-- dump date 20140619_022433 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 511995000001 SEQ_END SEQ_END NC_011561.1 37111 37111 DR NC_011561.1; contig end 37111..37111 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 511995000002 SEQ_END SEQ_END NC_011562.1 31893 31893 DR NC_011562.1; contig end 31893..31893 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 511995000003 SEQ_END SEQ_END NC_011563.1 4149 4149 DR NC_011563.1; contig end 4149..4149 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 511995000004 SEQ_END SEQ_END NC_011564.1 37560 37560 DR NC_011564.1; contig end 37560..37560 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 511995000005 SEQ_END SEQ_END NC_011565.1 1114206 1114206 DR NC_011565.1; contig end 1114206..1114206 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 YP_002308581.1 CDS CFPG_P2-1 NC_011561.1 1 1599 D replication protein A 1..1599 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039679 YP_002308582.1 CDS CFPG_P2-2 NC_011561.1 1657 2055 D hypothetical protein 1657..2055 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039670 YP_002308583.1 CDS CFPG_P2-3 NC_011561.1 2045 3214 D hypothetical protein 2045..3214 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039672 YP_002308584.1 CDS CFPG_P2-4 NC_011561.1 3221 3976 D hypothetical protein 3221..3976 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039669 YP_002308585.1 CDS CFPG_P2-5 NC_011561.1 4051 4446 D hypothetical protein 4051..4446 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039676 YP_002308586.1 CDS CFPG_P2-6 NC_011561.1 4683 5645 R hypothetical protein complement(4683..5645) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039675 YP_002308587.1 CDS CFPG_P2-7 NC_011561.1 5664 7208 R hypothetical protein complement(5664..7208) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039677 YP_002308588.1 CDS CFPG_P2-8 NC_011561.1 7493 8050 D hypothetical protein 7493..8050 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039678 YP_002308589.1 CDS CFPG_P2-9 NC_011561.1 8098 10785 R hypothetical protein complement(8098..10785) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039686 YP_002308590.1 CDS CFPG_P2-10 NC_011561.1 11119 11895 R hypothetical protein complement(11119..11895) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039685 YP_002308591.1 CDS CFPG_P2-11 NC_011561.1 13479 14165 D hypothetical protein 13479..14165 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039683 YP_002308592.1 CDS CFPG_P2-12 NC_011561.1 14240 14590 D hypothetical protein 14240..14590 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039680 YP_002308593.1 CDS CFPG_P2-13 NC_011561.1 15255 15911 R hypothetical protein complement(15255..15911) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039684 YP_002308594.1 CDS CFPG_P2-14 NC_011561.1 16064 18391 R hypothetical protein complement(16064..18391) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039681 YP_002308595.1 CDS CFPG_P2-15 NC_011561.1 18439 18795 D hypothetical protein 18439..18795 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039694 YP_002308596.1 CDS CFPG_P2-16 NC_011561.1 20155 20601 R hypothetical protein complement(20155..20601) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039693 YP_002308597.1 CDS CFPG_P2-17 NC_011561.1 20623 21237 R putative N-acetylmuramoyl-L-alanine amidase complement(20623..21237) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039692 YP_002308598.1 CDS CFPG_P2-18 NC_011561.1 23395 23868 R hypothetical protein complement(23395..23868) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039695 YP_002308599.1 CDS CFPG_P2-19 NC_011561.1 24743 25198 R hypothetical protein complement(24743..25198) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039691 YP_002308600.1 CDS CFPG_P2-20 NC_011561.1 25768 26424 R hypothetical protein complement(25768..26424) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039690 YP_002308601.1 CDS CFPG_P2-21 NC_011561.1 26702 27052 D hypothetical protein 26702..27052 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039682 YP_002308602.1 CDS CFPG_P2-22 NC_011561.1 27218 27640 D hypothetical protein 27218..27640 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039688 YP_002308603.1 CDS CFPG_P2-23 NC_011561.1 27618 28805 D hypothetical protein 27618..28805 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039687 YP_002308604.1 CDS CFPG_P2-24 NC_011561.1 30304 30927 D serine site-specific recombinase 30304..30927 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039689 YP_002308605.1 CDS CFPG_P2-25 NC_011561.1 31036 31374 R hypothetical protein complement(31036..31374) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039668 YP_002308606.1 CDS CFPG_P2-26 NC_011561.1 31784 32413 R hypothetical protein complement(31784..32413) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039673 YP_002308607.1 CDS CFPG_P2-27 NC_011561.1 32576 32998 R hypothetical protein complement(32576..32998) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039671 YP_002308608.1 CDS CFPG_P2-28 NC_011561.1 35550 36536 D replication protein A 35550..36536 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039674 YP_002308609.1 CDS CFPG_P3-1 NC_011562.1 1 1593 D replication protein A 1..1593 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039714 YP_002308610.1 CDS CFPG_P3-2 NC_011562.1 2031 2567 D hypothetical protein 2031..2567 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039709 YP_002308611.1 CDS CFPG_P3-3 NC_011562.1 2811 3149 D hypothetical protein 2811..3149 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039717 YP_002308612.1 CDS CFPG_P3-4 NC_011562.1 3196 5298 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(3196..5298) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039713 YP_002308613.1 CDS CFPG_P3-5 NC_011562.1 5336 6268 R hypothetical protein complement(5336..6268) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039698 YP_002308614.1 CDS CFPG_P3-6 NC_011562.1 6441 6716 R hypothetical protein complement(6441..6716) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039701 YP_002308615.1 CDS CFPG_P3-7 NC_011562.1 6713 7468 R ParA family ATPase complement(6713..7468) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039700 YP_002308616.1 CDS CFPG_P3-8 NC_011562.1 7837 9228 R replicative DNA helicase DnaB complement(7837..9228) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039697 YP_002308617.1 CDS CFPG_P3-9 NC_011562.1 9243 10562 R replication protein A complement(9243..10562) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039702 YP_002308618.1 CDS CFPG_P3-10 NC_011562.1 12978 13805 D hypothetical protein 12978..13805 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039707 YP_002308619.1 CDS CFPG_P3-11 NC_011562.1 14941 15246 D hypothetical protein 14941..15246 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039715 YP_002308620.1 CDS CFPG_P3-12 NC_011562.1 16121 16873 D hypothetical protein 16121..16873 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039703 YP_002308621.1 CDS CFPG_P3-13 NC_011562.1 16937 17272 D hypothetical protein 16937..17272 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039712 YP_002308622.1 CDS CFPG_P3-14 NC_011562.1 17695 18609 R hypothetical protein complement(17695..18609) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039704 YP_002308623.1 CDS CFPG_P3-15 NC_011562.1 18974 20350 R hypothetical protein complement(18974..20350) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039720 YP_002308624.1 CDS CFPG_P3-16 NC_011562.1 20414 21259 R M23 family peptidase complement(20414..21259) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039710 YP_002308625.1 CDS CFPG_P3-17 NC_011562.1 21854 22267 R hypothetical protein