU Candidatus Methylomirabilis oxyfera ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein YP_003205036.1 59791 D 671143 CDS YP_003205037.1 392373204 13097850 61203..62114 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; acetylglutamate kinase (AGK) (N-acetyl-L-glutamate 5-phosphotransferase) 62114 argB 13097850 argB Candidatus Methylomirabilis oxyfera acetylglutamate kinase (AGK) (N-acetyl-L-glutamate 5-phosphotransferase) YP_003205037.1 61203 D 671143 CDS YP_003205038.1 392373205 13097851 62115..63314 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2199330, 7929012; Product type e : enzyme; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent 63314 argD 13097851 argD Candidatus Methylomirabilis oxyfera acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent YP_003205038.1 62115 D 671143 CDS YP_003205039.1 392373206 13097852 63311..64246 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; ornithine carbamoyltransferase 64246 argF 13097852 argF Candidatus Methylomirabilis oxyfera ornithine carbamoyltransferase YP_003205039.1 63311 D 671143 CDS YP_003205040.1 392373207 13097853 64329..64577 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 64577 13097853 DAMO_0076 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205040.1 64329 D 671143 CDS YP_003205041.1 392373208 13097854 64585..64959 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 64959 13097854 DAMO_0078 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205041.1 64585 D 671143 CDS YP_003205042.1 392373209 13097855 65160..66278 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 66278 13097855 DAMO_0079 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205042.1 65160 D 671143 CDS YP_003205043.1 392373210 13098886 complement(66235..66519) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 66519 13098886 DAMO_0080 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205043.1 66235 R 671143 CDS YP_003205044.1 392373211 13098454 66540..66734 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 66734 13098454 DAMO_0081 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205044.1 66540 D 671143 CDS YP_003205045.1 392373212 13098453 66766..68028 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 68028 13098453 DAMO_0082 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205045.1 66766 D 671143 CDS YP_003205046.1 392373213 13099906 68105..68815 1 NC_013260.1 DNA repair protein RadC-like protein 68815 radC 13099906 radC Candidatus Methylomirabilis oxyfera DNA repair protein RadC-like protein YP_003205046.1 68105 D 671143 CDS YP_003205047.1 392373214 13099908 complement(68840..69286) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 69286 13099908 DAMO_0084 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205047.1 68840 R 671143 CDS YP_003205048.1 392373215 13099909 69473..70705 1 NC_013260.1 Argininosuccinate synthase (Citrulline--aspartate ligase) 70705 argG 13099909 argG Candidatus Methylomirabilis oxyfera Argininosuccinate synthase (Citrulline--aspartate ligase) YP_003205048.1 69473 D 671143 CDS YP_003205049.1 392373216 13097856 70702..72099 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; argininosuccinate lyase 72099 argH 13097856 argH Candidatus Methylomirabilis oxyfera argininosuccinate lyase YP_003205049.1 70702 D 671143 CDS YP_003205050.1 392373217 13097857 72101..73147 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Fibronectin, type III 73147 13097857 DAMO_0087 Candidatus Methylomirabilis oxyfera Fibronectin, type III YP_003205050.1 72101 D 671143 CDS YP_003205051.1 392373218 13097858 73179..75128 1 NC_013260.1 Selenocysteine-specific elongation factor (SelB translation factor) 75128 selB 13097858 selB Candidatus Methylomirabilis oxyfera Selenocysteine-specific elongation factor (SelB translation factor) YP_003205051.1 73179 D 671143 CDS YP_003205052.1 392373219 13097859 75152..75358 1 NC_013260.1 Sec-independent protein translocase protein tatA/E-like protein 75358 tatA 13097859 tatA Candidatus Methylomirabilis oxyfera Sec-independent protein translocase protein tatA/E-like protein YP_003205052.1 75152 D 671143 CDS YP_003205053.1 392373220 13097860 75387..76709 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9765575; Product type e : enzyme; UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) 76709 rkpK 13097860 rkpK Candidatus Methylomirabilis oxyfera UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) YP_003205053.1 75387 D 671143 CDS YP_003205054.1 392373221 13097861 76699..76884 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 76884 13097861 DAMO_0091 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205054.1 76699 D 671143 CDS YP_003205055.1 392373222 13098711 76878..77000 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 77000 13098711 DAMO_0092 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205055.1 76878 D 671143 CDS YP_003205056.1 392373223 13097862 77023..78177 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11250201; Product type e : enzyme; nicotinamide nucleotide transhydrogenase, subunit alpha1 78177 pntA 13097862 pntA Candidatus Methylomirabilis oxyfera nicotinamide nucleotide transhydrogenase, subunit alpha1 YP_003205056.1 77023 D 671143 CDS YP_003205057.1 392373224 13099910 78167..78463 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8075801; Product type e : enzyme; nicotinamide nucleotide transhydrogenase subunit alpha2 78463 pntA 13099910 pntA Candidatus Methylomirabilis oxyfera nicotinamide nucleotide transhydrogenase subunit alpha2 YP_003205057.1 78167 D 671143 CDS YP_003205058.1 392373225 13099911 78460..79839 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11250201; Product type e : enzyme; pyridine nucleotide transhydrogenase (proton pump) subunit beta 79839 pntB 13099911 pntB Candidatus Methylomirabilis oxyfera pyridine nucleotide transhydrogenase (proton pump) subunit beta YP_003205058.1 78460 D 671143 CDS YP_003205059.1 392373226 13097863 79964..81118 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 81118 13097863 DAMO_0096 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205059.1 79964 D 671143 CDS YP_003205060.1 392373227 13098810 81115..82422 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Diaminopimelate decarboxylase 82422 13098810 DAMO_0097 Candidatus Methylomirabilis oxyfera Diaminopimelate decarboxylase YP_003205060.1 81115 D 671143 CDS YP_003205061.1 392373228 13098834 82764..84941 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; TonB-dependent receptor 84941 13098834 DAMO_0098 Candidatus Methylomirabilis oxyfera TonB-dependent receptor YP_003205061.1 82764 D 671143 CDS YP_003205062.1 392373229 13098731 85010..86488 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Sensor protein 86488 13098731 DAMO_0099 Candidatus Methylomirabilis oxyfera Sensor protein YP_003205062.1 85010 D 671143 CDS YP_003205063.1 392373230 13097864 86481..87899 1 NC_013260.1 Two component, sigma54 specific, transcriptional regulator, Fis family 87899 13097864 DAMO_0100 Candidatus Methylomirabilis oxyfera Two component, sigma54 specific, transcriptional regulator, Fis family YP_003205063.1 86481 D 671143 CDS YP_003205064.1 392373231 13097865 88135..90372 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; TonB-dependent siderophore receptor 90372 13097865 DAMO_0102 Candidatus Methylomirabilis oxyfera TonB-dependent siderophore receptor YP_003205064.1 88135 D 671143 CDS YP_003205065.1 392373232 13098667 complement(90479..90721) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 90721 13098667 DAMO_0103 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205065.1 90479 R 671143 CDS YP_003205066.1 392373233 13098668 90757..92226 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 92226 13098668 DAMO_0104 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003205066.1 90757 D 671143 CDS YP_003205067.1 392373234 13098669 92230..93606 1 NC_013260.1 Two component, sigma54 specific, transcriptional regulator, Fis family 93606 13098669 DAMO_0105 Candidatus Methylomirabilis oxyfera Two component, sigma54 specific, transcriptional regulator, Fis family YP_003205067.1 92230 D 671143 CDS YP_003205068.1 392373235 13097866 complement(93700..93972) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 93972 13097866 DAMO_0106 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205068.1 93700 R 671143 CDS YP_003205069.1 392373236 13097867 complement(94233..94637) 1 NC_013260.1 hypothetical protein 94637 13097867 DAMO_0107 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205069.1 94233 R 671143 CDS YP_003205070.1 392373237 13097868 complement(94630..94833) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 94833 13097868 DAMO_0108 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205070.1 94630 R 671143 CDS YP_003205071.1 392373238 13097869 complement(94881..95231) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 95231 13097869 DAMO_0109 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205071.1 94881 R 671143 CDS YP_003205072.1 392373239 13097870 complement(95436..95687) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 95687 13097870 DAMO_0111 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205072.1 95436 R 671143 CDS YP_003205073.1 392373240 13097871 96644..98449 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; methanol dehydrogenase large subunit (mxaF1) 98449 mxaF 13097871 mxaF Candidatus Methylomirabilis oxyfera methanol dehydrogenase large subunit (mxaF1) YP_003205073.1 96644 D 671143 CDS YP_003205074.1 392373241 13097872 98446..99342 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 99342 13097872 DAMO_0113 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205074.1 98446 D 671143 CDS YP_003205075.1 392373242 13097873 99339..99842 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; mxaG (Cytochrome c1) involved in Methanol dehydrogenase (mxaG1) 99842 mxaG 13097873 mxaG Candidatus Methylomirabilis oxyfera mxaG (Cytochrome c1) involved in Methanol dehydrogenase (mxaG1) YP_003205075.1 99339 D 671143 CDS YP_003205076.1 392373243 13097874 99878..100162 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; methanol dehydrogenase, small subunit (mxaI) 100162 mxaI 13097874 mxaI Candidatus Methylomirabilis oxyfera methanol dehydrogenase, small subunit (mxaI) YP_003205076.1 99878 D 671143 CDS YP_003205077.1 392373244 13097875 100243..101262 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 101262 13097875 DAMO_0116 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205077.1 100243 D 671143 CDS YP_003205078.1 392373245 13097876 101259..102146 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 102146 13097876 DAMO_0117 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205078.1 101259 D 671143 CDS YP_003205079.1 392373246 13097877 102172..103125 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; mxaA protein, involved in Ca2+ insertion in methanol dehydrogenase 103125 13097877 DAMO_0118 Candidatus Methylomirabilis oxyfera mxaA protein, involved in Ca2+ insertion in methanol dehydrogenase YP_003205079.1 102172 D 671143 CDS YP_003205080.1 392373247 13097878 103122..104108 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; mxaC protein, involved in Ca2+ insertion in methanol dehydrogenase 104108 13097878 DAMO_0119 Candidatus Methylomirabilis oxyfera mxaC protein, involved in Ca2+ insertion in methanol dehydrogenase YP_003205080.1 103122 D 671143 CDS YP_003205081.1 392373248 13097879 104096..104662 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; mxaK protein, involved in Ca2+ insertion into methanol dehydrogenase 104662 13097879 DAMO_0120 Candidatus Methylomirabilis oxyfera mxaK protein, involved in Ca2+ insertion into methanol dehydrogenase YP_003205081.1 104096 D 671143 CDS YP_003205082.1 392373249 13098576 104685..106304 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; fused mxaL and mxaD proteins, involved in Ca2+ insertion into methanol dehydrogenase 106304 13098576 DAMO_0121 Candidatus Methylomirabilis oxyfera fused mxaL and mxaD proteins, involved in Ca2+ insertion into methanol dehydrogenase YP_003205082.1 104685 D 671143 CDS YP_003205083.1 392373250 13097880 106308..107309 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 107309 13097880 DAMO_0122 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205083.1 106308 D 671143 CDS YP_003205084.1 392373251 13098579 107814..109718 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; methanol dehydrogenase large subunit 109718 mxaF 13098579 mxaF Candidatus Methylomirabilis oxyfera methanol dehydrogenase large subunit YP_003205084.1 107814 D 671143 CDS YP_003205085.1 392373252 13098582 109814..111532 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 111532 13098582 DAMO_0125 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205085.1 109814 D 671143 CDS YP_003205086.1 392373253 13097881 111733..112332 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; mxaG (Cytochrome c1) involved in Methanol dehydrogenase (mxaG2) 112332 mxaG 13097881 mxaG Candidatus Methylomirabilis oxyfera mxaG (Cytochrome c1) involved in Methanol dehydrogenase (mxaG2) YP_003205086.1 111733 D 671143 CDS YP_003205087.1 392373254 13097882 112329..113297 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 113297 13097882 DAMO_0128 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205087.1 112329 D 671143 CDS YP_003205088.1 392373255 13097883 113329..115674 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type prc : putative receptor; TonB-dependent receptor 115674 13097883 DAMO_0129 Candidatus Methylomirabilis oxyfera TonB-dependent receptor YP_003205088.1 113329 D 671143 CDS YP_003205089.1 392373256 13097884 complement(115663..115848) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 115848 13097884 DAMO_0130 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205089.1 115663 R 671143 CDS YP_003205090.1 392373257 13097885 115999..116976 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type prc : putative receptor; TonB-like protein 116976 13097885 DAMO_0131 Candidatus Methylomirabilis oxyfera TonB-like protein YP_003205090.1 115999 D 671143 CDS YP_003205091.1 392373258 13097886 117072..118307 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 118307 13097886 DAMO_0132 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205091.1 117072 D 671143 CDS YP_003205092.1 392373259 13097793 118525..120582 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 120582 13097793 DAMO_0133 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205092.1 118525 D 671143 CDS YP_003205093.1 392373260 13098577 120804..122645 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; methanol dehydrogenase large subunit 122645 mxaF 13098577 mxaF Candidatus Methylomirabilis oxyfera methanol dehydrogenase large subunit YP_003205093.1 120804 D 671143 CDS YP_003205094.1 392373261 13097794 122841..123731 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 123731 13097794 DAMO_0136 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205094.1 122841 D 671143 CDS YP_003205095.1 392373262 13098580 123783..124277 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; mxaG (cytochrome c1) involved in methanol dehydrogenase (mxaG3) 124277 mxaG 13098580 mxaG Candidatus Methylomirabilis oxyfera mxaG (cytochrome c1) involved in methanol dehydrogenase (mxaG3) YP_003205095.1 123783 D 671143 CDS YP_003205096.1 392373263 13097795 124287..124715 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 124715 13097795 DAMO_0139 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205096.1 124287 D 671143 CDS YP_003205097.1 392373264 13097796 124979..125185 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10618253, 1597410, 2404279; Product type f : factor; Cold shock protein, DNA binding 125185 cspA 13097796 cspA Candidatus Methylomirabilis oxyfera Cold shock protein, DNA binding YP_003205097.1 124979 D 671143 CDS YP_003205098.1 392373265 13097797 complement(125285..125815) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 125815 13097797 DAMO_0141 Candidatus Methylomirabilis oxyfera membrane protein YP_003205098.1 125285 R 671143 CDS YP_003205099.1 392373266 13097798 complement(125874..126356) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 126356 13097798 DAMO_0142 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205099.1 125874 R 671143 CDS YP_003205100.1 392373267 13097799 complement(126359..126892) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 126892 13097799 DAMO_0143 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205100.1 126359 R 671143 CDS YP_003205101.1 392373268 13097800 complement(127343..128584) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; dioxygenase VC_1345 128584 13097800 DAMO_0145 Candidatus Methylomirabilis oxyfera dioxygenase VC_1345 YP_003205101.1 127343 R 671143 CDS YP_003205102.1 392373269 13098578 complement(128613..129296) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 129296 13098578 DAMO_0146 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205102.1 128613 R 671143 CDS YP_003205103.1 392373270 13097801 complement(129301..130062) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 130062 13097801 DAMO_0147 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205103.1 129301 R 671143 CDS YP_003205104.1 392373271 13098581 complement(130059..130748) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 130748 13098581 DAMO_0148 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205104.1 130059 R 671143 CDS YP_003205105.1 392373272 13097802 complement(130769..131578) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 131578 13097802 DAMO_0149 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205105.1 130769 R 671143 CDS YP_003205106.1 392373273 13100058 132010..132243 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 132243 13100058 DAMO_0150 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205106.1 132010 D 671143 CDS YP_003205107.1 392373274 13097803 132247..132549 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 132549 13097803 DAMO_0151 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205107.1 132247 D 671143 CDS YP_003205108.1 392373275 13097804 132958..134448 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; aldehyde dehydrogenase ycbD 134448 ycbD 13097804 ycbD Candidatus Methylomirabilis oxyfera aldehyde dehydrogenase ycbD YP_003205108.1 132958 D 671143 CDS YP_003205109.1 392373276 13097805 134451..135257 1 NC_013260.1 amidinotransferase family protein 135257 13097805 DAMO_0153 Candidatus Methylomirabilis oxyfera amidinotransferase family protein YP_003205109.1 134451 D 671143 CDS YP_003205110.1 392373277 13097806 135254..136441 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; succinylornithine transaminase, also has acetylornitine transaminase activity, PLP-dependent 136441 argM 13097806 argM Candidatus Methylomirabilis oxyfera succinylornithine transaminase, also has acetylornitine transaminase activity, PLP-dependent YP_003205110.1 135254 D 671143 CDS YP_003205111.1 392373278 13097807 136442..136609 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 136609 13097807 DAMO_0155 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205111.1 136442 D 671143 CDS YP_003205112.1 392373279 13097808 136612..138237 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 6308579; Product type pe : putative enzyme; acetolactate synthase large subunit 138237 13097808 DAMO_0156 Candidatus Methylomirabilis oxyfera acetolactate synthase large subunit YP_003205112.1 136612 D 671143 CDS YP_003205113.1 392373280 13097809 138596..140095 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; outermembrane protein 140095 13097809 DAMO_0158 Candidatus Methylomirabilis oxyfera outermembrane protein YP_003205113.1 138596 D 671143 CDS YP_003205114.1 392373281 13097810 140394..140906 1 NC_013260.1 Orotate phosphoribosyltransferase 140906 13097810 DAMO_0159 Candidatus Methylomirabilis oxyfera Orotate phosphoribosyltransferase YP_003205114.1 140394 D 671143 CDS YP_003205115.1 392373282 13097811 140998..142875 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 142875 13097811 DAMO_0160 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205115.1 140998 D 671143 CDS YP_003205116.1 392373283 13097812 complement(143012..143656) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 143656 13097812 DAMO_0161 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205116.1 143012 R 671143 CDS YP_003205117.1 392373284 13098893 complement(143675..145471) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 145471 13098893 DAMO_0162 Candidatus Methylomirabilis oxyfera membrane protein YP_003205117.1 143675 R 671143 CDS YP_003205118.1 392373285 13097813 complement(145606..146070) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 146070 13097813 DAMO_0163 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205118.1 145606 R 671143 CDS YP_003205119.1 392373286 13099913 complement(146134..147594) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 147594 13099913 DAMO_0164 Candidatus Methylomirabilis oxyfera membrane protein YP_003205119.1 146134 R 671143 CDS YP_003205120.1 392373287 13097814 complement(147736..148335) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; peroxiredoxin (Thioredoxin reductase) (26 kDa antigen) 148335 tsaA 13097814 tsaA Candidatus Methylomirabilis oxyfera peroxiredoxin (Thioredoxin reductase) (26 kDa antigen) YP_003205120.1 147736 R 671143 CDS YP_003205121.1 392373288 13097815 complement(148386..148706) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 148706 13097815 DAMO_0166 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205121.1 148386 R 671143 CDS YP_003205122.1 392373289 13097816 complement(149002..149811) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 149811 13097816 DAMO_0167 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205122.1 149002 R 671143 CDS YP_003205123.1 392373290 13097817 150450..151427 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 151427 13097817 DAMO_0170 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205123.1 150450 D 671143 CDS YP_003205124.1 392373291 13097818 151559..151834 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 151834 13097818 DAMO_0171 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205124.1 151559 D 671143 CDS YP_003205125.1 392373292 13097819 152064..152606 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 152606 13097819 DAMO_0172 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205125.1 152064 D 671143 CDS YP_003205126.1 392373293 13097820 152649..152870 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 152870 13097820 DAMO_0173 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205126.1 152649 D 671143 CDS YP_003205127.1 392373294 13097821 152972..153985 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; fructose 1,6-bisphosphatase II 153985 cbbF 13097821 cbbF Candidatus Methylomirabilis oxyfera fructose 1,6-bisphosphatase II YP_003205127.1 152972 D 671143 CDS YP_003205128.1 392373295 13097822 154023..155087 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; Fructose-bisphosphate aldolase 155087 cbbA 13097822 cbbA Candidatus Methylomirabilis oxyfera Fructose-bisphosphate aldolase YP_003205128.1 154023 D 671143 CDS YP_003205129.1 392373296 13098871 155091..155756 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) 155756 cbbE 13098871 cbbE Candidatus Methylomirabilis oxyfera ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) YP_003205129.1 155091 D 671143 CDS YP_003205130.1 392373297 13097823 155911..156711 1 NC_013260.1 peptidase M48, Ste24p 156711 13097823 DAMO_0177 Candidatus Methylomirabilis oxyfera peptidase M48, Ste24p YP_003205130.1 155911 D 671143 CDS YP_003205131.1 392373298 13097824 complement(156772..157947) 1 NC_013260.1 cellulase 157947 13097824 DAMO_0178 Candidatus Methylomirabilis oxyfera cellulase YP_003205131.1 156772 R 671143 CDS YP_003205132.1 392373299 13097825 complement(157966..159486) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 159486 13097825 DAMO_0179 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205132.1 157966 R 671143 CDS YP_003205133.1 392373300 13097826 complement(159499..159990) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 159990 13097826 DAMO_0180 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205133.1 159499 R 671143 CDS YP_003205134.1 392373301 13097827 complement(160005..160430) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 160430 13097827 DAMO_0181 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205134.1 160005 R 671143 CDS YP_003205135.1 392373302 13097828 complement(160427..162571) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Cellulose synthase (UDP-forming) 162571 13097828 DAMO_0182 Candidatus Methylomirabilis oxyfera Cellulose synthase (UDP-forming) YP_003205135.1 160427 R 671143 CDS YP_003205136.1 392373303 13100023 162592..162747 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 162747 13100023 DAMO_0183 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205136.1 162592 D 671143 CDS YP_003205137.1 392373304 13100021 162960..164909 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7751300; Product type e : enzyme; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) 164909 acsA 13100021 acsA Candidatus Methylomirabilis oxyfera acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) YP_003205137.1 162960 D 671143 CDS YP_003205138.1 392373305 13100022 complement(164939..165613) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Lipoprotein 165613 13100022 DAMO_0186 Candidatus Methylomirabilis oxyfera Lipoprotein YP_003205138.1 164939 R 671143 CDS YP_003205139.1 392373306 13097829 complement(165722..168742) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 168742 13097829 DAMO_0188 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205139.1 165722 R 671143 CDS YP_003205140.1 392373307 13097830 169097..169747 1 NC_013260.1 LuxR family two component transcriptional regulator 169747 13097830 DAMO_0189 Candidatus Methylomirabilis oxyfera LuxR family two component transcriptional regulator YP_003205140.1 169097 D 671143 CDS YP_003205141.1 392373308 13097831 169893..170093 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 170093 13097831 DAMO_0190 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205141.1 169893 D 671143 CDS YP_003205142.1 392373309 13097832 170090..170578 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 170578 13097832 DAMO_0191 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205142.1 170090 D 671143 CDS YP_003205143.1 392373310 13097833 170624..171940 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 171940 13097833 DAMO_0192 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205143.1 170624 D 671143 CDS YP_003205144.1 392373311 13097834 172034..173122 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Polysaccharide export protein 173122 13097834 DAMO_0193 Candidatus Methylomirabilis oxyfera Polysaccharide export protein YP_003205144.1 172034 D 671143 CDS YP_003205145.1 392373312 13097835 173300..175609 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Protein-tyrosine kinase 175609 13097835 DAMO_0194 Candidatus Methylomirabilis oxyfera Protein-tyrosine kinase YP_003205145.1 173300 D 671143 CDS YP_003205146.1 392373313 13099891 175627..176907 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 176907 13099891 DAMO_0196 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205146.1 175627 D 671143 CDS YP_003205147.1 392373314 13097836 176914..178359 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; glycosyl transferase 178359 13097836 DAMO_0197 Candidatus Methylomirabilis oxyfera glycosyl transferase YP_003205147.1 176914 D 671143 CDS YP_003205148.1 392373315 13097837 178541..179944 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 179944 13097837 DAMO_0199 Candidatus Methylomirabilis oxyfera membrane protein YP_003205148.1 178541 D 671143 CDS YP_003205149.1 392373316 13097838 179965..181554 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 181554 13097838 DAMO_0200 Candidatus Methylomirabilis oxyfera membrane protein YP_003205149.1 179965 D 671143 CDS YP_003205150.1 392373317 13097839 181584..182399 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 182399 13097839 DAMO_0201 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205150.1 181584 D 671143 CDS YP_003205151.1 392373318 13097753 182528..182839 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 182839 13097753 DAMO_0202 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205151.1 182528 D 671143 CDS YP_003205152.1 392373319 13097754 182836..184005 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase group 1 184005 13097754 DAMO_0203 Candidatus Methylomirabilis oxyfera Glycosyl transferase group 1 YP_003205152.1 182836 D 671143 CDS YP_003205153.1 392373320 13097755 184044..185183 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyltransferase, group 1 family protein 185183 13097755 DAMO_0204 Candidatus Methylomirabilis oxyfera Glycosyltransferase, group 1 family protein YP_003205153.1 184044 D 671143 CDS YP_003205154.1 392373321 13097756 185237..186466 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase, group 1 186466 13097756 DAMO_0205 Candidatus Methylomirabilis oxyfera Glycosyl transferase, group 1 YP_003205154.1 185237 D 671143 CDS YP_003205155.1 392373322 13097757 186463..188406 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 188406 13097757 DAMO_0206 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205155.1 186463 D 671143 CDS YP_003205156.1 392373323 13097758 188403..189395 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 189395 13097758 DAMO_0207 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205156.1 188403 D 671143 CDS YP_003205157.1 392373324 13097759 189497..190378 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 190378 13097759 DAMO_0208 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205157.1 189497 D 671143 CDS YP_003205158.1 392373325 13097760 190524..191717 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase, group 1 191717 13097760 DAMO_0210 Candidatus Methylomirabilis oxyfera Glycosyl transferase, group 1 YP_003205158.1 190524 D 671143 CDS YP_003205159.1 392373326 13097761 191870..192688 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 192688 13097761 DAMO_0211 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205159.1 191870 D 671143 CDS YP_003205160.1 392373327 13097762 complement(192874..193884) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 193884 13097762 DAMO_0212 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205160.1 192874 R 671143 CDS YP_003205161.1 392373328 13097763 complement(194100..196130) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 196130 13097763 DAMO_0214 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205161.1 194100 R 671143 CDS YP_003205162.1 392373329 13097764 complement(196794..197192) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 197192 13097764 DAMO_0215 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205162.1 196794 R 671143 CDS YP_003205163.1 392373330 13097765 complement(197195..197440) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 197440 13097765 DAMO_0216 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205163.1 197195 R 671143 CDS YP_003205164.1 392373331 13097766 197997..199190 1 NC_013260.1 ATPase (AAA+ superfamily)-like protein 199190 13097766 DAMO_0217 Candidatus Methylomirabilis oxyfera ATPase (AAA+ superfamily)-like protein YP_003205164.1 197997 D 671143 CDS YP_003205165.1 392373332 13097767 complement(199407..200729) 1 NC_013260.1 UDP-glucose/GDP-mannose dehydrogenase 200729 13097767 DAMO_0218 Candidatus Methylomirabilis oxyfera UDP-glucose/GDP-mannose dehydrogenase YP_003205165.1 199407 R 671143 CDS YP_003205166.1 392373333 13097768 201089..201649 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 201649 13097768 DAMO_0219 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205166.1 201089 D 671143 CDS YP_003205167.1 392373334 13097769 complement(201684..202613) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 202613 13097769 DAMO_0220 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205167.1 201684 R 671143 CDS YP_003205168.1 392373335 13097770 202881..204662 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 204662 13097770 DAMO_0221 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205168.1 202881 D 671143 CDS YP_003205169.1 392373336 13097771 205175..206698 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 206698 13097771 DAMO_0223 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205169.1 205175 D 671143 CDS YP_003205170.1 392373337 13097772 206695..207450 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 207450 13097772 DAMO_0224 Candidatus Methylomirabilis oxyfera membrane protein YP_003205170.1 206695 D 671143 CDS YP_003205171.1 392373338 13097773 207501..208631 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 208631 13097773 DAMO_0225 Candidatus Methylomirabilis oxyfera membrane protein YP_003205171.1 207501 D 671143 CDS YP_003205172.1 392373339 13097774 208628..209569 1 NC_013260.1 hypothetical protein 209569 13097774 DAMO_0226 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205172.1 208628 D 671143 CDS YP_003205173.1 392373340 13097775 209852..210202 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; restriction endonuclease-like 210202 13097775 DAMO_0227 Candidatus Methylomirabilis oxyfera restriction endonuclease-like YP_003205173.1 209852 D 671143 CDS YP_003205174.1 392373341 13097776 complement(210370..211017) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 211017 13097776 DAMO_0229 Candidatus Methylomirabilis oxyfera membrane protein YP_003205174.1 210370 R 671143 CDS YP_003205175.1 392373342 13097777 complement(210995..211513) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 211513 13097777 DAMO_0230 Candidatus Methylomirabilis oxyfera membrane protein YP_003205175.1 210995 R 671143 CDS YP_003205176.1 392373343 13097778 211516..211686 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 211686 13097778 DAMO_0231 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205176.1 211516 D 671143 CDS YP_003205177.1 392373344 13097779 211772..212941 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 212941 13097779 DAMO_0232 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205177.1 211772 D 671143 CDS YP_003205178.1 392373345 13097780 213224..213796 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 213796 13097780 DAMO_0233 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205178.1 213224 D 671143 CDS YP_003205179.1 392373346 13097781 214084..215466 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 215466 13097781 DAMO_0235 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205179.1 214084 D 671143 CDS YP_003205180.1 392373347 13097782 215612..215785 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 215785 13097782 DAMO_0236 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205180.1 215612 D 671143 CDS YP_003205181.1 392373348 13097783 215848..216063 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 216063 13097783 DAMO_0237 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205181.1 215848 D 671143 CDS YP_003205182.1 392373349 13097784 complement(216116..216496) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 216496 13097784 DAMO_0238 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205182.1 216116 R 671143 CDS YP_003205183.1 392373350 13097785 complement(216493..216819) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; DNA polymerase, beta-like region 216819 13097785 DAMO_0239 Candidatus Methylomirabilis oxyfera DNA polymerase, beta-like region YP_003205183.1 216493 R 671143 CDS YP_003205184.1 392373351 13097786 complement(216852..217082) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 217082 13097786 DAMO_0240 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205184.1 216852 R 671143 CDS YP_003205185.1 392373352 13097787 217039..217236 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 217236 13097787 DAMO_0241 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205185.1 217039 D 671143 CDS YP_003205186.1 392373353 13097788 complement(217263..217862) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 217862 13097788 DAMO_0242 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205186.1 217263 R 671143 CDS YP_003205187.1 392373354 13097789 217998..218102 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 218102 13097789 DAMO_0244 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205187.1 217998 D 671143 CDS YP_003205188.1 392373355 13097790 218238..218936 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 218936 13097790 DAMO_0245 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205188.1 218238 D 671143 CDS YP_003205189.1 392373356 13097791 219043..219963 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 219963 13097791 DAMO_0246 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205189.1 219043 D 671143 CDS YP_003205190.1 392373357 13097792 219987..221150 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 221150 13097792 DAMO_0247 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205190.1 219987 D 671143 CDS YP_003205191.1 392373358 13097887 221380..221601 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 221601 13097887 DAMO_0248 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205191.1 221380 D 671143 CDS YP_003205192.1 392373359 13097888 221650..222801 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase family 2 222801 13097888 DAMO_0249 Candidatus Methylomirabilis oxyfera Glycosyl transferase family 2 YP_003205192.1 221650 D 671143 CDS YP_003205193.1 392373360 13097889 complement(222695..224326) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 224326 13097889 DAMO_0250 Candidatus Methylomirabilis oxyfera membrane protein YP_003205193.1 222695 R 671143 CDS YP_003205194.1 392373361 13097890 224503..225294 1 NC_013260.1 ABC transporter permease 225294 13097890 DAMO_0251 Candidatus Methylomirabilis oxyfera ABC transporter permease YP_003205194.1 224503 D 671143 CDS YP_003205195.1 392373362 13097891 225294..226562 1 NC_013260.1 Wzt 226562 wzt 13097891 wzt Candidatus Methylomirabilis oxyfera Wzt YP_003205195.1 225294 D 671143 CDS YP_003205196.1 392373363 13097892 226713..227726 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 227726 13097892 DAMO_0253 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205196.1 226713 D 671143 CDS YP_003205197.1 392373364 13097893 227760..228422 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 228422 13097893 DAMO_0254 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205197.1 227760 D 671143 CDS YP_003205198.1 392373365 13097894 228429..232811 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 232811 13097894 DAMO_0255 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205198.1 228429 D 671143 CDS YP_003205199.1 392373366 13097895 232839..234149 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 234149 13097895 DAMO_0256 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205199.1 232839 D 671143 CDS YP_003205200.1 392373367 13097896 234265..235170 1 NC_013260.1 hypothetical protein 235170 13097896 DAMO_0257 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205200.1 234265 D 671143 CDS YP_003205201.1 392373368 13097897 235250..237244 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 237244 13097897 DAMO_0258 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205201.1 235250 D 671143 CDS YP_003205202.1 392373369 13097898 237338..238204 1 NC_013260.1 Spore coat polysaccharide biosynthesis protein spsK 238204 spsK 13097898 spsK Candidatus Methylomirabilis oxyfera Spore coat polysaccharide biosynthesis protein spsK YP_003205202.1 237338 D 671143 CDS YP_003205203.1 392373370 13097899 238275..238523 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; CopG family transcriptional regulator 238523 13097899 DAMO_0260 Candidatus Methylomirabilis oxyfera CopG family transcriptional regulator YP_003205203.1 238275 D 671143 CDS YP_003205204.1 392373371 13098885 238514..238924 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 238924 13098885 DAMO_0261 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205204.1 238514 D 671143 CDS YP_003205205.1 392373372 13097900 238951..239943 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase, family 2 239943 13097900 DAMO_0262 Candidatus Methylomirabilis oxyfera Glycosyl transferase, family 2 YP_003205205.1 238951 D 671143 CDS YP_003205206.1 392373373 13097901 239948..241177 1 NC_013260.1 glycosyltransferase 241177 13097901 DAMO_0263 Candidatus Methylomirabilis oxyfera glycosyltransferase YP_003205206.1 239948 D 671143 CDS YP_003205207.1 392373374 13097902 241171..242574 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; capsular polysaccharide synthesis protein (cpsA) 242574 13097902 DAMO_0264 Candidatus Methylomirabilis oxyfera capsular polysaccharide synthesis protein (cpsA) YP_003205207.1 241171 D 671143 CDS YP_003205208.1 392373375 13097903 242670..243590 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1787800, 8611559; Product type e : enzyme; UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) 243590 galE 13097903 galE Candidatus Methylomirabilis oxyfera UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) YP_003205208.1 242670 D 671143 CDS YP_003205209.1 392373376 13097904 243714..244673 1 NC_013260.1 PfkB domain-containing protein 244673 13097904 DAMO_0267 Candidatus Methylomirabilis oxyfera PfkB domain-containing protein YP_003205209.1 243714 D 671143 CDS YP_003205210.1 392373377 13097905 244783..246390 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11500486, 15182359; Product type e : enzyme; CTP synthase (CTP synthetase) 246390 pyrG 13097905 pyrG Candidatus Methylomirabilis oxyfera CTP synthase (CTP synthetase) YP_003205210.1 244783 D 671143 CDS YP_003205211.1 392373378 13098820 246446..247285 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10220877, 12955602; Product type e : enzyme; 2-dehydro-3-deoxyphosphooctonate aldolase (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase; KDO-8-phosphate synthetase, KDOPS) 247285 kdsA 13098820 kdsA Candidatus Methylomirabilis oxyfera 2-dehydro-3-deoxyphosphooctonate aldolase (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase; KDO-8-phosphate synthetase, KDOPS) YP_003205211.1 246446 D 671143 CDS YP_003205212.1 392373379 13097906 247397..249223 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type t : transporter; ABC transporter (permease and ATP-binding protein) 249223 13097906 DAMO_0270 Candidatus Methylomirabilis oxyfera ABC transporter (permease and ATP-binding protein) YP_003205212.1 247397 D 671143 CDS YP_003205213.1 392373380 13097907 249210..250289 1 NC_013260.1 glucosyl-transferase 250289 13097907 DAMO_0271 Candidatus Methylomirabilis oxyfera glucosyl-transferase YP_003205213.1 249210 D 671143 CDS YP_003205214.1 392373381 13097908 250286..252610 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 252610 13097908 DAMO_0272 Candidatus Methylomirabilis oxyfera membrane protein YP_003205214.1 250286 D 671143 CDS YP_003205215.1 392373382 13097909 252607..253566 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11956197; Product type e : enzyme; arabinose 5-phosphate isomerase 253566 kpsF 13097909 kpsF Candidatus Methylomirabilis oxyfera arabinose 5-phosphate isomerase YP_003205215.1 252607 D 671143 CDS YP_003205216.1 392373383 13097910 253665..255275 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 255275 13097910 DAMO_0274 Candidatus Methylomirabilis oxyfera membrane protein YP_003205216.1 253665 D 671143 CDS YP_003205217.1 392373384 13100234 255452..256048 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12639950; Product type e : enzyme; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 256048 kdsC 13100234 kdsC Candidatus Methylomirabilis oxyfera 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_003205217.1 255452 D 671143 CDS YP_003205218.1 392373385 13097911 256134..257291 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; methionine adenosyltransferase 257291 metK 13097911 metK Candidatus Methylomirabilis oxyfera methionine adenosyltransferase YP_003205218.1 256134 D 671143 CDS YP_003205219.1 392373386 13098703 257299..257970 1 NC_013260.1 peptidylprolyl isomerase 257970 13098703 DAMO_0277 Candidatus Methylomirabilis oxyfera peptidylprolyl isomerase YP_003205219.1 257299 D 671143 CDS YP_003205220.1 392373387 13098489 complement(258236..258424) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 258424 13098489 DAMO_0278 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205220.1 258236 R 671143 CDS YP_003205221.1 392373388 13097912 complement(258724..259053) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 259053 13097912 DAMO_0279 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205221.1 258724 R 671143 CDS YP_003205222.1 392373389 13097913 complement(259268..259678) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 259678 13097913 DAMO_0280 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205222.1 259268 R 671143 CDS YP_003205223.1 392373390 13097914 complement(259815..260129) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 260129 13097914 DAMO_0282 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205223.1 259815 R 671143 CDS YP_003205224.1 392373391 13098495 260573..260935 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 260935 13098495 DAMO_0284 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205224.1 260573 D 671143 CDS YP_003205225.1 392373392 13097915 261018..261299 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 261299 13097915 DAMO_0285 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205225.1 261018 D 671143 CDS YP_003205226.1 392373393 13098491 complement(261773..261928) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 261928 13098491 DAMO_0286 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205226.1 261773 R 671143 CDS YP_003205227.1 392373394 13098538 complement(261941..263383) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) 263383 ahcY 13098538 ahcY Candidatus Methylomirabilis oxyfera adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) YP_003205227.1 261941 R 671143 CDS YP_003205228.1 392373395 13097916 263561..263743 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 263743 13097916 DAMO_0290 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205228.1 263561 D 671143 CDS YP_003205229.1 392373396 13097917 263751..265598 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 265598 13097917 DAMO_0292 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205229.1 263751 D 671143 CDS YP_003205230.1 392373397 13097918 265622..267202 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase 267202 13097918 DAMO_0293 Candidatus Methylomirabilis oxyfera Glycosyl transferase YP_003205230.1 265622 D 671143 CDS YP_003205231.1 392373398 13097919 267237..269237 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 269237 13097919 DAMO_0294 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205231.1 267237 D 671143 CDS YP_003205232.1 392373399 13097920 269296..270759 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase family 2 270759 13097920 DAMO_0295 Candidatus Methylomirabilis oxyfera Glycosyl transferase family 2 YP_003205232.1 269296 D 671143 CDS YP_003205233.1 392373400 13097921 270892..271791 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 271791 13097921 DAMO_0296 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205233.1 270892 D 671143 CDS YP_003205234.1 392373401 13097922 271891..274023 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 274023 13097922 DAMO_0297 Candidatus Methylomirabilis oxyfera membrane protein YP_003205234.1 271891 D 671143 CDS YP_003205235.1 392373402 13097923 274090..274431 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 274431 13097923 DAMO_0298 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205235.1 274090 D 671143 CDS YP_003205236.1 392373403 13099896 274646..275683 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell wall or antigenic protein (fragment); putative signal peptide 275683 13099896 DAMO_0299 Candidatus Methylomirabilis oxyfera cell wall or antigenic protein (fragment); putative signal peptide YP_003205236.1 274646 D 671143 CDS YP_003205237.1 392373404 13097924 275832..276866 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Collagen triple helix repeat 276866 13097924 DAMO_0300 Candidatus Methylomirabilis oxyfera Collagen triple helix repeat YP_003205237.1 275832 D 671143 CDS YP_003205238.1 392373405 13097925 276967..278889 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 278889 13097925 DAMO_0301 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205238.1 276967 D 671143 CDS YP_003205239.1 392373406 13097926 279060..279815 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 279815 13097926 DAMO_0302 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205239.1 279060 D 671143 CDS YP_003205240.1 392373407 13097927 complement(280051..281019) 1 NC_013260.1 glycosyltransferase 281019 13097927 DAMO_0303 Candidatus Methylomirabilis oxyfera glycosyltransferase YP_003205240.1 280051 R 671143 CDS YP_003205241.1 392373408 13097928 complement(281025..283124) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 283124 13097928 DAMO_0304 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205241.1 281025 R 671143 CDS YP_003205242.1 392373409 13097929 complement(283289..283474) 1 NC_013260.1 hypothetical protein 283474 13097929 DAMO_0306 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205242.1 283289 R 671143 CDS YP_003205243.1 392373410 13097930 complement(283293..283439) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 283439 13097930 DAMO_0307 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205243.1 283293 R 671143 CDS YP_003205244.1 392373411 13097931 283626..284576 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 284576 13097931 DAMO_0308 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205244.1 283626 D 671143 CDS YP_003205245.1 392373412 13097932 284671..285645 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 285645 13097932 DAMO_0309 Candidatus Methylomirabilis oxyfera membrane protein YP_003205245.1 284671 D 671143 CDS YP_003205246.1 392373413 13097933 285780..287141 1 NC_013260.1 radical SAM protein 287141 13097933 DAMO_0310 Candidatus Methylomirabilis oxyfera radical SAM protein YP_003205246.1 285780 D 671143 CDS YP_003205247.1 392373414 13097934 287154..287906 1 NC_013260.1 glycosyl transferase 287906 13097934 DAMO_0311 Candidatus Methylomirabilis oxyfera glycosyl transferase YP_003205247.1 287154 D 671143 CDS YP_003205248.1 392373415 13097935 288770..289690 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 289690 13097935 DAMO_0312 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205248.1 288770 D 671143 CDS YP_003205249.1 392373416 13097936 289723..290457 1 NC_013260.1 glycosyl transferase 290457 13097936 DAMO_0313 Candidatus Methylomirabilis oxyfera glycosyl transferase YP_003205249.1 289723 D 671143 CDS YP_003205250.1 392373417 13097937 complement(290535..291623) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Permease YjgP/YjgQ 291623 13097937 DAMO_0314 Candidatus Methylomirabilis oxyfera Permease YjgP/YjgQ YP_003205250.1 290535 R 671143 CDS YP_003205251.1 392373418 13097938 complement(291631..292911) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Permease YjgP/YjgQ family protein 292911 13097938 DAMO_0315 Candidatus Methylomirabilis oxyfera Permease YjgP/YjgQ family protein YP_003205251.1 291631 R 671143 CDS YP_003205252.1 392373419 13097939 293028..293993 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 293993 13097939 DAMO_0316 Candidatus Methylomirabilis oxyfera membrane protein YP_003205252.1 293028 D 671143 CDS YP_003205253.1 392373420 13097940 294132..295817 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 295817 13097940 DAMO_0317 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205253.1 294132 D 671143 CDS YP_003205254.1 392373421 13097941 complement(295814..296254) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 296254 13097941 DAMO_0318 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205254.1 295814 R 671143 CDS YP_003205255.1 392373422 13097942 296452..298956 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Metallo-beta-lactamase superfamily 298956 13097942 DAMO_0319 Candidatus Methylomirabilis oxyfera Metallo-beta-lactamase superfamily YP_003205255.1 296452 D 671143 CDS YP_003205256.1 392373423 13097943 298972..299109 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 299109 13097943 DAMO_0320 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205256.1 298972 D 671143 CDS YP_003205257.1 392373424 13097944 299119..300360 1 NC_013260.1 Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) 300360 xseA 13097944 xseA Candidatus Methylomirabilis oxyfera Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) YP_003205257.1 299119 D 671143 CDS YP_003205258.1 392373425 13097945 300368..300631 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; exodeoxyribonuclease small subunit 300631 13097945 DAMO_0322 Candidatus Methylomirabilis oxyfera exodeoxyribonuclease small subunit YP_003205258.1 300368 D 671143 CDS YP_003205259.1 392373426 13097946 300642..301580 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 2089044; Product type pe : putative enzyme; Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) 301580 13097946 DAMO_0323 Candidatus Methylomirabilis oxyfera Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) YP_003205259.1 300642 D 671143 CDS YP_003205260.1 392373427 13097947 301608..302492 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; rRNA methylase 302492 13097947 DAMO_0324 Candidatus Methylomirabilis oxyfera rRNA methylase YP_003205260.1 301608 D 671143 CDS YP_003205261.1 392373428 13097948 302515..303369 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) 303369 13097948 DAMO_0325 Candidatus Methylomirabilis oxyfera inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)(ppnK) YP_003205261.1 302515 D 671143 CDS YP_003205262.1 392373429 13097949 303373..305088 1 NC_013260.1 DNA repair protein recN (Recombination protein N) 305088 recN 13097949 recN Candidatus Methylomirabilis oxyfera DNA repair protein recN (Recombination protein N) YP_003205262.1 303373 D 671143 CDS YP_003205263.1 392373430 13097950 305202..305513 1 NC_013260.1 50S ribosomal protein L21 305513 rplU 13097950 rplU Candidatus Methylomirabilis oxyfera 50S ribosomal protein L21 YP_003205263.1 305202 D 671143 CDS YP_003205264.1 392373431 13097951 305603..305857 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10094780, 1225626; Product type s : structure; 50S ribosomal protein L27 305857 rpmA 13097951 rpmA Candidatus Methylomirabilis oxyfera 50S ribosomal protein L27 YP_003205264.1 305603 D 671143 CDS YP_003205265.1 392373432 13097952 305946..307007 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type ph : phenotype; GTP-binding protein 307007 obgE 13097952 obgE Candidatus Methylomirabilis oxyfera GTP-binding protein YP_003205265.1 305946 D 671143 CDS YP_003205266.1 392373433 13098888 307046..308197 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; gamma-glutamyl kinase 308197 proB 13098888 proB Candidatus Methylomirabilis oxyfera gamma-glutamyl kinase YP_003205266.1 307046 D 671143 CDS YP_003205267.1 392373434 13097953 308310..309572 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; gamma-glutamylphosphate reductase 309572 proA 13097953 proA Candidatus Methylomirabilis oxyfera gamma-glutamylphosphate reductase YP_003205267.1 308310 D 671143 CDS YP_003205268.1 392373435 13097954 309656..310348 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) 310348 nadD 13097954 nadD Candidatus Methylomirabilis oxyfera nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) YP_003205268.1 309656 D 671143 CDS YP_003205269.1 392373436 13097955 310353..310787 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 310787 13097955 DAMO_0334 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205269.1 310353 D 671143 CDS YP_003205270.1 392373437 13097956 311028..311381 1 NC_013260.1 transcriptional regulators, TraR/DksA family 311381 13097956 DAMO_0335 Candidatus Methylomirabilis oxyfera transcriptional regulators, TraR/DksA family YP_003205270.1 311028 D 671143 CDS YP_003205271.1 392373438 13098717 311618..312115 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 312115 13098717 DAMO_0337 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205271.1 311618 D 671143 CDS YP_003205272.1 392373439 13098760 complement(311636..312154) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 312154 13098760 DAMO_0336 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205272.1 311636 R 671143 CDS YP_003205273.1 392373440 13098765 complement(312436..312816) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 312816 13098765 DAMO_0338 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205273.1 312436 R 671143 CDS YP_003205274.1 392373441 13098627 312864..313865 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glyceraldehyde-3-phosphate dehydrogenase 313865 cbbG 13098627 cbbG Candidatus Methylomirabilis oxyfera glyceraldehyde-3-phosphate dehydrogenase YP_003205274.1 312864 D 671143 CDS YP_003205275.1 392373442 13098677 313964..314347 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; phosphoglycerate kinase, partial 5' end 314347 cbbK 13098677 cbbK Candidatus Methylomirabilis oxyfera phosphoglycerate kinase, partial 5' end YP_003205275.1 313964 D 671143 CDS YP_003205276.1 392373443 13098676 314304..315152 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; phosphoglycerate kinase, partial 3' end 315152 cbbK 13098676 cbbK Candidatus Methylomirabilis oxyfera phosphoglycerate kinase, partial 3' end YP_003205276.1 314304 D 671143 CDS YP_003205277.1 392373444 13098587 315255..316013 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; triosephosphate isomerase (TIM) (Triose-phosphate isomerase) 316013 tpiA 13098587 tpiA Candidatus Methylomirabilis oxyfera triosephosphate isomerase (TIM) (Triose-phosphate isomerase) YP_003205277.1 315255 D 671143 CDS YP_003205278.1 392373445 13097957 316111..316482 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8253068; Product type pt : putative transporter; Protein-export membrane protein, secG-like 316482 13097957 DAMO_0343 Candidatus Methylomirabilis oxyfera Protein-export membrane protein, secG-like YP_003205278.1 316111 D 671143 CDS YP_003205279.1 392373446 13097958 316492..316824 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 316824 13097958 DAMO_0345 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205279.1 316492 D 671143 CDS YP_003205280.1 392373447 13097960 316814..318607 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 318607 13097960 DAMO_0346 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205280.1 316814 D 671143 CDS YP_003205281.1 392373448 13097959 318653..319792 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 319792 13097959 DAMO_0347 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205281.1 318653 D 671143 CDS YP_003205282.1 392373449 13097961 319792..321108 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 321108 13097961 DAMO_0348 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205282.1 319792 D 671143 CDS YP_003205283.1 392373450 13100026 321207..321845 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 321845 13100026 DAMO_0349 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205283.1 321207 D 671143 CDS YP_003205284.1 392373451 13100028 321842..322723 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 322723 13100028 DAMO_0350 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205284.1 321842 D 671143 CDS YP_003205285.1 392373452 13100029 322723..323490 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 323490 13100029 DAMO_0351 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205285.1 322723 D 671143 CDS YP_003205286.1 392373453 13098855 323926..324042 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 324042 13098855 DAMO_0353 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205286.1 323926 D 671143 CDS YP_003205287.1 392373454 13097962 324039..324260 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 324260 13097962 DAMO_0354 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205287.1 324039 D 671143 CDS YP_003205288.1 392373455 13097963 324267..324506 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 324506 13097963 DAMO_0355 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205288.1 324267 D 671143 CDS YP_003205289.1 392373456 13097964 324548..324688 1 NC_013260.1 hypothetical protein 324688 13097964 DAMO_0356 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205289.1 324548 D 671143 CDS YP_003205290.1 392373457 13097965 324688..325989 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 325989 13097965 DAMO_0357 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205290.1 324688 D 671143 CDS YP_003205291.1 392373458 13097966 complement(326116..326319) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 326319 13097966 DAMO_0358 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205291.1 326116 R 671143 CDS YP_003205292.1 392373459 13097967 326318..326491 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 326491 13097967 DAMO_0359 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205292.1 326318 D 671143 CDS YP_003205293.1 392373460 13097968 326614..327861 1 NC_013260.1 AAA ATPase 327861 13097968 DAMO_0360 Candidatus Methylomirabilis oxyfera AAA ATPase YP_003205293.1 326614 D 671143 CDS YP_003205294.1 392373461 13097969 328085..328537 1 NC_013260.1 OsmC family protein 328537 13097969 DAMO_0361 Candidatus Methylomirabilis oxyfera OsmC family protein YP_003205294.1 328085 D 671143 CDS YP_003205295.1 392373462 13097970 328587..329468 1 NC_013260.1 Dyp-type peroxidase 329468 13097970 DAMO_0362 Candidatus Methylomirabilis oxyfera Dyp-type peroxidase YP_003205295.1 328587 D 671143 CDS YP_003205296.1 392373463 13097971 329561..329803 1 NC_013260.1 prevent-host-death family protein 329803 13097971 DAMO_0363 Candidatus Methylomirabilis oxyfera prevent-host-death family protein YP_003205296.1 329561 D 671143 CDS YP_003205297.1 392373464 13097972 329797..330063 1 NC_013260.1 addiction module toxin, Txe/YoeB family 330063 13097972 DAMO_0364 Candidatus Methylomirabilis oxyfera addiction module toxin, Txe/YoeB family YP_003205297.1 329797 D 671143 CDS YP_003205298.1 392373465 13097973 330602..330820 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 330820 13097973 DAMO_0367 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205298.1 330602 D 671143 CDS YP_003205299.1 392373466 13097974 331100..332083 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 332083 13097974 DAMO_0369 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205299.1 331100 D 671143 CDS YP_003205300.1 392373467 13097975 332182..332763 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 3-hydroxydecanoyl-ACP dehydratase 332763 13097975 DAMO_0371 Candidatus Methylomirabilis oxyfera 3-hydroxydecanoyl-ACP dehydratase YP_003205300.1 332182 D 671143 CDS YP_003205301.1 392373468 13097976 332760..333065 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 333065 13097976 DAMO_0372 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205301.1 332760 D 671143 CDS YP_003205302.1 392373469 13097977 333098..333418 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 333418 13097977 DAMO_0373 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205302.1 333098 D 671143 CDS YP_003205303.1 392373470 13097978 333415..334266 1 NC_013260.1 transposase 334266 13097978 DAMO_0374 Candidatus Methylomirabilis oxyfera transposase YP_003205303.1 333415 D 671143 CDS YP_003205304.1 392373471 13097979 complement(334304..334408) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 334408 13097979 DAMO_0375 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205304.1 334304 R 671143 CDS YP_003205305.1 392373472 13097980 complement(334427..334666) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 334666 13097980 DAMO_0376 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205305.1 334427 R 671143 CDS YP_003205306.1 392373473 13097981 334953..335522 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 335522 13097981 DAMO_0377 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205306.1 334953 D 671143 CDS YP_003205307.1 392373474 13097982 complement(335481..335747) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 335747 13097982 DAMO_0378 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205307.1 335481 R 671143 CDS YP_003205308.1 392373475 13097983 335842..336126 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 336126 13097983 DAMO_0379 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205308.1 335842 D 671143 CDS YP_003205309.1 392373476 13097984 336119..336379 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 336379 13097984 DAMO_0380 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205309.1 336119 D 671143 CDS YP_003205310.1 392373477 13097985 complement(336444..336731) 1 NC_013260.1 transcriptional regulator, XRE family protein 336731 13097985 DAMO_0381 Candidatus Methylomirabilis oxyfera transcriptional regulator, XRE family protein YP_003205310.1 336444 R 671143 CDS YP_003205311.1 392373478 13097986 complement(336741..337022) 1 NC_013260.1 Plasmid maintenance system killer 337022 13097986 DAMO_0382 Candidatus Methylomirabilis oxyfera Plasmid maintenance system killer YP_003205311.1 336741 R 671143 CDS YP_003205312.1 392373479 13097987 337217..338206 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 338206 13097987 DAMO_0383 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205312.1 337217 D 671143 CDS YP_003205313.1 392373480 13097988 complement(338175..338492) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 338492 13097988 DAMO_0384 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205313.1 338175 R 671143 CDS YP_003205314.1 392373481 13097989 complement(338709..338798) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 338798 13097989 DAMO_0385 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205314.1 338709 R 671143 CDS YP_003205315.1 392373482 13098955 complement(338808..340736) 1 NC_013260.1 aconitate hydratase 340736 13098955 DAMO_0386 Candidatus Methylomirabilis oxyfera aconitate hydratase YP_003205315.1 338808 R 671143 CDS YP_003205316.1 392373483 13098956 complement(340893..340964) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 340964 13098956 DAMO_0387 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205316.1 340893 R 671143 CDS YP_003205317.1 392373484 13098957 341229..341573 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 341573 13098957 DAMO_0388 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205317.1 341229 D 671143 CDS YP_003205318.1 392373485 13098958 341608..341970 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; integron gene cassette protein 341970 13098958 DAMO_0389 Candidatus Methylomirabilis oxyfera integron gene cassette protein YP_003205318.1 341608 D 671143 CDS YP_003205319.1 392373486 13098959 342132..343343 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12045089, 14592985; Product type e : enzyme; DNA polymerase IV, devoid of proofreading, damage-inducible protein P 343343 dinB 13098959 dinB Candidatus Methylomirabilis oxyfera DNA polymerase IV, devoid of proofreading, damage-inducible protein P YP_003205319.1 342132 D 671143 CDS YP_003205320.1 392373487 13098960 complement(343365..343889) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 343889 13098960 DAMO_0391 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205320.1 343365 R 671143 CDS YP_003205321.1 392373488 13098961 complement(343849..344229) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; DNA-binding protein 344229 13098961 DAMO_0392 Candidatus Methylomirabilis oxyfera DNA-binding protein YP_003205321.1 343849 R 671143 CDS YP_003205322.1 392373489 13098962 complement(344238..346493) 1 NC_013260.1 Helicase, RecD/TraA family 346493 13098962 DAMO_0393 Candidatus Methylomirabilis oxyfera Helicase, RecD/TraA family YP_003205322.1 344238 R 671143 CDS YP_003205323.1 392373490 13098963 complement(346519..346722) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 346722 13098963 DAMO_0394 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205323.1 346519 R 671143 CDS YP_003205324.1 392373491 13098964 complement(346861..347463) 1 NC_013260.1 Superoxide dismutase 347463 13098964 DAMO_0395 Candidatus Methylomirabilis oxyfera Superoxide dismutase YP_003205324.1 346861 R 671143 CDS YP_003205325.1 392373492 13098965 complement(347647..349515) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3027506; Product type e : enzyme; ATP-dependent DNA helicase RecQ 349515 recQ 13098965 recQ Candidatus Methylomirabilis oxyfera ATP-dependent DNA helicase RecQ YP_003205325.1 347647 R 671143 CDS YP_003205326.1 392373493 13098966 349651..349848 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 349848 13098966 DAMO_0397 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205326.1 349651 D 671143 CDS YP_003205327.1 392373494 13098967 349919..350512 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 350512 13098967 DAMO_0398 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205327.1 349919 D 671143 CDS YP_003205328.1 392373495 13100082 350526..350846 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 350846 13100082 DAMO_0399 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205328.1 350526 D 671143 CDS YP_003205329.1 392373496 13098968 350982..351485 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 351485 13098968 DAMO_0400 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205329.1 350982 D 671143 CDS YP_003205330.1 392373497 13098969 351485..352489 1 NC_013260.1 integrase, catalytic region 352489 13098969 DAMO_0401 Candidatus Methylomirabilis oxyfera integrase, catalytic region YP_003205330.1 351485 D 671143 CDS YP_003205331.1 392373498 13098970 352594..352863 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 352863 13098970 DAMO_0402 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205331.1 352594 D 671143 CDS YP_003205332.1 392373499 13098971 complement(352897..353808) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 353808 13098971 DAMO_0403 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205332.1 352897 R 671143 CDS YP_003205333.1 392373500 13098972 complement(353811..355061) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Selenium-binding protein 355061 13098972 DAMO_0405 Candidatus Methylomirabilis oxyfera Selenium-binding protein YP_003205333.1 353811 R 671143 CDS YP_003205334.1 392373501 13098718 355372..357312 1 NC_013260.1 amino acid permease-associated region 357312 13098718 DAMO_0407 Candidatus Methylomirabilis oxyfera amino acid permease-associated region YP_003205334.1 355372 D 671143 CDS YP_003205335.1 392373502 13098973 357337..357420 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 357420 13098973 DAMO_0408 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205335.1 357337 D 671143 CDS YP_003205336.1 392373503 13098974 357430..357522 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 357522 13098974 DAMO_0409 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205336.1 357430 D 671143 CDS YP_003205337.1 392373504 13098975 357519..359324 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15292155; Product type t : transporter; high-affinity potassium transport system P-type ATPase, , A chain 359324 kdpA 13098975 kdpA Candidatus Methylomirabilis oxyfera high-affinity potassium transport system P-type ATPase, , A chain YP_003205337.1 357519 D 671143 CDS YP_003205338.1 392373505 13098978 361446..362018 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11248697; Product type t : transporter; P-type ATPase subunit high-affinity potassium transport system subunit C 362018 kdpC 13098978 kdpC Candidatus Methylomirabilis oxyfera P-type ATPase subunit high-affinity potassium transport system subunit C YP_003205338.1 361446 D 671143 CDS YP_003205339.1 392373506 13098979 362057..364759 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 14534307; Product type r : regulator; sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation 364759 kdpD 13098979 kdpD Candidatus Methylomirabilis oxyfera sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation YP_003205339.1 362057 D 671143 CDS YP_003205340.1 392373507 13098980 364752..365513 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14534307, 1532388; Product type r : regulator; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) 365513 kdpE 13098980 kdpE Candidatus Methylomirabilis oxyfera response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) YP_003205340.1 364752 D 671143 CDS YP_003205341.1 392373508 13098981 complement(365679..368507) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 368507 13098981 DAMO_0416 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003205341.1 365679 R 671143 CDS YP_003205342.1 392373509 13098982 368555..368806 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 368806 13098982 DAMO_0417 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205342.1 368555 D 671143 CDS YP_003205343.1 392373510 13098983 369041..369262 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 369262 13098983 DAMO_0418 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205343.1 369041 D 671143 CDS YP_003205344.1 392373511 13098483 complement(369291..370223) 1 NC_013260.1 aminopeptidase 370223 13098483 DAMO_0419 Candidatus Methylomirabilis oxyfera aminopeptidase YP_003205344.1 369291 R 671143 CDS YP_003205345.1 392373512 13098484 370366..370701 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 370701 13098484 DAMO_0420 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205345.1 370366 D 671143 CDS YP_003205346.1 392373513 13098485 370957..372396 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 1931833, 8037924; Product type pe : putative enzyme; ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene) 372396 13098485 DAMO_0421 Candidatus Methylomirabilis oxyfera ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene) YP_003205346.1 370957 D 671143 CDS YP_003205347.1 392373514 13098486 complement(372583..372768) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 372768 13098486 DAMO_0422 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205347.1 372583 R 671143 CDS YP_003205348.1 392373515 13098487 complement(372790..372957) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 372957 13098487 DAMO_0423 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205348.1 372790 R 671143 CDS YP_003205349.1 392373516 13098488 373222..373839 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 373839 13098488 DAMO_0425 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205349.1 373222 D 671143 CDS YP_003205350.1 392373517 13098984 374244..374576 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 374576 13098984 DAMO_0428 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205350.1 374244 D 671143 CDS YP_003205351.1 392373518 13098985 374595..374786 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 374786 13098985 DAMO_0429 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205351.1 374595 D 671143 CDS YP_003205352.1 392373519 13098986 complement(374717..374914) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 374914 13098986 DAMO_0430 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205352.1 374717 R 671143 CDS YP_003205353.1 392373520 13098987 375586..376239 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 376239 13098987 DAMO_0431 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205353.1 375586 D 671143 CDS YP_003205354.1 392373521 13098988 376255..376806 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 376806 13098988 DAMO_0432 Candidatus Methylomirabilis oxyfera membrane protein YP_003205354.1 376255 D 671143 CDS YP_003205355.1 392373522 13098989 376821..377651 1 NC_013260.1 DNA-methyltransferase 377651 13098989 DAMO_0433 Candidatus Methylomirabilis oxyfera DNA-methyltransferase YP_003205355.1 376821 D 671143 CDS YP_003205356.1 392373523 13098990 377665..380310 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 380310 13098990 DAMO_0434 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205356.1 377665 D 671143 CDS YP_003205357.1 392373524 13098991 380330..380506 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 380506 13098991 DAMO_0435 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205357.1 380330 D 671143 CDS YP_003205358.1 392373525 13098992 380580..381104 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 381104 13098992 DAMO_0437 Candidatus Methylomirabilis oxyfera membrane protein YP_003205358.1 380580 D 671143 CDS YP_003205359.1 392373526 13098993 complement(381306..381614) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 381614 13098993 DAMO_0438 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205359.1 381306 R 671143 CDS YP_003205360.1 392373527 13098994 complement(381724..382056) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 382056 13098994 DAMO_0439 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205360.1 381724 R 671143 CDS YP_003205361.1 392373528 13098995 complement(382040..382351) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 382351 13098995 DAMO_0440 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205361.1 382040 R 671143 CDS YP_003205362.1 392373529 13098997 complement(382723..383463) 1 NC_013260.1 Lipoprotein ylpA 383463 ylpA 13098997 ylpA Candidatus Methylomirabilis oxyfera Lipoprotein ylpA YP_003205362.1 382723 R 671143 CDS YP_003205363.1 392373530 13098998 complement(383537..384163) 1 NC_013260.1 orotate phosphoribosyltransferase 384163 pyrE 13098998 pyrE Candidatus Methylomirabilis oxyfera orotate phosphoribosyltransferase YP_003205363.1 383537 R 671143 CDS YP_003205364.1 392373531 13098999 complement(384217..384657) 1 NC_013260.1 peptide methionine sulfoxide reductase msrA (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) 384657 msrA 13098999 msrA Candidatus Methylomirabilis oxyfera peptide methionine sulfoxide reductase msrA (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) YP_003205364.1 384217 R 671143 CDS YP_003205365.1 392373532 13099000 complement(384671..385486) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 385486 13099000 DAMO_0444 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205365.1 384671 R 671143 CDS YP_003205366.1 392373533 13099001 complement(385483..386157) 1 NC_013260.1 hypothetical protein 386157 13099001 DAMO_0445 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205366.1 385483 R 671143 CDS YP_003205367.1 392373534 13099002 complement(386154..386846) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 386846 13099002 DAMO_0446 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205367.1 386154 R 671143 CDS YP_003205368.1 392373535 13099003 complement(386846..387646) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; protein mazG 387646 13099003 DAMO_0447 Candidatus Methylomirabilis oxyfera protein mazG YP_003205368.1 386846 R 671143 CDS YP_003205369.1 392373536 13099004 387817..388554 1 NC_013260.1 Zinc/iron transporter 388554 13099004 DAMO_0448 Candidatus Methylomirabilis oxyfera Zinc/iron transporter YP_003205369.1 387817 D 671143 CDS YP_003205370.1 392373537 13099878 388708..390648 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 390648 13099878 DAMO_0449 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205370.1 388708 D 671143 CDS YP_003205371.1 392373538 13098908 390756..391475 1 NC_013260.1 Lytic transglycosylase, catalytic 391475 13098908 DAMO_0450 Candidatus Methylomirabilis oxyfera Lytic transglycosylase, catalytic YP_003205371.1 390756 D 671143 CDS YP_003205372.1 392373539 13098700 complement(391685..391942) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 391942 13098700 DAMO_0451 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205372.1 391685 R 671143 CDS YP_003205373.1 392373540 13098560 392057..392269 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 392269 13098560 DAMO_0452 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205373.1 392057 D 671143 CDS YP_003205374.1 392373541 13099005 392351..392851 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; formaldehyde activating enzyme (Fae) 392851 fae 13099005 fae Candidatus Methylomirabilis oxyfera formaldehyde activating enzyme (Fae) YP_003205374.1 392351 D 671143 CDS YP_003205375.1 392373542 13099006 392982..393866 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; methylene tetrahydromethanopterin dehydrogenase (mtdB) 393866 13099006 DAMO_0455 Candidatus Methylomirabilis oxyfera methylene tetrahydromethanopterin dehydrogenase (mtdB) YP_003205375.1 392982 D 671143 CDS YP_003205376.1 392373543 13099007 393960..394298 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; formylmethanofuran dehydrogenase, subunit D (FwdD) 394298 13099007 DAMO_0456 Candidatus Methylomirabilis oxyfera formylmethanofuran dehydrogenase, subunit D (FwdD) YP_003205376.1 393960 D 671143 CDS YP_003205377.1 392373544 13099008 394291..395646 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; formyltransferase/hydrolase complex subunit beta (fhcB) 395646 fhcB 13099008 fhcB Candidatus Methylomirabilis oxyfera formyltransferase/hydrolase complex subunit beta (fhcB) YP_003205377.1 394291 D 671143 CDS YP_003205378.1 392373545 13099009 395659..397305 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; formyltransferase/hydrolase complex subunit alpha (fhcA) 397305 fhcA 13099009 fhcA Candidatus Methylomirabilis oxyfera formyltransferase/hydrolase complex subunit alpha (fhcA) YP_003205378.1 395659 D 671143 CDS YP_003205379.1 392373546 13099010 397342..398256 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; formyltransferase/hydrolase complex subunit epsilon (fhcD) 398256 fhcD 13099010 fhcD Candidatus Methylomirabilis oxyfera formyltransferase/hydrolase complex subunit epsilon (fhcD) YP_003205379.1 397342 D 671143 CDS YP_003205380.1 392373547 13099011 398290..399099 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; formyltransferase/hydrolase complex subunit gamma (fhcC) 399099 fhcC 13099011 fhcC Candidatus Methylomirabilis oxyfera formyltransferase/hydrolase complex subunit gamma (fhcC) YP_003205380.1 398290 D 671143 CDS YP_003205381.1 392373548 13099012 399125..400063 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; methenyltetrahydromethanopterin cyclohydrolase (Methenyl-H4MPT cyclohydrolase) (mch) 400063 mch 13099012 mch Candidatus Methylomirabilis oxyfera methenyltetrahydromethanopterin cyclohydrolase (Methenyl-H4MPT cyclohydrolase) (mch) YP_003205381.1 399125 D 671143 CDS YP_003205382.1 392373549 13099013 400162..401037 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 401037 13099013 DAMO_0462 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205382.1 400162 D 671143 CDS YP_003205383.1 392373550 13100187 401076..401933 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 401933 13100187 DAMO_0463 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205383.1 401076 D 671143 CDS YP_003205384.1 392373551 13099014 402133..404799 1 NC_013260.1 acetyl-CoA synthetase / acetyltransferase (GNAT) family protein 404799 13099014 DAMO_0464 Candidatus Methylomirabilis oxyfera acetyl-CoA synthetase / acetyltransferase (GNAT) family protein YP_003205384.1 402133 D 671143 CDS YP_003205385.1 392373552 13099015 complement(404837..405787) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; alpha/beta hydrolase 405787 13099015 DAMO_0465 Candidatus Methylomirabilis oxyfera alpha/beta hydrolase YP_003205385.1 404837 R 671143 CDS YP_003205386.1 392373553 13100196 complement(405784..407178) 1 NC_013260.1 aminotransferase class-III 407178 13100196 DAMO_0466 Candidatus Methylomirabilis oxyfera aminotransferase class-III YP_003205386.1 405784 R 671143 CDS YP_003205387.1 392373554 13100195 complement(407175..407918) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; 2, 3-diketo-5-methylthio-1-phosphopentane phosphatase (phosphoserine phosphatase) (serB) 407918 13100195 DAMO_0467 Candidatus Methylomirabilis oxyfera 2, 3-diketo-5-methylthio-1-phosphopentane phosphatase (phosphoserine phosphatase) (serB) YP_003205387.1 407175 R 671143 CDS YP_003205388.1 392373555 13100200 complement(408057..408443) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 408443 13100200 DAMO_0469 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205388.1 408057 R 671143 CDS YP_003205389.1 392373556 13100199 complement(408566..409525) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4) 409525 13100199 DAMO_0470 Candidatus Methylomirabilis oxyfera beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4) YP_003205389.1 408566 R 671143 CDS YP_003205390.1 392373557 13098532 complement(409528..410097) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 410097 13098532 DAMO_0471 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205390.1 409528 R 671143 CDS YP_003205391.1 392373558 13099016 complement(410073..411428) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 411428 13099016 DAMO_0472 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205391.1 410073 R 671143 CDS YP_003205392.1 392373559 13099017 complement(411425..412174) 1 NC_013260.1 3-oxoacyl-(Acyl-carrier protein) reductase 412174 fabG 13099017 fabG Candidatus Methylomirabilis oxyfera 3-oxoacyl-(Acyl-carrier protein) reductase YP_003205392.1 411425 R 671143 CDS YP_003205393.1 392373560 13099019 412652..413722 1 NC_013260.1 Biotin synthetase (Fragment) 413722 13099019 DAMO_0474 Candidatus Methylomirabilis oxyfera Biotin synthetase (Fragment) YP_003205393.1 412652 D 671143 CDS YP_003205394.1 392373561 13099020 413731..415074 1 NC_013260.