-- dump date 20140619_023836 -- class Genbank::CDS -- table cds_note -- id note YP_004062240.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004062241.1 COG2861 Uncharacterized protein conserved in bacteria YP_004062242.1 COG3840 ABC-type thiamine transport system, ATPase component YP_004062243.1 COG1178 ABC-type Fe3+ transport system, permease component YP_004062244.1 COG4143 ABC-type thiamine transport system, periplasmic component YP_004062245.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_004062250.1 COG0593 ATPase involved in DNA replication initiation YP_004062251.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_004062252.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_004062256.1 COG0215 Cysteinyl-tRNA synthetase YP_004062257.1 COG2962 Predicted permeases YP_004062258.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_004062259.1 COG0688 Phosphatidylserine decarboxylase YP_004062260.1 COG1183 Phosphatidylserine synthase YP_004062261.1 COG1434 Uncharacterized conserved protein YP_004062262.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004062263.1 COG0500 SAM-dependent methyltransferases YP_004062264.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004062265.1 COG0227 Ribosomal protein L28 YP_004062266.1 COG2214 DnaJ-class molecular chaperone YP_004062267.1 COG0271 Stress-induced morphogen (activity unknown) YP_004062269.1 COG4974 Site-specific recombinase XerD YP_004062270.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_004062271.1 COG3034 Uncharacterized protein conserved in bacteria YP_004062273.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_004062277.1 COG3772 Phage-related lysozyme (muraminidase) YP_004062281.1 COG0457 FOG: TPR repeat YP_004062282.1 COG1968 Uncharacterized bacitracin resistance protein YP_004062283.1 COG0625 Glutathione S-transferase YP_004062284.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004062285.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_004062286.1 COG4986 ABC-type anion transport system, duplicated permease component YP_004062288.1 COG0322 Nuclease subunit of the excinuclease complex YP_004062289.1 COG0558 Phosphatidylglycerophosphate synthase YP_004062290.1 COG0513 Superfamily II DNA and RNA helicases YP_004062291.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004062292.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004062293.1 COG0566 rRNA methylases YP_004062294.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_004062295.1 COG0006 Xaa-Pro aminopeptidase YP_004062296.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_004062297.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004062298.1 COG1409 Predicted phosphohydrolases YP_004062299.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004062300.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004062302.1 COG0104 Adenylosuccinate synthase YP_004062303.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_004062304.1 COG0055 F0F1-type ATP synthase, beta subunit YP_004062305.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_004062306.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_004062307.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_004062309.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_004062310.1 COG1959 Predicted transcriptional regulator YP_004062311.1 COG0071 Molecular chaperone (small heat shock protein) YP_004062312.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_004062313.1 COG0661 Predicted unusual protein kinase YP_004062314.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_004062315.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_004062316.1 COG0268 Ribosomal protein S20 YP_004062317.1 COG0593 ATPase involved in DNA replication initiation YP_004062318.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_004062319.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_004062320.1 COG0689 RNase PH YP_004062321.1 COG1402 Uncharacterized protein, amidase YP_004062322.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_004062323.1 COG1295 Predicted membrane protein YP_004062325.1 COG2086 Electron transfer flavoprotein, beta subunit YP_004062326.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_004062327.1 COG0165 Argininosuccinate lyase YP_004062328.1 COG0019 Diaminopimelate decarboxylase YP_004062330.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_004062332.1 COG2063 Flagellar basal body L-ring protein YP_004062333.1 COG3334 Uncharacterized conserved protein YP_004062334.1 COG1706 Flagellar basal-body P-ring protein YP_004062335.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_004062336.1 COG4786 Flagellar basal body rod protein YP_004062337.1 COG1677 Flagellar hook-basal body protein YP_004062338.1 COG1558 Flagellar basal body rod protein YP_004062339.1 COG1815 Flagellar basal body protein YP_004062340.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_004062341.1 COG4786 Flagellar basal body rod protein YP_004062342.1 COG1291 Flagellar motor component YP_004062343.1 COG1868 Flagellar motor switch protein YP_004062344.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_004062345.1 COG1536 Flagellar motor switch protein YP_004062346.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_004062347.1 COG2771 DNA-binding HTH domain-containing proteins YP_004062348.1 COG2771 DNA-binding HTH domain-containing proteins YP_004062349.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_004062350.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_004062351.1 COG1970 Large-conductance mechanosensitive channel YP_004062352.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_004062354.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004062355.1 COG0642 Signal transduction histidine kinase YP_004062356.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_004062357.1 COG0704 Phosphate uptake regulator YP_004062358.1 COG1117 ABC-type phosphate transport system, ATPase component YP_004062359.1 COG0581 ABC-type phosphate transport system, permease component YP_004062360.1 COG0573 ABC-type phosphate transport system, permease component YP_004062361.