complement(21854..22267) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039719 YP_002308626.1 CDS CFPG_P3-18 NC_011562.1 22588 23202 R putative N-acetylmuramoyl-L-alanine amidase complement(22588..23202) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039711 YP_002308627.1 CDS CFPG_P3-19 NC_011562.1 23725 24048 R hypothetical protein complement(23725..24048) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039718 YP_002308628.1 CDS CFPG_P3-20 NC_011562.1 25204 25662 R hypothetical protein complement(25204..25662) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039716 YP_002308629.1 CDS CFPG_P3-21 NC_011562.1 26729 27352 D serine site-specific recombinase 26729..27352 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039705 YP_002308630.1 CDS CFPG_P3-22 NC_011562.1 27461 27775 R hypothetical protein complement(27461..27775) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039708 YP_002308631.1 CDS CFPG_P3-23 NC_011562.1 28113 29051 R hypothetical protein complement(28113..29051) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039696 YP_002308632.1 CDS CFPG_P3-24 NC_011562.1 29076 29354 R putative plasmid-encoded toxin Txe/YoeB complement(29076..29354) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039706 YP_002308633.1 CDS CFPG_P3-25 NC_011562.1 29656 30075 R hypothetical protein complement(29656..30075) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039699 YP_002308634.1 CDS CFPG_P4-1 NC_011563.1 1 1122 D replication protein A 1..1122 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039724 YP_002308635.1 CDS CFPG_P4-2 NC_011563.1 1152 1565 R hypothetical protein complement(1152..1565) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039721 YP_002308636.1 CDS CFPG_P4-3 NC_011563.1 1763 3040 D mobilization protein MobA 1763..3040 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039722 YP_002308637.1 CDS CFPG_P4-4 NC_011563.1 3623 3931 D hypothetical protein 3623..3931 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039723 YP_002308638.1 CDS CFPG_P1-1 NC_011564.1 1 1599 D replication protein A 1..1599 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039760 YP_002308639.1 CDS CFPG_P1-2 NC_011564.1 1657 2058 D hypothetical protein 1657..2058 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039741 YP_002308640.1 CDS CFPG_P1-3 NC_011564.1 2048 3118 D hypothetical protein 2048..3118 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039727 YP_002308641.1 CDS CFPG_P1-4 NC_011564.1 3125 3925 D hypothetical protein 3125..3925 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039753 YP_002308642.1 CDS CFPG_P1-5 NC_011564.1 4643 4951 D hypothetical protein 4643..4951 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039747 YP_002308643.1 CDS CFPG_P1-6 NC_011564.1 5002 5304 D hypothetical protein 5002..5304 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039748 YP_002308644.1 CDS CFPG_P1-7 NC_011564.1 5673 7268 D replication protein A 5673..7268 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039751 YP_002308645.1 CDS CFPG_P1-8 NC_011564.1 7394 8614 D DNA modification methylase 7394..8614 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039750 YP_002308646.1 CDS CFPG_P1-9 NC_011564.1 9342 9710 D hypothetical protein 9342..9710 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039728 YP_002308647.1 CDS CFPG_P1-10 NC_011564.1 9960 10352 R hypothetical protein complement(9960..10352) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039731 YP_002308648.1 CDS CFPG_P1-11 NC_011564.1 10379 10666 R hypothetical protein complement(10379..10666) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039742 YP_002308649.1 CDS CFPG_P1-12 NC_011564.1 10669 11082 R hypothetical protein complement(10669..11082) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039739 YP_002308650.1 CDS CFPG_P1-13 NC_011564.1 11274 12104 D hypothetical protein 11274..12104 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039736 YP_002308651.1 CDS CFPG_P1-14 NC_011564.1 12270 12569 D hypothetical protein 12270..12569 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039730 YP_002308652.1 CDS CFPG_P1-15 NC_011564.1 12582 12923 D hypothetical protein 12582..12923 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039735 YP_002308653.1 CDS CFPG_P1-16 NC_011564.1 13949 14116 R hypothetical protein complement(13949..14116) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039761 YP_002308654.1 CDS CFPG_P1-17 NC_011564.1 16581 17210 R hypothetical protein complement(16581..17210) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039734 YP_002308655.1 CDS CFPG_P1-18 NC_011564.1 17365 19698 R hypothetical protein complement(17365..19698) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039737 YP_002308656.1 CDS CFPG_P1-19 NC_011564.1 19748 20104 D hypothetical protein 19748..20104 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039733 YP_002308657.1 CDS CFPG_P1-20 NC_011564.1 20589 20900 R hypothetical protein complement(20589..20900) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039726 YP_002308658.1 CDS CFPG_P1-21 NC_011564.1 21481 21882 R hypothetical protein complement(21481..21882) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039745 YP_002308659.1 CDS CFPG_P1-22 NC_011564.1 23107 23445 R hypothetical protein complement(23107..23445) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039732 YP_002308660.1 CDS CFPG_P1-23 NC_011564.1 23577 24020 R hypothetical protein complement(23577..24020) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039729 YP_002308661.1 CDS CFPG_P1-24 NC_011564.1 24039 24464 R hypothetical protein complement(24039..24464) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039746 YP_002308662.1 CDS CFPG_P1-25 NC_011564.1 24461 24919 R hypothetical protein complement(24461..24919) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039738 YP_002308663.1 CDS CFPG_P1-26 NC_011564.1 25251 25661 R hypothetical protein complement(25251..25661) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039744 YP_002308664.1 CDS CFPG_P1-27 NC_011564.1 25780 26124 R hypothetical protein complement(25780..26124) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039740 YP_002308665.1 CDS CFPG_P1-28 NC_011564.1 26131 26592 R hypothetical protein complement(26131..26592) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039743 YP_002308666.1 CDS CFPG_P1-29 NC_011564.1 27320 27655 D hypothetical protein 27320..27655 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039725 YP_002308667.1 CDS CFPG_P1-30 NC_011564.1 27818 28231 D hypothetical protein 27818..28231 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039755 YP_002308668.1 CDS CFPG_P1-31 NC_011564.1 28218 29405 D hypothetical protein 28218..29405 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039756 YP_002308669.1 CDS CFPG_P1-32 NC_011564.1 30849 31472 D serine site-specific recombinase 30849..31472 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039754 YP_002308670.1 CDS CFPG_P1-33 NC_011564.1 31537 31884 R hypothetical protein complement(31537..31884) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039749 YP_002308671.1 CDS CFPG_P1-34 NC_011564.1 32188 32742 R hypothetical protein complement(32188..32742) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039759 YP_002308672.1 CDS CFPG_P1-35 NC_011564.1 33518 33940 R hypothetical protein complement(33518..33940) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039757 YP_002308673.1 CDS CFPG_P1-36 NC_011564.1 35417 35755 R hypothetical protein complement(35417..35755) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039752 YP_002308674.1 CDS CFPG_P1-37 NC_011564.1 36109 37053 D replication protein A 36109..37053 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039758 YP_002308675.1 