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (7,8-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase) 415074 bioA 13099020 bioA Candidatus Methylomirabilis oxyfera adenosylmethionine-8-amino-7-oxononanoate aminotransferase (7,8-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase) YP_003205394.1 413731 D 671143 CDS YP_003205395.1 392373562 13099021 415179..415916 1 NC_013260.1 dethiobiotin synthetase 415916 bioD 13099021 bioD Candidatus Methylomirabilis oxyfera dethiobiotin synthetase YP_003205395.1 415179 D 671143 CDS YP_003205396.1 392373563 13099022 415921..416580 1 NC_013260.1 hypothetical protein 416580 13099022 DAMO_0477 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205396.1 415921 D 671143 CDS YP_003205397.1 392373564 13099023 416787..419732 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 419732 13099023 DAMO_0478 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003205397.1 416787 D 671143 CDS YP_003205398.1 392373565 13099024 419893..420882 1 NC_013260.1 hypothetical protein 420882 13099024 DAMO_0479 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205398.1 419893 D 671143 CDS YP_003205399.1 392373566 13099025 420949..423042 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 423042 13099025 DAMO_0480 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003205399.1 420949 D 671143 CDS YP_003205400.1 392373567 13100183 423039..423743 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 423743 13100183 DAMO_0481 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205400.1 423039 D 671143 CDS YP_003205401.1 392373568 13099756 423818..424513 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Haloacid dehalogenase-like hydrolase domain-containing protein 3 424513 13099756 DAMO_0482 Candidatus Methylomirabilis oxyfera Haloacid dehalogenase-like hydrolase domain-containing protein 3 YP_003205401.1 423818 D 671143 CDS YP_003205402.1 392373569 13099026 complement(424548..425222) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 425222 13099026 DAMO_0483 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205402.1 424548 R 671143 CDS YP_003205403.1 392373570 13100016 complement(425254..426276) 1 NC_013260.1 glucokinase (Glucose kinase) 426276 glk 13100016 glk Candidatus Methylomirabilis oxyfera glucokinase (Glucose kinase) YP_003205403.1 425254 R 671143 CDS YP_003205404.1 392373571 13100017 complement(426273..427040) 1 NC_013260.1 6-phosphogluconolactonase 427040 pgl 13100017 pgl Candidatus Methylomirabilis oxyfera 6-phosphogluconolactonase YP_003205404.1 426273 R 671143 CDS YP_003205405.1 392373572 13099027 complement(427093..428688) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1643289; Product type e : enzyme; glucose-6-phosphate 1-dehydrogenase 428688 zwf 13099027 zwf Candidatus Methylomirabilis oxyfera glucose-6-phosphate 1-dehydrogenase YP_003205405.1 427093 R 671143 CDS YP_003205406.1 392373573 13099028 complement(428693..429676) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; 6-phosphogluconate dehydrogenase (gnd-like) 429676 13099028 DAMO_0487 Candidatus Methylomirabilis oxyfera 6-phosphogluconate dehydrogenase (gnd-like) YP_003205406.1 428693 R 671143 CDS YP_003205407.1 392373574 13099029 complement(429721..431463) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 431463 13099029 DAMO_0488 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205407.1 429721 R 671143 CDS YP_003205408.1 392373575 13099030 complement(431360..431818) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 431818 13099030 DAMO_0489 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205408.1 431360 R 671143 CDS YP_003205409.1 392373576 13099031 complement(431772..432341) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 432341 13099031 DAMO_0490 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205409.1 431772 R 671143 CDS YP_003205410.1 392373577 13099032 431832..432218 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 432218 13099032 DAMO_0491 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205410.1 431832 D 671143 CDS YP_003205411.1 392373578 13099033 432264..432452 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 432452 13099033 DAMO_0492 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205411.1 432264 D 671143 CDS YP_003205412.1 392373579 13100249 432467..432802 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 432802 13100249 DAMO_0493 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205412.1 432467 D 671143 CDS YP_003205413.1 392373580 13098647 432900..433619 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8955385; Product type t : transporter; TolQ protein 433619 tolQ 13098647 tolQ Candidatus Methylomirabilis oxyfera TolQ protein YP_003205413.1 432900 D 671143 CDS YP_003205414.1 392373581 13098915 433625..434062 1 NC_013260.1 Biopolymer transport protein exbD 434062 exbD 13098915 exbD Candidatus Methylomirabilis oxyfera Biopolymer transport protein exbD YP_003205414.1 433625 D 671143 CDS YP_003205415.1 392373582 13099034 434064..434900 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 434900 13099034 DAMO_0496 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205415.1 434064 D 671143 CDS YP_003205416.1 392373583 13099035 434918..436270 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 16166536, 16207916; Product type t : transporter; protein tolB 436270 tolB 13099035 tolB Candidatus Methylomirabilis oxyfera protein tolB YP_003205416.1 434918 D 671143 CDS YP_003205417.1 392373584 13099117 436342..436986 1 NC_013260.1 OmpA/MotB domain protein 436986 13099117 DAMO_0498 Candidatus Methylomirabilis oxyfera OmpA/MotB domain protein YP_003205417.1 436342 D 671143 CDS YP_003205418.1 392373585 13099118 437116..438375 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 438375 13099118 DAMO_0499 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205418.1 437116 D 671143 CDS YP_003205419.1 392373586 13099119 438387..438878 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 438878 13099119 DAMO_0500 Candidatus Methylomirabilis oxyfera membrane protein YP_003205419.1 438387 D 671143 CDS YP_003205420.1 392373587 13099120 complement(438973..440052) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) 440052 leuB 13099120 leuB Candidatus Methylomirabilis oxyfera 3-isopropylmalate dehydrogenase (Beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) YP_003205420.1 438973 R 671143 CDS YP_003205421.1 392373588 13099121 440154..440846 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; GTP-binding protein engB 440846 engB 13099121 engB Candidatus Methylomirabilis oxyfera GTP-binding protein engB YP_003205421.1 440154 D 671143 CDS YP_003205422.1 392373589 13098853 440910..442667 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; TPR domain-containing protein 442667 13098853 DAMO_0503 Candidatus Methylomirabilis oxyfera TPR domain-containing protein YP_003205422.1 440910 D 671143 CDS YP_003205423.1 392373590 13100179 442664..443485 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 443485 13100179 DAMO_0504 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205423.1 442664 D 671143 CDS YP_003205424.1 392373591 13099122 443489..444091 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 444091 13099122 DAMO_0505 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205424.1 443489 D 671143 CDS YP_003205425.1 392373592 13098852 444084..444356 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 444356 13098852 DAMO_0506 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205425.1 444084 D 671143 CDS YP_003205426.1 392373593 13099124 444534..445472 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 4306285; Product type e : enzyme; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) 445472 prs 13099124 prs Candidatus Methylomirabilis oxyfera ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) YP_003205426.1 444534 D 671143 CDS YP_003205427.1 392373594 13099125 445546..446208 1 NC_013260.1 50S ribosomal protein L25 (General stress protein CTC) 446208 rplY 13099125 rplY Candidatus Methylomirabilis oxyfera 50S ribosomal protein L25 (General stress protein CTC) YP_003205427.1 445546 D 671143 CDS YP_003205428.1 392373595 13098500 446254..446829 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1833189, 4981785, 8635758; Product type e : enzyme; peptidyl-tRNA hydrolase 446829 pth 13098500 pth Candidatus Methylomirabilis oxyfera peptidyl-tRNA hydrolase YP_003205428.1 446254 D 671143 CDS YP_003205429.1 392373596 13100176 446849..447229 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; 30S ribosomal protein S6 447229 13100176 DAMO_0510 Candidatus Methylomirabilis oxyfera 30S ribosomal protein S6 YP_003205429.1 446849 D 671143 CDS YP_003205430.1 392373597 13099126 447231..447614 1 NC_013260.1 hypothetical protein 447614 13099126 DAMO_0511 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205430.1 447231 D 671143 CDS YP_003205431.1 392373598 13099127 447670..447906 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure; 30S ribosomal protein S18 447906 rpsR 13099127 rpsR Candidatus Methylomirabilis oxyfera 30S ribosomal protein S18 YP_003205431.1 447670 D 671143 CDS YP_003205432.1 392373599 13099128 447956..448906 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 448906 13099128 DAMO_0513 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205432.1 447956 D 671143 CDS YP_003205433.1 392373600 13099129 448947..449396 1 NC_013260.1 50S ribosomal protein L9 449396 rplI 13099129 rplI Candidatus Methylomirabilis oxyfera 50S ribosomal protein L9 YP_003205433.1 448947 D 671143 CDS YP_003205434.1 392373601 13099848 449416..450810 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; replicative DNA helicase, dnaB 450810 13099848 DAMO_0515 Candidatus Methylomirabilis oxyfera replicative DNA helicase, dnaB YP_003205434.1 449416 D 671143 CDS YP_003205435.1 392373602 13098680 450909..452288 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; DNA repair protein 452288 radA 13098680 radA Candidatus Methylomirabilis oxyfera DNA repair protein YP_003205435.1 450909 D 671143 CDS YP_003205436.1 392373603 13098764 452363..452434 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 452434 13098764 DAMO_0517 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205436.1 452363 D 671143 CDS YP_003205437.1 392373604 13098684 452578..453066 1 NC_013260.1 CarD-like transcriptional regulator 453066 13098684 DAMO_0518 Candidatus Methylomirabilis oxyfera CarD-like transcriptional regulator YP_003205437.1 452578 D 671143 CDS YP_003205438.1 392373605 13099130 453113..454135 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 454135 13099130 DAMO_0519 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205438.1 453113 D 671143 CDS YP_003205439.1 392373606 13099132 455418..457010 1 NC_013260.1 cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) 457010 cysS 13099132 cysS Candidatus Methylomirabilis oxyfera cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) YP_003205439.1 455418 D 671143 CDS YP_003205440.1 392373607 13098749 457007..457792 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; hypothetical protein 457792 13098749 DAMO_0523 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205440.1 457007 D 671143 CDS YP_003205441.1 392373608 13099136 458479..459681 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type f : factor; Elongation factor Tu (EF-Tu) 459681 tufB 13099136 tufB Candidatus Methylomirabilis oxyfera Elongation factor Tu (EF-Tu) YP_003205441.1 458479 D 671143 CDS YP_003205442.1 392373609 13098475 complement(459818..460129) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 460129 13098475 DAMO_0525 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205442.1 459818 R 671143 CDS YP_003205443.1 392373610 13100072 460284..460478 1 NC_013260.1 preprotein translocase subunit secE 460478 secE 13100072 secE Candidatus Methylomirabilis oxyfera preprotein translocase subunit secE YP_003205443.1 460284 D 671143 CDS YP_003205444.1 392373611 13099137 460509..461039 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type f : factor; component in transcription antitermination 461039 nusG 13099137 nusG Candidatus Methylomirabilis oxyfera component in transcription antitermination YP_003205444.1 460509 D 671143 CDS YP_003205445.1 392373612 13099859 461089..461511 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure; 50S ribosomal protein L11 461511 rplK 13099859 rplK Candidatus Methylomirabilis oxyfera 50S ribosomal protein L11 YP_003205445.1 461089 D 671143 CDS YP_003205446.1 392373613 13099870 461618..462325 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure; 50S ribosomal protein L1 462325 rplA 13099870 rplA Candidatus Methylomirabilis oxyfera 50S ribosomal protein L1 YP_003205446.1 461618 D 671143 CDS YP_003205447.1 392373614 13099879 462357..462872 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure; 50S ribosomal protein L10 462872 rplJ 13099879 rplJ Candidatus Methylomirabilis oxyfera 50S ribosomal protein L10 YP_003205447.1 462357 D 671143 CDS YP_003205448.1 392373615 13099880 462948..463340 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure; 50S ribosomal protein L7/L12 463340 rplL 13099880 rplL Candidatus Methylomirabilis oxyfera 50S ribosomal protein L7/L12 YP_003205448.1 462948 D 671143 CDS YP_003205449.1 392373616 13098873 463375..467391 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; RNA polymerase subunit beta 467391 rpoB 13098873 rpoB Candidatus Methylomirabilis oxyfera RNA polymerase subunit beta YP_003205449.1 463375 D 671143 CDS YP_003205450.1 392373617 13099138 467456..471553 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; RNA polymerase, beta prime subunit 471553 rpoC 13099138 rpoC Candidatus Methylomirabilis oxyfera RNA polymerase, beta prime subunit YP_003205450.1 467456 D 671143 CDS YP_003205451.1 392373618 13099881 471646..472023 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S12 472023 rpsL 13099881 rpsL Candidatus Methylomirabilis oxyfera 30S ribosomal protein S12 YP_003205451.1 471646 D 671143 CDS YP_003205452.1 392373619 13098806 472130..472600 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S7 472600 rpsG 13098806 rpsG Candidatus Methylomirabilis oxyfera 30S ribosomal protein S7 YP_003205452.1 472130 D 671143 CDS YP_003205453.1 392373620 13098626 472699..474792 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type f : factor; elongation factor G 474792 fusA 13098626 fusA Candidatus Methylomirabilis oxyfera elongation factor G YP_003205453.1 472699 D 671143 CDS YP_003205454.1 392373621 13098751 474826..476028 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type f : factor; Elongation factor Tu (EF-Tu) 476028 tufB 13098751 tufB Candidatus Methylomirabilis oxyfera Elongation factor Tu (EF-Tu) YP_003205454.1 474826 D 671143 CDS YP_003205455.1 392373622 13098743 476048..476356 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S10 476356 rpsJ 13098743 rpsJ Candidatus Methylomirabilis oxyfera 30S ribosomal protein S10 YP_003205455.1 476048 D 671143 CDS YP_003205456.1 392373623 13098750 476428..477060 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L3 477060 rplC 13098750 rplC Candidatus Methylomirabilis oxyfera 50S ribosomal protein L3 YP_003205456.1 476428 D 671143 CDS YP_003205457.1 392373624 13098752 477065..477700 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L4 477700 rplD 13098752 rplD Candidatus Methylomirabilis oxyfera 50S ribosomal protein L4 YP_003205457.1 477065 D 671143 CDS YP_003205458.1 392373625 13098770 477697..477987 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L23 477987 rplW 13098770 rplW Candidatus Methylomirabilis oxyfera 50S ribosomal protein L23 YP_003205458.1 477697 D 671143 CDS YP_003205459.1 392373626 13098771 477988..478806 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L2 478806 rplB 13098771 rplB Candidatus Methylomirabilis oxyfera 50S ribosomal protein L2 YP_003205459.1 477988 D 671143 CDS YP_003205460.1 392373627 13098785 478888..479172 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S19 479172 rpsS 13098785 rpsS Candidatus Methylomirabilis oxyfera 30S ribosomal protein S19 YP_003205460.1 478888 D 671143 CDS YP_003205461.1 392373628 13098780 479196..479543 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L22 479543 rplV 13098780 rplV Candidatus Methylomirabilis oxyfera 50S ribosomal protein L22 YP_003205461.1 479196 D 671143 CDS YP_003205462.1 392373629 13100232 479694..480401 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S3 480401 rpsC 13100232 rpsC Candidatus Methylomirabilis oxyfera 30S ribosomal protein S3 YP_003205462.1 479694 D 671143 CDS YP_003205463.1 392373630 13098874 480410..480829 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L16 480829 rplP 13098874 rplP Candidatus Methylomirabilis oxyfera 50S ribosomal protein L16 YP_003205463.1 480410 D 671143 CDS YP_003205464.1 392373631 13098783 480838..481059 1 NC_013260.1 50S ribosomal protein L29 481059 rpmC 13098783 rpmC Candidatus Methylomirabilis oxyfera 50S ribosomal protein L29 YP_003205464.1 480838 D 671143 CDS YP_003205465.1 392373632 13098745 481056..481325 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S17 481325 rpsQ 13098745 rpsQ Candidatus Methylomirabilis oxyfera 30S ribosomal protein S17 YP_003205465.1 481056 D 671143 CDS YP_003205466.1 392373633 13098746 481362..481709 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L14 481709 rplN 13098746 rplN Candidatus Methylomirabilis oxyfera 50S ribosomal protein L14 YP_003205466.1 481362 D 671143 CDS YP_003205467.1 392373634 13098762 481737..482069 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L24 482069 rplX 13098762 rplX Candidatus Methylomirabilis oxyfera 50S ribosomal protein L24 YP_003205467.1 481737 D 671143 CDS YP_003205468.1 392373635 13098744 482077..482694 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L5 482694 rplE 13098744 rplE Candidatus Methylomirabilis oxyfera 50S ribosomal protein L5 YP_003205468.1 482077 D 671143 CDS YP_003205469.1 392373636 13098790 482770..482955 1 NC_013260.1 30S ribosomal protein S14 482955 rpsZ 13098790 rpsZ Candidatus Methylomirabilis oxyfera 30S ribosomal protein S14 YP_003205469.1 482770 D 671143 CDS YP_003205470.1 392373637 13098761 483035..483430 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S8, and regulator 483430 rpsH 13098761 rpsH Candidatus Methylomirabilis oxyfera 30S ribosomal protein S8, and regulator YP_003205470.1 483035 D 671143 CDS YP_003205471.1 392373638 13098777 483527..484063 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L6 484063 rplF 13098777 rplF Candidatus Methylomirabilis oxyfera 50S ribosomal protein L6 YP_003205471.1 483527 D 671143 CDS YP_003205472.1 392373639 13098756 484095..484463 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L18 484463 rplR 13098756 rplR Candidatus Methylomirabilis oxyfera 50S ribosomal protein L18 YP_003205472.1 484095 D 671143 CDS YP_003205473.1 392373640 13098766 484531..485040 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S5 485040 rpsE 13098766 rpsE Candidatus Methylomirabilis oxyfera 30S ribosomal protein S5 YP_003205473.1 484531 D 671143 CDS YP_003205474.1 392373641 13098788 485042..485242 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L30 485242 rpmD 13098788 rpmD Candidatus Methylomirabilis oxyfera 50S ribosomal protein L30 YP_003205474.1 485042 D 671143 CDS YP_003205475.1 392373642 13098754 485239..485685 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L15 485685 rplO 13098754 rplO Candidatus Methylomirabilis oxyfera 50S ribosomal protein L15 YP_003205475.1 485239 D 671143 CDS YP_003205476.1 392373643 13098763 485682..486992 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type t : transporter; preprotein translocase subunit SecY 486992 secY 13098763 secY Candidatus Methylomirabilis oxyfera preprotein translocase subunit SecY YP_003205476.1 485682 D 671143 CDS YP_003205477.1 392373644 13098747 486999..487646 1 NC_013260.1 adenylate kinase 487646 adk 13098747 adk Candidatus Methylomirabilis oxyfera adenylate kinase YP_003205477.1 486999 D 671143 CDS YP_003205478.1 392373645 13098794 487655..488434 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10555963, 8471602; Product type e : enzyme; methionine aminopeptidase 488434 map 13098794 map Candidatus Methylomirabilis oxyfera methionine aminopeptidase YP_003205478.1 487655 D 671143 CDS YP_003205479.1 392373646 13098781 488434..488652 1 NC_013260.1 translation initiation factor IF-1 488652 infA 13098781 infA Candidatus Methylomirabilis oxyfera translation initiation factor IF-1 YP_003205479.1 488434 D 671143 CDS YP_003205480.1 392373647 13098748 complement(488671..489210) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 489210 13098748 DAMO_0563 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205480.1 488671 R 671143 CDS YP_003205481.1 392373648 13098757 489374..489784 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure; 30S ribosomal protein S11 489784 rpsK 13098757 rpsK Candidatus Methylomirabilis oxyfera 30S ribosomal protein S11 YP_003205481.1 489374 D 671143 CDS YP_003205482.1 392373649 13098779 489950..490528 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 30S ribosomal protein S4 490528 rpsD 13098779 rpsD Candidatus Methylomirabilis oxyfera 30S ribosomal protein S4 YP_003205482.1 489950 D 671143 CDS YP_003205483.1 392373650 13098767 490550..491578 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; DNA-directed RNA polymerase subunit alpha 491578 rpoA 13098767 rpoA Candidatus Methylomirabilis oxyfera DNA-directed RNA polymerase subunit alpha YP_003205483.1 490550 D 671143 CDS YP_003205484.1 392373651 13098755 491619..492092 1 NC_013260.1 50S ribosomal protein L17 492092 13098755 DAMO_0567 Candidatus Methylomirabilis oxyfera 50S ribosomal protein L17 YP_003205484.1 491619 D 671143 CDS YP_003205485.1 392373652 13098808 492277..494361 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type f : factor; elongation factor G 494361 fusA 13098808 fusA Candidatus Methylomirabilis oxyfera elongation factor G YP_003205485.1 492277 D 671143 CDS YP_003205486.1 392373653 13099895 494490..494951 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 494951 13099895 DAMO_0569 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205486.1 494490 D 671143 CDS YP_003205487.1 392373654 13098531 complement(494902..494991) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 494991 13098531 DAMO_0570 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205487.1 494902 R 671143 CDS YP_003205488.1 392373655 13098470 495031..496332 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12213659, 15720542, 16193062, 6326058; Product type f : factor; transcription elongation protein nusA (N utilization substance protein A) (L factor) 496332 nusA 13098470 nusA Candidatus Methylomirabilis oxyfera transcription elongation protein nusA (N utilization substance protein A) (L factor) YP_003205488.1 495031 D 671143 CDS YP_003205489.1 392373656 13099139 496360..496995 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 496995 13099139 DAMO_0572 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205489.1 496360 D 671143 CDS YP_003205490.1 392373657 13098784 496988..499381 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1764105, 1805969; Product type f : factor; translation initiation factor IF-2 499381 infB 13098784 infB Candidatus Methylomirabilis oxyfera translation initiation factor IF-2 YP_003205490.1 496988 D 671143 CDS YP_003205491.1 392373658 13098778 499451..499738 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 499738 13098778 DAMO_0575 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205491.1 499451 D 671143 CDS YP_003205492.1 392373659 13098769 499773..500132 1 NC_013260.1 ribosome-binding factor A 500132 rbfA 13098769 rbfA Candidatus Methylomirabilis oxyfera ribosome-binding factor A YP_003205492.1 499773 D 671143 CDS YP_003205493.1 392373660 13099140 500138..501010 1 NC_013260.1 phP C-terminal domain-containing protein 501010 13099140 DAMO_0577 Candidatus Methylomirabilis oxyfera phP C-terminal domain-containing protein YP_003205493.1 500138 D 671143 CDS YP_003205494.1 392373661 13100233 501027..501968 1 NC_013260.1 tRNA pseudouridine synthase B 501968 truB 13100233 truB Candidatus Methylomirabilis oxyfera tRNA pseudouridine synthase B YP_003205494.1 501027 D 671143 CDS YP_003205495.1 392373662 13099141 501965..502972 1 NC_013260.1 riboflavin biosynthesis protein RibF 502972 13099141 DAMO_0579 Candidatus Methylomirabilis oxyfera riboflavin biosynthesis protein RibF YP_003205495.1 501965 D 671143 CDS YP_003205496.1 392373663 13099142 502995..503264 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1764513, 6806564; Product type s : structure; 30S ribosomal protein S15 503264 rpsO 13099142 rpsO Candidatus Methylomirabilis oxyfera 30S ribosomal protein S15 YP_003205496.1 502995 D 671143 CDS YP_003205497.1 392373664 13098624 503261..505348 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2432069, 8825779; Product type e : enzyme; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) 505348 pnp 13098624 pnp Candidatus Methylomirabilis oxyfera Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) YP_003205497.1 503261 D 671143 CDS YP_003205498.1 392373665 13099143 505364..506617 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; hypothetical protein 506617 ymxG 13099143 ymxG Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205498.1 505364 D 671143 CDS YP_003205499.1 392373666 13098471 506725..507990 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10926519, 1608947, 3036807; Product type e : enzyme; adenylosuccinate lyase 507990 purB 13098471 purB Candidatus Methylomirabilis oxyfera adenylosuccinate lyase YP_003205499.1 506725 D 671143 CDS YP_003205500.1 392373667 13099144 508046..508300 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15301530, 15301532; Product type f : factor; phosphoribosylformylglycinamidine synthase subunit PurS 508300 purS 13099144 purS Candidatus Methylomirabilis oxyfera phosphoribosylformylglycinamidine synthase subunit PurS YP_003205500.1 508046 D 671143 CDS YP_003205501.1 392373668 13098714 508297..509019 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1398079, 15301532; Product type e : enzyme; phosphoribosylformylglycinamidine synthase I 509019 purQ 13098714 purQ Candidatus Methylomirabilis oxyfera phosphoribosylformylglycinamidine synthase I YP_003205501.1 508297 D 671143 CDS YP_003205502.1 392373669 13099145 509030..511246 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1398079, 15301532; Product type e : enzyme; phosphoribosylformylglycinamidine synthase II 511246 purL 13099145 purL Candidatus Methylomirabilis oxyfera phosphoribosylformylglycinamidine synthase II YP_003205502.1 509030 D 671143 CDS YP_003205503.1 392373670 13098868 511264..512568 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11988515, 3139660, 8117070; Product type e : enzyme; homoserine dehydrogenase 512568 hom 13098868 hom Candidatus Methylomirabilis oxyfera homoserine dehydrogenase YP_003205503.1 511264 D 671143 CDS YP_003205504.1 392373671 13099146 512576..513640 1 NC_013260.1 threonine synthase 513640 thrC 13099146 thrC Candidatus Methylomirabilis oxyfera threonine synthase YP_003205504.1 512576 D 671143 CDS YP_003205505.1 392373672 13098909 514234..514809 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 514809 13098909 DAMO_0589 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205505.1 514234 D 671143 CDS YP_003205506.1 392373673 13098687 514868..516019 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; isovaleryl-CoA dehydrogenase 516019 ivd 13098687 ivd Candidatus Methylomirabilis oxyfera isovaleryl-CoA dehydrogenase YP_003205506.1 514868 D 671143 CDS YP_003205507.1 392373674 13098696 516283..517146 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; LAO/AO transport system ATPase, partial, 5' end 517146 13098696 DAMO_0591 Candidatus Methylomirabilis oxyfera LAO/AO transport system ATPase, partial, 5' end YP_003205507.1 516283 D 671143 CDS YP_003205508.1 392373675 13098695 517074..517220 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; LAO/AO transport system ATPase, partial, 3' end 517220 13098695 DAMO_0592 Candidatus Methylomirabilis oxyfera LAO/AO transport system ATPase, partial, 3' end YP_003205508.1 517074 D 671143 CDS YP_003205509.1 392373676 13098692 complement(517326..518246) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 518246 13098692 DAMO_0593 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205509.1 517326 R 671143 CDS YP_003205510.1 392373677 13098445 complement(518534..518776) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 518776 13098445 DAMO_0594 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205510.1 518534 R 671143 CDS YP_003205511.1 392373678 13098846 complement(518769..519257) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 519257 13098846 DAMO_0595 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205511.1 518769 R 671143 CDS YP_003205512.1 392373679 13099882 519412..520383 1 NC_013260.1 3-oxoacid CoA-transferase subunit A 520383 13099882 DAMO_0596 Candidatus Methylomirabilis oxyfera 3-oxoacid CoA-transferase subunit A YP_003205512.1 519412 D 671143 CDS YP_003205513.1 392373680 13099883 520380..521174 1 NC_013260.1 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 521174 AtoA 13099883 AtoA Candidatus Methylomirabilis oxyfera acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_003205513.1 520380 D 671143 CDS YP_003205514.1 392373681 13099147 521268..521870 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 521870 13099147 DAMO_0599 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205514.1 521268 D 671143 CDS YP_003205515.1 392373682 13098480 521880..522191 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 522191 13098480 DAMO_0600 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205515.1 521880 D 671143 CDS YP_003205516.1 392373683 13099148 complement(522332..522709) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 522709 13099148 DAMO_0601 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205516.1 522332 R 671143 CDS YP_003205517.1 392373684 13099149 522950..523150 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 523150 13099149 DAMO_0602 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205517.1 522950 D 671143 CDS YP_003205518.1 392373685 13099150 523394..523585 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 523585 13099150 DAMO_0603 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205518.1 523394 D 671143 CDS YP_003205519.1 392373686 13099151 complement(523560..523817) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 523817 13099151 DAMO_0604 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205519.1 523560 R 671143 CDS YP_003205520.1 392373687 13099152 complement(524095..524478) 1 NC_013260.1 PilT-like protein protein 524478 13099152 DAMO_0605 Candidatus Methylomirabilis oxyfera PilT-like protein protein YP_003205520.1 524095 R 671143 CDS YP_003205521.1 392373688 13099153 complement(524471..524746) 1 NC_013260.1 transcriptional regulator, AbrB family protein 524746 13099153 DAMO_0606 Candidatus Methylomirabilis oxyfera transcriptional regulator, AbrB family protein YP_003205521.1 524471 R 671143 CDS YP_003205522.1 392373689 13099926 complement(524923..525588) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15355966, 16042411; Product type c : carrier; heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit 525588 yedZ 13099926 yedZ Candidatus Methylomirabilis oxyfera heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit YP_003205522.1 524923 R 671143 CDS YP_003205523.1 392373690 13099154 complement(525593..526546) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15355966, 16042411; Product type e : enzyme; exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export 526546 yedY 13099154 yedY Candidatus Methylomirabilis oxyfera exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export YP_003205523.1 525593 R 671143 CDS YP_003205524.1 392373691 13099155 complement(526723..527283) 1 NC_013260.1 NUDIX hydrolase 527283 13099155 DAMO_0610 Candidatus Methylomirabilis oxyfera NUDIX hydrolase YP_003205524.1 526723 R 671143 CDS YP_003205525.1 392373692 13099156 complement(527381..528775) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 528775 13099156 DAMO_0611 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205525.1 527381 R 671143 CDS YP_003205526.1 392373693 13099157 complement(528780..529784) 1 NC_013260.1 radical SAM protein 529784 13099157 DAMO_0612 Candidatus Methylomirabilis oxyfera radical SAM protein YP_003205526.1 528780 R 671143 CDS YP_003205527.1 392373694 13099158 complement(529803..530792) 1 NC_013260.1 radical SAM protein 530792 13099158 DAMO_0613 Candidatus Methylomirabilis oxyfera radical SAM protein YP_003205527.1 529803 R 671143 CDS YP_003205528.1 392373695 13099159 complement(530804..531478) 1 NC_013260.1 Dolichol phosphate mannosyltransferase or dolichol phosphate beta glucosyltrandferase 531478 13099159 DAMO_0614 Candidatus Methylomirabilis oxyfera Dolichol phosphate mannosyltransferase or dolichol phosphate beta glucosyltrandferase YP_003205528.1 530804 R 671143 CDS YP_003205529.1 392373696 13099160 complement(531593..532402) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Methyltransferase type 11 532402 13099160 DAMO_0615 Candidatus Methylomirabilis oxyfera Methyltransferase type 11 YP_003205529.1 531593 R 671143 CDS YP_003205530.1 392373697 13099161 532657..532920 1 NC_013260.1 hypothetical protein 532920 13099161 DAMO_0616 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205530.1 532657 D 671143 CDS YP_003205531.1 392373698 13098899 532917..533195 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 533195 13098899 DAMO_0617 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205531.1 532917 D 671143 CDS YP_003205532.1 392373699 13098898 complement(533455..533697) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 533697 13098898 DAMO_0618 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205532.1 533455 R 671143 CDS YP_003205533.1 392373700 13099162 533712..533954 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 533954 13099162 DAMO_0619 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205533.1 533712 D 671143 CDS YP_003205534.1 392373701 13099163 complement(533940..534476) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 534476 13099163 DAMO_0620 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205534.1 533940 R 671143 CDS YP_003205535.1 392373702 13099164 complement(534520..537156) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 537156 13099164 DAMO_0621 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205535.1 534520 R 671143 CDS YP_003205536.1 392373703 13099165 complement(537153..537554) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10841552, 11938352; Product type e : enzyme; peptide methionine sulfoxide reductase msrB 537554 msrB 13099165 msrB Candidatus Methylomirabilis oxyfera peptide methionine sulfoxide reductase msrB YP_003205536.1 537153 R 671143 CDS YP_003205537.1 392373704 13099166 complement(537607..537675) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 537675 13099166 DAMO_0623 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205537.1 537607 R 671143 CDS YP_003205538.1 392373705 13099167 complement(538011..538655) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 538655 13099167 DAMO_0624 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205538.1 538011 R 671143 CDS YP_003205539.1 392373706 13099168 complement(538789..539052) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 539052 13099168 DAMO_0625 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205539.1 538789 R 671143 CDS YP_003205540.1 392373707 13099169 complement(538815..538913) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 538913 13099169 DAMO_0626 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205540.1 538815 R 671143 CDS YP_003205541.1 392373708 13099170 539157..539492 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 539492 13099170 DAMO_0627 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205541.1 539157 D 671143 CDS YP_003205542.1 392373709 13099171 complement(539516..539683) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 539683 13099171 DAMO_0628 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205542.1 539516 R 671143 CDS YP_003205543.1 392373710 13099172 complement(539819..540031) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 540031 13099172 DAMO_0629 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205543.1 539819 R 671143 CDS YP_003205544.1 392373711 13099173 complement(540224..540403) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 540403 13099173 DAMO_0630 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205544.1 540224 R 671143 CDS YP_003205545.1 392373712 13098561 540368..540670 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 540670 13098561 DAMO_0631 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205545.1 540368 D 671143 CDS YP_003205546.1 392373713 13099174 complement(540657..540950) 1 NC_013260.1 transcriptional regulator 540950 yddM 13099174 yddM Candidatus Methylomirabilis oxyfera transcriptional regulator YP_003205546.1 540657 R 671143 CDS YP_003205547.1 392373714 13099175 complement(541123..541353) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 541353 13099175 DAMO_0633 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205547.1 541123 R 671143 CDS YP_003205548.1 392373715 13099176 complement(541350..541574) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 541574 13099176 DAMO_0634 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205548.1 541350 R 671143 CDS YP_003205549.1 392373716 13099177 complement(541639..541812) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 541812 13099177 DAMO_0635 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205549.1 541639 R 671143 CDS YP_003205550.1 392373717 13099178 complement(542200..542496) 1 NC_013260.1 helix-turn-helix family protein 542496 13099178 DAMO_0636 Candidatus Methylomirabilis oxyfera helix-turn-helix family protein YP_003205550.1 542200 R 671143 CDS YP_003205551.1 392373718 13099179 complement(542508..542792) 1 NC_013260.1 Plasmid maintenance system killer 542792 13099179 DAMO_0637 Candidatus Methylomirabilis oxyfera Plasmid maintenance system killer YP_003205551.1 542508 R 671143 CDS YP_003205552.1 392373719 13099180 543015..545063 1 NC_013260.1 Multimodular transpeptidase-transglycosylase 545063 13099180 DAMO_0638 Candidatus Methylomirabilis oxyfera Multimodular transpeptidase-transglycosylase YP_003205552.1 543015 D 671143 CDS YP_003205553.1 392373720 13099182 545432..545878 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 545878 13099182 DAMO_0639 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205553.1 545432 D 671143 CDS YP_003205554.1 392373721 13098897 complement(545951..546562) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 546562 13098897 DAMO_0640 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205554.1 545951 R 671143 CDS YP_003205555.1 392373722 13099183 complement(546686..546862) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 546862 13099183 DAMO_0641 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205555.1 546686 R 671143 CDS YP_003205556.1 392373723 13099184 546971..547273 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 547273 13099184 DAMO_0642 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205556.1 546971 D 671143 CDS YP_003205557.1 392373724 13099185 547270..547566 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 547566 13099185 DAMO_0643 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205557.1 547270 D 671143 CDS YP_003205558.1 392373725 13099186 complement(547594..547749) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 547749 13099186 DAMO_0644 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205558.1 547594 R 671143 CDS YP_003205559.1 392373726 13099187 547771..548910 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; isovaleryl-CoA dehydrogenase 548910 ivd 13099187 ivd Candidatus Methylomirabilis oxyfera isovaleryl-CoA dehydrogenase YP_003205559.1 547771 D 671143 CDS YP_003205560.1 392373727 13099188 548954..549754 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 15028689; Product type c : carrier; protein fixA; electron transfer flavoprotein beta-subunit (Beta-ETF) 549754 fixA 13099188 fixA Candidatus Methylomirabilis oxyfera protein fixA; electron transfer flavoprotein beta-subunit (Beta-ETF) YP_003205560.1 548954 D 671143 CDS YP_003205561.1 392373728 13099757 549850..550839 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 15028689; Product type c : carrier; protein FixB; electron transfer flavoprotein alpha chain 550839 fixB 13099757 fixB Candidatus Methylomirabilis oxyfera protein FixB; electron transfer flavoprotein alpha chain YP_003205561.1 549850 D 671143 CDS YP_003205562.1 392373729 13099189 550961..551311 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; iron-sulfur cluster binding protein, partial, 5' end 551311 13099189 DAMO_0648 Candidatus Methylomirabilis oxyfera iron-sulfur cluster binding protein, partial, 5' end YP_003205562.1 550961 D 671143 CDS YP_003205563.1 392373730 13099190 551185..552933 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; iron-sulfur cluster-binding protein 552933 13099190 DAMO_0649 Candidatus Methylomirabilis oxyfera iron-sulfur cluster-binding protein YP_003205563.1 551185 D 671143 CDS YP_003205564.1 392373731 13099193 555133..556443 1 NC_013260.1 Sterol carrier protein x/sterol carrier protein 2 related protein 556443 13099193 DAMO_0652 Candidatus Methylomirabilis oxyfera Sterol carrier protein x/sterol carrier protein 2 related protein YP_003205564.1 555133 D 671143 CDS YP_003205565.1 392373732 13099194 556600..557166 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 557166 13099194 DAMO_0654 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205565.1 556600 D 671143 CDS YP_003205566.1 392373733 13098481 complement(557170..557268) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 557268 13098481 DAMO_0655 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205566.1 557170 R 671143 CDS YP_003205567.1 392373734 13100201 557542..557889 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 557889 13100201 DAMO_0656 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205567.1 557542 D 671143 CDS YP_003205568.1 392373735 13100202 complement(558082..558255) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 558255 13100202 DAMO_0657 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205568.1 558082 R 671143 CDS YP_003205569.1 392373736 13099195 558311..560035 1 NC_013260.1 General secretion pathway protein A 560035 exeA 13099195 exeA Candidatus Methylomirabilis oxyfera General secretion pathway protein A YP_003205569.1 558311 D 671143 CDS YP_003205570.1 392373737 13099196 560043..560855 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 560855 13099196 DAMO_0659 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205570.1 560043 D 671143 CDS YP_003205571.1 392373738 13098574 complement(560906..561337) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 561337 13098574 DAMO_0660 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205571.1 560906 R 671143 CDS YP_003205572.1 392373739 13098575 561500..561697 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 561697 13098575 DAMO_0661 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205572.1 561500 D 671143 CDS YP_003205573.1 392373740 13099197 561757..564573 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 3300774; Product type e : enzyme; Valyl-tRNA synthetase (Valine--tRNA ligase) 564573 valS 13099197 valS Candidatus Methylomirabilis oxyfera Valyl-tRNA synthetase (Valine--tRNA ligase) YP_003205573.1 561757 D 671143 CDS YP_003205574.1 392373741 13099279 564590..565420 1 NC_013260.1 hypothetical protein 565420 13099279 DAMO_0663 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205574.1 564590 D 671143 CDS YP_003205575.1 392373742 13099280 565427..566191 1 NC_013260.1 type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) 566191 coaX 13099280 coaX Candidatus Methylomirabilis oxyfera type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) YP_003205575.1 565427 D 671143 CDS YP_003205576.1 392373743 13099281 complement(566219..566470) 1 NC_013260.1 Sec-independent protein translocase protein TatA/E 566470 13099281 DAMO_0665 Candidatus Methylomirabilis oxyfera Sec-independent protein translocase protein TatA/E YP_003205576.1 566219 R 671143 CDS YP_003205577.1 392373744 13099282 566660..567109 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11154066; Product type s : structure; 50S ribosomal protein L13 567109 rplM 13099282 rplM Candidatus Methylomirabilis oxyfera 50S ribosomal protein L13 YP_003205577.1 566660 D 671143 CDS YP_003205578.1 392373745 13100180 567119..567514 1 NC_013260.1 30S ribosomal protein S9 567514 rpsI 13100180 rpsI Candidatus Methylomirabilis oxyfera 30S ribosomal protein S9 YP_003205578.1 567119 D 671143 CDS YP_003205579.1 392373746 13099283 567642..568712 1 NC_013260.1 N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) 568712 argC 13099283 argC Candidatus Methylomirabilis oxyfera N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) YP_003205579.1 567642 D 671143 CDS YP_003205580.1 392373747 13099284 568795..570012 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; arginine biosynthesis bifunctional protein 570012 argJ 13099284 argJ Candidatus Methylomirabilis oxyfera arginine biosynthesis bifunctional protein YP_003205580.1 568795 D 671143 CDS YP_003205581.1 392373748 13099285 complement(570116..570274) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 570274 13099285 DAMO_0670 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205581.1 570116 R 671143 CDS YP_003205582.1 392373749 13098883 570320..571108 1 NC_013260.1 30S ribosomal protein S2 571108 rpsB 13098883 rpsB Candidatus Methylomirabilis oxyfera 30S ribosomal protein S2 YP_003205582.1 570320 D 671143 CDS YP_003205583.1 392373750 13099286 571229..571846 1 NC_013260.1 elongation factor Ts 571846 tsf 13099286 tsf Candidatus Methylomirabilis oxyfera elongation factor Ts YP_003205583.1 571229 D 671143 CDS YP_003205584.1 392373751 13100054 571893..572621 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 10218107, 15857829, 16095620; Product type e : enzyme; Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) 572621 pyrH 13100054 pyrH Candidatus Methylomirabilis oxyfera Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) YP_003205584.1 571893 D 671143 CDS YP_003205585.1 392373752 13099287 572615..573172 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8861897, 8890247; Product type f : factor; ribosome recycling factor (Ribosome-releasing factor) (RRF) 573172 frr 13099287 frr Candidatus Methylomirabilis oxyfera ribosome recycling factor (Ribosome-releasing factor) (RRF) YP_003205585.1 572615 D 671143 CDS YP_003205586.1 392373753 13098753 573227..574030 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 1323037, 8654980; Product type e : enzyme; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) 574030 cdsA 13098753 cdsA Candidatus Methylomirabilis oxyfera phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) YP_003205586.1 573227 D 671143 CDS YP_003205587.1 392373754 13098782 574027..575607 1 NC_013260.1 Apolipoprotein N-acyltransferase (ALP N-acyltransferase) 575607 lnt 13098782 lnt Candidatus Methylomirabilis oxyfera Apolipoprotein N-acyltransferase (ALP N-acyltransferase) YP_003205587.1 574027 D 671143 CDS YP_003205588.1 392373755 13099907 575716..576720 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 7664746; Product type f : factor; peptide chain release factor 2 (RF-2) 576720 prfB 13099907 prfB Candidatus Methylomirabilis oxyfera peptide chain release factor 2 (RF-2) YP_003205588.1 575716 D 671143 CDS YP_003205589.1 392373756 13099912 576742..577089 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 577089 13099912 DAMO_0678 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205589.1 576742 D 671143 CDS YP_003205590.1 392373757 13099288 577154..577495 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 577495 13099288 DAMO_0679 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205590.1 577154 D 671143 CDS YP_003205591.1 392373758 13098776 complement(577761..577844) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 577844 13098776 DAMO_0680 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205591.1 577761 R 671143 CDS YP_003205592.1 392373759 13098872 577894..578859 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Peptidase, M23/M37 family 578859 13098872 DAMO_0681 Candidatus Methylomirabilis oxyfera Peptidase, M23/M37 family YP_003205592.1 577894 D 671143 CDS YP_003205593.1 392373760 13098704 579123..581948 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15063851, 2542029; Product type t : transporter; preprotein translocase subunit SecA 581948 secA 13098704 secA Candidatus Methylomirabilis oxyfera preprotein translocase subunit SecA YP_003205593.1 579123 D 671143 CDS YP_003205594.1 392373761 13100221 582079..583227 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 583227 13100221 DAMO_0683 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205594.1 582079 D 671143 CDS YP_003205595.1 392373762 13100038 583230..583553 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 583553 13100038 DAMO_0685 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205595.1 583230 D 671143 CDS YP_003205596.1 392373763 13098512 583556..584389 1 NC_013260.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 584389 13098512 DAMO_0686 Candidatus Methylomirabilis oxyfera nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003205596.1 583556 D 671143 CDS YP_003205597.1 392373764 13098675 584506..585858 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 585858 13098675 DAMO_0687 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205597.1 584506 D 671143 CDS YP_003205598.1 392373765 13099289 complement(585944..586150) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 586150 13099289 DAMO_0689 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205598.1 585944 R 671143 CDS YP_003205599.1 392373766 13099290 complement(586171..586368) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 586368 13099290 DAMO_0690 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205599.1 586171 R 671143 CDS YP_003205600.1 392373767 13099291 complement(586389..586895) 1 NC_013260.1 molybdenum cofactor biosynthesis protein MoaB 586895 moaB 13099291 moaB Candidatus Methylomirabilis oxyfera molybdenum cofactor biosynthesis protein MoaB YP_003205600.1 586389 R 671143 CDS YP_003205601.1 392373768 13099292 complement(587003..587557) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; GTP cyclohydrolase I 587557 folE 13099292 folE Candidatus Methylomirabilis oxyfera GTP cyclohydrolase I YP_003205601.1 587003 R 671143 CDS YP_003205602.1 392373769 13098804 587648..587896 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 587896 13098804 DAMO_0693 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205602.1 587648 D 671143 CDS YP_003205603.1 392373770 13099293 complement(587975..588577) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 588577 13099293 DAMO_0694 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205603.1 587975 R 671143 CDS YP_003205604.1 392373771 13099294 complement(588574..589824) 1 NC_013260.1 6-phosphofructokinase 589824 13099294 DAMO_0695 Candidatus Methylomirabilis oxyfera 6-phosphofructokinase YP_003205604.1 588574 R 671143 CDS YP_003205605.1 392373772 13099296 complement(590020..591531) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 591531 13099296 DAMO_0696 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205605.1 590020 R 671143 CDS YP_003205606.1 392373773 13099297 591710..591916 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 591916 13099297 DAMO_0697 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205606.1 591710 D 671143 CDS YP_003205607.1 392373774 13099298 591931..592635 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7510287; Product type e : enzyme; serine acetyltransferase 592635 cysE 13099298 cysE Candidatus Methylomirabilis oxyfera serine acetyltransferase YP_003205607.1 591931 D 671143 CDS YP_003205608.1 392373775 13098544 complement(592654..593907) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6300111; Product type e : enzyme; glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) 593907 glgC 13098544 glgC Candidatus Methylomirabilis oxyfera glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) YP_003205608.1 592654 R 671143 CDS YP_003205609.1 392373776 13100218 complement(594157..595380) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Electron transfer oxidoreductase 595380 13100218 DAMO_0700 Candidatus Methylomirabilis oxyfera Electron transfer oxidoreductase YP_003205609.1 594157 R 671143 CDS YP_003205610.1 392373777 13099299 complement(595560..596282) 1 NC_013260.1 type 11 methyltransferase 596282 13099299 DAMO_0701 Candidatus Methylomirabilis oxyfera type 11 methyltransferase YP_003205610.1 595560 R 671143 CDS YP_003205611.1 392373778 13099300 complement(596276..597301) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Chalcone and stilbene synthase domain protein 597301 13099300 DAMO_0702 Candidatus Methylomirabilis oxyfera Chalcone and stilbene synthase domain protein YP_003205611.1 596276 R 671143 CDS YP_003205612.1 392373779 13099301 597622..598452 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Sterol 24-C-methyltransferase 598452 13099301 DAMO_0703 Candidatus Methylomirabilis oxyfera Sterol 24-C-methyltransferase YP_003205612.1 597622 D 671143 CDS YP_003205613.1 392373780 13099877 598650..599762 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glycine cleavage system T-protein (aminomethyltransferase) 599762 gcvT 13099877 gcvT Candidatus Methylomirabilis oxyfera glycine cleavage system T-protein (aminomethyltransferase) YP_003205613.1 598650 D 671143 CDS YP_003205614.1 392373781 13099302 599869..600255 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type c : carrier; glycine cleavage system H-protein 600255 gcvH 13099302 gcvH Candidatus Methylomirabilis oxyfera glycine cleavage system H-protein YP_003205614.1 599869 D 671143 CDS YP_003205615.1 392373782 13099303 600255..601604 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; glycine dehydrogenase [decarboxylating] subunit 1 (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) 601604 gcvPA 13099303 gcvPA Candidatus Methylomirabilis oxyfera glycine dehydrogenase [decarboxylating] subunit 1 (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) YP_003205615.1 600255 D 671143 CDS YP_003205616.1 392373783 13100068 601601..603178 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2) 603178 gcvPB 13100068 gcvPB Candidatus Methylomirabilis oxyfera glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2) YP_003205616.1 601601 D 671143 CDS YP_003205617.1 392373784 13100246 complement(603196..603702) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 603702 13100246 DAMO_0708 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205617.1 603196 R 671143 CDS YP_003205618.1 392373785 13099304 complement(603829..603981) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 603981 13099304 DAMO_0709 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205618.1 603829 R 671143 CDS YP_003205619.1 392373786 13099305 complement(603982..604161) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 604161 13099305 DAMO_0710 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205619.1 603982 R 671143 CDS YP_003205620.1 392373787 13099306 complement(604158..604388) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 604388 13099306 DAMO_0711 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205620.1 604158 R 671143 CDS YP_003205621.1 392373788 13099307 complement(604551..604823) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15009896; Product type f : factor; toxin of the YafQ-DinJ toxin-antitoxin system 604823 yafQ 13099307 yafQ Candidatus Methylomirabilis oxyfera toxin of the YafQ-DinJ toxin-antitoxin system YP_003205621.1 604551 R 671143 CDS YP_003205622.1 392373789 13100242 complement(604823..605083) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 99451883; Product type pf : putative factor; antitoxin of YafQ-DinJ toxin-antitoxin system 605083 dinJ 13100242 dinJ Candidatus Methylomirabilis oxyfera antitoxin of YafQ-DinJ toxin-antitoxin system YP_003205622.1 604823 R 671143 CDS YP_003205623.1 392373790 13100239 complement(605312..605665) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 605665 13100239 DAMO_0714 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205623.1 605312 R 671143 CDS YP_003205624.1 392373791 13100240 605976..606770 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10075431, 9244280; Product type e : enzyme; bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase 606770 thiD 13100240 thiD Candidatus Methylomirabilis oxyfera bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase YP_003205624.1 605976 D 671143 CDS YP_003205625.1 392373792 13100241 606804..607499 1 NC_013260.1 endonuclease V 607499 nfi 13100241 nfi Candidatus Methylomirabilis oxyfera endonuclease V YP_003205625.1 606804 D 671143 CDS YP_003205626.1 392373793 13099308 complement(607521..607727) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 607727 13099308 DAMO_0717 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205626.1 607521 R 671143 CDS YP_003205627.1 392373794 13099309 607728..608498 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; 3-oxoacyl-ACP reductase 608498 13099309 DAMO_0718 Candidatus Methylomirabilis oxyfera 3-oxoacyl-ACP reductase YP_003205627.1 607728 D 671143 CDS YP_003205628.1 392373795 13099310 608816..609124 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 609124 13099310 DAMO_0720 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205628.1 608816 D 671143 CDS YP_003205629.1 392373796 13099311 609270..609773 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 609773 13099311 DAMO_0721 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205629.1 609270 D 671143 CDS YP_003205630.1 392373797 13098889 609773..610777 1 NC_013260.1 integrase, catalytic region 610777 13098889 DAMO_0722 Candidatus Methylomirabilis oxyfera integrase, catalytic region YP_003205630.1 609773 D 671143 CDS YP_003205631.1 392373798 13100083 610967..611113 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 611113 13100083 DAMO_0723 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205631.1 610967 D 671143 CDS YP_003205632.1 392373799 13099312 complement(611110..611685) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 611685 13099312 DAMO_0724 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205632.1 611110 R 671143 CDS YP_003205633.1 392373800 13098839 611152..611466 1 NC_013260.1 hypothetical protein 611466 13098839 DAMO_0725 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205633.1 611152 D 671143 CDS YP_003205634.1 392373801 13098596 612308..613069 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 613069 13098596 DAMO_0726 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205634.1 612308 D 671143 CDS YP_003205635.1 392373802 13099313 613250..615076 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 615076 13099313 DAMO_0727 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205635.1 613250 D 671143 CDS YP_003205636.1 392373803 13099314 615452..616396 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 616396 13099314 DAMO_0728 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205636.1 615452 D 671143 CDS YP_003205637.1 392373804 13099315 616506..617192 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 617192 13099315 DAMO_0729 Candidatus Methylomirabilis oxyfera membrane protein YP_003205637.1 616506 D 671143 CDS YP_003205638.1 392373805 13099316 617196..617600 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 617600 13099316 DAMO_0730 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205638.1 617196 D 671143 CDS YP_003205639.1 392373806 13099317 617815..618027 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 618027 13099317 DAMO_0731 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205639.1 617815 D 671143 CDS YP_003205640.1 392373807 13099318 complement(617982..618371) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 618371 13099318 DAMO_0732 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205640.1 617982 R 671143 CDS YP_003205641.1 392373808 13099319 618479..618700 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 618700 13099319 DAMO_0733 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205641.1 618479 D 671143 CDS YP_003205642.1 392373809 13099320 618734..619282 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 619282 13099320 DAMO_0734 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205642.1 618734 D 671143 CDS YP_003205643.1 392373810 13099321 619340..619633 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 619633 13099321 DAMO_0735 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205643.1 619340 D 671143 CDS YP_003205644.1 392373811 13099322 complement(619537..619764) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 619764 13099322 DAMO_0736 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205644.1 619537 R 671143 CDS YP_003205645.1 392373812 13099323 complement(619768..620052) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 620052 13099323 DAMO_0737 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205645.1 619768 R 671143 CDS YP_003205646.1 392373813 13099324 complement(620200..622692) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2645169, 3047129; Product type e : enzyme; glycogen phosphorylase 622692 glgP 13099324 glgP Candidatus Methylomirabilis oxyfera glycogen phosphorylase YP_003205646.1 620200 R 671143 CDS YP_003205647.1 392373814 13099325 complement(622696..623166) 1 NC_013260.1 histidine kinase 623166 13099325 DAMO_0739 Candidatus Methylomirabilis oxyfera histidine kinase YP_003205647.1 622696 R 671143 CDS YP_003205648.1 392373815 13099326 complement(623173..623520) 1 NC_013260.1 Anti-sigma B factor antagonist 623520 13099326 DAMO_0741 Candidatus Methylomirabilis oxyfera Anti-sigma B factor antagonist YP_003205648.1 623173 R 671143 CDS YP_003205649.1 392373816 13099327 complement(623537..623839) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 623839 13099327 DAMO_0742 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205649.1 623537 R 671143 CDS YP_003205650.1 392373817 13099328 complement(623880..627029) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Sensor protein 627029 13099328 DAMO_0743 Candidatus Methylomirabilis oxyfera Sensor protein YP_003205650.1 623880 R 671143 CDS YP_003205651.1 392373818 13099329 complement(627080..628273) 1 NC_013260.1 Response regulator receiver protein 628273 13099329 DAMO_0744 Candidatus Methylomirabilis oxyfera Response regulator receiver protein YP_003205651.1 627080 R 671143 CDS YP_003205652.1 392373819 13099330 complement(628583..629794) 1 NC_013260.1 2-oxoglutarate dehydrogenase complex E2 component 629794 sucB 13099330 sucB Candidatus Methylomirabilis oxyfera 2-oxoglutarate dehydrogenase complex E2 component YP_003205652.1 628583 R 671143 CDS YP_003205653.1 392373820 13099331 complement(629804..630775) 1 NC_013260.1 2-oxoisovalerate dehydrogenase subunit beta (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) 630775 bfmBAB 13099331 bfmBAB Candidatus Methylomirabilis oxyfera 2-oxoisovalerate dehydrogenase subunit beta (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta) YP_003205653.1 629804 R 671143 CDS YP_003205654.1 392373821 13099332 complement(630810..631781) 1 NC_013260.1 pyruvate dehydrogenase (Lipoamide) E1 component alpha chain 631781 pdhA 13099332 pdhA Candidatus Methylomirabilis oxyfera pyruvate dehydrogenase (Lipoamide) E1 component alpha chain YP_003205654.1 630810 R 671143 CDS YP_003205655.1 392373822 13100247 632487..634316 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 634316 13100247 DAMO_0749 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205655.1 632487 D 671143 CDS YP_003205656.1 392373823 13099333 634542..636026 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; proteasome component 636026 13099333 DAMO_0750 Candidatus Methylomirabilis oxyfera proteasome component YP_003205656.1 634542 D 671143 CDS YP_003205657.1 392373824 13099334 636056..636907 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; proteasome A-type and B-type 636907 13099334 DAMO_0751 Candidatus Methylomirabilis oxyfera proteasome A-type and B-type YP_003205657.1 636056 D 671143 CDS YP_003205658.1 392373825 13099335 636907..637602 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; proteasome A-type and B-type 637602 13099335 DAMO_0752 Candidatus Methylomirabilis oxyfera proteasome A-type and B-type YP_003205658.1 636907 D 671143 CDS YP_003205659.1 392373826 13099336 637714..639072 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 639072 13099336 DAMO_0753 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205659.1 637714 D 671143 CDS YP_003205660.1 392373827 13099337 639246..640766 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme; cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA 640766 13099337 DAMO_0754 Candidatus Methylomirabilis oxyfera cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA YP_003205660.1 639246 D 671143 CDS YP_003205661.1 392373828 13098823 complement(640777..641007) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 641007 13098823 DAMO_0755 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205661.1 640777 R 671143 CDS YP_003205662.1 392373829 13100013 641172..642395 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member 642395 13100013 DAMO_0756 Candidatus Methylomirabilis oxyfera transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member YP_003205662.1 641172 D 671143 CDS YP_003205663.1 392373830 13098637 642530..643441 1 NC_013260.1 hypothetical protein 643441 13098637 DAMO_0757 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205663.1 642530 D 671143 CDS YP_003205664.1 392373831 13099338 643626..644339 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 644339 13099338 DAMO_0758 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205664.1 643626 D 671143 CDS YP_003205665.1 392373832 13099339 644506..645417 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 645417 13099339 DAMO_0759 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205665.1 644506 D 671143 CDS YP_003205666.1 392373833 13099340 645565..646476 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 646476 13099340 DAMO_0761 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205666.1 645565 D 671143 CDS YP_003205667.1 392373834 13099341 646477..646569 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 646569 13099341 DAMO_0762 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205667.1 646477 D 671143 CDS YP_003205668.1 392373835 13099342 646591..647502 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 647502 13099342 DAMO_0764 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205668.1 646591 D 671143 CDS YP_003205669.1 392373836 13099343 647609..648427 1 NC_013260.1 hypothetical protein 648427 13099343 DAMO_0765 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205669.1 647609 D 671143 CDS YP_003205670.1 392373837 13099344 648858..650855 1 NC_013260.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 650855 13099344 DAMO_0766 Candidatus Methylomirabilis oxyfera FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003205670.1 648858 D 671143 CDS YP_003205671.1 392373838 13099345 650830..651348 1 NC_013260.1 rieske (2Fe-2S) domain protein 651348 13099345 DAMO_0767 Candidatus Methylomirabilis oxyfera rieske (2Fe-2S) domain protein YP_003205671.1 650830 D 671143 CDS YP_003205672.1 392373839 13099346 651453..652934 1 NC_013260.1 menaquinol-cytochrome c reductase cytochrome b subunit 652934 13099346 DAMO_0768 Candidatus Methylomirabilis oxyfera menaquinol-cytochrome c reductase cytochrome b subunit YP_003205672.1 651453 D 671143 CDS YP_003205673.1 392373840 13099347 652987..653778 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; tetraheme c type cytochrome, part of bc1 complex, complex III 653778 13099347 DAMO_0769 Candidatus Methylomirabilis oxyfera tetraheme c type cytochrome, part of bc1 complex, complex III YP_003205673.1 652987 D 671143 CDS YP_003205674.1 392373841 13099348 653909..654145 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 654145 13099348 DAMO_0770 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205674.1 653909 D 671143 CDS YP_003205675.1 392373842 13099349 complement(654473..654748) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 654748 13099349 DAMO_0771 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205675.1 654473 R 671143 CDS YP_003205676.1 392373843 13099350 complement(654723..655001) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 655001 13099350 DAMO_0772 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205676.1 654723 R 671143 CDS YP_003205677.1 392373844 13099351 complement(655034..656080) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; C4-dicarboxylate transporter 656080 13099351 DAMO_0773 Candidatus Methylomirabilis oxyfera C4-dicarboxylate transporter YP_003205677.1 655034 R 671143 CDS YP_003205678.1 392373845 13099352 complement(656175..656858) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; nitrate reductase subunit gamma 656858 narI 13099352 narI Candidatus Methylomirabilis oxyfera nitrate reductase subunit gamma YP_003205678.1 656175 R 671143 CDS YP_003205679.1 392373846 13099353 complement(656868..657767) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type f : factor; protein necessary for nitrate reductase assembly (narJ) 657767 narJ 13099353 narJ Candidatus Methylomirabilis oxyfera protein necessary for nitrate reductase assembly (narJ) YP_003205679.1 656868 R 671143 CDS YP_003205680.1 392373847 13099354 complement(657761..659290) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; nitrate reductase subunit beta 659290 narH 13099354 narH Candidatus Methylomirabilis oxyfera nitrate reductase subunit beta YP_003205680.1 657761 R 671143 CDS YP_003205681.1 392373848 13099355 complement(659315..659896) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 659896 13099355 DAMO_0777 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205681.1 659315 R 671143 CDS YP_003205682.1 392373849 13099356 complement(659904..663554) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; nitrate reductase subunit alpha 663554 narG 13099356 narG Candidatus Methylomirabilis oxyfera nitrate reductase subunit alpha YP_003205682.1 659904 R 671143 CDS YP_003205683.1 392373850 13099357 complement(663554..664819) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 664819 13099357 DAMO_0779 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205683.1 663554 R 671143 CDS YP_003205684.1 392373851 13099358 665110..666372 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 666372 13099358 DAMO_0780 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205684.1 665110 D 671143 CDS YP_003205685.1 392373852 13099359 666769..667611 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 667611 13099359 DAMO_0781 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205685.1 666769 D 671143 CDS YP_003205686.1 392373853 13099441 complement(667680..667925) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 667925 13099441 DAMO_0782 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205686.1 667680 R 671143 CDS YP_003205687.1 392373854 13098592 complement(668100..668462) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 668462 13098592 DAMO_0783 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205687.1 668100 R 671143 CDS YP_003205688.1 392373855 13098593 complement(668459..668917) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 668917 13098593 DAMO_0784 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205688.1 668459 R 671143 CDS YP_003205689.1 392373856 13098591 complement(668908..669189) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 669189 13098591 DAMO_0785 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205689.1 668908 R 671143 CDS YP_003205690.1 392373857 13099442 complement(669321..669443) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 669443 13099442 DAMO_0787 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205690.1 669321 R 671143 CDS YP_003205691.1 392373858 13098590 complement(669523..669729) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 669729 13098590 DAMO_0788 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205691.1 669523 R 671143 CDS YP_003205692.1 392373859 13099443 complement(669902..670288) 1 NC_013260.1 PilT-like protein 670288 13099443 DAMO_0789 Candidatus Methylomirabilis oxyfera PilT-like protein YP_003205692.1 669902 R 671143 CDS YP_003205693.1 392373860 13099444 complement(670285..670530) 1 NC_013260.1 prevent-host-death family protein 670530 13099444 DAMO_0790 Candidatus Methylomirabilis oxyfera prevent-host-death family protein YP_003205693.1 670285 R 671143 CDS YP_003205694.1 392373861 13099445 complement(670687..670899) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 670899 13099445 DAMO_0792 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205694.1 670687 R 671143 CDS YP_003205695.1 392373862 13099446 670885..671076 1 NC_013260.1 hypothetical protein 671076 13099446 DAMO_0793 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205695.1 670885 D 671143 CDS YP_003205696.1 392373863 13099447 671186..671320 1 NC_013260.1 hypothetical protein 671320 13099447 DAMO_0794 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205696.1 671186 D 671143 CDS YP_003205697.1 392373864 13099448 671672..672421 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 672421 13099448 DAMO_0795 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205697.1 671672 D 671143 CDS YP_003205698.1 392373865 13099449 complement(672443..672736) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 672736 13099449 DAMO_0796 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205698.1 672443 R 671143 CDS YP_003205699.1 392373866 13099450 complement(673157..674032) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 674032 13099450 DAMO_0797 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205699.1 673157 R 671143 CDS YP_003205700.1 392373867 13099451 674018..674227 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 674227 13099451 DAMO_0798 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205700.1 674018 D 671143 CDS YP_003205701.1 392373868 13099452 complement(674158..674793) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 674793 13099452 DAMO_0799 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205701.1 674158 R 671143 CDS YP_003205702.1 392373869 13099453 674817..674882 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 674882 13099453 DAMO_0800 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205702.1 674817 D 671143 CDS YP_003205703.1 392373870 13099454 complement(674918..676321) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; cytochrome c oxidase, subunit I 676321 13099454 DAMO_0801 Candidatus Methylomirabilis oxyfera cytochrome c oxidase, subunit I YP_003205703.1 674918 R 671143 CDS YP_003205704.1 392373871 13099455 complement(676355..676912) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; cytochrome c oxidase, subunit II 676912 13099455 DAMO_0802 Candidatus Methylomirabilis oxyfera cytochrome c oxidase, subunit II YP_003205704.1 676355 R 671143 CDS YP_003205705.1 392373872 13099456 complement(676998..677264) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 677264 13099456 DAMO_0803 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205705.1 676998 R 671143 CDS YP_003205706.1 392373873 13099457 complement(677300..678214) 1 NC_013260.1 LysR family transcriptional regulator 678214 13099457 DAMO_0804 Candidatus Methylomirabilis oxyfera LysR family transcriptional regulator YP_003205706.1 677300 R 671143 CDS YP_003205707.1 392373874 13099458 complement(678225..679271) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase, group 1 679271 13099458 DAMO_0805 Candidatus Methylomirabilis oxyfera Glycosyl transferase, group 1 YP_003205707.1 678225 R 671143 CDS YP_003205708.1 392373875 13099459 complement(679280..681289) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 681289 13099459 DAMO_0806 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205708.1 679280 R 671143 CDS YP_003205709.1 392373876 13099460 complement(681286..682779) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) 682779 gatB 13099460 gatB Candidatus Methylomirabilis oxyfera Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) YP_003205709.1 681286 R 671143 CDS YP_003205710.1 392373877 13099461 complement(682794..683237) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 683237 13099461 DAMO_0808 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205710.1 682794 R 671143 CDS YP_003205711.1 392373878 13099462 complement(683242..683655) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 683655 13099462 DAMO_0809 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205711.1 683242 R 671143 CDS YP_003205712.1 392373879 13099463 complement(683657..685117) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) 685117 gatA 13099463 gatA Candidatus Methylomirabilis oxyfera glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) YP_003205712.1 683657 R 671143 CDS YP_003205713.1 392373880 13099464 complement(685122..685412) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glutamyl-tRNA(Gln) amidotransferase subunit C 685412 gatC 13099464 gatC Candidatus Methylomirabilis oxyfera glutamyl-tRNA(Gln) amidotransferase subunit C YP_003205713.1 685122 R 671143 CDS YP_003205714.1 392373881 13099465 complement(685432..687621) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10388562, 6324092, 6379604; Product type e : enzyme; DNA helicase II 687621 uvrD 13099465 uvrD Candidatus Methylomirabilis oxyfera DNA helicase II YP_003205714.1 685432 R 671143 CDS YP_003205715.1 392373882 13099466 688018..688281 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 688281 13099466 DAMO_0813 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205715.1 688018 D 671143 CDS YP_003205716.1 392373883 13099467 688278..688679 1 NC_013260.1 PilT-like protein protein 688679 13099467 DAMO_0814 Candidatus Methylomirabilis oxyfera PilT-like protein protein YP_003205716.1 688278 D 671143 CDS YP_003205717.1 392373884 13099468 688747..688923 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 688923 13099468 DAMO_0815 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205717.1 688747 D 671143 CDS YP_003205718.1 392373885 13100237 688913..689551 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 689551 13100237 DAMO_0816 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205718.1 688913 D 671143 CDS YP_003205719.1 392373886 13099469 689691..690692 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 690692 13099469 DAMO_0818 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205719.1 689691 D 671143 CDS YP_003205720.1 392373887 13099470 690728..693127 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 693127 13099470 DAMO_0819 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205720.1 690728 D 671143 CDS YP_003205721.1 392373888 13100236 693257..693709 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Plastoquinol--plastocyanin reductase 693709 13100236 DAMO_0820 Candidatus Methylomirabilis oxyfera Plastoquinol--plastocyanin reductase YP_003205721.1 693257 D 671143 CDS YP_003205722.1 392373889 13100238 693715..694803 1 NC_013260.1 cytochrome bc complex cytochrome b subunit 694803 petB 13100238 petB Candidatus Methylomirabilis oxyfera cytochrome bc complex cytochrome b subunit YP_003205722.1 693715 D 671143 CDS YP_003205723.1 392373890 13098882 694811..696079 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 696079 13098882 DAMO_0822 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205723.1 694811 D 671143 CDS YP_003205724.1 392373891 13099471 696362..696736 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 696736 13099471 DAMO_0824 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205724.1 696362 D 671143 CDS YP_003205725.1 392373892 13099472 696844..698991 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Cytochrome b subunit of formate dehydrogenase-like protein 698991 13099472 DAMO_0825 Candidatus Methylomirabilis oxyfera Cytochrome b subunit of formate dehydrogenase-like protein YP_003205725.1 696844 D 671143 CDS YP_003205726.1 392373893 13099473 699006..701204 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 701204 13099473 DAMO_0826 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205726.1 699006 D 671143 CDS YP_003205727.1 392373894 13099474 701270..701815 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 701815 13099474 DAMO_0828 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205727.1 701270 D 671143 CDS YP_003205728.1 392373895 13099475 complement(701435..701656) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 701656 13099475 DAMO_0827 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205728.1 701435 R 671143 CDS YP_003205729.1 392373896 13099476 701913..702875 1 NC_013260.1 ribonuclease T2 702875 13099476 DAMO_0829 Candidatus Methylomirabilis oxyfera ribonuclease T2 YP_003205729.1 701913 D 671143 CDS YP_003205730.1 392373897 13099477 702951..703697 1 NC_013260.1 Esterase/lipase/thioesterase family active site 703697 TGL 13099477 TGL Candidatus Methylomirabilis oxyfera Esterase/lipase/thioesterase family active site YP_003205730.1 702951 D 671143 CDS YP_003205731.1 392373898 13098643 703754..704287 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 704287 13098643 DAMO_0831 Candidatus Methylomirabilis oxyfera membrane protein YP_003205731.1 703754 D 671143 CDS YP_003205732.1 392373899 13099478 704176..705186 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 705186 13099478 DAMO_0832 Candidatus Methylomirabilis oxyfera membrane protein YP_003205732.1 704176 D 671143 CDS YP_003205733.1 392373900 13099479 complement(705237..705554) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 705554 13099479 DAMO_0833 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205733.1 705237 R 671143 CDS YP_003205734.1 392373901 13099480 706003..706734 1 NC_013260.1 CDP-diacylglycerol-choline O-phosphatidyltransferase 706734 13099480 DAMO_0834 Candidatus Methylomirabilis oxyfera CDP-diacylglycerol-choline O-phosphatidyltransferase YP_003205734.1 706003 D 671143 CDS YP_003205735.1 392373902 13099481 complement(706726..707676) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 707676 13099481 DAMO_0835 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205735.1 706726 R 671143 CDS YP_003205736.1 392373903 13099483 complement(707673..709286) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; gliding motility ABC transporter auxillary protein 709286 13099483 DAMO_0836 Candidatus Methylomirabilis oxyfera gliding motility ABC transporter auxillary protein YP_003205736.1 707673 R 671143 CDS YP_003205737.1 392373904 13099482 complement(709274..710041) 1 NC_013260.1 multi-copper enzyme maturation ABC transporter permease 710041 13099482 DAMO_0837 Candidatus Methylomirabilis oxyfera multi-copper enzyme maturation ABC transporter permease YP_003205737.1 709274 R 671143 CDS YP_003205738.1 392373905 13099484 complement(710038..711024) 1 NC_013260.1 ABC transporter 711024 13099484 DAMO_0838 Candidatus Methylomirabilis oxyfera ABC transporter YP_003205738.1 710038 R 671143 CDS YP_003205739.1 392373906 13098836 complement(711140..712030) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 712030 13098836 DAMO_0839 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205739.1 711140 R 671143 CDS YP_003205740.1 392373907 13099485 complement(712065..713123) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 713123 13099485 DAMO_0840 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205740.1 712065 R 671143 CDS YP_003205741.1 392373908 13099486 complement(713107..713703) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 713703 13099486 DAMO_0841 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205741.1 713107 R 671143 CDS YP_003205742.1 392373909 13099487 713883..714098 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 714098 13099487 DAMO_0842 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205742.1 713883 D 671143 CDS YP_003205743.1 392373910 13099488 714104..714703 1 NC_013260.1 type-2 restriction enzyme MunI (R.MunI) (Type II restriction enzyme MunI) (Endonuclease MunI) 714703 munIR 13099488 munIR Candidatus Methylomirabilis oxyfera type-2 restriction enzyme MunI (R.MunI) (Type II restriction enzyme MunI) (Endonuclease MunI) YP_003205743.1 714104 D 671143 CDS YP_003205744.1 392373911 13099489 complement(714684..715427) 1 NC_013260.1 modification methylase MunI (Adenine-specific methyltransferase MunI) (M.MunI) 715427 munIM 13099489 munIM Candidatus Methylomirabilis oxyfera modification methylase MunI (Adenine-specific methyltransferase MunI) (M.MunI) YP_003205744.1 714684 R 671143 CDS YP_003205745.1 392373912 13099490 complement(715414..715662) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 715662 13099490 DAMO_0845 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205745.1 715414 R 671143 CDS YP_003205746.1 392373913 13099491 715555..715782 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 715782 13099491 DAMO_0846 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205746.1 715555 D 671143 CDS YP_003205747.1 392373914 13099492 715857..716441 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 716441 13099492 DAMO_0847 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205747.1 715857 D 671143 CDS YP_003205748.1 392373915 13099493 716431..716697 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 716697 13099493 DAMO_0848 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205748.1 716431 D 671143 CDS YP_003205750.1 392373917 13099495 complement(717093..718562) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; exoribonuclease II 718562 rnb 13099495 rnb Candidatus Methylomirabilis oxyfera exoribonuclease II YP_003205750.1 717093 R 671143 CDS YP_003205751.1 392373918 13099496 complement(718559..718852) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 718852 13099496 DAMO_0851 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205751.1 718559 R 671143 CDS YP_003205752.1 392373919 13098567 complement(718849..719082) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 719082 13098567 DAMO_0852 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205752.1 718849 R 671143 CDS YP_003205753.1 392373920 13098566 complement(719189..721888) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; formate dehydrogenase, alpha subunit (fdhA2) 721888 fdhA 13098566 fdhA Candidatus Methylomirabilis oxyfera formate dehydrogenase, alpha subunit (fdhA2) YP_003205753.1 719189 R 671143 CDS YP_003205754.1 392373921 13099497 complement(721891..724023) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; dehydrogenase 724023 13099497 DAMO_0854 Candidatus Methylomirabilis oxyfera dehydrogenase YP_003205754.1 721891 R 671143 CDS YP_003205755.1 392373922 13099498 723622..723885 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 723885 13099498 DAMO_0855 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205755.1 723622 D 671143 CDS YP_003205756.1 392373923 13099499 724398..724631 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; AsnC family transcriptional regulator 724631 13099499 DAMO_0856 Candidatus Methylomirabilis oxyfera AsnC family transcriptional regulator YP_003205756.1 724398 D 671143 CDS YP_003205757.1 392373924 13099500 724891..725106 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 725106 13099500 DAMO_0857 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205757.1 724891 D 671143 CDS YP_003205758.1 392373925 13099501 725206..725511 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 725511 13099501 DAMO_0858 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205758.1 725206 D 671143 CDS YP_003205759.1 392373926 13098734 725463..726680 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator; Nitrogen assimilation transcription regulation protein (ntrB) (synonyms:glnR, glnL) 726680 13098734 DAMO_0859 Candidatus Methylomirabilis oxyfera Nitrogen assimilation transcription regulation protein (ntrB) (synonyms:glnR, glnL) YP_003205759.1 725463 D 671143 CDS YP_003205760.1 392373927 13099502 726677..728140 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator; Nitrogen assimilation transcription regulatory protein (ntrC)(synonyms:glnT, glnG) 728140 13099502 DAMO_0860 Candidatus Methylomirabilis oxyfera Nitrogen assimilation transcription regulatory protein (ntrC)(synonyms:glnT, glnG) YP_003205760.1 726677 D 671143 CDS YP_003205761.1 392373928 13099503 complement(728182..729120) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator; LysR family transcriptional regulator 729120 13099503 DAMO_0861 Candidatus Methylomirabilis oxyfera LysR family transcriptional regulator YP_003205761.1 728182 R 671143 CDS YP_003205762.1 392373929 13100190 729310..730245 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) (ade1/pur7). Catalyses ATP+5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxylate+L-aspartate<=>ADP+phosphate+(S)-2-(5-amino-1- (5-phospho-D-ribosyl)imidazole-4-carboxami 730245 13100190 DAMO_0862 Candidatus Methylomirabilis oxyfera phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) (ade1/pur7). Catalyses ATP+5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxylate+L-aspartate<=>ADP+phosphate+(S)-2-(5-amino-1- (5-phospho-D-ribosyl)imidazole-4-carboxami YP_003205762.1 729310 D 671143 CDS YP_003205763.1 392373930 13099504 730281..730550 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 730550 13099504 DAMO_0863 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205763.1 730281 D 671143 CDS YP_003205764.1 392373931 13099505 complement(730614..730937) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; nirD (nasD) assimilatory nitrite reductase, small subunit (Rieske (2Fe-2S) domain) protein 730937 13099505 DAMO_0864 Candidatus Methylomirabilis oxyfera nirD (nasD) assimilatory nitrite reductase, small subunit (Rieske (2Fe-2S) domain) protein YP_003205764.1 730614 R 671143 CDS YP_003205765.1 392373932 13099506 complement(730941..733364) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; nirB (nasB) assimilatory nitrite reductase, large subunit [NAD(P)H] 733364 13099506 DAMO_0865 Candidatus Methylomirabilis oxyfera nirB (nasB) assimilatory nitrite reductase, large subunit [NAD(P)H] YP_003205765.1 730941 R 671143 CDS YP_003205766.1 392373933 13099507 complement(733790..735235) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glutamate synthase [NADPH] small chain 735235 gltD 13099507 gltD Candidatus Methylomirabilis oxyfera glutamate synthase [NADPH] small chain YP_003205766.1 733790 R 671143 CDS YP_003205767.1 392373934 13099508 complement(735228..739817) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glutamate synthase [NADPH] large chain 739817 gltB 13099508 gltB Candidatus Methylomirabilis oxyfera glutamate synthase [NADPH] large chain YP_003205767.1 735228 R 671143 CDS YP_003205768.1 392373935 13099509 complement(739851..740003) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 740003 13099509 DAMO_0868 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205768.1 739851 R 671143 CDS YP_003205769.1 392373936 13099510 740152..742590 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Peptidoglycan glycosyltransferase 742590 13099510 DAMO_0869 Candidatus Methylomirabilis oxyfera Peptidoglycan glycosyltransferase YP_003205769.1 740152 D 671143 CDS YP_003205770.1 392373937 13099511 742580..743947 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 743947 13099511 DAMO_0870 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205770.1 742580 D 671143 CDS YP_003205771.1 392373938 13099512 744365..744652 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 744652 13099512 DAMO_0871 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205771.1 744365 D 671143 CDS YP_003205772.1 392373939 13099513 complement(744729..745517) 1 NC_013260.1 Alpha/beta hydrolase fold 745517 13099513 DAMO_0872 Candidatus Methylomirabilis oxyfera Alpha/beta hydrolase fold YP_003205772.1 744729 R 671143 CDS YP_003205773.1 392373940 13099514 complement(745602..746204) 1 NC_013260.1 3-isopropylmalate dehydratase small subunit (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) 746204 leuD 13099514 leuD Candidatus Methylomirabilis oxyfera 3-isopropylmalate dehydratase small subunit (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) YP_003205773.1 745602 R 671143 CDS YP_003205774.1 392373941 13099515 complement(746201..747604) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) 747604 leuC 13099515 leuC Candidatus Methylomirabilis oxyfera 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) YP_003205774.1 746201 R 671143 CDS YP_003205775.1 392373942 13098403 747848..748219 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 748219 13098403 DAMO_0875 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205775.1 747848 D 671143 CDS YP_003205777.1 392373944 13099516 complement(748251..748469) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 748469 13099516 DAMO_0877 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205777.1 748251 R 671143 CDS YP_003205778.1 392373945 13099517 748559..748849 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 748849 13099517 DAMO_0878 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205778.1 748559 D 671143 CDS YP_003205779.1 392373946 13099518 complement(748957..749403) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 749403 13099518 DAMO_0879 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205779.1 748957 R 671143 CDS YP_003205780.1 392373947 13099519 complement(749723..750130) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 750130 13099519 DAMO_0880 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205780.1 749723 R 671143 CDS YP_003205781.1 392373948 13099520 750106..750282 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 750282 13099520 DAMO_0881 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205781.1 750106 D 671143 CDS YP_003205782.1 392373949 13098502 750557..751291 1 NC_013260.1 short-chain dehydrogenase 751291 13098502 DAMO_0882 Candidatus Methylomirabilis oxyfera short-chain dehydrogenase YP_003205782.1 750557 D 671143 CDS YP_003205783.1 392373950 13098501 751310..751987 1 NC_013260.1 Beta-lactamase-like 751987 13098501 DAMO_0883 Candidatus Methylomirabilis oxyfera Beta-lactamase-like YP_003205783.1 751310 D 671143 CDS YP_003205784.1 392373951 13099521 751980..753143 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 753143 13099521 DAMO_0884 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205784.1 751980 D 671143 CDS YP_003205785.1 392373952 13099603 753233..753763 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; DNA-methyltransferase 753763 13099603 DAMO_0885 Candidatus Methylomirabilis oxyfera DNA-methyltransferase YP_003205785.1 753233 D 671143 CDS YP_003205786.1 392373953 13099605 754387..754653 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 754653 13099605 DAMO_0886 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205786.1 754387 D 671143 CDS YP_003205787.1 392373954 13099606 754625..756007 1 NC_013260.1 transcriptional regulatory protein zraR 756007 zraR 13099606 zraR Candidatus Methylomirabilis oxyfera transcriptional regulatory protein zraR YP_003205787.1 754625 D 671143 CDS YP_003205788.1 392373955 13099607 complement(756100..756168) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 756168 13099607 DAMO_0888 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205788.1 756100 R 671143 CDS YP_003205789.1 392373956 13099608 756611..757408 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 757408 13099608 DAMO_0889 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205789.1 756611 D 671143 CDS YP_003205790.1 392373957 13099609 757426..758508 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 758508 13099609 DAMO_0890 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205790.1 757426 D 671143 CDS YP_003205791.1 392373958 13099610 758686..760851 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 760851 13099610 DAMO_0891 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205791.1 758686 D 671143 CDS YP_003205792.1 392373959 13099611 761143..762057 1 NC_013260.1 peptidase C1A, papain 762057 13099611 DAMO_0892 Candidatus Methylomirabilis oxyfera peptidase C1A, papain YP_003205792.1 761143 D 671143 CDS YP_003205793.1 392373960 13099612 762066..762239 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 762239 13099612 DAMO_0893 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205793.1 762066 D 671143 CDS YP_003205794.1 392373961 13099758 762364..762750 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 762750 13099758 DAMO_0894 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205794.1 762364 D 671143 CDS YP_003205795.1 392373962 13099613 762776..763831 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 763831 13099613 DAMO_0895 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205795.1 762776 D 671143 CDS YP_003205796.1 392373963 13098914 763843..764115 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 764115 13098914 DAMO_0896 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205796.1 763843 D 671143 CDS YP_003205797.1 392373964 13099614 764094..764816 1 NC_013260.1 ubiquinone/menaquinone biosynthesis methyltransferase ubiE 764816 ubiE 13099614 ubiE Candidatus Methylomirabilis oxyfera ubiquinone/menaquinone biosynthesis methyltransferase ubiE YP_003205797.1 764094 D 671143 CDS YP_003205798.1 392373965 13099615 764813..765685 1 NC_013260.1 4-hydroxybenzoate polyprenyltransferase-related protein 765685 13099615 DAMO_0898 Candidatus Methylomirabilis oxyfera 4-hydroxybenzoate polyprenyltransferase-related protein YP_003205798.1 764813 D 671143 CDS YP_003205799.1 392373966 13099616 765830..766084 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 766084 13099616 DAMO_0899 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205799.1 765830 D 671143 CDS YP_003205800.1 392373967 13099618 766244..766504 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 766504 13099618 DAMO_0900 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205800.1 766244 D 671143 CDS YP_003205801.1 392373968 13099619 766900..767217 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 767217 13099619 DAMO_0901 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205801.1 766900 D 671143 CDS YP_003205802.1 392373969 13099620 767177..767689 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 767689 13099620 DAMO_0902 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205802.1 767177 D 671143 CDS YP_003205803.1 392373970 13099621 767738..767860 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 767860 13099621 DAMO_0903 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205803.1 767738 D 671143 CDS YP_003205804.1 392373971 13099622 767916..768926 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 768926 13099622 DAMO_0904 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205804.1 767916 D 671143 CDS YP_003205805.1 392373972 13098878 769004..769852 1 NC_013260.1 