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_004062362.1 COG2917 Intracellular septation protein A YP_004062363.1 COG0552 Signal recognition particle GTPase YP_004062364.1 COG0253 Diaminopimelate epimerase YP_004062365.1 COG0541 Signal recognition particle GTPase YP_004062366.1 COG0228 Ribosomal protein S16 YP_004062367.1 COG0806 RimM protein, required for 16S rRNA processing YP_004062368.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_004062369.1 COG0335 Ribosomal protein L19 YP_004062370.1 COG0362 6-phosphogluconate dehydrogenase YP_004062371.1 COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin YP_004062372.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_004062373.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_004062374.1 COG1528 Ferritin-like protein YP_004062375.1 COG2064 Flp pilus assembly protein TadC YP_004062376.1 COG4965 Flp pilus assembly protein TadB YP_004062377.1 COG4962 Flp pilus assembly protein, ATPase CpaF YP_004062378.1 COG0784 FOG: CheY-like receiver YP_004062380.1 COG4964 Flp pilus assembly protein, secretin CpaC YP_004062381.1 COG3745 Flp pilus assembly protein CpaB YP_004062382.1 COG4960 Flp pilus assembly protein, protease CpaA YP_004062385.1 COG3847 Flp pilus assembly protein, pilin Flp YP_004062386.1 COG3847 Flp pilus assembly protein, pilin Flp YP_004062391.1 COG2835 Uncharacterized conserved protein YP_004062392.1 COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease YP_004062393.1 COG0019 Diaminopimelate decarboxylase YP_004062394.1 COG1748 Saccharopine dehydrogenase and related proteins YP_004062395.1 COG1573 Uracil-DNA glycosylase YP_004062396.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_004062397.1 COG1934 Uncharacterized protein conserved in bacteria YP_004062399.1 COG0616 Periplasmic serine proteases (ClpP class) YP_004062400.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004062401.1 COG0597 Lipoprotein signal peptidase YP_004062402.1 COG0249 Mismatch repair ATPase (MutS family) YP_004062403.1 COG1530 Ribonucleases G and E YP_004062404.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_004062405.1 COG1186 Protein chain release factor B YP_004062406.1 COG0061 Predicted sugar kinase YP_004062407.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_004062408.1 COG4123 Predicted O-methyltransferase YP_004062409.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_004062410.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004062411.1 COG3772 Phage-related lysozyme (muraminidase) YP_004062413.1 COG2217 Cation transport ATPase YP_004062431.1 COG1396 Predicted transcriptional regulators YP_004062435.1 COG3617 Prophage antirepressor YP_004062441.1 COG4271 Predicted nucleotide-binding protein containing TIR -like domain YP_004062442.1 COG0840 Methyl-accepting chemotaxis protein YP_004062444.1 COG3378 Predicted ATPase YP_004062452.1 COG2887 RecB family exonuclease YP_004062453.1 COG3646 Uncharacterized phage-encoded protein YP_004062454.1 COG3617 Prophage antirepressor YP_004062456.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_004062458.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004062459.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_004062460.1 COG0194 Guanylate kinase YP_004062463.1 COG0582 Integrase YP_004062464.1 COG0009 translation factor (SUA5) YP_004062465.1 COG0277 FAD/FMN-containing dehydrogenases YP_004062466.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_004062467.1 COG0718 Uncharacterized protein conserved in bacteria YP_004062469.1 COG2812 DNA polymerase III, gamma/tau subunits YP_004062470.1 COG3807 Uncharacterized protein conserved in bacteria YP_004062471.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_004062472.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_004062473.1 COG0763 Lipid A disaccharide synthetase YP_004062474.1 COG3494 Uncharacterized protein conserved in bacteria YP_004062475.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_004062476.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_004062477.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_004062478.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_004062479.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_004062480.1 COG0575 CDP-diglyceride synthetase YP_004062481.1 COG0020 Undecaprenyl pyrophosphate synthase YP_004062482.1 COG0233 Ribosome recycling factor YP_004062483.1 COG0528 Uridylate kinase YP_004062484.1 COG0264 Translation elongation factor Ts YP_004062485.1 COG0052 Ribosomal protein S2 YP_004062486.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_004062487.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_004062488.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004062495.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_004062496.1 COG0184 Ribosomal protein S15P/S13E YP_004062497.1 COG0858 Ribosome-binding factor A YP_004062498.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_004062499.1 COG0195 Transcription elongation factor YP_004062500.1 COG0779 Uncharacterized protein conserved in bacteria YP_004062502.1 COG1570 Exonuclease VII, large subunit YP_004062503.1 COG2309 Leucyl aminopeptidase (aminopeptidase T) YP_004062504.1 COG0728 Uncharacterized membrane protein, virulence factor YP_004062505.1 COG0180 Tryptophanyl-tRNA synthetase YP_004062506.1 COG2334 homoserine kinase type II (protein kinase fold) YP_004062507.1 COG0328 Ribonuclease HI YP_004062508.1 COG0708 Exonuclease III YP_004062510.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_004062511.1 COG3820 Uncharacterized protein conserved in bacteria YP_004062512.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_004062513.1 COG0495 Leucyl-tRNA synthetase YP_004062517.1 COG1475 Predicted transcriptional regulators YP_004062518.1 COG1192 ATPases involved in chromosome partitioning YP_004062519.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_004062520.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_004062521.1 COG0486 Predicted GTPase YP_004062522.1 COG1158 Transcription termination factor YP_004062523.1 COG1981 Predicted membrane protein YP_004062524.1 COG0407 Uroporphyrinogen-III decarboxylase YP_004062525.