CDS CFPG_001 NC_011565.1 1 1368 D chromosomal replication initiation protein DnaA 1..1368 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039825 YP_002308676.1 CDS argS NC_011565.1 1711 3489 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1711..3489 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039979 YP_002308677.1 CDS CFPG_003 NC_011565.1 3518 5269 R transcription termination factor Rho complement(3518..5269) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039896 YP_002308678.1 CDS CFPG_004 NC_011565.1 5397 6740 R tRNA(Ile)-lysidine synthase complement(5397..6740) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039912 YP_002308679.1 CDS CFPG_005 NC_011565.1 6770 10987 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(6770..10987) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039832 YP_002308680.1 CDS rpoB NC_011565.1 11073 14879 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(11073..14879) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039794 YP_002308681.1 CDS CFPG_007 NC_011565.1 15061 15435 R 50S ribosomal protein L7/L12 complement(15061..15435) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039849 YP_002308682.1 CDS CFPG_008 NC_011565.1 15477 16022 R 50S ribosomal protein L10 complement(15477..16022) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039968 YP_002308683.1 CDS rplA NC_011565.1 16034 16732 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(16034..16732) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039919 YP_002308684.1 CDS rplK NC_011565.1 16743 17195 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(16743..17195) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039807 YP_002308685.1 CDS CFPG_011 NC_011565.1 17441 17974 R transcription antitermination protein NusG complement(17441..17974) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039876 YP_002308686.1 CDS CFPG_012 NC_011565.1 18099 18320 R preprotein translocase subunit SecE complement(18099..18320) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039987 YP_002308687.1 CDS CFPG_013 NC_011565.1 18521 19708 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(18521..19708) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039455 YP_002308688.1 CDS CFPG_014 NC_011565.1 20755 22107 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(20755..22107) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039412 YP_002308689.1 CDS CFPG_015 NC_011565.1 22107 22856 R dolichol-phosphate mannosyltransferase complement(22107..22856) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039934 YP_002308690.1 CDS CFPG_016 NC_011565.1 22853 23974 R iron ABC transporter substrate-binding protein complement(22853..23974) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039858 YP_002308691.1 CDS rpsF NC_011565.1 24641 24979 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 24641..24979 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039867 YP_002308692.1 CDS rpsR NC_011565.1 24994 25272 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 24994..25272 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039874 YP_002308693.1 CDS rplI NC_011565.1 25294 25737 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 25294..25737 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039928 YP_002308694.1 CDS CFPG_020 NC_011565.1 26067 27473 R anthranilate synthase component I complement(26067..27473) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039972 YP_002308695.1 CDS rpmE2 NC_011565.1 27804 28055 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(27804..28055) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039854 YP_002308696.1 CDS CFPG_022 NC_011565.1 28197 28736 D hypothetical protein 28197..28736 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039840 YP_002308697.1 CDS CFPG_023 NC_011565.1 28840 29577 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(28840..29577) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039982 YP_002308698.1 CDS CFPG_024 NC_011565.1 29694 30947 D hypothetical protein 29694..30947 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039923 YP_002308699.1 CDS CFPG_025 NC_011565.1 31009 31941 D riboflavin kinase/FMN adenylyltransferase 31009..31941 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039837 YP_002308700.1 CDS CFPG_026 NC_011565.1 32259 34193 R DNA gyrase subunit B complement(32259..34193) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039814 YP_002308701.1 CDS CFPG_027 NC_011565.1 34457 34624 D ferredoxin 34457..34624 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039996 YP_002308702.1 CDS CFPG_028 NC_011565.1 35571 37088 D hypothetical protein 35571..37088 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039920 YP_002308703.1 CDS CFPG_029 NC_011565.1 37065 37955 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(37065..37955) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039785 YP_002308704.1 CDS hisG NC_011565.1 39863 40714 D long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 39863..40714 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039915 YP_002308705.1 CDS hisD NC_011565.1 40727 42016 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 40727..42016 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039821 YP_002308706.1 CDS CFPG_032 NC_011565.1 42075 43133 D histidinol-phosphate aminotransferase 42075..43133 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039812 YP_002308707.1 CDS CFPG_033 NC_011565.1 43105 44208 D catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 43105..44208 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039845 YP_002308708.1 CDS CFPG_034 NC_011565.1 44287 44559 D hypothetical protein 44287..44559 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039387 YP_002308709.1 CDS CFPG_035 NC_011565.1 44568 44864 D hypothetical protein 44568..44864 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039811 YP_002308710.1 CDS CFPG_036 NC_011565.1 44971 46515 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 44971..46515 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039839 YP_002308711.1 CDS hisH NC_011565.1 46569 47159 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 46569..47159 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039853 YP_002308712.1 CDS CFPG_038 NC_011565.1 47203 47925 D phosphoribosylformimino-5-aminoimidazole carboxamide ribotide 47203..47925 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039930 YP_002308713.1 CDS CFPG_039 NC_011565.1 47915 48673 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 47915..48673 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039892 YP_002308714.1 CDS trmD NC_011565.1 49843 50511 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 49843..50511 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039863 YP_002308715.1 CDS CFPG_041 NC_011565.1 50805 51995 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 50805..51995 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039950 YP_002308716.1 CDS CFPG_042 NC_011565.1 52037 53110 D recombinase A 52037..53110 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039965 YP_002308717.1 CDS CFPG_043 NC_011565.1 53110 55269 D hypothetical protein 53110..55269 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039873 YP_002308718.1 CDS CFPG_044 NC_011565.1 55479 56237 R hypothetical protein complement(55479..56237) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039977 YP_002308719.1 CDS CFPG_045 NC_011565.1 56318 57412 R hypothetical protein complement(56318..57412) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039877 YP_002308720.1 CDS CFPG_046 NC_011565.1 57399 58052 R endonuclease III complement(57399..58052) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039997 