hypothetical protein 769852 13098878 DAMO_0905 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205805.1 769004 D 671143 CDS YP_003205806.1 392373973 13099623 complement(769879..770673) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 7692217, 8626291; Product type pt : putative transporter; O-antigen/LPS export system ATP-binding protein 770673 13099623 DAMO_0906 Candidatus Methylomirabilis oxyfera O-antigen/LPS export system ATP-binding protein YP_003205806.1 769879 R 671143 CDS YP_003205807.1 392373974 13099624 complement(770721..771548) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; O-antigen export system permease protein rfbA 771548 13099624 DAMO_0907 Candidatus Methylomirabilis oxyfera O-antigen export system permease protein rfbA YP_003205807.1 770721 R 671143 CDS YP_003205808.1 392373975 13099876 771840..772826 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10065558; Product type e : enzyme; GDP-mannose 4,6-dehydratase 772826 gmd 13099876 gmd Candidatus Methylomirabilis oxyfera GDP-mannose 4,6-dehydratase YP_003205808.1 771840 D 671143 CDS YP_003205809.1 392373976 13099625 772953..773477 1 NC_013260.1 dTDP-4-dehydrorhamnose 3,5-epimerase 773477 13099625 DAMO_0909 Candidatus Methylomirabilis oxyfera dTDP-4-dehydrorhamnose 3,5-epimerase YP_003205809.1 772953 D 671143 CDS YP_003205810.1 392373977 13099626 773490..774335 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 774335 13099626 DAMO_0910 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205810.1 773490 D 671143 CDS YP_003205811.1 392373978 13099627 774534..774746 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 774746 13099627 DAMO_0911 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205811.1 774534 D 671143 CDS YP_003205812.1 392373979 13099628 774713..775657 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 9862812; Product type e : enzyme; bifunctional GDP-fucose synthetase/GDP-4-dehydro-6-deoxy-D-mannose epimerase/GDP-4-dehydro-6-L-deoxygalactose reductase 775657 fcl 13099628 fcl Candidatus Methylomirabilis oxyfera bifunctional GDP-fucose synthetase/GDP-4-dehydro-6-deoxy-D-mannose epimerase/GDP-4-dehydro-6-L-deoxygalactose reductase YP_003205812.1 774713 D 671143 CDS YP_003205813.1 392373980 13099629 775792..776214 1 NC_013260.1 DNA polymerase, beta domain-containing protein region 776214 13099629 DAMO_0913 Candidatus Methylomirabilis oxyfera DNA polymerase, beta domain-containing protein region YP_003205813.1 775792 D 671143 CDS YP_003205814.1 392373981 13099630 776347..776619 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 776619 13099630 DAMO_0914 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205814.1 776347 D 671143 CDS YP_003205815.1 392373982 13099631 776704..776943 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; HEPN domain protein 776943 13099631 DAMO_0915 Candidatus Methylomirabilis oxyfera HEPN domain protein YP_003205815.1 776704 D 671143 CDS YP_003205816.1 392373983 13099632 777068..777856 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 777856 13099632 DAMO_0916 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205816.1 777068 D 671143 CDS YP_003205817.1 392373984 13098408 777972..778829 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Sulfotransferase domain superfamily 778829 13098408 DAMO_0917 Candidatus Methylomirabilis oxyfera Sulfotransferase domain superfamily YP_003205817.1 777972 D 671143 CDS YP_003205818.1 392373985 13099633 778826..780385 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 780385 13099633 DAMO_0918 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205818.1 778826 D 671143 CDS YP_003205819.1 392373986 13099634 780445..781686 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 781686 13099634 DAMO_0919 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205819.1 780445 D 671143 CDS YP_003205820.1 392373987 13099635 781887..783224 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 783224 13099635 DAMO_0920 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205820.1 781887 D 671143 CDS YP_003205821.1 392373988 13100189 783366..783833 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 783833 13100189 DAMO_0921 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205821.1 783366 D 671143 CDS YP_003205822.1 392373989 13099636 784074..784313 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 784313 13099636 DAMO_0922 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205822.1 784074 D 671143 CDS YP_003205823.1 392373990 13099637 784425..784670 1 NC_013260.1 Genome sequencing data, contig C328 784670 13099637 DAMO_0923 Candidatus Methylomirabilis oxyfera Genome sequencing data, contig C328 YP_003205823.1 784425 D 671143 CDS YP_003205824.1 392373991 13099638 784680..784898 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 784898 13099638 DAMO_0924 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205824.1 784680 D 671143 CDS YP_003205825.1 392373992 13099639 784895..785059 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 785059 13099639 DAMO_0925 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205825.1 784895 D 671143 CDS YP_003205826.1 392373993 13099640 785216..786172 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 786172 13099640 DAMO_0926 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205826.1 785216 D 671143 CDS YP_003205827.1 392373994 13099641 786226..786798 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 786798 13099641 DAMO_0927 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205827.1 786226 D 671143 CDS YP_003205828.1 392373995 13099642 787462..789072 1 NC_013260.1 glycosyl transferase, family 2 789072 13099642 DAMO_0928 Candidatus Methylomirabilis oxyfera glycosyl transferase, family 2 YP_003205828.1 787462 D 671143 CDS YP_003205829.1 392373996 13099643 789180..790439 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 790439 13099643 DAMO_0929 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205829.1 789180 D 671143 CDS YP_003205830.1 392373997 13099644 792396..793259 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 793259 13099644 DAMO_0930 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205830.1 792396 D 671143 CDS YP_003205831.1 392373998 13099645 793261..793998 1 NC_013260.1 methyltransferase 24 793998 13099645 DAMO_0931 Candidatus Methylomirabilis oxyfera methyltransferase 24 YP_003205831.1 793261 D 671143 CDS YP_003205832.1 392373999 13099646 793995..794936 1 NC_013260.1 glycosyltransferase 794936 ykcC 13099646 ykcC Candidatus Methylomirabilis oxyfera glycosyltransferase YP_003205832.1 793995 D 671143 CDS YP_003205833.1 392374000 13099647 794953..795909 1 NC_013260.1 NAD-dependent epimerase/dehydratase 795909 13099647 DAMO_0933 Candidatus Methylomirabilis oxyfera NAD-dependent epimerase/dehydratase YP_003205833.1 794953 D 671143 CDS YP_003205834.1 392374001 13099648 795947..796825 1 NC_013260.1 short-chain alcohol dehydrogenase 796825 13099648 DAMO_0934 Candidatus Methylomirabilis oxyfera short-chain alcohol dehydrogenase YP_003205834.1 795947 D 671143 CDS YP_003205835.1 392374002 13099649 796827..797804 1 NC_013260.1 Oxidoreductase domain protein 797804 13099649 DAMO_0935 Candidatus Methylomirabilis oxyfera Oxidoreductase domain protein YP_003205835.1 796827 D 671143 CDS YP_003205836.1 392374003 13099650 complement(797831..798265) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 798265 13099650 DAMO_0936 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205836.1 797831 R 671143 CDS YP_003205837.1 392374004 13099651 797838..798038 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 798038 13099651 DAMO_0937 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205837.1 797838 D 671143 CDS YP_003205838.1 392374005 13099652 798331..799314 1 NC_013260.1 GHMP kinase 799314 13099652 DAMO_0938 Candidatus Methylomirabilis oxyfera GHMP kinase YP_003205838.1 798331 D 671143 CDS YP_003205839.1 392374006 13099653 799311..800027 1 NC_013260.1 nucleotidyltransferase 800027 13099653 DAMO_0939 Candidatus Methylomirabilis oxyfera nucleotidyltransferase YP_003205839.1 799311 D 671143 CDS YP_003205840.1 392374007 13099654 800042..800638 1 NC_013260.1 Sugar isomerase family protein 800638 13099654 DAMO_0940 Candidatus Methylomirabilis oxyfera Sugar isomerase family protein YP_003205840.1 800042 D 671143 CDS YP_003205841.1 392374008 13098907 800635..801198 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phosphatase 801198 13098907 DAMO_0941 Candidatus Methylomirabilis oxyfera phosphatase YP_003205841.1 800635 D 671143 CDS YP_003205842.1 392374009 13099655 801195..801911 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; transaldolase 801911 tal 13099655 tal Candidatus Methylomirabilis oxyfera transaldolase YP_003205842.1 801195 D 671143 CDS YP_003205843.1 392374010 13099656 802017..803057 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10065558; Product type e : enzyme; GDP-mannose 4,6-dehydratase 803057 gmd 13099656 gmd Candidatus Methylomirabilis oxyfera GDP-mannose 4,6-dehydratase YP_003205843.1 802017 D 671143 CDS YP_003205844.1 392374011 13099657 complement(803157..803717) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 803717 13099657 DAMO_0944 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205844.1 803157 R 671143 CDS YP_003205845.1 392374012 13099658 complement(803742..803924) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 803924 13099658 DAMO_0945 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205845.1 803742 R 671143 CDS YP_003205846.1 392374013 13099659 complement(804210..804533) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 804533 13099659 DAMO_0946 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205846.1 804210 R 671143 CDS YP_003205847.1 392374014 13099660 complement(804643..804966) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 804966 13099660 DAMO_0947 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205847.1 804643 R 671143 CDS YP_003205848.1 392374015 13099661 complement(805037..806215) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; transporter, major facilitator family. narK is a member of this family 806215 13099661 DAMO_0948 Candidatus Methylomirabilis oxyfera transporter, major facilitator family. narK is a member of this family YP_003205848.1 805037 R 671143 CDS YP_003205849.1 392374016 13099662 806332..807057 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 2-phosphosulfolactate phosphatase 807057 comB 13099662 comB Candidatus Methylomirabilis oxyfera 2-phosphosulfolactate phosphatase YP_003205849.1 806332 D 671143 CDS YP_003205850.1 392374017 13099663 complement(807020..807172) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 807172 13099663 DAMO_0950 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205850.1 807020 R 671143 CDS YP_003205851.1 392374018 13098832 807352..807813 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 807813 13098832 DAMO_0951 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205851.1 807352 D 671143 CDS YP_003205852.1 392374019 13098409 807874..808074 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 808074 13098409 DAMO_0952 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205852.1 807874 D 671143 CDS YP_003205853.1 392374020 13099664 complement(808098..808715) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 808715 13099664 DAMO_0953 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205853.1 808098 R 671143 CDS YP_003205854.1 392374021 13099665 complement(808708..809397) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 809397 13099665 DAMO_0954 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205854.1 808708 R 671143 CDS YP_003205855.1 392374022 13099666 complement(809791..810834) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 810834 13099666 DAMO_0955 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205855.1 809791 R 671143 CDS YP_003205856.1 392374023 13099667 complement(810933..811124) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 811124 13099667 DAMO_0956 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205856.1 810933 R 671143 CDS YP_003205857.1 392374024 13099668 complement(811157..811369) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 811369 13099668 DAMO_0957 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205857.1 811157 R 671143 CDS YP_003205858.1 392374025 13100056 811406..811570 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 811570 13100056 DAMO_0958 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205858.1 811406 D 671143 CDS YP_003205859.1 392374026 13099669 811849..812169 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 812169 13099669 DAMO_0959 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205859.1 811849 D 671143 CDS YP_003205860.1 392374027 13099670 812239..812409 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 812409 13099670 DAMO_0960 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205860.1 812239 D 671143 CDS YP_003205861.1 392374028 13099671 812475..813755 1 NC_013260.1 outer membrane efflux protein 813755 13099671 DAMO_0961 Candidatus Methylomirabilis oxyfera outer membrane efflux protein YP_003205861.1 812475 D 671143 CDS YP_003205862.1 392374029 13099672 813802..815079 1 NC_013260.1 hypothetical protein 815079 13099672 DAMO_0962 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205862.1 813802 D 671143 CDS YP_003205863.1 392374030 13099673 815223..818375 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cation efflux system protein silA 818375 silA 13099673 silA Candidatus Methylomirabilis oxyfera cation efflux system protein silA YP_003205863.1 815223 D 671143 CDS YP_003205864.1 392374031 13099674 complement(818524..818637) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 818637 13099674 DAMO_0964 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205864.1 818524 R 671143 CDS YP_003205865.1 392374032 13099675 complement(818634..818786) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 818786 13099675 DAMO_0965 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205865.1 818634 R 671143 CDS YP_003205866.1 392374033 13099676 complement(818786..819871) 1 NC_013260.1 peptidase M50 819871 13099676 DAMO_0966 Candidatus Methylomirabilis oxyfera peptidase M50 YP_003205866.1 818786 R 671143 CDS YP_003205867.1 392374034 13099677 820040..820165 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 820165 13099677 DAMO_0967 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205867.1 820040 D 671143 CDS YP_003205868.1 392374035 13099678 820302..820511 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 820511 13099678 DAMO_0968 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205868.1 820302 D 671143 CDS YP_003205869.1 392374036 13099679 821038..822894 1 NC_013260.1 glycogen phosphorylase 822894 glgP 13099679 glgP Candidatus Methylomirabilis oxyfera glycogen phosphorylase YP_003205869.1 821038 D 671143 CDS YP_003205870.1 392374037 13099680 823129..823587 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 823587 13099680 DAMO_0970 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205870.1 823129 D 671143 CDS YP_003205871.1 392374038 13099681 complement(823557..823826) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 823826 13099681 DAMO_0971 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205871.1 823557 R 671143 CDS YP_003205872.1 392374039 13098816 complement(823920..824207) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 824207 13098816 DAMO_0972 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205872.1 823920 R 671143 CDS YP_003205873.1 392374040 13099682 complement(824333..824575) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 824575 13099682 DAMO_0973 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205873.1 824333 R 671143 CDS YP_003205874.1 392374041 13099683 complement(824598..824897) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 824897 13099683 DAMO_0974 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205874.1 824598 R 671143 CDS YP_003205875.1 392374042 13099765 824936..826786 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 10572147, 12037319, 7674922; Product type e : enzyme; cell division protein FtsH 826786 ftsH 13099765 ftsH Candidatus Methylomirabilis oxyfera cell division protein FtsH YP_003205875.1 824936 D 671143 CDS YP_003205876.1 392374043 13099766 complement(827003..827089) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 827089 13099766 DAMO_0976 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205876.1 827003 R 671143 CDS YP_003205877.1 392374044 13099767 827174..827620 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 827620 13099767 DAMO_0977 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205877.1 827174 D 671143 CDS YP_003205878.1 392374045 13100248 827617..828726 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 828726 13100248 DAMO_0978 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205878.1 827617 D 671143 CDS YP_003205879.1 392374046 13099768 828737..829153 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 829153 13099768 DAMO_0979 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205879.1 828737 D 671143 CDS YP_003205880.1 392374047 13099769 829150..831126 1 NC_013260.1 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein 831126 13099769 DAMO_0980 Candidatus Methylomirabilis oxyfera Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_003205880.1 829150 D 671143 CDS YP_003205881.1 392374048 13099770 831239..832921 1 NC_013260.1 thiamine pyrophosphate enzyme domain protein TPP-binding 832921 13099770 DAMO_0981 Candidatus Methylomirabilis oxyfera thiamine pyrophosphate enzyme domain protein TPP-binding YP_003205881.1 831239 D 671143 CDS YP_003205882.1 392374049 13099771 833181..834296 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; pqq coenzyme synthesis protein (pqqE) 834296 13099771 DAMO_0982 Candidatus Methylomirabilis oxyfera pqq coenzyme synthesis protein (pqqE) YP_003205882.1 833181 D 671143 CDS YP_003205883.1 392374050 13099772 834512..834979 1 NC_013260.1 UspA protein 834979 13099772 DAMO_0983 Candidatus Methylomirabilis oxyfera UspA protein YP_003205883.1 834512 D 671143 CDS YP_003205884.1 392374051 13100224 834976..836094 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 836094 13100224 DAMO_0984 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205884.1 834976 D 671143 CDS YP_003205885.1 392374052 13099773 836105..836704 1 NC_013260.1 adenylylsulfate kinase 836704 13099773 DAMO_0985 Candidatus Methylomirabilis oxyfera adenylylsulfate kinase YP_003205885.1 836105 D 671143 CDS YP_003205886.1 392374053 13099774 836701..836973 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 836973 13099774 DAMO_0986 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205886.1 836701 D 671143 CDS YP_003205887.1 392374054 13099775 837232..837675 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type f : factor; HspC2 heat shock protein 837675 13099775 DAMO_0987 Candidatus Methylomirabilis oxyfera HspC2 heat shock protein YP_003205887.1 837232 D 671143 CDS YP_003205888.1 392374055 13099776 837761..838279 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 838279 13099776 DAMO_0988 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205888.1 837761 D 671143 CDS YP_003205889.1 392374056 13099777 838297..839499 1 NC_013260.1 methionine adenosyltransferase 839499 13099777 DAMO_0989 Candidatus Methylomirabilis oxyfera methionine adenosyltransferase YP_003205889.1 838297 D 671143 CDS YP_003205890.1 392374057 13099778 839521..840165 1 NC_013260.1 hypothetical protein 840165 13099778 DAMO_0990 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205890.1 839521 D 671143 CDS YP_003205891.1 392374058 13099779 840267..841079 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 841079 13099779 DAMO_0991 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205891.1 840267 D 671143 CDS YP_003205892.1 392374059 13099780 841107..843860 1 NC_013260.1 Calcium-transporting ATPase 843860 13099780 DAMO_0992 Candidatus Methylomirabilis oxyfera Calcium-transporting ATPase YP_003205892.1 841107 D 671143 CDS YP_003205893.1 392374060 13099781 843857..844183 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 844183 13099781 DAMO_0993 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205893.1 843857 D 671143 CDS YP_003205894.1 392374061 13099782 844421..844984 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; GCN5-related N-acetyltransferase 844984 13099782 DAMO_0994 Candidatus Methylomirabilis oxyfera GCN5-related N-acetyltransferase YP_003205894.1 844421 D 671143 CDS YP_003205895.1 392374062 13099783 845177..845323 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 845323 13099783 DAMO_0995 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205895.1 845177 D 671143 CDS YP_003205896.1 392374063 13099784 845358..847829 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; ATP-dependent protease 847829 13099784 DAMO_0996 Candidatus Methylomirabilis oxyfera ATP-dependent protease YP_003205896.1 845358 D 671143 CDS YP_003205898.1 392374065 13099786 847929..848453 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 848453 13099786 DAMO_0998 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205898.1 847929 D 671143 CDS YP_003205899.1 392374066 13099787 848587..849072 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 849072 13099787 DAMO_0999 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205899.1 848587 D 671143 CDS YP_003205900.1 392374067 13099788 complement(849140..849628) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 849628 13099788 DAMO_1000 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205900.1 849140 R 671143 CDS YP_003205901.1 392374068 13099789 849711..850031 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 850031 13099789 DAMO_1001 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205901.1 849711 D 671143 CDS YP_003205902.1 392374069 13099790 850028..850879 1 NC_013260.1 transposase 850879 13099790 DAMO_1002 Candidatus Methylomirabilis oxyfera transposase YP_003205902.1 850028 D 671143 CDS YP_003205903.1 392374070 13099791 complement(851141..851620) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 851620 13099791 DAMO_1003 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205903.1 851141 R 671143 CDS YP_003205904.1 392374071 13099792 complement(851617..851733) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 851733 13099792 DAMO_1004 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205904.1 851617 R 671143 CDS YP_003205905.1 392374072 13099793 complement(851795..852907) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Sel1 domain protein repeat-containing protein 852907 13099793 DAMO_1005 Candidatus Methylomirabilis oxyfera Sel1 domain protein repeat-containing protein YP_003205905.1 851795 R 671143 CDS YP_003205906.1 392374073 13099794 853128..853631 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 853631 13099794 DAMO_1006 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205906.1 853128 D 671143 CDS YP_003205907.1 392374074 13099795 853631..854635 1 NC_013260.1 integrase, catalytic region 854635 13099795 DAMO_1007 Candidatus Methylomirabilis oxyfera integrase, catalytic region YP_003205907.1 853631 D 671143 CDS YP_003205908.1 392374075 13099796 complement(854759..854998) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 854998 13099796 DAMO_1008 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205908.1 854759 R 671143 CDS YP_003205909.1 392374076 13099797 complement(855201..855467) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 855467 13099797 DAMO_1009 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205909.1 855201 R 671143 CDS YP_003205910.1 392374077 13099798 855625..855792 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 855792 13099798 DAMO_1010 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205910.1 855625 D 671143 CDS YP_003205911.1 392374078 13099799 complement(855942..858224) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 2140770; Product type e : enzyme; Vesicle-fusing ATPase 858224 13099799 DAMO_1011 Candidatus Methylomirabilis oxyfera Vesicle-fusing ATPase YP_003205911.1 855942 R 671143 CDS YP_003205912.1 392374079 13099800 complement(858188..858388) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 858388 13099800 DAMO_1012 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205912.1 858188 R 671143 CDS YP_003205913.1 392374080 13099801 complement(858566..858757) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 858757 13099801 DAMO_1013 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205913.1 858566 R 671143 CDS YP_003205914.1 392374081 13099802 858852..859325 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 859325 13099802 DAMO_1014 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205914.1 858852 D 671143 CDS YP_003205915.1 392374082 13099803 complement(859303..859542) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 859542 13099803 DAMO_1015 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205915.1 859303 R 671143 CDS YP_003205916.1 392374083 13099804 859648..860535 1 NC_013260.1 Rhodanese-related sulfurtransferase-like protein 860535 13099804 DAMO_1016 Candidatus Methylomirabilis oxyfera Rhodanese-related sulfurtransferase-like protein YP_003205916.1 859648 D 671143 CDS YP_003205917.1 392374084 13099805 860638..861636 1 NC_013260.1 galactose-1-phosphate uridylyltransferase 861636 13099805 DAMO_1017 Candidatus Methylomirabilis oxyfera galactose-1-phosphate uridylyltransferase YP_003205917.1 860638 D 671143 CDS YP_003205918.1 392374085 13099806 861646..862251 1 NC_013260.1 Pyrazinamidase/nicotinamidase (PZAase) (Nicotine deamidase) (NAMase) 862251 pncA 13099806 pncA Candidatus Methylomirabilis oxyfera Pyrazinamidase/nicotinamidase (PZAase) (Nicotine deamidase) (NAMase) YP_003205918.1 861646 D 671143 CDS YP_003205919.1 392374086 13099807 862248..863585 1 NC_013260.1 nicotinate phosphoribosyltransferase 863585 13099807 DAMO_1019 Candidatus Methylomirabilis oxyfera nicotinate phosphoribosyltransferase YP_003205919.1 862248 D 671143 CDS YP_003205920.1 392374087 13099809 863675..863857 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 863857 13099809 DAMO_1020 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205920.1 863675 D 671143 CDS YP_003205921.1 392374088 13099810 863854..864429 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 864429 13099810 DAMO_1021 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205921.1 863854 D 671143 CDS YP_003205922.1 392374089 13099811 864846..865256 1 NC_013260.1 BadM/Rrf2 family transcriptional regulator 865256 13099811 DAMO_1022 Candidatus Methylomirabilis oxyfera BadM/Rrf2 family transcriptional regulator YP_003205922.1 864846 D 671143 CDS YP_003205923.1 392374090 13099812 865290..866204 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 7610184, 8082776; Product type e : enzyme; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) 866204 cysK 13099812 cysK Candidatus Methylomirabilis oxyfera pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) YP_003205923.1 865290 D 671143 CDS YP_003205924.1 392374091 13099813 866225..867373 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Molybdopterin biosynthesis protein moeB 867373 13099813 DAMO_1024 Candidatus Methylomirabilis oxyfera Molybdopterin biosynthesis protein moeB YP_003205924.1 866225 D 671143 CDS YP_003205925.1 392374092 13099814 867467..868408 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; permease 868408 13099814 DAMO_1025 Candidatus Methylomirabilis oxyfera permease YP_003205925.1 867467 D 671143 CDS YP_003205926.1 392374093 13098665 868438..868680 1 NC_013260.1 SirA family protein 868680 13098665 DAMO_1026 Candidatus Methylomirabilis oxyfera SirA family protein YP_003205926.1 868438 D 671143 CDS YP_003205927.1 392374094 13099815 868702..868950 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 868950 13099815 DAMO_1027 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205927.1 868702 D 671143 CDS YP_003205928.1 392374095 13099759 869030..869965 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 7610184, 8082776; Product type e : enzyme; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) 869965 cysK 13099759 cysK Candidatus Methylomirabilis oxyfera pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) YP_003205928.1 869030 D 671143 CDS YP_003205929.1 392374096 13099816 869967..870455 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Mov34/MPN/PAD-1 family protein 870455 13099816 DAMO_1029 Candidatus Methylomirabilis oxyfera Mov34/MPN/PAD-1 family protein YP_003205929.1 869967 D 671143 CDS YP_003205930.1 392374097 13099817 870539..871480 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 871480 13099817 DAMO_1030 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205930.1 870539 D 671143 CDS YP_003205931.1 392374098 13099818 871529..873358 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme; Sulfite/ferredoxin reductase (cysI) 873358 13099818 DAMO_1031 Candidatus Methylomirabilis oxyfera Sulfite/ferredoxin reductase (cysI) YP_003205931.1 871529 D 671143 CDS YP_003205932.1 392374099 13100070 873422..874402 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 874402 13100070 DAMO_1032 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205932.1 873422 D 671143 CDS YP_003205933.1 392374100 13099819 874335..874625 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 874625 13099819 DAMO_1033 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205933.1 874335 D 671143 CDS YP_003205934.1 392374101 13099820 874664..875449 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; phosphoadenosine phosphosulfate reductase(PAPS reductase, thioredoxin dependent) (PAdoPS reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) 875449 cysH 13099820 cysH Candidatus Methylomirabilis oxyfera phosphoadenosine phosphosulfate reductase(PAPS reductase, thioredoxin dependent) (PAdoPS reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) YP_003205934.1 874664 D 671143 CDS YP_003205935.1 392374102 13099821 875483..876676 1 NC_013260.1 Sulfate adenylyltransferase (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase) 876676 sat 13099821 sat Candidatus Methylomirabilis oxyfera Sulfate adenylyltransferase (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase) YP_003205935.1 875483 D 671143 CDS YP_003205936.1 392374103 13099822 complement(876677..877330) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 877330 13099822 DAMO_1036 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205936.1 876677 R 671143 CDS YP_003205937.1 392374104 13100071 877461..877700 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 877700 13100071 DAMO_1037 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205937.1 877461 D 671143 CDS YP_003205938.1 392374105 13099824 877959..878195 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 878195 13099824 DAMO_1038 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205938.1 877959 D 671143 CDS YP_003205939.1 392374106 13099825 878197..879450 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; threonine synthase (TS) 879450 thrC 13099825 thrC Candidatus Methylomirabilis oxyfera threonine synthase (TS) YP_003205939.1 878197 D 671143 CDS YP_003205940.1 392374107 13099826 879532..879810 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 879810 13099826 DAMO_1040 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205940.1 879532 D 671143 CDS YP_003205941.1 392374108 13099827 complement(879842..880390) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 880390 13099827 DAMO_1041 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205941.1 879842 R 671143 CDS YP_003205942.1 392374109 13100069 complement(880421..880837) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 880837 13100069 DAMO_1042 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205942.1 880421 R 671143 CDS YP_003205943.1 392374110 13098799 complement(880880..881002) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 881002 13098799 DAMO_1043 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205943.1 880880 R 671143 CDS YP_003205944.1 392374111 13099828 complement(881034..882026) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15469281; Product type e : enzyme; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 882026 ispH 13099828 ispH Candidatus Methylomirabilis oxyfera 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_003205944.1 881034 R 671143 CDS YP_003205945.1 392374112 13099829 complement(882055..882210) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 882210 13099829 DAMO_1045 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205945.1 882055 R 671143 CDS YP_003205946.1 392374113 13099754 complement(882222..882635) 1 NC_013260.1 acT domain-containing protein 882635 13099754 DAMO_1046 Candidatus Methylomirabilis oxyfera acT domain-containing protein YP_003205946.1 882222 R 671143 CDS YP_003205947.1 392374114 13099830 882843..883628 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; lactam utilization protein 883628 13099830 DAMO_1047 Candidatus Methylomirabilis oxyfera lactam utilization protein YP_003205947.1 882843 D 671143 CDS YP_003205948.1 392374115 13098847 883609..884295 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; carboxylase 884295 13098847 DAMO_1048 Candidatus Methylomirabilis oxyfera carboxylase YP_003205948.1 883609 D 671143 CDS YP_003205949.1 392374116 13099831 884282..885370 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; urea amidolyase-related protein 885370 13099831 DAMO_1049 Candidatus Methylomirabilis oxyfera urea amidolyase-related protein YP_003205949.1 884282 D 671143 CDS YP_003205950.1 392374117 13099832 complement(885260..885802) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 885802 13099832 DAMO_1050 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205950.1 885260 R 671143 CDS YP_003205951.1 392374118 13099833 885405..885812 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 885812 13099833 DAMO_1051 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205951.1 885405 D 671143 CDS YP_003205952.1 392374119 13099834 885953..886951 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; galactose-1-phosphate uridyl transferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) 886951 13099834 DAMO_1052 Candidatus Methylomirabilis oxyfera galactose-1-phosphate uridyl transferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) YP_003205952.1 885953 D 671143 CDS YP_003205953.1 392374120 13098478 887221..887559 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator; glutamine synthetase regulatory protein P-II 887559 glnB 13098478 glnB Candidatus Methylomirabilis oxyfera glutamine synthetase regulatory protein P-II YP_003205953.1 887221 D 671143 CDS YP_003205954.1 392374121 13099835 887645..887908 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; hypothetical protein 887908 glnA 13099835 glnA Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205954.1 887645 D 671143 CDS YP_003205955.1 392374122 13099836 887920..889059 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; glutamine synthetase, type I, N-terminal (Glutamate--ammonia ligase I) (GSI) 889059 glnA 13099836 glnA Candidatus Methylomirabilis oxyfera glutamine synthetase, type I, N-terminal (Glutamate--ammonia ligase I) (GSI) YP_003205955.1 887920 D 671143 CDS YP_003205956.1 392374123 13099837 889264..889689 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 889689 13099837 DAMO_1056 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205956.1 889264 D 671143 CDS YP_003205957.1 392374124 13099838 889816..892962 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) 892962 13099838 DAMO_1057 Candidatus Methylomirabilis oxyfera Glutamate-ammonia-ligase adenylyltransferase ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) YP_003205957.1 889816 D 671143 CDS YP_003205958.1 392374125 13099839 892676..893086 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 893086 13099839 DAMO_1058 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205958.1 892676 D 671143 CDS YP_003205959.1 392374126 13099840 893096..894001 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 894001 13099840 DAMO_1059 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205959.1 893096 D 671143 CDS YP_003205960.1 392374127 13099841 894182..894568 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 894568 13099841 DAMO_1060 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205960.1 894182 D 671143 CDS YP_003205961.1 392374128 13098399 895378..895485 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 895485 13098399 DAMO_1062 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205961.1 895378 D 671143 CDS YP_003205962.1 392374129 13098397 complement(895739..895960) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 895960 13098397 DAMO_1063 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205962.1 895739 R 671143 CDS YP_003205963.1 392374130 13099843 complement(896228..896608) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 896608 13099843 DAMO_1064 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205963.1 896228 R 671143 CDS YP_003205964.1 392374131 13099844 complement(896630..898420) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Long-chain-fatty-acid--CoA ligase 898420 13099844 DAMO_1065 Candidatus Methylomirabilis oxyfera Long-chain-fatty-acid--CoA ligase YP_003205964.1 896630 R 671143 CDS YP_003205965.1 392374132 13099845 complement(898539..899630) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 899630 13099845 DAMO_1066 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205965.1 898539 R 671143 CDS YP_003205966.1 392374133 13099927 complement(899634..900737) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 900737 13099927 DAMO_1067 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205966.1 899634 R 671143 CDS YP_003205967.1 392374134 13099928 complement(900861..902162) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 902162 13099928 DAMO_1068 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205967.1 900861 R 671143 CDS YP_003205968.1 392374135 13098740 complement(902512..902826) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 902826 13098740 DAMO_1069 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205968.1 902512 R 671143 CDS YP_003205969.1 392374136 13099929 902539..902985 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 902985 13099929 DAMO_1070 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205969.1 902539 D 671143 CDS YP_003205970.1 392374137 13099930 903079..903777 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 903777 13099930 DAMO_1071 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205970.1 903079 D 671143 CDS YP_003205971.1 392374138 13099875 903843..904304 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 904304 13099875 DAMO_1072 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205971.1 903843 D 671143 CDS YP_003205972.1 392374139 13099931 904360..906957 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12054807, 12220194; Product type f : factor; chaperone 906957 clpB 13099931 clpB Candidatus Methylomirabilis oxyfera chaperone YP_003205972.1 904360 D 671143 CDS YP_003205973.1 392374140 13099934 907927..908685 1 NC_013260.1 peptidase M48, Ste24p 908685 13099934 DAMO_1076 Candidatus Methylomirabilis oxyfera peptidase M48, Ste24p YP_003205973.1 907927 D 671143 CDS YP_003205974.1 392374141 13099935 908837..910105 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; Serine hydroxymethyltransferase (glyA) 910105 glyA 13099935 glyA Candidatus Methylomirabilis oxyfera Serine hydroxymethyltransferase (glyA) YP_003205974.1 908837 D 671143 CDS YP_003205975.1 392374142 13099936 910127..910600 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 910600 13099936 DAMO_1078 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205975.1 910127 D 671143 CDS YP_003205976.1 392374143 13099937 910603..911871 1 NC_013260.1 glutamyl-tRNA reductase (GluTR) 911871 hemA 13099937 hemA Candidatus Methylomirabilis oxyfera glutamyl-tRNA reductase (GluTR) YP_003205976.1 910603 D 671143 CDS YP_003205977.1 392374144 13099938 911907..912854 1 NC_013260.1 porphobilinogen deaminase 912854 hemC 13099938 hemC Candidatus Methylomirabilis oxyfera porphobilinogen deaminase YP_003205977.1 911907 D 671143 CDS YP_003205978.1 392374145 13099939 912854..914383 1 NC_013260.1 Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase 914383 13099939 DAMO_1081 Candidatus Methylomirabilis oxyfera Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase YP_003205978.1 912854 D 671143 CDS YP_003205979.1 392374146 13100046 914545..914853 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 914853 13100046 DAMO_1082 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205979.1 914545 D 671143 CDS YP_003205980.1 392374147 13099940 914850..915440 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10841541; Product type pf : putative factor; septum formation protein 915440 yhdE 13099940 yhdE Candidatus Methylomirabilis oxyfera septum formation protein YP_003205980.1 914850 D 671143 CDS YP_003205981.1 392374148 13099941 915458..915619 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 915619 13099941 DAMO_1084 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205981.1 915458 D 671143 CDS YP_003205982.1 392374149 13099942 915585..915848 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 915848 13099942 DAMO_1085 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205982.1 915585 D 671143 CDS YP_003205983.1 392374150 13098405 complement(915897..916082) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 916082 13098405 DAMO_1086 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205983.1 915897 R 671143 CDS YP_003205984.1 392374151 13099943 complement(916376..916555) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 916555 13099943 DAMO_1087 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205984.1 916376 R 671143 CDS YP_003205985.1 392374152 13098425 916569..916805 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 916805 13098425 DAMO_1089 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205985.1 916569 D 671143 CDS YP_003205986.1 392374153 13098427 complement(916587..917072) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 917072 13098427 DAMO_1088 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205986.1 916587 R 671143 CDS YP_003205987.1 392374154 13099944 917170..917262 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 917262 13099944 DAMO_1090 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205987.1 917170 D 671143 CDS YP_003205988.1 392374155 13099945 917308..917901 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; aromatic acid decarboxylase 917901 yclB 13099945 yclB Candidatus Methylomirabilis oxyfera aromatic acid decarboxylase YP_003205988.1 917308 D 671143 CDS YP_003205989.1 392374156 13098904 917831..918007 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 918007 13098904 DAMO_1092 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205989.1 917831 D 671143 CDS YP_003205990.1 392374157 13099946 918093..918770 1 NC_013260.1 motA/TolQ/ExbB proton channel 918770 13099946 DAMO_1093 Candidatus Methylomirabilis oxyfera motA/TolQ/ExbB proton channel YP_003205990.1 918093 D 671143 CDS YP_003205991.1 392374158 13099947 918812..919192 1 NC_013260.1 TolR protein 919192 13099947 DAMO_1094 Candidatus Methylomirabilis oxyfera TolR protein YP_003205991.1 918812 D 671143 CDS YP_003205992.1 392374159 13099948 919221..919838 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 919838 13099948 DAMO_1095 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205992.1 919221 D 671143 CDS YP_003205993.1 392374160 13099949 919883..920002 1 NC_013260.1 hypothetical protein 920002 13099949 DAMO_1096 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205993.1 919883 D 671143 CDS YP_003205994.1 392374161 13099951 920055..920342 1 NC_013260.1 Sec-independent protein translocase protein TatA/E 920342 13099951 DAMO_1097 Candidatus Methylomirabilis oxyfera Sec-independent protein translocase protein TatA/E YP_003205994.1 920055 D 671143 CDS YP_003205995.1 392374162 13099950 920335..921135 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11526245; Product type t : transporter; Sec-independent protein translocase protein TatC 921135 13099950 DAMO_1098 Candidatus Methylomirabilis oxyfera Sec-independent protein translocase protein TatC YP_003205995.1 920335 D 671143 CDS YP_003205996.1 392374163 13099952 complement(921173..922528) 1 NC_013260.1 transcriptional repressor for high-affinity phosphate uptake 922528 13099952 DAMO_1099 Candidatus Methylomirabilis oxyfera transcriptional repressor for high-affinity phosphate uptake YP_003205996.1 921173 R 671143 CDS YP_003205997.1 392374164 13098896 complement(922537..923283) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter; high-affinity phosphate transport protein (ABC superfamily, atp_bind) 923283 pstB 13098896 pstB Candidatus Methylomirabilis oxyfera high-affinity phosphate transport protein (ABC superfamily, atp_bind) YP_003205997.1 922537 R 671143 CDS YP_003205998.1 392374165 13099953 complement(923468..925087) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 925087 13099953 DAMO_1101 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205998.1 923468 R 671143 CDS YP_003205999.1 392374166 13099954 complement(925084..927354) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 927354 13099954 DAMO_1102 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003205999.1 925084 R 671143 CDS YP_003206000.1 392374167 13099955 complement(927374..928384) 1 NC_013260.1 phosphate ABC transporter substrate-binding protein 928384 PstS 13099955 PstS Candidatus Methylomirabilis oxyfera phosphate ABC transporter substrate-binding protein YP_003206000.1 927374 R 671143 CDS YP_003206001.1 392374168 13099956 complement(928600..929997) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Phosphate-selective porin O and P 929997 13099956 DAMO_1104 Candidatus Methylomirabilis oxyfera Phosphate-selective porin O and P YP_003206001.1 928600 R 671143 CDS YP_003206002.1 392374169 13099957 complement(930165..930524) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 930524 13099957 DAMO_1105 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206002.1 930165 R 671143 CDS YP_003206003.1 392374170 13099958 complement(930547..930765) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 930765 13099958 DAMO_1106 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206003.1 930547 R 671143 CDS YP_003206004.1 392374171 13099959 931380..931751 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 931751 13099959 DAMO_1107 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206004.1 931380 D 671143 CDS YP_003206005.1 392374172 13099960 complement(931801..933000) 1 NC_013260.1 S-adenosylmethionine synthetase (Methionine adenosyltransferase) (AdoMet synthetase) (MAT) 933000 metK 13099960 metK Candidatus Methylomirabilis oxyfera S-adenosylmethionine synthetase (Methionine adenosyltransferase) (AdoMet synthetase) (MAT) YP_003206005.1 931801 R 671143 CDS YP_003206006.1 392374173 13098682 complement(933056..936172) 1 NC_013260.1 Cation-transporting ATPase 936172 13098682 DAMO_1109 Candidatus Methylomirabilis oxyfera Cation-transporting ATPase YP_003206006.1 933056 R 671143 CDS YP_003206007.1 392374174 13099961 complement(936252..936953) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 936953 13099961 DAMO_1110 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206007.1 936252 R 671143 CDS YP_003206008.1 392374175 13099962 complement(936975..937481) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 937481 13099962 DAMO_1111 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206008.1 936975 R 671143 CDS YP_003206009.1 392374176 13098683 complement(937495..937785) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 937785 13098683 DAMO_1112 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206009.1 937495 R 671143 CDS YP_003206010.1 392374177 13099963 complement(937881..939419) 1 NC_013260.1 hypothetical protein 939419 13099963 DAMO_1113 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206010.1 937881 R 671143 CDS YP_003206011.1 392374178 13099964 complement(939257..939532) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 939532 13099964 DAMO_1114 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206011.1 939257 R 671143 CDS YP_003206012.1 392374179 13099965 939694..941526 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 941526 13099965 DAMO_1115 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206012.1 939694 D 671143 CDS YP_003206013.1 392374180 13099966 complement(941643..942599) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Nucleotidyl transferase 942599 13099966 DAMO_1116 Candidatus Methylomirabilis oxyfera Nucleotidyl transferase YP_003206013.1 941643 R 671143 CDS YP_003206014.1 392374181 13098539 942270..942467 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 942467 13098539 DAMO_1117 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206014.1 942270 D 671143 CDS YP_003206015.1 392374182 13099967 complement(942775..944364) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; cytochrome c oxidase, subunit I 944364 13099967 DAMO_1118 Candidatus Methylomirabilis oxyfera cytochrome c oxidase, subunit I YP_003206015.1 942775 R 671143 CDS YP_003206016.1 392374183 13099968 complement(944375..944932) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; cytochrome c oxidase, subunit II 944932 13099968 DAMO_1119 Candidatus Methylomirabilis oxyfera cytochrome c oxidase, subunit II YP_003206016.1 944375 R 671143 CDS YP_003206017.1 392374184 13099969 945326..945658 1 NC_013260.1 hypothetical protein 945658 13099969 DAMO_1120 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206017.1 945326 D 671143 CDS YP_003206018.1 392374185 13099970 945648..946061 1 NC_013260.1 HEPN domain-containing protein 946061 13099970 DAMO_1121 Candidatus Methylomirabilis oxyfera HEPN domain-containing protein YP_003206018.1 945648 D 671143 CDS YP_003206019.1 392374186 13099971 complement(946063..946233) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 946233 13099971 DAMO_1122 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206019.1 946063 R 671143 CDS YP_003206020.1 392374187 13099972 complement(946486..946971) 1 NC_013260.1 protein arsC (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase) 946971 arsC 13099972 arsC Candidatus Methylomirabilis oxyfera protein arsC (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase) YP_003206020.1 946486 R 671143 CDS YP_003206021.1 392374188 13099973 complement(947037..948146) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 948146 13099973 DAMO_1124 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206021.1 947037 R 671143 CDS YP_003206022.1 392374189 13099974 complement(948202..948528) 1 NC_013260.1 Arsenical resistance operon repressor 948528 arsR 13099974 arsR Candidatus Methylomirabilis oxyfera Arsenical resistance operon repressor YP_003206022.1 948202 R 671143 CDS YP_003206023.1 392374190 13099975 948758..951082 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 9008164; Product type pf : putative factor; transcriptional accessory protein containing S1 RNA-binding domain 951082 13099975 DAMO_1126 Candidatus Methylomirabilis oxyfera transcriptional accessory protein containing S1 RNA-binding domain YP_003206023.1 948758 D 671143 CDS YP_003206024.1 392374191 13099976 951079..952167 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 952167 13099976 DAMO_1127 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206024.1 951079 D 671143 CDS YP_003206025.1 392374192 13099977 complement(952174..954006) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Sensor protein yycG 954006 13099977 DAMO_1128 Candidatus Methylomirabilis oxyfera Sensor protein yycG YP_003206025.1 952174 R 671143 CDS YP_003206026.1 392374193 13099978 complement(954024..954707) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator; response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) 954707 phoB 13099978 phoB Candidatus Methylomirabilis oxyfera response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) YP_003206026.1 954024 R 671143 CDS YP_003206027.1 392374194 13099979 954898..955236 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; ModE family transcriptional regulator 955236 13099979 DAMO_1130 Candidatus Methylomirabilis oxyfera ModE family transcriptional regulator YP_003206027.1 954898 D 671143 CDS YP_003206028.1 392374195 13099980 955373..955579 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 2820842; Product type f : factor; molybdenum-pterin binding protein (Mop); putative molybdenum transport component 955579 mop 13099980 mop Candidatus Methylomirabilis oxyfera molybdenum-pterin binding protein (Mop); putative molybdenum transport component YP_003206028.1 955373 D 671143 CDS YP_003206029.1 392374196 13099921 955589..956467 1 NC_013260.1 ABC-type tungstate transport system permease component-like protein 956467 13099921 DAMO_1132 Candidatus Methylomirabilis oxyfera ABC-type tungstate transport system permease component-like protein YP_003206029.1 955589 D 671143 CDS YP_003206030.1 392374197 13099981 956688..958175 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 958175 13099981 DAMO_1133 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206030.1 956688 D 671143 CDS YP_003206031.1 392374198 13099922 958226..958564 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; formylmethanofuran dehydrogenase, subunit D (FwdD-2) 958564 13099922 DAMO_1134 Candidatus Methylomirabilis oxyfera formylmethanofuran dehydrogenase, subunit D (FwdD-2) YP_003206031.1 958226 D 671143 CDS YP_003206032.1 392374199 13099984 960003..961421 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; NADH dehydrogenase 961421 13099984 DAMO_1137 Candidatus Methylomirabilis oxyfera NADH dehydrogenase YP_003206032.1 960003 D 671143 CDS YP_003206033.1 392374200 13098653 961409..964081 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; formate dehydrogenase, alpha subunit (fdhA1) 964081 fdhA 13098653 fdhA Candidatus Methylomirabilis oxyfera formate dehydrogenase, alpha subunit (fdhA1) YP_003206033.1 961409 D 671143 CDS YP_003206034.1 392374201 13099985 964246..964515 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 964515 13099985 DAMO_1139 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206034.1 964246 D 671143 CDS YP_003206035.1 392374202 13098550 964559..964798 1 NC_013260.1 hypothetical protein 964798 13098550 DAMO_1140 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206035.1 964559 D 671143 CDS YP_003206036.1 392374203 13099986 965002..965868 1 NC_013260.1 molybdenum ABC transporter, periplasmic molybdate-binding protein 965868 13099986 DAMO_1141 Candidatus Methylomirabilis oxyfera molybdenum ABC transporter, periplasmic molybdate-binding protein YP_003206036.1 965002 D 671143 CDS YP_003206037.1 392374204 13099987 965881..966543 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter; molybdenum ABC transporter permease 966543 modB 13099987 modB Candidatus Methylomirabilis oxyfera molybdenum ABC transporter permease YP_003206037.1 965881 D 671143 CDS YP_003206038.1 392374205 13099988 966543..967637 1 NC_013260.1 molybdenum ABC transporter ATP-binding protein 967637 13099988 DAMO_1143 Candidatus Methylomirabilis oxyfera molybdenum ABC transporter ATP-binding protein YP_003206038.1 966543 D 671143 CDS YP_003206039.1 392374206 13100197 967669..968367 1 NC_013260.1 ABC-type tungstate transport permease protein 968367 13100197 DAMO_1144 Candidatus Methylomirabilis oxyfera ABC-type tungstate transport permease protein YP_003206039.1 967669 D 671143 CDS YP_003206040.1 392374207 13100198 968364..969455 1 NC_013260.1 Tungsten transporter ATP binding protein 969455 13100198 DAMO_1145 Candidatus Methylomirabilis oxyfera Tungsten transporter ATP binding protein YP_003206040.1 968364 D 671143 CDS YP_003206041.1 392374208 13099989 969665..969913 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 969913 13099989 DAMO_1146 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206041.1 969665 D 671143 CDS YP_003206042.1 392374209 13100191 969910..970407 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10339814, 11545279, 9061023, 9698384; Product type pe : putative enzyme; molybdenum cofactor biosynthesis protein C 970407 moaC 13100191 moaC Candidatus Methylomirabilis oxyfera molybdenum cofactor biosynthesis protein C YP_003206042.1 969910 D 671143 CDS YP_003206043.1 392374210 13099990 970457..971596 1 NC_013260.1 histone deacetylase/AcuC/AphA family protein 971596 13099990 DAMO_1148 Candidatus Methylomirabilis oxyfera histone deacetylase/AcuC/AphA family protein YP_003206043.1 970457 D 671143 CDS YP_003206044.1 392374211 13099991 971729..972016 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 972016 13099991 DAMO_1149 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206044.1 971729 D 671143 CDS YP_003206045.1 392374212 13099992 complement(971918..972142) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 972142 13099992 DAMO_1150 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206045.1 971918 R 671143 CDS YP_003206046.1 392374213 13098549 complement(972257..972643) 1 NC_013260.1 hypothetical protein 972643 13098549 DAMO_1151 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206046.1 972257 R 671143 CDS YP_003206047.1 392374214 13099993 972948..973268 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 973268 13099993 DAMO_1152 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206047.1 972948 D 671143 CDS YP_003206048.1 392374215 13099994 973265..974116 1 NC_013260.1 transposase 974116 13099994 DAMO_1153 Candidatus Methylomirabilis oxyfera transposase YP_003206048.1 973265 D 671143 CDS YP_003206049.1 392374216 13099995 complement(974095..974412) 1 NC_013260.1 hypothetical protein 974412 13099995 DAMO_1154 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206049.1 974095 R 671143 CDS YP_003206050.1 392374217 13099996 974727..976157 1 NC_013260.1 L-seryl-tRNA(Sec) selenium transferase (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase) 976157 selA 13099996 selA Candidatus Methylomirabilis oxyfera L-seryl-tRNA(Sec) selenium transferase (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase) YP_003206050.1 974727 D 671143 CDS YP_003206051.1 392374218 13098545 976154..976885 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; thymidylate kinase 976885 tmk 13098545 tmk Candidatus Methylomirabilis oxyfera thymidylate kinase YP_003206051.1 976154 D 671143 CDS YP_003206052.1 392374219 13099997 976872..977936 1 NC_013260.1 DNA polymerase III subunit delta' 977936 13099997 DAMO_1157 Candidatus Methylomirabilis oxyfera DNA polymerase III subunit delta' YP_003206052.1 976872 D 671143 CDS YP_003206053.1 392374220 13099998 977933..978832 1 NC_013260.1 Stage 0 sporulation protein yaaT 978832 13099998 DAMO_1158 Candidatus Methylomirabilis oxyfera Stage 0 sporulation protein yaaT YP_003206053.1 977933 D 671143 CDS YP_003206054.1 392374221 13099999 978829..980769 1 NC_013260.1 methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) 980769 metG 13099999 metG Candidatus Methylomirabilis oxyfera methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) YP_003206054.1 978829 D 671143 CDS YP_003206055.1 392374222 13100000 980769..981563 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; deoxyribonuclease (ycfH) 981563 13100000 DAMO_1160 Candidatus Methylomirabilis oxyfera deoxyribonuclease (ycfH) YP_003206055.1 980769 D 671143 CDS YP_003206056.1 392374223 13100001 complement(981727..982842) 1 NC_013260.1 glycine oxidase 982842 13100001 DAMO_1161 Candidatus Methylomirabilis oxyfera glycine oxidase YP_003206056.1 981727 R 671143 CDS YP_003206057.1 392374224 13100002 complement(982911..983189) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 983189 13100002 DAMO_1162 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206057.1 982911 R 671143 CDS YP_003206058.1 392374225 13100003 983163..983363 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 983363 13100003 DAMO_1163 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206058.1 983163 D 671143 CDS YP_003206059.1 392374226 13098809 complement(983386..983952) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Cytochrome c oxidase, subunit III 983952 13098809 DAMO_1164 Candidatus Methylomirabilis oxyfera Cytochrome c oxidase, subunit III YP_003206059.1 983386 R 671143 CDS YP_003206060.1 392374227 13098851 complement(983970..985694) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; cytochrome c oxidase, subunit I 985694 13098851 DAMO_1165 Candidatus Methylomirabilis oxyfera cytochrome c oxidase, subunit I YP_003206060.1 983970 R 671143 CDS YP_003206061.1 392374228 13100004 complement(985691..986395) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; cytochrome c oxidase, subunit II 986395 13100004 DAMO_1166 Candidatus Methylomirabilis oxyfera cytochrome c oxidase, subunit II YP_003206061.1 985691 R 671143 CDS YP_003206062.1 392374229 13100005 complement(986642..989641) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 989641 13100005 DAMO_1167 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206062.1 986642 R 671143 CDS YP_003206063.1 392374230 13098536 complement(989638..990444) 1 NC_013260.1 mechanosensitive ion channel protein MscS 990444 13098536 DAMO_1168 Candidatus Methylomirabilis oxyfera mechanosensitive ion channel protein MscS YP_003206063.1 989638 R 671143 CDS YP_003206064.1 392374231 13100006 complement(990510..991280) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 991280 13100006 DAMO_1169 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206064.1 990510 R 671143 CDS YP_003206065.1 392374232 13100007 complement(991356..991790) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8890153; Product type t : transporter; mechanosensitive channel 991790 mscL 13100007 mscL Candidatus Methylomirabilis oxyfera mechanosensitive channel YP_003206065.1 991356 R 671143 CDS YP_003206066.1 392374233 13100089 991951..992619 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 992619 13100089 DAMO_1171 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206066.1 991951 D 671143 CDS YP_003206067.1 392374234 13100090 complement(992056..992556) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 992556 13100090 DAMO_1172 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206067.1 992056 R 671143 CDS YP_003206068.1 392374235 13100091 complement(992768..992935) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 992935 13100091 DAMO_1173 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206068.1 992768 R 671143 CDS YP_003206069.1 392374236 13100092 993075..994133 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 994133 13100092 DAMO_1174 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206069.1 993075 D 671143 CDS YP_003206070.1 392374237 13100093 994166..994399 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 994399 13100093 DAMO_1175 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206070.1 994166 D 671143 CDS YP_003206071.1 392374238 13100094 994287..995048 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 995048 13100094 DAMO_1176 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206071.1 994287 D 671143 CDS YP_003206072.1 392374239 13100095 complement(995045..995137) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 995137 13100095 DAMO_1177 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206072.1 995045 R 671143 CDS YP_003206073.1 392374240 13100096 complement(995203..996138) 1 NC_013260.1 transposase 996138 13100096 DAMO_1178 Candidatus Methylomirabilis oxyfera transposase YP_003206073.1 995203 R 671143 CDS YP_003206074.1 392374241 13098559 996408..999998 1 NC_013260.1 ribonucleoside-diphosphate reductase 999998 13098559 DAMO_1179 Candidatus Methylomirabilis oxyfera ribonucleoside-diphosphate reductase YP_003206074.1 996408 D 671143 CDS YP_003206075.1 392374242 13100097 1000118..1001185 1 NC_013260.1 Filamentation induced by cAMP protein Fic 1001185 13100097 DAMO_1180 Candidatus Methylomirabilis oxyfera Filamentation induced by cAMP protein Fic YP_003206075.1 1000118 D 671143 CDS YP_003206076.1 392374243 13100098 complement(1001093..1001257) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1001257 13100098 DAMO_1181 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206076.1 1001093 R 671143 CDS YP_003206077.1 392374244 13100099 1001385..1001939 1 NC_013260.1 Deoxycytidine triphosphate deaminase (dCTP deaminase) 1001939 dcd 13100099 dcd Candidatus Methylomirabilis oxyfera Deoxycytidine triphosphate deaminase (dCTP deaminase) YP_003206077.1 1001385 D 671143 CDS YP_003206078.1 392374245 13100100 1002190..1002696 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1002696 13100100 DAMO_1183 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206078.1 1002190 D 671143 CDS YP_003206079.1 392374246 13100101 1002686..1003135 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1003135 13100101 DAMO_1184 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206079.1 1002686 D 671143 CDS YP_003206080.1 392374247 13100102 complement(1003279..1003518) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1003518 13100102 DAMO_1185 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206080.1 1003279 R 671143 CDS YP_003206081.1 392374248 13100103 complement(1003515..1003697) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1003697 13100103 DAMO_1186 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206081.1 1003515 R 671143 CDS YP_003206082.1 392374249 13100104 1003818..1004435 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1004435 13100104 DAMO_1187 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206082.1 1003818 D 671143 CDS YP_003206083.1 392374250 13100105 1004432..1004995 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; OstA-like protein 1004995 13100105 DAMO_1188 Candidatus Methylomirabilis oxyfera OstA-like protein YP_003206083.1 1004432 D 671143 CDS YP_003206084.1 392374251 13100106 1005002..1005727 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 17056748, 7876255, 9298646; Product type pt : putative transporter; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily 1005727 lptB 13100106 lptB Candidatus Methylomirabilis oxyfera lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily YP_003206084.1 1005002 D 671143 CDS YP_003206085.1 392374252 13100107 1005739..1007163 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1991712; Product type f : factor; RNA polymerase sigma-54 factor 1007163 rpoN 13100107 rpoN Candidatus Methylomirabilis oxyfera RNA polymerase sigma-54 factor YP_003206085.1 1005739 D 671143 CDS YP_003206086.1 392374253 13100077 1007205..1007747 1 NC_013260.1 protein DR_1082 1007747 13100077 DAMO_1191 Candidatus Methylomirabilis oxyfera protein DR_1082 YP_003206086.1 1007205 D 671143 CDS YP_003206087.1 392374254 13100108 1007803..1008669 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1008669 13100108 DAMO_1192 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206087.1 1007803 D 671143 CDS YP_003206088.1 392374255 13100109 1008774..1009568 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1009568 13100109 DAMO_1193 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206088.1 1008774 D 671143 CDS YP_003206089.1 392374256 13100110 1009502..1009699 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1009699 13100110 DAMO_1194 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206089.1 1009502 D 671143 CDS YP_003206090.1 392374257 13100111 1009783..1010370 1 NC_013260.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) 1010370 pgsA 13100111 pgsA Candidatus Methylomirabilis oxyfera CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) YP_003206090.1 1009783 D 671143 CDS YP_003206091.1 392374258 13100112 1010393..1011025 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1011025 13100112 DAMO_1196 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206091.1 1010393 D 671143 CDS YP_003206092.1 392374259 13100113 1011035..1012273 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11440130; Product type e : enzyme; aspartokinase 1012273 lysC 13100113 lysC Candidatus Methylomirabilis oxyfera aspartokinase YP_003206092.1 1011035 D 671143 CDS YP_003206093.1 392374260 13098517 1012270..1012674 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1012674 13098517 DAMO_1198 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206093.1 1012270 D 671143 CDS YP_003206094.1 392374261 13098773 1012678..1013415 1 NC_013260.1 segregation and condensation protein A 1013415 scpA 13098773 scpA Candidatus Methylomirabilis oxyfera segregation and condensation protein A YP_003206094.1 1012678 D 671143 CDS YP_003206095.1 392374262 13100114 1013399..1014037 1 NC_013260.1 Segregation and condensation protein B 1014037 scpB 13100114 scpB Candidatus Methylomirabilis oxyfera Segregation and condensation protein B YP_003206095.1 1013399 D 671143 CDS YP_003206096.1 392374263 13100115 1013994..1014842 1 NC_013260.1 RNA pseudouridine synthase 1014842 13100115 DAMO_1201 Candidatus Methylomirabilis oxyfera RNA pseudouridine synthase YP_003206096.1 1013994 D 671143 CDS YP_003206097.1 392374264 13100116 1014869..1015945 1 NC_013260.1 bifunctional chorismate mutase/prephenate dihydratase 1015945 pheA 13100116 pheA Candidatus Methylomirabilis oxyfera bifunctional chorismate mutase/prephenate dihydratase YP_003206097.1 1014869 D 671143 CDS YP_003206098.1 392374265 13100117 1015962..1017098 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; histidinol-phosphate aminotransferase 1017098 hisC 13100117 hisC Candidatus Methylomirabilis oxyfera histidinol-phosphate aminotransferase YP_003206098.1 1015962 D 671143 CDS YP_003206099.1 392374266 13098648 1017108..1018121 1 NC_013260.1 phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) 1018121 aroF 13098648 aroF Candidatus Methylomirabilis oxyfera phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) YP_003206099.1 1017108 D 671143 CDS YP_003206100.1 392374267 13100118 1018118..1019065 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7823907; Product type e : enzyme; protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH); Prephenate dehydrogenase (PDH) 1019065 tyrC 13100118 tyrC Candidatus Methylomirabilis oxyfera protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH); Prephenate dehydrogenase (PDH) YP_003206100.1 1018118 D 671143 CDS YP_003206101.1 392374268 13098525 1019031..1020200 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 2020545, 3040675, 8248183, 8824618, 94068503; Product type pe : putative enzyme; GTPase 1020200 hflX 13098525 hflX Candidatus Methylomirabilis oxyfera GTPase YP_003206101.1 1019031 D 671143 CDS YP_003206102.1 392374269 13100119 1020136..1020768 1 NC_013260.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1020768 13100119 DAMO_1207 Candidatus Methylomirabilis oxyfera CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003206102.1 1020136 D 671143 CDS YP_003206103.1 392374270 13098801 1020832..1022784 1 NC_013260.1 acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) 1022784 acsA 13098801 acsA Candidatus Methylomirabilis oxyfera acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) YP_003206103.1 1020832 D 671143 CDS YP_003206104.1 392374271 13098802 1022810..1024129 1 NC_013260.1 GTP-binding protein engA 1024129 engA 13098802 engA Candidatus Methylomirabilis oxyfera GTP-binding protein engA YP_003206104.1 1022810 D 671143 CDS YP_003206105.1 392374272 13100120 complement(1024471..1025550) 1 NC_013260.1 GTP-binding protein YchF 1025550 13100120 DAMO_1210 Candidatus Methylomirabilis oxyfera GTP-binding protein YchF YP_003206105.1 1024471 R 671143 CDS YP_003206106.1 392374273 13098649 complement(1025679..1025930) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1025930 13098649 DAMO_1211 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206106.1 1025679 R 671143 CDS YP_003206107.1 392374274 13098434 1025900..1026388 1 NC_013260.1 Exonuclease-like protein 1026388 13098434 DAMO_1212 Candidatus Methylomirabilis oxyfera Exonuclease-like protein YP_003206107.1 1025900 D 671143 CDS YP_003206108.1 392374275 13099918 1026372..1027715 1 NC_013260.1 tRNA 2-methylthioadenosine synthase-like protein 1027715 13099918 DAMO_1213 Candidatus Methylomirabilis oxyfera tRNA 2-methylthioadenosine synthase-like protein YP_003206108.1 1026372 D 671143 CDS YP_003206109.1 392374276 13098876 1027712..1028578 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10404592, 8687427; Product type e : enzyme; 5'-methylthioadenosine phosphorylase 1028578 13098876 DAMO_1214 Candidatus Methylomirabilis oxyfera 5'-methylthioadenosine phosphorylase YP_003206109.1 1027712 D 671143 CDS YP_003206110.1 392374277 13098429 1028674..1029582 1 NC_013260.1 PfkB domain-containing protein 1029582 13098429 DAMO_1215 Candidatus Methylomirabilis oxyfera PfkB domain-containing protein YP_003206110.1 1028674 D 671143 CDS YP_003206111.1 392374278 13100121 1029592..1031160 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; propionyl-CoA carboxylase beta chain 1031160 13100121 DAMO_1216 Candidatus Methylomirabilis oxyfera propionyl-CoA carboxylase beta chain YP_003206111.1 1029592 D 671143 CDS YP_003206112.1 392374279 13099892 1031267..1032769 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; acetyl CoA carboxylase, biotin carboxylase subunit 1032769 accC 13099892 accC Candidatus Methylomirabilis oxyfera acetyl CoA carboxylase, biotin carboxylase subunit YP_003206112.1 1031267 D 671143 CDS YP_003206113.1 392374280 13100175 1032766..1033272 1 NC_013260.1 Biotin/lipoic acid binding domain protein 1033272 13100175 DAMO_1218 Candidatus Methylomirabilis oxyfera Biotin/lipoic acid binding domain protein YP_003206113.1 1032766 D 671143 CDS YP_003206114.1 392374281 13100122 1033346..1035067 1 NC_013260.1 methylmalonyl-CoA mutase, N-terminal domain/subunit 1035067 Sbm 13100122 Sbm Candidatus Methylomirabilis oxyfera methylmalonyl-CoA mutase, N-terminal domain/subunit YP_003206114.1 1033346 D 671143 CDS YP_003206115.1 392374282 13100123 1035212..1035622 1 NC_013260.1 methylmalonyl-CoA epimerase 1035622 13100123 DAMO_1220 Candidatus Methylomirabilis oxyfera methylmalonyl-CoA epimerase YP_003206115.1 1035212 D 671143 CDS YP_003206116.1 392374283 13100124 1035849..1037678 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1037678 13100124 DAMO_1221 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206116.1 1035849 D 671143 CDS YP_003206117.1 392374284 13100125 1037841..1039184 1 NC_013260.1 membrane protein involved in aromatic hydrocarbon degradation 1039184 13100125 DAMO_1222 Candidatus Methylomirabilis oxyfera membrane protein involved in aromatic hydrocarbon degradation YP_003206117.1 1037841 D 671143 CDS YP_003206118.1 392374285 13100126 complement(1039181..1039648) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2661540, 9867433; Product type c : carrier; bacterioferritin iron storage homoprotein 1039648 bfr 13100126 bfr Candidatus Methylomirabilis oxyfera bacterioferritin iron storage homoprotein YP_003206118.1 1039181 R 671143 CDS YP_003206119.1 392374286 13100127 complement(1039715..1041487) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1041487 13100127 DAMO_1224 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206119.1 1039715 R 671143 CDS YP_003206120.1 392374287 13100128 1041730..1041984 1 NC_013260.1 molybdopterin converting factor, subunit 1 1041984 13100128 DAMO_1225 Candidatus Methylomirabilis oxyfera molybdopterin converting factor, subunit 1 YP_003206120.1 1041730 D 671143 CDS YP_003206121.1 392374288 13099888 1041977..1042399 1 NC_013260.1 molybdopterin-converting factor subunit 2 (Molybdopterin synthase subunit 2) (MPT synthase subunit 2) (Molybdenum cofactor biosynthesis protein E) (Molybdopterin-converting factor large subunit) 1042399 moaE 13099888 moaE Candidatus Methylomirabilis oxyfera molybdopterin-converting factor subunit 2 (Molybdopterin synthase subunit 2) (MPT synthase subunit 2) (Molybdenum cofactor biosynthesis protein E) (Molybdopterin-converting factor large subunit) YP_003206121.1 1041977 D 671143 CDS YP_003206122.1 392374289 13100129 complement(1042408..1044198) 1 NC_013260.1 acyl-CoA dehydrogenase 1044198 13100129 DAMO_1227 Candidatus Methylomirabilis oxyfera acyl-CoA dehydrogenase YP_003206122.1 1042408 R 671143 CDS YP_003206123.1 392374290 13098800 complement(1044195..1045385) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2883171; Product type e : enzyme; acetyl-CoA acetyltransferase 1045385 pimB 13098800 pimB Candidatus Methylomirabilis oxyfera acetyl-CoA acetyltransferase YP_003206123.1 1044195 R 671143 CDS YP_003206124.1 392374291 13100130 complement(1045508..1045723) 1 NC_013260.1 hypothetical protein 1045723 13100130 DAMO_1229 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206124.1 1045508 R 671143 CDS YP_003206125.1 392374292 13100131 complement(1045750..1047915) 1 NC_013260.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding 1047915 13100131 DAMO_1230 Candidatus Methylomirabilis oxyfera 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_003206125.1 1045750 R 671143 CDS YP_003206126.1 392374293 13100132 complement(1048335..1048529) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1048529 13100132 DAMO_1231 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206126.1 1048335 R 671143 CDS YP_003206127.1 392374294 13100014 complement(1048526..1049044) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1049044 13100014 DAMO_1232 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206127.1 1048526 R 671143 CDS YP_003206128.1 392374295 13100133 complement(1048989..1049456) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1049456 13100133 DAMO_1233 Candidatus Methylomirabilis oxyfera membrane protein YP_003206128.1 1048989 R 671143 CDS YP_003206129.1 392374296 13100134 complement(1049797..1050207) 1 NC_013260.1 PilT protein domain-containing protein 1050207 13100134 DAMO_1234 Candidatus Methylomirabilis oxyfera PilT protein domain-containing protein YP_003206129.1 1049797 R 671143 CDS YP_003206130.1 392374297 13098546 complement(1050220..1050456) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1050456 13098546 DAMO_1235 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206130.1 1050220 R 671143 CDS YP_003206131.1 392374298 13100135 complement(1050622..1052076) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1052076 13100135 DAMO_1236 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206131.1 1050622 R 671143 CDS YP_003206132.1 392374299 13098657 1051820..1052068 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1052068 13098657 DAMO_1237 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206132.1 1051820 D 671143 CDS YP_003206133.1 392374300 13100136 complement(1052148..1053215) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1053215 13100136 DAMO_1238 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206133.1 1052148 R 671143 CDS YP_003206134.1 392374301 13100137 complement(1052921..1053199) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1053199 13100137 DAMO_1239 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206134.1 1052921 R 671143 CDS YP_003206135.1 392374302 13100138 complement(1053345..1053677) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1053677 13100138 DAMO_1240 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206135.1 1053345 R 671143 CDS YP_003206136.1 392374303 13100139 complement(1053711..1053809) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 1053809 13100139 DAMO_1241 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206136.1 1053711 R 671143 CDS YP_003206137.1 392374304 13100140 complement(1054066..1054254) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1054254 13100140 DAMO_1242 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206137.1 1054066 R 671143 CDS YP_003206138.1 392374305 13100141 1054275..1054517 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1054517 13100141 DAMO_1243 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206138.1 1054275 D 671143 CDS YP_003206139.1 392374306 13100142 1054586..1054828 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1054828 13100142 DAMO_1244 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206139.1 1054586 D 671143 CDS YP_003206140.1 392374307 13100143 complement(1054864..1055394) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1055394 13100143 DAMO_1245 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206140.1 1054864 R 671143 CDS YP_003206141.1 392374308 13100144 complement(1054974..1055090) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1055090 13100144 DAMO_1246 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206141.1 1054974 R 671143 CDS YP_003206142.1 392374309 13100145 1055302..1055526 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1055526 13100145 DAMO_1247 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206142.1 1055302 D 671143 CDS YP_003206143.1 392374310 13100146 1055523..1055927 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1055927 13100146 DAMO_1248 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206143.1 1055523 D 671143 CDS YP_003206144.1 392374311 13100147 complement(1055992..1058709) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1058709 13100147 DAMO_1249 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206144.1 1055992 R 671143 CDS YP_003206145.1 392374312 13100148 complement(1058741..1059973) 1 NC_013260.1 2-amino-3-ketobutyrate coenzyme A ligase (AKB ligase) (Glycine C-acetyltransferase) 1059973 kbl 13100148 kbl Candidatus Methylomirabilis oxyfera 2-amino-3-ketobutyrate coenzyme A ligase (AKB ligase) (Glycine C-acetyltransferase) YP_003206145.1 1058741 R 671143 CDS YP_003206146.1 392374313 13100149 complement(1059996..1060271) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1060271 13100149 DAMO_1251 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206146.1 1059996 R 671143 CDS YP_003206147.1 392374314 13100150 complement(1060268..1061971) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; monovalent cation:proton antiporter (CPA2 family) 1061971 13100150 DAMO_1252 Candidatus Methylomirabilis oxyfera monovalent cation:proton antiporter (CPA2 family) YP_003206147.1 1060268 R 671143 CDS YP_003206148.1 392374315 13100151 complement(1061968..1062228) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1062228 13100151 DAMO_1253 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206148.1 1061968 R 671143 CDS YP_003206149.1 392374316 13100152 complement(1062368..1062673) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1062673 13100152 DAMO_1254 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206149.1 1062368 R 671143 CDS YP_003206150.1 392374317 13100153 complement(1062436..1062792) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1062792 13100153 DAMO_1255 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206150.1 1062436 R 671143 CDS YP_003206151.1 392374318 13100154 complement(1062858..1064561) 1 NC_013260.1 Alpha-glucan phosphorylase 1064561 13100154 DAMO_1256 Candidatus Methylomirabilis oxyfera Alpha-glucan phosphorylase YP_003206151.1 1062858 R 671143 CDS YP_003206152.1 392374319 13100155 1064720..1064902 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1064902 13100155 DAMO_1257 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206152.1 1064720 D 671143 CDS YP_003206153.1 392374320 13100156 complement(1064968..1065465) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1065465 13100156 DAMO_1258 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206153.1 1064968 R 671143 CDS YP_003206154.1 392374321 13098482 1065535..1066137 1 NC_013260.1 TetR family transcriptional regulator 1066137 13098482 DAMO_1259 Candidatus Methylomirabilis oxyfera TetR family transcriptional regulator YP_003206154.1 1065535 D 671143 CDS YP_003206155.1 392374322 13100157 1066134..1067357 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Macrolide-specific efflux protein macA 1067357 13100157 DAMO_1260 Candidatus Methylomirabilis oxyfera Macrolide-specific efflux protein macA YP_003206155.1 1066134 D 671143 CDS YP_003206156.1 392374323 13100158 1067360..1070662 1 NC_013260.1 hypothetical protein 1070662 13100158 DAMO_1261 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206156.1 1067360 D 671143 CDS YP_003206157.1 392374324 13100159 complement(1070746..1071003) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1071003 13100159 DAMO_1262 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206157.1 1070746 R 671143 CDS YP_003206158.1 392374325 13100160 1071153..1071518 1 NC_013260.1 NADPH-dependent 7-cyano-7-deazaguanine reductase (7-cyano-7-carbaguanine reductase) (PreQ(0) reductase) (NADPH-dependent nitrile oxidoreductase) 1071518 queF 13100160 queF Candidatus Methylomirabilis oxyfera NADPH-dependent 7-cyano-7-deazaguanine reductase (7-cyano-7-carbaguanine reductase) (PreQ(0) reductase) (NADPH-dependent nitrile oxidoreductase) YP_003206158.1 1071153 D 671143 CDS YP_003206159.1 392374326 13100161 1071915..1073996 1 NC_013260.1 TonB-dependent receptor, plug 1073996 13100161 DAMO_1264 Candidatus Methylomirabilis oxyfera TonB-dependent receptor, plug YP_003206159.1 1071915 D 671143 CDS YP_003206160.1 392374327 13100162 1074000..1074572 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transmembrane protein 1074572 13100162 DAMO_1265 Candidatus Methylomirabilis oxyfera transmembrane protein YP_003206160.1 1074000 D 671143 CDS YP_003206161.1 392374328 13100163 1074574..1076160 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1076160 13100163 DAMO_1266 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206161.1 1074574 D 671143 CDS YP_003206162.1 392374329 13100164 1076162..1076542 1 NC_013260.1 Response regulator receiver protein 1076542 13100164 DAMO_1267 Candidatus Methylomirabilis oxyfera Response regulator receiver protein YP_003206162.1 1076162 D 671143 CDS YP_003206163.1 392374330 13100165 1076752..1076916 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 1076916 13100165 DAMO_1268 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206163.1 1076752 D 671143 CDS YP_003206164.1 392374331 13100166 1076966..1077238 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1077238 13100166 DAMO_1269 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206164.1 1076966 D 671143 CDS YP_003206165.1 392374332 13100167 1077308..1077571 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1077571 13100167 DAMO_1270 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206165.1 1077308 D 671143 CDS YP_003206166.1 392374333 13100168 1077723..1078979 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1078979 13100168 DAMO_1271 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206166.1 1077723 D 671143 CDS YP_003206167.1 392374334 13098709 1079033..1080544 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1080544 13098709 DAMO_1272 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206167.1 1079033 D 671143 CDS YP_003206168.1 392374335 13100169 1080593..1081804 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1081804 13100169 DAMO_1273 Candidatus Methylomirabilis oxyfera membrane protein YP_003206168.1 1080593 D 671143 CDS YP_003206169.1 392374336 13097990 complement(1081821..1082459) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1082459 13097990 DAMO_1274 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206169.1 1081821 R 671143 CDS YP_003206170.1 392374337 13097991 complement(1082634..1084292) 1 NC_013260.1 Anion transporter 1084292 13097991 DAMO_1275 Candidatus Methylomirabilis oxyfera Anion transporter YP_003206170.1 1082634 R 671143 CDS YP_003206171.1 392374338 13097992 complement(1084478..1084543) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1084543 13097992 DAMO_1277 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206171.1 1084478 R 671143 CDS YP_003206172.1 392374339 13097993 1084514..1084621 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1084621 13097993 DAMO_1276 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206172.1 1084514 D 671143 CDS YP_003206173.1 392374340 13097994 complement(1084700..1085170) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1085170 13097994 DAMO_1278 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206173.1 1084700 R 671143 CDS YP_003206174.1 392374341 13097995 complement(1085243..1085908) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1085908 13097995 DAMO_1279 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206174.1 1085243 R 671143 CDS YP_003206175.1 392374342 13097996 complement(1085960..1086553) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1086553 13097996 DAMO_1280 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206175.1 1085960 R 671143 CDS YP_003206176.1 392374343 13097997 complement(1086799..1086951) 1 NC_013260.1 hypothetical protein 1086951 13097997 DAMO_1281 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206176.1 1086799 R 671143 CDS YP_003206177.1 392374344 13097998 complement(1087018..1089234) 1 NC_013260.1 cellulase 1089234 celM 13097998 celM Candidatus Methylomirabilis oxyfera cellulase YP_003206177.1 1087018 R 671143 CDS YP_003206178.1 392374345 13097999 complement(1089231..1089395) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1089395 13097999 DAMO_1283 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206178.1 1089231 R 671143 CDS YP_003206179.1 392374346 13098000 complement(1089404..1089907) 1 NC_013260.1 rubrerythrin 1089907 13098000 DAMO_1284 Candidatus Methylomirabilis oxyfera rubrerythrin YP_003206179.1 1089404 R 671143 CDS YP_003206180.1 392374347 13098002 complement(1090052..1090327) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1090327 13098002 DAMO_1285 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206180.1 1090052 R 671143 CDS YP_003206181.1 392374348 13098001 complement(1090431..1090697) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1090697 13098001 DAMO_1286 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206181.1 1090431 R 671143 CDS YP_003206182.1 392374349 13098003 1090907..1092085 1 NC_013260.1 transposase 1092085 13098003 DAMO_1287 Candidatus Methylomirabilis oxyfera transposase YP_003206182.1 1090907 D 671143 CDS YP_003206183.1 392374350 13098004 complement(1092148..1092861) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1092861 13098004 DAMO_1288 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206183.1 1092148 R 671143 CDS YP_003206184.1 392374351 13098005 complement(1092846..1093043) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1093043 13098005 DAMO_1289 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206184.1 1092846 R 671143 CDS YP_003206185.1 392374352 13098006 complement(1093046..1093201) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1093201 13098006 DAMO_1290 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206185.1 1093046 R 671143 CDS YP_003206186.1 392374353 13100039 1093294..1093443 1 NC_013260.1 hypothetical protein 1093443 13100039 DAMO_1291 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206186.1 1093294 D 671143 CDS YP_003206187.1 392374354 13098007 complement(1093303..1096491) 1 NC_013260.1 error-prone DNA polymerase 1096491 dnaE 13098007 dnaE Candidatus Methylomirabilis oxyfera error-prone DNA polymerase YP_003206187.1 1093303 R 671143 CDS YP_003206188.1 392374355 13098008 complement(1096628..1098106) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1098106 13098008 DAMO_1293 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206188.1 1096628 R 671143 CDS YP_003206189.1 392374356 13098009 complement(1098123..1098767) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1098767 13098009 DAMO_1294 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206189.1 1098123 R 671143 CDS YP_003206190.1 392374357 13098010 complement(1098807..1099565) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1099565 13098010 DAMO_1295 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206190.1 1098807 R 671143 CDS YP_003206191.1 392374358 13098011 1099455..1099691 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1099691 13098011 DAMO_1296 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206191.1 1099455 D 671143 CDS YP_003206192.1 392374359 13098012 complement(1099702..1100295) 1 NC_013260.1 LexA repressor 1100295 lexA 13098012 lexA Candidatus Methylomirabilis oxyfera LexA repressor YP_003206192.1 1099702 R 671143 CDS YP_003206193.1 392374360 13098013 complement(1100514..1101881) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator 1101881 13098013 DAMO_1298 Candidatus Methylomirabilis oxyfera response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator YP_003206193.1 1100514 R 671143 CDS YP_003206194.1 392374361 13098014 complement(1101878..1102198) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1102198 13098014 DAMO_1299 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206194.1 1101878 R 671143 CDS YP_003206195.1 392374362 13098015 complement(1102192..1103850) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1103850 13098015 DAMO_1300 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206195.1 1102192 R 671143 CDS YP_003206196.1 392374363 13100085 1104096..1104308 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1104308 13100085 DAMO_1301 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206196.1 1104096 D 671143 CDS YP_003206197.1 392374364 13098016 1104256..1105479 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1105479 13098016 DAMO_1302 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206197.1 1104256 D 671143 CDS YP_003206198.1 392374365 13098017 1105555..1105782 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1105782 13098017 DAMO_1303 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206198.1 1105555 D 671143 CDS YP_003206199.1 392374366 13098018 1105779..1107203 1 NC_013260.1 patatin 1107203 13098018 DAMO_1304 Candidatus Methylomirabilis oxyfera patatin YP_003206199.1 1105779 D 671143 CDS YP_003206200.1 392374367 13098019 1107248..1107469 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1107469 13098019 DAMO_1305 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206200.1 1107248 D 671143 CDS YP_003206201.1 392374368 13098504 complement(1107479..1107640) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1107640 13098504 DAMO_1306 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206201.1 1107479 R 671143 CDS YP_003206202.1 392374369 13098020 1107815..1108057 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1108057 13098020 DAMO_1307 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206202.1 1107815 D 671143 CDS YP_003206203.1 392374370 13098021 complement(1108181..1109131) 1 NC_013260.1 hypothetical protein 1109131 13098021 DAMO_1308 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206203.1 1108181 R 671143 CDS YP_003206204.1 392374371 13098022 1109393..1109830 1 NC_013260.1 transposase 1109830 13098022 DAMO_1309 Candidatus Methylomirabilis oxyfera transposase YP_003206204.1 1109393 D 671143 CDS YP_003206205.1 392374372 13098023 complement(1109802..1110101) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1110101 13098023 DAMO_1310 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206205.1 1109802 R 671143 CDS YP_003206206.1 392374373 13098024 complement(1110174..1111346) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1111346 13098024 DAMO_1311 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206206.1 1110174 R 671143 CDS YP_003206207.1 392374374 13098025 1111319..1111738 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1111738 13098025 DAMO_1312 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206207.1 1111319 D 671143 CDS YP_003206208.1 392374375 13098026 complement(1112171..1113310) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1113310 13098026 DAMO_1313 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206208.1 1112171 R 671143 CDS YP_003206209.1 392374376 13098027 complement(1113550..1113729) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1113729 13098027 DAMO_1314 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206209.1 1113550 R 671143 CDS YP_003206210.1 392374377 13098028 complement(1113650..1113820) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1113820 13098028 DAMO_1315 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206210.1 1113650 R 671143 CDS YP_003206211.1 392374378 13098029 complement(1113792..1115195) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12324339, 1885559, 2001989, 8510650; Product type r : regulator; two component sigma-54-dependent hydrogenase transcriptional regulator, Fis family 1115195 hoxA 13098029 hoxA Candidatus Methylomirabilis oxyfera two component sigma-54-dependent hydrogenase transcriptional regulator, Fis family YP_003206211.1 1113792 R 671143 CDS YP_003206212.1 392374379 13098030 complement(1115212..1117275) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1117275 13098030 DAMO_1317 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206212.1 1115212 R 671143 CDS YP_003206213.1 392374380 13098031 complement(1117470..1117796) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1117796 13098031 DAMO_1318 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206213.1 1117470 R 671143 CDS YP_003206214.1 392374381 13098032 complement(1117850..1121512) 1 NC_013260.1 TPR repeat protein 1121512 13098032 DAMO_1319 Candidatus Methylomirabilis oxyfera TPR repeat protein YP_003206214.1 1117850 R 671143 CDS YP_003206215.1 392374382 13098033 complement(1121668..1121937) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1121937 13098033 DAMO_1320 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206215.1 1121668 R 671143 CDS YP_003206216.1 392374383 13098034 complement(1122694..1123047) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1123047 13098034 DAMO_1321 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206216.1 1122694 R 671143 CDS YP_003206217.1 392374384 13098035 complement(1123025..1123552) 1 NC_013260.1 hypothetical protein 1123552 13098035 DAMO_1322 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206217.1 1123025 R 671143 CDS YP_003206218.1 392374385 13098036 1123837..1123935 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1123935 13098036 DAMO_1323 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206218.1 1123837 D 671143 CDS YP_003206219.1 392374386 13098037 complement(1124023..1124367) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1124367 13098037 DAMO_1324 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206219.1 1124023 R 671143 CDS YP_003206220.1 392374387 13098446 complement(1124508..1125635) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1125635 13098446 DAMO_1325 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206220.1 1124508 R 671143 CDS YP_003206221.1 392374388 13098038 1126277..1127332 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1896024, 8587109, 9187054; Product type e : enzyme; recombinase A 1127332 recA 13098038 recA Candidatus Methylomirabilis oxyfera recombinase A YP_003206221.1 1126277 D 671143 CDS YP_003206222.1 392374389 13098039 1127487..1128626 1 NC_013260.1 Twitching mobility protein 1128626 pilT 13098039 pilT Candidatus Methylomirabilis oxyfera Twitching mobility protein YP_003206222.1 1127487 D 671143 CDS YP_003206223.1 392374390 13098040 1128719..1129084 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1129084 13098040 DAMO_1328 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206223.1 1128719 D 671143 CDS YP_003206224.1 392374391 13098041 1129099..1131759 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7773747, 8274143; Product type e : enzyme; alanyl-tRNA synthetase 1131759 alaS 13098041 alaS Candidatus Methylomirabilis oxyfera alanyl-tRNA synthetase YP_003206224.1 1129099 D 671143 CDS YP_003206225.1 392374392 13098042 1131841..1132086 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1132086 13098042 DAMO_1330 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206225.1 1131841 D 671143 CDS YP_003206226.1 392374393 13098043 complement(1132199..1132843) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1132843 13098043 DAMO_1331 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206226.1 1132199 R 671143 CDS YP_003206227.1 392374394 13098044 1132331..1132528 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1132528 13098044 DAMO_1332 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206227.1 1132331 D 671143 CDS YP_003206228.1 392374395 13098045 complement(1132827..1133843) 1 NC_013260.1 modification methylase BglI (M.BglI) (N(4)-cytosine-specific methyltransferase BglI) (BglI modification methyltransferase) 1133843 bglIM 13098045 bglIM Candidatus Methylomirabilis oxyfera modification methylase BglI (M.BglI) (N(4)-cytosine-specific methyltransferase BglI) (BglI modification methyltransferase) YP_003206228.1 1132827 R 671143 CDS YP_003206229.1 392374396 13098046 complement(1133840..1134013) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1134013 13098046 DAMO_1334 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206229.1 1133840 R 671143 CDS YP_003206230.1 392374397 13098716 1134198..1134821 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1134821 13098716 DAMO_1335 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206230.1 1134198 D 671143 CDS YP_003206231.1 392374398 13098656 complement(1134606..1134809) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1134809 13098656 DAMO_1336 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206231.1 1134606 R 671143 CDS YP_003206232.1 392374399 13098047 1134818..1136050 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1136050 13098047 DAMO_1337 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206232.1 1134818 D 671143 CDS YP_003206233.1 392374400 13099897 1136123..1136953 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1136953 13099897 DAMO_1338 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206233.1 1136123 D 671143 CDS YP_003206234.1 392374401 13098048 1137160..1137786 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 1495415; Product type pe : putative enzyme; phosphatidylserine decarboxylase 1137786 psd 13098048 psd Candidatus Methylomirabilis oxyfera phosphatidylserine decarboxylase YP_003206234.1 1137160 D 671143 CDS YP_003206235.1 392374402 13098049 1137783..1138583 1 NC_013260.