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_004062526.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_004062528.1 COG4395 Uncharacterized protein conserved in bacteria YP_004062530.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_004062531.1 COG0237 Dephospho-CoA kinase YP_004062532.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_004062533.1 COG0285 Folylpolyglutamate synthase YP_004062534.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004062535.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_004062536.1 COG3893 Inactivated superfamily I helicase YP_004062537.1 COG0802 Predicted ATPase or kinase YP_004062538.1 COG0642 Signal transduction histidine kinase YP_004062539.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_004062540.1 COG1072 Panthothenate kinase YP_004062541.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_004062542.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_004062543.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_004062544.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004062545.1 COG0132 Dethiobiotin synthetase YP_004062546.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_004062547.1 COG0502 Biotin synthase and related enzymes YP_004062548.1 COG0548 Acetylglutamate kinase YP_004062549.1 COG0218 Predicted GTPase YP_004062550.1 COG0706 Preprotein translocase subunit YidC YP_004062551.1 COG0594 RNase P protein component YP_004062552.1 COG0230 Ribosomal protein L34 YP_004062553.1 COG0717 Deoxycytidine deaminase YP_004062554.1 COG1194 A/G-specific DNA glycosylase YP_004062556.1 COG1651 Protein-disulfide isomerase YP_004062557.1 COG0784 FOG: CheY-like receiver YP_004062558.1 COG0267 Ribosomal protein L33 YP_004062559.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_004062560.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_004062561.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_004062562.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_004062563.1 COG0361 Translation initiation factor 1 (IF-1) YP_004062564.1 COG3024 Uncharacterized protein conserved in bacteria YP_004062565.1 COG2199 FOG: GGDEF domain YP_004062566.1 COG1722 Exonuclease VII small subunit YP_004062567.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_004062568.1 COG0863 DNA modification methylase YP_004062569.1 COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport YP_004062571.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_004062572.1 COG2822 Predicted periplasmic lipoprotein involved in iron transport YP_004062573.1 COG2837 Predicted iron-dependent peroxidase YP_004062575.1 COG0498 Threonine synthase YP_004062576.1 COG0612 Predicted Zn-dependent peptidases YP_004062578.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_004062579.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004062580.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_004062583.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_004062584.1 COG0283 Cytidylate kinase YP_004062585.1 COG0539 Ribosomal protein S1 YP_004062586.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_004062587.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_004062588.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_004062589.1 COG0670 Integral membrane protein, interacts with FtsH YP_004062590.1 COG1048 Aconitase A YP_004062591.1 COG0642 Signal transduction histidine kinase YP_004062595.1 COG0060 Isoleucyl-tRNA synthetase YP_004062596.1 COG1158 Transcription termination factor YP_004062597.1 COG5480 Predicted integral membrane protein YP_004062598.1 COG0469 Pyruvate kinase YP_004062599.1 COG0438 Glycosyltransferase YP_004062600.1 COG0782 Transcription elongation factor YP_004062601.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_004062602.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_004062603.1 COG0828 Ribosomal protein S21 YP_004062604.1 COG0457 FOG: TPR repeat YP_004062606.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_004062607.1 COG0167 Dihydroorotate dehydrogenase YP_004062608.1 COG0078 Ornithine carbamoyltransferase YP_004062609.1 COG4992 Ornithine/acetylornithine aminotransferase YP_004062611.1 COG0694 Thioredoxin-like proteins and domains YP_004062612.1 COG1214 Inactive homolog of metal-dependent proteases, molecular chaperone YP_004062613.1 COG0621 2-methylthioadenine synthetase YP_004062616.1 COG0319 Predicted metal-dependent hydrolase YP_004062617.1 COG1253 Hemolysins and related proteins containing CBS domains YP_004062618.1 COG0815 Apolipoprotein N-acyltransferase YP_004062619.1 COG1396 Predicted transcriptional regulators YP_004062620.1 COG0192 S-adenosylmethionine synthetase YP_004062621.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_004062622.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_004062623.1 COG1160 Predicted GTPases YP_004062624.1 COG0457 FOG: TPR repeat YP_004062625.1 COG0505 Carbamoylphosphate synthase small subunit YP_004062626.1 COG0173 Aspartyl-tRNA synthetase YP_004062627.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_004062628.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_004062629.1 COG1146 Ferredoxin YP_004062630.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_004062631.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_004062632.1 COG5002 Signal transduction histidine kinase YP_004062635.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_004062636.1 COG1565 Uncharacterized conserved protein YP_004062637.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_004062638.1 COG5508 Uncharacterized conserved small protein YP_004062640.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_004062641.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_004062642.1 COG0288 Carbonic anhydrase YP_004062643.1 COG2902 NAD-specific glutamate dehydrogenase YP_004062644.1 COG2925 Exonuclease I YP_004062645.1 COG0217 Uncharacterized conserved protein YP_004062646.1 COG1692 Uncharacterized protein conserved in bacteria YP_004062647.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_004062648.1 COG0021 Transketolase YP_004062649.