YP_002308721.1 CDS pheS NC_011565.1 58066 59085 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(58066..59085) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039980 YP_002308722.1 CDS CFPG_048 NC_011565.1 59114 60760 R ATP-dependent RNA helicase complement(59114..60760) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039824 YP_002308723.1 CDS CFPG_049 NC_011565.1 60833 61462 R hypothetical protein complement(60833..61462) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039852 YP_002308724.1 CDS CFPG_050 NC_011565.1 64948 65673 D DNA repair protein RecO 64948..65673 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039940 YP_002308725.1 CDS CFPG_051 NC_011565.1 65806 67746 R hypothetical protein complement(65806..67746) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039822 YP_002308726.1 CDS nusA NC_011565.1 68167 69420 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 68167..69420 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039820 YP_002308727.1 CDS infB NC_011565.1 69427 72165 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 69427..72165 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039953 YP_002308728.1 CDS CFPG_054 NC_011565.1 72194 73561 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 72194..73561 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039913 YP_002308729.1 CDS CFPG_055 NC_011565.1 73569 74885 R hypothetical protein complement(73569..74885) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039553 YP_002308730.1 CDS CFPG_056 NC_011565.1 75293 75646 D dihydroneopterin aldolase 75293..75646 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039552 YP_002308731.1 CDS CFPG_057 NC_011565.1 76296 77738 R NADH dehydrogenase I subunit N complement(76296..77738) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039548 YP_002308732.1 CDS CFPG_058 NC_011565.1 77772 79247 R NADH dehydrogenase I subunit M complement(77772..79247) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039511 YP_002308733.1 CDS CFPG_059 NC_011565.1 79640 80005 R hypothetical protein complement(79640..80005) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039480 YP_002308734.1 CDS CFPG_060 NC_011565.1 81063 82976 R NADH dehydrogenase I subunit L complement(81063..82976) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039537 YP_002308735.1 CDS CFPG_061 NC_011565.1 83242 83595 R hypothetical protein complement(83242..83595) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039535 YP_002308736.1 CDS CFPG_062 NC_011565.1 84041 85327 R glucose/galactose transporter complement(84041..85327) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039497 YP_002308737.1 CDS CFPG_063 NC_011565.1 85412 85741 R preprotein translocase subunit SecG complement(85412..85741) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039528 YP_002308738.1 CDS CFPG_064 NC_011565.1 86228 87520 R UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl- D-alanine ligase complement(86228..87520) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039495 YP_002308739.1 CDS CFPG_065 NC_011565.1 87677 88498 D dihydropteroate synthase 87677..88498 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039523 YP_002308740.1 CDS CFPG_066 NC_011565.1 88491 89255 D hypothetical protein 88491..89255 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039491 YP_002308741.1 CDS CFPG_067 NC_011565.1 89294 91588 R penicillin-binding protein 1A complement(89294..91588) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039569 YP_002308742.1 CDS CFPG_068 NC_011565.1 91754 92266 R 50S ribosomal protein L17 complement(91754..92266) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039620 YP_002308743.1 CDS CFPG_069 NC_011565.1 92269 93255 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(92269..93255) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039619 YP_002308744.1 CDS CFPG_070 NC_011565.1 93267 93860 R 30S ribosomal protein S4 complement(93267..93860) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039593 YP_002308745.1 CDS CFPG_071 NC_011565.1 93881 94270 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(93881..94270) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039584 YP_002308746.1 CDS rpsM NC_011565.1 94298 94678 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(94298..94678) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039529 YP_002308747.1 CDS infA NC_011565.1 94838 95056 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(94838..95056) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039596 YP_002308748.1 CDS CFPG_074 NC_011565.1 95096 95872 R methionyl aminopeptidase complement(95096..95872) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039566 YP_002308749.1 CDS secY NC_011565.1 95917 97263 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(95917..97263) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039591 YP_002308750.1 CDS rplO NC_011565.1 97260 97715 R late assembly protein; 50S ribosomal protein L15 complement(97260..97715) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039587 YP_002308751.1 CDS rpsE NC_011565.1 97931 98443 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(97931..98443) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039585 YP_002308752.1 CDS CFPG_078 NC_011565.1 98461 98805 R 50S ribosomal protein L18 complement(98461..98805) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039659 YP_002308753.1 CDS CFPG_079 NC_011565.1 98828 99382 R 50S ribosomal protein L6 complement(98828..99382) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039658 YP_002308754.1 CDS rpsH NC_011565.1 99393 99788 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(99393..99788) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039574 YP_002308755.1 CDS CFPG_081 NC_011565.1 99916 100185 R 30S ribosomal protein S14 complement(99916..100185) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039628 YP_002308756.1 CDS rplE NC_011565.1 100199 100759 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(100199..100759) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039623 YP_002308757.1 CDS rplX NC_011565.1 100759 101079 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(100759..101079) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039649 YP_002308758.1 CDS rplN NC_011565.1 101109 101474 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(101109..101474) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039621 YP_002308759.1 CDS rpsQ NC_011565.1 101477 101734 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(101477..101734) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039588 YP_002308760.1 CDS CFPG_086 NC_011565.1 101724 101933 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(101724..101933) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039637 YP_002308761.1 CDS rplP NC_011565.1 102354 102785 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(102354..102785) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039633 YP_002308762.1 CDS rpsC NC_011565.1 102861 103598 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(102861..103598) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039632 YP_002308763.1 CDS rplV NC_011565.1 103607 104011 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(103607..104011) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039606 YP_002308764.1 CDS rpsS NC_011565.1 104020 104289 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(104020..104289) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039605 YP_002308765.1 CDS rplB NC_011565.1 104317 105141 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(104317..105141) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039629 YP_002308766.1 CDS CFPG_092 NC_011565.1 