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 1138583 13098049 DAMO_1340 Candidatus Methylomirabilis oxyfera CDP-diacylglycerol--serine O-phosphatidyltransferase YP_003206235.1 1137783 D 671143 CDS YP_003206236.1 392374403 13098050 1138690..1140237 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12070767, 15159544; Product type e : enzyme; 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) 1140237 leuA 13098050 leuA Candidatus Methylomirabilis oxyfera 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) YP_003206236.1 1138690 D 671143 CDS YP_003206237.1 392374404 13100015 1140256..1141275 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10369777; Product type e : enzyme; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) 1141275 asd 13100015 asd Candidatus Methylomirabilis oxyfera Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) YP_003206237.1 1140256 D 671143 CDS YP_003206238.1 392374405 13098051 1141467..1142258 1 NC_013260.1 tRNA pseudouridine synthase A 1142258 truA 13098051 truA Candidatus Methylomirabilis oxyfera tRNA pseudouridine synthase A YP_003206238.1 1141467 D 671143 CDS YP_003206239.1 392374406 13098052 1142319..1143914 1 NC_013260.1 Multicopper oxidase family protein 1143914 13098052 DAMO_1344 Candidatus Methylomirabilis oxyfera Multicopper oxidase family protein YP_003206239.1 1142319 D 671143 CDS YP_003206240.1 392374407 13098053 1143967..1145034 1 NC_013260.1 DSBA oxidoreductase 1145034 13098053 DAMO_1345 Candidatus Methylomirabilis oxyfera DSBA oxidoreductase YP_003206240.1 1143967 D 671143 CDS YP_003206241.1 392374408 13098054 1145059..1145298 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1145298 13098054 DAMO_1346 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206241.1 1145059 D 671143 CDS YP_003206242.1 392374409 13098055 1145300..1145761 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cyclase 1145761 13098055 DAMO_1347 Candidatus Methylomirabilis oxyfera cyclase YP_003206242.1 1145300 D 671143 CDS YP_003206243.1 392374410 13098681 complement(1145852..1147765) 1 NC_013260.1 hypothetical protein 1147765 13098681 DAMO_1348 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206243.1 1145852 R 671143 CDS YP_003206244.1 392374411 13098056 1147877..1148248 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1148248 13098056 DAMO_1349 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206244.1 1147877 D 671143 CDS YP_003206245.1 392374412 13098499 1148500..1148973 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1148973 13098499 DAMO_1350 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206245.1 1148500 D 671143 CDS YP_003206246.1 392374413 13099923 complement(1149038..1149361) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1149361 13099923 DAMO_1351 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206246.1 1149038 R 671143 CDS YP_003206247.1 392374414 13098867 1149113..1149244 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1149244 13098867 DAMO_1352 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206247.1 1149113 D 671143 CDS YP_003206248.1 392374415 13098057 1149342..1149545 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1149545 13098057 DAMO_1353 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206248.1 1149342 D 671143 CDS YP_003206249.1 392374416 13098058 1149848..1150318 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1150318 13098058 DAMO_1354 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206249.1 1149848 D 671143 CDS YP_003206250.1 392374417 13098059 1150296..1152890 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3320963; Product type e : enzyme; leucine tRNA synthetase 1152890 leuS 13098059 leuS Candidatus Methylomirabilis oxyfera leucine tRNA synthetase YP_003206250.1 1150296 D 671143 CDS YP_003206251.1 392374418 13098060 1152887..1153393 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1153393 13098060 DAMO_1356 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206251.1 1152887 D 671143 CDS YP_003206252.1 392374419 13098061 1153393..1154400 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; DNA polymerase III, delta subunit 1154400 13098061 DAMO_1357 Candidatus Methylomirabilis oxyfera DNA polymerase III, delta subunit YP_003206252.1 1153393 D 671143 CDS YP_003206253.1 392374420 13098062 complement(1154404..1154676) 1 NC_013260.1 30S ribosomal protein S20 1154676 rpsT 13098062 rpsT Candidatus Methylomirabilis oxyfera 30S ribosomal protein S20 YP_003206253.1 1154404 R 671143 CDS YP_003206254.1 392374421 13098063 1154782..1155033 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 1155033 13098063 DAMO_1359 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206254.1 1154782 D 671143 CDS YP_003206255.1 392374422 13098064 1155065..1156384 1 NC_013260.1 Virulence factor protein 1156384 13098064 DAMO_1360 Candidatus Methylomirabilis oxyfera Virulence factor protein YP_003206255.1 1155065 D 671143 CDS YP_003206256.1 392374423 13098065 1156525..1158267 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6308579; Product type e : enzyme; acetolactate synthase large subunit (AHAS) (Acetohydroxy-acid synthase large subunit) (ALS) 1158267 ilvI 13098065 ilvI Candidatus Methylomirabilis oxyfera acetolactate synthase large subunit (AHAS) (Acetohydroxy-acid synthase large subunit) (ALS) YP_003206256.1 1156525 D 671143 CDS YP_003206257.1 392374424 13098066 1158264..1158881 1 NC_013260.1 acetolactate synthase small subunit (Acetohydroxy-acid synthase small subunit) (AHAS) (ALS) 1158881 ilvH 13098066 ilvH Candidatus Methylomirabilis oxyfera acetolactate synthase small subunit (Acetohydroxy-acid synthase small subunit) (AHAS) (ALS) YP_003206257.1 1158264 D 671143 CDS YP_003206258.1 392374425 13098067 1158898..1159902 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1744032; Product type e : enzyme; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) 1159902 ilvC 13098067 ilvC Candidatus Methylomirabilis oxyfera Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) YP_003206258.1 1158898 D 671143 CDS YP_003206259.1 392374426 13098503 1160097..1160969 1 NC_013260.1 5,10-methylenetetrahydrofolate reductase 1160969 metF 13098503 metF Candidatus Methylomirabilis oxyfera 5,10-methylenetetrahydrofolate reductase YP_003206259.1 1160097 D 671143 CDS YP_003206260.1 392374427 13098068 complement(1160988..1161266) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1161266 13098068 DAMO_1365 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206260.1 1160988 R 671143 CDS YP_003206261.1 392374428 13098069 1161178..1162122 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; tRNA delta(2)-isopentenylpyrophosphate transferase 1162122 miaA 13098069 miaA Candidatus Methylomirabilis oxyfera tRNA delta(2)-isopentenylpyrophosphate transferase YP_003206261.1 1161178 D 671143 CDS YP_003206262.1 392374429 13098791 1162128..1163432 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12835912; Product type e : enzyme; 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) 1163432 aroA 13098791 aroA Candidatus Methylomirabilis oxyfera 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) YP_003206262.1 1162128 D 671143 CDS YP_003206263.1 392374430 13098070 1163518..1164219 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) 1164219 cmk 13098070 cmk Candidatus Methylomirabilis oxyfera cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) YP_003206263.1 1163518 D 671143 CDS YP_003206264.1 392374431 13098071 1164265..1164981 1 NC_013260.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 1164981 13098071 DAMO_1369 Candidatus Methylomirabilis oxyfera 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003206264.1 1164265 D 671143 CDS YP_003206265.1 392374432 13098469 1165053..1166786 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3368316; Product type s : structure; 30S ribosomal protein S1 1166786 rpsA 13098469 rpsA Candidatus Methylomirabilis oxyfera 30S ribosomal protein S1 YP_003206265.1 1165053 D 671143 CDS YP_003206266.1 392374433 13098468 1166805..1167677 1 NC_013260.1 Signal peptide peptidase SppA, 36K type 1167677 13098468 DAMO_1371 Candidatus Methylomirabilis oxyfera Signal peptide peptidase SppA, 36K type YP_003206266.1 1166805 D 671143 CDS YP_003206267.1 392374434 13098465 complement(1167645..1168034) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1168034 13098465 DAMO_1372 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206267.1 1167645 R 671143 CDS YP_003206268.1 392374435 13098535 1167693..1168016 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15659673, 8892836, 9171434; Product type f : factor; integration host factor subunit beta 1168016 ihfB 13098535 ihfB Candidatus Methylomirabilis oxyfera integration host factor subunit beta YP_003206268.1 1167693 D 671143 CDS YP_003206269.1 392374436 13098072 1168346..1168804 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1168804 13098072 DAMO_1374 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206269.1 1168346 D 671143 CDS YP_003206270.1 392374437 13098542 1168818..1169303 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1169303 13098542 DAMO_1375 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206270.1 1168818 D 671143 CDS YP_003206271.1 392374438 13099915 complement(1169648..1170355) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1170355 13099915 DAMO_1376 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206271.1 1169648 R 671143 CDS YP_003206272.1 392374439 13098073 complement(1170503..1171024) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; adenine phosphoribosyltransferase 1171024 apt 13098073 apt Candidatus Methylomirabilis oxyfera adenine phosphoribosyltransferase YP_003206272.1 1170503 R 671143 CDS YP_003206273.1 392374440 13098775 complement(1170954..1171169) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1171169 13098775 DAMO_1378 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206273.1 1170954 R 671143 CDS YP_003206274.1 392374441 13098075 complement(1171223..1171864) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1860862; Product type e : enzyme; protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) 1171864 pcm 13098075 pcm Candidatus Methylomirabilis oxyfera protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) YP_003206274.1 1171223 R 671143 CDS YP_003206275.1 392374442 13098463 complement(1171913..1172701) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase)(survival protein, protein damage control) 1172701 surE 13098463 surE Candidatus Methylomirabilis oxyfera 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase)(survival protein, protein damage control) YP_003206275.1 1171913 R 671143 CDS YP_003206276.1 392374443 13098077 complement(1172866..1173261) 1 NC_013260.1 hypothetical protein 1173261 13098077 DAMO_1381 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206276.1 1172866 R 671143 CDS YP_003206277.1 392374444 13098078 complement(1173307..1173588) 1 NC_013260.1 DNA-binding protein HU (DNA-binding protein II) (HB) 1173588 hup 13098078 hup Candidatus Methylomirabilis oxyfera DNA-binding protein HU (DNA-binding protein II) (HB) YP_003206277.1 1173307 R 671143 CDS YP_003206278.1 392374445 13099874 complement(1173753..1175177) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1175177 13099874 DAMO_1383 Candidatus Methylomirabilis oxyfera membrane protein YP_003206278.1 1173753 R 671143 CDS YP_003206279.1 392374446 13099905 complement(1175208..1176866) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1176866 13099905 DAMO_1384 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206279.1 1175208 R 671143 CDS YP_003206280.1 392374447 13098079 complement(1176826..1177617) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Fe-S oxidoreductase 1177617 13098079 DAMO_1385 Candidatus Methylomirabilis oxyfera Fe-S oxidoreductase YP_003206280.1 1176826 R 671143 CDS YP_003206281.1 392374448 13099873 complement(1177614..1178180) 1 NC_013260.1 hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) 1178180 hpt 13099873 hpt Candidatus Methylomirabilis oxyfera hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) YP_003206281.1 1177614 R 671143 CDS YP_003206282.1 392374449 13098635 complement(1178214..1179530) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1179530 13098635 DAMO_1387 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206282.1 1178214 R 671143 CDS YP_003206283.1 392374450 13098831 complement(1179533..1180738) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 1990006, 4623131; Product type e : enzyme; aspartate aminotransferase A (AspAT) 1180738 aatA 13098831 aatA Candidatus Methylomirabilis oxyfera aspartate aminotransferase A (AspAT) YP_003206283.1 1179533 R 671143 CDS YP_003206284.1 392374451 13099872 complement(1180779..1181264) 1 NC_013260.1 phosphopantetheine adenylyltransferase (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase) 1181264 coaD 13099872 coaD Candidatus Methylomirabilis oxyfera phosphopantetheine adenylyltransferase (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase) YP_003206284.1 1180779 R 671143 CDS YP_003206285.1 392374452 13098080 complement(1181261..1181818) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; methyltransferase 1181818 yhhF 13098080 yhhF Candidatus Methylomirabilis oxyfera methyltransferase YP_003206285.1 1181261 R 671143 CDS YP_003206286.1 392374453 13098457 complement(1181969..1182058) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1182058 13098457 DAMO_1391 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206286.1 1181969 R 671143 CDS YP_003206287.1 392374454 13098081 complement(1182205..1184343) 1 NC_013260.1 GTP pyrophosphokinase 1184343 relA 13098081 relA Candidatus Methylomirabilis oxyfera GTP pyrophosphokinase YP_003206287.1 1182205 R 671143 CDS YP_003206288.1 392374455 13098082 complement(1184491..1185078) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1185078 13098082 DAMO_1393 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206288.1 1184491 R 671143 CDS YP_003206289.1 392374456 13098083 complement(1185117..1186313) 1 NC_013260.1 Extracellular ligand-binding receptor 1186313 13098083 DAMO_1394 Candidatus Methylomirabilis oxyfera Extracellular ligand-binding receptor YP_003206289.1 1185117 R 671143 CDS YP_003206290.1 392374457 13098449 complement(1186327..1187031) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2120183, 2195019, 3009409; Product type t : transporter; high-affinity branched-chain amino acid ABC transporter (ATP-binding protein) 1187031 livF 13098449 livF Candidatus Methylomirabilis oxyfera high-affinity branched-chain amino acid ABC transporter (ATP-binding protein) YP_003206290.1 1186327 R 671143 CDS YP_003206291.1 392374458 13098084 complement(1187024..1189114) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type t : transporter; branched-chain amino acid ABC transporter permease/ATP-binding protein 1189114 13098084 DAMO_1396 Candidatus Methylomirabilis oxyfera branched-chain amino acid ABC transporter permease/ATP-binding protein YP_003206291.1 1187024 R 671143 CDS YP_003206292.1 392374459 13099887 complement(1189417..1190319) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2120183, 2195019, 3009409; Product type t : transporter; high-affinity branched-chain amino acid ABC transporter permease 1190319 livH 13099887 livH Candidatus Methylomirabilis oxyfera high-affinity branched-chain amino acid ABC transporter permease YP_003206292.1 1189417 R 671143 CDS YP_003206293.1 392374460 13100052 complement(1190394..1191506) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2120183, 2195019, 3009409; Product type t : transporter; high-affinity branched-chain amino acid ABC transporter (substrate-binding protein) 1191506 livK 13100052 livK Candidatus Methylomirabilis oxyfera high-affinity branched-chain amino acid ABC transporter (substrate-binding protein) YP_003206293.1 1190394 R 671143 CDS YP_003206294.1 392374461 13098905 complement(1191659..1192303) 1 NC_013260.1 thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) 1192303 thiE 13098905 thiE Candidatus Methylomirabilis oxyfera thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) YP_003206294.1 1191659 R 671143 CDS YP_003206295.1 392374462 13098085 complement(1192309..1192869) 1 NC_013260.1 elongation factor P 1192869 efp 13098085 efp Candidatus Methylomirabilis oxyfera elongation factor P YP_003206295.1 1192309 R 671143 CDS YP_003206296.1 392374463 13098720 complement(1192909..1193379) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11937054, 2306211; Product type e : enzyme; 3-dehydroquinate dehydratase type 2 1193379 aroQ 13098720 aroQ Candidatus Methylomirabilis oxyfera 3-dehydroquinate dehydratase type 2 YP_003206296.1 1192909 R 671143 CDS YP_003206297.1 392374464 13098509 complement(1195004..1196167) 1 NC_013260.1 chorismate synthase 1196167 aroC 13098509 aroC Candidatus Methylomirabilis oxyfera chorismate synthase YP_003206297.1 1195004 R 671143 CDS YP_003206298.1 392374465 13098088 complement(1196172..1196984) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1196984 13098088 DAMO_1405 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206298.1 1196172 R 671143 CDS YP_003206299.1 392374466 13098510 complement(1196969..1197154) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1197154 13098510 DAMO_1406 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206299.1 1196969 R 671143 CDS YP_003206300.1 392374467 13098511 complement(1197087..1197953) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1197953 13098511 DAMO_1407 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206300.1 1197087 R 671143 CDS YP_003206301.1 392374468 13098840 complement(1198000..1200294) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1200294 13098840 DAMO_1408 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206301.1 1198000 R 671143 CDS YP_003206302.1 392374469 13100174 complement(1200453..1200947) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1200947 13100174 DAMO_1409 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206302.1 1200453 R 671143 CDS YP_003206303.1 392374470 13099920 complement(1200919..1201539) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1201539 13099920 DAMO_1410 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206303.1 1200919 R 671143 CDS YP_003206304.1 392374471 13098089 complement(1201555..1202097) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Pili assembly protein 1202097 13098089 DAMO_1411 Candidatus Methylomirabilis oxyfera Pili assembly protein YP_003206304.1 1201555 R 671143 CDS YP_003206305.1 392374472 13098090 complement(1202094..1203164) 1 NC_013260.1 type IV pilus assembly protein PilM 1203164 13098090 DAMO_1412 Candidatus Methylomirabilis oxyfera type IV pilus assembly protein PilM YP_003206305.1 1202094 R 671143 CDS YP_003206306.1 392374473 13099916 complement(1203388..1204188) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10511537, 2828322; Product type e : enzyme; tryptophan synthase alpha chain 1204188 trpA 13099916 trpA Candidatus Methylomirabilis oxyfera tryptophan synthase alpha chain YP_003206306.1 1203388 R 671143 CDS YP_003206307.1 392374474 13098091 complement(1204231..1205466) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10511537, 2828322; Product type e : enzyme; tryptophan synthase subunit beta 1205466 trpB 13098091 trpB Candidatus Methylomirabilis oxyfera tryptophan synthase subunit beta YP_003206307.1 1204231 R 671143 CDS YP_003206308.1 392374475 13098092 complement(1205435..1206058) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2184433, 2828322; Product type e : enzyme; N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) 1206058 trpF 13098092 trpF Candidatus Methylomirabilis oxyfera N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) YP_003206308.1 1205435 R 671143 CDS YP_003206309.1 392374476 13098093 complement(1206072..1206875) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2184433, 9061023; Product type e : enzyme; indole-3-glycerol-phosphate synthase (IGPS) 1206875 trpC 13098093 trpC Candidatus Methylomirabilis oxyfera indole-3-glycerol-phosphate synthase (IGPS) YP_003206309.1 1206072 R 671143 CDS YP_003206310.1 392374477 13098094 complement(1206901..1207998) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12093726, 12923085, 9061023; Product type e : enzyme; anthranilate phosphoribosyltransferase 1207998 trpD 13098094 trpD Candidatus Methylomirabilis oxyfera anthranilate phosphoribosyltransferase YP_003206310.1 1206901 R 671143 CDS YP_003206311.1 392374478 13098097 complement(1210243..1210572) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type c : carrier; thioredoxin 1, redox factor 1210572 trxA 13098097 trxA Candidatus Methylomirabilis oxyfera thioredoxin 1, redox factor YP_003206311.1 1210243 R 671143 CDS YP_003206312.1 392374479 13098098 complement(1210862..1211965) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1211965 13098098 DAMO_1421 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206312.1 1210862 R 671143 CDS YP_003206313.1 392374480 13098859 1212447..1213187 1 NC_013260.1 ribonuclease 3 1213187 rnc 13098859 rnc Candidatus Methylomirabilis oxyfera ribonuclease 3 YP_003206313.1 1212447 D 671143 CDS YP_003206314.1 392374481 13098860 1213105..1213290 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1213290 13098860 DAMO_1423 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206314.1 1213105 D 671143 CDS YP_003206315.1 392374482 13098865 1213327..1216926 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Chromosome partition protein smc 1216926 13098865 DAMO_1424 Candidatus Methylomirabilis oxyfera Chromosome partition protein smc YP_003206315.1 1213327 D 671143 CDS YP_003206316.1 392374483 13098861 1216951..1217895 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9002525; Product type t : transporter; cell division transporter substrate-binding protein FtsY (Signal recognition particle receptor) 1217895 ftsY 13098861 ftsY Candidatus Methylomirabilis oxyfera cell division transporter substrate-binding protein FtsY (Signal recognition particle receptor) YP_003206316.1 1216951 D 671143 CDS YP_003206317.1 392374484 13098862 1218080..1219198 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9068650; Product type e : enzyme; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino) uracil reductase 1219198 ribD 13098862 ribD Candidatus Methylomirabilis oxyfera bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino) uracil reductase YP_003206317.1 1218080 D 671143 CDS YP_003206318.1 392374485 13098863 1219208..1219858 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 9068650; Product type e : enzyme; riboflavin synthase subunit alpha 1219858 ribC 13098863 ribC Candidatus Methylomirabilis oxyfera riboflavin synthase subunit alpha YP_003206318.1 1219208 D 671143 CDS YP_003206319.1 392374486 13098864 1219881..1221095 1 NC_013260.1 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase 1221095 ribBA 13098864 ribBA Candidatus Methylomirabilis oxyfera 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase YP_003206319.1 1219881 D 671143 CDS YP_003206320.1 392374487 13098869 1221195..1221659 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 10488170; Product type e : enzyme; riboflavin synthase, beta chain 1221659 ribH 13098869 ribH Candidatus Methylomirabilis oxyfera riboflavin synthase, beta chain YP_003206320.1 1221195 D 671143 CDS YP_003206321.1 392374488 13098099 1221696..1222127 1 NC_013260.1 N utilization substance protein B 1222127 nusB 13098099 nusB Candidatus Methylomirabilis oxyfera N utilization substance protein B YP_003206321.1 1221696 D 671143 CDS YP_003206322.1 392374489 13098735 complement(1222193..1222540) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1222540 13098735 DAMO_1431 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206322.1 1222193 R 671143 CDS YP_003206323.1 392374490 13098100 complement(1222727..1223278) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1223278 13098100 DAMO_1432 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206323.1 1222727 R 671143 CDS YP_003206324.1 392374491 13098101 complement(1223335..1224555) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; 3-oxoacyl-[acyl-carrier-protein] synthase II 1224555 fabF 13098101 fabF Candidatus Methylomirabilis oxyfera 3-oxoacyl-[acyl-carrier-protein] synthase II YP_003206324.1 1223335 R 671143 CDS YP_003206325.1 392374492 13100230 complement(1224627..1224872) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type c : carrier; acyl carrier protein (ACP) 1224872 13100230 DAMO_1434 Candidatus Methylomirabilis oxyfera acyl carrier protein (ACP) YP_003206325.1 1224627 R 671143 CDS YP_003206326.1 392374493 13098728 complement(1224930..1225688) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; 3-oxoacyl-ACP reductase 1225688 fabG 13098728 fabG Candidatus Methylomirabilis oxyfera 3-oxoacyl-ACP reductase YP_003206326.1 1224930 R 671143 CDS YP_003206327.1 392374494 13098727 complement(1225688..1226578) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; Malonyl CoA-acyl carrier protein transacylase (MCT) 1226578 fabD 13098727 fabD Candidatus Methylomirabilis oxyfera Malonyl CoA-acyl carrier protein transacylase (MCT) YP_003206327.1 1225688 R 671143 CDS YP_003206328.1 392374495 13098726 complement(1226648..1227631) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11243824; Product type e : enzyme; 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III)(KAS III) 1227631 fabH 13098726 fabH Candidatus Methylomirabilis oxyfera 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III)(KAS III) YP_003206328.1 1226648 R 671143 CDS YP_003206329.1 392374496 13098729 complement(1227648..1228619) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type ph : phenotype; fatty acid/phospholipid synthesis protein, methyltransferase domain 1228619 plsX 13098729 plsX Candidatus Methylomirabilis oxyfera fatty acid/phospholipid synthesis protein, methyltransferase domain YP_003206329.1 1227648 R 671143 CDS YP_003206330.1 392374497 13098625 1228146..1228892 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1228892 13098625 DAMO_1439 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206330.1 1228146 D 671143 CDS YP_003206331.1 392374498 13098102 complement(1228884..1229393) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1229393 13098102 DAMO_1440 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206331.1 1228884 R 671143 CDS YP_003206332.1 392374499 13098103 complement(1229484..1229930) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; nucleoside diphosphate kinase (NDK) (NDP kinase) (Nucleoside-2-P kinase) 1229930 ndk 13098103 ndk Candidatus Methylomirabilis oxyfera nucleoside diphosphate kinase (NDK) (NDP kinase) (Nucleoside-2-P kinase) YP_003206332.1 1229484 R 671143 CDS YP_003206333.1 392374500 13100182 complement(1229972..1230841) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3002435, 8144675; Product type e : enzyme; succinyl-CoA synthetase subunit alpha 1230841 sucD 13100182 sucD Candidatus Methylomirabilis oxyfera succinyl-CoA synthetase subunit alpha YP_003206333.1 1229972 R 671143 CDS YP_003206334.1 392374501 13098104 complement(1230850..1232028) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3002435, 8144675; Product type e : enzyme; succinyl-CoA synthetase subunit beta 1232028 sucC 13098104 sucC Candidatus Methylomirabilis oxyfera succinyl-CoA synthetase subunit beta YP_003206334.1 1230850 R 671143 CDS YP_003206335.1 392374502 13100184 complement(1232070..1232372) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1232372 13100184 DAMO_1444 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206335.1 1232070 R 671143 CDS YP_003206336.1 392374503 13100181 1232321..1235263 1 NC_013260.1 DEAD/DEAH box helicase 1235263 13100181 DAMO_1445 Candidatus Methylomirabilis oxyfera DEAD/DEAH box helicase YP_003206336.1 1232321 D 671143 CDS YP_003206337.1 392374504 13100185 1235323..1235946 1 NC_013260.1 phosphatidylethanolamine N-methyltransferase 1235946 pmtA 13100185 pmtA Candidatus Methylomirabilis oxyfera phosphatidylethanolamine N-methyltransferase YP_003206337.1 1235323 D 671143 CDS YP_003206338.1 392374505 13098658 1235939..1236481 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1236481 13098658 DAMO_1447 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206338.1 1235939 D 671143 CDS YP_003206339.1 392374506 13098105 1236608..1237486 1 NC_013260.1 peptidase M28 1237486 13098105 DAMO_1448 Candidatus Methylomirabilis oxyfera peptidase M28 YP_003206339.1 1236608 D 671143 CDS YP_003206340.1 392374507 13098106 complement(1237498..1237731) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1237731 13098106 DAMO_1449 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206340.1 1237498 R 671143 CDS YP_003206341.1 392374508 13098595 1237974..1238288 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1238288 13098595 DAMO_1450 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206341.1 1237974 D 671143 CDS YP_003206342.1 392374509 13098825 1238365..1238892 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1238892 13098825 DAMO_1451 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206342.1 1238365 D 671143 CDS YP_003206343.1 392374510 13098824 1238968..1239585 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1239585 13098824 DAMO_1452 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206343.1 1238968 D 671143 CDS YP_003206344.1 392374511 13098107 complement(1239641..1240009) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1240009 13098107 DAMO_1453 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206344.1 1239641 R 671143 CDS YP_003206345.1 392374512 13098108 complement(1240159..1240680) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1240680 13098108 DAMO_1454 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206345.1 1240159 R 671143 CDS YP_003206346.1 392374513 13098664 1240934..1241569 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 17 kDa surface antigen 1241569 13098664 DAMO_1455 Candidatus Methylomirabilis oxyfera 17 kDa surface antigen YP_003206346.1 1240934 D 671143 CDS YP_003206347.1 392374514 13098109 1241735..1243144 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1243144 13098109 DAMO_1456 Candidatus Methylomirabilis oxyfera membrane protein YP_003206347.1 1241735 D 671143 CDS YP_003206348.1 392374515 13098110 1243074..1243292 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1243292 13098110 DAMO_1457 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206348.1 1243074 D 671143 CDS YP_003206349.1 392374516 13098111 1243338..1244507 1 NC_013260.1 peptidase M20 domain-containing protein 2 (Aminoacylase 1-like protein 2) 1244507 Pm20d 13098111 Pm20d Candidatus Methylomirabilis oxyfera peptidase M20 domain-containing protein 2 (Aminoacylase 1-like protein 2) YP_003206349.1 1243338 D 671143 CDS YP_003206350.1 392374517 13098112 1244551..1245240 1 NC_013260.1 glycosyl transferase family 2 1245240 13098112 DAMO_1459 Candidatus Methylomirabilis oxyfera glycosyl transferase family 2 YP_003206350.1 1244551 D 671143 CDS YP_003206351.1 392374518 13098113 1245113..1245319 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1245319 13098113 DAMO_1460 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206351.1 1245113 D 671143 CDS YP_003206352.1 392374519 13098114 1245313..1246506 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15901686, 16452451; Product type e : enzyme; anhydro-N-acetylmuramic acid kinase 1246506 anmK 13098114 anmK Candidatus Methylomirabilis oxyfera anhydro-N-acetylmuramic acid kinase YP_003206352.1 1245313 D 671143 CDS YP_003206353.1 392374520 13098115 1246503..1247240 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1247240 13098115 DAMO_1462 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206353.1 1246503 D 671143 CDS YP_003206354.1 392374521 13098116 1247323..1248924 1 NC_013260.1 D-aminoacylase 1248924 dan 13098116 dan Candidatus Methylomirabilis oxyfera D-aminoacylase YP_003206354.1 1247323 D 671143 CDS YP_003206355.1 392374522 13098117 1249003..1249722 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; glutamine amidotransferase-like protein yvdE 1249722 yvdE 13098117 yvdE Candidatus Methylomirabilis oxyfera glutamine amidotransferase-like protein yvdE YP_003206355.1 1249003 D 671143 CDS YP_003206356.1 392374523 13098118 complement(1249754..1250398) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1250398 13098118 DAMO_1465 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206356.1 1249754 R 671143 CDS YP_003206357.1 392374524 13098119 complement(1250407..1251471) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 1251471 13098119 DAMO_1466 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206357.1 1250407 R 671143 CDS YP_003206358.1 392374525 13098659 complement(1251468..1252202) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1252202 13098659 DAMO_1467 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206358.1 1251468 R 671143 CDS YP_003206359.1 392374526 13098120 complement(1252250..1252954) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; SAM dependent methyltransferase 1252954 13098120 DAMO_1468 Candidatus Methylomirabilis oxyfera SAM dependent methyltransferase YP_003206359.1 1252250 R 671143 CDS YP_003206360.1 392374527 13098121 1252867..1253505 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1253505 13098121 DAMO_1469 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206360.1 1252867 D 671143 CDS YP_003206361.1 392374528 13099902 complement(1252993..1253622) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1253622 13099902 DAMO_1470 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206361.1 1252993 R 671143 CDS YP_003206362.1 392374529 13098122 complement(1253672..1254259) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1254259 13098122 DAMO_1471 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206362.1 1253672 R 671143 CDS YP_003206363.1 392374530 13100073 complement(1254225..1254962) 1 NC_013260.1 DNA repair protein RadC-like protein 1254962 radC 13100073 radC Candidatus Methylomirabilis oxyfera DNA repair protein RadC-like protein YP_003206363.1 1254225 R 671143 CDS YP_003206364.1 392374531 13098913 complement(1255038..1256273) 1 NC_013260.1 Natural resistance-associated macrophage protein 1256273 13098913 DAMO_1473 Candidatus Methylomirabilis oxyfera Natural resistance-associated macrophage protein YP_003206364.1 1255038 R 671143 CDS YP_003206365.1 392374532 13098123 complement(1256298..1257527) 1 NC_013260.1 CBS:MgtE intracellular region 1257527 13098123 DAMO_1474 Candidatus Methylomirabilis oxyfera CBS:MgtE intracellular region YP_003206365.1 1256298 R 671143 CDS YP_003206366.1 392374533 13098124 complement(1257714..1258337) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1258337 13098124 DAMO_1475 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206366.1 1257714 R 671143 CDS YP_003206367.1 392374534 13098125 complement(1258696..1258986) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1258986 13098125 DAMO_1476 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206367.1 1258696 R 671143 CDS YP_003206368.1 392374535 13098126 complement(1259100..1259303) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1259303 13098126 DAMO_1477 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206368.1 1259100 R 671143 CDS YP_003206369.1 392374536 13098127 complement(1259440..1259679) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1259679 13098127 DAMO_1478 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206369.1 1259440 R 671143 CDS YP_003206370.1 392374537 13098128 complement(1259786..1260028) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1260028 13098128 DAMO_1479 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206370.1 1259786 R 671143 CDS YP_003206371.1 392374538 13098129 complement(1260183..1260440) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1260440 13098129 DAMO_1480 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206371.1 1260183 R 671143 CDS YP_003206372.1 392374539 13098712 complement(1260433..1260690) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1260690 13098712 DAMO_1481 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206372.1 1260433 R 671143 CDS YP_003206373.1 392374540 13098130 complement(1260942..1261082) 1 NC_013260.1 hypothetical protein 1261082 13098130 DAMO_1482 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206373.1 1260942 R 671143 CDS YP_003206374.1 392374541 13098131 complement(1261229..1261318) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1261318 13098131 DAMO_1483 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206374.1 1261229 R 671143 CDS YP_003206375.1 392374542 13098132 complement(1261354..1261659) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1261659 13098132 DAMO_1484 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206375.1 1261354 R 671143 CDS YP_003206376.1 392374543 13098133 1261576..1261845 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1261845 13098133 DAMO_1485 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206376.1 1261576 D 671143 CDS YP_003206377.1 392374544 13098134 complement(1261672..1261785) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1261785 13098134 DAMO_1486 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206377.1 1261672 R 671143 CDS YP_003206378.1 392374545 13098135 complement(1261842..1261985) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1261985 13098135 DAMO_1487 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206378.1 1261842 R 671143 CDS YP_003206379.1 392374546 13098136 complement(1262061..1262258) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1262258 13098136 DAMO_1488 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206379.1 1262061 R 671143 CDS YP_003206380.1 392374547 13098137 complement(1262251..1262601) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1262601 13098137 DAMO_1489 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206380.1 1262251 R 671143 CDS YP_003206381.1 392374548 13098138 complement(1262556..1262867) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1262867 13098138 DAMO_1490 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206381.1 1262556 R 671143 CDS YP_003206382.1 392374549 13098139 complement(1262875..1263291) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1263291 13098139 DAMO_1491 Candidatus Methylomirabilis oxyfera membrane protein YP_003206382.1 1262875 R 671143 CDS YP_003206383.1 392374550 13098140 complement(1263385..1263633) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1263633 13098140 DAMO_1492 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206383.1 1263385 R 671143 CDS YP_003206384.1 392374551 13098141 complement(1263655..1263891) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1263891 13098141 DAMO_1493 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206384.1 1263655 R 671143 CDS YP_003206385.1 392374552 13098142 complement(1263993..1264949) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1264949 13098142 DAMO_1494 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206385.1 1263993 R 671143 CDS YP_003206386.1 392374553 13098143 1264620..1264808 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1264808 13098143 DAMO_1495 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206386.1 1264620 D 671143 CDS YP_003206387.1 392374554 13098144 complement(1265089..1265706) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1265706 13098144 DAMO_1496 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206387.1 1265089 R 671143 CDS YP_003206388.1 392374555 13098145 1265691..1265954 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1265954 13098145 DAMO_1497 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206388.1 1265691 D 671143 CDS YP_003206389.1 392374556 13098146 complement(1265960..1266130) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1266130 13098146 DAMO_1498 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206389.1 1265960 R 671143 CDS YP_003206390.1 392374557 13098147 complement(1266175..1267560) 1 NC_013260.1 Magnesium transporter 1267560 13098147 DAMO_1499 Candidatus Methylomirabilis oxyfera Magnesium transporter YP_003206390.1 1266175 R 671143 CDS YP_003206391.1 392374558 13098148 complement(1267828..1270146) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11956221; Product type e : enzyme; H+ translocating pyrophosphate synthase (pyrophosphate-energized proton pump) (Pyrophosphate-energized inorganic pyrophosphatase) 1270146 hppA 13098148 hppA Candidatus Methylomirabilis oxyfera H+ translocating pyrophosphate synthase (pyrophosphate-energized proton pump) (Pyrophosphate-energized inorganic pyrophosphatase) YP_003206391.1 1267828 R 671143 CDS YP_003206392.1 392374559 13098149 complement(1270376..1271794) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) 1271794 purF 13098149 purF Candidatus Methylomirabilis oxyfera amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) YP_003206392.1 1270376 R 671143 CDS YP_003206393.1 392374560 13098150 1271820..1272002 1 NC_013260.1 hypothetical protein 1272002 13098150 DAMO_1502 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206393.1 1271820 D 671143 CDS YP_003206394.1 392374561 13098151 complement(1272027..1273193) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; PLP-dependent aminotransferase, putative aspartate aminotransferase 1273193 13098151 DAMO_1503 Candidatus Methylomirabilis oxyfera PLP-dependent aminotransferase, putative aspartate aminotransferase YP_003206394.1 1272027 R 671143 CDS YP_003206395.1 392374562 13098152 complement(1273336..1273887) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1273887 13098152 DAMO_1504 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206395.1 1273336 R 671143 CDS YP_003206396.1 392374563 13098153 complement(1273884..1274144) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1274144 13098153 DAMO_1505 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206396.1 1273884 R 671143 CDS YP_003206397.1 392374564 13098154 1273887..1274159 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1274159 13098154 DAMO_1506 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206397.1 1273887 D 671143 CDS YP_003206398.1 392374565 13098155 1274305..1274436 1 NC_013260.1 hypothetical protein 1274436 13098155 DAMO_1507 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206398.1 1274305 D 671143 CDS YP_003206399.1 392374566 13098156 complement(1274545..1276218) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; arginyl-tRNA synthetase 1276218 argS 13098156 argS Candidatus Methylomirabilis oxyfera arginyl-tRNA synthetase YP_003206399.1 1274545 R 671143 CDS YP_003206401.1 392374568 13098690 complement(1276420..1276758) 1 NC_013260.1 Rhodanese-like 1276758 13098690 DAMO_1510 Candidatus Methylomirabilis oxyfera Rhodanese-like YP_003206401.1 1276420 R 671143 CDS YP_003206402.1 392374569 13098157 complement(1276886..1277956) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Alpha/beta hydrolase fold 1277956 13098157 DAMO_1511 Candidatus Methylomirabilis oxyfera Alpha/beta hydrolase fold YP_003206402.1 1276886 R 671143 CDS YP_003206403.1 392374570 13098158 1278153..1279010 1 NC_013260.1 squalene/phytoene synthase 1279010 13098158 DAMO_1512 Candidatus Methylomirabilis oxyfera squalene/phytoene synthase YP_003206403.1 1278153 D 671143 CDS YP_003206404.1 392374571 13098159 complement(1279137..1279733) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1279733 13098159 DAMO_1513 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206404.1 1279137 R 671143 CDS YP_003206405.1 392374572 13098160 complement(1279752..1280669) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phosphotransferase Gmet_3384 1280669 13098160 DAMO_1514 Candidatus Methylomirabilis oxyfera phosphotransferase Gmet_3384 YP_003206405.1 1279752 R 671143 CDS YP_003206406.1 392374573 13098161 complement(1280680..1281150) 1 NC_013260.1 N-acetylglutamate synthase 1281150 13098161 DAMO_1515 Candidatus Methylomirabilis oxyfera N-acetylglutamate synthase YP_003206406.1 1280680 R 671143 CDS YP_003206407.1 392374574 13098162 complement(1281147..1282262) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; RNA 3'-terminal phosphate cyclase (RNA-3'-phosphate cyclase) (RNA cyclase) 1282262 rtcA 13098162 rtcA Candidatus Methylomirabilis oxyfera RNA 3'-terminal phosphate cyclase (RNA-3'-phosphate cyclase) (RNA cyclase) YP_003206407.1 1281147 R 671143 CDS YP_003206408.1 392374575 13099914 complement(1282156..1282362) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1282362 13099914 DAMO_1517 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206408.1 1282156 R 671143 CDS YP_003206409.1 392374576 13098163 complement(1282596..1283030) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1283030 13098163 DAMO_1518 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206409.1 1282596 R 671143 CDS YP_003206410.1 392374577 13098164 1283311..1285254 1 NC_013260.1 amino acid permease-associated region 1285254 13098164 DAMO_1519 Candidatus Methylomirabilis oxyfera amino acid permease-associated region YP_003206410.1 1283311 D 671143 CDS YP_003206411.1 392374578 13098165 1285288..1285947 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Trk system potassium uptake protein trkA (K(+)-uptake protein trkA) 1285947 13098165 DAMO_1520 Candidatus Methylomirabilis oxyfera Trk system potassium uptake protein trkA (K(+)-uptake protein trkA) YP_003206411.1 1285288 D 671143 CDS YP_003206412.1 392374579 13098166 1285949..1286647 1 NC_013260.1 trkA-N domain-containing protein 1286647 13098166 DAMO_1521 Candidatus Methylomirabilis oxyfera trkA-N domain-containing protein YP_003206412.1 1285949 D 671143 CDS YP_003206413.1 392374580 13098167 complement(1286796..1287572) 1 NC_013260.1 Alpha/beta hydrolase fold 1287572 13098167 DAMO_1522 Candidatus Methylomirabilis oxyfera Alpha/beta hydrolase fold YP_003206413.1 1286796 R 671143 CDS YP_003206414.1 392374581 13098168 complement(1287582..1288622) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15557260; Product type e : enzyme; glycerol-3-phosphate dehydrogenase 1288622 gpsA 13098168 gpsA Candidatus Methylomirabilis oxyfera glycerol-3-phosphate dehydrogenase YP_003206414.1 1287582 R 671143 CDS YP_003206415.1 392374582 13098169 complement(1288594..1289382) 1 NC_013260.1 prolipoprotein diacylglyceryl transferase 1289382 lgt 13098169 lgt Candidatus Methylomirabilis oxyfera prolipoprotein diacylglyceryl transferase YP_003206415.1 1288594 R 671143 CDS YP_003206416.1 392374583 13098795 complement(1289492..1289611) 1 NC_013260.1 hypothetical protein 1289611 13098795 DAMO_1525 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206416.1 1289492 R 671143 CDS YP_003206417.1 392374584 13098170 complement(1289657..1291177) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; aldehyde dehydrogenase 1291177 aldB 13098170 aldB Candidatus Methylomirabilis oxyfera aldehyde dehydrogenase YP_003206417.1 1289657 R 671143 CDS YP_003206418.1 392374585 13098171 complement(1291365..1292294) 1 NC_013260.1 K+-dependent Na+/Ca+ exchanger-like protein 1292294 13098171 DAMO_1527 Candidatus Methylomirabilis oxyfera K+-dependent Na+/Ca+ exchanger-like protein YP_003206418.1 1291365 R 671143 CDS YP_003206419.1 392374586 13098172 complement(1292393..1293742) 1 NC_013260.1 Na(+)/H(+) antiporter nhaA (Sodium/proton antiporter nhaA) 1293742 nhaA 13098172 nhaA Candidatus Methylomirabilis oxyfera Na(+)/H(+) antiporter nhaA (Sodium/proton antiporter nhaA) YP_003206419.1 1292393 R 671143 CDS YP_003206420.1 392374587 13098173 complement(1293825..1294247) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1294247 13098173 DAMO_1529 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206420.1 1293825 R 671143 CDS YP_003206421.1 392374588 13098174 complement(1294274..1294480) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1294480 13098174 DAMO_1530 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206421.1 1294274 R 671143 CDS YP_003206422.1 392374589 13098175 complement(1294718..1295497) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Trehalose-phosphatase (Trehalose 6-phosphate phosphatase) (TPP) 1295497 13098175 DAMO_1531 Candidatus Methylomirabilis oxyfera Trehalose-phosphatase (Trehalose 6-phosphate phosphatase) (TPP) YP_003206422.1 1294718 R 671143 CDS YP_003206423.1 392374590 13098412 complement(1295543..1296211) 1 NC_013260.1 LuxR family two component transcriptional regulator 1296211 13098412 DAMO_1532 Candidatus Methylomirabilis oxyfera LuxR family two component transcriptional regulator YP_003206423.1 1295543 R 671143 CDS YP_003206424.1 392374591 13098505 complement(1296195..1297628) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Multi-sensor signal transduction histidine kinase 1297628 13098505 DAMO_1533 Candidatus Methylomirabilis oxyfera Multi-sensor signal transduction histidine kinase YP_003206424.1 1296195 R 671143 CDS YP_003206425.1 392374592 13098176 complement(1297998..1299077) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 3062310; Product type pt : putative transporter; sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein 1299077 13098176 DAMO_1534 Candidatus Methylomirabilis oxyfera sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein YP_003206425.1 1297998 R 671143 CDS YP_003206426.1 392374593 13099899 complement(1299116..1299952) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter permease 1299952 13099899 DAMO_1535 Candidatus Methylomirabilis oxyfera ABC transporter permease YP_003206426.1 1299116 R 671143 CDS YP_003206427.1 392374594 13098177 complement(1299945..1300820) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter permease 1300820 13098177 DAMO_1536 Candidatus Methylomirabilis oxyfera ABC transporter permease YP_003206427.1 1299945 R 671143 CDS YP_003206428.1 392374595 13098598 complement(1300817..1302025) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; sugar ABC transporter periplasmic sugar-binding protein 1302025 13098598 DAMO_1537 Candidatus Methylomirabilis oxyfera sugar ABC transporter periplasmic sugar-binding protein YP_003206428.1 1300817 R 671143 CDS YP_003206429.1 392374596 13098178 complement(1302093..1302800) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1302800 13098178 DAMO_1538 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206429.1 1302093 R 671143 CDS YP_003206430.1 392374597 13098179 complement(1302805..1304058) 1 NC_013260.1 glycosyl transferase 1304058 13098179 DAMO_1539 Candidatus Methylomirabilis oxyfera glycosyl transferase YP_003206430.1 1302805 R 671143 CDS YP_003206431.1 392374598 13098180 complement(1304064..1304906) 1 NC_013260.1 Mannosyl-3-phosphoglycerate phosphatase 1304906 13098180 DAMO_1540 Candidatus Methylomirabilis oxyfera Mannosyl-3-phosphoglycerate phosphatase YP_003206431.1 1304064 R 671143 CDS YP_003206432.1 392374599 13098181 complement(1304890..1306098) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1306098 13098181 DAMO_1541 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206432.1 1304890 R 671143 CDS YP_003206433.1 392374600 13098182 complement(1306124..1306519) 1 NC_013260.1 hypothetical protein 1306519 13098182 DAMO_1542 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206433.1 1306124 R 671143 CDS YP_003206434.1 392374601 13098183 complement(1306584..1307876) 1 NC_013260.1 hydroxypyruvate reductase 1307876 13098183 DAMO_1543 Candidatus Methylomirabilis oxyfera hydroxypyruvate reductase YP_003206434.1 1306584 R 671143 CDS YP_003206435.1 392374602 13098184 complement(1307956..1309398) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Sensor protein 1309398 13098184 DAMO_1544 Candidatus Methylomirabilis oxyfera Sensor protein YP_003206435.1 1307956 R 671143 CDS YP_003206436.1 392374603 13098185 complement(1309570..1310013) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1310013 13098185 DAMO_1545 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206436.1 1309570 R 671143 CDS YP_003206437.1 392374604 13098186 1310228..1310437 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1310437 13098186 DAMO_1546 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206437.1 1310228 D 671143 CDS YP_003206438.1 392374605 13098187 complement(1310533..1312689) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Phosphomannomutase 1312689 13098187 DAMO_1547 Candidatus Methylomirabilis oxyfera Phosphomannomutase YP_003206438.1 1310533 R 671143 CDS YP_003206439.1 392374606 13098188 complement(1312715..1312990) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1312990 13098188 DAMO_1548 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206439.1 1312715 R 671143 CDS YP_003206440.1 392374607 13098190 complement(1312950..1313450) 1 NC_013260.1 transcription elongation factor greA (Transcript cleavage factor greA) 1313450 greA 13098190 greA Candidatus Methylomirabilis oxyfera transcription elongation factor greA (Transcript cleavage factor greA) YP_003206440.1 1312950 R 671143 CDS YP_003206441.1 392374608 13098191 complement(1313447..1314847) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10546897, 9372179, 9426192; Product type e : enzyme; glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) 1314847 gltX 13098191 gltX Candidatus Methylomirabilis oxyfera glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) YP_003206441.1 1313447 R 671143 CDS YP_003206442.1 392374609 13098192 complement(1314904..1315083) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1315083 13098192 DAMO_1551 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206442.1 1314904 R 671143 CDS YP_003206443.1 392374610 13098193 complement(1315355..1315834) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Ribosomal-protein-alanine acetyltransferase, RimI-like protein 1315834 13098193 DAMO_1552 Candidatus Methylomirabilis oxyfera Ribosomal-protein-alanine acetyltransferase, RimI-like protein YP_003206443.1 1315355 R 671143 CDS YP_003206444.1 392374611 13098194 complement(1315857..1316561) 1 NC_013260.1 peptidase M22, glycoprotease 1316561 13098194 DAMO_1553 Candidatus Methylomirabilis oxyfera peptidase M22, glycoprotease YP_003206444.1 1315857 R 671143 CDS YP_003206445.1 392374612 13098195 complement(1316614..1317873) 1 NC_013260.1 Major facilitator superfamily MFS_1 1317873 13098195 DAMO_1554 Candidatus Methylomirabilis oxyfera Major facilitator superfamily MFS_1 YP_003206445.1 1316614 R 671143 CDS YP_003206446.1 392374613 13098196 complement(1317870..1318376) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1318376 13098196 DAMO_1555 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206446.1 1317870 R 671143 CDS YP_003206447.1 392374614 13098197 complement(1318470..1320065) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; carbohydrate kinase 1320065 yjeF 13098197 yjeF Candidatus Methylomirabilis oxyfera carbohydrate kinase YP_003206447.1 1318470 R 671143 CDS YP_003206448.1 392374615 13099871 complement(1320090..1320473) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7559576; Product type e : enzyme; acyl carrier protein synthase (ACP-CoA phosphopantetheinyltransferase)(Holo-ACP synthase) (holo-[acyl-carrier-protein] synthase (CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase)) 1320473 acpS 13099871 acpS Candidatus Methylomirabilis oxyfera acyl carrier protein synthase (ACP-CoA phosphopantetheinyltransferase)(Holo-ACP synthase) (holo-[acyl-carrier-protein] synthase (CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase)) YP_003206448.1 1320090 R 671143 CDS YP_003206449.1 392374616 13098413 complement(1320531..1321259) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10944349; Product type e : enzyme; pyridoxal phosphate biosynthetic protein PdxJ (PNP synthase) 1321259 pdxJ 13098413 pdxJ Candidatus Methylomirabilis oxyfera pyridoxal phosphate biosynthetic protein PdxJ (PNP synthase) YP_003206449.1 1320531 R 671143 CDS YP_003206450.1 392374617 13098404 complement(1321310..1321462) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1321462 13098404 DAMO_1559 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206450.1 1321310 R 671143 CDS YP_003206451.1 392374618 13098198 complement(1321506..1322855) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10671448, 8550580, 9286983; Product type e : enzyme; phosphoglucosamine mutase 1322855 glmM 13098198 glmM Candidatus Methylomirabilis oxyfera phosphoglucosamine mutase YP_003206451.1 1321506 R 671143 CDS YP_003206452.1 392374619 13098199 complement(1322900..1323562) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1323562 13098199 DAMO_1561 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206452.1 1322900 R 671143 CDS YP_003206453.1 392374620 13098200 complement(1323528..1323617) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1323617 13098200 DAMO_1562 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206453.1 1323528 R 671143 CDS YP_003206454.1 392374621 13098201 complement(1323638..1324456) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1324456 13098201 DAMO_1563 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206454.1 1323638 R 671143 CDS YP_003206455.1 392374622 13098202 complement(1324462..1325313) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase) 1325313 folP 13098202 folP Candidatus Methylomirabilis oxyfera dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase) YP_003206455.1 1324462 R 671143 CDS YP_003206456.1 392374623 13098906 complement(1325440..1327251) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12037319, 7674922; Product type e : enzyme; cell division protein FtsH; ATP-dependent zinc-metallo protease 1327251 ftsH 13098906 ftsH Candidatus Methylomirabilis oxyfera cell division protein FtsH; ATP-dependent zinc-metallo protease YP_003206456.1 1325440 R 671143 CDS YP_003206457.1 392374624 13099890 complement(1327648..1329054) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; ATPase; tRNA(Ile)-lysidine synthase 1329054 13099890 DAMO_1566 Candidatus Methylomirabilis oxyfera ATPase; tRNA(Ile)-lysidine synthase YP_003206457.1 1327648 R 671143 CDS YP_003206458.1 392374625 13098642 complement(1329233..1329409) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1329409 13098642 DAMO_1567 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206458.1 1329233 R 671143 CDS YP_003206459.1 392374626 13098203 1329350..1329571 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1329571 13098203 DAMO_1568 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206459.1 1329350 D 671143 CDS YP_003206460.1 392374627 13100250 1329640..1330410 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1330410 13100250 DAMO_1569 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206460.1 1329640 D 671143 CDS YP_003206461.1 392374628 13098204 complement(1330428..1331108) 1 NC_013260.1 Calcineurin-like phosphoesterase 1331108 13098204 DAMO_1570 Candidatus Methylomirabilis oxyfera Calcineurin-like phosphoesterase YP_003206461.1 1330428 R 671143 CDS YP_003206462.1 392374629 13098205 complement(1331252..1331497) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1331497 13098205 DAMO_1571 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206462.1 1331252 R 671143 CDS YP_003206463.1 392374630 13098206 complement(1331598..1332374) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1332374 13098206 DAMO_1572 Candidatus Methylomirabilis oxyfera membrane protein YP_003206463.1 1331598 R 671143 CDS YP_003206464.1 392374631 13100220 complement(1332374..1333525) 1 NC_013260.1 Xaa-Pro aminopeptidase 1333525 13100220 DAMO_1573 Candidatus Methylomirabilis oxyfera Xaa-Pro aminopeptidase YP_003206464.1 1332374 R 671143 CDS YP_003206465.1 392374632 13100225 complement(1333539..1333811) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1333811 13100225 DAMO_1574 Candidatus Methylomirabilis oxyfera membrane protein YP_003206465.1 1333539 R 671143 CDS YP_003206466.1 392374633 13098207 complement(1333846..1335174) 1 NC_013260.1 thiamine biosynthesis protein thiC 1335174 thiC 13098207 thiC Candidatus Methylomirabilis oxyfera thiamine biosynthesis protein thiC YP_003206466.1 1333846 R 671143 CDS YP_003206467.1 392374634 13098208 complement(1335216..1336619) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1336619 13098208 DAMO_1576 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206467.1 1335216 R 671143 CDS YP_003206468.1 392374635 13098209 complement(1336716..1338158) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1338158 13098209 DAMO_1577 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206468.1 1336716 R 671143 CDS YP_003206469.1 392374636 13098210 complement(1338177..1339250) 1 NC_013260.1 thiamine biosynthesis protein ThiH 1339250 ThiH 13098210 ThiH Candidatus Methylomirabilis oxyfera thiamine biosynthesis protein ThiH YP_003206469.1 1338177 R 671143 CDS YP_003206470.1 392374637 13098211 complement(1339343..1339663) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1339663 13098211 DAMO_1579 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206470.1 1339343 R 671143 CDS YP_003206471.1 392374638 13098212 complement(1339647..1339874) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1339874 13098212 DAMO_1580 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206471.1 1339647 R 671143 CDS YP_003206472.1 392374639 13098213 complement(1340208..1340567) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1340567 13098213 DAMO_1581 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206472.1 1340208 R 671143 CDS YP_003206473.1 392374640 13098214 1340229..1340516 1 NC_013260.1 transcriptional regulator, XRE family protein 1340516 13098214 DAMO_1582 Candidatus Methylomirabilis oxyfera transcriptional regulator, XRE family protein YP_003206473.1 1340229 D 671143 CDS YP_003206475.1 392374642 13098838 complement(1340949..1342085) 1 NC_013260.1 radical SAM protein 1342085 13098838 DAMO_1584 Candidatus Methylomirabilis oxyfera radical SAM protein YP_003206475.1 1340949 R 671143 CDS YP_003206476.1 392374643 13098216 complement(1342082..1342411) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1342411 13098216 DAMO_1585 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206476.1 1342082 R 671143 CDS YP_003206477.1 392374644 13098217 complement(1342473..1342961) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7715601, 7715602; Product type f : factor; cytochrome c-type biogenesis protein cycL 1342961 cycL 13098217 cycL Candidatus Methylomirabilis oxyfera cytochrome c-type biogenesis protein cycL YP_003206477.1 1342473 R 671143 CDS YP_003206478.1 392374645 13098842 complement(1343005..1343523) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 11256948, 11843181, 9537397; Product type e : enzyme; periplasmic thioredoxin (cytochrome c biogenesis) 1343523 ccmG 13098842 ccmG Candidatus Methylomirabilis oxyfera periplasmic thioredoxin (cytochrome c biogenesis) YP_003206478.1 1343005 R 671143 CDS YP_003206479.1 392374646 13098218 complement(1343502..1345502) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7715601, 7715602; Product type f : factor; cytochrome c-type biogenesis protein cycK 1345502 cycK 13098218 cycK Candidatus Methylomirabilis oxyfera cytochrome c-type biogenesis protein cycK YP_003206479.1 1343502 R 671143 CDS YP_003206480.1 392374647 13098219 complement(1345502..1345951) 1 NC_013260.1 cytochrome c-type biogenesis protein CcmE 1345951 ccmE 13098219 ccmE Candidatus Methylomirabilis oxyfera cytochrome c-type biogenesis protein CcmE YP_003206480.1 1345502 R 671143 CDS YP_003206481.1 392374648 13098220 complement(1346091..1346789) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 7635817; Product type pt : putative transporter; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis) 1346789 ccmC 13098220 ccmC Candidatus Methylomirabilis oxyfera heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis) YP_003206481.1 1346091 R 671143 CDS YP_003206482.1 392374649 13098221 complement(1346795..1347484) 1 NC_013260.1 Heme exporter, protein B 1347484 13098221 DAMO_1591 Candidatus Methylomirabilis oxyfera Heme exporter, protein B YP_003206482.1 1346795 R 671143 CDS YP_003206483.1 392374650 13098222 complement(1347469..1348224) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1348224 13098222 DAMO_1592 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206483.1 1347469 R 671143 CDS YP_003206484.1 392374651 13098223 complement(1348415..1349425) 1 NC_013260.1 hypothetical protein 1349425 13098223 DAMO_1593 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206484.1 1348415 R 671143 CDS YP_003206485.1 392374652 13098224 complement(1349422..1350153) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12591875; Product type e : enzyme; lipoate biosynthesis protein B; Lipoate-protein ligase B 1350153 lipB 13098224 lipB Candidatus Methylomirabilis oxyfera lipoate biosynthesis protein B; Lipoate-protein ligase B YP_003206485.1 1349422 R 671143 CDS YP_003206486.1 392374653 13100065 complement(1350340..1351746) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 10796014, 9515924; Product type e : enzyme; dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) 1351746 lpD 13100065 lpD Candidatus Methylomirabilis oxyfera dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) YP_003206486.1 1350340 R 671143 CDS YP_003206487.1 392374654 13100037 complement(1351749..1352996) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10796014, 9515924; Product type e : enzyme; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) 1352996 pdhC 13100037 pdhC Candidatus Methylomirabilis oxyfera dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) YP_003206487.1 1351749 R 671143 CDS YP_003206488.1 392374655 13100064 complement(1353140..1354117) 1 NC_013260.1 Pyruvate dehydrogenase E1 component subunit beta 1354117 pdhB 13100064 pdhB Candidatus Methylomirabilis oxyfera Pyruvate dehydrogenase E1 component subunit beta YP_003206488.1 1353140 R 671143 CDS YP_003206489.1 392374656 13100036 complement(1354134..1355105) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10796014, 9515924; Product type e : enzyme; Pyruvate dehydrogenase E1 component subunit alpha 1355105 pdhA 13100036 pdhA Candidatus Methylomirabilis oxyfera Pyruvate dehydrogenase E1 component subunit alpha YP_003206489.1 1354134 R 671143 CDS YP_003206490.1 392374657 13100035 complement(1355129..1356067) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8444795, 9141657; Product type e : enzyme; Lipoyl synthase (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) 1356067 lipA 13100035 lipA Candidatus Methylomirabilis oxyfera Lipoyl synthase (Lipoyl-acyl-carrier protein synthase) (Sulfur insertion protein lipA) (Lip-syn) YP_003206490.1 1355129 R 671143 CDS YP_003206491.1 392374658 13098225 complement(1356172..1357041) 1 NC_013260.1 phP-like protein 1357041 13098225 DAMO_1600 Candidatus Methylomirabilis oxyfera phP-like protein YP_003206491.1 1356172 R 671143 CDS YP_003206492.1 392374659 13098226 complement(1357053..1357862) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; formate dehydrogenase family accessory protein (FdhD) 1357862 13098226 DAMO_1601 Candidatus Methylomirabilis oxyfera formate dehydrogenase family accessory protein (FdhD) YP_003206492.1 1357053 R 671143 CDS YP_003206493.1 392374660 13098227 complement(1357864..1358613) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1358613 13098227 DAMO_1602 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206493.1 1357864 R 671143 CDS YP_003206494.1 392374661 13098508 complement(1358643..1359080) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1359080 13098508 DAMO_1603 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206494.1 1358643 R 671143 CDS YP_003206495.1 392374662 13098516 complement(1359235..1359696) 1 NC_013260.1 NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) (NDH-1 subunit I) 1359696 nuoI 13098516 nuoI Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) (NDH-1 subunit I) YP_003206495.1 1359235 R 671143 CDS YP_003206496.1 392374663 13098640 complement(1359731..1360276) 1 NC_013260.1 NADH-quinone oxidoreductase subunit 6 (NADH dehydrogenase I chain 6) (NDH-1 subunit 6) 1360276 nqo 13098640 nqo Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit 6 (NADH dehydrogenase I chain 6) (NDH-1 subunit 6) YP_003206496.1 1359731 R 671143 CDS YP_003206497.1 392374664 13098639 complement(1360305..1360607) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 14705938; Product type f : factor; iron-binding protein IscA (iron-sulfur cluster assembly protein) 1360607 iscA 13098639 iscA Candidatus Methylomirabilis oxyfera iron-binding protein IscA (iron-sulfur cluster assembly protein) YP_003206497.1 1360305 R 671143 CDS YP_003206498.1 392374665 13098638 complement(1360667..1361893) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8464885; Product type e : enzyme; cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) 1361893 nifS 13098638 nifS Candidatus Methylomirabilis oxyfera cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) YP_003206498.1 1360667 R 671143 CDS YP_003206499.1 392374666 13098507 complement(1362082..1363128) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1363128 13098507 DAMO_1608 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206499.1 1362082 R 671143 CDS YP_003206500.1 392374667 13098228 complement(1363308..1364510) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1364510 13098228 DAMO_1609 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206500.1 1363308 R 671143 CDS YP_003206501.1 392374668 13098229 complement(1364520..1365722) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) 1365722 apgM 13098229 apgM Candidatus Methylomirabilis oxyfera 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) YP_003206501.1 1364520 R 671143 CDS YP_003206502.1 392374669 13098230 complement(1365784..1366995) 1 NC_013260.1 molybdenum cofactor biosynthesis protein MoeA 1366995 13098230 DAMO_1611 Candidatus Methylomirabilis oxyfera molybdenum cofactor biosynthesis protein MoeA YP_003206502.1 1365784 R 671143 CDS YP_003206503.1 392374670 13098231 complement(1367203..1368132) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10049365, 15890030; Product type e : enzyme; thioredoxin reductase, FAD/NAD(P)-binding 1368132 trxB 13098231 trxB Candidatus Methylomirabilis oxyfera thioredoxin reductase, FAD/NAD(P)-binding YP_003206503.1 1367203 R 671143 CDS YP_003206504.1 392374671 13098614 complement(1368134..1368664) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 4Fe-4S ferredoxin iron-sulfur binding domain protein 1368664 13098614 DAMO_1613 Candidatus Methylomirabilis oxyfera 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003206504.1 1368134 R 671143 CDS YP_003206505.1 392374672 13098603 complement(1368676..1369203) 1 NC_013260.1 NADH-ubiquinone oxidoreductase 20 kDa subunit (NADH dehydrogenase subunit 10) 1369203 NAD 13098603 NAD Candidatus Methylomirabilis oxyfera NADH-ubiquinone oxidoreductase 20 kDa subunit (NADH dehydrogenase subunit 10) YP_003206505.1 1368676 R 671143 CDS YP_003206506.1 392374673 13098474 1369106..1369276 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1369276 13098474 DAMO_1615 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206506.1 1369106 D 671143 CDS YP_003206507.1 392374674 13098599 complement(1369309..1370943) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Molybdopterin oxidoreductase Fe4S4 region 1370943 13098599 DAMO_1616 Candidatus Methylomirabilis oxyfera Molybdopterin oxidoreductase Fe4S4 region YP_003206507.1 1369309 R 671143 CDS YP_003206508.1 392374675 13098232 1371297..1371608 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1371608 13098232 DAMO_1617 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206508.1 1371297 D 671143 CDS YP_003206509.1 392374676 13098233 1371592..1371822 1 NC_013260.1 hypothetical protein 1371822 13098233 DAMO_1618 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206509.1 1371592 D 671143 CDS YP_003206510.1 392374677 13099904 1371860..1373770 1 NC_013260.1 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1373770 korA 13099904 korA Candidatus Methylomirabilis oxyfera 2-oxoglutarate ferredoxin oxidoreductase subunit alpha YP_003206510.1 1371860 D 671143 CDS YP_003206511.1 392374678 13098234 1373773..1374798 1 NC_013260.1 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1374798 13098234 DAMO_1620 Candidatus Methylomirabilis oxyfera 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_003206511.1 1373773 D 671143 CDS YP_003206512.1 392374679 13098870 1374892..1375674 1 NC_013260.1 thymidylate synthase complementing protein ThyX 1375674 13098870 DAMO_1621 Candidatus Methylomirabilis oxyfera thymidylate synthase complementing protein ThyX YP_003206512.1 1374892 D 671143 CDS YP_003206513.1 392374680 13098235 complement(1375763..1376191) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1376191 13098235 DAMO_1622 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206513.1 1375763 R 671143 CDS YP_003206514.1 392374681 13098583 complement(1376305..1376424) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1376424 13098583 DAMO_1623 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206514.1 1376305 R 671143 CDS YP_003206515.1 392374682 13098236 complement(1376342..1376854) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1376854 13098236 DAMO_1624 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206515.1 1376342 R 671143 CDS YP_003206516.1 392374683 13098237 1376648..1378369 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1378369 13098237 DAMO_1627 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206516.1 1376648 D 671143 CDS YP_003206517.1 392374684 13098238 1378713..1379381 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; phosphoribosylglycinamide formyltransferase (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) 1379381 purN 13098238 purN Candidatus Methylomirabilis oxyfera phosphoribosylglycinamide formyltransferase (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) YP_003206517.1 1378713 D 671143 CDS YP_003206518.1 392374685 13098239 1379378..1380982 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2192230, 2687276; Product type e : enzyme; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1380982 purH 13098239 purH Candidatus Methylomirabilis oxyfera bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_003206518.1 1379378 D 671143 CDS YP_003206519.1 392374686 13098494 1381077..1382354 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; phosphoribosylamine--glycine ligase (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) 1382354 purD 13098494 purD Candidatus Methylomirabilis oxyfera phosphoribosylamine--glycine ligase (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) YP_003206519.1 1381077 D 671143 CDS YP_003206520.1 392374687 13098240 1382414..1382938 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; phosphoribosylaminoimidazole carboxylase catalytic subunit (AIR carboxylase) (AIRC) 1382938 purE 13098240 purE Candidatus Methylomirabilis oxyfera phosphoribosylaminoimidazole carboxylase catalytic subunit (AIR carboxylase) (AIRC) YP_003206520.1 1382414 D 671143 CDS YP_003206521.1 392374688 13098241 1383012..1383776 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1383776 13098241 DAMO_1632 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206521.1 1383012 D 671143 CDS YP_003206522.1 392374689 13098242 1383779..1384534 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1384534 13098242 DAMO_1633 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206522.1 1383779 D 671143 CDS YP_003206523.1 392374690 13098243 1384535..1385560 1 NC_013260.1 glycosyl transferase 1385560 13098243 DAMO_1634 Candidatus Methylomirabilis oxyfera glycosyl transferase YP_003206523.1 1384535 D 671143 CDS YP_003206524.1 392374691 13098244 1385544..1386518 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1386518 13098244 DAMO_1635 Candidatus Methylomirabilis oxyfera membrane protein YP_003206524.1 1385544 D 671143 CDS YP_003206525.1 392374692 13098245 1386649..1387260 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Membrane-associated phospholipid phosphatase 1387260 13098245 DAMO_1636 Candidatus Methylomirabilis oxyfera Membrane-associated phospholipid phosphatase YP_003206525.1 1386649 D 671143 CDS YP_003206526.1 392374693 13098694 1387406..1388329 1 NC_013260.1 Selenide, water dikinase (Selenophosphate synthetase) (Selenium donor protein) 1388329 selD 13098694 selD Candidatus Methylomirabilis oxyfera Selenide, water dikinase (Selenophosphate synthetase) (Selenium donor protein) YP_003206526.1 1387406 D 671143 CDS YP_003206527.1 392374694 13098691 complement(1388442..1389116) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1389116 13098691 DAMO_1638 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206527.1 1388442 R 671143 CDS YP_003206528.1 392374695 13098688 complement(1389330..1390133) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1390133 13098688 DAMO_1639 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206528.1 1389330 R 671143 CDS YP_003206529.1 392374696 13098689 complement(1390176..1391294) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1624462, 20507564, 8478319, 92250420, 9446588; Product type e : enzyme; ADP-heptose--LPS heptosyltransferase 1391294 waaC 13098689 waaC Candidatus Methylomirabilis oxyfera ADP-heptose--LPS heptosyltransferase YP_003206529.1 1390176 R 671143 CDS YP_003206530.1 392374697 13098246 complement(1391291..1392943) 1 NC_013260.1 ADP-heptose--LPS heptosyltransferase II 1392943 13098246 DAMO_1641 Candidatus Methylomirabilis oxyfera ADP-heptose--LPS heptosyltransferase II YP_003206530.1 1391291 R 671143 CDS YP_003206531.1 392374698 13098247 complement(1392940..1393905) 1 NC_013260.1 Lipid A biosynthesis acyltransferase 1393905 13098247 DAMO_1642 Candidatus Methylomirabilis oxyfera Lipid A biosynthesis acyltransferase YP_003206531.1 1392940 R 671143 CDS YP_003206532.1 392374699 13098248 complement(1393902..1395026) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) 1395026 lpxK 13098248 lpxK Candidatus Methylomirabilis oxyfera Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) YP_003206532.1 1393902 R 671143 CDS YP_003206533.1 392374700 13098249 complement(1395023..1396309) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2033061; Product type e : enzyme; 3-deoxy-D-manno-octulosonic-acid transferase 1396309 kdtA 13098249 kdtA Candidatus Methylomirabilis oxyfera 3-deoxy-D-manno-octulosonic-acid transferase YP_003206533.1 1395023 R 671143 CDS YP_003206534.1 392374701 13098250 complement(1396326..1397021) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1397021 13098250 DAMO_1645 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206534.1 1396326 R 671143 CDS YP_003206535.1 392374702 13098811 complement(1397021..1398193) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3277952, 3531165; Product type e : enzyme; Lipid-A-disaccharide synthase 1398193 lpxB 13098811 lpxB Candidatus Methylomirabilis oxyfera Lipid-A-disaccharide synthase YP_003206535.1 1397021 R 671143 CDS YP_003206536.1 392374703 13098251 complement(1398200..1399147) 1 NC_013260.1 dehydrogenase 1399147 13098251 DAMO_1647 Candidatus Methylomirabilis oxyfera dehydrogenase YP_003206536.1 1398200 R 671143 CDS YP_003206537.1 392374704 13098252 complement(1399226..1400026) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1400026 13098252 DAMO_1648 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206537.1 1399226 R 671143 CDS YP_003206538.1 392374705 13098884 complement(1400115..1400891) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14651342, 9197543, 9440522; Product type e : enzyme; acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acyltransferase) 1400891 lpxA 13098884 lpxA Candidatus Methylomirabilis oxyfera acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase (UDP-N-acetylglucosamine acyltransferase) YP_003206538.1 1400115 R 671143 CDS YP_003206539.1 392374706 13098253 complement(1400891..1401370) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15194690, 15967411, 8910376, 9197543; Product type e : enzyme; (3R)-hydroxymyristoyl-ACP dehydratase 1401370 fabZ 13098253 fabZ Candidatus Methylomirabilis oxyfera (3R)-hydroxymyristoyl-ACP dehydratase YP_003206539.1 1400891 R 671143 CDS YP_003206540.1 392374707 13098254 complement(1401367..1402446) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8293817, 8586272, 9197543; Product type e : enzyme; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase 1402446 lpxD 13098254 lpxD Candidatus Methylomirabilis oxyfera UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase YP_003206540.1 1401367 R 671143 CDS YP_003206541.1 392374708 13098522 complement(1402455..1403003) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Outer membrane chaperone Skp (OmpH) 1403003 13098522 DAMO_1652 Candidatus Methylomirabilis oxyfera Outer membrane chaperone Skp (OmpH) YP_003206541.1 1402455 R 671143 CDS YP_003206542.1 392374709 13098492 complement(1403023..1405326) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Surface antigen (D15) 1405326 13098492 DAMO_1653 Candidatus Methylomirabilis oxyfera Surface antigen (D15) YP_003206542.1 1403023 R 671143 CDS YP_003206543.1 392374710 13098255 complement(1405474..1407906) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12054807, 12220194; Product type f : factor; chaperone 1407906 clpB 13098255 clpB Candidatus Methylomirabilis oxyfera chaperone YP_003206543.1 1405474 R 671143 CDS YP_003206544.1 392374711 13098519 complement(1407976..1408656) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10783239, 11844772; Product type t : transporter; lipoprotein-releasing system ABC transporter ATP-binding protein lolD 1408656 lolD 13098519 lolD Candidatus Methylomirabilis oxyfera lipoprotein-releasing system ABC transporter ATP-binding protein lolD YP_003206544.1 1407976 R 671143 CDS YP_003206545.1 392374712 13098256 complement(1408649..1409899) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10783239, 11844772; Product type t : transporter; Lipoprotein releasing system, transmembrane protein, LolC/E family 1409899 lolC 13098256 lolC Candidatus Methylomirabilis oxyfera Lipoprotein releasing system, transmembrane protein, LolC/E family YP_003206545.1 1408649 R 671143 CDS YP_003206546.1 392374713 13098257 complement(1409889..1411391) 1 NC_013260.1 Lysyl-tRNA synthetase (LysRS) 1411391 lysS 13098257 lysS Candidatus Methylomirabilis oxyfera Lysyl-tRNA synthetase (LysRS) YP_003206546.1 1409889 R 671143 CDS YP_003206547.1 392374714 13098518 complement(1411500..1411997) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1411997 13098518 DAMO_1658 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206547.1 1411500 R 671143 CDS YP_003206548.1 392374715 13100186 complement(1412058..1412963) 1 NC_013260.1 protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) 1412963 ctaB 13100186 ctaB Candidatus Methylomirabilis oxyfera protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) YP_003206548.1 1412058 R 671143 CDS YP_003206549.1 392374716 13098521 complement(1412960..1413937) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Cytochrome