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_004062650.1 COG0126 3-phosphoglycerate kinase YP_004062651.1 COG3588 Fructose-1,6-bisphosphate aldolase YP_004062654.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_004062655.1 COG0536 Predicted GTPase YP_004062656.1 COG0211 Ribosomal protein L27 YP_004062657.1 COG0261 Ribosomal protein L21 YP_004062659.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004062660.1 COG0443 Molecular chaperone YP_004062661.1 COG0349 Ribonuclease D YP_004062662.1 COG3487 Uncharacterized iron-regulated protein YP_004062663.1 COG1495 Disulfide bond formation protein DsbB YP_004062664.1 COG1210 UDP-glucose pyrophosphorylase YP_004062665.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_004062666.1 COG3004 Na+/H+ antiporter YP_004062667.1 COG0333 Ribosomal protein L32 YP_004062668.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_004062669.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004062670.1 COG0590 Cytosine/adenosine deaminases YP_004062671.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_004062672.1 COG0742 N6-adenine-specific methylase YP_004062673.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_004062675.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_004062676.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_004062677.1 COG1734 DnaK suppressor protein YP_004062678.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_004062679.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_004062680.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_004062681.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_004062682.1 COG1452 Organic solvent tolerance protein OstA YP_004062683.1 COG0795 Predicted permeases YP_004062685.1 COG0260 Leucyl aminopeptidase YP_004062686.1 COG2927 DNA polymerase III, chi subunit YP_004062687.1 COG0105 Nucleoside diphosphate kinase YP_004062689.1 COG1301 Na+/H+-dicarboxylate symporters YP_004062690.1 COG0845 Membrane-fusion protein YP_004062691.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_004062692.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_004062693.1 COG0177 Predicted EndoIII-related endonuclease YP_004062695.1 COG0513 Superfamily II DNA and RNA helicases YP_004062696.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004062697.1 COG0496 Predicted acid phosphatase YP_004062698.1 COG0172 Seryl-tRNA synthetase YP_004062701.1 COG2867 Oligoketide cyclase/lipid transport protein YP_004062702.1 COG0320 Lipoate synthase YP_004062703.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004062704.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004062705.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004062706.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_004062707.1 COG2919 Septum formation initiator YP_004062708.1 COG0148 Enolase YP_004062709.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_004062710.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_004062711.1 COG0372 Citrate synthase YP_004062712.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_004062713.1 COG0113 Delta-aminolevulinic acid dehydratase YP_004062714.1 COG1846 Transcriptional regulators YP_004062715.1 COG2989 Uncharacterized protein conserved in bacteria YP_004062716.1 COG0112 Glycine/serine hydroxymethyltransferase YP_004062717.1 COG0117 Pyrimidine deaminase YP_004062718.1 COG0307 Riboflavin synthase alpha chain YP_004062719.1 COG0054 Riboflavin synthase beta-chain YP_004062720.1 COG0781 Transcription termination factor YP_004062721.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_004062722.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_004062723.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_004062724.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_004062725.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_004062726.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004062727.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_004062728.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_004062730.1 COG1066 Predicted ATP-dependent serine protease YP_004062731.1 COG0787 Alanine racemase YP_004062732.1 COG0305 Replicative DNA helicase YP_004062733.1 COG0359 Ribosomal protein L9 YP_004062734.1 COG0238 Ribosomal protein S18 YP_004062735.1 COG0360 Ribosomal protein S6 YP_004062736.1 COG1087 UDP-glucose 4-epimerase YP_004062737.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_004062738.1 COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) YP_004062739.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004062741.1 COG3202 ATP/ADP translocase YP_004062742.1 COG0500 SAM-dependent methyltransferases YP_004062743.1 COG0481 Membrane GTPase LepA YP_004062745.1 COG0290 Translation initiation factor 3 (IF-3) YP_004062746.1 COG0291 Ribosomal protein L35 YP_004062747.1 COG0292 Ribosomal protein L20 YP_004062748.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_004062749.1 COG0073 EMAP domain YP_004062750.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_004062751.1 COG0293 23S rRNA methylase YP_004062753.1 COG0784 FOG: CheY-like receiver YP_004062754.1 COG0678 Peroxiredoxin YP_004062755.1 COG1040 Predicted amidophosphoribosyltransferases YP_004062756.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_004062757.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_004062758.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_004062759.1 COG0550 Topoisomerase IA YP_004062761.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_004062762.1 COG0344 Predicted membrane protein YP_004062763.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_004062764.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_004062765.1 COG1960 Acyl-CoA dehydrogenases YP_004062766.1 COG1344 Flagellin and related hook-associated proteins YP_004062768.1 COG1360 Flagellar motor protein YP_004062769.1 COG1360 Flagellar motor protein YP_004062772.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004062773.1 COG1749 Flagellar hook protein FlgE YP_004062774.1 COG1256 Flagellar hook-associated protein YP_004062775.1 COG1344 Flagellin and related hook-associated proteins YP_004062778.1 COG1843 Flagellar hook capping protein YP_004062779.