105145 105444 R 50S ribosomal protein L23 complement(105145..105444) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039250 YP_002308767.1 CDS rplD NC_011565.1 105463 106089 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(105463..106089) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039634 YP_002308768.1 CDS CFPG_094 NC_011565.1 106089 106703 R 50S ribosomal protein L3 complement(106089..106703) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039664 YP_002308769.1 CDS CFPG_095 NC_011565.1 106828 107139 R 30S ribosomal protein S10 complement(106828..107139) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040002 YP_002308770.1 CDS CFPG_096 NC_011565.1 107589 109718 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(107589..109718) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039916 YP_002308771.1 CDS CFPG_097 NC_011565.1 109753 110229 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(109753..110229) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039214 YP_002308772.1 CDS rpsL NC_011565.1 110313 110729 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(110313..110729) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039614 YP_002308773.1 CDS CFPG_099 NC_011565.1 111357 112226 R member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z complement(111357..112226) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039763 YP_002308774.1 CDS CFPG_100 NC_011565.1 112579 114252 R methionyl-tRNA synthetase complement(112579..114252) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039180 YP_002308775.1 CDS CFPG_101 NC_011565.1 114720 116201 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 114720..116201 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039777 YP_002308776.1 CDS rplT NC_011565.1 119843 120190 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(119843..120190) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039772 YP_002308777.1 CDS infC NC_011565.1 120560 121111 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(120560..121111) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039269 YP_002308778.1 CDS thrS NC_011565.1 121157 123103 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(121157..123103) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039217 YP_002308779.1 CDS CFPG_105 NC_011565.1 123351 125048 R carboxyl-terminal processing protease complement(123351..125048) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039220 YP_002308780.1 CDS coaD NC_011565.1 125073 125516 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(125073..125516) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039225 YP_002308781.1 CDS CFPG_107 NC_011565.1 125526 126491 R 3-hydroxybutyryl-CoA dehydrogenase complement(125526..126491) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039149 YP_002308782.1 CDS CFPG_108 NC_011565.1 126538 127539 R phosphate acetyltransferase complement(126538..127539) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039247 YP_002308783.1 CDS CFPG_109 NC_011565.1 127615 128376 R exodeoxyribonuclease III complement(127615..128376) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039765 YP_002308784.1 CDS CFPG_110 NC_011565.1 128379 130271 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(128379..130271) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039779 YP_002308785.1 CDS ispD NC_011565.1 130421 131089 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 130421..131089 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039291 YP_002308786.1 CDS CFPG_112 NC_011565.1 131108 133231 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 131108..133231 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039374 YP_002308787.1 CDS rpmH NC_011565.1 133361 133513 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 133361..133513 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039303 YP_002308788.1 CDS CFPG_114 NC_011565.1 133617 134216 D hypothetical protein 133617..134216 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039292 YP_002308789.1 CDS CFPG_115 NC_011565.1 134250 135278 D ribosomal large subunit pseudouridine synthase D 134250..135278 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039313 YP_002308790.1 CDS ddl NC_011565.1 135275 136249 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 135275..136249 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039288 YP_002308791.1 CDS CFPG_117 NC_011565.1 136267 137421 D hypothetical protein 136267..137421 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039383 YP_002308792.1 CDS CFPG_118 NC_011565.1 137418 139343 D glutamine-dependent amidohydrolase 137418..139343 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039427 YP_002308793.1 CDS CFPG_119 NC_011565.1 139381 140280 R M23 family peptidase complement(139381..140280) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039381 YP_002308794.1 CDS ndk NC_011565.1 140306 140773 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(140306..140773) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039615 YP_002308795.1 CDS CFPG_121 NC_011565.1 140915 141937 R tRNA-dihydrouridine synthase complement(140915..141937) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039451 YP_002308796.1 CDS CFPG_122 NC_011565.1 141924 143075 R alanine racemase complement(141924..143075) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039434 YP_002308797.1 CDS CFPG_123 NC_011565.1 143424 144383 R signal recognition particle receptor FtsY complement(143424..144383) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039435 YP_002308798.1 CDS CFPG_124 NC_011565.1 144522 144674 R hypothetical protein complement(144522..144674) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039464 YP_002308799.1 CDS rpmG NC_011565.1 144687 144875 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(144687..144875) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039465 YP_002308800.1 CDS rpmB NC_011565.1 144878 145120 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(144878..145120) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039493 YP_002308801.1 CDS ispH NC_011565.1 145511 146374 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(145511..146374) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039506 YP_002308802.1 CDS engA NC_011565.1 146522 147835 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 146522..147835 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039447 YP_002308803.1 CDS CFPG_129 NC_011565.1 148238 148834 D ribonuclease H 148238..148834 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039555 YP_002308804.1 CDS CFPG_130 NC_011565.1 149355 151349 D primosomal protein N' 149355..151349 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039557 YP_002308805.1 CDS CFPG_131 NC_011565.1 151685 152245 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(151685..152245) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039342 YP_002308806.1 CDS CFPG_132 NC_011565.1 152250 152819 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(152250..152819) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039578 YP_002308807.1 CDS CFPG_133 NC_011565.1 153391 153624 R F-type ATP synthase epsilon subunit complement(153391..153624) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039604 YP_002308808.1 CDS CFPG_134 NC_011565.1 153631 155133 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(153631..155133) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039643 YP_002308809.1 CDS CFPG_135 NC_011565.1 155296 156099 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 155296..156099 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039482 YP_002308810.1 CDS CFPG_136 NC_011565.1 156591 157007 