oxidase assembly 1413937 13098521 DAMO_1660 Candidatus Methylomirabilis oxyfera Cytochrome oxidase assembly YP_003206549.1 1412960 R 671143 CDS YP_003206550.1 392374717 13098258 1414177..1415211 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8591033, 9202457; Product type pe : putative enzyme; di-heme cytochrome c peroxidase 1415211 13098258 DAMO_1661 Candidatus Methylomirabilis oxyfera di-heme cytochrome c peroxidase YP_003206550.1 1414177 D 671143 CDS YP_003206551.1 392374718 13098259 1415417..1416142 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein 1416142 13098259 DAMO_1662 Candidatus Methylomirabilis oxyfera lipoprotein YP_003206551.1 1415417 D 671143 CDS YP_003206552.1 392374719 13100047 1416247..1417419 1 NC_013260.1 metallophosphoesterase 1417419 13100047 DAMO_1663 Candidatus Methylomirabilis oxyfera metallophosphoesterase YP_003206552.1 1416247 D 671143 CDS YP_003206553.1 392374720 13098514 1417456..1417920 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1417920 13098514 DAMO_1664 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206553.1 1417456 D 671143 CDS YP_003206554.1 392374721 13098513 1417951..1418826 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1418826 13098513 DAMO_1665 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206554.1 1417951 D 671143 CDS YP_003206555.1 392374722 13098526 1418904..1419929 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8591033, 9202457; Product type pe : putative enzyme; di-heme cytochrome c peroxidase 1419929 13098526 DAMO_1666 Candidatus Methylomirabilis oxyfera di-heme cytochrome c peroxidase YP_003206555.1 1418904 D 671143 CDS YP_003206556.1 392374723 13098260 complement(1420015..1422672) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 9168612; Product type e : enzyme; pyruvate phosphate dikinase 1422672 ppdK 13098260 ppdK Candidatus Methylomirabilis oxyfera pyruvate phosphate dikinase YP_003206556.1 1420015 R 671143 CDS YP_003206557.1 392374724 13100061 complement(1422889..1423614) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1423614 13100061 DAMO_1668 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206557.1 1422889 R 671143 CDS YP_003206558.1 392374725 13098261 complement(1423685..1426255) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; octaheme cytochrome c 1426255 13098261 DAMO_1669 Candidatus Methylomirabilis oxyfera octaheme cytochrome c YP_003206558.1 1423685 R 671143 CDS YP_003206559.1 392374726 13098262 complement(1426355..1427164) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1427164 13098262 DAMO_1670 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206559.1 1426355 R 671143 CDS YP_003206560.1 392374727 13098263 complement(1427238..1428008) 1 NC_013260.1 cytochrome b6 1428008 petB 13098263 petB Candidatus Methylomirabilis oxyfera cytochrome b6 YP_003206560.1 1427238 R 671143 CDS YP_003206561.1 392374728 13098264 complement(1428050..1428643) 1 NC_013260.1 Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) 1428643 petC 13098264 petC Candidatus Methylomirabilis oxyfera Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) YP_003206561.1 1428050 R 671143 CDS YP_003206562.1 392374729 13098265 1428851..1429018 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1429018 13098265 DAMO_1673 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206562.1 1428851 D 671143 CDS YP_003206563.1 392374730 13098266 complement(1429299..1430150) 1 NC_013260.1 transposase 1430150 13098266 DAMO_1674 Candidatus Methylomirabilis oxyfera transposase YP_003206563.1 1429299 R 671143 CDS YP_003206564.1 392374731 13098267 complement(1430147..1430467) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1430467 13098267 DAMO_1675 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206564.1 1430147 R 671143 CDS YP_003206565.1 392374732 13098673 1430446..1430715 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1430715 13098673 DAMO_1676 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206565.1 1430446 D 671143 CDS YP_003206566.1 392374733 13098268 1430663..1430836 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1430836 13098268 DAMO_1677 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206566.1 1430663 D 671143 CDS YP_003206567.1 392374734 13098269 1430915..1431667 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1431667 13098269 DAMO_1678 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206567.1 1430915 D 671143 CDS YP_003206568.1 392374735 13098270 complement(1432015..1432314) 1 NC_013260.1 Plasmid maintenance system antidote protein 1432314 13098270 DAMO_1679 Candidatus Methylomirabilis oxyfera Plasmid maintenance system antidote protein YP_003206568.1 1432015 R 671143 CDS YP_003206569.1 392374736 13098644 complement(1432327..1432611) 1 NC_013260.1 Plasmid maintenance system killer 1432611 13098644 DAMO_1680 Candidatus Methylomirabilis oxyfera Plasmid maintenance system killer YP_003206569.1 1432327 R 671143 CDS YP_003206570.1 392374737 13098645 1432577..1432780 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1432780 13098645 DAMO_1681 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206570.1 1432577 D 671143 CDS YP_003206571.1 392374738 13098271 complement(1432870..1433223) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1433223 13098271 DAMO_1682 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206571.1 1432870 R 671143 CDS YP_003206572.1 392374739 13098272 1433039..1434415 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14600241, 15563598; Product type t : transporter; ammonium transport protein 1434415 amtB 13098272 amtB Candidatus Methylomirabilis oxyfera ammonium transport protein YP_003206572.1 1433039 D 671143 CDS YP_003206573.1 392374740 13098273 1434771..1435277 1 NC_013260.1 Universal stress protein family 1435277 13098273 DAMO_1684 Candidatus Methylomirabilis oxyfera Universal stress protein family YP_003206573.1 1434771 D 671143 CDS YP_003206574.1 392374741 13098274 complement(1435468..1436382) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1436382 13098274 DAMO_1685 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206574.1 1435468 R 671143 CDS YP_003206575.1 392374742 13098275 complement(1436422..1437498) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; ATPase of the MinD/MRP superfamily (mrp-like)(ATP/GTP-binding protein) 1437498 13098275 DAMO_1686 Candidatus Methylomirabilis oxyfera ATPase of the MinD/MRP superfamily (mrp-like)(ATP/GTP-binding protein) YP_003206575.1 1436422 R 671143 CDS YP_003206576.1 392374743 13098276 complement(1437492..1437833) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1437833 13098276 DAMO_1687 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206576.1 1437492 R 671143 CDS YP_003206577.1 392374744 13098277 complement(1437900..1439228) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1439228 13098277 DAMO_1688 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206577.1 1437900 R 671143 CDS YP_003206578.1 392374745 13098278 complement(1439197..1439763) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1439763 13098278 DAMO_1689 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206578.1 1439197 R 671143 CDS YP_003206579.1 392374746 13098279 complement(1439880..1440545) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Transcriptional regulator, Crp/Fnr family 1440545 13098279 DAMO_1690 Candidatus Methylomirabilis oxyfera Transcriptional regulator, Crp/Fnr family YP_003206579.1 1439880 R 671143 CDS YP_003206580.1 392374747 13098280 complement(1440730..1440960) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1440960 13098280 DAMO_1691 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206580.1 1440730 R 671143 CDS YP_003206581.1 392374748 13099901 complement(1440961..1441041) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1441041 13099901 DAMO_1692 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206581.1 1440961 R 671143 CDS YP_003206582.1 392374749 13098281 complement(1441108..1441737) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1441737 13098281 DAMO_1693 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206582.1 1441108 R 671143 CDS YP_003206583.1 392374750 13098282 1442209..1442751 1 NC_013260.1 thiol-disulfide oxidoreductase resA 1442751 resA 13098282 resA Candidatus Methylomirabilis oxyfera thiol-disulfide oxidoreductase resA YP_003206583.1 1442209 D 671143 CDS YP_003206584.1 392374751 13098283 1442998..1443354 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1443354 13098283 DAMO_1695 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206584.1 1442998 D 671143 CDS YP_003206585.1 392374752 13098284 1443182..1444558 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1444558 13098284 DAMO_1696 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206585.1 1443182 D 671143 CDS YP_003206586.1 392374753 13098285 1444656..1446200 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1446200 13098285 DAMO_1697 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206586.1 1444656 D 671143 CDS YP_003206587.1 392374754 13098286 complement(1446149..1446292) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1446292 13098286 DAMO_1698 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206587.1 1446149 R 671143 CDS YP_003206588.1 392374755 13098287 1446225..1446812 1 NC_013260.1 Response regulator receiver 1446812 13098287 DAMO_1699 Candidatus Methylomirabilis oxyfera Response regulator receiver YP_003206588.1 1446225 D 671143 CDS YP_003206589.1 392374756 13098288 1446933..1447394 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1447394 13098288 DAMO_1700 Candidatus Methylomirabilis oxyfera membrane protein YP_003206589.1 1446933 D 671143 CDS YP_003206590.1 392374757 13098289 1447476..1448804 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; NADH dehydrogenase FAD-containing subunit transmembrane protein 1448804 13098289 DAMO_1701 Candidatus Methylomirabilis oxyfera NADH dehydrogenase FAD-containing subunit transmembrane protein YP_003206590.1 1447476 D 671143 CDS YP_003206591.1 392374758 13098290 1449012..1449947 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Micrococcal nuclease 1449947 13098290 DAMO_1702 Candidatus Methylomirabilis oxyfera Micrococcal nuclease YP_003206591.1 1449012 D 671143 CDS YP_003206592.1 392374759 13098721 1450112..1450312 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1450312 13098721 DAMO_1703 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206592.1 1450112 D 671143 CDS YP_003206593.1 392374760 13098291 1450309..1450707 1 NC_013260.1 PilT-like protein 1450707 13098291 DAMO_1704 Candidatus Methylomirabilis oxyfera PilT-like protein YP_003206593.1 1450309 D 671143 CDS YP_003206594.1 392374761 13098292 1450829..1451164 1 NC_013260.1 DNA polymerase, beta-like region 1451164 13098292 DAMO_1705 Candidatus Methylomirabilis oxyfera DNA polymerase, beta-like region YP_003206594.1 1450829 D 671143 CDS YP_003206595.1 392374762 13098293 1451151..1451576 1 NC_013260.1 HEPN domain-containing protein 1451576 13098293 DAMO_1706 Candidatus Methylomirabilis oxyfera HEPN domain-containing protein YP_003206595.1 1451151 D 671143 CDS YP_003206596.1 392374763 13098294 1451691..1452314 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1452314 13098294 DAMO_1707 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206596.1 1451691 D 671143 CDS YP_003206597.1 392374764 13098295 1452125..1452571 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1452571 13098295 DAMO_1708 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206597.1 1452125 D 671143 CDS YP_003206598.1 392374765 13098296 complement(1452630..1453646) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1453646 13098296 DAMO_1709 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206598.1 1452630 R 671143 CDS YP_003206599.1 392374766 13098297 complement(1453893..1454336) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1454336 13098297 DAMO_1710 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206599.1 1453893 R 671143 CDS YP_003206600.1 392374767 13098298 1454390..1454638 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1454638 13098298 DAMO_1711 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206600.1 1454390 D 671143 CDS YP_003206601.1 392374768 13098299 1454695..1455081 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1455081 13098299 DAMO_1712 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206601.1 1454695 D 671143 CDS YP_003206602.1 392374769 13098300 1455230..1455946 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1455946 13098300 DAMO_1713 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206602.1 1455230 D 671143 CDS YP_003206603.1 392374770 13098301 1456085..1457647 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1457647 13098301 DAMO_1714 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206603.1 1456085 D 671143 CDS YP_003206604.1 392374771 13098302 1457792..1458106 1 NC_013260.1 flagellar protein FhlB 1458106 13098302 DAMO_1715 Candidatus Methylomirabilis oxyfera flagellar protein FhlB YP_003206604.1 1457792 D 671143 CDS YP_003206605.1 392374772 13098303 complement(1458136..1458849) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1458849 13098303 DAMO_1716 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206605.1 1458136 R 671143 CDS YP_003206606.1 392374773 13098304 1459595..1461316 1 NC_013260.1 histidine kinase, HAMP region:chemotaxis sensory transducer 1461316 13098304 DAMO_1717 Candidatus Methylomirabilis oxyfera histidine kinase, HAMP region:chemotaxis sensory transducer YP_003206606.1 1459595 D 671143 CDS YP_003206607.1 392374774 13098305 1461461..1464487 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1464487 13098305 DAMO_1718 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206607.1 1461461 D 671143 CDS YP_003206608.1 392374775 13098306 complement(1464537..1465403) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1465403 13098306 DAMO_1719 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206608.1 1464537 R 671143 CDS YP_003206609.1 392374776 13098307 complement(1465467..1468379) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1468379 13098307 DAMO_1720 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206609.1 1465467 R 671143 CDS YP_003206610.1 392374777 13098308 complement(1468453..1469259) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1469259 13098308 DAMO_1721 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206610.1 1468453 R 671143 CDS YP_003206611.1 392374778 13098309 complement(1469564..1470256) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1470256 13098309 DAMO_1722 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206611.1 1469564 R 671143 CDS YP_003206612.1 392374779 13098310 complement(1470715..1471461) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1471461 13098310 DAMO_1723 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206612.1 1470715 R 671143 CDS YP_003206613.1 392374780 13098311 complement(1471491..1472261) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1472261 13098311 DAMO_1724 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206613.1 1471491 R 671143 CDS YP_003206614.1 392374781 13098312 1472887..1474593 1 NC_013260.1 histidine kinase, HAMP region:chemotaxis sensory transducer 1474593 13098312 DAMO_1725 Candidatus Methylomirabilis oxyfera histidine kinase, HAMP region:chemotaxis sensory transducer YP_003206614.1 1472887 D 671143 CDS YP_003206615.1 392374782 13098313 1474714..1476807 1 NC_013260.1 methyl-accepting chemotaxis sensory transducer 1476807 13098313 DAMO_1726 Candidatus Methylomirabilis oxyfera methyl-accepting chemotaxis sensory transducer YP_003206615.1 1474714 D 671143 CDS YP_003206616.1 392374783 13098314 complement(1476860..1477204) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1477204 13098314 DAMO_1727 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206616.1 1476860 R 671143 CDS YP_003206617.1 392374784 13098315 1476902..1477306 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1477306 13098315 DAMO_1728 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206617.1 1476902 D 671143 CDS YP_003206618.1 392374785 13098316 complement(1477372..1478016) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1478016 13098316 DAMO_1729 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206618.1 1477372 R 671143 CDS YP_003206619.1 392374786 13098317 complement(1477997..1478878) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1478878 13098317 DAMO_1730 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206619.1 1477997 R 671143 CDS YP_003206620.1 392374787 13098318 complement(1478859..1479434) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1479434 13098318 DAMO_1731 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206620.1 1478859 R 671143 CDS YP_003206621.1 392374788 13098319 complement(1479522..1480901) 1 NC_013260.1 RNA polymerase sigma factor whiG 1480901 13098319 DAMO_1732 Candidatus Methylomirabilis oxyfera RNA polymerase sigma factor whiG YP_003206621.1 1479522 R 671143 CDS YP_003206622.1 392374789 13098320 complement(1480960..1481820) 1 NC_013260.1 Cobyrinic acid a,c-diamide synthase 1481820 13098320 DAMO_1733 Candidatus Methylomirabilis oxyfera Cobyrinic acid a,c-diamide synthase YP_003206622.1 1480960 R 671143 CDS YP_003206623.1 392374790 13098321 complement(1481817..1482983) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar biosynthesis protein flhF (Flagella-associated GTP-binding protein) 1482983 13098321 DAMO_1734 Candidatus Methylomirabilis oxyfera Flagellar biosynthesis protein flhF (Flagella-associated GTP-binding protein) YP_003206623.1 1481817 R 671143 CDS YP_003206624.1 392374791 13098322 complement(1482973..1485066) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type t : transporter; flagellar biosynthesis protein flhA 1485066 flhA 13098322 flhA Candidatus Methylomirabilis oxyfera flagellar biosynthesis protein flhA YP_003206624.1 1482973 R 671143 CDS YP_003206625.1 392374792 13098323 complement(1485063..1486142) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 10564516, 8002587; Product type t : transporter; flagellar biosynthetic protein FlhB 1486142 flhB 13098323 flhB Candidatus Methylomirabilis oxyfera flagellar biosynthetic protein FlhB YP_003206625.1 1485063 R 671143 CDS YP_003206626.1 392374793 13098324 complement(1486129..1486929) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar biosynthetic protein fliR 1486929 13098324 DAMO_1737 Candidatus Methylomirabilis oxyfera Flagellar biosynthetic protein fliR YP_003206626.1 1486129 R 671143 CDS YP_003206627.1 392374794 13098325 complement(1487012..1487281) 1 NC_013260.1 flagellar biosynthetic protein fliQ 1487281 fliQ 13098325 fliQ Candidatus Methylomirabilis oxyfera flagellar biosynthetic protein fliQ YP_003206627.1 1487012 R 671143 CDS YP_003206628.1 392374795 13098326 complement(1487295..1488026) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 10564516, 8282695; Product type t : transporter; flagellar transport protein FliP 1488026 fliP 13098326 fliP Candidatus Methylomirabilis oxyfera flagellar transport protein FliP YP_003206628.1 1487295 R 671143 CDS YP_003206629.1 392374796 13098327 complement(1488023..1488571) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1488571 13098327 DAMO_1740 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206629.1 1488023 R 671143 CDS YP_003206630.1 392374797 13098328 complement(1488784..1489758) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar motor switch phosphatase fliY (CheY-P phosphatase fliY) (Flagellar motor switch protein fliY) 1489758 13098328 DAMO_1741 Candidatus Methylomirabilis oxyfera Flagellar motor switch phosphatase fliY (CheY-P phosphatase fliY) (Flagellar motor switch protein fliY) YP_003206630.1 1488784 R 671143 CDS YP_003206631.1 392374798 13098329 complement(1489742..1490743) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar motor switch protein fliM 1490743 13098329 DAMO_1742 Candidatus Methylomirabilis oxyfera Flagellar motor switch protein fliM YP_003206631.1 1489742 R 671143 CDS YP_003206632.1 392374799 13098330 complement(1491113..1491664) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar basal body-associated protein FliL 1491664 13098330 DAMO_1743 Candidatus Methylomirabilis oxyfera Flagellar basal body-associated protein FliL YP_003206632.1 1491113 R 671143 CDS YP_003206633.1 392374800 13100207 complement(1491689..1491883) 1 NC_013260.1 hypothetical protein 1491883 13100207 DAMO_1744 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206633.1 1491689 R 671143 CDS YP_003206634.1 392374801 13100208 complement(1491883..1492086) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1492086 13100208 DAMO_1745 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206634.1 1491883 R 671143 CDS YP_003206635.1 392374802 13098331 complement(1491956..1493113) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1493113 13098331 DAMO_1746 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206635.1 1491956 R 671143 CDS YP_003206636.1 392374803 13100213 complement(1493153..1494391) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar hook protein flgE 1494391 13100213 DAMO_1747 Candidatus Methylomirabilis oxyfera Flagellar hook protein flgE YP_003206636.1 1493153 R 671143 CDS YP_003206637.1 392374804 13100212 complement(1494476..1495180) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8157595; Product type s : structure; basal-body rod modification protein flgD 1495180 13100212 DAMO_1748 Candidatus Methylomirabilis oxyfera basal-body rod modification protein flgD YP_003206637.1 1494476 R 671143 CDS YP_003206638.1 392374805 13098332 complement(1495238..1496023) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1496023 13098332 DAMO_1749 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206638.1 1495238 R 671143 CDS YP_003206639.1 392374806 13098333 complement(1496075..1498345) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1498345 13098333 DAMO_1750 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206639.1 1496075 R 671143 CDS YP_003206640.1 392374807 13098334 complement(1498342..1499106) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1499106 13098334 DAMO_1751 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206640.1 1498342 R 671143 CDS YP_003206641.1 392374808 13098335 complement(1499103..1499567) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar biosynthesis chaperone 1499567 13098335 DAMO_1752 Candidatus Methylomirabilis oxyfera Flagellar biosynthesis chaperone YP_003206641.1 1499103 R 671143 CDS YP_003206642.1 392374809 13098336 complement(1499583..1501022) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; flagellum-specific ATP synthase 1501022 fliI 13098336 fliI Candidatus Methylomirabilis oxyfera flagellum-specific ATP synthase YP_003206642.1 1499583 R 671143 CDS YP_003206643.1 392374810 13098337 complement(1501019..1501696) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar assembly protein flih 1501696 13098337 DAMO_1754 Candidatus Methylomirabilis oxyfera Flagellar assembly protein flih YP_003206643.1 1501019 R 671143 CDS YP_003206644.1 392374811 13098338 complement(1501701..1502717) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure; flagellar motor switch protein fliG 1502717 fliG 13098338 fliG Candidatus Methylomirabilis oxyfera flagellar motor switch protein fliG YP_003206644.1 1501701 R 671143 CDS YP_003206645.1 392374812 13098339 complement(1502714..1504333) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type s : structure; flagellar basal body M-ring protein 1504333 fliF 13098339 fliF Candidatus Methylomirabilis oxyfera flagellar basal body M-ring protein YP_003206645.1 1502714 R 671143 CDS YP_003206646.1 392374813 13098340 complement(1504384..1504686) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1504686 13098340 DAMO_1757 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206646.1 1504384 R 671143 CDS YP_003206647.1 392374814 13098341 complement(1504803..1505225) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 2129540; Product type s : structure; flagellar basal-body rod protein FlgC (cell-proximal rod protein) 1505225 flgC 13098341 flgC Candidatus Methylomirabilis oxyfera flagellar basal-body rod protein FlgC (cell-proximal rod protein) YP_003206647.1 1504803 R 671143 CDS YP_003206648.1 392374815 13098342 complement(1505244..1505606) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar basal-body rod protein flgB 1505606 13098342 DAMO_1759 Candidatus Methylomirabilis oxyfera Flagellar basal-body rod protein flgB YP_003206648.1 1505244 R 671143 CDS YP_003206649.1 392374816 13098343 complement(1505769..1507154) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator 1507154 13098343 DAMO_1760 Candidatus Methylomirabilis oxyfera response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator YP_003206649.1 1505769 R 671143 CDS YP_003206650.1 392374817 13098344 complement(1507156..1508493) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Sensor protein 1508493 13098344 DAMO_1761 Candidatus Methylomirabilis oxyfera Sensor protein YP_003206650.1 1507156 R 671143 CDS YP_003206651.1 392374818 13100211 complement(1508532..1508900) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type r : regulator; response regulator receiver (CheY-like protein) 1508900 13100211 DAMO_1762 Candidatus Methylomirabilis oxyfera response regulator receiver (CheY-like protein) YP_003206651.1 1508532 R 671143 CDS YP_003206652.1 392374819 13098345 1508929..1509111 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1509111 13098345 DAMO_1763 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206652.1 1508929 D 671143 CDS YP_003206653.1 392374820 13100210 1509472..1510338 1 NC_013260.1 chemotaxis protein 1510338 13100210 DAMO_1764 Candidatus Methylomirabilis oxyfera chemotaxis protein YP_003206653.1 1509472 D 671143 CDS YP_003206654.1 392374821 13100209 1510335..1511261 1 NC_013260.1 outer membrane protein, OmpA/MotB family 1511261 13100209 DAMO_1765 Candidatus Methylomirabilis oxyfera outer membrane protein, OmpA/MotB family YP_003206654.1 1510335 D 671143 CDS YP_003206655.1 392374822 13098346 complement(1511290..1512753) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator 1512753 13098346 DAMO_1766 Candidatus Methylomirabilis oxyfera response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator YP_003206655.1 1511290 R 671143 CDS YP_003206656.1 392374823 13100203 complement(1512753..1513808) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1513808 13100203 DAMO_1767 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206656.1 1512753 R 671143 CDS YP_003206657.1 392374824 13098347 1513707..1513898 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1513898 13098347 DAMO_1768 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206657.1 1513707 D 671143 CDS YP_003206658.1 392374825 13098348 1514041..1514172 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1514172 13098348 DAMO_1769 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206658.1 1514041 D 671143 CDS YP_003206659.1 392374826 13098349 complement(1514116..1515588) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Response regulator receiver modulated metal dependent phosphohydrolase 1515588 13098349 DAMO_1770 Candidatus Methylomirabilis oxyfera Response regulator receiver modulated metal dependent phosphohydrolase YP_003206659.1 1514116 R 671143 CDS YP_003206660.1 392374827 13098350 complement(1515608..1516264) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Response regulator receiver protein 1516264 13098350 DAMO_1771 Candidatus Methylomirabilis oxyfera Response regulator receiver protein YP_003206660.1 1515608 R 671143 CDS YP_003206661.1 392374828 13098351 complement(1516288..1516635) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1516635 13098351 DAMO_1772 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206661.1 1516288 R 671143 CDS YP_003206662.1 392374829 13098352 complement(1516647..1516982) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1516982 13098352 DAMO_1773 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206662.1 1516647 R 671143 CDS YP_003206663.1 392374830 13098353 complement(1517025..1517390) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1517390 13098353 DAMO_1774 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206663.1 1517025 R 671143 CDS YP_003206664.1 392374831 13098354 complement(1517418..1518881) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1518881 13098354 DAMO_1775 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206664.1 1517418 R 671143 CDS YP_003206665.1 392374832 13098355 complement(1518899..1519306) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1519306 13098355 DAMO_1776 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206665.1 1518899 R 671143 CDS YP_003206666.1 392374833 13098356 complement(1519419..1520258) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 2190210; Product type s : structure; flagellin 1520258 13098356 DAMO_1777 Candidatus Methylomirabilis oxyfera flagellin YP_003206666.1 1519419 R 671143 CDS YP_003206667.1 392374834 13098357 complement(1520358..1522226) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1522226 13098357 DAMO_1778 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206667.1 1520358 R 671143 CDS YP_003206668.1 392374835 13098358 complement(1522547..1524892) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1524892 13098358 DAMO_1779 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206668.1 1522547 R 671143 CDS YP_003206669.1 392374836 13098359 complement(1524889..1526940) 1 NC_013260.1 hypothetical protein 1526940 13098359 DAMO_1780 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206669.1 1524889 R 671143 CDS YP_003206670.1 392374837 13098360 complement(1526950..1527828) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; HD domain protein 1527828 13098360 DAMO_1781 Candidatus Methylomirabilis oxyfera HD domain protein YP_003206670.1 1526950 R 671143 CDS YP_003206671.1 392374838 13098361 complement(1528049..1529740) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1529740 13098361 DAMO_1782 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206671.1 1528049 R 671143 CDS YP_003206672.1 392374839 13098362 complement(1529743..1538625) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1538625 13098362 DAMO_1783 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206672.1 1529743 R 671143 CDS YP_003206673.1 392374840 13098363 complement(1538622..1539881) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Methyltransferase type 11 1539881 13098363 DAMO_1784 Candidatus Methylomirabilis oxyfera Methyltransferase type 11 YP_003206673.1 1538622 R 671143 CDS YP_003206674.1 392374841 13098364 complement(1539963..1541021) 1 NC_013260.1 NeuB family protein 1541021 13098364 DAMO_1785 Candidatus Methylomirabilis oxyfera NeuB family protein YP_003206674.1 1539963 R 671143 CDS YP_003206675.1 392374842 13098365 complement(1541014..1541607) 1 NC_013260.1 formyl transferase domain protein 1541607 13098365 DAMO_1786 Candidatus Methylomirabilis oxyfera formyl transferase domain protein YP_003206675.1 1541014 R 671143 CDS YP_003206676.1 392374843 13098366 complement(1541609..1542715) 1 NC_013260.1 hypothetical protein 1542715 13098366 DAMO_1787 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206676.1 1541609 R 671143 CDS YP_003206677.1 392374844 13098367 complement(1542712..1543572) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; NeuA 1543572 13098367 DAMO_1788 Candidatus Methylomirabilis oxyfera NeuA YP_003206677.1 1542712 R 671143 CDS YP_003206678.1 392374845 13098368 complement(1543569..1544723) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; polysaccharide biosynthesis protein 1544723 rkpM 13098368 rkpM Candidatus Methylomirabilis oxyfera polysaccharide biosynthesis protein YP_003206678.1 1543569 R 671143 CDS YP_003206679.1 392374846 13098369 complement(1544727..1545725) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1545725 13098369 DAMO_1790 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206679.1 1544727 R 671143 CDS YP_003206680.1 392374847 13098370 complement(1546447..1547166) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1547166 13098370 DAMO_1791 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206680.1 1546447 R 671143 CDS YP_003206681.1 392374848 13098371 1547467..1548039 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1548039 13098371 DAMO_1792 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206681.1 1547467 D 671143 CDS YP_003206682.1 392374849 13098372 1548088..1548267 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1548267 13098372 DAMO_1793 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206682.1 1548088 D 671143 CDS YP_003206683.1 392374850 13098373 1548337..1548567 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1548567 13098373 DAMO_1794 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206683.1 1548337 D 671143 CDS YP_003206684.1 392374851 13098374 1548564..1548740 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1548740 13098374 DAMO_1795 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206684.1 1548564 D 671143 CDS YP_003206685.1 392374852 13098375 complement(1548805..1548990) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1548990 13098375 DAMO_1796 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206685.1 1548805 R 671143 CDS YP_003206686.1 392374853 13098376 1549161..1549733 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1549733 13098376 DAMO_1797 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206686.1 1549161 D 671143 CDS YP_003206687.1 392374854 13098732 1549813..1550376 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1550376 13098732 DAMO_1798 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206687.1 1549813 D 671143 CDS YP_003206688.1 392374855 13098377 1550198..1550686 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1550686 13098377 DAMO_1799 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206688.1 1550198 D 671143 CDS YP_003206689.1 392374856 13098378 complement(1550396..1550647) 1 NC_013260.1 carbon storage regulator 1550647 13098378 DAMO_1800 Candidatus Methylomirabilis oxyfera carbon storage regulator YP_003206689.1 1550396 R 671143 CDS YP_003206690.1 392374857 13098379 complement(1550654..1551058) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar assembly factor fliW 1551058 13098379 DAMO_1801 Candidatus Methylomirabilis oxyfera Flagellar assembly factor fliW YP_003206690.1 1550654 R 671143 CDS YP_003206691.1 392374858 13098380 complement(1551110..1552033) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar hook-associated protein 3 1552033 13098380 DAMO_1802 Candidatus Methylomirabilis oxyfera Flagellar hook-associated protein 3 YP_003206691.1 1551110 R 671143 CDS YP_003206692.1 392374859 13098381 complement(1552071..1552472) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1552472 13098381 DAMO_1803 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206692.1 1552071 R 671143 CDS YP_003206693.1 392374860 13098382 complement(1552554..1553954) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Flagellar hook-associated protein 1 (HAP1) 1553954 13098382 DAMO_1804 Candidatus Methylomirabilis oxyfera Flagellar hook-associated protein 1 (HAP1) YP_003206693.1 1552554 R 671143 CDS YP_003206694.1 392374861 13098383 complement(1553967..1554467) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1554467 13098383 DAMO_1805 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206694.1 1553967 R 671143 CDS YP_003206695.1 392374862 13098384 complement(1554577..1554885) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; FlgM family protein 1554885 13098384 DAMO_1806 Candidatus Methylomirabilis oxyfera FlgM family protein YP_003206695.1 1554577 R 671143 CDS YP_003206696.1 392374863 13098385 complement(1554954..1555304) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1555304 13098385 DAMO_1807 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206696.1 1554954 R 671143 CDS YP_003206697.1 392374864 13098386 complement(1555323..1556441) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 2129540, 2544561; Product type s : structure; flagellar P-ring protein (basal body P-ring protein) 1556441 flgI 13098386 flgI Candidatus Methylomirabilis oxyfera flagellar P-ring protein (basal body P-ring protein) YP_003206697.1 1555323 R 671143 CDS YP_003206698.1 392374865 13098387 complement(1556529..1557143) 1 NC_013260.1 hypothetical protein 1557143 13098387 DAMO_1809 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206698.1 1556529 R 671143 CDS YP_003206699.1 392374866 13098388 complement(1557143..1558198) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1558198 13098388 DAMO_1810 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206699.1 1557143 R 671143 CDS YP_003206700.1 392374867 13098389 complement(1558234..1559022) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 2129540; Product type s : structure; flagellar basal-body rod protein flgG (Distal rod protein) 1559022 flgG 13098389 flgG Candidatus Methylomirabilis oxyfera flagellar basal-body rod protein flgG (Distal rod protein) YP_003206700.1 1558234 R 671143 CDS YP_003206701.1 392374868 13098390 complement(1559040..1559777) 1 NC_013260.1 flagellar basal body and hook proteins 1559777 FlgE 13098390 FlgE Candidatus Methylomirabilis oxyfera flagellar basal body and hook proteins YP_003206701.1 1559040 R 671143 CDS YP_003206702.1 392374869 13098391 complement(1559895..1560902) 1 NC_013260.1 hypothetical protein 1560902 13098391 DAMO_1813 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206702.1 1559895 R 671143 CDS YP_003206703.1 392374870 13098392 complement(1560915..1561760) 1 NC_013260.1 metal-dependent phosphohydrolase, HD subdomain 1561760 13098392 DAMO_1814 Candidatus Methylomirabilis oxyfera metal-dependent phosphohydrolase, HD subdomain YP_003206703.1 1560915 R 671143 CDS YP_003206704.1 392374871 13098393 complement(1561757..1562083) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1562083 13098393 DAMO_1815 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206704.1 1561757 R 671143 CDS YP_003206705.1 392374872 13098394 complement(1562090..1562788) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1562788 13098394 DAMO_1816 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206705.1 1562090 R 671143 CDS YP_003206706.1 392374873 13100206 complement(1562963..1563517) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1563517 13100206 DAMO_1817 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206706.1 1562963 R 671143 CDS YP_003206707.1 392374874 13097105 complement(1563632..1564390) 1 NC_013260.1 motA/TolQ/ExbB proton channel 1564390 13097105 DAMO_1818 Candidatus Methylomirabilis oxyfera motA/TolQ/ExbB proton channel YP_003206707.1 1563632 R 671143 CDS YP_003206708.1 392374875 13097106 complement(1564402..1565616) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1565616 13097106 DAMO_1819 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206708.1 1564402 R 671143 CDS YP_003206709.1 392374876 13100205 1565673..1565921 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1565921 13100205 DAMO_1820 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206709.1 1565673 D 671143 CDS YP_003206710.1 392374877 13100204 complement(1565968..1567029) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15187186, 15720548, 15916598; Product type e : enzyme; chemotaxis Response Regulator protein CheB-glutamate methylesterase 1567029 cheB 13100204 cheB Candidatus Methylomirabilis oxyfera chemotaxis Response Regulator protein CheB-glutamate methylesterase YP_003206710.1 1565968 R 671143 CDS YP_003206711.1 392374878 13097107 complement(1567108..1567668) 1 NC_013260.1 MCP proteins methylation stimulator CheD 1567668 13097107 DAMO_1822 Candidatus Methylomirabilis oxyfera MCP proteins methylation stimulator CheD YP_003206711.1 1567108 R 671143 CDS YP_003206712.1 392374879 13097108 complement(1567665..1568582) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 15720548, 15916598, 9989504; Product type e : enzyme; chemotaxis protein methyltransferase 1568582 cheR 13097108 cheR Candidatus Methylomirabilis oxyfera chemotaxis protein methyltransferase YP_003206712.1 1567665 R 671143 CDS YP_003206713.1 392374880 13097109 complement(1568598..1569140) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 15187186, 15720548, 15916598; Product type r : regulator; chemotaxis protein cheW 1569140 cheW 13097109 cheW Candidatus Methylomirabilis oxyfera chemotaxis protein cheW YP_003206713.1 1568598 R 671143 CDS YP_003206714.1 392374881 13097110 complement(1569224..1571098) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Methyl-accepting chemotaxis I (Serine chemoreceptor protein) transmembrane protein 1571098 13097110 DAMO_1825 Candidatus Methylomirabilis oxyfera Methyl-accepting chemotaxis I (Serine chemoreceptor protein) transmembrane protein YP_003206714.1 1569224 R 671143 CDS YP_003206715.1 392374882 13097111 complement(1571174..1572988) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15720548, 15916598, 9989504; Product type r : regulator; chemotaxis protein cheA 1572988 cheA 13097111 cheA Candidatus Methylomirabilis oxyfera chemotaxis protein cheA YP_003206715.1 1571174 R 671143 CDS YP_003206716.1 392374883 13097112 complement(1573011..1573388) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15262956, 15327941, 9076738; Product type r : regulator; chemotaxis protein cheY 1573388 cheY 13097112 cheY Candidatus Methylomirabilis oxyfera chemotaxis protein cheY YP_003206716.1 1573011 R 671143 CDS YP_003206717.1 392374884 13097113 complement(1573466..1573558) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1573558 13097113 DAMO_1828 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206717.1 1573466 R 671143 CDS YP_003206718.1 392374885 13097114 1573647..1574417 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1574417 13097114 DAMO_1829 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206718.1 1573647 D 671143 CDS YP_003206719.1 392374886 13100041 complement(1574451..1577537) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1577537 13100041 DAMO_1830 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206719.1 1574451 R 671143 CDS YP_003206720.1 392374887 13100042 1577703..1577906 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1577906 13100042 DAMO_1831 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206720.1 1577703 D 671143 CDS YP_003206721.1 392374888 13097118 complement(1578567..1579169) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; HAM1 protein 1579169 13097118 DAMO_1833 Candidatus Methylomirabilis oxyfera HAM1 protein YP_003206721.1 1578567 R 671143 CDS YP_003206722.1 392374889 13097119 complement(1579206..1579982) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512253; Product type e : enzyme; RNase PH 1579982 rph 13097119 rph Candidatus Methylomirabilis oxyfera RNase PH YP_003206722.1 1579206 R 671143 CDS YP_003206723.1 392374890 13099869 complement(1579979..1580530) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1580530 13099869 DAMO_1835 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206723.1 1579979 R 671143 CDS YP_003206724.1 392374891 13097120 complement(1580551..1581918) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; N-acetylmuramoyl-L-alanine amidase 1581918 13097120 DAMO_1836 Candidatus Methylomirabilis oxyfera N-acetylmuramoyl-L-alanine amidase YP_003206724.1 1580551 R 671143 CDS YP_003206725.1 392374892 13097121 complement(1587897..1589144) 1 NC_013260.1 tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) 1589144 tyrS 13097121 tyrS Candidatus Methylomirabilis oxyfera tyrosyl-tRNA synthetase (Tyrosine--tRNA ligase) (TyrRS) YP_003206725.1 1587897 R 671143 CDS YP_003206726.1 392374893 13098741 complement(1589141..1589434) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1589434 13098741 DAMO_1845 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206726.1 1589141 R 671143 CDS YP_003206727.1 392374894 13097122 1589419..1591638 1 NC_013260.1 penicillin-binding protein 1A 1591638 mrcA 13097122 mrcA Candidatus Methylomirabilis oxyfera penicillin-binding protein 1A YP_003206727.1 1589419 D 671143 CDS YP_003206728.1 392374895 13097123 complement(1591780..1592400) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1592400 13097123 DAMO_1847 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206728.1 1591780 R 671143 CDS YP_003206729.1 392374896 13099886 complement(1592514..1593641) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1593641 13099886 DAMO_1848 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206729.1 1592514 R 671143 CDS YP_003206730.1 392374897 13099885 complement(1593638..1594720) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; alcohol dehydrogenase 1594720 13099885 DAMO_1849 Candidatus Methylomirabilis oxyfera alcohol dehydrogenase YP_003206730.1 1593638 R 671143 CDS YP_003206731.1 392374898 13099863 complement(1594686..1595048) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1595048 13099863 DAMO_1850 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206731.1 1594686 R 671143 CDS YP_003206732.1 392374899 13099862 complement(1595059..1595364) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1595364 13099862 DAMO_1851 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206732.1 1595059 R 671143 CDS YP_003206733.1 392374900 13099884 complement(1595357..1596223) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methenyl-tetrahydrofolate cyclohydrolase FolD 1596223 folD 13099884 folD Candidatus Methylomirabilis oxyfera bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methenyl-tetrahydrofolate cyclohydrolase FolD YP_003206733.1 1595357 R 671143 CDS YP_003206734.1 392374901 13098877 complement(1596233..1597009) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; metallo-phosphoesterase 1597009 13098877 DAMO_1853 Candidatus Methylomirabilis oxyfera metallo-phosphoesterase YP_003206734.1 1596233 R 671143 CDS YP_003206735.1 392374902 13097124 complement(1597241..1598806) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1598806 13097124 DAMO_1854 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206735.1 1597241 R 671143 CDS YP_003206736.1 392374903 13097125 complement(1599216..1599551) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1599551 13097125 DAMO_1855 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206736.1 1599216 R 671143 CDS YP_003206737.1 392374904 13097126 complement(1599559..1599876) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1599876 13097126 DAMO_1856 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206737.1 1599559 R 671143 CDS YP_003206738.1 392374905 13097127 complement(1599948..1602365) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1451792, 2127701; Product type e : enzyme; phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) 1602365 pheT 13097127 pheT Candidatus Methylomirabilis oxyfera phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) YP_003206738.1 1599948 R 671143 CDS YP_003206739.1 392374906 13097128 complement(1602798..1602965) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1602965 13097128 DAMO_1858 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206739.1 1602798 R 671143 CDS YP_003206740.1 392374907 13097129 1603071..1603271 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1603271 13097129 DAMO_1859 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206740.1 1603071 D 671143 CDS YP_003206741.1 392374908 13100217 1603268..1603624 1 NC_013260.1 PilT-like protein protein 1603624 13100217 DAMO_1860 Candidatus Methylomirabilis oxyfera PilT-like protein protein YP_003206741.1 1603268 D 671143 CDS YP_003206742.1 392374909 13097130 complement(1603751..1604803) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1451792, 2127701; Product type e : enzyme; phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) 1604803 pheS 13097130 pheS Candidatus Methylomirabilis oxyfera phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) YP_003206742.1 1603751 R 671143 CDS YP_003206743.1 392374910 13097131 complement(1604871..1605230) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L20 1605230 rplT 13097131 rplT Candidatus Methylomirabilis oxyfera 50S ribosomal protein L20 YP_003206743.1 1604871 R 671143 CDS YP_003206744.1 392374911 13099753 complement(1605352..1605555) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 50S ribosomal protein L35 1605555 rpmI 13099753 rpmI Candidatus Methylomirabilis oxyfera 50S ribosomal protein L35 YP_003206744.1 1605352 R 671143 CDS YP_003206745.1 392374912 13097132 complement(1605565..1606056) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type f : factor; translation initiation factor IF-3 1606056 infC 13097132 infC Candidatus Methylomirabilis oxyfera translation initiation factor IF-3 YP_003206745.1 1605565 R 671143 CDS YP_003206746.1 392374913 13097133 complement(1606067..1608109) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8031907; Product type e : enzyme; threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) 1608109 thrS 13097133 thrS Candidatus Methylomirabilis oxyfera threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS) YP_003206746.1 1606067 R 671143 CDS YP_003206747.1 392374914 13097134 complement(1608435..1609817) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator 1609817 13097134 DAMO_1866 Candidatus Methylomirabilis oxyfera response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator YP_003206747.1 1608435 R 671143 CDS YP_003206748.1 392374915 13097135 complement(1609838..1611163) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1611163 13097135 DAMO_1867 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206748.1 1609838 R 671143 CDS YP_003206749.1 392374916 13097136 1611318..1613054 1 NC_013260.1 hypothetical protein 1613054 13097136 DAMO_1868 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206749.1 1611318 D 671143 CDS YP_003206750.1 392374917 13098650 1613084..1613152 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1613152 13098650 DAMO_1869 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206750.1 1613084 D 671143 CDS YP_003206751.1 392374918 13098759 1613219..1614118 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1614118 13098759 DAMO_1870 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206751.1 1613219 D 671143 CDS YP_003206752.1 392374919 13098768 1614127..1614330 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1614330 13098768 DAMO_1871 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206752.1 1614127 D 671143 CDS YP_003206753.1 392374920 13098472 complement(1614253..1614435) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1614435 13098472 DAMO_1872 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206753.1 1614253 R 671143 CDS YP_003206754.1 392374921 13098848 1614601..1615035 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1615035 13098848 DAMO_1873 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206754.1 1614601 D 671143 CDS YP_003206755.1 392374922 13099861 complement(1615129..1615329) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1615329 13099861 DAMO_1874 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206755.1 1615129 R 671143 CDS YP_003206756.1 392374923 13097137 1615475..1615645 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1615645 13097137 DAMO_1875 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206756.1 1615475 D 671143 CDS YP_003206757.1 392374924 13097138 1615686..1617068 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12618438; Product type pr : putative regulator; response regulator in two-component regulatory system, sigma 54-dependent 1617068 13097138 DAMO_1876 Candidatus Methylomirabilis oxyfera response regulator in two-component regulatory system, sigma 54-dependent YP_003206757.1 1615686 D 671143 CDS YP_003206758.1 392374925 13097139 1617075..1618880 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Multi-sensor signal transduction histidine kinase 1618880 13097139 DAMO_1877 Candidatus Methylomirabilis oxyfera Multi-sensor signal transduction histidine kinase YP_003206758.1 1617075 D 671143 CDS YP_003206759.1 392374926 13097140 1618887..1619333 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1619333 13097140 DAMO_1878 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206759.1 1618887 D 671143 CDS YP_003206760.1 392374927 13097141 1619622..1620062 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1620062 13097141 DAMO_1879 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206760.1 1619622 D 671143 CDS YP_003206761.1 392374928 13097142 1620055..1620294 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1620294 13097142 DAMO_1880 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206761.1 1620055 D 671143 CDS YP_003206762.1 392374929 13097143 1620443..1620658 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1620658 13097143 DAMO_1881 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206762.1 1620443 D 671143 CDS YP_003206763.1 392374930 13097144 1620619..1621494 1 NC_013260.1 ABC phosphonate-binding periplasmic protein 1621494 13097144 DAMO_1882 Candidatus Methylomirabilis oxyfera ABC phosphonate-binding periplasmic protein YP_003206763.1 1620619 D 671143 CDS YP_003206764.1 392374931 13097145 1621509..1622327 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8755882; Product type t : transporter; phosphonates import ATP-binding protein phnC (ABC superfamily, atp_bind) 1622327 phnC 13097145 phnC Candidatus Methylomirabilis oxyfera phosphonates import ATP-binding protein phnC (ABC superfamily, atp_bind) YP_003206764.1 1621509 D 671143 CDS YP_003206765.1 392374932 13097146 1622278..1623165 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; phosphite transport system permease protein htxC 1623165 htxC 13097146 htxC Candidatus Methylomirabilis oxyfera phosphite transport system permease protein htxC YP_003206765.1 1622278 D 671143 CDS YP_003206766.1 392374933 13097147 1623165..1624208 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PhnE protein, phosphonate ABC transporter, putative membrane protein 1624208 13097147 DAMO_1885 Candidatus Methylomirabilis oxyfera PhnE protein, phosphonate ABC transporter, putative membrane protein YP_003206766.1 1623165 D 671143 CDS YP_003206767.1 392374934 13097148 complement(1624111..1624677) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1624677 13097148 DAMO_1886 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206767.1 1624111 R 671143 CDS YP_003206768.1 392374935 13097149 complement(1624697..1625227) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1625227 13097149 DAMO_1887 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206768.1 1624697 R 671143 CDS YP_003206769.1 392374936 13097150 1625349..1625609 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1625609 13097150 DAMO_1888 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206769.1 1625349 D 671143 CDS YP_003206770.1 392374937 13097151 complement(1625578..1627770) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; nitric-oxide reductase, qNOR-like (norZ) 1627770 norZ 13097151 norZ Candidatus Methylomirabilis oxyfera nitric-oxide reductase, qNOR-like (norZ) YP_003206770.1 1625578 R 671143 CDS YP_003206771.1 392374938 13097152 complement(1628070..1629215) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1629215 13097152 DAMO_1890 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206771.1 1628070 R 671143 CDS YP_003206772.1 392374939 13097153 complement(1629331..1629774) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1629774 13097153 DAMO_1891 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206772.1 1629331 R 671143 CDS YP_003206773.1 392374940 13098652 complement(1629771..1629992) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Ribbon-helix-helix protein 1629992 13098652 DAMO_1892 Candidatus Methylomirabilis oxyfera Ribbon-helix-helix protein YP_003206773.1 1629771 R 671143 CDS YP_003206774.1 392374941 13098456 complement(1630141..1630623) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1630623 13098456 DAMO_1893 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206774.1 1630141 R 671143 CDS YP_003206775.1 392374942 13097154 complement(1630823..1631893) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1631893 13097154 DAMO_1894 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206775.1 1630823 R 671143 CDS YP_003206776.1 392374943 13097155 complement(1631887..1632036) 1 NC_013260.1 hypothetical protein 1632036 13097155 DAMO_1895 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206776.1 1631887 R 671143 CDS YP_003206777.1 392374944 13097156 1632264..1632755 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1632755 13097156 DAMO_1896 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206777.1 1632264 D 671143 CDS YP_003206778.1 392374945 13097157 1632746..1633681 1 NC_013260.1 methionyl-tRNA formyltransferase 1633681 fmt 13097157 fmt Candidatus Methylomirabilis oxyfera methionyl-tRNA formyltransferase YP_003206778.1 1632746 D 671143 CDS YP_003206779.1 392374946 13098602 1633647..1635050 1 NC_013260.1 Sun protein 1635050 13098602 DAMO_1898 Candidatus Methylomirabilis oxyfera Sun protein YP_003206779.1 1633647 D 671143 CDS YP_003206780.1 392374947 13097158 1635047..1635631 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1635631 13097158 DAMO_1899 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206780.1 1635047 D 671143 CDS YP_003206781.1 392374948 13097159 1635750..1636004 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1636004 13097159 DAMO_1900 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206781.1 1635750 D 671143 CDS YP_003206782.1 392374949 13097160 complement(1636038..1636265) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1636265 13097160 DAMO_1901 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206782.1 1636038 R 671143 CDS YP_003206783.1 392374950 13097161 1636435..1637583 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1637583 13097161 DAMO_1902 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206783.1 1636435 D 671143 CDS YP_003206784.1 392374951 13097162 1637596..1638858 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Heavy metal efflux pump, CzcB family 1638858 13097162 DAMO_1903 Candidatus Methylomirabilis oxyfera Heavy metal efflux pump, CzcB family YP_003206784.1 1637596 D 671143 CDS YP_003206785.1 392374952 13097163 1638877..1641960 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; cation efflux system protein (CzcA/CusA-like) 1641960 13097163 DAMO_1904 Candidatus Methylomirabilis oxyfera cation efflux system protein (CzcA/CusA-like) YP_003206785.1 1638877 D 671143 CDS YP_003206786.1 392374953 13097164 1642231..1642566 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1642566 13097164 DAMO_1905 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206786.1 1642231 D 671143 CDS YP_003206787.1 392374954 13100214 1642850..1643833 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1643833 13100214 DAMO_1906 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206787.1 1642850 D 671143 CDS YP_003206788.1 392374955 13097165 1643841..1644212 1 NC_013260.1 Copper resistance protein CopC 1644212 13097165 DAMO_1907 Candidatus Methylomirabilis oxyfera Copper resistance protein CopC YP_003206788.1 1643841 D 671143 CDS YP_003206789.1 392374956 13097166 1644209..1645405 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1645405 13097166 DAMO_1908 Candidatus Methylomirabilis oxyfera membrane protein YP_003206789.1 1644209 D 671143 CDS YP_003206790.1 392374957 13097167 1645419..1645712 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1645712 13097167 DAMO_1909 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206790.1 1645419 D 671143 CDS YP_003206791.1 392374958 13097168 1645896..1646102 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1646102 13097168 DAMO_1910 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206791.1 1645896 D 671143 CDS YP_003206792.1 392374959 13097169 complement(1646099..1646302) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1646302 13097169 DAMO_1911 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206792.1 1646099 R 671143 CDS YP_003206793.1 392374960 13097170 complement(1646488..1646688) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1646688 13097170 DAMO_1912 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206793.1 1646488 R 671143 CDS YP_003206794.1 392374961 13097171 1646845..1647447 1 NC_013260.1 motA/TolQ/ExbB proton channel 1647447 13097171 DAMO_1913 Candidatus Methylomirabilis oxyfera motA/TolQ/ExbB proton channel YP_003206794.1 1646845 D 671143 CDS YP_003206795.1 392374962 13097172 1647444..1647863 1 NC_013260.1 biopolymer transport protein ExbD/TolR 1647863 13097172 DAMO_1914 Candidatus Methylomirabilis oxyfera biopolymer transport protein ExbD/TolR YP_003206795.1 1647444 D 671143 CDS YP_003206796.1 392374963 13097173 1647860..1648732 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Protein tonB2 1648732 13097173 DAMO_1915 Candidatus Methylomirabilis oxyfera Protein tonB2 YP_003206796.1 1647860 D 671143 CDS YP_003206797.1 392374964 13097174 1648770..1651112 1 NC_013260.1 TonB-dependent receptor 1651112 13097174 DAMO_1916 Candidatus Methylomirabilis oxyfera TonB-dependent receptor YP_003206797.1 1648770 D 671143 CDS YP_003206798.1 392374965 13097175 1651123..1652784 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1652784 13097175 DAMO_1917 Candidatus Methylomirabilis oxyfera membrane protein YP_003206798.1 1651123 D 671143 CDS YP_003206799.1 392374966 13097176 1653277..1654020 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1654020 13097176 DAMO_1918 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206799.1 1653277 D 671143 CDS YP_003206800.1 392374967 13097177 1654287..1654568 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1654568 13097177 DAMO_1919 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206800.1 1654287 D 671143 CDS YP_003206801.1 392374968 13097178 1654594..1655769 1 NC_013260.1 Biotin/lipoyl attachment:Secretion protein HlyD 1655769 13097178 DAMO_1920 Candidatus Methylomirabilis oxyfera Biotin/lipoyl attachment:Secretion protein HlyD YP_003206801.1 1654594 D 671143 CDS YP_003206802.1 392374969 13097179 1655766..1656968 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1656968 13097179 DAMO_1921 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206802.1 1655766 D 671143 CDS YP_003206803.1 392374970 13097180 1656970..1657656 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter ATP-binding protein 1657656 13097180 DAMO_1922 Candidatus Methylomirabilis oxyfera ABC transporter ATP-binding protein YP_003206803.1 1656970 D 671143 CDS YP_003206804.1 392374971 13097181 1657819..1658370 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; RNA polymerase sigma factor 1658370 13097181 DAMO_1923 Candidatus Methylomirabilis oxyfera RNA polymerase sigma factor YP_003206804.1 1657819 D 671143 CDS YP_003206805.1 392374972 13097182 1658396..1659160 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1659160 13097182 DAMO_1924 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206805.1 1658396 D 671143 CDS YP_003206806.1 392374973 13097183 1659138..1659341 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1659341 13097183 DAMO_1925 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206806.1 1659138 D 671143 CDS YP_003206807.1 392374974 13097184 1659304..1659501 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1659501 13097184 DAMO_1926 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206807.1 1659304 D 671143 CDS YP_003206808.1 392374975 13097185 1659696..1659938 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1659938 13097185 DAMO_1927 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206808.1 1659696 D 671143 CDS YP_003206809.1 392374976 13097186 1659993..1660472 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1660472 13097186 DAMO_1928 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206809.1 1659993 D 671143 CDS YP_003206810.1 392374977 13097187 1660543..1660830 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1660830 13097187 DAMO_1929 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206810.1 1660543 D 671143 CDS YP_003206811.1 392374978 13097188 1660733..1661149 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1661149 13097188 DAMO_1930 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206811.1 1660733 D 671143 CDS YP_003206812.1 392374979 13097189 1661146..1662507 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Outer membrane efflux protein 1662507 13097189 DAMO_1931 Candidatus Methylomirabilis oxyfera Outer membrane efflux protein YP_003206812.1 1661146 D 671143 CDS YP_003206813.1 392374980 13097190 1662527..1663726 1 NC_013260.1 Secretion protein HlyD 1663726 13097190 DAMO_1932 Candidatus Methylomirabilis oxyfera Secretion protein HlyD YP_003206813.1 1662527 D 671143 CDS YP_003206814.1 392374981 13097191 1663723..1667028 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; cation/multidrug efflux pump of the AcrB/AcrD/AcrF family 1667028 13097191 DAMO_1933 Candidatus Methylomirabilis oxyfera cation/multidrug efflux pump of the AcrB/AcrD/AcrF family YP_003206814.1 1663723 D 671143 CDS YP_003206815.1 392374982 13097192 1667137..1667586 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1667586 13097192 DAMO_1934 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206815.1 1667137 D 671143 CDS YP_003206816.1 392374983 13097193 1667568..1667768 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1667768 13097193 DAMO_1935 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206816.1 1667568 D 671143 CDS YP_003206817.1 392374984 13097194 complement(1668105..1668209) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1668209 13097194 DAMO_1936 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206817.1 1668105 R 671143 CDS YP_003206818.1 392374985 13097195 1668287..1668499 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1668499 13097195 DAMO_1937 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206818.1 1668287 D 671143 CDS YP_003206819.1 392374986 13097196 1668632..1669576 1 NC_013260.1 radical SAM protein 1669576 13097196 DAMO_1938 Candidatus Methylomirabilis oxyfera radical SAM protein YP_003206819.1 1668632 D 671143 CDS YP_003206820.1 392374987 13097197 1669778..1670524 1 NC_013260.1 Zinc/iron permease 1670524 13097197 DAMO_1939 Candidatus Methylomirabilis oxyfera Zinc/iron permease YP_003206820.1 1669778 D 671143 CDS YP_003206821.1 392374988 13097198 1670533..1671231 1 NC_013260.1 type 11 methyltransferase 1671231 13097198 DAMO_1940 Candidatus Methylomirabilis oxyfera type 11 methyltransferase YP_003206821.1 1670533 D 671143 CDS YP_003206822.1 392374989 13097199 1671228..1671509 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1671509 13097199 DAMO_1941 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206822.1 1671228 D 671143 CDS YP_003206823.1 392374990 13097200 1671506..1671679 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1671679 13097200 DAMO_1942 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206823.1 1671506 D 671143 CDS YP_003206824.1 392374991 13097201 1671676..1672431 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Zinc transporter zupT 1672431 13097201 DAMO_1943 Candidatus Methylomirabilis oxyfera Zinc transporter zupT YP_003206824.1 1671676 D 671143 CDS YP_003206825.1 392374992 13097202 1672428..1673672 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1673672 13097202 DAMO_1944 Candidatus Methylomirabilis oxyfera membrane protein YP_003206825.1 1672428 D 671143 CDS YP_003206826.1 392374993 13097203 1673669..1673839 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1673839 13097203 DAMO_1945 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206826.1 1673669 D 671143 CDS YP_003206827.1 392374994 13097204 complement(1673894..1676038) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1676038 13097204 DAMO_1946 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206827.1 1673894 R 671143 CDS YP_003206828.1 392374995 13097205 1676267..1676341 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1676341 13097205 DAMO_1947 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206828.1 1676267 D 671143 CDS YP_003206829.1 392374996 13097206 1676370..1676675 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1676675 13097206 DAMO_1948 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206829.1 1676370 D 671143 CDS YP_003206830.1 392374997 13097207 1676750..1676866 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1676866 13097207 DAMO_1949 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206830.1 1676750 D 671143 CDS YP_003206831.1 392374998 13097208 complement(1676921..1677148) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1677148 13097208 DAMO_1950 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206831.1 1676921 R 671143 CDS YP_003206832.1 392374999 13097209 1676987..1677508 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1677508 13097209 DAMO_1951 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206832.1 1676987 D 671143 CDS YP_003206833.1 392375000 13097210 1677402..1677635 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1677635 13097210 DAMO_1952 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206833.1 1677402 D 671143 CDS YP_003206834.1 392375001 13097211 1677735..1678214 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1678214 13097211 DAMO_1953 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206834.1 1677735 D 671143 CDS YP_003206835.1 392375002 13097212 1678358..1679086 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1679086 13097212 DAMO_1954 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206835.1 1678358 D 671143 CDS YP_003206836.1 392375003 13097213 1679389..1679649 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1679649 13097213 DAMO_1955 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206836.1 1679389 D 671143 CDS YP_003206837.1 392375004 13097214 1679633..1680877 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1680877 13097214 DAMO_1956 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206837.1 1679633 D 671143 CDS YP_003206838.1 392375005 13097215 1680881..1681561 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter related 1681561 13097215 DAMO_1957 Candidatus Methylomirabilis oxyfera ABC transporter related YP_003206838.1 1680881 D 671143 CDS YP_003206839.1 392375006 13097216 1681558..1682553 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1682553 13097216 DAMO_1958 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206839.1 1681558 D 671143 CDS YP_003206840.1 392375007 13097217 1682573..1683106 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pm : putative membrane component; nosL family protein 1683106 13097217 DAMO_1959 Candidatus Methylomirabilis oxyfera nosL family protein YP_003206840.1 1682573 D 671143 CDS YP_003206841.1 392375008 13097218 1683103..1684479 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1684479 13097218 DAMO_1960 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206841.1 1683103 D 671143 CDS YP_003206842.1 392375009 13097219 1684608..1684976 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1684976 13097219 DAMO_1961 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206842.1 1684608 D 671143 CDS YP_003206843.1 392375010 13097220 complement(1685168..1685692) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1685692 13097220 DAMO_1962 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206843.1 1685168 R 671143 CDS YP_003206844.1 392375011 13097221 1685766..1688084 1 NC_013260.1 TonB-dependent receptor protein 1688084 oprC 13097221 oprC Candidatus Methylomirabilis oxyfera TonB-dependent receptor protein YP_003206844.1 1685766 D 671143 CDS YP_003206845.1 392375012 13097222 1688142..1689008 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1689008 13097222 DAMO_1964 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206845.1 1688142 D 671143 CDS YP_003206846.1 392375013 13097223 1689212..1689550 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1689550 13097223 DAMO_1965 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206846.1 1689212 D 671143 CDS YP_003206847.1 392375014 13097224 complement(1689646..1693329) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase 1693329 metH 13097224 metH Candidatus Methylomirabilis oxyfera B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase YP_003206847.1 1689646 R 671143 CDS YP_003206848.1 392375015 13097225 complement(1693435..1693614) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1693614 13097225 DAMO_1967 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206848.1 1693435 R 671143 CDS YP_003206849.1 392375016 13097226 1693787..1695298 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1695298 13097226 DAMO_1968 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206849.1 1693787 D 671143 CDS YP_003206850.1 392375017 13097227 1695326..1695535 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1695535 13097227 DAMO_1969 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206850.1 1695326 D 671143 CDS YP_003206851.1 392375018 13097228 1695634..1695765 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1695765 13097228 DAMO_1970 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206851.1 1695634 D 671143 CDS YP_003206852.1 392375019 13097229 complement(1695811..1696827) 1 NC_013260.1 hypothetical protein 1696827 13097229 DAMO_1971 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206852.1 1695811 R 671143 CDS YP_003206853.1 392375020 13098628 1696935..1698356 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1698356 13098628 DAMO_1972 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206853.1 1696935 D 671143 CDS YP_003206854.1 392375021 13097230 1698523..1700892 1 NC_013260.1 type I restriction enzyme EcoAI R protein (R.EcoAI) 1700892 hsdR 13097230 hsdR Candidatus Methylomirabilis oxyfera type I restriction enzyme EcoAI R protein (R.EcoAI) YP_003206854.1 1698523 D 671143 CDS YP_003206855.1 392375022 13097231 1700966..1701574 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1701574 13097231 DAMO_1974 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206855.1 1700966 D 671143 CDS YP_003206856.1 392375023 13098537 1701571..1702440 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1702440 13098537 DAMO_1975 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206856.1 1701571 D 671143 CDS YP_003206857.1 392375024 13097232 1702450..1703961 1 NC_013260.1 type I restriction enzyme EcoEI M protein (M.EcoEI) 1703961 hsdM 13097232 hsdM Candidatus Methylomirabilis oxyfera type I restriction enzyme EcoEI M protein (M.EcoEI) YP_003206857.1 1702450 D 671143 CDS YP_003206858.1 392375025 13097233 1703979..1705151 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Restriction endonuclease S subunits 1705151 13097233 DAMO_1977 Candidatus Methylomirabilis oxyfera Restriction endonuclease S subunits YP_003206858.1 1703979 D 671143 CDS YP_003206859.1 392375026 13097234 1705152..1705391 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1705391 13097234 DAMO_1978 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206859.1 1705152 D 671143 CDS YP_003206860.1 392375027 13097235 1705619..1705945 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1705945 13097235 DAMO_1979 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206860.1 1705619 D 671143 CDS YP_003206861.1 392375028 13097236 1706069..1707601 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1707601 13097236 DAMO_1980 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206861.1 1706069 D 671143 CDS YP_003206862.1 392375029 13097237 1707623..1708684 1 NC_013260.1 periplasmic zinc binding protein 1708684 troA 13097237 troA Candidatus Methylomirabilis oxyfera periplasmic zinc binding protein YP_003206862.1 1707623 D 671143 CDS YP_003206863.1 392375030 13098452 1708755..1709525 1 NC_013260.1 ABC transporter ATPase 1709525 13098452 DAMO_1982 Candidatus Methylomirabilis oxyfera ABC transporter ATPase YP_003206863.1 1708755 D 671143 CDS YP_003206864.1 392375031 13097238 1709522..1710388 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1710388 13097238 DAMO_1983 Candidatus Methylomirabilis oxyfera membrane protein YP_003206864.1 1709522 D 671143 CDS YP_003206865.1 392375032 13097239 1710465..1711109 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1711109 13097239 DAMO_1984 Candidatus Methylomirabilis oxyfera membrane protein YP_003206865.1 1710465 D 671143 CDS YP_003206866.1 392375033 13098451 1711280..1711888 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 8999971; Product type e : enzyme; thioredoxin peroxidase (AhpC, Alkyl hydroperoxide reductase) 1711888 13098451 DAMO_1985 Candidatus Methylomirabilis oxyfera thioredoxin peroxidase (AhpC, Alkyl hydroperoxide reductase) YP_003206866.1 1711280 D 671143 CDS YP_003206867.1 392375034 13097240 1711911..1712171 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1712171 13097240 DAMO_1986 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206867.1 1711911 D 671143 CDS YP_003206868.1 392375035 13097241 1712196..1712678 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1712678 13097241 DAMO_1987 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206868.1 1712196 D 671143 CDS YP_003206869.1 392375036 13097242 1712771..1713544 1 NC_013260.1 hypothetical protein 1713544 13097242 DAMO_1988 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206869.1 1712771 D 671143 CDS YP_003206870.1 392375037 13097243 1713631..1714989 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; bifunctional folylpolyglutamate synthase/dihydrofolate synthase protein FolC 1714989 folC 13097243 folC Candidatus Methylomirabilis oxyfera bifunctional folylpolyglutamate synthase/dihydrofolate synthase protein FolC YP_003206870.1 1713631 D 671143 CDS YP_003206871.1 392375038 13098858 1715095..1716483 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8083170, 8407787, 8555230; Product type e : enzyme; bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase 1716483 glmU 13098858 glmU Candidatus Methylomirabilis oxyfera bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase YP_003206871.1 1715095 D 671143 CDS YP_003206872.1 392375039 13097244 1716488..1718323 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3134953, 3297136; Product type e : enzyme; L-glutamine:D-fructose-6-phosphate aminotransferase 1718323 glmS 13097244 glmS Candidatus Methylomirabilis oxyfera L-glutamine:D-fructose-6-phosphate aminotransferase YP_003206872.1 1716488 D 671143 CDS YP_003206873.1 392375040 13097245 complement(1718358..1719101) 1 NC_013260.1 Succinate dehydrogenase subunit B 1719101 13097245 DAMO_1992 Candidatus Methylomirabilis oxyfera Succinate dehydrogenase subunit B YP_003206873.1 1718358 R 671143 CDS YP_003206874.1 392375041 13097246 complement(1719101..1720903) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8637872; Product type e : enzyme; Succinate dehydrogenase flavoprotein subunit 1720903 sdhA 13097246 sdhA Candidatus Methylomirabilis oxyfera Succinate dehydrogenase flavoprotein subunit YP_003206874.1 1719101 R 671143 CDS YP_003206875.1 392375042 13097247 complement(1720903..1721646) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; succinate dehydrogenase membrane anchor subunit (sdhD) 1721646 13097247 DAMO_1994 Candidatus Methylomirabilis oxyfera succinate dehydrogenase membrane anchor subunit (sdhD) YP_003206875.1 1720903 R 671143 CDS YP_003206876.1 392375043 13097248 complement(1721688..1721960) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1721960 13097248 DAMO_1995 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206876.1 1721688 R 671143 CDS YP_003206877.1 392375044 13097249 complement(1722007..1722936) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; malate dehydrogenase 1722936 mdh 13097249 mdh Candidatus Methylomirabilis oxyfera malate dehydrogenase YP_003206877.1 1722007 R 671143 CDS YP_003206878.1 392375045 13097250 complement(1722969..1724387) 1 NC_013260.1 Isocitrate dehydrogenase [NADP] (IDH) (Oxalosuccinate decarboxylase) (NADP(+)-specific ICDH) (IDP) 1724387 icd 13097250 icd Candidatus Methylomirabilis oxyfera Isocitrate dehydrogenase [NADP] (IDH) (Oxalosuccinate decarboxylase) (NADP(+)-specific ICDH) (IDP) YP_003206878.1 1722969 R 671143 CDS YP_003206879.1 392375046 13100216 complement(1724560..1726590) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1726590 13100216 DAMO_1998 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206879.1 1724560 R 671143 CDS YP_003206880.1 392375047 13098396 complement(1726583..1727071) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1727071 13098396 DAMO_1999 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206880.1 1726583 R 671143 CDS YP_003206881.1 392375048 13098395 complement(1727151..1727663) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1727663 13098395 DAMO_2000 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206881.1 1727151 R 671143 CDS YP_003206882.1 392375049 13097251 complement(1727787..1729331) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10216873; Product type pt : putative transporter; glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein) 1729331 13097251 DAMO_2001 Candidatus Methylomirabilis oxyfera glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein) YP_003206882.1 1727787 R 671143 CDS YP_003206883.1 392375050 13098803 complement(1729318..1730085) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10216873; Product type pt : putative transporter; Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) 1730085 13098803 DAMO_2002 Candidatus Methylomirabilis oxyfera Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) YP_003206883.1 1729318 R 671143 CDS YP_003206884.1 392375051 13097252 complement(1730128..1731099) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1731099 13097252 DAMO_2003 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206884.1 1730128 R 671143 CDS YP_003206886.1 392375053 13098533 1731300..1731569 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1731569 13098533 DAMO_2005 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206886.1 1731300 D 671143 CDS YP_003206887.1 392375054 13097254 complement(1731785..1731982) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1731982 13097254 DAMO_2006 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206887.1 1731785 R 671143 CDS YP_003206888.1 392375055 13097255 complement(1732290..1732409) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1732409 13097255 DAMO_2007 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206888.1 1732290 R 671143 CDS YP_003206889.1 392375056 13097256 1732409..1733176 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1733176 13097256 DAMO_2008 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206889.1 1732409 D 671143 CDS YP_003206890.1 392375057 13097257 1733173..1735020 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1735020 13097257 DAMO_2009 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206890.1 1733173 D 671143 CDS YP_003206891.1 392375058 13097258 1735017..1735832 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1735832 13097258 DAMO_2010 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206891.1 1735017 D 671143 CDS YP_003206892.1 392375059 13097259 complement(1736018..1736500) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1736500 13097259 DAMO_2011 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206892.1 1736018 R 671143 CDS YP_003206893.1 392375060 13097260 1736678..1738132 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1738132 13097260 DAMO_2012 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206893.1 1736678 D 671143 CDS YP_003206894.1 392375061 13097261 complement(1738101..1738220) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1738220 13097261 DAMO_2013 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206894.1 1738101 R 671143 CDS YP_003206895.1 392375062 13099760 1738391..1738681 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1738681 13099760 DAMO_2014 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206895.1 1738391 D 671143 CDS YP_003206896.1 392375063 13097262 1738747..1738998 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1738998 13097262 DAMO_2015 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206896.1 1738747 D 671143 CDS YP_003206897.1 392375064 13097263 1738991..1739353 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1739353 13097263 DAMO_2016 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206897.1 1738991 D 671143 CDS YP_003206898.1 392375065 13097264 1739322..1739999 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1739999 13097264 DAMO_2017 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206898.1 1739322 D 671143 CDS YP_003206899.1 392375066 13097265 1740198..1740347 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1740347 13097265 DAMO_2018 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206899.1 1740198 D 671143 CDS YP_003206900.1 392375067 13097266 complement(1740379..1741284) 1 NC_013260.1 transposase 1741284 13097266 DAMO_2019 Candidatus Methylomirabilis oxyfera transposase YP_003206900.1 1740379 R 671143 CDS YP_003206901.1 392375068 13097267 complement(1741311..1741589) 1 NC_013260.1 insertion element ISR1 protein A3 1741589 13097267 DAMO_2020 Candidatus Methylomirabilis oxyfera insertion element ISR1 protein A3 YP_003206901.1 1741311 R 671143 CDS YP_003206902.1 392375069 13097268 1741661..1741843 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1741843 13097268 DAMO_2021 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206902.1 1741661 D 671143 CDS YP_003206903.1 392375070 13097269 1741764..1741928 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1741928 13097269 DAMO_2022 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206903.1 1741764 D 671143 CDS YP_003206904.1 392375071 13097270 complement(1742047..1742133) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1742133 13097270 DAMO_2023 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206904.1 1742047 R 671143 CDS YP_003206905.1 392375072 13097271 1742233..1742496 1 NC_013260.1 Helix-turn-helix protein, CopG 1742496 13097271 DAMO_2024 Candidatus Methylomirabilis oxyfera Helix-turn-helix protein, CopG YP_003206905.1 1742233 D 671143 CDS YP_003206906.1 392375073 13097272 complement(1742430..1742888) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1742888 13097272 DAMO_2025 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206906.1 1742430 R 671143 CDS YP_003206907.1 392375074 13097273 1742493..1742771 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1742771 13097273 DAMO_2026 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206907.1 1742493 D 671143 CDS YP_003206908.1 392375075 13097274 complement(1742891..1743088) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1743088 13097274 DAMO_2027 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206908.1 1742891 R 671143 CDS YP_003206909.1 392375076 13097275 1743233..1744033 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1744033 13097275 DAMO_2028 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206909.1 1743233 D 671143 CDS YP_003206910.1 392375077 13097276 1744030..1745040 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1745040 13097276 DAMO_2029 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206910.1 1744030 D 671143 CDS YP_003206911.1 392375078 13097277 complement(1745585..1745929) 1 NC_013260.1 XRE family transcriptional regulator 1745929 13097277 DAMO_2030 Candidatus Methylomirabilis oxyfera XRE family transcriptional regulator YP_003206911.1 1745585 R 671143 CDS YP_003206912.1 392375079 13097278 complement(1746466..1748097) 1 NC_013260.1 AMP-dependent synthetase and ligase 1748097 13097278 DAMO_2031 Candidatus Methylomirabilis oxyfera AMP-dependent synthetase and ligase YP_003206912.1 1746466 R 671143 CDS YP_003206913.1 392375080 13097279 complement(1748094..1749470) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Coproporphyrinogen dehydrogenase 1749470 13097279 DAMO_2032 Candidatus Methylomirabilis oxyfera Coproporphyrinogen dehydrogenase YP_003206913.1 1748094 R 671143 CDS YP_003206914.1 392375081 13097280 complement(1749580..1750662) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1750662 13097280 DAMO_2033 Candidatus Methylomirabilis oxyfera membrane protein YP_003206914.1 1749580 R 671143 CDS YP_003206915.1 392375082 13097281 complement(1750667..1750807) 1 NC_013260.1 hypothetical protein 1750807 13097281 DAMO_2034 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206915.1 1750667 R 671143 CDS YP_003206916.1 392375083 13097282 complement(1750892..1751377) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1751377 13097282 DAMO_2035 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206916.1 1750892 R 671143 CDS YP_003206917.1 392375084 13097283 complement(1751405..1752178) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1752178 13097283 DAMO_2036 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206917.1 1751405 R 671143 CDS YP_003206918.1 392375085 13097284 complement(1752181..1752588) 1 NC_013260.1 ComA operon protein 2 1752588 yuxO 13097284 yuxO Candidatus Methylomirabilis oxyfera ComA operon protein 2 YP_003206918.1 1752181 R 671143 CDS YP_003206919.1 392375086 13097285 complement(1752624..1753817) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 1753817 13097285 DAMO_2038 Candidatus Methylomirabilis oxyfera membrane protein YP_003206919.1 1752624 R 671143 CDS YP_003206920.1 392375087 13097286 complement(1753807..1754556) 1 NC_013260.1 ABC transporter permease 1754556 13097286 DAMO_2039 Candidatus Methylomirabilis oxyfera ABC transporter permease YP_003206920.1 1753807 R 671143 CDS YP_003206921.1 392375088 13097287 complement(1754553..1755320) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1755320 13097287 DAMO_2040 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206921.1 1754553 R 671143 CDS YP_003206922.1 392375089 13097288 complement(1755345..1756418) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; ABC transporter substrate-binding protein 1756418 13097288 DAMO_2041 Candidatus Methylomirabilis oxyfera ABC transporter substrate-binding protein YP_003206922.1 1755345 R 671143 CDS YP_003206923.1 392375090 13097289 complement(1756448..1756630) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1756630 13097289 DAMO_2042 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206923.1 1756448 R 671143 CDS YP_003206925.1 392375092 13097291 complement(1756984..1760793) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1760793 13097291 DAMO_2044 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206925.1 1756984 R 671143 CDS YP_003206926.1 392375093 13097292 complement(1761009..1763081) 1 NC_013260.1 UvrD/REP helicase 1763081 13097292 DAMO_2045 Candidatus Methylomirabilis oxyfera UvrD/REP helicase YP_003206926.1 1761009 R 671143 CDS YP_003206927.1 392375094 13098912 complement(1763116..1766208) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1766208 13098912 DAMO_2046 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206927.1 1763116 R 671143 CDS YP_003206928.1 392375095 13097293 complement(1766269..1769091) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; DNA methylase 1769091 13097293 DAMO_2047 Candidatus Methylomirabilis oxyfera DNA methylase YP_003206928.1 1766269 R 671143 CDS YP_003206929.1 392375096 13097294 complement(1769260..1769673) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1769673 13097294 DAMO_2048 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206929.1 1769260 R 671143 CDS YP_003206930.1 392375097 13097295 complement(1769670..1772747) 1 NC_013260.1 type III restriction enzyme, res subunit 1772747 13097295 DAMO_2049 Candidatus Methylomirabilis oxyfera type III restriction enzyme, res subunit YP_003206930.1 1769670 R 671143 CDS YP_003206931.1 392375098 13097296 1772740..1773042 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1773042 13097296 DAMO_2050 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206931.1 1772740 D 671143 CDS YP_003206932.1 392375099 13097297 complement(1773248..1773436) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1773436 13097297 DAMO_2051 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206932.1 1773248 R 671143 CDS YP_003206933.1 392375100 13097298 complement(1773384..1774268) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1774268 13097298 DAMO_2052 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206933.1 1773384 R 671143 CDS YP_003206934.1 392375101 13097299 