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_004062780.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_004062781.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_004062785.1 COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) YP_004062786.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_004062787.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_004062788.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_004062789.1 COG0174 Glutamine synthetase YP_004062790.1 COG0208 Ribonucleotide reductase, beta subunit YP_004062800.1 COG0209 Ribonucleotide reductase, alpha subunit YP_004062802.1 COG2913 Small protein A (tmRNA-binding) YP_004062804.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_004062805.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_004062806.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004062807.1 COG0605 Superoxide dismutase YP_004062808.1 COG3965 Predicted Co/Zn/Cd cation transporters YP_004062816.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_004062817.1 COG3772 Phage-related lysozyme (muraminidase) YP_004062818.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_004062819.1 COG0489 ATPases involved in chromosome partitioning YP_004062820.1 COG3158 K+ transporter YP_004062821.1 COG2899 Uncharacterized protein conserved in bacteria YP_004062822.1 COG0205 6-phosphofructokinase YP_004062823.1 COG0012 Predicted GTPase, translation factor YP_004062824.1 COG0193 Peptidyl-tRNA hydrolase YP_004062826.1 COG0628 Predicted permease YP_004062827.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_004062828.1 COG0125 Thymidylate kinase YP_004062829.1 COG0470 ATPase involved in DNA replication YP_004062830.1 COG0143 Methionyl-tRNA synthetase YP_004062831.1 COG0084 Mg-dependent DNase YP_004062832.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_004062835.1 COG3772 Phage-related lysozyme (muraminidase) YP_004062836.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004062837.1 COG0797 Lipoproteins YP_004062838.1 COG1432 Uncharacterized conserved protein YP_004062839.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_004062840.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_004062841.1 COG0681 Signal peptidase I YP_004062842.1 COG0571 dsRNA-specific ribonuclease YP_004062843.1 COG1159 GTPase YP_004062844.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_004062845.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_004062846.1 COG2928 Uncharacterized conserved protein YP_004062847.1 COG1200 RecG-like helicase YP_004062848.1 COG2938 Uncharacterized conserved protein YP_004062849.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_004062850.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_004062851.1 COG0162 Tyrosyl-tRNA synthetase YP_004062860.1 COG0603 Predicted PP-loop superfamily ATPase YP_004062861.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_004062862.1 COG0457 FOG: TPR repeat YP_004062864.1 COG1587 Uroporphyrinogen-III synthase YP_004062865.1 COG0181 Porphobilinogen deaminase YP_004062866.1 COG0533 Metal-dependent proteases with chaperone activity YP_004062867.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_004062868.1 COG2947 Uncharacterized conserved protein YP_004062869.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_004062870.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_004062871.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_004062872.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_004062874.1 COG1485 Predicted ATPase YP_004062875.1 COG0039 Malate/lactate dehydrogenases YP_004062876.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_004062877.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_004062878.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_004062879.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004062880.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004062881.1 COG0120 Ribose 5-phosphate isomerase YP_004062882.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004062883.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_004062884.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_004062886.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_004062891.1 COG0520 Selenocysteine lyase YP_004062892.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_004062893.1 COG0316 Uncharacterized conserved protein YP_004062894.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_004062895.1 COG0388 Predicted amidohydrolase YP_004062896.1 COG0441 Threonyl-tRNA synthetase YP_004062897.1 COG1278 Cold shock proteins YP_004062899.1 COG2001 Uncharacterized protein conserved in bacteria YP_004062900.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_004062901.1 COG5462 Predicted secreted (periplasmic) protein YP_004062902.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004062903.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_004062904.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_004062905.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_004062906.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_004062907.1 COG0772 Bacterial cell division membrane protein YP_004062908.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_004062909.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_004062910.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_004062911.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_004062917.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_004062918.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_004062919.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_004062921.1 COG0356 F0F1-type ATP synthase, subunit a YP_004062922.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_004062923.1 COG0711 F0F1-type ATP synthase, subunit b YP_004062950.1 COG3750 Uncharacterized protein conserved in bacteria YP_004062951.1 COG2199 FOG: GGDEF domain YP_004062953.1 COG0164 Ribonuclease HII YP_004062954.1 COG0692 Uracil DNA glycosylase YP_004062955.1 COG0692 Uracil DNA glycosylase YP_004062956.1 COG0408 Coproporphyrinogen III oxidase YP_004062961.1 COG0033 Phosphoglucomutase YP_004062962.1 COG4961 Flp pilus assembly protein TadG YP_004062969.