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(156591..157007) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039798 YP_002308811.1 CDS CFPG_137 NC_011565.1 157087 157542 R transcriptional regulator AsnC complement(157087..157542) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039472 YP_002308812.1 CDS CFPG_138 NC_011565.1 157529 158518 R peptidyl-prolyl isomerase complement(157529..158518) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039806 YP_002308813.1 CDS CFPG_139 NC_011565.1 159082 161562 R ferrous iron transport protein B complement(159082..161562) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039810 YP_002308814.1 CDS ruvC NC_011565.1 162033 162605 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(162033..162605) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039813 YP_002308815.1 CDS CFPG_141 NC_011565.1 162789 164204 R RNA polymerase sigma-54 factor complement(162789..164204) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039586 YP_002308816.1 CDS CFPG_142 NC_011565.1 164317 166026 D ATP-dependent DNA helicase RecQ 164317..166026 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039999 YP_002308817.1 CDS CFPG_143 NC_011565.1 167218 168162 R homoserine O-succinyltransferase complement(167218..168162) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039998 YP_002308818.1 CDS CFPG_144 NC_011565.1 168373 170241 R molecular chaperone; heat shock protein 90 complement(168373..170241) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039958 YP_002308819.1 CDS CFPG_145 NC_011565.1 170255 172471 R ATP-dependent Clp protease ATP-binding subunit complement(170255..172471) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039944 YP_002308820.1 CDS CFPG_146 NC_011565.1 172614 173456 D hypothetical protein 172614..173456 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039952 YP_002308821.1 CDS CFPG_147 NC_011565.1 173473 173949 D hypothetical protein 173473..173949 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039926 YP_002308822.1 CDS CFPG_148 NC_011565.1 174942 175985 D Fe3+-siderophore ABC transporter permease component 174942..175985 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039893 YP_002308823.1 CDS CFPG_149 NC_011565.1 177336 180266 D part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 177336..180266 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039978 YP_002308824.1 CDS CFPG_150 NC_011565.1 180298 180984 R thiamine pyrophosphokinase complement(180298..180984) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039868 YP_002308825.1 CDS CFPG_151 NC_011565.1 180984 181601 R nicotinamide mononucleotide transporter complement(180984..181601) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039888 YP_002308826.1 CDS CFPG_152 NC_011565.1 181859 182269 D hypothetical protein 181859..182269 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039819 YP_002308827.1 CDS truA NC_011565.1 183248 183997 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 183248..183997 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039994 YP_002308828.1 CDS CFPG_154 NC_011565.1 184006 184623 D hypothetical protein 184006..184623 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039975 YP_002308829.1 CDS CFPG_155 NC_011565.1 187450 187776 R aspartate 1-decarboxylase complement(187450..187776) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039973 YP_002308830.1 CDS CFPG_156 NC_011565.1 187835 190207 R ATP-dependent Lon protease complement(187835..190207) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039964 YP_002308831.1 CDS CFPG_157 NC_011565.1 190406 191953 D Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 190406..191953 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040000 YP_002308832.1 CDS CFPG_158 NC_011565.1 193399 194592 D AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 193399..194592 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039638 YP_002308833.1 CDS CFPG_159 NC_011565.1 194613 195146 D nitroreductase family protein 194613..195146 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039960 YP_002308834.1 CDS fmt NC_011565.1 195171 196145 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(195171..196145) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039970 YP_002308835.1 CDS CFPG_161 NC_011565.1 200111 201337 R sigma-54-dependent transcriptional regulator complement(200111..201337) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039601 YP_002308836.1 CDS CFPG_162 NC_011565.1 201459 201872 R hypothetical protein complement(201459..201872) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039947 YP_002308837.1 CDS CFPG_163 NC_011565.1 201912 202496 R dephospho-CoA kinase complement(201912..202496) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039942 YP_002308838.1 CDS CFPG_164 NC_011565.1 203423 203761 R preprotein translocase subunit YajC complement(203423..203761) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039909 YP_002308839.1 CDS gltX NC_011565.1 203853 205337 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 203853..205337 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039900 YP_002308840.1 CDS CFPG_166 NC_011565.1 205867 206418 D rubrerythrin 205867..206418 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039895 YP_002308841.1 CDS pyrG NC_011565.1 207512 209125 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 207512..209125 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039908 YP_002308842.1 CDS CFPG_168 NC_011565.1 209254 211092 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 209254..211092 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039891 YP_002308843.1 CDS CFPG_169 NC_011565.1 211649 212485 D hydrogenase gamma subunit 211649..212485 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039871 YP_002308844.1 CDS CFPG_170 NC_011565.1 212510 213490 D 4-hydroxythreonine-4-phosphate dehydrogenase 212510..213490 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039866 YP_002308845.1 CDS CFPG_171 NC_011565.1 213538 214710 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(213538..214710) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039848 YP_002308846.1 CDS CFPG_172 NC_011565.1 215286 216077 D molybdate ABC transporter substrate-binding protein 215286..216077 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039823 YP_002308847.1 CDS CFPG_173 NC_011565.1 221032 221820 R prephenate dehydrogenase complement(221032..221820) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039144 YP_002308848.1 CDS CFPG_174 NC_011565.1 221842 222909 R bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase complement(221842..222909) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040018 YP_002308849.1 CDS CFPG_175 NC_011565.1 222914 224089 R aspartate aminotransferase complement(222914..224089) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039666 YP_002308850.1 CDS CFPG_176 NC_011565.1 224100 224951 R prephenate dehydratase complement(224100..224951) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039846 YP_002308851.1 CDS CFPG_177 NC_011565.1 225509 226222 R hypothetical protein complement(225509..226222) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039917 YP_002308852.1 CDS CFPG_178 NC_011565.1 228005 228997 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(228005..228997) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039879 YP_002308853.1 CDS CFPG_179 NC_011565.1 230818 233139 R DNA topoisomerase I complement(230818..233139) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039857 YP_002308854.1 CDS CFPG_180 NC_011565.1 233319 233741 R molecular chaperone IbpA complement(233319..233741) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039842 YP_002308855.1 CDS CFPG_181 NC_011565.1 235733 