-- dump date 20240506_063210 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP090569.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP090569.1.REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus EndoriftiaREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone.REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICAREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0xREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio SequelREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 14 of 22REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 14 of 22 Pseudo Genes (internal stop) :: 7 of 22REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 14 of 22 Pseudo Genes (internal stop) :: 7 of 22 Pseudo Genes (multiple problems) :: 4 of 22REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 14 of 22 Pseudo Genes (internal stop) :: 7 of 22 Pseudo Genes (multiple problems) :: 4 of 22 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 14 of 22 Pseudo Genes (internal stop) :: 7 of 22 Pseudo Genes (multiple problems) :: 4 of 22 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP090569.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Candidatus Endoriftia persephone. ##Genome-Assembly-Data-START## Assembly Method :: Flye v. 2.5 Assembly Name :: Flye2.5-Endoriftia_dominant_str_TICA Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 2000.0x Sequencing Technology :: PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_023733635.1-RS_2024_03_31 Annotation Date :: 03/31/2024 09:55:41 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,265 CDSs (total) :: 3,206 Genes (coding) :: 3,184 CDSs (with protein) :: 3,184 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 14 of 22 Pseudo Genes (internal stop) :: 7 of 22 Pseudo Genes (multiple problems) :: 4 of 22 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.