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_004062970.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_004062971.1 COG0765 ABC-type amino acid transport system, permease component YP_004062972.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_004062973.1 COG0730 Predicted permeases YP_004062974.1 COG1607 Acyl-CoA hydrolase YP_004062975.1 COG0556 Helicase subunit of the DNA excision repair complex YP_004062977.1 COG1396 Predicted transcriptional regulators YP_004062982.1 COG3378 Predicted ATPase YP_004062985.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004062986.1 COG0560 Phosphoserine phosphatase YP_004062987.1 COG3772 Phage-related lysozyme (muraminidase) YP_004062988.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004062989.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004062990.1 COG0262 Dihydrofolate reductase YP_004062991.1 COG0207 Thymidylate synthase YP_004062992.1 COG3814 Uncharacterized protein conserved in bacteria YP_004062994.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004062995.1 COG0210 Superfamily I DNA and RNA helicases YP_004062996.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_004062997.1 COG1257 Hydroxymethylglutaryl-CoA reductase YP_004062998.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_004062999.1 COG3425 3-hydroxy-3-methylglutaryl CoA synthase YP_004063000.1 COG1577 Mevalonate kinase YP_004063001.1 COG1577 Mevalonate kinase YP_004063002.1 COG3407 Mevalonate pyrophosphate decarboxylase YP_004063004.1 COG0477 Permeases of the major facilitator superfamily YP_004063005.1 COG0418 Dihydroorotase YP_004063006.1 COG0461 Orotate phosphoribosyltransferase YP_004063007.1 COG1280 threonine efflux protein YP_004063008.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_004063009.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_004063010.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_004063011.1 COG0816 Predicted endonuclease involved in recombination ( Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_004063014.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_004063020.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_004063025.1 COG5565 Bacteriophage terminase large (ATPase) subunit and inactivated derivatives YP_004063028.1 COG1396 Predicted transcriptional regulators YP_004063029.1 COG0305 Replicative DNA helicase YP_004063030.1 COG3756 Uncharacterized protein conserved in bacteria YP_004063033.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_004063034.1 COG1385 Uncharacterized protein conserved in bacteria YP_004063035.1 COG3572 Gamma-glutamylcysteine synthetase YP_004063036.1 COG3153 Predicted acetyltransferase YP_004063037.1 COG0259 Pyridoxamine-phosphate oxidase YP_004063038.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_004063041.1 COG0042 tRNA-dihydrouridine synthase YP_004063049.1 COG3037 Uncharacterized protein conserved in bacteria YP_004063050.1 COG0415 Deoxyribodipyrimidine photolyase YP_004063052.1 COG1301 Na+/H+-dicarboxylate symporters YP_004063054.1 COG3772 Phage-related lysozyme (muraminidase) YP_004063056.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_004063057.1 COG0497 ATPase involved in DNA repair YP_004063058.1 COG4105 DNA uptake lipoprotein YP_004063059.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_004063060.1 COG0206 Cell division GTPase YP_004063061.1 COG0849 Actin-like ATPase involved in cell division YP_004063062.1 COG1589 Cell division septal protein YP_004063063.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_004063066.1 COG3600 Uncharacterized phage-associated protein YP_004063067.1 COG1396 Predicted transcriptional regulators YP_004063068.1 COG0582 Integrase YP_004063069.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_004063070.1 COG1862 Preprotein translocase subunit YajC YP_004063071.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_004063072.1 COG1190 Lysyl-tRNA synthetase (class II) YP_004063073.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_004063075.1 COG1564 Thiamine pyrophosphokinase YP_004063076.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004063077.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_004063078.1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) YP_004063079.1 COG1509 Lysine 2,3-aminomutase YP_004063084.1 COG0049 Ribosomal protein S7 YP_004063086.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_004063087.1 COG1539 Dihydroneopterin aldolase YP_004063088.1 COG0294 Dihydropteroate synthase and related enzymes YP_004063091.1 COG0606 Predicted ATPase with chaperone activity YP_004063092.1 COG0606 Predicted ATPase with chaperone activity YP_004063093.1 COG0756 dUTPase YP_004063094.1 COG0644 Dehydrogenases (flavoproteins) YP_004063096.1 COG0036 Pentose-5-phosphate-3-epimerase YP_004063097.1 COG0015 Adenylosuccinate lyase YP_004063098.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_004063099.1 COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component YP_004063100.1 COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain YP_004063101.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_004063102.1 COG0271 Stress-induced morphogen (activity unknown) YP_004063103.1 COG0278 Glutaredoxin-related protein YP_004063104.1 COG0477 Permeases of the major facilitator superfamily YP_004063105.1 COG2066 Glutaminase YP_004063106.1 COG0522 Ribosomal protein S4 and related proteins YP_004063107.1 COG0796 Glutamate racemase YP_004063108.1 COG0565 rRNA methylase YP_004063109.1 COG0642 Signal transduction histidine kinase YP_004063110.1 COG0538 Isocitrate dehydrogenases YP_004063111.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_004063112.1 COG1314 Preprotein translocase subunit SecG YP_004063113.1 COG0149 Triosephosphate isomerase YP_004063116.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_004063117.1 COG3754 Lipopolysaccharide biosynthesis protein YP_004063118.1 COG0602 Organic radical activating enzymes YP_004063119.