236980 R M23 family peptidase complement(235733..236980) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039817 YP_002308856.1 CDS CFPG_182 NC_011565.1 236977 237819 R hypothetical protein complement(236977..237819) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039642 YP_002308857.1 CDS CFPG_183 NC_011565.1 237803 239545 R hypothetical protein complement(237803..239545) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039962 YP_002308858.1 CDS CFPG_184 NC_011565.1 239567 239998 R dUTP pyrophosphatase complement(239567..239998) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039957 YP_002308859.1 CDS rnpA NC_011565.1 240321 240716 D protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 240321..240716 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039954 YP_002308860.1 CDS CFPG_186 NC_011565.1 240713 240946 D hypothetical protein 240713..240946 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039956 YP_002308861.1 CDS CFPG_187 NC_011565.1 241487 242869 D magnesium transporter 241487..242869 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039951 YP_002308862.1 CDS CFPG_188 NC_011565.1 242932 243690 R uroporphyrinogen-III synthase complement(242932..243690) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039937 YP_002308863.1 CDS CFPG_189 NC_011565.1 243703 244383 R hypothetical protein complement(243703..244383) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039935 YP_002308864.1 CDS CFPG_190 NC_011565.1 244954 248163 R hypothetical protein complement(244954..248163) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039922 YP_002308865.1 CDS CFPG_191 NC_011565.1 248367 249440 D aldose 1-epimerase 248367..249440 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039914 YP_002308866.1 CDS CFPG_192 NC_011565.1 252328 253716 R phosphoglucomutase/phosphomannomutase complement(252328..253716) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039910 YP_002308867.1 CDS CFPG_193 NC_011565.1 253874 254908 R hypothetical protein complement(253874..254908) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039890 YP_002308868.1 CDS CFPG_194 NC_011565.1 256088 256738 R ribulose-phosphate 3-epimerase complement(256088..256738) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039887 YP_002308869.1 CDS CFPG_195 NC_011565.1 256891 257676 R ribonuclease III complement(256891..257676) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039881 YP_002308870.1 CDS CFPG_196 NC_011565.1 257669 258940 R 3-oxoacyl-ACP synthase complement(257669..258940) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039883 YP_002308871.1 CDS CFPG_197 NC_011565.1 260109 261107 R catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta complement(260109..261107) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039770 YP_002308872.1 CDS CFPG_198 NC_011565.1 261209 263041 R 2-oxoglutarate ferredoxin oxidoreductase alpha/gamma subunit complement(261209..263041) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039769 YP_002308873.1 CDS CFPG_199 NC_011565.1 263069 263581 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(263069..263581) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039869 YP_002308874.1 CDS CFPG_200 NC_011565.1 263808 264623 D Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 263808..264623 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039870 YP_002308875.1 CDS CFPG_201 NC_011565.1 265307 265825 R hypothetical protein complement(265307..265825) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039618 YP_002308876.1 CDS CFPG_202 NC_011565.1 266585 267235 R hypothetical protein complement(266585..267235) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039860 YP_002308877.1 CDS CFPG_203 NC_011565.1 267243 269003 R ribonuclease R complement(267243..269003) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039859 YP_002308878.1 CDS CFPG_204 NC_011565.1 270339 271865 D serine protease DegQ 270339..271865 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039430 YP_002308879.1 CDS CFPG_205 NC_011565.1 271909 272769 D RNA polymerase primary sigma factor 271909..272769 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039850 YP_002308880.1 CDS hppA NC_011565.1 273244 275637 R pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase complement(273244..275637) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039844 YP_002308881.1 CDS CFPG_207 NC_011565.1 279903 280445 R hypothetical protein complement(279903..280445) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039834 YP_002308882.1 CDS CFPG_208 NC_011565.1 281206 281541 R hypothetical protein complement(281206..281541) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039791 YP_002308883.1 CDS CFPG_209 NC_011565.1 285326 285769 D hypothetical protein 285326..285769 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039831 YP_002308884.1 CDS CFPG_210 NC_011565.1 292238 292582 D hypothetical protein 292238..292582 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039829 YP_002308885.1 CDS CFPG_211 NC_011565.1 293189 293725 D hypothetical protein 293189..293725 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039830 YP_002308886.1 CDS CFPG_212 NC_011565.1 294669 296522 D amidophosphoribosyltransferase 294669..296522 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039828 YP_002308887.1 CDS CFPG_213 NC_011565.1 296551 298191 R alpha-amylase complement(296551..298191) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039826 YP_002308888.1 CDS CFPG_214 NC_011565.1 298986 299717 D cell division protein FtsQ 298986..299717 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039989 YP_002308889.1 CDS CFPG_215 NC_011565.1 299702 300892 D cell division protein FtsA 299702..300892 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039976 YP_002308890.1 CDS CFPG_216 NC_011565.1 300926 302170 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 300926..302170 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039974 YP_002308891.1 CDS CFPG_217 NC_011565.1 302167 302931 R undecaprenyl pyrophosphate synthetase complement(302167..302931) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039886 YP_002308892.1 CDS CFPG_218 NC_011565.1 303180 304091 D protein methyltransferase HemK 303180..304091 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039885 YP_002308893.1 CDS CFPG_219 NC_011565.1 304333 305115 D hypothetical protein 304333..305115 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039882 YP_002308894.1 CDS pgk NC_011565.1 305352 306614 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(305352..306614) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039875 YP_002308895.1 CDS CFPG_221 NC_011565.1 306944 308023 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(306944..308023) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039838 YP_002308896.1 CDS CFPG_222 NC_011565.1 308198 308500 R hypothetical protein complement(308198..308500) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039835 YP_002308897.1 CDS ppnK NC_011565.1 311574 312452 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(311574..312452) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039622 YP_002308898.1 CDS CFPG_224 NC_011565.1 312833 313393 D hypothetical protein 312833..313393 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039663 YP_002308899.1 CDS CFPG_225 NC_011565.1 314296 317625 D transcription-repair coupling factor 314296..317625 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039521 YP_002308900.1 CDS CFPG_226 NC_011565.1 317628 318926 D folylpolyglutamate synthase 317628..318926 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039519 YP_002308901.1 CDS ureC NC_011565.1 318930 320636 