complement(1774448..1775179) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1775179 13097299 DAMO_2053 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206934.1 1774448 R 671143 CDS YP_003206935.1 392375102 13097300 1775696..1776451 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1776451 13097300 DAMO_2054 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206935.1 1775696 D 671143 CDS YP_003206936.1 392375103 13097301 1776557..1776952 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1776952 13097301 DAMO_2055 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206936.1 1776557 D 671143 CDS YP_003206937.1 392375104 13097302 1776960..1778675 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; recombinase 1778675 13097302 DAMO_2056 Candidatus Methylomirabilis oxyfera recombinase YP_003206937.1 1776960 D 671143 CDS YP_003206938.1 392375105 13097304 complement(1778717..1779835) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; pyruvate formate lyase activating enzyme 2 (yfgB) 1779835 13097304 DAMO_2057 Candidatus Methylomirabilis oxyfera pyruvate formate lyase activating enzyme 2 (yfgB) YP_003206938.1 1778717 R 671143 CDS YP_003206939.1 392375106 13097305 complement(1779979..1780728) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1780728 13097305 DAMO_2058 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206939.1 1779979 R 671143 CDS YP_003206940.1 392375107 13097306 complement(1780728..1781744) 1 NC_013260.1 aminodeoxychorismate lyase 1781744 13097306 DAMO_2059 Candidatus Methylomirabilis oxyfera aminodeoxychorismate lyase YP_003206940.1 1780728 R 671143 CDS YP_003206941.1 392375108 13097307 complement(1781741..1782175) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Holliday junction resolvase 1782175 13097307 DAMO_2060 Candidatus Methylomirabilis oxyfera Holliday junction resolvase YP_003206941.1 1781741 R 671143 CDS YP_003206942.1 392375109 13097308 1782229..1782915 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1782915 13097308 DAMO_2061 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206942.1 1782229 D 671143 CDS YP_003206943.1 392375110 13097309 complement(1782889..1784745) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; threonine synthase (TS) 1784745 13097309 DAMO_2062 Candidatus Methylomirabilis oxyfera threonine synthase (TS) YP_003206943.1 1782889 R 671143 CDS YP_003206944.1 392375111 13097310 complement(1784843..1785256) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1785256 13097310 DAMO_2063 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206944.1 1784843 R 671143 CDS YP_003206945.1 392375112 13097311 complement(1785235..1785930) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; peptidase, S54 (Rhomboid) family 1785930 13097311 DAMO_2064 Candidatus Methylomirabilis oxyfera peptidase, S54 (Rhomboid) family YP_003206945.1 1785235 R 671143 CDS YP_003206946.1 392375113 13099860 complement(1785974..1786636) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1860862; Product type e : enzyme; protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) 1786636 pcm 13099860 pcm Candidatus Methylomirabilis oxyfera protein-L-isoaspartate O-methyltransferase (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) YP_003206946.1 1785974 R 671143 CDS YP_003206947.1 392375114 13097312 complement(1786890..1787750) 1 NC_013260.1 RNA polymerase sigma factor RpoS 1787750 rpoS 13097312 rpoS Candidatus Methylomirabilis oxyfera RNA polymerase sigma factor RpoS YP_003206947.1 1786890 R 671143 CDS YP_003206948.1 392375115 13097313 complement(1787833..1788663) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1788663 13097313 DAMO_2067 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206948.1 1787833 R 671143 CDS YP_003206949.1 392375116 13097314 complement(1788671..1789072) 1 NC_013260.1 thioesterase superfamily protein 1789072 13097314 DAMO_2068 Candidatus Methylomirabilis oxyfera thioesterase superfamily protein YP_003206949.1 1788671 R 671143 CDS YP_003206950.1 392375117 13097315 complement(1789144..1789365) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1789365 13097315 DAMO_2069 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206950.1 1789144 R 671143 CDS YP_003206951.1 392375118 13097317 complement(1789325..1789564) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1789564 13097317 DAMO_2070 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206951.1 1789325 R 671143 CDS YP_003206952.1 392375119 13097318 complement(1789561..1790283) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1790283 13097318 DAMO_2071 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206952.1 1789561 R 671143 CDS YP_003206953.1 392375120 13097319 complement(1790512..1794651) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1794651 13097319 DAMO_2072 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206953.1 1790512 R 671143 CDS YP_003206954.1 392375121 13098636 complement(1794744..1795586) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Caspase-1, p20 1795586 13098636 DAMO_2073 Candidatus Methylomirabilis oxyfera Caspase-1, p20 YP_003206954.1 1794744 R 671143 CDS YP_003206955.1 392375122 13098774 1795816..1796433 1 NC_013260.1 peptide methionine sulfoxide reductase msrB (Peptide-methionine (R)-S-oxide reductase) 1796433 13098774 DAMO_2074 Candidatus Methylomirabilis oxyfera peptide methionine sulfoxide reductase msrB (Peptide-methionine (R)-S-oxide reductase) YP_003206955.1 1795816 D 671143 CDS YP_003206956.1 392375123 13097320 complement(1796470..1796865) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1796865 13097320 DAMO_2075 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206956.1 1796470 R 671143 CDS YP_003206957.1 392375124 13097321 complement(1796944..1797282) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1797282 13097321 DAMO_2076 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206957.1 1796944 R 671143 CDS YP_003206958.1 392375125 13097322 complement(1797407..1798183) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15447632; Product type e : enzyme; Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) 1798183 ispU 13097322 ispU Candidatus Methylomirabilis oxyfera Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2) (Di-trans,poly-cis-decaprenylcistransferase 2) (Undecaprenyl diphosphate synthase 2) (UDS 2) YP_003206958.1 1797407 R 671143 CDS YP_003206959.1 392375126 13099761 complement(1798319..1799407) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1799407 13099761 DAMO_2078 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206959.1 1798319 R 671143 CDS YP_003206960.1 392375127 13097323 complement(1799541..1800479) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1800479 13097323 DAMO_2079 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206960.1 1799541 R 671143 CDS YP_003206961.1 392375128 13097324 complement(1800550..1801383) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 89213950, 91072220, 92269759; Product type t : transporter; iron-dicitrate transporter subunit ATP-binding component of ABC superfamily; KpLE2 phage-like element 1801383 fecE 13097324 fecE Candidatus Methylomirabilis oxyfera iron-dicitrate transporter subunit ATP-binding component of ABC superfamily; KpLE2 phage-like element YP_003206961.1 1800550 R 671143 CDS YP_003206962.1 392375129 13097325 complement(1801380..1802444) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 89213950, 91072220, 92269759; Product type t : transporter; iron-dicitrate transporter subunit membrane component of ABC superfamily; KpLE2 phage-like element 1802444 fecD 13097325 fecD Candidatus Methylomirabilis oxyfera iron-dicitrate transporter subunit membrane component of ABC superfamily; KpLE2 phage-like element YP_003206962.1 1801380 R 671143 CDS YP_003206963.1 392375130 13097326 complement(1802441..1803337) 1 NC_013260.1 periplasmic binding protein 1803337 13097326 DAMO_2082 Candidatus Methylomirabilis oxyfera periplasmic binding protein YP_003206963.1 1802441 R 671143 CDS YP_003206964.1 392375131 13097327 complement(1803334..1805343) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; TonB-dependent outer membrane receptor for cobalamin and Fe transport 1805343 13097327 DAMO_2083 Candidatus Methylomirabilis oxyfera TonB-dependent outer membrane receptor for cobalamin and Fe transport YP_003206964.1 1803334 R 671143 CDS YP_003206965.1 392375132 13097328 complement(1805240..1805443) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1805443 13097328 DAMO_2084 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206965.1 1805240 R 671143 CDS YP_003206966.1 392375133 13097329 1805531..1805779 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1805779 13097329 DAMO_2085 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206966.1 1805531 D 671143 CDS YP_003206967.1 392375134 13098479 complement(1805783..1806604) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; cobalamin synthase 1806604 13098479 DAMO_2086 Candidatus Methylomirabilis oxyfera cobalamin synthase YP_003206967.1 1805783 R 671143 CDS YP_003206968.1 392375135 13097330 complement(1806594..1807652) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12196148, 8206834; Product type e : enzyme; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (anaerobic pathway of cobalamin biosynthesis, cobT) 1807652 13097330 DAMO_2087 Candidatus Methylomirabilis oxyfera nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (anaerobic pathway of cobalamin biosynthesis, cobT) YP_003206968.1 1806594 R 671143 CDS YP_003206969.1 392375136 13097331 complement(1807649..1808212) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12195810, 1655696, 7559521, 9601028; Product type e : enzyme; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1808212 cobU 13097331 cobU Candidatus Methylomirabilis oxyfera adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase YP_003206969.1 1807649 R 671143 CDS YP_003206970.1 392375137 13100193 complement(1808202..1809047) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Xylose isomerase domain protein TIM barrel 1809047 13100193 DAMO_2089 Candidatus Methylomirabilis oxyfera Xylose isomerase domain protein TIM barrel YP_003206970.1 1808202 R 671143 CDS YP_003206971.1 392375138 13100192 complement(1809034..1809801) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Cob(II)yrinic acid a,c-diamide reductase, bluB 1809801 13100192 DAMO_2090 Candidatus Methylomirabilis oxyfera Cob(II)yrinic acid a,c-diamide reductase, bluB YP_003206971.1 1809034 R 671143 CDS YP_003206972.1 392375139 13097332 complement(1809845..1809931) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1809931 13097332 DAMO_2091 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206972.1 1809845 R 671143 CDS YP_003206973.1 392375140 13097333 1810015..1810257 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1810257 13097333 DAMO_2092 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206973.1 1810015 D 671143 CDS YP_003206974.1 392375141 13097334 complement(1810397..1810642) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; histone H1 protein 1810642 13097334 DAMO_2093 Candidatus Methylomirabilis oxyfera histone H1 protein YP_003206974.1 1810397 R 671143 CDS YP_003206975.1 392375142 13097335 complement(1810699..1810935) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1810935 13097335 DAMO_2094 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206975.1 1810699 R 671143 CDS YP_003206976.1 392375143 13097336 complement(1811174..1813189) 1 NC_013260.1 Multimodular transpeptidase-transglycosylase 1813189 13097336 DAMO_2095 Candidatus Methylomirabilis oxyfera Multimodular transpeptidase-transglycosylase YP_003206976.1 1811174 R 671143 CDS YP_003206977.1 392375144 13097337 1813433..1813693 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1813693 13097337 DAMO_2096 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206977.1 1813433 D 671143 CDS YP_003206978.1 392375145 13100055 complement(1813702..1814469) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein 1814469 13100055 DAMO_2097 Candidatus Methylomirabilis oxyfera lipoprotein YP_003206978.1 1813702 R 671143 CDS YP_003206979.1 392375146 13097338 complement(1814675..1815643) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 7602590; Product type e : enzyme; quinone oxidoreductase 1815643 qor 13097338 qor Candidatus Methylomirabilis oxyfera quinone oxidoreductase YP_003206979.1 1814675 R 671143 CDS YP_003206980.1 392375147 13097339 1815882..1816235 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1816235 13097339 DAMO_2099 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206980.1 1815882 D 671143 CDS YP_003206981.1 392375148 13097340 complement(1815972..1816211) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1816211 13097340 DAMO_2100 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206981.1 1815972 R 671143 CDS YP_003206982.1 392375149 13097341 complement(1816171..1816362) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1816362 13097341 DAMO_2101 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206982.1 1816171 R 671143 CDS YP_003206983.1 392375150 13097342 complement(1816266..1816961) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1816961 13097342 DAMO_2102 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206983.1 1816266 R 671143 CDS YP_003206984.1 392375151 13097343 complement(1817035..1818567) 1 NC_013260.1 ribonuclease G (Cytoplasmic axial filament protein) 1818567 rng 13097343 rng Candidatus Methylomirabilis oxyfera ribonuclease G (Cytoplasmic axial filament protein) YP_003206984.1 1817035 R 671143 CDS YP_003206985.1 392375152 13097344 complement(1818564..1821167) 1 NC_013260.1 radical SAM protein 1821167 13097344 DAMO_2104 Candidatus Methylomirabilis oxyfera radical SAM protein YP_003206985.1 1818564 R 671143 CDS YP_003206986.1 392375153 13097345 complement(1821311..1822024) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1822024 13097345 DAMO_2105 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206986.1 1821311 R 671143 CDS YP_003206987.1 392375154 13097346 complement(1822258..1822377) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1822377 13097346 DAMO_2106 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206987.1 1822258 R 671143 CDS YP_003206988.1 392375155 13098706 complement(1822385..1822759) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; response regulator in two-component regulatory system (CheY-like protein) 1822759 13098706 DAMO_2107 Candidatus Methylomirabilis oxyfera response regulator in two-component regulatory system (CheY-like protein) YP_003206988.1 1822385 R 671143 CDS YP_003206989.1 392375156 13097347 complement(1822753..1824948) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1824948 13097347 DAMO_2108 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003206989.1 1822753 R 671143 CDS YP_003206990.1 392375157 13097348 complement(1825072..1825215) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1825215 13097348 DAMO_2109 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206990.1 1825072 R 671143 CDS YP_003206991.1 392375158 13097349 complement(1825239..1825721) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1825721 13097349 DAMO_2110 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206991.1 1825239 R 671143 CDS YP_003206992.1 392375159 13097350 1825692..1826087 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1826087 13097350 DAMO_2111 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206992.1 1825692 D 671143 CDS YP_003206993.1 392375160 13098736 complement(1825761..1826012) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1826012 13098736 DAMO_2112 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206993.1 1825761 R 671143 CDS YP_003206994.1 392375161 13097351 complement(1826169..1826300) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1826300 13097351 DAMO_2113 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206994.1 1826169 R 671143 CDS YP_003206995.1 392375162 13097352 1826458..1826964 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9304784; Product type e : enzyme; inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (PPase) 1826964 ppa 13097352 ppa Candidatus Methylomirabilis oxyfera inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (PPase) YP_003206995.1 1826458 D 671143 CDS YP_003206996.1 392375163 13097353 1826933..1828144 1 NC_013260.1 Major facilitator family transporter 1828144 13097353 DAMO_2115 Candidatus Methylomirabilis oxyfera Major facilitator family transporter YP_003206996.1 1826933 D 671143 CDS YP_003206997.1 392375164 13097354 complement(1828232..1829149) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; phosphoribulokinase 1829149 cbbP 13097354 cbbP Candidatus Methylomirabilis oxyfera phosphoribulokinase YP_003206997.1 1828232 R 671143 CDS YP_003206998.1 392375165 13097355 1829391..1829531 1 NC_013260.1 hypothetical protein 1829531 13097355 DAMO_2117 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206998.1 1829391 D 671143 CDS YP_003206999.1 392375166 13097356 complement(1829481..1829945) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1829945 13097356 DAMO_2118 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003206999.1 1829481 R 671143 CDS YP_003207000.1 392375167 13097357 complement(1830086..1830298) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1830298 13097357 DAMO_2119 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207000.1 1830086 R 671143 CDS YP_003207001.1 392375168 13097358 1830571..1833129 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 1833129 13097358 DAMO_2120 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003207001.1 1830571 D 671143 CDS YP_003207002.1 392375169 13097359 complement(1833178..1835631) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Oxygen-independent coproporphyrinogen III oxidase 1835631 13097359 DAMO_2121 Candidatus Methylomirabilis oxyfera Oxygen-independent coproporphyrinogen III oxidase YP_003207002.1 1833178 R 671143 CDS YP_003207003.1 392375170 13097360 complement(1836064..1836903) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1836903 13097360 DAMO_2122 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207003.1 1836064 R 671143 CDS YP_003207004.1 392375171 13098671 complement(1837074..1837253) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1837253 13098671 DAMO_2123 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207004.1 1837074 R 671143 CDS YP_003207005.1 392375172 13097361 1837338..1837619 1 NC_013260.1 30S ribosomal protein S21 1837619 rpsU 13097361 rpsU Candidatus Methylomirabilis oxyfera 30S ribosomal protein S21 YP_003207005.1 1837338 D 671143 CDS YP_003207006.1 392375173 13100031 1837653..1838075 1 NC_013260.1 RNP-1 like RNA-binding protein 1838075 13100031 DAMO_2125 Candidatus Methylomirabilis oxyfera RNP-1 like RNA-binding protein YP_003207006.1 1837653 D 671143 CDS YP_003207007.1 392375174 13097362 1837969..1838079 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1838079 13097362 DAMO_2126 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207007.1 1837969 D 671143 CDS YP_003207008.1 392375175 13097363 complement(1838162..1839298) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1839298 13097363 DAMO_2127 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207008.1 1838162 R 671143 CDS YP_003207009.1 392375176 13097364 complement(1839326..1840225) 1 NC_013260.1 L-asparaginase (Asparaginase-like protein 1) 1840225 asrgl 13097364 asrgl Candidatus Methylomirabilis oxyfera L-asparaginase (Asparaginase-like protein 1) YP_003207009.1 1839326 R 671143 CDS YP_003207010.1 392375177 13097365 complement(1840230..1841498) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; metalloprotease 1841498 13097365 DAMO_2129 Candidatus Methylomirabilis oxyfera metalloprotease YP_003207010.1 1840230 R 671143 CDS YP_003207011.1 392375178 13097366 complement(1841530..1842015) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1842015 13097366 DAMO_2130 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207011.1 1841530 R 671143 CDS YP_003207012.1 392375179 13097367 complement(1842247..1843377) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter permease 1843377 13097367 DAMO_2131 Candidatus Methylomirabilis oxyfera ABC transporter permease YP_003207012.1 1842247 R 671143 CDS YP_003207013.1 392375180 13097368 complement(1843374..1844366) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter ATP-binding protein 1844366 13097368 DAMO_2132 Candidatus Methylomirabilis oxyfera ABC transporter ATP-binding protein YP_003207013.1 1843374 R 671143 CDS YP_003207014.1 392375181 13098792 complement(1844359..1845414) 1 NC_013260.1 Secretion protein HlyD 1845414 13098792 DAMO_2133 Candidatus Methylomirabilis oxyfera Secretion protein HlyD YP_003207014.1 1844359 R 671143 CDS YP_003207015.1 392375182 13097369 complement(1845443..1847497) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1526462; Product type e : enzyme; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) 1847497 ligA 13097369 ligA Candidatus Methylomirabilis oxyfera DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) YP_003207015.1 1845443 R 671143 CDS YP_003207016.1 392375183 13097370 1847680..1847937 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1847937 13097370 DAMO_2135 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207016.1 1847680 D 671143 CDS YP_003207017.1 392375184 13097371 1848114..1848395 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1848395 13097371 DAMO_2136 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207017.1 1848114 D 671143 CDS YP_003207018.1 392375185 13099925 1848705..1849283 1 NC_013260.1 bifunctional pyrimidine operon regulatory protein/uracil phosphoribosyltransferase 1849283 pyrR 13099925 pyrR Candidatus Methylomirabilis oxyfera bifunctional pyrimidine operon regulatory protein/uracil phosphoribosyltransferase YP_003207018.1 1848705 D 671143 CDS YP_003207019.1 392375186 13097372 1849295..1850224 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10318893, 2271528; Product type e : enzyme; aspartate carbamoyltransferase (catalytic subunit) 1850224 pyrB 13097372 pyrB Candidatus Methylomirabilis oxyfera aspartate carbamoyltransferase (catalytic subunit) YP_003207019.1 1849295 D 671143 CDS YP_003207020.1 392375187 13097373 1850244..1851584 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; dihydroorotase 1851584 pyrC 13097373 pyrC Candidatus Methylomirabilis oxyfera dihydroorotase YP_003207020.1 1850244 D 671143 CDS YP_003207021.1 392375188 13097374 1851598..1852797 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit 1852797 carA 13097374 carA Candidatus Methylomirabilis oxyfera carbamoyl phosphate synthetase, glutamine amidotransferase small subunit YP_003207021.1 1851598 D 671143 CDS YP_003207022.1 392375189 13097375 1852794..1853453 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; O-methyltransferase mdmC 1853453 13097375 DAMO_2141 Candidatus Methylomirabilis oxyfera O-methyltransferase mdmC YP_003207022.1 1852794 D 671143 CDS YP_003207023.1 392375190 13097376 1853454..1856753 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; carbamoyl phosphate synthase, large subunit 1856753 carB 13097376 carB Candidatus Methylomirabilis oxyfera carbamoyl phosphate synthase, large subunit YP_003207023.1 1853454 D 671143 CDS YP_003207024.1 392375191 13098506 1856773..1857753 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Dihydroorotate dehydrogenase, electron transfer subunit 1857753 13098506 DAMO_2143 Candidatus Methylomirabilis oxyfera Dihydroorotate dehydrogenase, electron transfer subunit YP_003207024.1 1856773 D 671143 CDS YP_003207025.1 392375192 13097377 1857750..1859216 1 NC_013260.1 aminodeoxychorismate synthase, subunit I 1859216 13097377 DAMO_2144 Candidatus Methylomirabilis oxyfera aminodeoxychorismate synthase, subunit I YP_003207025.1 1857750 D 671143 CDS YP_003207026.1 392375193 13097378 1859226..1860122 1 NC_013260.1 Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase 1860122 13097378 DAMO_2145 Candidatus Methylomirabilis oxyfera Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / branched chain amino acid aminotransferase YP_003207026.1 1859226 D 671143 CDS YP_003207027.1 392375194 13098705 1860119..1861066 1 NC_013260.1 dihydroorotate dehydrogenase (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) 1861066 pyrD 13098705 pyrD Candidatus Methylomirabilis oxyfera dihydroorotate dehydrogenase (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) YP_003207027.1 1860119 D 671143 CDS YP_003207028.1 392375195 13098697 1861054..1861728 1 NC_013260.1 endonuclease III 1861728 nth 13098697 nth Candidatus Methylomirabilis oxyfera endonuclease III YP_003207028.1 1861054 D 671143 CDS YP_003207029.1 392375196 13098698 1861827..1862348 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1862348 13098698 DAMO_2148 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207029.1 1861827 D 671143 CDS YP_003207030.1 392375197 13100019 complement(1862365..1862691) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1862691 13100019 DAMO_2149 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207030.1 1862365 R 671143 CDS YP_003207031.1 392375198 13097379 1862692..1862883 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1862883 13097379 DAMO_2150 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207031.1 1862692 D 671143 CDS YP_003207032.1 392375199 13100020 complement(1862875..1863063) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1863063 13100020 DAMO_2151 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207032.1 1862875 R 671143 CDS YP_003207033.1 392375200 13097380 1863170..1864207 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Curli production assembly/transport component CsgG 1864207 13097380 DAMO_2152 Candidatus Methylomirabilis oxyfera Curli production assembly/transport component CsgG YP_003207033.1 1863170 D 671143 CDS YP_003207034.1 392375201 13097381 complement(1864165..1864785) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1864785 13097381 DAMO_2153 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207034.1 1864165 R 671143 CDS YP_003207035.1 392375202 13097382 1864249..1864596 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1864596 13097382 DAMO_2154 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207035.1 1864249 D 671143 CDS YP_003207036.1 392375203 13098699 1864624..1865553 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1865553 13098699 DAMO_2155 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207036.1 1864624 D 671143 CDS YP_003207037.1 392375204 13098604 1865653..1865865 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1865865 13098604 DAMO_2156 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207037.1 1865653 D 671143 CDS YP_003207038.1 392375205 13097383 1866042..1866320 1 NC_013260.1 hypothetical protein 1866320 13097383 DAMO_2157 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207038.1 1866042 D 671143 CDS YP_003207039.1 392375206 13097384 1866323..1866592 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1866592 13097384 DAMO_2158 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207039.1 1866323 D 671143 CDS YP_003207040.1 392375207 13097385 1866577..1866759 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1866759 13097385 DAMO_2159 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207040.1 1866577 D 671143 CDS YP_003207041.1 392375208 13097386 1866831..1868114 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1868114 13097386 DAMO_2160 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207041.1 1866831 D 671143 CDS YP_003207042.1 392375209 13097387 1868191..1868481 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1868481 13097387 DAMO_2161 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207042.1 1868191 D 671143 CDS YP_003207043.1 392375210 13097388 complement(1868224..1868472) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1868472 13097388 DAMO_2162 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207043.1 1868224 R 671143 CDS YP_003207044.1 392375211 13097389 complement(1868541..1869560) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; D-fructose-1,6-bisphosphatase protein 1869560 cbbF 13097389 cbbF Candidatus Methylomirabilis oxyfera D-fructose-1,6-bisphosphatase protein YP_003207044.1 1868541 R 671143 CDS YP_003207045.1 392375212 13097390 complement(1869557..1870216) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI) 1870216 rpiA 13097390 rpiA Candidatus Methylomirabilis oxyfera ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI) YP_003207045.1 1869557 R 671143 CDS YP_003207046.1 392375213 13097391 1870669..1872132 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) 1872132 cbbL 13097391 cbbL Candidatus Methylomirabilis oxyfera ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) YP_003207046.1 1870669 D 671143 CDS YP_003207047.1 392375214 13097392 1872152..1872574 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) 1872574 cbbS 13097392 cbbS Candidatus Methylomirabilis oxyfera ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) YP_003207047.1 1872152 D 671143 CDS YP_003207048.1 392375215 13097393 1872728..1873690 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 9006018; Product type pr : putative regulator; CbbX-like protein, containing AAA-ATPase domain 1873690 13097393 DAMO_2167 Candidatus Methylomirabilis oxyfera CbbX-like protein, containing AAA-ATPase domain YP_003207048.1 1872728 D 671143 CDS YP_003207049.1 392375216 13097394 1873695..1875191 1 NC_013260.1 phosphoenolpyruvate carboxylase (PEPC) 1875191 ppcA 13097394 ppcA Candidatus Methylomirabilis oxyfera phosphoenolpyruvate carboxylase (PEPC) YP_003207049.1 1873695 D 671143 CDS YP_003207050.1 392375217 13097395 1874992..1875231 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1875231 13097395 DAMO_2169 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207050.1 1874992 D 671143 CDS YP_003207051.1 392375218 13097396 1875228..1875857 1 NC_013260.1 carbonic anhydrase 1875857 cynT 13097396 cynT Candidatus Methylomirabilis oxyfera carbonic anhydrase YP_003207051.1 1875228 D 671143 CDS YP_003207052.1 392375219 13097397 1875972..1876241 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1876241 13097397 DAMO_2171 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207052.1 1875972 D 671143 CDS YP_003207053.1 392375220 13100024 complement(1876262..1876603) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1876603 13100024 DAMO_2172 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207053.1 1876262 R 671143 CDS YP_003207054.1 392375221 13098742 complement(1876575..1876832) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1876832 13098742 DAMO_2173 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207054.1 1876575 R 671143 CDS YP_003207055.1 392375222 13100030 complement(1876942..1877043) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1877043 13100030 DAMO_2174 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207055.1 1876942 R 671143 CDS YP_003207056.1 392375223 13100032 complement(1877063..1877437) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1877437 13100032 DAMO_2175 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207056.1 1877063 R 671143 CDS YP_003207057.1 392375224 13097398 complement(1877602..1877793) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1877793 13097398 DAMO_2176 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207057.1 1877602 R 671143 CDS YP_003207058.1 392375225 13098672 1877623..1878801 1 NC_013260.1 alanine racemase 1878801 alr 13098672 alr Candidatus Methylomirabilis oxyfera alanine racemase YP_003207058.1 1877623 D 671143 CDS YP_003207059.1 392375226 13100066 1878959..1880254 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Trigger factor (TF) 1880254 13100066 DAMO_2178 Candidatus Methylomirabilis oxyfera Trigger factor (TF) YP_003207059.1 1878959 D 671143 CDS YP_003207060.1 392375227 13097400 1880281..1880898 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12213919; Product type e : enzyme; ATP-dependent Clp protease proteolytic subunit 1880898 clpP 13097400 clpP Candidatus Methylomirabilis oxyfera ATP-dependent Clp protease proteolytic subunit YP_003207060.1 1880281 D 671143 CDS YP_003207061.1 392375228 13097401 complement(1881003..1881479) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1881479 13097401 DAMO_2180 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207061.1 1881003 R 671143 CDS YP_003207062.1 392375229 13097402 1881099..1882346 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10322004, 9575205; Product type e : enzyme; ATP-dependent Clp protease ATP-binding subunit clpX 1882346 clpX 13097402 clpX Candidatus Methylomirabilis oxyfera ATP-dependent Clp protease ATP-binding subunit clpX YP_003207062.1 1881099 D 671143 CDS YP_003207063.1 392375230 13097403 1882501..1883415 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Tetratricopeptide TPR_2 1883415 13097403 DAMO_2182 Candidatus Methylomirabilis oxyfera Tetratricopeptide TPR_2 YP_003207063.1 1882501 D 671143 CDS YP_003207064.1 392375231 13097404 1883501..1884439 1 NC_013260.1 dimethyladenosine transferase (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) 1884439 ksgA 13097404 ksgA Candidatus Methylomirabilis oxyfera dimethyladenosine transferase (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) YP_003207064.1 1883501 D 671143 CDS YP_003207065.1 392375232 13097405 1884470..1885507 1 NC_013260.1 thiamine-monophosphate kinase 1885507 13097405 DAMO_2184 Candidatus Methylomirabilis oxyfera thiamine-monophosphate kinase YP_003207065.1 1884470 D 671143 CDS YP_003207066.1 392375233 13099900 1885617..1886060 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1886060 13099900 DAMO_2185 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207066.1 1885617 D 671143 CDS YP_003207067.1 392375234 13099762 complement(1886066..1887346) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2841284; Product type e : enzyme; enolase 1887346 eno 13099762 eno Candidatus Methylomirabilis oxyfera enolase YP_003207067.1 1886066 R 671143 CDS YP_003207068.1 392375235 13097406 complement(1887343..1888608) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; glutamate dehydrogenase 1888608 gdh 13097406 gdh Candidatus Methylomirabilis oxyfera glutamate dehydrogenase YP_003207068.1 1887343 R 671143 CDS YP_003207069.1 392375236 13100048 1889070..1889402 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1889402 13100048 DAMO_2188 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207069.1 1889070 D 671143 CDS YP_003207070.1 392375237 13097407 complement(1889091..1889456) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1889456 13097407 DAMO_2189 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207070.1 1889091 R 671143 CDS YP_003207071.1 392375238 13100049 1889412..1889711 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1889711 13100049 DAMO_2190 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207071.1 1889412 D 671143 CDS YP_003207072.1 392375239 13097408 complement(1890084..1890188) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1890188 13097408 DAMO_2191 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207072.1 1890084 R 671143 CDS YP_003207073.1 392375240 13098496 complement(1890297..1890620) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1890620 13098496 DAMO_2192 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207073.1 1890297 R 671143 CDS YP_003207074.1 392375241 13097409 1890303..1890596 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1890596 13097409 DAMO_2193 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207074.1 1890303 D 671143 CDS YP_003207075.1 392375242 13097410 1890612..1890917 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1890917 13097410 DAMO_2194 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207075.1 1890612 D 671143 CDS YP_003207076.1 392375243 13100177 1891242..1891397 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1891397 13100177 DAMO_2195 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207076.1 1891242 D 671143 CDS YP_003207077.1 392375244 13100243 1891630..1891866 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1891866 13100243 DAMO_2196 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207077.1 1891630 D 671143 CDS YP_003207078.1 392375245 13097411 1892196..1892777 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1892777 13097411 DAMO_2197 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207078.1 1892196 D 671143 CDS YP_003207079.1 392375246 13097412 1892925..1893218 1 NC_013260.1 hypothetical protein 1893218 13097412 DAMO_2198 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207079.1 1892925 D 671143 CDS YP_003207080.1 392375247 13097413 1893277..1893477 1 NC_013260.1 hypothetical protein 1893477 13097413 DAMO_2199 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207080.1 1893277 D 671143 CDS YP_003207081.1 392375248 13097414 1893845..1894264 1 NC_013260.1 DNA polymerase, beta-like region 1894264 13097414 DAMO_2200 Candidatus Methylomirabilis oxyfera DNA polymerase, beta-like region YP_003207081.1 1893845 D 671143 CDS YP_003207082.1 392375249 13097415 1894261..1894677 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1894677 13097415 DAMO_2201 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207082.1 1894261 D 671143 CDS YP_003207083.1 392375250 13097416 1894713..1895096 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1895096 13097416 DAMO_2202 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207083.1 1894713 D 671143 CDS YP_003207084.1 392375251 13097417 1895103..1895186 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1895186 13097417 DAMO_2203 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207084.1 1895103 D 671143 CDS YP_003207085.1 392375252 13097418 1895437..1895865 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1895865 13097418 DAMO_2204 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207085.1 1895437 D 671143 CDS YP_003207086.1 392375253 13097419 1896011..1897261 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; oxidoreductase with FAD/NAD(P)-binding domain 1897261 13097419 DAMO_2205 Candidatus Methylomirabilis oxyfera oxidoreductase with FAD/NAD(P)-binding domain YP_003207086.1 1896011 D 671143 CDS YP_003207087.1 392375254 13097420 1897307..1899214 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type t : transporter; ABC transporter with duplicated ATPase domains 1899214 13097420 DAMO_2206 Candidatus Methylomirabilis oxyfera ABC transporter with duplicated ATPase domains YP_003207087.1 1897307 D 671143 CDS YP_003207088.1 392375255 13097421 1899311..1900885 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11916677; Product type pt : putative transporter; transporter fused subunits of ABC superfamily: ATP-binding components 1900885 ybiT 13097421 ybiT Candidatus Methylomirabilis oxyfera transporter fused subunits of ABC superfamily: ATP-binding components YP_003207088.1 1899311 D 671143 CDS YP_003207089.1 392375256 13097422 1900934..1901938 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; oxidoreductase 1901938 13097422 DAMO_2208 Candidatus Methylomirabilis oxyfera oxidoreductase YP_003207089.1 1900934 D 671143 CDS YP_003207090.1 392375257 13097423 1901929..1902924 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1902924 13097423 DAMO_2209 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207090.1 1901929 D 671143 CDS YP_003207091.1 392375258 13097424 1902973..1903140 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1903140 13097424 DAMO_2210 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207091.1 1902973 D 671143 CDS YP_003207092.1 392375259 13097425 1903137..1903553 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1903553 13097425 DAMO_2211 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207092.1 1903137 D 671143 CDS YP_003207093.1 392375260 13097427 complement(1903965..1904273) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1904273 13097427 DAMO_2212 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207093.1 1903965 R 671143 CDS YP_003207094.1 392375261 13097428 complement(1904471..1905991) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1905991 13097428 DAMO_2213 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207094.1 1904471 R 671143 CDS YP_003207095.1 392375262 13097429 complement(1906003..1908522) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; helicase 1908522 13097429 DAMO_2214 Candidatus Methylomirabilis oxyfera helicase YP_003207095.1 1906003 R 671143 CDS YP_003207096.1 392375263 13098892 1908914..1909144 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1909144 13098892 DAMO_2215 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207096.1 1908914 D 671143 CDS YP_003207097.1 392375264 13097430 complement(1909148..1909375) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1909375 13097430 DAMO_2216 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207097.1 1909148 R 671143 CDS YP_003207098.1 392375265 13097431 complement(1909372..1910037) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1910037 13097431 DAMO_2217 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207098.1 1909372 R 671143 CDS YP_003207099.1 392375266 13097432 complement(1910034..1911428) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Outer membrane efflux protein 1911428 13097432 DAMO_2218 Candidatus Methylomirabilis oxyfera Outer membrane efflux protein YP_003207099.1 1910034 R 671143 CDS YP_003207100.1 392375267 13097433 complement(1911481..1911921) 1 NC_013260.1 Mce-related protein 1911921 13097433 DAMO_2219 Candidatus Methylomirabilis oxyfera Mce-related protein YP_003207100.1 1911481 R 671143 CDS YP_003207101.1 392375268 13099858 complement(1911996..1912742) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter ATP-binding protein 1912742 13099858 DAMO_2220 Candidatus Methylomirabilis oxyfera ABC transporter ATP-binding protein YP_003207101.1 1911996 R 671143 CDS YP_003207102.1 392375269 13097434 complement(1912756..1913526) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 9658016; Product type t : transporter; toluene ABC transporter subunit membrane protein 1913526 yrbE 13097434 yrbE Candidatus Methylomirabilis oxyfera toluene ABC transporter subunit membrane protein YP_003207102.1 1912756 R 671143 CDS YP_003207103.1 392375270 13097435 complement(1913664..1913888) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1913888 13097435 DAMO_2222 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207103.1 1913664 R 671143 CDS YP_003207104.1 392375271 13097436 1914009..1914671 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1914671 13097436 DAMO_2223 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207104.1 1914009 D 671143 CDS YP_003207105.1 392375272 13097437 1914950..1915159 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1915159 13097437 DAMO_2225 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207105.1 1914950 D 671143 CDS YP_003207106.1 392375273 13097438 1915159..1915335 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1915335 13097438 DAMO_2224 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207106.1 1915159 D 671143 CDS YP_003207107.1 392375274 13097439 complement(1915564..1915779) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1915779 13097439 DAMO_2226 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207107.1 1915564 R 671143 CDS YP_003207108.1 392375275 13097440 complement(1915769..1916023) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1916023 13097440 DAMO_2227 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207108.1 1915769 R 671143 CDS YP_003207109.1 392375276 13097441 complement(1916302..1916712) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1916712 13097441 DAMO_2228 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207109.1 1916302 R 671143 CDS YP_003207110.1 392375277 13097442 complement(1916768..1917025) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1917025 13097442 DAMO_2229 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207110.1 1916768 R 671143 CDS YP_003207111.1 392375278 13098910 complement(1917041..1917295) 1 NC_013260.1 Plasmid stabilization system 1917295 13098910 DAMO_2230 Candidatus Methylomirabilis oxyfera Plasmid stabilization system YP_003207111.1 1917041 R 671143 CDS YP_003207112.1 392375279 13097443 complement(1917270..1917548) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1917548 13097443 DAMO_2231 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207112.1 1917270 R 671143 CDS YP_003207113.1 392375280 13097444 complement(1917767..1917907) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1917907 13097444 DAMO_2232 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207113.1 1917767 R 671143 CDS YP_003207114.1 392375281 13097446 complement(1917892..1918257) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1918257 13097446 DAMO_2233 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207114.1 1917892 R 671143 CDS YP_003207115.1 392375282 13097445 1918373..1919035 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1919035 13097445 DAMO_2234 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207115.1 1918373 D 671143 CDS YP_003207116.1 392375283 13097448 1919415..1919870 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1919870 13097448 DAMO_2235 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207116.1 1919415 D 671143 CDS YP_003207117.1 392375284 13097449 complement(1919808..1920503) 1 NC_013260.1 histidine biosynthesis bifunctional phosphoribosyl-AMP cyclohydrolase /phosphoribosyl-ATP pyrophosphatase 1920503 hisI 13097449 hisI Candidatus Methylomirabilis oxyfera histidine biosynthesis bifunctional phosphoribosyl-AMP cyclohydrolase /phosphoribosyl-ATP pyrophosphatase YP_003207117.1 1919808 R 671143 CDS YP_003207118.1 392375285 13097450 complement(1920510..1921349) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; imidazole glycerol phosphate synthase subunit HisF 1921349 hisF 13097450 hisF Candidatus Methylomirabilis oxyfera imidazole glycerol phosphate synthase subunit HisF YP_003207118.1 1920510 R 671143 CDS YP_003207119.1 392375286 13097451 complement(1921353..1922075) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8028028; Product type e : enzyme; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase 1922075 hisA 13097451 hisA Candidatus Methylomirabilis oxyfera N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase YP_003207119.1 1921353 R 671143 CDS YP_003207120.1 392375287 13097453 1922232..1922417 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1922417 13097453 DAMO_2240 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207120.1 1922232 D 671143 CDS YP_003207121.1 392375288 13097454 complement(1922721..1923044) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1923044 13097454 DAMO_2241 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207121.1 1922721 R 671143 CDS YP_003207122.1 392375289 13099857 complement(1923882..1924469) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15042344, 3062174; Product type e : enzyme; imidazoleglycerol-phosphate dehydratase 1924469 hisB 13099857 hisB Candidatus Methylomirabilis oxyfera imidazoleglycerol-phosphate dehydratase YP_003207122.1 1923882 R 671143 CDS YP_003207123.1 392375290 13097456 complement(1924589..1925668) 1 NC_013260.1 histidinol-phosphate aminotransferase 2 (Imidazole acetol-phosphate transaminase 2) 1925668 hisC 13097456 hisC Candidatus Methylomirabilis oxyfera histidinol-phosphate aminotransferase 2 (Imidazole acetol-phosphate transaminase 2) YP_003207123.1 1924589 R 671143 CDS YP_003207124.1 392375291 13098442 complement(1925670..1926959) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11842181; Product type e : enzyme; histidinol dehydrogenase 1926959 hisD 13098442 hisD Candidatus Methylomirabilis oxyfera histidinol dehydrogenase YP_003207124.1 1925670 R 671143 CDS YP_003207125.1 392375292 13098438 complement(1926956..1927639) 1 NC_013260.1 ATP phosphoribosyltransferase 1927639 hisG 13098438 hisG Candidatus Methylomirabilis oxyfera ATP phosphoribosyltransferase YP_003207125.1 1926956 R 671143 CDS YP_003207126.1 392375293 13098432 complement(1927719..1928999) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512209, 9485407; Product type e : enzyme; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) 1928999 murA 13098432 murA Candidatus Methylomirabilis oxyfera UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) YP_003207126.1 1927719 R 671143 CDS YP_003207127.1 392375294 13098440 complement(1928968..1929861) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11805295; Product type e : enzyme; protein methyltransferase hemK modifies release factors RF-1 and RF-2 1929861 13098440 DAMO_2248 Candidatus Methylomirabilis oxyfera protein methyltransferase hemK modifies release factors RF-1 and RF-2 YP_003207127.1 1928968 R 671143 CDS YP_003207128.1 392375295 13097457 complement(1929972..1931048) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8821264; Product type f : factor; peptide chain release factor 1 1931048 prfA 13097457 prfA Candidatus Methylomirabilis oxyfera peptide chain release factor 1 YP_003207128.1 1929972 R 671143 CDS YP_003207129.1 392375296 13097458 complement(1931082..1931360) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 50S ribosomal protein L31 1931360 13097458 DAMO_2250 Candidatus Methylomirabilis oxyfera 50S ribosomal protein L31 YP_003207129.1 1931082 R 671143 CDS YP_003207130.1 392375297 13098441 complement(1931606..1932940) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8606169; Product type f : factor; transcription termination factor Rho 1932940 rho 13098441 rho Candidatus Methylomirabilis oxyfera transcription termination factor Rho YP_003207130.1 1931606 R 671143 CDS YP_003207131.1 392375298 13098433 complement(1933388..1934029) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; dephospho-CoA kinase 1934029 coaE 13098433 coaE Candidatus Methylomirabilis oxyfera dephospho-CoA kinase YP_003207131.1 1933388 R 671143 CDS YP_003207132.1 392375299 13098435 complement(1934111..1936732) 1 NC_013260.1 DNA polymerase I 1936732 polA 13098435 polA Candidatus Methylomirabilis oxyfera DNA polymerase I YP_003207132.1 1934111 R 671143 CDS YP_003207133.1 392375300 13098437 complement(1936862..1937953) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9061015; Product type f : factor; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK 1937953 dnaJ 13098437 dnaJ Candidatus Methylomirabilis oxyfera chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK YP_003207133.1 1936862 R 671143 CDS YP_003207134.1 392375301 13098439 complement(1937941..1938585) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8890154; Product type f : factor; protein grpE (HSP-70 cofactor) 1938585 grpE 13098439 grpE Candidatus Methylomirabilis oxyfera protein grpE (HSP-70 cofactor) YP_003207134.1 1937941 R 671143 CDS YP_003207135.1 392375302 13098568 complement(1938674..1939714) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10613857; Product type r : regulator; Heat-inducible transcription repressor 1939714 hrcA 13098568 hrcA Candidatus Methylomirabilis oxyfera Heat-inducible transcription repressor YP_003207135.1 1938674 R 671143 CDS YP_003207136.1 392375303 13097459 complement(1939867..1941060) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; oxygen-independent coproporphyrinogen III oxidase (yggW) 1941060 13097459 DAMO_2257 Candidatus Methylomirabilis oxyfera oxygen-independent coproporphyrinogen III oxidase (yggW) YP_003207136.1 1939867 R 671143 CDS YP_003207137.1 392375304 13098674 complement(1941057..1941695) 1 NC_013260.1 peptidase S26A, signal peptidase I 1941695 13098674 DAMO_2258 Candidatus Methylomirabilis oxyfera peptidase S26A, signal peptidase I YP_003207137.1 1941057 R 671143 CDS YP_003207138.1 392375305 13097460 complement(1941692..1943500) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2826164, 2999765; Product type f : factor; GTP-binding elongation factor 1943500 lepA 13097460 lepA Candidatus Methylomirabilis oxyfera GTP-binding elongation factor YP_003207138.1 1941692 R 671143 CDS YP_003207139.1 392375306 13098725 complement(1943621..1944598) 1 NC_013260.1 polyprenyl synthetase 1944598 13098725 DAMO_2260 Candidatus Methylomirabilis oxyfera polyprenyl synthetase YP_003207139.1 1943621 R 671143 CDS YP_003207140.1 392375307 13100053 complement(1944629..1946329) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1946329 13100053 DAMO_2261 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207140.1 1944629 R 671143 CDS YP_003207141.1 392375308 13098670 complement(1946316..1946978) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 1946978 13098670 DAMO_2262 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207141.1 1946316 R 671143 CDS YP_003207142.1 392375309 13100087 complement(1947000..1947260) 1 NC_013260.1 hypothetical protein 1947260 13100087 DAMO_2263 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207142.1 1947000 R 671143 CDS YP_003207143.1 392375310 13098416 complement(1947257..1947706) 1 NC_013260.1 hypothetical protein 1947706 13098416 DAMO_2264 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207143.1 1947257 R 671143 CDS YP_003207144.1 392375311 13098450 complement(1947703..1948257) 1 NC_013260.1 hypothetical protein 1948257 13098450 DAMO_2265 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207144.1 1947703 R 671143 CDS YP_003207145.1 392375312 13097461 complement(1948289..1948876) 1 NC_013260.1 intracellular protease, PfpI family 1948876 13097461 DAMO_2266 Candidatus Methylomirabilis oxyfera intracellular protease, PfpI family YP_003207145.1 1948289 R 671143 CDS YP_003207146.1 392375313 13097462 complement(1948907..1949221) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transcriptional regulator 1949221 13097462 DAMO_2267 Candidatus Methylomirabilis oxyfera transcriptional regulator YP_003207146.1 1948907 R 671143 CDS YP_003207147.1 392375314 13098498 complement(1949218..1949523) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1949523 13098498 DAMO_2268 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207147.1 1949218 R 671143 CDS YP_003207148.1 392375315 13097463 complement(1949673..1950224) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1950224 13097463 DAMO_2269 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207148.1 1949673 R 671143 CDS YP_003207149.1 392375316 13097464 complement(1950519..1950920) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1950920 13097464 DAMO_2270 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207149.1 1950519 R 671143 CDS YP_003207150.1 392375317 13097465 complement(1951041..1951580) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1951580 13097465 DAMO_2271 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207150.1 1951041 R 671143 CDS YP_003207151.1 392375318 13097466 complement(1951692..1952489) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1952489 13097466 DAMO_2272 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207151.1 1951692 R 671143 CDS YP_003207152.1 392375319 13097467 complement(1952615..1953013) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1953013 13097467 DAMO_2273 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207152.1 1952615 R 671143 CDS YP_003207153.1 392375320 13097468 complement(1952737..1952817) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1952817 13097468 DAMO_2274 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207153.1 1952737 R 671143 CDS YP_003207154.1 392375321 13097469 complement(1953031..1953315) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1953315 13097469 DAMO_2275 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207154.1 1953031 R 671143 CDS YP_003207155.1 392375322 13097470 complement(1953668..1953748) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1953748 13097470 DAMO_2276 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207155.1 1953668 R 671143 CDS YP_003207156.1 392375323 13097471 complement(1953758..1953976) 1 NC_013260.1 prevent-host-death family protein 1953976 13097471 DAMO_2277 Candidatus Methylomirabilis oxyfera prevent-host-death family protein YP_003207156.1 1953758 R 671143 CDS YP_003207157.1 392375324 13097472 complement(1953973..1954371) 1 NC_013260.1 PilT protein domain-containing protein 1954371 13097472 DAMO_2278 Candidatus Methylomirabilis oxyfera PilT protein domain-containing protein YP_003207157.1 1953973 R 671143 CDS YP_003207158.1 392375325 13097473 1954769..1954942 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1954942 13097473 DAMO_2279 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207158.1 1954769 D 671143 CDS YP_003207159.1 392375326 13097474 1954996..1955394 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1955394 13097474 DAMO_2280 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207159.1 1954996 D 671143 CDS YP_003207160.1 392375327 13097475 complement(1955421..1955987) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1955987 13097475 DAMO_2281 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207160.1 1955421 R 671143 CDS YP_003207161.1 392375328 13097476 complement(1956112..1956498) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1956498 13097476 DAMO_2282 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207161.1 1956112 R 671143 CDS YP_003207162.1 392375329 13097477 complement(1956527..1959232) 1 NC_013260.1 Cation-transporting ATPase pacL 1959232 pacL 13097477 pacL Candidatus Methylomirabilis oxyfera Cation-transporting ATPase pacL YP_003207162.1 1956527 R 671143 CDS YP_003207163.1 392375330 13097478 complement(1959219..1960040) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; formate transporter 1 (Formate channel 1) 1960040 focA 13097478 focA Candidatus Methylomirabilis oxyfera formate transporter 1 (Formate channel 1) YP_003207163.1 1959219 R 671143 CDS YP_003207164.1 392375331 13097479 complement(1960124..1961410) 1 NC_013260.1 hydroxylamine oxidase 1961410 13097479 DAMO_2285 Candidatus Methylomirabilis oxyfera hydroxylamine oxidase YP_003207164.1 1960124 R 671143 CDS YP_003207165.1 392375332 13097480 complement(1961651..1962463) 1 NC_013260.1 mechanosensitive ion channel protein MscS 1962463 13097480 DAMO_2286 Candidatus Methylomirabilis oxyfera mechanosensitive ion channel protein MscS YP_003207165.1 1961651 R 671143 CDS YP_003207166.1 392375333 13097481 1962410..1962652 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1962652 13097481 DAMO_2287 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207166.1 1962410 D 671143 CDS YP_003207167.1 392375334 13097482 complement(1962799..1963605) 1 NC_013260.1 IclR family transcriptional regulator 1963605 13097482 DAMO_2288 Candidatus Methylomirabilis oxyfera IclR family transcriptional regulator YP_003207167.1 1962799 R 671143 CDS YP_003207168.1 392375335 13097483 complement(1963544..1963765) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1963765 13097483 DAMO_2289 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207168.1 1963544 R 671143 CDS YP_003207169.1 392375336 13097484 complement(1963728..1964441) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; hypothetical protein 1964441 yggS 13097484 yggS Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207169.1 1963728 R 671143 CDS YP_003207170.1 392375337 13097485 complement(1964451..1964642) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1964642 13097485 DAMO_2291 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207170.1 1964451 R 671143 CDS YP_003207171.1 392375338 13098629 complement(1964694..1965872) 1 NC_013260.1 cell division protein ftsZ 1965872 ftsZ 13098629 ftsZ Candidatus Methylomirabilis oxyfera cell division protein ftsZ YP_003207171.1 1964694 R 671143 CDS YP_003207172.1 392375339 13100215 complement(1965912..1967147) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 2228979, 2995680; Product type ph : phenotype; cell division protein 1967147 ftsA 13100215 ftsA Candidatus Methylomirabilis oxyfera cell division protein YP_003207172.1 1965912 R 671143 CDS YP_003207173.1 392375340 13097486 complement(1967144..1967869) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1967869 13097486 DAMO_2294 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207173.1 1967144 R 671143 CDS YP_003207174.1 392375341 13097487 complement(1968003..1968929) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8805513, 9020778, 9150408; Product type e : enzyme; UDP-N-acetylenolpyruvoylglucosamine reductase (MurB-like) 1968929 murB 13097487 murB Candidatus Methylomirabilis oxyfera UDP-N-acetylenolpyruvoylglucosamine reductase (MurB-like) YP_003207174.1 1968003 R 671143 CDS YP_003207175.1 392375342 13097488 complement(1968920..1970347) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2197603, 7601127; Product type e : enzyme; UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme 1970347 murC 13097488 murC Candidatus Methylomirabilis oxyfera UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme YP_003207175.1 1968920 R 671143 CDS YP_003207176.1 392375343 13097489 complement(1970340..1971503) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10892798; Product type e : enzyme; UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 1971503 murG 13097489 murG Candidatus Methylomirabilis oxyfera UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase YP_003207176.1 1970340 R 671143 CDS YP_003207177.1 392375344 13097490 complement(1971500..1972615) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9006034, 9218774; Product type m : membrane component; essential cell division protein (stabilizes FtsZ ring) 1972615 ftsW 13097490 ftsW Candidatus Methylomirabilis oxyfera essential cell division protein (stabilizes FtsZ ring) YP_003207177.1 1971500 R 671143 CDS YP_003207178.1 392375345 13098902 complement(1972612..1973994) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10966819; Product type e : enzyme; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1973994 murD 13098902 murD Candidatus Methylomirabilis oxyfera UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_003207178.1 1972612 R 671143 CDS YP_003207179.1 392375346 13097491 complement(1974008..1975090) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10564498, 1846850; Product type e : enzyme; phospho-N-acetylmuramoyl-pentapeptide transferase 1975090 mraY 13097491 mraY Candidatus Methylomirabilis oxyfera phospho-N-acetylmuramoyl-pentapeptide transferase YP_003207179.1 1974008 R 671143 CDS YP_003207180.1 392375347 13100231 complement(1975201..1976511) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; D-alanine--D-alanine ligase A (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) 1976511 13100231 DAMO_2301 Candidatus Methylomirabilis oxyfera D-alanine--D-alanine ligase A (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) YP_003207180.1 1975201 R 671143 CDS YP_003207181.1 392375348 13100222 complement(1976508..1978214) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1978214 13100222 DAMO_2302 Candidatus Methylomirabilis oxyfera UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_003207181.1 1976508 R 671143 CDS YP_003207182.1 392375349 13097492 complement(1978211..1978978) 1 NC_013260.1 hydrolase 1978978 MhpC 13097492 MhpC Candidatus Methylomirabilis oxyfera hydrolase YP_003207182.1 1978211 R 671143 CDS YP_003207183.1 392375350 13098569 complement(1979101..1980615) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2269304, 9166795; Product type e : enzyme; UDP-N-acetylmuramoylalanyl-D-glutamate 2, 6-diaminopimelate ligase (UDP-N-acetylmuramyl-tripeptide synthetase) 1980615 murE 13098569 murE Candidatus Methylomirabilis oxyfera UDP-N-acetylmuramoylalanyl-D-glutamate 2, 6-diaminopimelate ligase (UDP-N-acetylmuramyl-tripeptide synthetase) YP_003207183.1 1979101 R 671143 CDS YP_003207184.1 392375351 13098570 complement(1980593..1982386) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 2677607, 3911028; Product type e : enzyme; division-specific transpeptidase, penicillin-binding protein 1982386 ftsI 13098570 ftsI Candidatus Methylomirabilis oxyfera division-specific transpeptidase, penicillin-binding protein YP_003207184.1 1980593 R 671143 CDS YP_003207185.1 392375352 13098573 complement(1982403..1982807) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1982807 13098573 DAMO_2306 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207185.1 1982403 R 671143 CDS YP_003207186.1 392375353 13100229 complement(1982767..1983672) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; S-adenosyl-dependent methyltransferase 1983672 mraW 13100229 mraW Candidatus Methylomirabilis oxyfera S-adenosyl-dependent methyltransferase YP_003207186.1 1982767 R 671143 CDS YP_003207187.1 392375354 13098571 complement(1983705..1984154) 1 NC_013260.1 protein mraZ 1984154 mraZ 13098571 mraZ Candidatus Methylomirabilis oxyfera protein mraZ YP_003207187.1 1983705 R 671143 CDS YP_003207188.1 392375355 13098552 complement(1984384..1985232) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11377204; Product type e : enzyme; pantothenate synthetase (Pantoate--beta-alanine ligase) 1985232 panC 13098552 panC Candidatus Methylomirabilis oxyfera pantothenate synthetase (Pantoate--beta-alanine ligase) YP_003207188.1 1984384 R 671143 CDS YP_003207189.1 392375356 13097493 complement(1985313..1986155) 1 NC_013260.1 3-methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase) (KPHMT) 1986155 panB 13097493 panB Candidatus Methylomirabilis oxyfera 3-methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase) (KPHMT) YP_003207189.1 1985313 R 671143 CDS YP_003207190.1 392375357 13097494 complement(1986335..1986991) 1 NC_013260.1 Deoxynucleoside kinase family protein 1986991 13097494 DAMO_2311 Candidatus Methylomirabilis oxyfera Deoxynucleoside kinase family protein YP_003207190.1 1986335 R 671143 CDS YP_003207191.1 392375358 13098541 complement(1986992..1987522) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 1987522 folK 13098541 folK Candidatus Methylomirabilis oxyfera 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YP_003207191.1 1986992 R 671143 CDS YP_003207192.1 392375359 13098572 complement(1987580..1988761) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; PLP-dependent aminotransferase, putative aspartate aminotransferase 1988761 13098572 DAMO_2313 Candidatus Methylomirabilis oxyfera PLP-dependent aminotransferase, putative aspartate aminotransferase YP_003207192.1 1987580 R 671143 CDS YP_003207193.1 392375360 13100227 complement(1988803..1989564) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 1989564 13100227 DAMO_2314 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207193.1 1988803 R 671143 CDS YP_003207194.1 392375361 13097495 complement(1989642..1990448) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12962488, 7893644, 8990304; Product type e : enzyme; dihydrodipicolinate reductase (DHPR) 1990448 dapB 13097495 dapB Candidatus Methylomirabilis oxyfera dihydrodipicolinate reductase (DHPR) YP_003207194.1 1989642 R 671143 CDS YP_003207195.1 392375362 13098551 complement(1990537..1991421) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7853400, 8993314; Product type e : enzyme; dihydrodipicolinate synthase 1991421 dapA 13098551 dapA Candidatus Methylomirabilis oxyfera dihydrodipicolinate synthase YP_003207195.1 1990537 R 671143 CDS YP_003207196.1 392375363 13098553 complement(1991505..1992329) 1 NC_013260.1 diaminopimelate epimerase 1992329 dapF 13098553 dapF Candidatus Methylomirabilis oxyfera diaminopimelate epimerase YP_003207196.1 1991505 R 671143 CDS YP_003207197.1 392375364 13098631 complement(1992381..1993637) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12637582; Product type e : enzyme; diaminopimelate decarboxylase 1993637 lysA 13098631 lysA Candidatus Methylomirabilis oxyfera diaminopimelate decarboxylase YP_003207197.1 1992381 R 671143 CDS YP_003207198.1 392375365 13098630 1993636..1993938 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1993938 13098630 DAMO_2319 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207198.1 1993636 D 671143 CDS YP_003207199.1 392375366 13097496 complement(1994022..1996913) 1 NC_013260.1 type I site-specific deoxyribonuclease, HsdR family 1996913 13097496 DAMO_2320 Candidatus Methylomirabilis oxyfera type I site-specific deoxyribonuclease, HsdR family YP_003207199.1 1994022 R 671143 CDS YP_003207200.1 392375367 13100219 1997018..1997089 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1997089 13100219 DAMO_2321 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207200.1 1997018 D 671143 CDS YP_003207201.1 392375368 13097497 complement(1997028..1998686) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transcriptional regulator 1998686 13097497 DAMO_2322 Candidatus Methylomirabilis oxyfera transcriptional regulator YP_003207201.1 1997028 R 671143 CDS YP_003207202.1 392375369 13097498 complement(1998811..1999725) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 1999725 13097498 DAMO_2323 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207202.1 1998811 R 671143 CDS YP_003207203.1 392375370 13100075 complement(1999801..2001153) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2001153 13100075 DAMO_2324 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207203.1 1999801 R 671143 CDS YP_003207204.1 392375371 13100074 complement(2001140..2002492) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Restriction modification system DNA specificity domain 2002492 13100074 DAMO_2325 Candidatus Methylomirabilis oxyfera Restriction modification system DNA specificity domain YP_003207204.1 2001140 R 671143 CDS YP_003207205.1 392375372 13100076 complement(2002610..2003347) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2003347 13100076 DAMO_2326 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207205.1 2002610 R 671143 CDS YP_003207206.1 392375373 13098524 2003359..2003604 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2003604 13098524 DAMO_2329 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207206.1 2003359 D 671143 CDS YP_003207207.1 392375374 13097499 complement(2003765..2005687) 1 NC_013260.1 N-6 DNA methylase 2005687 13097499 DAMO_2330 Candidatus Methylomirabilis oxyfera N-6 DNA methylase YP_003207207.1 2003765 R 671143 CDS YP_003207208.1 392375375 13097500 2005737..2005901 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2005901 13097500 DAMO_2331 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207208.1 2005737 D 671143 CDS YP_003207209.1 392375376 13097501 complement(2006354..2006557) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10618253, 1597410, 2404279; Product type f : factor; Cold shock protein, DNA binding 2006557 cspA 13097501 cspA Candidatus Methylomirabilis oxyfera Cold shock protein, DNA binding YP_003207209.1 2006354 R 671143 CDS YP_003207210.1 392375377 13097502 complement(2006667..2008691) 1 NC_013260.1 UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B) 2008691 uvrB 13097502 uvrB Candidatus Methylomirabilis oxyfera UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B) YP_003207210.1 2006667 R 671143 CDS YP_003207211.1 392375378 13097503 complement(2008704..2009300) 1 NC_013260.1 HNH endonuclease 2009300 13097503 DAMO_2334 Candidatus Methylomirabilis oxyfera HNH endonuclease YP_003207211.1 2008704 R 671143 CDS YP_003207212.1 392375379 13097504 complement(2009351..2010289) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Exopolyphosphatase 2010289 13097504 DAMO_2335 Candidatus Methylomirabilis oxyfera Exopolyphosphatase YP_003207212.1 2009351 R 671143 CDS YP_003207213.1 392375380 13097505 complement(2010491..2012353) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Fibronectin-binding protein / Fibrinogen-bindingprotein 2012353 13097505 DAMO_2336 Candidatus Methylomirabilis oxyfera Fibronectin-binding protein / Fibrinogen-bindingprotein YP_003207213.1 2010491 R 671143 CDS YP_003207214.1 392375381 13097506 2012465..2012881 1 NC_013260.1 MarR family transcriptional regulator 2012881 13097506 DAMO_2337 Candidatus Methylomirabilis oxyfera MarR family transcriptional regulator YP_003207214.1 2012465 D 671143 CDS YP_003207215.1 392375382 13097507 complement(2013029..2013157) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2013157 13097507 DAMO_2338 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207215.1 2013029 R 671143 CDS YP_003207216.1 392375383 13097508 2013158..2013934 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; Particulate methane monooxygenase, c-subunit2 (PMO) 2013934 pmoC2 13097508 pmoC2 Candidatus Methylomirabilis oxyfera Particulate methane monooxygenase, c-subunit2 (PMO) YP_003207216.1 2013158 D 671143 CDS YP_003207217.1 392375384 13097509 2014118..2014897 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2014897 13097509 DAMO_2340 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207217.1 2014118 D 671143 CDS YP_003207218.1 392375385 13100059 2014927..2015295 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2015295 13100059 DAMO_2341 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207218.1 2014927 D 671143 CDS YP_003207219.1 392375386 13098880 complement(2015262..2017877) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10503543, 10601012; Product type e : enzyme; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)(Excinuclease ATPase subunit) 2017877 uvrA 13098880 uvrA Candidatus Methylomirabilis oxyfera UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)(Excinuclease ATPase subunit) YP_003207219.1 2015262 R 671143 CDS YP_003207220.1 392375387 13097510 complement(2017856..2017945) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2017945 13097510 DAMO_2343 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207220.1 2017856 R 671143 CDS YP_003207221.1 392375388 13097512 complement(2018246..2018500) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2018500 13097512 DAMO_2344 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207221.1 2018246 R 671143 CDS YP_003207222.1 392375389 13097513 2018288..2019316 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2019316 13097513 DAMO_2345 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207222.1 2018288 D 671143 CDS YP_003207223.1 392375390 13097514 2019300..2021555 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2021555 13097514 DAMO_2346 Candidatus Methylomirabilis oxyfera membrane protein YP_003207223.1 2019300 D 671143 CDS YP_003207224.1 392375391 13098663 2021703..2021909 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2021909 13098663 DAMO_2347 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207224.1 2021703 D 671143 CDS YP_003207225.1 392375392 13097515 2021929..2022129 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2022129 13097515 DAMO_2348 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207225.1 2021929 D 671143 CDS YP_003207226.1 392375393 13097516 2022098..2022802 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2022802 13097516 DAMO_2349 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207226.1 2022098 D 671143 CDS YP_003207227.1 392375394 13098879 2022814..2023017 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2023017 13098879 DAMO_2350 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207227.1 2022814 D 671143 CDS YP_003207228.1 392375395 13097517 2023099..2023362 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2023362 13097517 DAMO_2351 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207228.1 2023099 D 671143 CDS YP_003207229.1 392375396 13099763 complement(2023359..2024222) 1 NC_013260.1 NAD-dependent epimerase/dehydratase 2024222 13099763 DAMO_2352 Candidatus Methylomirabilis oxyfera NAD-dependent epimerase/dehydratase YP_003207229.1 2023359 R 671143 CDS YP_003207230.1 392375397 13097518 2024221..2024445 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2024445 13097518 DAMO_2353 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207230.1 2024221 D 671143 CDS YP_003207231.1 392375398 13097519 complement(2024449..2025357) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2025357 13097519 DAMO_2354 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207231.1 2024449 R 671143 CDS YP_003207232.1 392375399 13097520 complement(2025446..2026054) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2026054 13097520 DAMO_2355 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207232.1 2025446 R 671143 CDS YP_003207233.1 392375400 13097521 complement(2026295..2028859) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2028859 13097521 DAMO_2356 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207233.1 2026295 R 671143 CDS YP_003207234.1 392375401 13097522 complement(2028865..2029833) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2029833 13097522 DAMO_2357 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207234.1 2028865 R 671143 CDS YP_003207235.1 392375402 13097523 complement(2030046..2031005) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; ABC transporter protein 2031005 13097523 DAMO_2358 Candidatus Methylomirabilis oxyfera ABC transporter protein YP_003207235.1 2030046 R 671143 CDS YP_003207236.1 392375403 13097524 complement(2031113..2032108) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2032108 13097524 DAMO_2359 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207236.1 2031113 R 671143 CDS YP_003207237.1 392375404 13097525 complement(2032108..2033064) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2033064 13097525 DAMO_2360 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207237.1 2032108 R 671143 CDS YP_003207238.1 392375405 13097526 complement(2033090..2034010) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2034010 13097526 DAMO_2361 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207238.1 2033090 R 671143 CDS YP_003207239.1 392375406 13097527 complement(2034379..2034705) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2034705 13097527 DAMO_2362 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207239.1 2034379 R 671143 CDS YP_003207240.1 392375407 13097528 complement(2034761..2035867) 1 NC_013260.1 histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase) 2035867 hisC 13097528 hisC Candidatus Methylomirabilis oxyfera histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase) YP_003207240.1 2034761 R 671143 CDS YP_003207241.1 392375408 13097529 complement(2035882..2036565) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2036565 13097529 DAMO_2364 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207241.1 2035882 R 671143 CDS YP_003207242.1 392375409 13097530 complement(2036674..2037039) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2037039 13097530 DAMO_2365 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207242.1 2036674 R 671143 CDS YP_003207243.1 392375410 13097531 complement(2037112..2037438) 1 NC_013260.1 transport-associated 2037438 13097531 DAMO_2366 Candidatus Methylomirabilis oxyfera transport-associated YP_003207243.1 2037112 R 671143 CDS YP_003207244.1 392375411 13097532 2037579..2038619 1 NC_013260.1 4-hydroxythreonine-4-phosphate dehydrogenase 2038619 pdxA 13097532 pdxA Candidatus Methylomirabilis oxyfera 4-hydroxythreonine-4-phosphate dehydrogenase YP_003207244.1 2037579 D 671143 CDS YP_003207245.1 392375412 13097533 complement(2038668..2039252) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2039252 13097533 DAMO_2368 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207245.1 2038668 R 671143 CDS YP_003207246.1 392375413 13097534 complement(2039370..2040383) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2040383 13097534 DAMO_2369 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207246.1 2039370 R 671143 CDS YP_003207247.1 392375414 13097535 2040621..2040839 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; AbrB family transcriptional regulator 2040839 13097535 DAMO_2370 Candidatus Methylomirabilis oxyfera AbrB family transcriptional regulator YP_003207247.1 2040621 D 671143 CDS YP_003207248.1 392375415 13097536 2040833..2041285 1 NC_013260.1 PilT-like protein 2041285 13097536 DAMO_2371 Candidatus Methylomirabilis oxyfera PilT-like protein YP_003207248.1 2040833 D 671143 CDS YP_003207249.1 392375416 13098436 complement(2041384..2042952) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2042952 13098436 DAMO_2372 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207249.1 2041384 R 671143 CDS YP_003207250.1 392375417 13097537 complement(2043004..2044422) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; aldehyde-dehydrogenase-like protein y4uC 2044422 13097537 DAMO_2373 Candidatus Methylomirabilis oxyfera aldehyde-dehydrogenase-like protein y4uC YP_003207250.1 2043004 R 671143 CDS YP_003207251.1 392375418 13097538 complement(2044459..2044542) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2044542 13097538 DAMO_2374 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207251.1 2044459 R 671143 CDS YP_003207252.1 392375419 13097539 complement(2044640..2045575) 1 NC_013260.1 molybdenum cofactor biosynthesis protein A 1 2045575 moaA 13097539 moaA Candidatus Methylomirabilis oxyfera molybdenum cofactor biosynthesis protein A 1 YP_003207252.1 2044640 R 671143 CDS YP_003207253.1 392375420 13098641 2045582..2045725 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2045725 13098641 DAMO_2376 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207253.1 2045582 D 671143 CDS YP_003207254.1 392375421 13097540 complement(2045970..2046311) 1 NC_013260.1 4Fe-4S ferredoxin iron-sulfur binding domain protein 2046311 13097540 DAMO_2377 Candidatus Methylomirabilis oxyfera 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003207254.1 2045970 R 671143 CDS YP_003207255.1 392375422 13097541 complement(2046388..2046699) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2046699 13097541 DAMO_2378 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207255.1 2046388 R 671143 CDS YP_003207256.1 392375423 13097542 complement(2046783..2047259) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2047259 13097542 DAMO_2379 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207256.1 2046783 R 671143 CDS YP_003207257.1 392375424 13097543 complement(2047259..2048512) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15952888; Product type e : enzyme; cysteine desulfurase 2048512 sufS 13097543 sufS Candidatus Methylomirabilis oxyfera cysteine desulfurase YP_003207257.1 2047259 R 671143 CDS YP_003207258.1 392375425 13097544 complement(2048527..2049969) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12941942; Product type t : transporter; sufD, needed for fhuF Fe-S center production/stability 2049969 sufD 13097544 sufD Candidatus Methylomirabilis oxyfera sufD, needed for fhuF Fe-S center production/stability YP_003207258.1 2048527 R 671143 CDS YP_003207259.1 392375426 13097545 complement(2049986..2050756) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12554644, 14761990; Product type pt : putative transporter; SufC, related to ABC transporter associated with Fe-S cluster assembly (ATP-binding protein) 2050756 sufC 13097545 sufC Candidatus Methylomirabilis oxyfera SufC, related to ABC transporter associated with Fe-S cluster assembly (ATP-binding protein) YP_003207259.1 2049986 R 671143 CDS YP_003207260.1 392375427 13097546 complement(2050887..2052362) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10322040, 12941942; Product type t : transporter; transport protein associated with Fe-S cluster assembly 2052362 sufB 13097546 sufB Candidatus Methylomirabilis oxyfera transport protein associated with Fe-S cluster assembly YP_003207260.1 2050887 R 671143 CDS YP_003207261.1 392375428 13098543 2052381..2052590 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2052590 13098543 DAMO_2384 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207261.1 2052381 D 671143 CDS YP_003207262.1 392375429 13097547 complement(2052497..2053579) 1 NC_013260.1 protein mrp 2053579 mrp 13097547 mrp Candidatus Methylomirabilis oxyfera protein mrp YP_003207262.1 2052497 R 671143 CDS YP_003207263.1 392375430 13097548 complement(2053638..2053973) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2053973 13097548 DAMO_2386 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207263.1 2053638 R 671143 CDS YP_003207264.1 392375431 13097549 complement(2054107..2054502) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2054502 13097549 DAMO_2387 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207264.1 2054107 R 671143 CDS YP_003207265.1 392375432 13097550 2054646..2054831 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2054831 13097550 DAMO_2388 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207265.1 2054646 D 671143 CDS YP_003207266.1 392375433 13098829 complement(2055135..2055329) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2055329 13098829 DAMO_2389 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207266.1 2055135 R 671143 CDS YP_003207267.1 392375434 13098828 complement(2055425..2056054) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2056054 13098828 DAMO_2390 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207267.1 2055425 R 671143 CDS YP_003207268.1 392375435 13098827 2056243..2056413 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2056413 13098827 DAMO_2391 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207268.1 2056243 D 671143 CDS YP_003207269.1 392375436 13098826 complement(2056419..2056754) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2056754 13098826 DAMO_2392 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207269.1 2056419 R 671143 CDS YP_003207270.1 392375437 13097551 complement(2056601..2056675) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2056675 13097551 DAMO_2393 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207270.1 2056601 R 671143 CDS YP_003207271.1 392375438 13098558 complement(2056735..2057034) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2057034 13098558 DAMO_2394 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207271.1 2056735 R 671143 CDS YP_003207272.1 392375439 13097552 complement(2057176..2057412) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2057412 13097552 DAMO_2395 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207272.1 2057176 R 671143 CDS YP_003207273.1 392375440 13097553 complement(2057409..2057714) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2057714 13097553 DAMO_2396 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207273.1 2057409 R 671143 CDS YP_003207274.1 392375441 13097554 complement(2057724..2058116) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2058116 13097554 DAMO_2397 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207274.1 2057724 R 671143 CDS YP_003207275.1 392375442 13097555 2058085..2058516 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2058516 13097555 DAMO_2398 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207275.1 2058085 D 671143 CDS YP_003207276.1 392375443 13097556 2058537..2059418 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2059418 13097556 DAMO_2399 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207276.1 2058537 D 671143 CDS YP_003207277.1 392375444 13097557 2059672..2060283 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2060283 13097557 DAMO_2400 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207277.1 2059672 D 671143 CDS YP_003207278.1 392375445 13097558 2060443..2061192 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2061192 13097558 DAMO_2401 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207278.1 2060443 D 671143 CDS YP_003207279.1 392375446 13097559 2061250..2061750 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 16164551; Product type e : enzyme; Crossover junction endodeoxyribonuclease ruvC (Holliday junction nuclease ruvC) 2061750 ruvC 13097559 ruvC Candidatus Methylomirabilis oxyfera Crossover junction endodeoxyribonuclease ruvC (Holliday junction nuclease ruvC) YP_003207279.1 2061250 D 671143 CDS YP_003207280.1 392375447 13097560 2061747..2062373 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12408833; Product type e : enzyme; Holliday junction DNA helicase ruvA 2062373 ruvA 13097560 ruvA Candidatus Methylomirabilis oxyfera Holliday junction DNA helicase ruvA YP_003207280.1 2061747 D 671143 CDS YP_003207281.1 392375448 13097561 2062370..2063425 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15292508; Product type e : enzyme; Holliday junction DNA helicase ruvB 2063425 ruvB 13097561 ruvB Candidatus Methylomirabilis oxyfera Holliday junction DNA helicase ruvB YP_003207281.1 2062370 D 671143 CDS YP_003207282.1 392375449 13097562 2063470..2063685 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2063685 13097562 DAMO_2405 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207282.1 2063470 D 671143 CDS YP_003207283.1 392375450 13097563 2063720..2064859 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2064859 queA 13097563 queA Candidatus Methylomirabilis oxyfera S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_003207283.1 2063720 D 671143 CDS YP_003207284.1 392375451 13097564 2064917..2066047 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 12646024, 8654383; Product type e : enzyme; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) 2066047 tgt 13097564 tgt Candidatus Methylomirabilis oxyfera tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) YP_003207284.1 2064917 D 671143 CDS YP_003207285.1 392375452 13097565 2066073..2066414 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type t : transporter; preprotein translocase (YajC) 2066414 yajC 13097565 yajC Candidatus Methylomirabilis oxyfera preprotein translocase (YajC) YP_003207285.1 2066073 D 671143 CDS YP_003207286.1 392375453 13097566 complement(2066552..2067706) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; transcriptional regulator, AsnC family; likely to be a fused nirD/G and nirL/H, involved in heme D1 biosynthesis for nitrite reductase 2067706 13097566 DAMO_2409 Candidatus Methylomirabilis oxyfera transcriptional regulator, AsnC family; likely to be a fused nirD/G and nirL/H, involved in heme D1 biosynthesis for nitrite reductase YP_003207286.1 2066552 R 671143 CDS YP_003207287.1 392375454 13097567 complement(2067793..2068128) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; periplasmic nitrate reductase, small subunit (napB); diheme cytochrome C 2068128 13097567 DAMO_2410 Candidatus Methylomirabilis oxyfera periplasmic nitrate reductase, small subunit (napB); diheme cytochrome C YP_003207287.1 2067793 R 671143 CDS YP_003207288.1 392375455 13098798 complement(2068135..2070501) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; periplasmic nitrate reductase, large subunit 2070501 napA 13098798 napA Candidatus Methylomirabilis oxyfera periplasmic nitrate reductase, large subunit YP_003207288.1 2068135 R 671143 CDS YP_003207289.1 392375456 13098796 complement(2070549..2071778) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; heme D1 biosynthesis protein (nirF), involved in nitrite reductase biosynthesis 2071778 13098796 DAMO_2412 Candidatus Methylomirabilis oxyfera heme D1 biosynthesis protein (nirF), involved in nitrite reductase biosynthesis YP_003207289.1 2070549 R 671143 CDS YP_003207290.1 392375457 13098797 complement(2071729..2072949) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; heme D1 biosynthesis protein (nirJ) involved in nitrite reductase biosynthesis 2072949 13098797 DAMO_2413 Candidatus Methylomirabilis oxyfera heme D1 biosynthesis protein (nirJ) involved in nitrite reductase biosynthesis YP_003207290.1 2071729 R 671143 CDS YP_003207291.1 392375458 13097568 complement(2073164..2074804) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; nitrite reductase, cytochrome cd1 type 2074804 nirS 13097568 nirS Candidatus Methylomirabilis oxyfera nitrite reductase, cytochrome cd1 type YP_003207291.1 2073164 R 671143 CDS YP_003207292.1 392375459 13098707 2075149..2076207 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14551435, 15215245; Product type e : enzyme; 5-methylthioribose-1-phosphate isomerase 2076207 mtnA 13098707 mtnA Candidatus Methylomirabilis oxyfera 5-methylthioribose-1-phosphate isomerase YP_003207292.1 2075149 D 671143 CDS YP_003207293.1 392375460 13098837 2076305..2078524 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2078524 13098837 DAMO_2417 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207293.1 2076305 D 671143 CDS YP_003207294.1 392375461 13098890 2078547..2079752 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11278255; Product type e : enzyme; coenzyme A biosynthesis bifunctional phosphopantothenoylcysteine decarboxylase CoaC/phosphopantothenate--cysteine ligase CoaB 2079752 coaBC 13098890 coaBC Candidatus Methylomirabilis oxyfera coenzyme A biosynthesis bifunctional phosphopantothenoylcysteine decarboxylase CoaC/phosphopantothenate--cysteine ligase CoaB YP_003207294.1 2078547 D 671143 CDS YP_003207295.1 392375462 13097569 2079785..2080519 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2080519 13097569 DAMO_2419 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207295.1 2079785 D 671143 CDS YP_003207296.1 392375463 13097570 2080573..2080902 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2080902 13097570 DAMO_2420 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207296.1 2080573 D 671143 CDS YP_003207297.1 392375464 13098589 2080918..2081892 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2081892 13098589 DAMO_2421 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207297.1 2080918 D 671143 CDS YP_003207298.1 392375465 13097571 2081950..2082645 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2082645 13097571 DAMO_2422 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207298.1 2081950 D 671143 CDS YP_003207299.1 392375466 13097572 2082837..2085437 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Primosomal protein N' (ATP-dependent helicase priA) (Replication factor Y) 2085437 13097572 DAMO_2423 Candidatus Methylomirabilis oxyfera Primosomal protein N' (ATP-dependent helicase priA) (Replication factor Y) YP_003207299.1 2082837 D 671143 CDS YP_003207300.1 392375467 13098601 2085529..2086329 1 NC_013260.1 SAM-dependent methyltransferase 2086329 13098601 DAMO_2424 Candidatus Methylomirabilis oxyfera SAM-dependent methyltransferase YP_003207300.1 2085529 D 671143 CDS YP_003207301.1 392375468 13098562 2086326..2087183 1 NC_013260.