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_004063120.1 COG0151 Phosphoribosylamine-glycine ligase YP_004063126.1 COG0582 Integrase YP_004063127.1 COG0582 Integrase YP_004063129.1 COG1225 Peroxiredoxin YP_004063131.1 COG0525 Valyl-tRNA synthetase YP_004063132.1 COG3827 Uncharacterized protein conserved in bacteria YP_004063133.1 COG1538 Outer membrane protein YP_004063134.1 COG0124 Histidyl-tRNA synthetase YP_004063135.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_004063138.1 COG0342 Preprotein translocase subunit SecD YP_004063139.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component YP_004063140.1 COG3754 Lipopolysaccharide biosynthesis protein YP_004063141.1 COG1209 dTDP-glucose pyrophosphorylase YP_004063142.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_004063143.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_004063144.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_004063145.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004063146.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004063147.1 COG0788 Formyltetrahydrofolate hydrolase YP_004063148.1 COG0194 Guanylate kinase YP_004063154.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004063155.1 COG1562 Phytoene/squalene synthetase YP_004063156.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004063157.1 COG2127 Uncharacterized conserved protein YP_004063159.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004063160.1 COG4391 Uncharacterized protein conserved in bacteria YP_004063161.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004063162.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_004063163.1 COG4597 ABC-type amino acid transport system, permease component YP_004063164.1 COG0765 ABC-type amino acid transport system, permease component YP_004063165.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_004063167.1 COG3772 Phage-related lysozyme (muraminidase) YP_004063169.1 COG0608 Single-stranded DNA-specific exonuclease YP_004063170.1 COG0460 Homoserine dehydrogenase YP_004063171.1 COG0024 Methionine aminopeptidase YP_004063172.1 COG2003 DNA repair proteins YP_004063173.1 COG2365 Protein tyrosine/serine phosphatase YP_004063174.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_004063175.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_004063179.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004063180.1 COG0784 FOG: CheY-like receiver YP_004063183.1 COG0516 IMP dehydrogenase/GMP reductase YP_004063185.1 COG0302 GTP cyclohydrolase I YP_004063186.1 COG0759 Uncharacterized conserved protein YP_004063187.1 COG0582 Integrase YP_004063189.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004063190.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004063192.1 COG2890 Methylase of polypeptide chain release factors YP_004063193.1 COG0216 Protein chain release factor A YP_004063194.1 COG0527 Aspartokinases YP_004063195.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_004063196.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004063197.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_004063198.1 COG0442 Prolyl-tRNA synthetase YP_004063199.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_004063200.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_004063201.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_004063202.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_004063203.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_004063204.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_004063205.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_004063206.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_004063207.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_004063208.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_004063210.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_004063211.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_004063212.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_004063213.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_004063214.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_004063215.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_004063216.1 COG0459 Chaperonin GroEL (HSP60 family) YP_004063217.1 COG0234 Co-chaperonin GroES (HSP10) YP_004063218.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_004063219.1 COG0196 FAD synthase YP_004063221.1 COG0738 Fucose permease YP_004063222.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004063223.1 COG1183 Phosphatidylserine synthase YP_004063224.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_004063225.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004063226.1 COG1164 Oligoendopeptidase F YP_004063227.1 COG0281 Malic enzyme YP_004063229.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_004063230.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_004063231.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_004063232.1 COG3218 ABC-type uncharacterized transport system, auxiliary component YP_004063233.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_004063234.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_004063235.1 COG0222 Ribosomal protein L7/L12 YP_004063236.1 COG0244 Ribosomal protein L10 YP_004063237.1 COG0081 Ribosomal protein L1 YP_004063238.1 COG0080 Ribosomal protein L11 YP_004063239.1 COG0250 Transcription antiterminator YP_004063240.1 COG0690 Preprotein translocase subunit SecE YP_004063241.1 COG0050 GTPases - translation elongation factors YP_004063242.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_004063244.1 COG1932 Phosphoserine aminotransferase YP_004063245.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_004063246.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_004063247.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_004063249.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_004063250.1 COG0114 Fumarase YP_004063251.1 COG0013 Alanyl-tRNA synthetase YP_004063252.1 COG0468 RecA/RadA recombinase YP_004063253.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004063254.