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2087183 13098562 DAMO_2425 Candidatus Methylomirabilis oxyfera nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003207301.1 2086326 D 671143 CDS YP_003207302.1 392375469 13097573 2087180..2088001 1 NC_013260.1 NH(3)-dependent NAD(+) synthetase 2088001 nadE 13097573 nadE Candidatus Methylomirabilis oxyfera NH(3)-dependent NAD(+) synthetase YP_003207302.1 2087180 D 671143 CDS YP_003207303.1 392375470 13100051 complement(2088201..2088752) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2088752 13100051 DAMO_2427 Candidatus Methylomirabilis oxyfera membrane protein YP_003207303.1 2088201 R 671143 CDS YP_003207304.1 392375471 13097574 complement(2088742..2089611) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2089611 13097574 DAMO_2428 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207304.1 2088742 R 671143 CDS YP_003207305.1 392375472 13097575 2089844..2090338 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2090338 13097575 DAMO_2429 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207305.1 2089844 D 671143 CDS YP_003207306.1 392375473 13097576 complement(2090498..2090785) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2090785 13097576 DAMO_2430 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207306.1 2090498 R 671143 CDS YP_003207307.1 392375474 13097577 2090799..2090975 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2090975 13097577 DAMO_2431 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207307.1 2090799 D 671143 CDS YP_003207308.1 392375475 13097578 complement(2091020..2091400) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2091400 13097578 DAMO_2432 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207308.1 2091020 R 671143 CDS YP_003207309.1 392375476 13097579 2091234..2091482 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2091482 13097579 DAMO_2433 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207309.1 2091234 D 671143 CDS YP_003207310.1 392375477 13097580 complement(2091655..2094081) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Cytochrome c oxidase subunit I; nitric oxide-like (norZ) 2094081 13097580 DAMO_2434 Candidatus Methylomirabilis oxyfera Cytochrome c oxidase subunit I; nitric oxide-like (norZ) YP_003207310.1 2091655 R 671143 CDS YP_003207311.1 392375478 13098588 complement(2094188..2094418) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2094418 13098588 DAMO_2435 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207311.1 2094188 R 671143 CDS YP_003207312.1 392375479 13097581 2094712..2094903 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2094903 13097581 DAMO_2436 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207312.1 2094712 D 671143 CDS YP_003207313.1 392375480 13097582 complement(2094942..2097374) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Cytochrome c oxidase subunit I; nitric oxide reductase-like (norZ) 2097374 13097582 DAMO_2437 Candidatus Methylomirabilis oxyfera Cytochrome c oxidase subunit I; nitric oxide reductase-like (norZ) YP_003207313.1 2094942 R 671143 CDS YP_003207314.1 392375481 13097583 complement(2097737..2097910) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2097910 13097583 DAMO_2438 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207314.1 2097737 R 671143 CDS YP_003207315.1 392375482 13097584 complement(2097945..2098847) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2098847 13097584 DAMO_2439 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207315.1 2097945 R 671143 CDS YP_003207316.1 392375483 13097585 complement(2098742..2098945) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2098945 13097585 DAMO_2440 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207316.1 2098742 R 671143 CDS YP_003207317.1 392375484 13097586 2098931..2099275 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2099275 13097586 DAMO_2441 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207317.1 2098931 D 671143 CDS YP_003207318.1 392375485 13097587 2099296..2100819 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2100819 13097587 DAMO_2442 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207318.1 2099296 D 671143 CDS YP_003207319.1 392375486 13097588 2100948..2101199 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2101199 13097588 DAMO_2443 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207319.1 2100948 D 671143 CDS YP_003207320.1 392375487 13097589 complement(2101203..2101289) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2101289 13097589 DAMO_2444 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207320.1 2101203 R 671143 CDS YP_003207321.1 392375488 13097590 2101693..2103621 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12037319, 7674922; Product type e : enzyme; cell division protein FtsH; ATP-dependent zinc-metallo protease 2103621 ftsH 13097590 ftsH Candidatus Methylomirabilis oxyfera cell division protein FtsH; ATP-dependent zinc-metallo protease YP_003207321.1 2101693 D 671143 CDS YP_003207322.1 392375489 13097591 complement(2103803..2104567) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2104567 13097591 DAMO_2446 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207322.1 2103803 R 671143 CDS YP_003207323.1 392375490 13097592 complement(2104970..2106238) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; Particulate methane monooxygenase, B-subunit (PMO) 2106238 pmoB 13097592 pmoB Candidatus Methylomirabilis oxyfera Particulate methane monooxygenase, B-subunit (PMO) YP_003207323.1 2104970 R 671143 CDS YP_003207324.1 392375491 13097593 complement(2106349..2107080) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; Particulate methane monooxygenase, A-subunit (PMO) 2107080 pmoA 13097593 pmoA Candidatus Methylomirabilis oxyfera Particulate methane monooxygenase, A-subunit (PMO) YP_003207324.1 2106349 R 671143 CDS YP_003207325.1 392375492 13097594 complement(2107187..2107963) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; Particulate methane monooxygenase, C-subunit (PMO) 2107963 pmoC 13097594 pmoC Candidatus Methylomirabilis oxyfera Particulate methane monooxygenase, C-subunit (PMO) YP_003207325.1 2107187 R 671143 CDS YP_003207326.1 392375493 13097595 2108106..2108273 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2108273 13097595 DAMO_2452 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207326.1 2108106 D 671143 CDS YP_003207327.1 392375494 13097596 complement(2108270..2108347) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2108347 13097596 DAMO_2453 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207327.1 2108270 R 671143 CDS YP_003207328.1 392375495 13097597 complement(2108446..2110170) 1 NC_013260.1 hypothetical protein 2110170 13097597 DAMO_2454 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207328.1 2108446 R 671143 CDS YP_003207329.1 392375496 13097598 complement(2110179..2111402) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1134527, 12181321, 14731278, 15554979, 1931833; Product type e : enzyme; ATP-dependent RNA helicase 2111402 rhlB 13097598 rhlB Candidatus Methylomirabilis oxyfera ATP-dependent RNA helicase YP_003207329.1 2110179 R 671143 CDS YP_003207330.1 392375497 13100226 2111714..2112151 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2112151 13100226 DAMO_2456 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207330.1 2111714 D 671143 CDS YP_003207331.1 392375498 13097599 complement(2112292..2113926) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8097179, 8101485; Product type f : factor; 60 kDa chaperonin (Protein Cpn60) (groEL protein) 2113926 groL 13097599 groL Candidatus Methylomirabilis oxyfera 60 kDa chaperonin (Protein Cpn60) (groEL protein) YP_003207331.1 2112292 R 671143 CDS YP_003207332.1 392375499 13098661 complement(2114027..2114314) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8097179, 8101485; Product type f : factor; chaperone Hsp10 (GroES), part of GroE chaperone system 2114314 groS 13098661 groS Candidatus Methylomirabilis oxyfera chaperone Hsp10 (GroES), part of GroE chaperone system YP_003207332.1 2114027 R 671143 CDS YP_003207333.1 392375500 13098660 2114207..2114767 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2114767 13098660 DAMO_2459 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207333.1 2114207 D 671143 CDS YP_003207334.1 392375501 13098662 2114848..2117370 1 NC_013260.1 nucleotidyltransferase 2117370 13098662 DAMO_2460 Candidatus Methylomirabilis oxyfera nucleotidyltransferase YP_003207334.1 2114848 D 671143 CDS YP_003207335.1 392375502 13097600 2117367..2118791 1 NC_013260.1 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 2118791 13097600 DAMO_2461 Candidatus Methylomirabilis oxyfera phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_003207335.1 2117367 D 671143 CDS YP_003207336.1 392375503 13097601 2118806..2119177 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor; Septum formation initiator (ftsB) 2119177 13097601 DAMO_2462 Candidatus Methylomirabilis oxyfera Septum formation initiator (ftsB) YP_003207336.1 2118806 D 671143 CDS YP_003207337.1 392375504 13097602 complement(2119174..2119365) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2119365 13097602 DAMO_2463 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207337.1 2119174 R 671143 CDS YP_003207338.1 392375505 13098724 complement(2119391..2119564) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2119564 13098724 DAMO_2464 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207338.1 2119391 R 671143 CDS YP_003207339.1 392375506 13097603 2119586..2119801 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2119801 13097603 DAMO_2465 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207339.1 2119586 D 671143 CDS YP_003207340.1 392375507 13098414 2119974..2121128 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11171208, 15530989; Product type e : enzyme; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) 2121128 dxr 13098414 dxr Candidatus Methylomirabilis oxyfera 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) YP_003207340.1 2119974 D 671143 CDS YP_003207341.1 392375508 13098415 2121156..2122286 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme; Zinc metalloprotease 2122286 13098415 DAMO_2467 Candidatus Methylomirabilis oxyfera Zinc metalloprotease YP_003207341.1 2121156 D 671143 CDS YP_003207342.1 392375509 13097604 2122338..2123414 1 NC_013260.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2123414 ispG 13097604 ispG Candidatus Methylomirabilis oxyfera 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_003207342.1 2122338 D 671143 CDS YP_003207343.1 392375510 13097605 2123572..2125290 1 NC_013260.1 prolyl-tRNA synthetase (ProRS) 2125290 proS 13097605 proS Candidatus Methylomirabilis oxyfera prolyl-tRNA synthetase (ProRS) YP_003207343.1 2123572 D 671143 CDS YP_003207344.1 392375511 13097606 complement(2125467..2126243) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2126243 13097606 DAMO_2470 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207344.1 2125467 R 671143 CDS YP_003207345.1 392375512 13097607 complement(2126344..2127756) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; aspartate ammonia-lyase (L-aspartase) 2127756 13097607 DAMO_2471 Candidatus Methylomirabilis oxyfera aspartate ammonia-lyase (L-aspartase) YP_003207345.1 2126344 R 671143 CDS YP_003207346.1 392375513 13097608 complement(2127653..2127964) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2127964 13097608 DAMO_2472 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207346.1 2127653 R 671143 CDS YP_003207347.1 392375514 13097609 2128107..2129495 1 NC_013260.1 hydroxylamine oxidoreductase hao 2129495 hao 13097609 hao Candidatus Methylomirabilis oxyfera hydroxylamine oxidoreductase hao YP_003207347.1 2128107 D 671143 CDS YP_003207348.1 392375515 13097610 complement(2129535..2130047) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2130047 13097610 DAMO_2474 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207348.1 2129535 R 671143 CDS YP_003207349.1 392375516 13100173 complement(2130083..2130370) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2130370 13100173 DAMO_2475 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207349.1 2130083 R 671143 CDS YP_003207350.1 392375517 13097611 2130378..2131085 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2131085 13097611 DAMO_2476 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207350.1 2130378 D 671143 CDS YP_003207351.1 392375518 13098477 2131082..2132104 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; GHMP kinase 2132104 13098477 DAMO_2477 Candidatus Methylomirabilis oxyfera GHMP kinase YP_003207351.1 2131082 D 671143 CDS YP_003207352.1 392375519 13098679 complement(2132386..2132781) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2132781 13098679 DAMO_2478 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207352.1 2132386 R 671143 CDS YP_003207353.1 392375520 13097612 complement(2132846..2135026) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2135026 13097612 DAMO_2479 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207353.1 2132846 R 671143 CDS YP_003207354.1 392375521 13097613 complement(2135084..2135695) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2135695 13097613 DAMO_2480 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207354.1 2135084 R 671143 CDS YP_003207355.1 392375522 13097614 complement(2135688..2136260) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2136260 13097614 DAMO_2481 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207355.1 2135688 R 671143 CDS YP_003207356.1 392375523 13098423 complement(2136257..2137732) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2137732 13098423 DAMO_2482 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207356.1 2136257 R 671143 CDS YP_003207357.1 392375524 13097615 complement(2137729..2138799) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2138799 13097615 DAMO_2483 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207357.1 2137729 R 671143 CDS YP_003207358.1 392375525 13097616 complement(2138892..2139707) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2139707 13097616 DAMO_2484 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207358.1 2138892 R 671143 CDS YP_003207359.1 392375526 13097617 complement(2139694..2140224) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; General secretion pathway protein I, GspI 2140224 13097617 DAMO_2485 Candidatus Methylomirabilis oxyfera General secretion pathway protein I, GspI YP_003207359.1 2139694 R 671143 CDS YP_003207360.1 392375527 13097618 complement(2140217..2140801) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2140801 13097618 DAMO_2486 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207360.1 2140217 R 671143 CDS YP_003207361.1 392375528 13097619 complement(2140767..2141273) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 95204361, 96256608; Product type t : transporter; pseudopilin, cryptic, general secretion pathway 2141273 gspG 13097619 gspG Candidatus Methylomirabilis oxyfera pseudopilin, cryptic, general secretion pathway YP_003207361.1 2140767 R 671143 CDS YP_003207362.1 392375529 13097620 complement(2141340..2142566) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 7896718, 96256608; Product type t : transporter; general secretory pathway component, cryptic 2142566 gspF 13097620 gspF Candidatus Methylomirabilis oxyfera general secretory pathway component, cryptic YP_003207362.1 2141340 R 671143 CDS YP_003207363.1 392375530 13097621 complement(2142759..2144480) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; General secretion pathway protein E (Type II traffic warden ATPase) 2144480 13097621 DAMO_2489 Candidatus Methylomirabilis oxyfera General secretion pathway protein E (Type II traffic warden ATPase) YP_003207363.1 2142759 R 671143 CDS YP_003207364.1 392375531 13097622 2144911..2145105 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2145105 13097622 DAMO_2490 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207364.1 2144911 D 671143 CDS YP_003207365.1 392375532 13097623 complement(2145413..2146282) 1 NC_013260.1 short-chain dehydrogenase 2146282 13097623 DAMO_2491 Candidatus Methylomirabilis oxyfera short-chain dehydrogenase YP_003207365.1 2145413 R 671143 CDS YP_003207366.1 392375533 13097624 complement(2146279..2146758) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cyclase 2146758 13097624 DAMO_2492 Candidatus Methylomirabilis oxyfera cyclase YP_003207366.1 2146279 R 671143 CDS YP_003207367.1 392375534 13097625 2146981..2147289 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2147289 13097625 DAMO_2493 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207367.1 2146981 D 671143 CDS YP_003207368.1 392375535 13097626 complement(2147318..2149099) 1 NC_013260.1 ABC-type multidrug/protein/lipid transport system, ATPase component 2149099 MdlB 13097626 MdlB Candidatus Methylomirabilis oxyfera ABC-type multidrug/protein/lipid transport system, ATPase component YP_003207368.1 2147318 R 671143 CDS YP_003207369.1 392375536 13097627 complement(2149096..2150817) 1 NC_013260.1 ABC transporter ATPase 2150817 13097627 DAMO_2495 Candidatus Methylomirabilis oxyfera ABC transporter ATPase YP_003207369.1 2149096 R 671143 CDS YP_003207370.1 392375537 13098418 complement(2151082..2151384) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; plasmid stabilization system protein 2151384 13098418 DAMO_2496 Candidatus Methylomirabilis oxyfera plasmid stabilization system protein YP_003207370.1 2151082 R 671143 CDS YP_003207371.1 392375538 13098417 complement(2151388..2151663) 1 NC_013260.1 prevent-host-death family protein 2151663 13098417 DAMO_2497 Candidatus Methylomirabilis oxyfera prevent-host-death family protein YP_003207371.1 2151388 R 671143 CDS YP_003207372.1 392375539 13097628 complement(2151749..2152804) 1 NC_013260.1 pyruvate formate-lyase activating enzyme 2152804 pflA 13097628 pflA Candidatus Methylomirabilis oxyfera pyruvate formate-lyase activating enzyme YP_003207372.1 2151749 R 671143 CDS YP_003207373.1 392375540 13097629 2153006..2154775 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; malate dehydrogenase 2154775 13097629 DAMO_2499 Candidatus Methylomirabilis oxyfera malate dehydrogenase YP_003207373.1 2153006 D 671143 CDS YP_003207374.1 392375541 13097630 2154910..2155395 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2155395 13097630 DAMO_2500 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207374.1 2154910 D 671143 CDS YP_003207375.1 392375542 13097631 complement(2155396..2155518) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2155518 13097631 DAMO_2501 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207375.1 2155396 R 671143 CDS YP_003207376.1 392375543 13097632 2155517..2156008 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2156008 13097632 DAMO_2502 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207376.1 2155517 D 671143 CDS YP_003207377.1 392375544 13098534 complement(2156134..2156379) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2156379 13098534 DAMO_2503 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207377.1 2156134 R 671143 CDS YP_003207378.1 392375545 13097633 2156343..2156825 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2156825 13097633 DAMO_2504 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207378.1 2156343 D 671143 CDS YP_003207379.1 392375546 13097634 2156822..2156944 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2156944 13097634 DAMO_2505 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207379.1 2156822 D 671143 CDS YP_003207380.1 392375547 13097635 2156948..2157229 1 NC_013260.1 Toxin higB-1 2157229 higB 13097635 higB Candidatus Methylomirabilis oxyfera Toxin higB-1 YP_003207380.1 2156948 D 671143 CDS YP_003207381.1 392375548 13098646 2157243..2157557 1 NC_013260.1 Antitoxin higA-1 2157557 higA 13098646 higA Candidatus Methylomirabilis oxyfera Antitoxin higA-1 YP_003207381.1 2157243 D 671143 CDS YP_003207382.1 392375549 13097636 complement(2157608..2157688) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; hypothetical protein 2157688 13097636 DAMO_2508 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207382.1 2157608 R 671143 CDS YP_003207383.1 392375550 13097637 2157796..2158053 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2158053 13097637 DAMO_2509 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207383.1 2157796 D 671143 CDS YP_003207384.1 392375551 13097638 2158041..2158361 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2158361 13097638 DAMO_2510 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207384.1 2158041 D 671143 CDS YP_003207385.1 392375552 13097639 2158921..2159046 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2159046 13097639 DAMO_2511 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207385.1 2158921 D 671143 CDS YP_003207386.1 392375553 13097640 2159053..2159400 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2159400 13097640 DAMO_2512 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207386.1 2159053 D 671143 CDS YP_003207387.1 392375554 13097641 2159459..2159647 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2159647 13097641 DAMO_2513 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207387.1 2159459 D 671143 CDS YP_003207388.1 392375555 13097642 2159589..2160035 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2160035 13097642 DAMO_2514 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207388.1 2159589 D 671143 CDS YP_003207389.1 392375556 13098431 2160316..2160582 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2160582 13098431 DAMO_2515 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207389.1 2160316 D 671143 CDS YP_003207390.1 392375557 13098430 2160693..2161103 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2161103 13098430 DAMO_2516 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207390.1 2160693 D 671143 CDS YP_003207391.1 392375558 13097643 complement(2161238..2161651) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2161651 13097643 DAMO_2517 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207391.1 2161238 R 671143 CDS YP_003207392.1 392375559 13097644 complement(2161712..2163325) 1 NC_013260.1 indole-3-pyruvate decarboxylase (Indolepyruvate decarboxylase) 2163325 ipdC 13097644 ipdC Candidatus Methylomirabilis oxyfera indole-3-pyruvate decarboxylase (Indolepyruvate decarboxylase) YP_003207392.1 2161712 R 671143 CDS YP_003207393.1 392375560 13097645 complement(2163451..2164731) 1 NC_013260.1 ATPase 2164731 13097645 DAMO_2519 Candidatus Methylomirabilis oxyfera ATPase YP_003207393.1 2163451 R 671143 CDS YP_003207394.1 392375561 13097646 complement(2164750..2165466) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2165466 13097646 DAMO_2520 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207394.1 2164750 R 671143 CDS YP_003207395.1 392375562 13097647 complement(2165591..2165959) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PilT-like protein 2165959 13097647 DAMO_2521 Candidatus Methylomirabilis oxyfera PilT-like protein YP_003207395.1 2165591 R 671143 CDS YP_003207396.1 392375563 13097648 complement(2165970..2166230) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2166230 13097648 DAMO_2522 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207396.1 2165970 R 671143 CDS YP_003207397.1 392375564 13097649 complement(2166597..2167502) 1 NC_013260.1 Ketohexokinase 2167502 KHK 13097649 KHK Candidatus Methylomirabilis oxyfera Ketohexokinase YP_003207397.1 2166597 R 671143 CDS YP_003207398.1 392375565 13097650 complement(2167568..2167840) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2167840 13097650 DAMO_2524 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207398.1 2167568 R 671143 CDS YP_003207399.1 392375566 13097651 2168208..2168447 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2168447 13097651 DAMO_2525 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207399.1 2168208 D 671143 CDS YP_003207400.1 392375567 13097652 2168476..2169366 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV) 2169366 nfo 13097652 nfo Candidatus Methylomirabilis oxyfera endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV) YP_003207400.1 2168476 D 671143 CDS YP_003207401.1 392375568 13098473 2169560..2170222 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type pt : putative transporter; cell division ABC transporter ATP-binding protein 2170222 ftsE 13098473 ftsE Candidatus Methylomirabilis oxyfera cell division ABC transporter ATP-binding protein YP_003207401.1 2169560 D 671143 CDS YP_003207402.1 392375569 13097653 2170239..2171135 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Cell division protein FtsX 2171135 13097653 DAMO_2528 Candidatus Methylomirabilis oxyfera Cell division protein FtsX YP_003207402.1 2170239 D 671143 CDS YP_003207403.1 392375570 13097654 2171160..2172395 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2172395 13097654 DAMO_2529 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207403.1 2171160 D 671143 CDS YP_003207404.1 392375571 13097655 2172485..2173825 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8034700, 8058761, 9141685; Product type e : enzyme; Carboxy-terminal-processing protease (C-terminal-processing protease) 2173825 ctpA 13097655 ctpA Candidatus Methylomirabilis oxyfera Carboxy-terminal-processing protease (C-terminal-processing protease) YP_003207404.1 2172485 D 671143 CDS YP_003207405.1 392375572 13097656 2173899..2174987 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp) 2174987 13097656 DAMO_2531 Candidatus Methylomirabilis oxyfera O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp) YP_003207405.1 2173899 D 671143 CDS YP_003207406.1 392375573 13098493 2174998..2175507 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; peptide deformylase (PDF) (Polypeptide deformylase) 2175507 def 13098493 def Candidatus Methylomirabilis oxyfera peptide deformylase (PDF) (Polypeptide deformylase) YP_003207406.1 2174998 D 671143 CDS YP_003207407.1 392375574 13097657 complement(2175566..2176621) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PpiC-type peptidyl-prolyl cis-trans isomerase 2176621 13097657 DAMO_2533 Candidatus Methylomirabilis oxyfera PpiC-type peptidyl-prolyl cis-trans isomerase YP_003207407.1 2175566 R 671143 CDS YP_003207408.1 392375575 13097658 complement(2176612..2180070) 1 NC_013260.1 transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) 2180070 mfd 13097658 mfd Candidatus Methylomirabilis oxyfera transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) YP_003207408.1 2176612 R 671143 CDS YP_003207409.1 392375576 13098597 complement(2180124..2180615) 1 NC_013260.1 cytidyltransferase-related domain 2180615 13098597 DAMO_2535 Candidatus Methylomirabilis oxyfera cytidyltransferase-related domain YP_003207409.1 2180124 R 671143 CDS YP_003207410.1 392375577 13100223 complement(2180612..2180872) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2180872 13100223 DAMO_2536 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207410.1 2180612 R 671143 CDS YP_003207411.1 392375578 13097659 complement(2181086..2181760) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2181760 13097659 DAMO_2537 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207411.1 2181086 R 671143 CDS YP_003207412.1 392375579 13097660 complement(2181833..2182189) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2182189 13097660 DAMO_2538 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207412.1 2181833 R 671143 CDS YP_003207413.1 392375580 13100062 complement(2182332..2183768) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2183768 13100062 DAMO_2539 Candidatus Methylomirabilis oxyfera membrane protein YP_003207413.1 2182332 R 671143 CDS YP_003207414.1 392375581 13097661 complement(2183765..2186878) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; Multidrug efflux transporter, AcrB/AcrD/AcrF family protein 2186878 13097661 DAMO_2540 Candidatus Methylomirabilis oxyfera Multidrug efflux transporter, AcrB/AcrD/AcrF family protein YP_003207414.1 2183765 R 671143 CDS YP_003207415.1 392375582 13100079 complement(2186994..2188241) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2188241 13100079 DAMO_2541 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207415.1 2186994 R 671143 CDS YP_003207416.1 392375583 13097662 complement(2188389..2188775) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2188775 13097662 DAMO_2542 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207416.1 2188389 R 671143 CDS YP_003207417.1 392375584 13098540 2188732..2188935 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2188935 13098540 DAMO_2543 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207417.1 2188732 D 671143 CDS YP_003207418.1 392375585 13097663 complement(2188917..2190026) 1 NC_013260.1 phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) 2190026 purM 13097663 purM Candidatus Methylomirabilis oxyfera phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) YP_003207418.1 2188917 R 671143 CDS YP_003207419.1 392375586 13097664 complement(2190083..2191375) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2191375 13097664 DAMO_2545 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207419.1 2190083 R 671143 CDS YP_003207420.1 392375587 13097665 2191642..2191866 1 NC_013260.1 hypothetical protein 2191866 13097665 DAMO_2546 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207420.1 2191642 D 671143 CDS YP_003207421.1 392375588 13097666 2191866..2192105 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2192105 13097666 DAMO_2547 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207421.1 2191866 D 671143 CDS YP_003207422.1 392375589 13097667 2192428..2192652 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2192652 13097667 DAMO_2548 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207422.1 2192428 D 671143 CDS YP_003207423.1 392375590 13097668 2192639..2193040 1 NC_013260.1 hypothetical protein 2193040 13097668 DAMO_2549 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207423.1 2192639 D 671143 CDS YP_003207424.1 392375591 13097669 2193305..2193616 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2193616 13097669 DAMO_2550 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207424.1 2193305 D 671143 CDS YP_003207425.1 392375592 13097671 complement(2193578..2194465) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1444364; Product type e : enzyme; 3-hydroxybutyryl-CoA dehydrogenase 2194465 hbdA 13097671 hbdA Candidatus Methylomirabilis oxyfera 3-hydroxybutyryl-CoA dehydrogenase YP_003207425.1 2193578 R 671143 CDS YP_003207426.1 392375593 13098693 complement(2194481..2195752) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; polynucleotide enzyme with nucleotide triphosphate hydrolase domain 2195752 rarA 13098693 rarA Candidatus Methylomirabilis oxyfera polynucleotide enzyme with nucleotide triphosphate hydrolase domain YP_003207426.1 2194481 R 671143 CDS YP_003207427.1 392375594 13097672 complement(2195802..2196530) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10972799, 11251836; Product type e : enzyme; Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) 2196530 pyrF 13097672 pyrF Candidatus Methylomirabilis oxyfera Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) YP_003207427.1 2195802 R 671143 CDS YP_003207428.1 392375595 13097673 2196669..2197928 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2197928 13097673 DAMO_2554 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207428.1 2196669 D 671143 CDS YP_003207429.1 392375596 13097674 complement(2198067..2198462) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2198462 13097674 DAMO_2555 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207429.1 2198067 R 671143 CDS YP_003207430.1 392375597 13097675 complement(2198314..2198514) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2198514 13097675 DAMO_2556 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207430.1 2198314 R 671143 CDS YP_003207431.1 392375598 13097676 complement(2198524..2198754) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2198754 13097676 DAMO_2557 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207431.1 2198524 R 671143 CDS YP_003207432.1 392375599 13097677 complement(2198640..2200106) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1644773, 3097003; Product type e : enzyme; glycogen synthase 2200106 glgA 13097677 glgA Candidatus Methylomirabilis oxyfera glycogen synthase YP_003207432.1 2198640 R 671143 CDS YP_003207433.1 392375600 13099856 complement(2200103..2200288) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2200288 13099856 DAMO_2559 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207433.1 2200103 R 671143 CDS YP_003207434.1 392375601 13098701 complement(2200568..2200774) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2200774 13098701 DAMO_2560 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207434.1 2200568 R 671143 CDS YP_003207435.1 392375602 13097678 complement(2201059..2201532) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10393194; Product type f : factor; trans-translation protein, binds tmRNA and tRNA (SsrA-binding protein) 2201532 smpB 13097678 smpB Candidatus Methylomirabilis oxyfera trans-translation protein, binds tmRNA and tRNA (SsrA-binding protein) YP_003207435.1 2201059 R 671143 CDS YP_003207436.1 392375603 13097679 2201825..2202097 1 NC_013260.1 DNA-binding protein HU-beta 2202097 hupB 13097679 hupB Candidatus Methylomirabilis oxyfera DNA-binding protein HU-beta YP_003207436.1 2201825 D 671143 CDS YP_003207437.1 392375604 13097680 complement(2202342..2202869) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2202869 13097680 DAMO_2563 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207437.1 2202342 R 671143 CDS YP_003207438.1 392375605 13097681 complement(2202879..2203448) 1 NC_013260.1 thiamine-phosphate pyrophosphorylase 2203448 13097681 DAMO_2564 Candidatus Methylomirabilis oxyfera thiamine-phosphate pyrophosphorylase YP_003207438.1 2202879 R 671143 CDS YP_003207439.1 392375606 13100244 complement(2203608..2204417) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8432721; Product type e : enzyme; thiamine biosynthesis protein ThiG 2204417 thiG 13100244 thiG Candidatus Methylomirabilis oxyfera thiamine biosynthesis protein ThiG YP_003207439.1 2203608 R 671143 CDS YP_003207440.1 392375607 13097682 complement(2204414..2204620) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type f : factor; thiamine biosynthesis protein ThiS 2204620 thiS 13097682 thiS Candidatus Methylomirabilis oxyfera thiamine biosynthesis protein ThiS YP_003207440.1 2204414 R 671143 CDS YP_003207441.1 392375608 13099855 complement(2204789..2205592) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; enoyl-CoA hydratase 2205592 13099855 DAMO_2567 Candidatus Methylomirabilis oxyfera enoyl-CoA hydratase YP_003207441.1 2204789 R 671143 CDS YP_003207442.1 392375609 13099854 complement(2205668..2206423) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2206423 13099854 DAMO_2568 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207442.1 2205668 R 671143 CDS YP_003207443.1 392375610 13097683 complement(2206612..2207817) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2207817 13097683 DAMO_2569 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207443.1 2206612 R 671143 CDS YP_003207444.1 392375611 13098817 complement(2207861..2208742) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2208742 13098817 DAMO_2570 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207444.1 2207861 R 671143 CDS YP_003207445.1 392375612 13098458 2208627..2208794 1 NC_013260.1 hypothetical protein 2208794 13098458 DAMO_2571 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207445.1 2208627 D 671143 CDS YP_003207446.1 392375613 13097684 2209082..2209363 1 NC_013260.1 type I antifreeze protein 2209363 13097684 DAMO_2572 Candidatus Methylomirabilis oxyfera type I antifreeze protein YP_003207446.1 2209082 D 671143 CDS YP_003207447.1 392375614 13097685 complement(2209249..2209356) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2209356 13097685 DAMO_2573 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207447.1 2209249 R 671143 CDS YP_003207448.1 392375615 13098841 complement(2209425..2210207) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2210207 13098841 DAMO_2574 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207448.1 2209425 R 671143 CDS YP_003207449.1 392375616 13098844 complement(2210237..2211514) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) 2211514 13098844 DAMO_2575 Candidatus Methylomirabilis oxyfera 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) YP_003207449.1 2210237 R 671143 CDS YP_003207450.1 392375617 13097686 complement(2211532..2212143) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; molybdopterin-guanine dinucleotide biosynthesis protein A 2212143 mobA 13097686 mobA Candidatus Methylomirabilis oxyfera molybdopterin-guanine dinucleotide biosynthesis protein A YP_003207450.1 2211532 R 671143 CDS YP_003207451.1 392375618 13097687 complement(2212146..2212592) 1 NC_013260.1 DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (Transcriptase subunit omega) (RNA polymerase omega subunit) 2212592 13097687 DAMO_2577 Candidatus Methylomirabilis oxyfera DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (Transcriptase subunit omega) (RNA polymerase omega subunit) YP_003207451.1 2212146 R 671143 CDS YP_003207452.1 392375619 13097688 complement(2212611..2213219) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; guanylate kinase 2213219 gmk 13097688 gmk Candidatus Methylomirabilis oxyfera guanylate kinase YP_003207452.1 2212611 R 671143 CDS YP_003207453.1 392375620 13097689 complement(2213216..2213500) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2213500 13097689 DAMO_2579 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207453.1 2213216 R 671143 CDS YP_003207454.1 392375621 13097690 complement(2213513..2214394) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2214394 13097690 DAMO_2580 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207454.1 2213513 R 671143 CDS YP_003207455.1 392375622 13097691 complement(2214619..2216253) 1 NC_013260.1 DNA mismatch repair protein MutS-like protein 2216253 13097691 DAMO_2581 Candidatus Methylomirabilis oxyfera DNA mismatch repair protein MutS-like protein YP_003207455.1 2214619 R 671143 CDS YP_003207456.1 392375623 13097692 2216563..2216850 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2216850 13097692 DAMO_2582 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207456.1 2216563 D 671143 CDS YP_003207457.1 392375624 13097693 2216834..2217103 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2217103 13097693 DAMO_2583 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207457.1 2216834 D 671143 CDS YP_003207458.1 392375625 13097694 2217139..2217381 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2217381 13097694 DAMO_2584 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207458.1 2217139 D 671143 CDS YP_003207459.1 392375626 13098547 2217473..2217808 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2217808 13098547 DAMO_2585 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207459.1 2217473 D 671143 CDS YP_003207460.1 392375627 13097695 complement(2217877..2218737) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; formyltetrahydrofolate deformylase (Formyl-H(4)F hydrolase) (purU) 2218737 13097695 DAMO_2586 Candidatus Methylomirabilis oxyfera formyltetrahydrofolate deformylase (Formyl-H(4)F hydrolase) (purU) YP_003207460.1 2217877 R 671143 CDS YP_003207461.1 392375628 13098411 complement(2218952..2220454) 1 NC_013260.1 glutamate synthase (NADPH) 2220454 13098411 DAMO_2587 Candidatus Methylomirabilis oxyfera glutamate synthase (NADPH) YP_003207461.1 2218952 R 671143 CDS YP_003207462.1 392375629 13097696 complement(2220470..2222116) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; dihydroorotate dehydrogenase electron transfer subunit 2222116 13097696 DAMO_2588 Candidatus Methylomirabilis oxyfera dihydroorotate dehydrogenase electron transfer subunit YP_003207462.1 2220470 R 671143 CDS YP_003207463.1 392375630 13097697 2222449..2223165 1 NC_013260.1 type 11 methyltransferase 2223165 13097697 DAMO_2589 Candidatus Methylomirabilis oxyfera type 11 methyltransferase YP_003207463.1 2222449 D 671143 CDS YP_003207464.1 392375631 13097698 2223350..2223817 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2223817 13097698 DAMO_2590 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207464.1 2223350 D 671143 CDS YP_003207465.1 392375632 13097699 2223939..2225210 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2225210 13097699 DAMO_2591 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207465.1 2223939 D 671143 CDS YP_003207466.1 392375633 13097700 2225301..2226185 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2226185 13097700 DAMO_2592 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207466.1 2225301 D 671143 CDS YP_003207467.1 392375634 13097701 2226223..2227938 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 2227938 13097701 DAMO_2593 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003207467.1 2226223 D 671143 CDS YP_003207468.1 392375635 13097702 2227935..2228306 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; response regulator in two-component regulatory system (CheY-like protein) 2228306 13097702 DAMO_2594 Candidatus Methylomirabilis oxyfera response regulator in two-component regulatory system (CheY-like protein) YP_003207468.1 2227935 D 671143 CDS YP_003207469.1 392375636 13097703 2228391..2229776 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8226691, 8412694; Product type pr : putative regulator; DNA-binding response regulator in two-component system 2229776 yfhA 13097703 yfhA Candidatus Methylomirabilis oxyfera DNA-binding response regulator in two-component system YP_003207469.1 2228391 D 671143 CDS YP_003207470.1 392375637 13097704 complement(2230113..2230304) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2230304 13097704 DAMO_2596 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207470.1 2230113 R 671143 CDS YP_003207471.1 392375638 13097705 complement(2230500..2230757) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2230757 13097705 DAMO_2597 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207471.1 2230500 R 671143 CDS YP_003207472.1 392375639 13097706 2231009..2231971 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 11320134; Product type e : enzyme; quinolinate synthetase A 2231971 nadA 13097706 nadA Candidatus Methylomirabilis oxyfera quinolinate synthetase A YP_003207472.1 2231009 D 671143 CDS YP_003207473.1 392375640 13097707 2231993..2232856 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 8419294, 8561507; Product type e : enzyme; quinolinate phosphoribosyltransferase (nicotinate-nucleotide pyrophosphorylase) 2232856 nadC 13097707 nadC Candidatus Methylomirabilis oxyfera quinolinate phosphoribosyltransferase (nicotinate-nucleotide pyrophosphorylase) YP_003207473.1 2231993 D 671143 CDS YP_003207474.1 392375641 13097708 2232853..2234406 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 10425677, 2187483; Product type e : enzyme; L-aspartate oxidase 2234406 nadB 13097708 nadB Candidatus Methylomirabilis oxyfera L-aspartate oxidase YP_003207474.1 2232853 D 671143 CDS YP_003207475.1 392375642 13097709 2234500..2235531 1 NC_013260.1 alcohol dehydrogenase 2235531 13097709 DAMO_2601 Candidatus Methylomirabilis oxyfera alcohol dehydrogenase YP_003207475.1 2234500 D 671143 CDS YP_003207476.1 392375643 13097710 2235568..2236335 1 NC_013260.1 glycerophosphodiester phosphodiesterase 2236335 13097710 DAMO_2602 Candidatus Methylomirabilis oxyfera glycerophosphodiester phosphodiesterase YP_003207476.1 2235568 D 671143 CDS YP_003207477.1 392375644 13097711 complement(2236307..2236621) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2236621 13097711 DAMO_2603 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207477.1 2236307 R 671143 CDS YP_003207478.1 392375645 13098900 2236786..2238543 1 NC_013260.1 Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) 2238543 lcfA 13098900 lcfA Candidatus Methylomirabilis oxyfera Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) YP_003207478.1 2236786 D 671143 CDS YP_003207479.1 392375646 13097712 2238596..2241502 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Protein export membrane protein, SecD/SecF family 2241502 13097712 DAMO_2605 Candidatus Methylomirabilis oxyfera Protein export membrane protein, SecD/SecF family YP_003207479.1 2238596 D 671143 CDS YP_003207480.1 392375647 13097713 2241528..2242160 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2242160 13097713 DAMO_2606 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207480.1 2241528 D 671143 CDS YP_003207481.1 392375648 13098584 complement(2242195..2243568) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; inositol-3-phosphate synthase 2243568 13098584 DAMO_2607 Candidatus Methylomirabilis oxyfera inositol-3-phosphate synthase YP_003207481.1 2242195 R 671143 CDS YP_003207482.1 392375649 13098586 complement(2243565..2244764) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2244764 13098586 DAMO_2608 Candidatus Methylomirabilis oxyfera membrane protein YP_003207482.1 2243565 R 671143 CDS YP_003207483.1 392375650 13098585 complement(2244786..2245868) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Oxidoreductase domain protein 2245868 13098585 DAMO_2609 Candidatus Methylomirabilis oxyfera Oxidoreductase domain protein YP_003207483.1 2244786 R 671143 CDS YP_003207484.1 392375651 13097714 complement(2245948..2247309) 1 NC_013260.1 aminotransferase 2247309 13097714 DAMO_2610 Candidatus Methylomirabilis oxyfera aminotransferase YP_003207484.1 2245948 R 671143 CDS YP_003207485.1 392375652 13097715 complement(2247270..2248142) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2248142 13097715 DAMO_2611 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207485.1 2247270 R 671143 CDS YP_003207486.1 392375653 13097716 complement(2248254..2248892) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Nucleotidyl transferase 2248892 13097716 DAMO_2612 Candidatus Methylomirabilis oxyfera Nucleotidyl transferase YP_003207486.1 2248254 R 671143 CDS YP_003207487.1 392375654 13098497 complement(2248967..2249659) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; HAD-superfamily hydrolase, subfamily IA, variant 3 2249659 13098497 DAMO_2613 Candidatus Methylomirabilis oxyfera HAD-superfamily hydrolase, subfamily IA, variant 3 YP_003207487.1 2248967 R 671143 CDS YP_003207488.1 392375655 13097717 complement(2249656..2250672) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2250672 13097717 DAMO_2614 Candidatus Methylomirabilis oxyfera membrane protein YP_003207488.1 2249656 R 671143 CDS YP_003207489.1 392375656 13097718 complement(2250713..2252266) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2252266 13097718 DAMO_2615 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207489.1 2250713 R 671143 CDS YP_003207490.1 392375657 13097719 complement(2252320..2253888) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2253888 13097719 DAMO_2616 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207490.1 2252320 R 671143 CDS YP_003207491.1 392375658 13097720 complement(2254022..2254615) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2254615 13097720 DAMO_2617 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207491.1 2254022 R 671143 CDS YP_003207492.1 392375659 13097721 complement(2254599..2255939) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; competence-damage inducible protein 2255939 cinA 13097721 cinA Candidatus Methylomirabilis oxyfera competence-damage inducible protein YP_003207492.1 2254599 R 671143 CDS YP_003207493.1 392375660 13097722 complement(2255933..2257195) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Diguanylate kinase 2257195 13097722 DAMO_2619 Candidatus Methylomirabilis oxyfera Diguanylate kinase YP_003207493.1 2255933 R 671143 CDS YP_003207494.1 392375661 13097723 complement(2257291..2257782) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2257782 13097723 DAMO_2620 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207494.1 2257291 R 671143 CDS YP_003207495.1 392375662 13097724 complement(2257801..2258523) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Outer-membrane lipoprotein carrier protein 2258523 13097724 DAMO_2621 Candidatus Methylomirabilis oxyfera Outer-membrane lipoprotein carrier protein YP_003207495.1 2257801 R 671143 CDS YP_003207496.1 392375663 13097725 complement(2258510..2260801) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11832210; Product type ph : phenotype; DNA translocase 2260801 ftsK 13097725 ftsK Candidatus Methylomirabilis oxyfera DNA translocase YP_003207496.1 2258510 R 671143 CDS YP_003207497.1 392375664 13097726 complement(2260817..2262463) 1 NC_013260.1 ribonuclease J 1 (RNase J1) 2262463 rnjA 13097726 rnjA Candidatus Methylomirabilis oxyfera ribonuclease J 1 (RNase J1) YP_003207497.1 2260817 R 671143 CDS YP_003207498.1 392375665 13097727 complement(2262474..2265044) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10762258; Product type e : enzyme; ATP-dependent protease La 2265044 lon 13097727 lon Candidatus Methylomirabilis oxyfera ATP-dependent protease La YP_003207498.1 2262474 R 671143 CDS YP_003207499.1 392375666 13097728 complement(2265091..2265996) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; glucose-1-phosphate uridylyltransferase 2265996 galU 13097728 galU Candidatus Methylomirabilis oxyfera glucose-1-phosphate uridylyltransferase YP_003207499.1 2265091 R 671143 CDS YP_003207500.1 392375667 13097729 2266483..2267232 1 NC_013260.1 OmpA/MotB 2267232 13097729 DAMO_2626 Candidatus Methylomirabilis oxyfera OmpA/MotB YP_003207500.1 2266483 D 671143 CDS YP_003207501.1 392375668 13100045 2267120..2267422 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2267422 13100045 DAMO_2627 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207501.1 2267120 D 671143 CDS YP_003207502.1 392375669 13097730 2267519..2268106 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2268106 13097730 DAMO_2628 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207502.1 2267519 D 671143 CDS YP_003207503.1 392375670 13097731 2268189..2268932 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 9658016; Product type t : transporter; toluene ABC transporter subunit membrane protein 2268932 yrbE 13097731 yrbE Candidatus Methylomirabilis oxyfera toluene ABC transporter subunit membrane protein YP_003207503.1 2268189 D 671143 CDS YP_003207504.1 392375671 13097732 2268934..2269674 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter ATP-binding protein 2269674 13097732 DAMO_2630 Candidatus Methylomirabilis oxyfera ABC transporter ATP-binding protein YP_003207504.1 2268934 D 671143 CDS YP_003207505.1 392375672 13100228 2269751..2270710 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Mce family protein 2270710 13100228 DAMO_2631 Candidatus Methylomirabilis oxyfera Mce family protein YP_003207505.1 2269751 D 671143 CDS YP_003207506.1 392375673 13098739 2270707..2273190 1 NC_013260.1 glycoside hydrolase, family 57 2273190 13098739 DAMO_2632 Candidatus Methylomirabilis oxyfera glycoside hydrolase, family 57 YP_003207506.1 2270707 D 671143 CDS YP_003207507.1 392375674 13098515 2273253..2274575 1 NC_013260.1 hypothetical protein 2274575 13098515 DAMO_2633 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207507.1 2273253 D 671143 CDS YP_003207508.1 392375675 13100235 2274590..2274889 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2274889 13100235 DAMO_2634 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207508.1 2274590 D 671143 CDS YP_003207509.1 392375676 13097733 2275053..2275826 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2275826 13097733 DAMO_2635 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207509.1 2275053 D 671143 CDS YP_003207510.1 392375677 13097734 2275889..2276161 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2276161 13097734 DAMO_2636 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207510.1 2275889 D 671143 CDS YP_003207511.1 392375678 13097735 2276218..2277543 1 NC_013260.1 Guanine deaminase 2277543 13097735 DAMO_2637 Candidatus Methylomirabilis oxyfera Guanine deaminase YP_003207511.1 2276218 D 671143 CDS YP_003207512.1 392375679 13098911 complement(2277602..2278774) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2278774 13098911 DAMO_2638 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207512.1 2277602 R 671143 CDS YP_003207513.1 392375680 13097736 complement(2278839..2279033) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2279033 13097736 DAMO_2639 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207513.1 2278839 R 671143 CDS YP_003207514.1 392375681 13097737 complement(2279049..2279252) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2279252 13097737 DAMO_2640 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207514.1 2279049 R 671143 CDS YP_003207515.1 392375682 13097738 complement(2279253..2279435) 1 NC_013260.1 hypothetical protein 2279435 13097738 DAMO_2641 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207515.1 2279253 R 671143 CDS YP_003207516.1 392375683 13097739 complement(2279438..2279782) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2279782 13097739 DAMO_2642 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207516.1 2279438 R 671143 CDS YP_003207517.1 392375684 13097740 2279782..2279988 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2279988 13097740 DAMO_2643 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207517.1 2279782 D 671143 CDS YP_003207518.1 392375685 13097741 2280132..2281034 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glycine tRNA synthetase subunit alpha 2281034 glyQ 13097741 glyQ Candidatus Methylomirabilis oxyfera glycine tRNA synthetase subunit alpha YP_003207518.1 2280132 D 671143 CDS YP_003207519.1 392375686 13097742 2281059..2283128 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glycine tRNA synthetase subunit beta 2283128 glyS 13097742 glyS Candidatus Methylomirabilis oxyfera glycine tRNA synthetase subunit beta YP_003207519.1 2281059 D 671143 CDS YP_003207520.1 392375687 13097743 2283243..2283893 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Orotate phosphoribosyltransferase (OPRT) (OPRTase) 2283893 13097743 DAMO_2646 Candidatus Methylomirabilis oxyfera Orotate phosphoribosyltransferase (OPRT) (OPRTase) YP_003207520.1 2283243 D 671143 CDS YP_003207521.1 392375688 13097744 2283806..2284324 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2284324 13097744 DAMO_2647 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207521.1 2283806 D 671143 CDS YP_003207522.1 392375689 13097745 2284359..2285087 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2285087 13097745 DAMO_2648 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207522.1 2284359 D 671143 CDS YP_003207523.1 392375690 13097746 complement(2285158..2285529) 1 NC_013260.1 transcriptional coactivator/pterin dehydratase 2285529 13097746 DAMO_2649 Candidatus Methylomirabilis oxyfera transcriptional coactivator/pterin dehydratase YP_003207523.1 2285158 R 671143 CDS YP_003207524.1 392375691 13097747 complement(2285767..2286780) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; fructose 1,6-bisphosphatase II 2286780 glpX 13097747 glpX Candidatus Methylomirabilis oxyfera fructose 1,6-bisphosphatase II YP_003207524.1 2285767 R 671143 CDS YP_003207525.1 392375692 13097748 complement(2286881..2288890) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; transketolase (TK) 2288890 cbbT 13097748 cbbT Candidatus Methylomirabilis oxyfera transketolase (TK) YP_003207525.1 2286881 R 671143 CDS YP_003207526.1 392375693 13097749 complement(2289011..2290069) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; glyceraldehyde-3-phosphate dehydrogenase 2290069 cbbG 13097749 cbbG Candidatus Methylomirabilis oxyfera glyceraldehyde-3-phosphate dehydrogenase YP_003207526.1 2289011 R 671143 CDS YP_003207527.1 392375694 13098406 complement(2290073..2291059) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Phosphoribulokinase/uridine kinase family 2291059 13098406 DAMO_2653 Candidatus Methylomirabilis oxyfera Phosphoribulokinase/uridine kinase family YP_003207527.1 2290073 R 671143 CDS YP_003207528.1 392375695 13098407 complement(2291141..2291335) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2291335 13098407 DAMO_2654 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207528.1 2291141 R 671143 CDS YP_003207529.1 392375696 13097750 2291356..2291844 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 6-pyruvoyl tetrahydropterin synthase 2291844 pts 13097750 pts Candidatus Methylomirabilis oxyfera 6-pyruvoyl tetrahydropterin synthase YP_003207529.1 2291356 D 671143 CDS YP_003207530.1 392375697 13097751 complement(2291841..2292584) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; histidine biosynthesis protein 2292584 13097751 DAMO_2656 Candidatus Methylomirabilis oxyfera histidine biosynthesis protein YP_003207530.1 2291841 R 671143 CDS YP_003207531.1 392375698 13097752 2292609..2293658 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2293658 13097752 DAMO_2657 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207531.1 2292609 D 671143 CDS YP_003207532.1 392375699 13099036 2293655..2294689 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; tetrahydromethanopterin biosynthesis protein 2294689 13099036 DAMO_2658 Candidatus Methylomirabilis oxyfera tetrahydromethanopterin biosynthesis protein YP_003207532.1 2293655 D 671143 CDS YP_003207533.1 392375700 13098400 2294749..2296989 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; adoMet-dependent methyltransferase 2296989 ycbY 13098400 ycbY Candidatus Methylomirabilis oxyfera adoMet-dependent methyltransferase YP_003207533.1 2294749 D 671143 CDS YP_003207534.1 392375701 13100033 complement(2297055..2298017) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2298017 13100033 DAMO_2660 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207534.1 2297055 R 671143 CDS YP_003207535.1 392375702 13100027 2298109..2298312 1 NC_013260.1 transposase 2298312 tISRso 13100027 tISRso Candidatus Methylomirabilis oxyfera transposase YP_003207535.1 2298109 D 671143 CDS YP_003207536.1 392375703 13099037 complement(2298309..2299877) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2299877 13099037 DAMO_2662 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207536.1 2298309 R 671143 CDS YP_003207537.1 392375704 13099038 2299941..2300249 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2300249 13099038 DAMO_2663 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207537.1 2299941 D 671143 CDS YP_003207538.1 392375705 13098685 complement(2300633..2301469) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Yga2E 2301469 13098685 DAMO_2664 Candidatus Methylomirabilis oxyfera Yga2E YP_003207538.1 2300633 R 671143 CDS YP_003207539.1 392375706 13099039 complement(2301459..2301704) 1 NC_013260.1 Cro/CI family transcriptional regulator 2301704 13099039 DAMO_2665 Candidatus Methylomirabilis oxyfera Cro/CI family transcriptional regulator YP_003207539.1 2301459 R 671143 CDS YP_003207540.1 392375707 13099040 complement(2301743..2301958) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2301958 13099040 DAMO_2666 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207540.1 2301743 R 671143 CDS YP_003207541.1 392375708 13099041 2301761..2302654 1 NC_013260.1 DNA adenine methylase Dam 2302654 13099041 DAMO_2668 Candidatus Methylomirabilis oxyfera DNA adenine methylase Dam YP_003207541.1 2301761 D 671143 CDS YP_003207542.1 392375709 13098894 complement(2301977..2302231) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2302231 13098894 DAMO_2667 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207542.1 2301977 R 671143 CDS YP_003207543.1 392375710 13099042 complement(2302644..2302856) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2302856 13099042 DAMO_2669 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207543.1 2302644 R 671143 CDS YP_003207544.1 392375711 13098849 complement(2303123..2303854) 1 NC_013260.1 hypothetical protein 2303854 13098849 DAMO_2670 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207544.1 2303123 R 671143 CDS YP_003207545.1 392375712 13099043 complement(2303848..2305104) 1 NC_013260.1 hypothetical protein 2305104 13099043 DAMO_2671 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207545.1 2303848 R 671143 CDS YP_003207546.1 392375713 13099044 2305205..2305441 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2305441 13099044 DAMO_2672 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207546.1 2305205 D 671143 CDS YP_003207547.1 392375714 13099045 2305564..2306244 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Delta 1-pyrroline-5-carboxylate synthetase 2306244 13099045 DAMO_2673 Candidatus Methylomirabilis oxyfera Delta 1-pyrroline-5-carboxylate synthetase YP_003207547.1 2305564 D 671143 CDS YP_003207548.1 392375715 13099046 complement(2306260..2306970) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2306970 13099046 DAMO_2674 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207548.1 2306260 R 671143 CDS YP_003207549.1 392375716 13099047 2307109..2307354 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2307354 13099047 DAMO_2675 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207549.1 2307109 D 671143 CDS YP_003207550.1 392375717 13099049 2307351..2307785 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2307785 13099049 DAMO_2676 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207550.1 2307351 D 671143 CDS YP_003207551.1 392375718 13099048 complement(2307570..2307878) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2307878 13099048 DAMO_2677 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207551.1 2307570 R 671143 CDS YP_003207552.1 392375719 13099050 2307852..2308115 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2308115 13099050 DAMO_2679 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207552.1 2307852 D 671143 CDS YP_003207553.1 392375720 13099051 complement(2307879..2308628) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2308628 13099051 DAMO_2678 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207553.1 2307879 R 671143 CDS YP_003207554.1 392375721 13099052 complement(2308628..2308963) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2308963 13099052 DAMO_2680 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207554.1 2308628 R 671143 CDS YP_003207555.1 392375722 13099053 2309095..2309283 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2309283 13099053 DAMO_2681 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207555.1 2309095 D 671143 CDS YP_003207556.1 392375723 13099054 2309323..2310768 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2310768 13099054 DAMO_2682 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207556.1 2309323 D 671143 CDS YP_003207557.1 392375724 13099055 2310836..2311018 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2311018 13099055 DAMO_2683 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207557.1 2310836 D 671143 CDS YP_003207558.1 392375725 13099056 2311088..2311339 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2311339 13099056 DAMO_2684 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207558.1 2311088 D 671143 CDS YP_003207559.1 392375726 13099057 2311364..2311753 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2311753 13099057 DAMO_2685 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207559.1 2311364 D 671143 CDS YP_003207560.1 392375727 13099058 complement(2311849..2312163) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2312163 13099058 DAMO_2686 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207560.1 2311849 R 671143 CDS YP_003207561.1 392375728 13099060 complement(2312165..2312443) 1 NC_013260.1 prevent-host-death protein 2312443 13099060 DAMO_2687 Candidatus Methylomirabilis oxyfera prevent-host-death protein YP_003207561.1 2312165 R 671143 CDS YP_003207562.1 392375729 13099059 complement(2312313..2312522) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 2312522 13099059 DAMO_2688 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207562.1 2312313 R 671143 CDS YP_003207563.1 392375730 13099061 complement(2312568..2313218) 1 NC_013260.1 redox-sensing transcriptional repressor rex 2313218 rex 13099061 rex Candidatus Methylomirabilis oxyfera redox-sensing transcriptional repressor rex YP_003207563.1 2312568 R 671143 CDS YP_003207564.1 392375731 13099062 complement(2313233..2314735) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) 2314735 nuoN 13099062 nuoN Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) YP_003207564.1 2313233 R 671143 CDS YP_003207565.1 392375732 13099063 complement(2314735..2316354) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) 2316354 nuoM 13099063 nuoM Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) YP_003207565.1 2314735 R 671143 CDS YP_003207566.1 392375733 13099064 complement(2316370..2318262) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit L (NADH dehydrogenase I, chain L) (NDH-1, chain L) 2318262 nuoL 13099064 nuoL Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit L (NADH dehydrogenase I, chain L) (NDH-1, chain L) YP_003207566.1 2316370 R 671143 CDS YP_003207567.1 392375734 13099065 complement(2318328..2318639) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) 2318639 nuoK 13099065 nuoK Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) YP_003207567.1 2318328 R 671143 CDS YP_003207568.1 392375735 13099066 complement(2318813..2319319) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit J (NADH dehydrogenase I, chain J) (NDH-1, chain J) 2319319 nuoJ 13099066 nuoJ Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit J (NADH dehydrogenase I, chain J) (NDH-1, chain J) YP_003207568.1 2318813 R 671143 CDS YP_003207569.1 392375736 13099067 complement(2319322..2320308) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) 2320308 nuoH 13099067 nuoH Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) YP_003207569.1 2319322 R 671143 CDS YP_003207570.1 392375737 13099068 complement(2320385..2321668) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I, chain F) (NDH-1, chain F) 2321668 nuoF 13099068 nuoF Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I, chain F) (NDH-1, chain F) YP_003207570.1 2320385 R 671143 CDS YP_003207571.1 392375738 13099069 complement(2321706..2322221) 1 NC_013260.1 NADH-quinone oxidoreductase subunit E 2 (NADH dehydrogenase I subunit E 2) (NDH-1 subunit E 2) 2322221 nuoE 13099069 nuoE Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit E 2 (NADH dehydrogenase I subunit E 2) (NDH-1 subunit E 2) YP_003207571.1 2321706 R 671143 CDS YP_003207572.1 392375739 13098722 complement(2322322..2323494) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) 2323494 nuoD 13098722 nuoD Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) YP_003207572.1 2322322 R 671143 CDS YP_003207573.1 392375740 13098622 complement(2323487..2323993) 1 NC_013260.1 NADH-quinone oxidoreductase 2323993 13098622 DAMO_2699 Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase YP_003207573.1 2323487 R 671143 CDS YP_003207574.1 392375741 13098620 complement(2323981..2324340) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 7730262; Product type e : enzyme; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) 2324340 nuoA 13098620 nuoA Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) YP_003207574.1 2323981 R 671143 CDS YP_003207575.1 392375742 13098618 complement(2324390..2324770) 1 NC_013260.1 ATP synthase subunit C, membrane-bound, F0 sector; DCCD-binding 2324770 13098618 DAMO_2701 Candidatus Methylomirabilis oxyfera ATP synthase subunit C, membrane-bound, F0 sector; DCCD-binding YP_003207575.1 2324390 R 671143 CDS YP_003207576.1 392375743 13098616 complement(2324809..2325528) 1 NC_013260.1 ATP synthase subunit A 2325528 13098616 DAMO_2702 Candidatus Methylomirabilis oxyfera ATP synthase subunit A YP_003207576.1 2324809 R 671143 CDS YP_003207577.1 392375744 13098615 complement(2325578..2325793) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2325793 13098615 DAMO_2703 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207577.1 2325578 R 671143 CDS YP_003207578.1 392375745 13098613 complement(2325924..2327375) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) 2327375 nuoN 13098613 nuoN Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) YP_003207578.1 2325924 R 671143 CDS YP_003207579.1 392375746 13098612 complement(2327372..2329036) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) 2329036 nuoM 13098612 nuoM Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) YP_003207579.1 2327372 R 671143 CDS YP_003207580.1 392375747 13098611 complement(2329149..2331185) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit L (NADH dehydrogenase I, chain L) (NDH-1, chain L) 2331185 nuoL 13098611 nuoL Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit L (NADH dehydrogenase I, chain L) (NDH-1, chain L) YP_003207580.1 2329149 R 671143 CDS YP_003207581.1 392375748 13098609 complement(2331238..2331546) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) 2331546 nuoK 13098609 nuoK Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) YP_003207581.1 2331238 R 671143 CDS YP_003207582.1 392375749 13099070 complement(2331550..2332062) 1 NC_013260.1 NAD(P)H-quinone oxidoreductase subunit 6 (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) 2332062 ndhG 13099070 ndhG Candidatus Methylomirabilis oxyfera NAD(P)H-quinone oxidoreductase subunit 6 (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) YP_003207582.1 2331550 R 671143 CDS YP_003207583.1 392375750 13098607 complement(2331905..2333080) 1 NC_013260.1 NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) 2333080 13098607 DAMO_2709 Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) YP_003207583.1 2331905 R 671143 CDS YP_003207584.1 392375751 13099071 complement(2333168..2334301) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 9219542; Product type e : enzyme; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) 2334301 nuoD 13099071 nuoD Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) YP_003207584.1 2333168 R 671143 CDS YP_003207585.1 392375752 13099072 complement(2334327..2334791) 1 NC_013260.1 hypothetical protein 2334791 13099072 DAMO_2711 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207585.1 2334327 R 671143 CDS YP_003207586.1 392375753 13099073 complement(2334791..2335150) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12118882, 12923180, 12975362, 15175326, 15368583, 7565112, 7730262; Product type e : enzyme; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) 2335150 nuoA 13099073 nuoA Candidatus Methylomirabilis oxyfera NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) YP_003207586.1 2334791 R 671143 CDS YP_003207587.1 392375754 13098623 2335132..2335356 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2335356 13098623 DAMO_2713 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207587.1 2335132 D 671143 CDS YP_003207588.1 392375755 13098621 complement(2335396..2335749) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Cytochrome c heme-binding site 2335749 13098621 DAMO_2714 Candidatus Methylomirabilis oxyfera Cytochrome c heme-binding site YP_003207588.1 2335396 R 671143 CDS YP_003207589.1 392375756 13098619 complement(2335843..2337162) 1 NC_013260.1 glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) 2337162 hemL 13098619 hemL Candidatus Methylomirabilis oxyfera glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) YP_003207589.1 2335843 R 671143 CDS YP_003207590.1 392375757 13098617 complement(2337159..2338139) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11909869, 8226669; Product type e : enzyme; Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) 2338139 hemB 13098617 hemB Candidatus Methylomirabilis oxyfera Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) YP_003207590.1 2337159 R 671143 CDS YP_003207591.1 392375758 13098594 complement(2338229..2340526) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2340526 13098594 DAMO_2717 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207591.1 2338229 R 671143 CDS YP_003207592.1 392375759 13099074 complement(2340694..2340999) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2340999 13099074 DAMO_2718 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207592.1 2340694 R 671143 CDS YP_003207593.1 392375760 13098610 complement(2341145..2341261) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2341261 13098610 DAMO_2719 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207593.1 2341145 R 671143 CDS YP_003207594.1 392375761 13099075 complement(2341240..2341677) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2341677 13099075 DAMO_2720 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207594.1 2341240 R 671143 CDS YP_003207595.1 392375762 13098608 complement(2341674..2341961) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2341961 13098608 DAMO_2721 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207595.1 2341674 R 671143 CDS YP_003207596.1 392375763 13099076 2342185..2342436 1 NC_013260.1 hypothetical protein 2342436 13099076 DAMO_2722 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207596.1 2342185 D 671143 CDS YP_003207597.1 392375764 13099077 2342411..2342818 1 NC_013260.1 PilT-like protein protein 2342818 13099077 DAMO_2723 Candidatus Methylomirabilis oxyfera PilT-like protein protein YP_003207597.1 2342411 D 671143 CDS YP_003207598.1 392375765 13098428 2342448..2342960 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2342960 13098428 DAMO_2724 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207598.1 2342448 D 671143 CDS YP_003207599.1 392375766 13098426 2343066..2343293 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; transcriptional regulator, AbrB family 2343293 13098426 DAMO_2725 Candidatus Methylomirabilis oxyfera transcriptional regulator, AbrB family YP_003207599.1 2343066 D 671143 CDS YP_003207600.1 392375767 13099078 2343297..2343683 1 NC_013260.1 Death-on-curing family protein 2343683 13099078 DAMO_2726 Candidatus Methylomirabilis oxyfera Death-on-curing family protein YP_003207600.1 2343297 D 671143 CDS YP_003207601.1 392375768 13099079 2343966..2344202 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2344202 13099079 DAMO_2728 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207601.1 2343966 D 671143 CDS YP_003207602.1 392375769 13099080 2344171..2344419 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2344419 13099080 DAMO_2727 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207602.1 2344171 D 671143 CDS YP_003207603.1 392375770 13099081 complement(2344326..2344532) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2344532 13099081 DAMO_2729 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207603.1 2344326 R 671143 CDS YP_003207604.1 392375771 13099082 2344520..2344876 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2344876 13099082 DAMO_2730 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207604.1 2344520 D 671143 CDS YP_003207605.1 392375772 13099083 complement(2344910..2345068) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2345068 13099083 DAMO_2731 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207605.1 2344910 R 671143 CDS YP_003207606.1 392375773 13099084 2345398..2345586 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2345586 13099084 DAMO_2732 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207606.1 2345398 D 671143 CDS YP_003207607.1 392375774 13099085 complement(2345532..2345891) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2345891 13099085 DAMO_2733 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207607.1 2345532 R 671143 CDS YP_003207608.1 392375775 13099086 complement(2345951..2346241) 1 NC_013260.1 CRISPR-associated protein Cas2 2346241 13099086 DAMO_2734 Candidatus Methylomirabilis oxyfera CRISPR-associated protein Cas2 YP_003207608.1 2345951 R 671143 CDS YP_003207609.1 392375776 13099087 complement(2346245..2347882) 1 NC_013260.1 CRISPR-associated protein Cas1/Cas4 2347882 13099087 DAMO_2735 Candidatus Methylomirabilis oxyfera CRISPR-associated protein Cas1/Cas4 YP_003207609.1 2346245 R 671143 CDS YP_003207610.1 392375777 13099089 complement(2347958..2349583) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2349583 13099089 DAMO_2736 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207610.1 2347958 R 671143 CDS YP_003207611.1 392375778 13099088 complement(2349580..2350578) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2350578 13099088 DAMO_2737 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207611.1 2349580 R 671143 CDS YP_003207612.1 392375779 13099090 complement(2350595..2352754) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2352754 13099090 DAMO_2738 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207612.1 2350595 R 671143 CDS YP_003207613.1 392375780 13099091 complement(2352808..2355387) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2355387 13099091 DAMO_2739 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207613.1 2352808 R 671143 CDS YP_003207614.1 392375781 13099092 complement(2355507..2355740) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2355740 13099092 DAMO_2740 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207614.1 2355507 R 671143 CDS YP_003207615.1 392375782 13099093 2355872..2356099 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2356099 13099093 DAMO_2741 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207615.1 2355872 D 671143 CDS YP_003207616.1 392375783 13099094 2356099..2356533 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2356533 13099094 DAMO_2743 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207616.1 2356099 D 671143 CDS YP_003207617.1 392375784 13099095 complement(2356228..2356914) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2356914 13099095 DAMO_2742 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207617.1 2356228 R 671143 CDS YP_003207618.1 392375785 13099096 complement(2356728..2357342) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2357342 13099096 DAMO_2744 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207618.1 2356728 R 671143 CDS YP_003207619.1 392375786 13099097 2357921..2358082 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2358082 13099097 DAMO_2745 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207619.1 2357921 D 671143 CDS YP_003207620.1 392375787 13099098 2358079..2358513 1 NC_013260.1 hypothetical protein 2358513 13099098 DAMO_2746 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207620.1 2358079 D 671143 CDS YP_003207621.1 392375788 13099099 complement(2358587..2359576) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Helix-turn-helix, type 11 domain protein 2359576 13099099 DAMO_2747 Candidatus Methylomirabilis oxyfera Helix-turn-helix, type 11 domain protein YP_003207621.1 2358587 R 671143 CDS YP_003207622.1 392375789 13099100 complement(2359671..2360075) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2360075 13099100 DAMO_2748 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207622.1 2359671 R 671143 CDS YP_003207623.1 392375790 13099101 complement(2360106..2360312) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2360312 13099101 DAMO_2749 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207623.1 2360106 R 671143 CDS YP_003207624.1 392375791 13099102 complement(2360502..2362235) 1 NC_013260.1 phP C-terminal domain-containing protein 2362235 13099102 DAMO_2750 Candidatus Methylomirabilis oxyfera phP C-terminal domain-containing protein YP_003207624.1 2360502 R 671143 CDS YP_003207625.1 392375792 13099104 complement(2362330..2363253) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9068651; Product type e : enzyme; UDP-3-O-acyl N-acetylglucosamine deacetylase 2363253 lpxC 13099104 lpxC Candidatus Methylomirabilis oxyfera UDP-3-O-acyl N-acetylglucosamine deacetylase YP_003207625.1 2362330 R 671143 CDS YP_003207626.1 392375793 13099103 complement(2363375..2363863) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2363863 13099103 DAMO_2752 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207626.1 2363375 R 671143 CDS YP_003207627.1 392375794 13099105 complement(2363909..2364391) 1 NC_013260.1 RNase H 2364391 rnhA 13099105 rnhA Candidatus Methylomirabilis oxyfera RNase H YP_003207627.1 2363909 R 671143 CDS YP_003207628.1 392375795 13099106 complement(2364397..2365101) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2365101 13099106 DAMO_2754 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207628.1 2364397 R 671143 CDS YP_003207629.1 392375796 13099108 complement(2365352..2367316) 1 NC_013260.1 RNA polymerase sigma factor rpoD (Sigma-80) 2367316 rpoD 13099108 rpoD Candidatus Methylomirabilis oxyfera RNA polymerase sigma factor rpoD (Sigma-80) YP_003207629.1 2365352 R 671143 CDS YP_003207630.1 392375797 13099109 complement(2367389..2369233) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; DNA primase 2369233 13099109 DAMO_2756 Candidatus Methylomirabilis oxyfera DNA primase YP_003207630.1 2367389 R 671143 CDS YP_003207631.1 392375798 13099110 complement(2369205..2371619) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; MutS2 protein 2371619 13099110 DAMO_2757 Candidatus Methylomirabilis oxyfera MutS2 protein YP_003207631.1 2369205 R 671143 CDS YP_003207632.1 392375799 13099111 2371110..2371325 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2371325 13099111 DAMO_2758 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207632.1 2371110 D 671143 CDS YP_003207633.1 392375800 13098520 complement(2371757..2372209) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2372209 13098520 DAMO_2759 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207633.1 2371757 R 671143 CDS YP_003207634.1 392375801 13099112 complement(2372216..2372413) 1 NC_013260.1 30S ribosomal protein S21 2372413 rpsU 13099112 rpsU Candidatus Methylomirabilis oxyfera 30S ribosomal protein S21 YP_003207634.1 2372216 R 671143 CDS YP_003207635.1 392375802 13098737 complement(2372558..2373157) 1 NC_013260.1 peptidyl-prolyl cis-trans isomerase B (Rotamase B) (Cyclophilin ScCypB) (S-cyclophilin) 2373157 cypB 13098737 cypB Candidatus Methylomirabilis oxyfera peptidyl-prolyl cis-trans isomerase B (Rotamase B) (Cyclophilin ScCypB) (S-cyclophilin) YP_003207635.1 2372558 R 671143 CDS YP_003207636.1 392375803 13099113 complement(2373429..2374037) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2374037 13099113 DAMO_2762 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207636.1 2373429 R 671143 CDS YP_003207637.1 392375804 13099853 2373639..2373812 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2373812 13099853 DAMO_2763 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207637.1 2373639 D 671143 CDS YP_003207638.1 392375805 13098772 complement(2374089..2374940) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; protease htpX 2374940 htpX 13098772 htpX Candidatus Methylomirabilis oxyfera protease htpX YP_003207638.1 2374089 R 671143 CDS YP_003207639.1 392375806 13099114 complement(2375049..2375432) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2375432 13099114 DAMO_2765 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207639.1 2375049 R 671143 CDS YP_003207640.1 392375807 13099115 complement(2375393..2375578) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2375578 13099115 DAMO_2766 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207640.1 2375393 R 671143 CDS YP_003207641.1 392375808 13099116 complement(2375481..2376593) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9061015; Product type f : factor; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK 2376593 dnaJ 13099116 dnaJ Candidatus Methylomirabilis oxyfera chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK YP_003207641.1 2375481 R 671143 CDS YP_003207642.1 392375809 13099198 complement(2376733..2377185) 1 NC_013260.1 Heat shock protein Hsp20 2377185 13099198 DAMO_2768 Candidatus Methylomirabilis oxyfera Heat shock protein Hsp20 YP_003207642.1 2376733 R 671143 CDS YP_003207643.1 392375810 13098793 complement(2377300..2379219) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10613857, 9108282; Product type f : factor; chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) 2379219 dnaK 13098793 dnaK Candidatus Methylomirabilis oxyfera chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70) YP_003207643.1 2377300 R 671143 CDS YP_003207644.1 392375811 13100067 2379517..2379846 1 NC_013260.1 divalent-cation tolerance protein cutA 2379846 cutA 13100067 cutA Candidatus Methylomirabilis oxyfera divalent-cation tolerance protein cutA YP_003207644.1 2379517 D 671143 CDS YP_003207645.1 392375812 13099199 2380129..2382132 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Membrane-bound lytic murein transglycosylase D 2382132 13099199 DAMO_2771 Candidatus Methylomirabilis oxyfera Membrane-bound lytic murein transglycosylase D YP_003207645.1 2380129 D 671143 CDS YP_003207646.1 392375813 13099200 2382012..2382245 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2382245 13099200 DAMO_2772 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207646.1 2382012 D 671143 CDS YP_003207647.1 392375814 13098455 2382226..2382462 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2382462 13098455 DAMO_2773 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207647.1 2382226 D 671143 CDS YP_003207648.1 392375815 13099201 complement(2382566..2382754) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2382754 13099201 DAMO_2774 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207648.1 2382566 R 671143 CDS YP_003207649.1 392375816 13099202 2383127..2385511 1 NC_013260.1 Multicopper oxidase, type 2 2385511 13099202 DAMO_2775 Candidatus Methylomirabilis oxyfera Multicopper oxidase, type 2 YP_003207649.1 2383127 D 671143 CDS YP_003207650.1 392375817 13100088 2385579..2388095 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2388095 13100088 DAMO_2776 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207650.1 2385579 D 671143 CDS YP_003207651.1 392375818 13099203 2388083..2388271 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2388271 13099203 DAMO_2777 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207651.1 2388083 D 671143 CDS YP_003207652.1 392375819 13100170 2388316..2389380 1 NC_013260.1 glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) 2389380 strD 13100170 strD Candidatus Methylomirabilis oxyfera glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) YP_003207652.1 2388316 D 671143 CDS YP_003207653.1 392375820 13100063 2389404..2389865 1 NC_013260.1 Spore coat polysaccharide biosynthesis protein spsL 2389865 spsL 13100063 spsL Candidatus Methylomirabilis oxyfera Spore coat polysaccharide biosynthesis protein spsL YP_003207653.1 2389404 D 671143 CDS YP_003207654.1 392375821 13099204 2389868..2390890 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7559340, 8157605; Product type e : enzyme; dTDP-D-glucose 4,6-dehydratase 2390890 rfbB 13099204 rfbB Candidatus Methylomirabilis oxyfera dTDP-D-glucose 4,6-dehydratase YP_003207654.1 2389868 D 671143 CDS YP_003207655.1 392375822 13099207 2392430..2392642 1 NC_013260.1 hypothetical protein 2392642 13099207 DAMO_2783 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207655.1 2392430 D 671143 CDS YP_003207656.1 392375823 13099208 2392642..2393610 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; sugar-nucleotide epimerase/dehydratase 2393610 13099208 DAMO_2784 Candidatus Methylomirabilis oxyfera sugar-nucleotide epimerase/dehydratase YP_003207656.1 2392642 D 671143 CDS YP_003207657.1 392375824 13099209 complement(2393642..2394553) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; branched-chain-amino-acid aminotransferase (BCAT) 2394553 ilvE 13099209 ilvE Candidatus Methylomirabilis oxyfera branched-chain-amino-acid aminotransferase (BCAT) YP_003207657.1 2393642 R 671143 CDS YP_003207658.1 392375825 13099210 2394764..2395153 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2395153 13099210 DAMO_2786 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207658.1 2394764 D 671143 CDS YP_003207659.1 392375826 13098822 complement(2395174..2396376) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; thiamine biosynthesis protein thiI 2396376 thiI 13098822 thiI Candidatus Methylomirabilis oxyfera thiamine biosynthesis protein thiI YP_003207659.1 2395174 R 671143 CDS YP_003207660.1 392375827 13098821 2396851..2397189 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2397189 13098821 DAMO_2788 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207660.1 2396851 D 671143 CDS YP_003207661.1 392375828 13098723 2397374..2398762 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 2-nitropropane dioxygenase 2398762 13098723 DAMO_2789 Candidatus Methylomirabilis oxyfera 2-nitropropane dioxygenase YP_003207661.1 2397374 D 671143 CDS YP_003207662.1 392375829 13098529 2398794..2399501 1 NC_013260.1 glutamine amidotransferase, class I 2399501 13098529 DAMO_2790 Candidatus Methylomirabilis oxyfera glutamine amidotransferase, class I YP_003207662.1 2398794 D 671143 CDS YP_003207663.1 392375830 13098530 complement(2399498..2399800) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2399800 13098530 DAMO_2791 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207663.1 2399498 R 671143 CDS YP_003207664.1 392375831 13099211 complement(2399818..2400321) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2400321 13099211 DAMO_2792 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207664.1 2399818 R 671143 CDS YP_003207665.1 392375832 13099212 complement(2400396..2401787) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator 2401787 13099212 DAMO_2793 Candidatus Methylomirabilis oxyfera response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator YP_003207665.1 2400396 R 671143 CDS YP_003207666.1 392375833 13098467 complement(2401784..2403322) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 2403322 13098467 DAMO_2794 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003207666.1 2401784 R 671143 CDS YP_003207667.1 392375834 13099213 complement(2403415..2403573) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2403573 13099213 DAMO_2795 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207667.1 2403415 R 671143 CDS YP_003207668.1 392375835 13098843 2403461..2403952 1 NC_013260.1 iron-sulfur cluster-binding protein 2403952 13098843 DAMO_2796 Candidatus Methylomirabilis oxyfera iron-sulfur cluster-binding protein YP_003207668.1 2403461 D 671143 CDS YP_003207669.1 392375836 13099214 2403952..2405760 1 NC_013260.1 Tungsten-containing aldehyde ferredoxin oxidoreductase 2405760 aor 13099214 aor Candidatus Methylomirabilis oxyfera Tungsten-containing aldehyde ferredoxin oxidoreductase YP_003207669.1 2403952 D 671143 CDS YP_003207670.1 392375837 13099215 2405781..2406083 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; MoaD 2406083 13099215 DAMO_2798 Candidatus Methylomirabilis oxyfera MoaD YP_003207670.1 2405781 D 671143 CDS YP_003207671.1 392375838 13099216 2406103..2407065 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2407065 13099216 DAMO_2799 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207671.1 2406103 D 671143 CDS YP_003207672.1 392375839 13099217 2407109..2408374 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2408374 13099217 DAMO_2800 Candidatus Methylomirabilis oxyfera FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003207672.1 2407109 D 671143 CDS YP_003207673.1 392375840 13099218 2408371..2408646 1 NC_013260.1 sulfur carrier protein ThiS 2408646 13099218 DAMO_2801 Candidatus Methylomirabilis oxyfera sulfur carrier protein ThiS YP_003207673.1 2408371 D 671143 CDS YP_003207674.1 392375841 13099219 complement(2408608..2409045) 1 NC_013260.1 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] (Diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Ap4Aase) (Nucleoside diphosphate-linked moiety X motif 2) (Nudix motif 2) 2409045 Nudt 13099219 Nudt Candidatus Methylomirabilis oxyfera Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] (Diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Ap4Aase) (Nucleoside diphosphate-linked moiety X motif 2) (Nudix motif 2) YP_003207674.1 2408608 R 671143 CDS YP_003207675.1 392375842 13099220 2409156..2409473 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2409473 13099220 DAMO_2803 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207675.1 2409156 D 671143 CDS YP_003207676.1 392375843 13099221 complement(2409547..2410524) 1 NC_013260.1 ribokinase 2410524 rbsK 13099221 rbsK Candidatus Methylomirabilis oxyfera ribokinase YP_003207676.1 2409547 R 671143 CDS YP_003207677.1 392375844 13099222 complement(2410506..2411492) 1 NC_013260.1 inosine-uridine preferring nucleoside hydrolase 2411492 13099222 DAMO_2805 Candidatus Methylomirabilis oxyfera inosine-uridine preferring nucleoside hydrolase YP_003207677.1 2410506 R 671143 CDS YP_003207678.1 392375845 13099903 2411564..2411641 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2411641 13099903 DAMO_2806 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207678.1 2411564 D 671143 CDS YP_003207679.1 392375846 13099223 2411699..2412265 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2412265 13099223 DAMO_2807 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207679.1 2411699 D 671143 CDS YP_003207680.1 392375847 13099224 2412262..2413134 1 NC_013260.1 ErfK/YbiS/YcfS/YnhG 2413134 13099224 DAMO_2808 Candidatus Methylomirabilis oxyfera ErfK/YbiS/YcfS/YnhG YP_003207680.1 2412262 D 671143 CDS YP_003207681.1 392375848 13099225 2413049..2413249 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2413249 13099225 DAMO_2809 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207681.1 2413049 D 671143 CDS YP_003207682.1 392375849 13099226 2413246..2414784 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2414784 13099226 DAMO_2810 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207682.1 2413246 D 671143 CDS YP_003207683.1 392375850 13098606 2414775..2414969 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2414969 13098606 DAMO_2811 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207683.1 2414775 D 671143 CDS YP_003207684.1 392375851 13099227 2415000..2416307 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12788763, 15995199, 8526514, 9729766; Product type e : enzyme; citrate synthase 2416307 gltA 13099227 gltA Candidatus Methylomirabilis oxyfera citrate synthase YP_003207684.1 2415000 D 671143 CDS YP_003207685.1 392375852 13098715 2416321..2417259 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2417259 13098715 DAMO_2813 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207685.1 2416321 D 671143 CDS YP_003207686.1 392375853 13099228 2417491..2418042 1 NC_013260.1 hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) 2418042 hprT 13099228 hprT Candidatus Methylomirabilis oxyfera hypoxanthine-guanine phosphoribosyltransferase (HGPRTase) (HGPRT) YP_003207686.1 2417491 D 671143 CDS YP_003207687.1 392375854 13099230 2418655..2420622 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter ATP-binding protein with duplicated ATPase domains 2420622 13099230 DAMO_2815 Candidatus Methylomirabilis oxyfera ABC transporter ATP-binding protein with duplicated ATPase domains YP_003207687.1 2418655 D 671143 CDS YP_003207688.1 392375855 13099231 2420700..2421350 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2421350 13099231 DAMO_2816 Candidatus Methylomirabilis oxyfera membrane protein YP_003207688.1 2420700 D 671143 CDS YP_003207689.1 392375856 13099232 complement(2421377..2422933) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 2422933 13099232 DAMO_2817 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003207689.1 2421377 R 671143 CDS YP_003207690.1 392375857 13099233 complement(2422878..2423618) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type r : regulator; response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) 2423618 phoB 13099233 phoB Candidatus Methylomirabilis oxyfera response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) YP_003207690.1 2422878 R 671143 CDS YP_003207691.1 392375858 13099234 complement(2423843..2424562) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2424562 13099234 DAMO_2819 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207691.1 2423843 R 671143 CDS YP_003207692.1 392375859 13098401 2424718..2424897 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2424897 13098401 DAMO_2820 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207692.1 2424718 D 671143 CDS YP_003207693.1 392375860 13099235 complement(2425000..2425311) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2425311 13099235 DAMO_2821 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207693.1 2425000 R 671143 CDS YP_003207694.1 392375861 13098448 complement(2425442..2426830) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2426830 13098448 DAMO_2822 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207694.1 2425442 R 671143 CDS YP_003207695.1 392375862 13099764 2427144..2427917 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2427917 13099764 DAMO_2823 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207695.1 2427144 D 671143 CDS YP_003207696.1 392375863 13099236 2427924..2429114 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2429114 13099236 DAMO_2824 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207696.1 2427924 D 671143 CDS YP_003207697.1 392375864 13099237 complement(2429077..2429787) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2429787 13099237 DAMO_2825 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207697.1 2429077 R 671143 CDS YP_003207698.1 392375865 13099238 2429987..2430346 1 NC_013260.1 Regulatory protein, ArsR 2430346 13099238 DAMO_2826 Candidatus Methylomirabilis oxyfera Regulatory protein, ArsR YP_003207698.1 2429987 D 671143 CDS YP_003207699.1 392375866 13098654 2430388..2430906 1 NC_013260.1 hycG protein 2430906 hycG 13098654 hycG Candidatus Methylomirabilis oxyfera hycG protein YP_003207699.1 2430388 D 671143 CDS YP_003207700.1 392375867 13099239 2431089..2433122 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2433122 13099239 DAMO_2828 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207700.1 2431089 D 671143 CDS YP_003207701.1 392375868 13099240 2433129..2434073 1 NC_013260.1 membrane-bound [NiFe]-hydrogenase-3, subunit D 2434073 hycD 13099240 hycD Candidatus Methylomirabilis oxyfera membrane-bound [NiFe]-hydrogenase-3, subunit D YP_003207701.1 2433129 D 671143 CDS YP_003207702.1 392375869 13099241 2434083..2434742 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2434742 13099241 DAMO_2830 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207702.1 2434083 D 671143 CDS YP_003207703.1 392375870 13099242 2434742..2436199 1 NC_013260.1 hydrogenase-4 component F 2436199 hyfF 13099242 hyfF Candidatus Methylomirabilis oxyfera hydrogenase-4 component F YP_003207703.1 2434742 D 671143 CDS YP_003207704.1 392375871 13099243 2436192..2437775 1 NC_013260.1 hydrogenase, large subunit-like protein (HycE-like) 2437775 13099243 DAMO_2832 Candidatus Methylomirabilis oxyfera hydrogenase, large subunit-like protein (HycE-like) YP_003207704.1 2436192 D 671143 CDS YP_003207705.1 392375872 13099244 2438401..2439222 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10972799, 11251836; Product type e : enzyme; Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) 2439222 pyrF 13099244 pyrF Candidatus Methylomirabilis oxyfera Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) YP_003207705.1 2438401 D 671143 CDS YP_003207706.1 392375873 13099245 complement(2439314..2439505) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2439505 13099245 DAMO_2834 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207706.1 2439314 R 671143 CDS YP_003207707.1 392375874 13099246 complement(2439731..2442271) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2442271 13099246 DAMO_2835 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207707.1 2439731 R 671143 CDS YP_003207708.1 392375875 13098460 complement(2442275..2444041) 1 NC_013260.1 adenine specific DNA methylase Mod 2444041 Mod 13098460 Mod Candidatus Methylomirabilis oxyfera adenine specific DNA methylase Mod YP_003207708.1 2442275 R 671143 CDS YP_003207709.1 392375876 13099247 complement(2444053..2446962) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2446962 13099247 DAMO_2837 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207709.1 2444053 R 671143 CDS YP_003207710.1 392375877 13098459 2447578..2449059 1 NC_013260.1 periplasmic sensor signal transduction histidine kinase 2449059 13098459 DAMO_2838 Candidatus Methylomirabilis oxyfera periplasmic sensor signal transduction histidine kinase YP_003207710.1 2447578 D 671143 CDS YP_003207711.1 392375878 13099248 2449059..2450522 1 NC_013260.1 acetoacetate metabolism regulatory protein atoC (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme) 2450522 atoC 13099248 atoC Candidatus Methylomirabilis oxyfera acetoacetate metabolism regulatory protein atoC (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme) YP_003207711.1 2449059 D 671143 CDS YP_003207712.1 392375879 13098461 2450523..2450618 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2450618 13098461 DAMO_2840 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207712.1 2450523 D 671143 CDS YP_003207713.1 392375880 13099249 2450750..2451301 1 NC_013260.1 ECF subfamily RNA polymerase sigma-24 subunit 2451301 13099249 DAMO_2841 Candidatus Methylomirabilis oxyfera ECF subfamily RNA polymerase sigma-24 subunit YP_003207713.1 2450750 D 671143 CDS YP_003207714.1 392375881 13098702 2451320..2452027 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2452027 13098702 DAMO_2842 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207714.1 2451320 D 671143 CDS YP_003207715.1 392375882 13099250 2452024..2452641 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2452641 13099250 DAMO_2843 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207715.1 2452024 D 671143 CDS YP_003207716.1 392375883 13099251 2452720..2452902 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2452902 13099251 DAMO_2844 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207716.1 2452720 D 671143 CDS YP_003207717.1 392375884 13098548 2453277..2454569 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; tRNA cytidylyltransferase 2454569 13098548 DAMO_2845 Candidatus Methylomirabilis oxyfera tRNA cytidylyltransferase YP_003207717.1 2453277 D 671143 CDS YP_003207718.1 392375885 13099252 2454671..2455315 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2455315 13099252 DAMO_2846 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207718.1 2454671 D 671143 CDS YP_003207719.1 392375886 13099253 2455339..2456325 1 NC_013260.1 tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) 2456325 trpS 13099253 trpS Candidatus Methylomirabilis oxyfera tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) YP_003207719.1 2455339 D 671143 CDS YP_003207720.1 392375887 13100008 2456381..2457844 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11059489; Product type e : enzyme; inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) 2457844 guaB 13100008 guaB Candidatus Methylomirabilis oxyfera inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) YP_003207720.1 2456381 D 671143 CDS YP_003207721.1 392375888 13099254 complement(2457860..2458093) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2458093 13099254 DAMO_2849 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207721.1 2457860 R 671143 CDS YP_003207722.1 392375889 13099255 2458001..2459533 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; GMP synthase 2459533 guaA 13099255 guaA Candidatus Methylomirabilis oxyfera GMP synthase YP_003207722.1 2458001 D 671143 CDS YP_003207723.1 392375890 13099256 complement(2459488..2459574) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2459574 13099256 DAMO_2851 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207723.1 2459488 R 671143 CDS YP_003207724.1 392375891 13099257 2459719..2459913 1 NC_013260.1 hypothetical protein 2459913 13099257 DAMO_2852 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207724.1 2459719 D 671143 CDS YP_003207725.1 392375892 13099258 complement(2459923..2459997) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2459997 13099258 DAMO_2853 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207725.1 2459923 R 671143 CDS YP_003207726.1 392375893 13099259 2460069..2460386 1 NC_013260.1 DNA polymerase beta domain-containing protein region 2460386 13099259 DAMO_2854 Candidatus Methylomirabilis oxyfera DNA polymerase beta domain-containing protein region YP_003207726.1 2460069 D 671143 CDS YP_003207727.1 392375894 13099260 2460367..2460729 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2460729 13099260 DAMO_2855 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207727.1 2460367 D 671143 CDS YP_003207728.1 392375895 13098866 2460804..2464244 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2676978; Product type e : enzyme; DNA polymerase III subunit alpha 2464244 dnaE 13098866 dnaE Candidatus Methylomirabilis oxyfera DNA polymerase III subunit alpha YP_003207728.1 2460804 D 671143 CDS YP_003207729.1 392375896 13098420 2464343..2465932 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; WD40 domain protein beta Propeller 2465932 13098420 DAMO_2857 Candidatus Methylomirabilis oxyfera WD40 domain protein beta Propeller YP_003207729.1 2464343 D 671143 CDS YP_003207730.1 392375897 13099261 complement(2466113..2467456) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2467456 13099261 DAMO_2858 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207730.1 2466113 R 671143 CDS YP_003207731.1 392375898 13098419 complement(2467453..2468925) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8604133; Product type pe : putative enzyme; peptidase TldD 2468925 tldD 13098419 tldD Candidatus Methylomirabilis oxyfera peptidase TldD YP_003207731.1 2467453 R 671143 CDS YP_003207732.1 392375899 13099262 2469033..2469749 1 NC_013260.1 hypothetical protein 2469749 13099262 DAMO_2860 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207732.1 2469033 D 671143 CDS YP_003207733.1 392375900 13099263 2469719..2470132 1 NC_013260.1 CTP pyrophosphohydrolase 2470132 nudG 13099263 nudG Candidatus Methylomirabilis oxyfera CTP pyrophosphohydrolase YP_003207733.1 2469719 D 671143 CDS YP_003207734.1 392375901 13099264 complement(2470129..2470659) 1 NC_013260.1 peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) 2470659 def 13099264 def Candidatus Methylomirabilis oxyfera peptide deformylase 2 (PDF 2) (Polypeptide deformylase 2) YP_003207734.1 2470129 R 671143 CDS YP_003207735.1 392375902 13099265 complement(2470676..2471218) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; ATP:cob(I)alamin adenosyltransferase, monofunctional PduO type 2471218 13099265 DAMO_2863 Candidatus Methylomirabilis oxyfera ATP:cob(I)alamin adenosyltransferase, monofunctional PduO type YP_003207735.1 2470676 R 671143 CDS YP_003207736.1 392375903 13099266 complement(2471533..2472018) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2472018 13099266 DAMO_2864 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207736.1 2471533 R 671143 CDS YP_003207737.1 392375904 13100086 complement(2472223..2473287) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2473287 13100086 DAMO_2865 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207737.1 2472223 R 671143 CDS YP_003207738.1 392375905 13099267 2473277..2473474 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2473474 13099267 DAMO_2866 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207738.1 2473277 D 671143 CDS YP_003207739.1 392375906 13099268 complement(2473669..2473980) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2473980 13099268 DAMO_2867 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207739.1 2473669 R 671143 CDS YP_003207740.1 392375907 13098850 complement(2474291..2475127) 1 NC_013260.1 DNA adenine methylase 2475127 13098850 DAMO_2868 Candidatus Methylomirabilis oxyfera DNA adenine methylase YP_003207740.1 2474291 R 671143 CDS YP_003207741.1 392375908 13099269 complement(2475120..2477477) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2477477 13099269 DAMO_2869 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207741.1 2475120 R 671143 CDS YP_003207742.1 392375909 13098605 complement(2477502..2477732) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2477732 13098605 DAMO_2870 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207742.1 2477502 R 671143 CDS YP_003207743.1 392375910 13100080 2477508..2477585 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2477585 13100080 DAMO_2871 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207743.1 2477508 D 671143 CDS YP_003207744.1 392375911 13099270 complement(2477939..2478703) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2478703 13099270 DAMO_2872 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207744.1 2477939 R 671143 CDS YP_003207745.1 392375912 13099271 2478560..2478997 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2478997 13099271 DAMO_2873 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207745.1 2478560 D 671143 CDS YP_003207746.1 392375913 13099272 complement(2479165..2479329) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2479329 13099272 DAMO_2874 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207746.1 2479165 R 671143 CDS YP_003207747.1 392375914 13099273 complement(2479596..2480996) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2480996 13099273 DAMO_2875 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207747.1 2479596 R 671143 CDS YP_003207748.1 392375915 13099274 complement(2481100..2482500) 1 NC_013260.1 Sensor protein 2482500 13099274 DAMO_2876 Candidatus Methylomirabilis oxyfera Sensor protein YP_003207748.1 2481100 R 671143 CDS YP_003207749.1 392375916 13099275 complement(2482500..2483177) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11004187, 11283292, 11399769; Product type pr : putative regulator; two-component transcriptional regulator 2483177 13099275 DAMO_2877 Candidatus Methylomirabilis oxyfera two-component transcriptional regulator YP_003207749.1 2482500 R 671143 CDS YP_003207750.1 392375917 13099276 complement(2483269..2483652) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2483652 13099276 DAMO_2878 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207750.1 2483269 R 671143 CDS YP_003207751.1 392375918 13099277 complement(2483645..2483944) 1 NC_013260.1 Plasmid maintenance system killer 2483944 13099277 DAMO_2879 Candidatus Methylomirabilis oxyfera Plasmid maintenance system killer YP_003207751.1 2483645 R 671143 CDS YP_003207752.1 392375919 13099278 complement(2484077..2484208) 1 NC_013260.1 hypothetical protein 2484208 13099278 DAMO_2880 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207752.1 2484077 R 671143 CDS YP_003207753.1 392375920 13099360 complement(2484247..2484864) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2484864 13099360 DAMO_2881 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207753.1 2484247 R 671143 CDS YP_003207754.1 392375921 13099361 complement(2484980..2485885) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2485885 13099361 DAMO_2882 Candidatus Methylomirabilis oxyfera membrane protein YP_003207754.1 2484980 R 671143 CDS YP_003207755.1 392375922 13099362 complement(2485849..2487969) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) 2487969 13099362 DAMO_2883 Candidatus Methylomirabilis oxyfera 4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) YP_003207755.1 2485849 R 671143 CDS YP_003207756.1 392375923 13099363 complement(2488076..2490295) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12196524; Product type e : enzyme; 1,4-alpha-glucan-branching protein 2490295 glgB 13099363 glgB Candidatus Methylomirabilis oxyfera 1,4-alpha-glucan-branching protein YP_003207756.1 2488076 R 671143 CDS YP_003207757.1 392375924 13099364 complement(2490296..2490667) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2490667 13099364 DAMO_2885 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207757.1 2490296 R 671143 CDS YP_003207758.1 392375925 13099365 complement(2490546..2490872) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2490872 13099365 DAMO_2886 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207758.1 2490546 R 671143 CDS YP_003207759.1 392375926 13099366 2491241..2491459 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 2491459 13099366 DAMO_2887 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207759.1 2491241 D 671143 CDS YP_003207760.1 392375927 13099367 complement(2491438..2492043) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2492043 13099367 DAMO_2888 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207760.1 2491438 R 671143 CDS YP_003207761.1 392375928 13099368 complement(2492040..2492105) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2492105 13099368 DAMO_2889 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207761.1 2492040 R 671143 CDS YP_003207762.1 392375929 13099369 complement(2492496..2493881) 1 NC_013260.1 penicillin-binding protein 1A 2493881 13099369 DAMO_2890 Candidatus Methylomirabilis oxyfera penicillin-binding protein 1A YP_003207762.1 2492496 R 671143 CDS YP_003207763.1 392375930 13099370 complement(2493956..2494714) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2494714 13099370 DAMO_2891 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207763.1 2493956 R 671143 CDS YP_003207764.1 392375931 13099371 complement(2494743..2495480) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2495480 13099371 DAMO_2892 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207764.1 2494743 R 671143 CDS YP_003207765.1 392375932 13100245 complement(2495667..2495939) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2495939 13100245 DAMO_2893 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207765.1 2495667 R 671143 CDS YP_003207766.1 392375933 13099372 2495940..2496188 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2496188 13099372 DAMO_2894 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207766.1 2495940 D 671143 CDS YP_003207767.1 392375934 13099373 complement(2495946..2496224) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2496224 13099373 DAMO_2895 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207767.1 2495946 R 671143 CDS YP_003207768.1 392375935 13099374 2496347..2499322 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2499322 13099374 DAMO_2896 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207768.1 2496347 D 671143 CDS YP_003207769.1 392375936 13099375 2499319..2499915 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; nucleotidase yqfW 2499915 13099375 DAMO_2897 Candidatus Methylomirabilis oxyfera nucleotidase yqfW YP_003207769.1 2499319 D 671143 CDS YP_003207770.1 392375937 13099376 2500006..2500860 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2500860 13099376 DAMO_2898 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207770.1 2500006 D 671143 CDS YP_003207771.1 392375938 13099377 2500862..2501821 1 NC_013260.1 Cation diffusion facilitator family transporter 2501821 13099377 DAMO_2899 Candidatus Methylomirabilis oxyfera Cation diffusion facilitator family transporter YP_003207771.1 2500862 D 671143 CDS YP_003207772.1 392375939 13099378 complement(2501795..2501962) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2501962 13099378 DAMO_2900 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207772.1 2501795 R 671143 CDS YP_003207773.1 392375940 13099379 2501954..2502613 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2502613 13099379 DAMO_2901 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207773.1 2501954 D 671143 CDS YP_003207774.1 392375941 13099380 complement(2502071..2502583) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2502583 13099380 DAMO_2902 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207774.1 2502071 R 671143 CDS YP_003207775.1 392375942 13099381 complement(2502583..2503128) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2503128 13099381 DAMO_2903 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207775.1 2502583 R 671143 CDS YP_003207776.1 392375943 13099382 complement(2503234..2504685) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2504685 13099382 DAMO_2904 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207776.1 2503234 R 671143 CDS YP_003207777.1 392375944 13099383 complement(2504789..2505895) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; thiamine biosynthesis lipoprotein TRANSMEMBRANE 2505895 13099383 DAMO_2905 Candidatus Methylomirabilis oxyfera thiamine biosynthesis lipoprotein TRANSMEMBRANE YP_003207777.1 2504789 R 671143 CDS YP_003207778.1 392375945 13099384 complement(2505913..2507073) 1 NC_013260.1 hypothetical protein 2507073 13099384 DAMO_2906 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207778.1 2505913 R 671143 CDS YP_003207779.1 392375946 13099385 complement(2507401..2508540) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter ATP binding protein 2508540 13099385 DAMO_2907 Candidatus Methylomirabilis oxyfera ABC transporter ATP binding protein YP_003207779.1 2507401 R 671143 CDS YP_003207780.1 392375947 13099386 complement(2508587..2510158) 1 NC_013260.1 iron(III) ABC transporter permease protein 2510158 13099386 DAMO_2908 Candidatus Methylomirabilis oxyfera iron(III) ABC transporter permease protein YP_003207780.1 2508587 R 671143 CDS YP_003207781.1 392375948 13099387 complement(2510267..2511271) 1 NC_013260.1 iron(III) ABC transporter iron (III)-binding protein 2511271 13099387 DAMO_2909 Candidatus Methylomirabilis oxyfera iron(III) ABC transporter iron (III)-binding protein YP_003207781.1 2510267 R 671143 CDS YP_003207782.1 392375949 13099388 complement(2511354..2512022) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2512022 13099388 DAMO_2910 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207782.1 2511354 R 671143 CDS YP_003207783.1 392375950 13099389 2512073..2512354 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2512354 13099389 DAMO_2911 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207783.1 2512073 D 671143 CDS YP_003207784.1 392375951 13099390 2512209..2512673 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2512673 13099390 DAMO_2912 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207784.1 2512209 D 671143 CDS YP_003207785.1 392375952 13099391 complement(2512795..2513508) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2513508 13099391 DAMO_2913 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207785.1 2512795 R 671143 CDS YP_003207786.1 392375953 13099392 complement(2513516..2513713) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2513713 13099392 DAMO_2914 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207786.1 2513516 R 671143 CDS YP_003207787.1 392375954 13099393 complement(2513682..2514494) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; esterase/lipase 2514494 13099393 DAMO_2915 Candidatus Methylomirabilis oxyfera esterase/lipase YP_003207787.1 2513682 R 671143 CDS YP_003207788.1 392375955 13099394 complement(2514403..2514612) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2514612 13099394 DAMO_2916 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207788.1 2514403 R 671143 CDS YP_003207789.1 392375956 13099395 2514612..2517923 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2517923 13099395 DAMO_2917 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207789.1 2514612 D 671143 CDS YP_003207790.1 392375957 13099396 2517998..2518801 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2518801 13099396 DAMO_2918 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207790.1 2517998 D 671143 CDS YP_003207791.1 392375958 13099397 2518798..2519067 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2519067 13099397 DAMO_2919 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207791.1 2518798 D 671143 CDS YP_003207792.1 392375959 13099398 2519064..2519639 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2519639 13099398 DAMO_2920 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207792.1 2519064 D 671143 CDS YP_003207793.1 392375960 13099399 complement(2519629..2519916) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15159579; Product type e : enzyme; acylphosphatase 2519916 yccX 13099399 yccX Candidatus Methylomirabilis oxyfera acylphosphatase YP_003207793.1 2519629 R 671143 CDS YP_003207794.1 392375961 13099400 complement(2519924..2520985) 1 NC_013260.1 Farnesyl-diphosphate farnesyltransferase 2520985 13099400 DAMO_2922 Candidatus Methylomirabilis oxyfera Farnesyl-diphosphate farnesyltransferase YP_003207794.1 2519924 R 671143 CDS YP_003207795.1 392375962 13099401 2520944..2521342 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2521342 13099401 DAMO_2923 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207795.1 2520944 D 671143 CDS YP_003207796.1 392375963 13099402 complement(2520995..2521303) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2521303 13099402 DAMO_2924 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207796.1 2520995 R 671143 CDS YP_003207797.1 392375964 13099403 complement(2521413..2521754) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2521754 13099403 DAMO_2925 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207797.1 2521413 R 671143 CDS YP_003207798.1 392375965 13099404 complement(2521759..2522139) 1 NC_013260.1 protein crcB 2522139 crcB 13099404 crcB Candidatus Methylomirabilis oxyfera protein crcB YP_003207798.1 2521759 R 671143 CDS YP_003207799.1 392375966 13099405 complement(2522243..2522776) 1 NC_013260.1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase) (DHK-MTPene dioxygenase) 2522776 mtnD 13099405 mtnD Candidatus Methylomirabilis oxyfera 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (5-methylthio-3-oxo-1-penten-1,2-diol dioxygenase) (DHK-MTPene dioxygenase) YP_003207799.1 2522243 R 671143 CDS YP_003207800.1 392375967 13099406 complement(2522779..2523495) 1 NC_013260.1 methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) 2523495 mtnB 13099406 mtnB Candidatus Methylomirabilis oxyfera methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase) YP_003207800.1 2522779 R 671143 CDS YP_003207801.1 392375968 13099407 complement(2523495..2524163) 1 NC_013260.1 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2524163 13099407 DAMO_2929 Candidatus Methylomirabilis oxyfera 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_003207801.1 2523495 R 671143 CDS YP_003207802.1 392375969 13098895 complement(2524160..2525389) 1 NC_013260.1 2,3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) 2525389 mtnW 13098895 mtnW Candidatus Methylomirabilis oxyfera 2,3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) YP_003207802.1 2524160 R 671143 CDS YP_003207803.1 392375970 13099408 complement(2525606..2525722) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2525722 13099408 DAMO_2931 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207803.1 2525606 R 671143 CDS YP_003207804.1 392375971 13099409 complement(2525823..2526101) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2526101 13099409 DAMO_2932 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207804.1 2525823 R 671143 CDS YP_003207805.1 392375972 13099410 complement(2526073..2526363) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2526363 13099410 DAMO_2933 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207805.1 2526073 R 671143 CDS YP_003207806.1 392375973 13099411 complement(2526539..2527507) 1 NC_013260.1 Aldo/keto reductase 2527507 13099411 DAMO_2934 Candidatus Methylomirabilis oxyfera Aldo/keto reductase YP_003207806.1 2526539 R 671143 CDS YP_003207807.1 392375974 13100057 complement(2527509..2528027) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Adenylate cyclase 2528027 13100057 DAMO_2935 Candidatus Methylomirabilis oxyfera Adenylate cyclase YP_003207807.1 2527509 R 671143 CDS YP_003207808.1 392375975 13098564 complement(2528031..2528213) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2528213 13098564 DAMO_2936 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207808.1 2528031 R 671143 CDS YP_003207809.1 392375976 13098563 complement(2528314..2530608) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 2530608 13098563 DAMO_2937 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003207809.1 2528314 R 671143 CDS YP_003207810.1 392375977 13099412 complement(2530757..2532631) 1 NC_013260.1 phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) 2532631 pckG 13099412 pckG Candidatus Methylomirabilis oxyfera phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) YP_003207810.1 2530757 R 671143 CDS YP_003207811.1 392375978 13099413 complement(2532978..2533577) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type f : factor; Recombination protein recR 2533577 recR 13099413 recR Candidatus Methylomirabilis oxyfera Recombination protein recR YP_003207811.1 2532978 R 671143 CDS YP_003207812.1 392375979 13099414 complement(2533585..2533899) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2533899 13099414 DAMO_2940 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207812.1 2533585 R 671143 CDS YP_003207813.1 392375980 13099415 2533883..2533987 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2533987 13099415 DAMO_2941 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207813.1 2533883 D 671143 CDS YP_003207814.1 392375981 13099416 complement(2533919..2535724) 1 NC_013260.1 DNA polymerase III subunits gamma and tau 2535724 13099416 DAMO_2942 Candidatus Methylomirabilis oxyfera DNA polymerase III subunits gamma and tau YP_003207814.1 2533919 R 671143 CDS YP_003207815.1 392375982 13099418 complement(2536105..2537055) 1 NC_013260.1 ADP-L-glycero-D-manno-heptose-6-epimerase 2537055 13099418 DAMO_2943 Candidatus Methylomirabilis oxyfera ADP-L-glycero-D-manno-heptose-6-epimerase YP_003207815.1 2536105 R 671143 CDS YP_003207816.1 392375983 13099420 complement(2537846..2539132) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3029694; Product type e : enzyme; Seryl-tRNA synthetase 2539132 serS 13099420 serS Candidatus Methylomirabilis oxyfera Seryl-tRNA synthetase YP_003207816.1 2537846 R 671143 CDS YP_003207817.1 392375984 13099421 complement(2539315..2541840) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9278055; Product type e : enzyme; DNA gyrase subunit A 2541840 gyrA 13099421 gyrA Candidatus Methylomirabilis oxyfera DNA gyrase subunit A YP_003207817.1 2539315 R 671143 CDS YP_003207818.1 392375985 13099422 complement(2541990..2544470) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10223925, 1646964, 8982450; Product type e : enzyme; DNA gyrase subunit B 2544470 gyrB 13099422 gyrB Candidatus Methylomirabilis oxyfera DNA gyrase subunit B YP_003207818.1 2541990 R 671143 CDS YP_003207819.1 392375986 13099755 complement(2544553..2545659) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1349852, 14592985, 2841344, 3527871, 6234204; Product type e : enzyme; DNA polymerase III subunit beta 2545659 dnaN 13099755 dnaN Candidatus Methylomirabilis oxyfera DNA polymerase III subunit beta YP_003207819.1 2544553 R 671143 CDS YP_003207820.1 392375987 13099423 complement(2545684..2545872) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2545872 13099423 DAMO_2948 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207820.1 2545684 R 671143 CDS YP_003207821.1 392375988 13099851 2546022..2546201 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2546201 13099851 DAMO_2949 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207821.1 2546022 D 671143 CDS YP_003207822.1 392375989 13099850 2546330..2546698 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2546698 13099850 DAMO_2950 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207822.1 2546330 D 671143 CDS YP_003207823.1 392375990 13099849 2546619..2546891 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2546891 13099849 DAMO_2951 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207823.1 2546619 D 671143 CDS YP_003207824.1 392375991 13099847 2546936..2548609 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Inner membrane protein oxaA 2548609 13099847 DAMO_2952 Candidatus Methylomirabilis oxyfera Inner membrane protein oxaA YP_003207824.1 2546936 D 671143 CDS YP_003207825.1 392375992 13098813 2548590..2549339 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Methyltransferase gidB (Glucose-inhibited division protein B) 2549339 13098813 DAMO_2953 Candidatus Methylomirabilis oxyfera Methyltransferase gidB (Glucose-inhibited division protein B) YP_003207825.1 2548590 D 671143 CDS YP_003207826.1 392375993 13098421 2549738..2550496 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9054507; Product type f : factor; chromosome partitioning protein 2550496 parA 13098421 parA Candidatus Methylomirabilis oxyfera chromosome partitioning protein YP_003207826.1 2549738 D 671143 CDS YP_003207827.1 392375994 13098422 2550483..2551325 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9054507; Product type f : factor; chromosome partitioning protein 2551325 parB 13098422 parB Candidatus Methylomirabilis oxyfera chromosome partitioning protein YP_003207827.1 2550483 D 671143 CDS YP_003207828.1 392375995 13100171 2551364..2552062 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2552062 13100171 DAMO_2956 Candidatus Methylomirabilis oxyfera membrane protein YP_003207828.1 2551364 D 671143 CDS YP_003207829.1 392375996 13099424 2552155..2553330 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8464885; Product type e : enzyme; cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) 2553330 nifS 13099424 nifS Candidatus Methylomirabilis oxyfera cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) YP_003207829.1 2552155 D 671143 CDS YP_003207830.1 392375997 13099425 2553379..2554452 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3298234, 4703553; Product type e : enzyme; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 2554452 trmU 13099425 trmU Candidatus Methylomirabilis oxyfera tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_003207830.1 2553379 D 671143 CDS YP_003207831.1 392375998 13099426 2554574..2554984 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2554984 13099426 DAMO_2959 Candidatus Methylomirabilis oxyfera membrane protein YP_003207831.1 2554574 D 671143 CDS YP_003207832.1 392375999 13099427 2554981..2555586 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Sodium-transporting two-sector ATPase 2555586 13099427 DAMO_2960 Candidatus Methylomirabilis oxyfera Sodium-transporting two-sector ATPase YP_003207832.1 2554981 D 671143 CDS YP_003207833.1 392376000 13099428 2555583..2556134 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; ATP synthase delta chain 2556134 13099428 DAMO_2961 Candidatus Methylomirabilis oxyfera ATP synthase delta chain YP_003207833.1 2555583 D 671143 CDS YP_003207834.1 392376001 13099429 2556153..2557679 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 2903146; Product type e : enzyme; ATP synthase subunit alpha, membrane-bound, F1 sector 2557679 atpA 13099429 atpA Candidatus Methylomirabilis oxyfera ATP synthase subunit alpha, membrane-bound, F1 sector YP_003207834.1 2556153 D 671143 CDS YP_003207835.1 392376002 13098632 2557724..2558596 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10570135; Product type e : enzyme; ATP synthase subunit gamma, membrane-bound, F1 sector 2558596 atpG 13098632 atpG Candidatus Methylomirabilis oxyfera ATP synthase subunit gamma, membrane-bound, F1 sector YP_003207835.1 2557724 D 671143 CDS YP_003207836.1 392376003 13098633 2558651..2560072 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2889623; Product type e : enzyme; ATP synthase subunit beta, membrane-bound, F1 sector 2560072 atpD 13098633 atpD Candidatus Methylomirabilis oxyfera ATP synthase subunit beta, membrane-bound, F1 sector YP_003207836.1 2558651 D 671143 CDS YP_003207837.1 392376004 13099430 2560155..2560559 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9331422; Product type e : enzyme; ATP synthase subunit epsilon, membrane-bound, F1 sector 2560559 atpC 13099430 atpC Candidatus Methylomirabilis oxyfera ATP synthase subunit epsilon, membrane-bound, F1 sector YP_003207837.1 2560155 D 671143 CDS YP_003207838.1 392376005 13098600 2560567..2561583 1 NC_013260.1 phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) 2561583 aroF 13098600 aroF Candidatus Methylomirabilis oxyfera phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) YP_003207838.1 2560567 D 671143 CDS YP_003207839.1 392376006 13098857 2561697..2561804 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2561804 13098857 DAMO_2967 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207839.1 2561697 D 671143 CDS YP_003207840.1 392376007 13099431 complement(2561904..2562287) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 12777779, 9484901; Product type e : enzyme; L-PSP (mRNA) endoribonuclease 2562287 tdcF 13099431 tdcF Candidatus Methylomirabilis oxyfera L-PSP (mRNA) endoribonuclease YP_003207840.1 2561904 R 671143 CDS YP_003207841.1 392376008 13099432 complement(2562277..2562456) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2562456 13099432 DAMO_2969 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207841.1 2562277 R 671143 CDS YP_003207842.1 392376009 13099433 complement(2562471..2564276) 1 NC_013260.1 UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C) 2564276 uvrC 13099433 uvrC Candidatus Methylomirabilis oxyfera UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C) YP_003207842.1 2562471 R 671143 CDS YP_003207843.1 392376010 13100009 2564456..2564641 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2564641 13100009 DAMO_2971 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207843.1 2564456 D 671143 CDS YP_003207844.1 392376011 13100012 complement(2564660..2566489) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type ph : phenotype; GTP-binding protein typA/bipA (Tyrosine phosphorylated protein A) 2566489 typA 13100012 typA Candidatus Methylomirabilis oxyfera GTP-binding protein typA/bipA (Tyrosine phosphorylated protein A) YP_003207844.1 2564660 R 671143 CDS YP_003207845.1 392376012 13100011 2566850..2567413 1 NC_013260.1 peptidyl-prolyl cis-trans isomerase 2567413 13100011 DAMO_2973 Candidatus Methylomirabilis oxyfera peptidyl-prolyl cis-trans isomerase YP_003207845.1 2566850 D 671143 CDS YP_003207846.1 392376013 13100010 complement(2567788..2568675) 1 NC_013260.1 Homoserine kinase (HSK) (HK) 2568675 thrB 13100010 thrB Candidatus Methylomirabilis oxyfera Homoserine kinase (HSK) (HK) YP_003207846.1 2567788 R 671143 CDS YP_003207847.1 392376014 13099919 complement(2568638..2568703) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2568703 13099919 DAMO_2975 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207847.1 2568638 R 671143 CDS YP_003207848.1 392376015 13099434 2569060..2569875 1 NC_013260.1 Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) 2569875 proC 13099434 proC Candidatus Methylomirabilis oxyfera Pyrroline-5-carboxylate reductase (P5C reductase) (P5CR) YP_003207848.1 2569060 D 671143 CDS YP_003207849.1 392376016 13098835 2569881..2570183 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2570183 13098835 DAMO_2977 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207849.1 2569881 D 671143 CDS YP_003207850.1 392376017 13099435 2570180..2570488 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2570488 13099435 DAMO_2978 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207850.1 2570180 D 671143 CDS YP_003207851.1 392376018 13098881 complement(2570642..2571910) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2571910 13098881 DAMO_2979 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207851.1 2570642 R 671143 CDS YP_003207852.1 392376019 13099436 complement(2571897..2572682) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Sugar transferase-a glycosyl transferase 2572682 13099436 DAMO_2980 Candidatus Methylomirabilis oxyfera Sugar transferase-a glycosyl transferase YP_003207852.1 2571897 R 671143 CDS YP_003207853.1 392376020 13098875 complement(2572679..2573821) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2573821 13098875 DAMO_2981 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207853.1 2572679 R 671143 CDS YP_003207854.1 392376021 13099437 complement(2573833..2574285) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2574285 13099437 DAMO_2982 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207854.1 2573833 R 671143 CDS YP_003207855.1 392376022 13098845 complement(2574251..2575396) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; glycosyltransferase, group 1 2575396 13098845 DAMO_2983 Candidatus Methylomirabilis oxyfera glycosyltransferase, group 1 YP_003207855.1 2574251 R 671143 CDS YP_003207856.1 392376023 13099438 2575955..2576794 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2576794 13099438 DAMO_2984 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207856.1 2575955 D 671143 CDS YP_003207857.1 392376024 13098678 2576843..2577085 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2577085 13098678 DAMO_2985 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207857.1 2576843 D 671143 CDS YP_003207858.1 392376025 13099439 2577148..2578110 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; fructose 1,6-bisphosphatase, class II 2578110 cbbF 13099439 cbbF Candidatus Methylomirabilis oxyfera fructose 1,6-bisphosphatase, class II YP_003207858.1 2577148 D 671143 CDS YP_003207859.1 392376026 13099440 2578174..2579433 1 NC_013260.1 histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) 2579433 hisS 13099440 hisS Candidatus Methylomirabilis oxyfera histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS) YP_003207859.1 2578174 D 671143 CDS YP_003207860.1 392376027 13099522 2579430..2581211 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) 2581211 aspS 13099522 aspS Candidatus Methylomirabilis oxyfera Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) YP_003207860.1 2579430 D 671143 CDS YP_003207861.1 392376028 13099523 2581430..2582422 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8444794; Product type pt : putative transporter; phosphate starvation-inducible protein, PhoH-like protein 2582422 13099523 DAMO_2989 Candidatus Methylomirabilis oxyfera phosphate starvation-inducible protein, PhoH-like protein YP_003207861.1 2581430 D 671143 CDS YP_003207862.1 392376029 13099524 2582434..2584080 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2584080 13099524 DAMO_2990 Candidatus Methylomirabilis oxyfera membrane protein YP_003207862.1 2582434 D 671143 CDS YP_003207863.1 392376030 13099525 2583989..2584429 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2584429 13099525 DAMO_2991 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207863.1 2583989 D 671143 CDS YP_003207864.1 392376031 13099526 2584432..2584938 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Diacylglycerol kinase 2584938 13099526 DAMO_2992 Candidatus Methylomirabilis oxyfera Diacylglycerol kinase YP_003207864.1 2584432 D 671143 CDS YP_003207865.1 392376032 13099527 2584956..2585858 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10411886; Product type f : factor; GTP-binding protein (era) 2585858 era 13099527 era Candidatus Methylomirabilis oxyfera GTP-binding protein (era) YP_003207865.1 2584956 D 671143 CDS YP_003207866.1 392376033 13099528 2585907..2586656 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; DNA repair protein recO (Recombination protein O) 2586656 13099528 DAMO_2994 Candidatus Methylomirabilis oxyfera DNA repair protein recO (Recombination protein O) YP_003207866.1 2585907 D 671143 CDS YP_003207867.1 392376034 13100025 2586649..2587677 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; alcohol dehydrogenase 2587677 13100025 DAMO_2995 Candidatus Methylomirabilis oxyfera alcohol dehydrogenase YP_003207867.1 2586649 D 671143 CDS YP_003207868.1 392376035 13098443 2587799..2590138 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2590138 13098443 DAMO_2996 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207868.1 2587799 D 671143 CDS YP_003207869.1 392376036 13099924 complement(2590239..2590973) 1 NC_013260.1 hypothetical protein 2590973 13099924 DAMO_2997 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207869.1 2590239 R 671143 CDS YP_003207870.1 392376037 13099529 complement(2591519..2592406) 1 NC_013260.1 tyrosine recombinase XerD 2592406 xerD 13099529 xerD Candidatus Methylomirabilis oxyfera tyrosine recombinase XerD YP_003207870.1 2591519 R 671143 CDS YP_003207871.1 392376038 13099530 complement(2592394..2593575) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Glycosyl transferase, group 1 2593575 13099530 DAMO_2999 Candidatus Methylomirabilis oxyfera Glycosyl transferase, group 1 YP_003207871.1 2592394 R 671143 CDS YP_003207872.1 392376039 13099531 complement(2593643..2595181) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2595181 13099531 DAMO_3000 Candidatus Methylomirabilis oxyfera membrane protein YP_003207872.1 2593643 R 671143 CDS YP_003207873.1 392376040 13099532 complement(2595282..2596031) 1 NC_013260.1 type 4 prepilin-like proteins leader peptide processing enzyme 2596031 13099532 DAMO_3001 Candidatus Methylomirabilis oxyfera type 4 prepilin-like proteins leader peptide processing enzyme YP_003207873.1 2595282 R 671143 CDS YP_003207874.1 392376041 13100178 complement(2596088..2596273) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2596273 13100178 DAMO_3002 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207874.1 2596088 R 671143 CDS YP_003207875.1 392376042 13099533 complement(2596216..2597481) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2597481 13099533 DAMO_3003 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207875.1 2596216 R 671143 CDS YP_003207876.1 392376043 13099534 complement(2597478..2598299) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2598299 13099534 DAMO_3004 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207876.1 2597478 R 671143 CDS YP_003207877.1 392376044 13099535 complement(2598312..2598764) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2598764 13099535 DAMO_3005 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207877.1 2598312 R 671143 CDS YP_003207878.1 392376045 13099536 complement(2598785..2599255) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Type IV pilus biogenesis protein 2599255 13099536 DAMO_3006 Candidatus Methylomirabilis oxyfera Type IV pilus biogenesis protein YP_003207878.1 2598785 R 671143 CDS YP_003207879.1 392376046 13098887 complement(2599392..2599874) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Fimbrial protein pilin 2599874 13098887 DAMO_3007 Candidatus Methylomirabilis oxyfera Fimbrial protein pilin YP_003207879.1 2599392 R 671143 CDS YP_003207880.1 392376047 13099537 2599936..2600157 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2600157 13099537 DAMO_3008 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207880.1 2599936 D 671143 CDS YP_003207881.1 392376048 13099538 complement(2600215..2601597) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator 2601597 13099538 DAMO_3009 Candidatus Methylomirabilis oxyfera response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator YP_003207881.1 2600215 R 671143 CDS YP_003207882.1 392376049 13099539 complement(2601682..2603355) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Multi-sensor signal transduction histidine kinase 2603355 13099539 DAMO_3010 Candidatus Methylomirabilis oxyfera Multi-sensor signal transduction histidine kinase YP_003207882.1 2601682 R 671143 CDS YP_003207883.1 392376050 13099540 complement(2603494..2604708) 1 NC_013260.1 type 4 fimbrial assembly protein pilC 2604708 pilC 13099540 pilC Candidatus Methylomirabilis oxyfera type 4 fimbrial assembly protein pilC YP_003207883.1 2603494 R 671143 CDS YP_003207884.1 392376051 13099541 complement(2604723..2605802) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1676385; Product type t : transporter; transporter 2605802 yggR 13099541 yggR Candidatus Methylomirabilis oxyfera transporter YP_003207884.1 2604723 R 671143 CDS YP_003207885.1 392376052 13099542 complement(2605912..2607609) 1 NC_013260.1 type IV pilus assembly protein tapB 2607609 tapB 13099542 tapB Candidatus Methylomirabilis oxyfera type IV pilus assembly protein tapB YP_003207885.1 2605912 R 671143 CDS YP_003207886.1 392376053 13099543 complement(2607703..2608560) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; shikimate dehydrogenase 2608560 aroE 13099543 aroE Candidatus Methylomirabilis oxyfera shikimate dehydrogenase YP_003207886.1 2607703 R 671143 CDS YP_003207887.1 392376054 13099544 complement(2608681..2611479) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; [Protein-PII] uridylyltransferase (PII uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) 2611479 13099544 DAMO_3015 Candidatus Methylomirabilis oxyfera [Protein-PII] uridylyltransferase (PII uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) YP_003207887.1 2608681 R 671143 CDS YP_003207888.1 392376055 13099545 2611836..2612252 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2612252 13099545 DAMO_3016 Candidatus Methylomirabilis oxyfera membrane protein YP_003207888.1 2611836 D 671143 CDS YP_003207889.1 392376056 13099546 2612282..2613109 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; hypothetical protein 2613109 13099546 DAMO_3017 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207889.1 2612282 D 671143 CDS YP_003207890.1 392376057 13099547 complement(2613120..2615003) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 2615003 13099547 DAMO_3018 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003207890.1 2613120 R 671143 CDS YP_003207891.1 392376058 13099548 complement(2615319..2616164) 1 NC_013260.1 Heat shock protein DnaJ domain protein 2616164 13099548 DAMO_3019 Candidatus Methylomirabilis oxyfera Heat shock protein DnaJ domain protein YP_003207891.1 2615319 R 671143 CDS YP_003207892.1 392376059 13098655 complement(2616170..2617126) 1 NC_013260.1 NUDIX hydrolase 2617126 13098655 DAMO_3020 Candidatus Methylomirabilis oxyfera NUDIX hydrolase YP_003207892.1 2616170 R 671143 CDS YP_003207893.1 392376060 13098901 2617386..2618153 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2618153 13098901 DAMO_3021 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207893.1 2617386 D 671143 CDS YP_003207894.1 392376061 13098833 2618161..2618574 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2618574 13098833 DAMO_3022 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207894.1 2618161 D 671143 CDS YP_003207895.1 392376062 13099917 complement(2618617..2619048) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2619048 13099917 DAMO_3023 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207895.1 2618617 R 671143 CDS YP_003207896.1 392376063 13099549 complement(2619045..2619332) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2619332 13099549 DAMO_3024 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207896.1 2619045 R 671143 CDS YP_003207897.1 392376064 13099550 complement(2619429..2620190) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme; CTP:CMP-3-deoxy-D-manno-octulosonate transferase 2620190 kdsB 13099550 kdsB Candidatus Methylomirabilis oxyfera CTP:CMP-3-deoxy-D-manno-octulosonate transferase YP_003207897.1 2619429 R 671143 CDS YP_003207898.1 392376065 13099551 complement(2620211..2620519) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2620519 13099551 DAMO_3026 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207898.1 2620211 R 671143 CDS YP_003207899.1 392376066 13099552 complement(2620790..2621818) 1 NC_013260.1 adenosine deaminase (Adenosine aminohydrolase) 2621818 add 13099552 add Candidatus Methylomirabilis oxyfera adenosine deaminase (Adenosine aminohydrolase) YP_003207899.1 2620790 R 671143 CDS YP_003207900.1 392376067 13099553 2622093..2623409 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2623409 13099553 DAMO_3028 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207900.1 2622093 D 671143 CDS YP_003207901.1 392376068 13099554 2623516..2624715 1 NC_013260.1 acyl-CoA dehydrogenase 2624715 acdA 13099554 acdA Candidatus Methylomirabilis oxyfera acyl-CoA dehydrogenase YP_003207901.1 2623516 D 671143 CDS YP_003207902.1 392376069 13099555 2624715..2625905 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; L-carnitine dehydrogenase 2625905 13099555 DAMO_3030 Candidatus Methylomirabilis oxyfera L-carnitine dehydrogenase YP_003207902.1 2624715 D 671143 CDS YP_003207903.1 392376070 13099556 complement(2626064..2627380) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2627380 13099556 DAMO_3031 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207903.1 2626064 R 671143 CDS YP_003207904.1 392376071 13099557 complement(2627531..2628283) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2628283 13099557 DAMO_3032 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207904.1 2627531 R 671143 CDS YP_003207905.1 392376072 13099558 2628632..2630572 1 NC_013260.1 Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase 2630572 13099558 DAMO_3033 Candidatus Methylomirabilis oxyfera Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase YP_003207905.1 2628632 D 671143 CDS YP_003207906.1 392376073 13098490 2630547..2631509 1 NC_013260.1 ferrochelatase 2631509 13098490 DAMO_3034 Candidatus Methylomirabilis oxyfera ferrochelatase YP_003207906.1 2630547 D 671143 CDS YP_003207907.1 392376074 13099559 2631530..2633017 1 NC_013260.1 protoporphyrinogen IX and coproporphyrinogen III oxidase 2633017 13099559 DAMO_3035 Candidatus Methylomirabilis oxyfera protoporphyrinogen IX and coproporphyrinogen III oxidase YP_003207907.1 2631530 D 671143 CDS YP_003207908.1 392376075 13099894 2633100..2634368 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2634368 13099894 DAMO_3036 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207908.1 2633100 D 671143 CDS YP_003207909.1 392376076 13099560 2634432..2636105 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 11976094, 8325851; Product type e : enzyme; dihydroxy-acid dehydratase (DAD) 2636105 ilvD 13099560 ilvD Candidatus Methylomirabilis oxyfera dihydroxy-acid dehydratase (DAD) YP_003207909.1 2634432 D 671143 CDS YP_003207910.1 392376077 13099889 2636225..2636860 1 NC_013260.1 protein dedA (Protein DSG-1) 2636860 dedA 13099889 dedA Candidatus Methylomirabilis oxyfera protein dedA (Protein DSG-1) YP_003207910.1 2636225 D 671143 CDS YP_003207911.1 392376078 13099561 2636867..2636950 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2636950 13099561 DAMO_3039 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207911.1 2636867 D 671143 CDS YP_003207912.1 392376079 13099562 2637002..2637175 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2637175 13099562 DAMO_3040 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207912.1 2637002 D 671143 CDS YP_003207913.1 392376080 13099563 2637242..2637772 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2637772 13099563 DAMO_3041 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207913.1 2637242 D 671143 CDS YP_003207914.1 392376081 13099564 2637773..2638624 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2638624 13099564 DAMO_3042 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207914.1 2637773 D 671143 CDS YP_003207915.1 392376082 13099565 complement(2638827..2639072) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2639072 13099565 DAMO_3043 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207915.1 2638827 R 671143 CDS YP_003207916.1 392376083 13099566 2639084..2639350 1 NC_013260.1 addiction module toxin, Txe/YoeB family 2639350 13099566 DAMO_3044 Candidatus Methylomirabilis oxyfera addiction module toxin, Txe/YoeB family YP_003207916.1 2639084 D 671143 CDS YP_003207917.1 392376084 13099567 2639527..2640057 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2640057 13099567 DAMO_3045 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207917.1 2639527 D 671143 CDS YP_003207918.1 392376085 13098466 2640157..2640888 1 NC_013260.1 type-2 restriction enzyme BstVI (R.BstVI) (Type II restriction enzyme BstVI) (Endonuclease BstVI) 2640888 bstVIR 13098466 bstVIR Candidatus Methylomirabilis oxyfera type-2 restriction enzyme BstVI (R.BstVI) (Type II restriction enzyme BstVI) (Endonuclease BstVI) YP_003207918.1 2640157 D 671143 CDS YP_003207919.1 392376086 13100078 2640905..2641801 1 NC_013260.1 methyltransferase 2641801 13100078 DAMO_3047 Candidatus Methylomirabilis oxyfera methyltransferase YP_003207919.1 2640905 D 671143 CDS YP_003207920.1 392376087 13099568 complement(2641841..2642113) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2642113 13099568 DAMO_3048 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207920.1 2641841 R 671143 CDS YP_003207921.1 392376088 13099569 2642130..2643041 1 NC_013260.1 Solute/sodium symporter 2643041 13099569 DAMO_3049 Candidatus Methylomirabilis oxyfera Solute/sodium symporter YP_003207921.1 2642130 D 671143 CDS YP_003207922.1 392376089 13099570 2643251..2643553 1 NC_013260.1 DNA polymerase beta domain-containing protein region 2643553 13099570 DAMO_3050 Candidatus Methylomirabilis oxyfera DNA polymerase beta domain-containing protein region YP_003207922.1 2643251 D 671143 CDS YP_003207923.1 392376090 13099571 2643540..2643890 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2643890 13099571 DAMO_3051 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207923.1 2643540 D 671143 CDS YP_003207924.1 392376091 13099572 2644072..2644185 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2644185 13099572 DAMO_3052 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207924.1 2644072 D 671143 CDS YP_003207925.1 392376092 13099573 2644382..2645008 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2645008 13099573 DAMO_3053 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207925.1 2644382 D 671143 CDS YP_003207926.1 392376093 13099574 complement(2645081..2646190) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2646190 13099574 DAMO_3054 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207926.1 2645081 R 671143 CDS YP_003207927.1 392376094 13100018 complement(2646180..2648726) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2648726 13100018 DAMO_3055 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207927.1 2646180 R 671143 CDS YP_003207928.1 392376095 13099575 complement(2648746..2649423) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; ABC transporter ATP-binding protein 2649423 13099575 DAMO_3056 Candidatus Methylomirabilis oxyfera ABC transporter ATP-binding protein YP_003207928.1 2648746 R 671143 CDS YP_003207929.1 392376096 13099576 2649666..2650220 1 NC_013260.1 outer membrane lipoprotein omp16 (peptidoglycan-associated lipoprotein) 2650220 13099576 DAMO_3057 Candidatus Methylomirabilis oxyfera outer membrane lipoprotein omp16 (peptidoglycan-associated lipoprotein) YP_003207929.1 2649666 D 671143 CDS YP_003207930.1 392376097 13099577 complement(2650231..2651556) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; Na+ antiporter 2651556 13099577 DAMO_3058 Candidatus Methylomirabilis oxyfera Na+ antiporter YP_003207930.1 2650231 R 671143 CDS YP_003207931.1 392376098 13099578 2651584..2652870 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; metallo-phosphoesterase 2652870 13099578 DAMO_3059 Candidatus Methylomirabilis oxyfera metallo-phosphoesterase YP_003207931.1 2651584 D 671143 CDS YP_003207932.1 392376099 13099579 complement(2652811..2653899) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Inner membrane protein yjgQ 2653899 13099579 DAMO_3060 Candidatus Methylomirabilis oxyfera Inner membrane protein yjgQ YP_003207932.1 2652811 R 671143 CDS YP_003207933.1 392376100 13099580 complement(2653875..2654945) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Permease YjgP/YjgQ family protein 2654945 13099580 DAMO_3061 Candidatus Methylomirabilis oxyfera Permease YjgP/YjgQ family protein YP_003207933.1 2653875 R 671143 CDS YP_003207934.1 392376101 13099581 2655085..2655804 1 NC_013260.1 nucleotidyltransferase 2655804 13099581 DAMO_3062 Candidatus Methylomirabilis oxyfera nucleotidyltransferase YP_003207934.1 2655085 D 671143 CDS YP_003207935.1 392376102 13099582 complement(2655833..2656633) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2656633 13099582 DAMO_3063 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207935.1 2655833 R 671143 CDS YP_003207936.1 392376103 13099583 complement(2656630..2657832) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; DNA-binding transcriptional regulator 2657832 yghO 13099583 yghO Candidatus Methylomirabilis oxyfera DNA-binding transcriptional regulator YP_003207936.1 2656630 R 671143 CDS YP_003207937.1 392376104 13099584 2658033..2658248 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2658248 13099584 DAMO_3065 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207937.1 2658033 D 671143 CDS YP_003207938.1 392376105 13099585 2658320..2660146 1 NC_013260.1 AMP-dependent synthetase and ligase 2660146 13099585 DAMO_3066 Candidatus Methylomirabilis oxyfera AMP-dependent synthetase and ligase YP_003207938.1 2658320 D 671143 CDS YP_003207939.1 392376106 13099586 2660125..2661078 1 NC_013260.1 NAD-dependent epimerase/dehydratase 2661078 13099586 DAMO_3067 Candidatus Methylomirabilis oxyfera NAD-dependent epimerase/dehydratase YP_003207939.1 2660125 D 671143 CDS YP_003207940.1 392376107 13099587 2661112..2661360 1 NC_013260.1 phosphopantetheine attachment site 2661360 13099587 DAMO_3068 Candidatus Methylomirabilis oxyfera phosphopantetheine attachment site YP_003207940.1 2661112 D 671143 CDS YP_003207941.1 392376108 13099588 2661357..2662547 1 NC_013260.1 Serine palmitoyltransferase 2662547 13099588 DAMO_3069 Candidatus Methylomirabilis oxyfera Serine palmitoyltransferase YP_003207941.1 2661357 D 671143 CDS YP_003207942.1 392376109 13099589 2662642..2663583 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2663583 13099589 DAMO_3070 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207942.1 2662642 D 671143 CDS YP_003207943.1 392376110 13099590 2663874..2665628 1 NC_013260.1 ABC transporter, transmembrane region:ABC transporter 2665628 13099590 DAMO_3071 Candidatus Methylomirabilis oxyfera ABC transporter, transmembrane region:ABC transporter YP_003207943.1 2663874 D 671143 CDS YP_003207944.1 392376111 13099591 2665813..2667018 1 NC_013260.1 CDP-alcohol phosphatidyltransferase 2667018 13099591 DAMO_3072 Candidatus Methylomirabilis oxyfera CDP-alcohol phosphatidyltransferase YP_003207944.1 2665813 D 671143 CDS YP_003207945.1 392376112 13098903 2667049..2668095 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; DAG-kinase catalytic domain 2668095 13098903 DAMO_3073 Candidatus Methylomirabilis oxyfera DAG-kinase catalytic domain YP_003207945.1 2667049 D 671143 CDS YP_003207946.1 392376113 13099592 2668082..2669203 1 NC_013260.1 Fatty acid desaturase 2669203 13099592 DAMO_3074 Candidatus Methylomirabilis oxyfera Fatty acid desaturase YP_003207946.1 2668082 D 671143 CDS YP_003207947.1 392376114 13099593 2669193..2670155 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2670155 13099593 DAMO_3075 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207947.1 2669193 D 671143 CDS YP_003207948.1 392376115 13099594 2670173..2670688 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2670688 13099594 DAMO_3076 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207948.1 2670173 D 671143 CDS YP_003207949.1 392376116 13099595 2671007..2671450 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2671450 13099595 DAMO_3077 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207949.1 2671007 D 671143 CDS YP_003207950.1 392376117 13099596 2671511..2671678 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2671678 13099596 DAMO_3078 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207950.1 2671511 D 671143 CDS YP_003207951.1 392376118 13099597 2671665..2671928 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2671928 13099597 DAMO_3079 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207951.1 2671665 D 671143 CDS YP_003207952.1 392376119 13099598 complement(2672046..2673578) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; transcriptional regulator 2673578 13099598 DAMO_3080 Candidatus Methylomirabilis oxyfera transcriptional regulator YP_003207952.1 2672046 R 671143 CDS YP_003207953.1 392376120 13099599 complement(2673589..2673978) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2673978 13099599 DAMO_3081 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207953.1 2673589 R 671143 CDS YP_003207954.1 392376121 13099600 complement(2673992..2674579) 1 NC_013260.1 ribonuclease HII 2674579 rnhB 13099600 rnhB Candidatus Methylomirabilis oxyfera ribonuclease HII YP_003207954.1 2673992 R 671143 CDS YP_003207955.1 392376122 13099601 complement(2674750..2675097) 1 NC_013260.1 50S ribosomal protein L19 2675097 rplS 13099601 rplS Candidatus Methylomirabilis oxyfera 50S ribosomal protein L19 YP_003207955.1 2674750 R 671143 CDS YP_003207956.1 392376123 13099602 complement(2675166..2675813) 1 NC_013260.1 tRNA (guanine-N(1)-)-methyltransferase 2675813 trmD 13099602 trmD Candidatus Methylomirabilis oxyfera tRNA (guanine-N(1)-)-methyltransferase YP_003207956.1 2675166 R 671143 CDS YP_003207957.1 392376124 13099684 complement(2675893..2676420) 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type s : structure; 16S rRNA processing protein 2676420 rimM 13099684 rimM Candidatus Methylomirabilis oxyfera 16S rRNA processing protein YP_003207957.1 2675893 R 671143 CDS YP_003207958.1 392376125 13099685 complement(2676421..2676705) 1 NC_013260.1 RNA-binding protein 2676705 13099685 DAMO_3086 Candidatus Methylomirabilis oxyfera RNA-binding protein YP_003207958.1 2676421 R 671143 CDS YP_003207959.1 392376126 13099686 complement(2676745..2677026) 1 NC_013260.1 30S ribosomal protein S16 2677026 rpsP 13099686 rpsP Candidatus Methylomirabilis oxyfera 30S ribosomal protein S16 YP_003207959.1 2676745 R 671143 CDS YP_003207960.1 392376127 13099687 complement(2677082..2678425) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8898086; Product type f : factor; 4.5S-RNP protein 2678425 ffh 13099687 ffh Candidatus Methylomirabilis oxyfera 4.5S-RNP protein YP_003207960.1 2677082 R 671143 CDS YP_003207961.1 392376128 13099688 complement(2678503..2679027) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2679027 13099688 DAMO_3089 Candidatus Methylomirabilis oxyfera membrane protein YP_003207961.1 2678503 R 671143 CDS YP_003207962.1 392376129 13099689 complement(2679045..2679380) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2679380 13099689 DAMO_3090 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207962.1 2679045 R 671143 CDS YP_003207963.1 392376130 13098738 2679416..2679604 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2679604 13098738 DAMO_3091 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207963.1 2679416 D 671143 CDS YP_003207964.1 392376131 13098758 complement(2679606..2680031) 1 NC_013260.1 transcriptional regulator 2680031 13098758 DAMO_3092 Candidatus Methylomirabilis oxyfera transcriptional regulator YP_003207964.1 2679606 R 671143 CDS YP_003207965.1 392376132 13098856 complement(2680172..2680495) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2680495 13098856 DAMO_3093 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207965.1 2680172 R 671143 CDS YP_003207966.1 392376133 13098730 complement(2680471..2680668) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2680668 13098730 DAMO_3094 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207966.1 2680471 R 671143 CDS YP_003207967.1 392376134 13099690 complement(2680868..2681026) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2681026 13099690 DAMO_3095 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207967.1 2680868 R 671143 CDS YP_003207968.1 392376135 13098787 2681044..2681544 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2681544 13098787 DAMO_3096 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207968.1 2681044 D 671143 CDS YP_003207969.1 392376136 13100194 complement(2681528..2682010) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2682010 13100194 DAMO_3097 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207969.1 2681528 R 671143 CDS YP_003207970.1 392376137 13099691 2682268..2682618 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulatory protein, FmdB 2682618 13099691 DAMO_3098 Candidatus Methylomirabilis oxyfera regulatory protein, FmdB YP_003207970.1 2682268 D 671143 CDS YP_003207971.1 392376138 13099692 2682741..2683880 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; Serine-glyoxylate aminotransferase 2683880 sga 13099692 sga Candidatus Methylomirabilis oxyfera Serine-glyoxylate aminotransferase YP_003207971.1 2682741 D 671143 CDS YP_003207972.1 392376139 13099693 2683947..2685527 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; D-3-phosphoglycerate dehydrogenase 2685527 serA 13099693 serA Candidatus Methylomirabilis oxyfera D-3-phosphoglycerate dehydrogenase YP_003207972.1 2683947 D 671143 CDS YP_003207973.1 392376140 13099694 2685578..2686891 1 NC_013260.1 ATP phosphoribosyltransferase regulatory subunit 2686891 hisZ 13099694 hisZ Candidatus Methylomirabilis oxyfera ATP phosphoribosyltransferase regulatory subunit YP_003207973.1 2685578 D 671143 CDS YP_003207974.1 392376141 13099695 2686879..2688189 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10669609, 8244965; Product type e : enzyme; adenylosuccinate synthetase (IMP--aspartate ligase) (AdSS) (AMPSase) 2688189 purA 13099695 purA Candidatus Methylomirabilis oxyfera adenylosuccinate synthetase (IMP--aspartate ligase) (AdSS) (AMPSase) YP_003207974.1 2686879 D 671143 CDS YP_003207975.1 392376142 13099697 complement(2688385..2688576) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2688576 13099697 DAMO_3103 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207975.1 2688385 R 671143 CDS YP_003207976.1 392376143 13099698 2688401..2689411 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8355615; Product type pe : putative enzyme; tRNA-dihydrouridine synthase (Nitrogen regulation protein nifR3) 2689411 13099698 DAMO_3104 Candidatus Methylomirabilis oxyfera tRNA-dihydrouridine synthase (Nitrogen regulation protein nifR3) YP_003207976.1 2688401 D 671143 CDS YP_003207977.1 392376144 13099699 2689417..2689584 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2689584 13099699 DAMO_3105 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207977.1 2689417 D 671143 CDS YP_003207978.1 392376145 13099700 2689894..2690106 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2690106 13099700 DAMO_3106 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207978.1 2689894 D 671143 CDS YP_003207979.1 392376146 13098814 2690304..2692559 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Lysyl endopeptidase 2692559 13098814 DAMO_3107 Candidatus Methylomirabilis oxyfera Lysyl endopeptidase YP_003207979.1 2690304 D 671143 CDS YP_003207980.1 392376147 13098812 2692676..2692996 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2692996 13098812 DAMO_3108 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207980.1 2692676 D 671143 CDS YP_003207981.1 392376148 13098444 2693014..2693829 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2693829 13098444 DAMO_3109 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207981.1 2693014 D 671143 CDS YP_003207982.1 392376149 13098686 2694158..2694358 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2694358 13098686 DAMO_3111 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207982.1 2694158 D 671143 CDS YP_003207983.1 392376150 13099846 2694355..2694609 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2694609 13099846 DAMO_3110 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207983.1 2694355 D 671143 CDS YP_003207984.1 392376151 13099701 complement(2694736..2695248) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2695248 13099701 DAMO_3112 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207984.1 2694736 R 671143 CDS YP_003207985.1 392376152 13099702 complement(2695269..2695970) 1 NC_013260.1 Queuosine biosynthesis protein queC 2695970 queC 13099702 queC Candidatus Methylomirabilis oxyfera Queuosine biosynthesis protein queC YP_003207985.1 2695269 R 671143 CDS YP_003207986.1 392376153 13099703 complement(2696012..2696656) 1 NC_013260.1 radical SAM protein 2696656 13099703 DAMO_3114 Candidatus Methylomirabilis oxyfera radical SAM protein YP_003207986.1 2696012 R 671143 CDS YP_003207987.1 392376154 13099704 complement(2696772..2698256) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 8550509; Product type pe : putative enzyme; Serine protease do-like 2698256 13099704 DAMO_3115 Candidatus Methylomirabilis oxyfera Serine protease do-like YP_003207987.1 2696772 R 671143 CDS YP_003207988.1 392376155 13099705 2698676..2699644 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2699644 13099705 DAMO_3116 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207988.1 2698676 D 671143 CDS YP_003207989.1 392376156 13099706 2699821..2700561 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2700561 13099706 DAMO_3117 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207989.1 2699821 D 671143 CDS YP_003207990.1 392376157 13099707 complement(2700574..2701380) 1 NC_013260.1 type 11 methyltransferase 2701380 13099707 DAMO_3118 Candidatus Methylomirabilis oxyfera type 11 methyltransferase YP_003207990.1 2700574 R 671143 CDS YP_003207991.1 392376158 13099709 complement(2701596..2702504) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; 2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) (KPR) 2702504 13099709 DAMO_3119 Candidatus Methylomirabilis oxyfera 2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) (KPR) YP_003207991.1 2701596 R 671143 CDS YP_003207992.1 392376159 13099708 complement(2702554..2702844) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2702844 13099708 DAMO_3120 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207992.1 2702554 R 671143 CDS YP_003207993.1 392376160 13099710 complement(2702841..2703062) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2703062 13099710 DAMO_3121 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207993.1 2702841 R 671143 CDS YP_003207994.1 392376161 13098708 complement(2703135..2703215) 1 NC_013260.1 hypothetical protein 2703215 13098708 DAMO_3122 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003207994.1 2703135 R 671143 CDS YP_003207995.1 392376162 13099711 complement(2703474..2704832) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator; response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator 2704832 13099711 DAMO_3123 Candidatus Methylomirabilis oxyfera response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator YP_003207995.1 2703474 R 671143 CDS YP_003207996.1 392376163 13099712 complement(2704816..2706162) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Histidine kinase 2706162 13099712 DAMO_3124 Candidatus Methylomirabilis oxyfera Histidine kinase YP_003207996.1 2704816 R 671143 CDS YP_003207997.1 392376164 13099713 2706254..2706835 1 NC_013260.1 NUDIX hydrolase 2706835 13099713 DAMO_3125 Candidatus Methylomirabilis oxyfera NUDIX hydrolase YP_003207997.1 2706254 D 671143 CDS YP_003207998.1 392376165 13099714 complement(2706860..2707762) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Carboxylesterase 2707762 13099714 DAMO_3126 Candidatus Methylomirabilis oxyfera Carboxylesterase YP_003207998.1 2706860 R 671143 CDS YP_003207999.1 392376166 13099715 2707916..2709148 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; membrane protein 2709148 13099715 DAMO_3127 Candidatus Methylomirabilis oxyfera membrane protein YP_003207999.1 2707916 D 671143 CDS YP_003208000.1 392376167 13099716 complement(2709266..2709628) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2709628 13099716 DAMO_3128 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208000.1 2709266 R 671143 CDS YP_003208001.1 392376168 13099717 2709888..2710427 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2710427 13099717 DAMO_3129 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208001.1 2709888 D 671143 CDS YP_003208002.1 392376169 13099718 complement(2710601..2711614) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2711614 13099718 DAMO_3130 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208002.1 2710601 R 671143 CDS YP_003208003.1 392376170 13099719 2711824..2712852 1 NC_013260.1 Rod shape-determining protein mreB 2712852 mreB 13099719 mreB Candidatus Methylomirabilis oxyfera Rod shape-determining protein mreB YP_003208003.1 2711824 D 671143 CDS YP_003208004.1 392376171 13099720 2712943..2713806 1 NC_013260.1 Rod shape-determining protein MreC 2713806 13099720 DAMO_3132 Candidatus Methylomirabilis oxyfera Rod shape-determining protein MreC YP_003208004.1 2712943 D 671143 CDS YP_003208005.1 392376172 13099721 2713803..2714282 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Rod shape-determining protein MreD 2714282 13099721 DAMO_3133 Candidatus Methylomirabilis oxyfera Rod shape-determining protein MreD YP_003208005.1 2713803 D 671143 CDS YP_003208006.1 392376173 13099722 2714282..2716129 1 NC_013260.1 penicillin-binding protein 2 2716129 mrdA 13099722 mrdA Candidatus Methylomirabilis oxyfera penicillin-binding protein 2 YP_003208006.1 2714282 D 671143 CDS YP_003208007.1 392376174 13099723 2716144..2717244 1 NC_013260.1 Rod shape-determining protein rodA 2717244 mrdB 13099723 mrdB Candidatus Methylomirabilis oxyfera Rod shape-determining protein rodA YP_003208007.1 2716144 D 671143 CDS YP_003208008.1 392376175 13099724 2717377..2720202 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2985604, 6390679, 7929087; Product type e : enzyme; isoleucine tRNA synthetase 2720202 ileS 13099724 ileS Candidatus Methylomirabilis oxyfera isoleucine tRNA synthetase YP_003208008.1 2717377 D 671143 CDS YP_003208009.1 392376176 13099725 2720323..2720811 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; PubMedId : 2985604; Product type e : enzyme; Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (SPase II) (Signal peptidase II) 2720811 lspA 13099725 lspA Candidatus Methylomirabilis oxyfera Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (SPase II) (Signal peptidase II) YP_003208009.1 2720323 D 671143 CDS YP_003208010.1 392376177 13099726 2720808..2721752 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type e : enzyme; pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) 2721752 rluD 13099726 rluD Candidatus Methylomirabilis oxyfera pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) YP_003208010.1 2720808 D 671143 CDS YP_003208011.1 392376178 13099727 2722037..2724715 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme; Diguanylate kinase 2724715 13099727 DAMO_3139 Candidatus Methylomirabilis oxyfera Diguanylate kinase YP_003208011.1 2722037 D 671143 CDS YP_003208012.1 392376179 13098557 complement(2724761..2725567) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2725567 13098557 DAMO_3140 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208012.1 2724761 R 671143 CDS YP_003208013.1 392376180 13099728 complement(2725591..2726709) 1 NC_013260.1 Alanine dehydrogenase (Stage V sporulation protein N) 2726709 ald 13099728 ald Candidatus Methylomirabilis oxyfera Alanine dehydrogenase (Stage V sporulation protein N) YP_003208013.1 2725591 R 671143 CDS YP_003208014.1 392376181 13099729 complement(2726959..2727645) 1 NC_013260.1 HAD-superfamily hydrolase 2727645 13099729 DAMO_3142 Candidatus Methylomirabilis oxyfera HAD-superfamily hydrolase YP_003208014.1 2726959 R 671143 CDS YP_003208015.1 392376182 13098555 2727955..2728128 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2728128 13098555 DAMO_3143 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208015.1 2727955 D 671143 CDS YP_003208016.1 392376183 13098556 2728155..2728619 1 NC_013260.1 cytosine deaminase 2728619 FCA 13098556 FCA Candidatus Methylomirabilis oxyfera cytosine deaminase YP_003208016.1 2728155 D 671143 CDS YP_003208017.1 392376184 13098464 2728662..2728904 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2728904 13098464 DAMO_3145 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208017.1 2728662 D 671143 CDS YP_003208018.1 392376185 13098523 2728921..2729121 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2729121 13098523 DAMO_3146 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208018.1 2728921 D 671143 CDS YP_003208019.1 392376186 13098733 complement(2729537..2729653) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2729653 13098733 DAMO_3147 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208019.1 2729537 R 671143 CDS YP_003208020.1 392376187 13099730 complement(2729700..2729783) 1 NC_013260.1 hypothetical protein 2729783 13099730 DAMO_3148 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208020.1 2729700 R 671143 CDS YP_003208021.1 392376188 13099731 complement(2729957..2730301) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2730301 13099731 DAMO_3149 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208021.1 2729957 R 671143 CDS YP_003208022.1 392376189 13099898 2730556..2731221 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2731221 13099898 DAMO_3150 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208022.1 2730556 D 671143 CDS YP_003208023.1 392376190 13099732 2731249..2731908 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Endonuclease III 2731908 13099732 DAMO_3151 Candidatus Methylomirabilis oxyfera Endonuclease III YP_003208023.1 2731249 D 671143 CDS YP_003208024.1 392376191 13099733 complement(2731911..2732333) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2732333 13099733 DAMO_3152 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208024.1 2731911 R 671143 CDS YP_003208025.1 392376192 13100188 complement(2732412..2733644) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2733644 13100188 DAMO_3153 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208025.1 2732412 R 671143 CDS YP_003208026.1 392376193 13099734 complement(2733654..2734397) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter; transporter subunit: ATP-binding component of ABC superfamily 2734397 ybbA 13099734 ybbA Candidatus Methylomirabilis oxyfera transporter subunit: ATP-binding component of ABC superfamily YP_003208026.1 2733654 R 671143 CDS YP_003208027.1 392376194 13099735 complement(2734407..2735846) 1 NC_013260.1 Efflux transporter, RND family, MFP subunit 2735846 13099735 DAMO_3155 Candidatus Methylomirabilis oxyfera Efflux transporter, RND family, MFP subunit YP_003208027.1 2734407 R 671143 CDS YP_003208028.1 392376195 13099736 complement(2735852..2737462) 1 NC_013260.1 Evidence 4 : Homologs of previously reported genes of unknown function; hypothetical protein 2737462 13099736 DAMO_3156 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208028.1 2735852 R 671143 CDS YP_003208029.1 392376196 13099737 complement(2737555..2738064) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2738064 13099737 DAMO_3157 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208029.1 2737555 R 671143 CDS YP_003208030.1 392376197 13099738 complement(2737988..2738539) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2738539 13099738 DAMO_3158 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208030.1 2737988 R 671143 CDS YP_003208031.1 392376198 13099739 complement(2738536..2739195) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; RNA polymerase sigma-H factor (Sigma-30) 2739195 13099739 DAMO_3159 Candidatus Methylomirabilis oxyfera RNA polymerase sigma-H factor (Sigma-30) YP_003208031.1 2738536 R 671143 CDS YP_003208032.1 392376199 13099740 2739485..2739721 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2739721 13099740 DAMO_3160 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208032.1 2739485 D 671143 CDS YP_003208033.1 392376200 13099741 complement(2739584..2739682) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2739682 13099741 DAMO_3161 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208033.1 2739584 R 671143 CDS YP_003208034.1 392376201 13099742 complement(2740066..2740812) 1 NC_013260.1 Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; signal transduction protein with EFhand domain 2740812 13099742 DAMO_3162 Candidatus Methylomirabilis oxyfera signal transduction protein with EFhand domain YP_003208034.1 2740066 R 671143 CDS YP_003208035.1 392376202 13098891 complement(2740946..2741146) 1 NC_013260.1 hypothetical protein 2741146 13098891 DAMO_3163 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208035.1 2740946 R 671143 CDS YP_003208036.1 392376203 13099745 complement(2743340..2744665) 1 NC_013260.1 periplasmic component of efflux system 2744665 13099745 DAMO_3166 Candidatus Methylomirabilis oxyfera periplasmic component of efflux system YP_003208036.1 2743340 R 671143 CDS YP_003208037.1 392376204 13099746 complement(2744709..2744969) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2744969 13099746 DAMO_3167 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208037.1 2744709 R 671143 CDS YP_003208038.1 392376205 13099747 complement(2745020..2745481) 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2745481 13099747 DAMO_3168 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208038.1 2745020 R 671143 CDS YP_003208039.1 392376206 13099748 2745739..2746473 1 NC_013260.1 Evidence 2b : Function of strongly homologous gene; Product type r : regulator; two-component response transcriptional regulator (OmpR family) 2746473 ompR 13099748 ompR Candidatus Methylomirabilis oxyfera two-component response transcriptional regulator (OmpR family) YP_003208039.1 2745739 D 671143 CDS YP_003208040.1 392376207 13099749 2746485..2747930 1 NC_013260.1 periplasmic sensor signal transduction histidine kinase 2747930 13099749 DAMO_3170 Candidatus Methylomirabilis oxyfera periplasmic sensor signal transduction histidine kinase YP_003208040.1 2746485 D 671143 CDS YP_003208041.1 392376208 13099750 complement(2748033..2749490) 1 NC_013260.1 Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8606183, 9880556; Product type e : enzyme; glycolate oxidase subunit GlcD 2749490 glcD 13099750 glcD Candidatus Methylomirabilis oxyfera glycolate oxidase subunit GlcD YP_003208041.1 2748033 R 671143 CDS YP_003208042.1 392376209 13099751 complement(2749511..2750872) 1 NC_013260.1 FAD linked oxidase-like protein 2750872 13099751 DAMO_3172 Candidatus Methylomirabilis oxyfera FAD linked oxidase-like protein YP_003208042.1 2749511 R 671143 CDS YP_003208043.1 392376210 13098527 complement(2750875..2752242) 1 NC_013260.1 glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) 2752242 hemL 13098527 hemL Candidatus Methylomirabilis oxyfera glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) YP_003208043.1 2750875 R 671143 CDS YP_003208044.1 392376211 13098528 2752286..2752564 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2752564 13098528 DAMO_3174 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208044.1 2752286 D 671143 CDS YP_003208045.1 392376212 13099752 2752621..2752845 1 NC_013260.1 Evidence 5 : No homology to any previously reported sequences; hypothetical protein 2752845 13099752 DAMO_3175 Candidatus Methylomirabilis oxyfera hypothetical protein YP_003208045.1 2752621 D 671143 CDS