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004063255.1 COG0254 Ribosomal protein L31 YP_004063256.1 COG3772 Phage-related lysozyme (muraminidase) YP_004063259.1 COG2217 Cation transport ATPase YP_004063265.1 COG0321 Lipoate-protein ligase B YP_004063266.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_004063267.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_004063268.1 COG0669 Phosphopantetheine adenylyltransferase YP_004063269.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_004063270.1 COG0629 Single-stranded DNA-binding protein YP_004063271.1 COG0178 Excinuclease ATPase subunit YP_004063272.1 COG0174 Glutamine synthetase YP_004063273.1 COG0358 DNA primase (bacterial type) YP_004063274.1 COG0587 DNA polymerase III, alpha subunit YP_004063275.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_004063278.1 COG0221 Inorganic pyrophosphatase YP_004063279.1 COG1217 Predicted membrane GTPase involved in stress response YP_004063280.1 COG0137 Argininosuccinate synthase YP_004063282.1 COG0203 Ribosomal protein L17 YP_004063283.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_004063284.1 COG0100 Ribosomal protein S11 YP_004063285.1 COG0099 Ribosomal protein S13 YP_004063286.1 COG0563 Adenylate kinase and related kinases YP_004063287.1 COG0201 Preprotein translocase subunit SecY YP_004063288.1 COG0200 Ribosomal protein L15 YP_004063289.1 COG1841 Ribosomal protein L30/L7E YP_004063290.1 COG0098 Ribosomal protein S5 YP_004063291.1 COG0256 Ribosomal protein L18 YP_004063292.1 COG0097 Ribosomal protein L6P/L9E YP_004063293.1 COG0096 Ribosomal protein S8 YP_004063294.1 COG0199 Ribosomal protein S14 YP_004063295.1 COG0094 Ribosomal protein L5 YP_004063296.1 COG0198 Ribosomal protein L24 YP_004063297.1 COG0093 Ribosomal protein L14 YP_004063298.1 COG0186 Ribosomal protein S17 YP_004063299.1 COG0255 Ribosomal protein L29 YP_004063300.1 COG0197 Ribosomal protein L16/L10E YP_004063301.1 COG0092 Ribosomal protein S3 YP_004063302.1 COG0091 Ribosomal protein L22 YP_004063303.1 COG0185 Ribosomal protein S19 YP_004063304.1 COG0090 Ribosomal protein L2 YP_004063305.1 COG0089 Ribosomal protein L23 YP_004063306.1 COG0088 Ribosomal protein L4 YP_004063307.1 COG0087 Ribosomal protein L3 YP_004063308.1 COG0051 Ribosomal protein S10 YP_004063309.1 COG0050 GTPases - translation elongation factors YP_004063310.1 COG0480 Translation elongation factors (GTPases) YP_004063311.1 COG0049 Ribosomal protein S7 YP_004063312.1 COG0049 Ribosomal protein S7 YP_004063313.1 COG0048 Ribosomal protein S12 YP_004063314.1 COG0511 Biotin carboxyl carrier protein YP_004063315.1 COG0439 Biotin carboxylase YP_004063316.1 COG2360 Leu/Phe-tRNA-protein transferase YP_004063317.1 COG0466 ATP-dependent Lon protease, bacterial type YP_004063318.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_004063319.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_004063321.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004063322.1 COG2267 Lysophospholipase YP_004063323.1 COG0691 tmRNA-binding protein YP_004063324.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_004063325.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_004063326.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_004063327.1 COG0588 Phosphoglycerate mutase 1 YP_004063328.1 COG0289 Dihydrodipicolinate reductase YP_004063329.1 COG0837 Glucokinase YP_004063330.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_004063331.1 COG0583 Transcriptional regulator YP_004063332.1 COG0492 Thioredoxin reductase YP_004063334.1 COG0018 Arginyl-tRNA synthetase YP_004063335.1 COG0232 dGTP triphosphohydrolase YP_004063336.1 COG0316 Uncharacterized conserved protein YP_004063337.1 COG0708 Exonuclease III YP_004063338.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004063340.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004063342.1 COG0102 Ribosomal protein L13 YP_004063343.1 COG0103 Ribosomal protein S9 YP_004063344.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_004063345.1 COG0101 Pseudouridylate synthase YP_004063346.1 COG0223 Methionyl-tRNA formyltransferase YP_004063347.1 COG0242 N-formylmethionyl-tRNA deformylase YP_004063350.1 COG1559 Predicted periplasmic solute-binding protein YP_004063351.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004063352.1 COG0236 Acyl carrier protein YP_004063353.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004063354.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_004063355.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_004063356.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_004063357.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_004063358.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_004063359.1 COG4765 Uncharacterized protein conserved in bacteria YP_004063360.1 COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_004063361.1 COG1109 Phosphomannomutase YP_004063362.1 COG0465 ATP-dependent Zn proteases YP_004063363.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_004063364.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004063365.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004063367.1 COG0811 Biopolymer transport proteins YP_004063368.1 COG2255 Holliday junction resolvasome, helicase subunit YP_004063369.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_004063370.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_004063372.1 COG2094 3-methyladenine DNA glycosylase YP_004063397.1 COG1396 Predicted transcriptional regulators YP_004063399.1 COG1396 Predicted transcriptional regulators YP_004063402.1 COG3617 Prophage antirepressor YP_004063408.1 COG4271 Predicted nucleotide-binding protein containing TIR -like domain YP_004063409.1 COG0840 Methyl-accepting chemotaxis protein YP_004063411.1 COG3378 Predicted ATPase YP_004063422.1 COG3617 Prophage antirepressor YP_004063424.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_004063426.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004063427.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_004063428.1 COG0194 Guanylate kinase YP_004063431.1 COG0582 Integrase