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(318930..320636) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039306 YP_002308902.1 CDS CFPG_228 NC_011565.1 320650 321402 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; bifunctional urease subunit gamma/beta complement(320650..321402) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039788 YP_002308903.1 CDS CFPG_229 NC_011565.1 321407 322111 R urea/branched-chain amino acid ABC transporter ATP-binding protein complement(321407..322111) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039150 YP_002308904.1 CDS CFPG_230 NC_011565.1 322120 322881 R urea/branched-chain amino acid ABC transporter ATP-binding protein complement(322120..322881) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040004 YP_002308905.1 CDS CFPG_231 NC_011565.1 322891 323946 R urea/branched-chain amino acid ABC transporter permease complement(322891..323946) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040021 YP_002308906.1 CDS CFPG_232 NC_011565.1 323956 324861 R urea/branched-chain amino acid ABC transporter permease complement(323956..324861) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039656 YP_002308907.1 CDS CFPG_233 NC_011565.1 324955 326235 R urea/branched-chain amino acid ABC transporter substrate-binding protein complement(324955..326235) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039655 YP_002308908.1 CDS CFPG_234 NC_011565.1 327831 328823 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 327831..328823 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039648 YP_002308909.1 CDS CFPG_235 NC_011565.1 328906 330315 D catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 328906..330315 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039641 YP_002308910.1 CDS CFPG_236 NC_011565.1 330377 331036 D pit accessory protein 330377..331036 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039636 YP_002308911.1 CDS CFPG_237 NC_011565.1 331107 332111 D inorganic phosphate transporter 331107..332111 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039630 YP_002308912.1 CDS CFPG_238 NC_011565.1 332138 332683 D heterodisulfide reductase subunit C 332138..332683 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039600 YP_002308913.1 CDS CFPG_239 NC_011565.1 332683 333528 D heterodisulfide reductase subunit B 332683..333528 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039611 YP_002308914.1 CDS CFPG_240 NC_011565.1 333962 335965 D heterodisulfide reductase subunit A 333962..335965 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039582 YP_002308915.1 CDS CFPG_241 NC_011565.1 336184 336669 D heterodisulfide reductase subunit MvhD 336184..336669 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039598 YP_002308916.1 CDS CFPG_242 NC_011565.1 336662 337465 D hydrogenase 4Fe-4S binding subunit 336662..337465 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039595 YP_002308917.1 CDS CFPG_243 NC_011565.1 337481 338488 D hydrogenase beta subunit 337481..338488 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039520 YP_002308918.1 CDS eno NC_011565.1 339166 340452 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(339166..340452) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039517 YP_002308919.1 CDS ileS NC_011565.1 341126 344521 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 341126..344521 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039565 YP_002308920.1 CDS CFPG_246 NC_011565.1 344614 344991 D DnaK suppressor protein 344614..344991 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039564 YP_002308921.1 CDS CFPG_247 NC_011565.1 344996 345613 D signal peptidase II 344996..345613 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039562 YP_002308922.1 CDS CFPG_248 NC_011565.1 346095 346673 D hypothetical protein 346095..346673 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039561 YP_002308923.1 CDS CFPG_249 NC_011565.1 346975 348654 D H+/peptide symporter 346975..348654 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039534 YP_002308924.1 CDS CFPG_250 NC_011565.1 348703 349149 R hypothetical protein complement(348703..349149) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039559 YP_002308925.1 CDS CFPG_251 NC_011565.1 349240 350256 D DNA polymerase III subunit delta 349240..350256 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039530 YP_002308926.1 CDS CFPG_252 NC_011565.1 351245 352183 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(351245..352183) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039526 YP_002308927.1 CDS CFPG_253 NC_011565.1 352217 353239 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(352217..353239) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039524 YP_002308928.1 CDS CFPG_254 NC_011565.1 353386 354339 D methylenetetrahydrofolate reductase 353386..354339 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039516 YP_002308929.1 CDS CFPG_255 NC_011565.1 354343 355479 D DNA polymerase III subunit delta' 354343..355479 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039512 YP_002308930.1 CDS CFPG_256 NC_011565.1 355494 356561 D hypothetical protein 355494..356561 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039545 YP_002308931.1 CDS CFPG_257 NC_011565.1 356609 357133 D hypothetical protein 356609..357133 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039544 YP_002308932.1 CDS CFPG_258 NC_011565.1 357146 358321 D iron-containing alcohol dehydrogenase 357146..358321 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039504 YP_002308933.1 CDS trmE NC_011565.1 358501 359895 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 358501..359895 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039409 YP_002308934.1 CDS CFPG_260 NC_011565.1 362890 363327 D hypothetical protein 362890..363327 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039426 YP_002308935.1 CDS CFPG_261 NC_011565.1 363460 363687 D ferredoxin 363460..363687 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039532 YP_002308936.1 CDS CFPG_262 NC_011565.1 363761 364960 D anaerobic nitric oxide reductase 363761..364960 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039470 YP_002308937.1 CDS CFPG_263 NC_011565.1 365263 366336 D catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase 365263..366336 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039515 YP_002308938.1 CDS CFPG_264 NC_011565.1 366336 367091 D 2-oxoisovalerate ferredoxin oxidoreductase beta subunit 366336..367091 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039514 YP_002308939.1 CDS CFPG_265 NC_011565.1 367097 367642 D 2-oxoisovalerate ferredoxin oxidoreductase gamma subunit 367097..367642 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039507 YP_002308940.1 CDS CFPG_266 NC_011565.1 370989 372863 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(370989..372863) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039503 YP_002308941.1 CDS CFPG_267 NC_011565.1 372860 373279 R hypothetical protein complement(372860..373279) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039501 YP_002308942.1 CDS CFPG_268 NC_011565.1 373340 376126 R DNA polymerase I complement(373340..376126) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039471 YP_002308943.1 CDS CFPG_269 NC_011565.1 376203 377189 D octaprenyl-diphosphate synthase 376203..377189 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039442 YP_002308944.1 CDS CFPG_270 NC_011565.1 377211 378314 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 377211..378314 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039467 YP_002308945.1 CDS CFPG_271 NC_011565.1 378680 379627 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 378680..379627 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039454 YP_002308946.1 CDS CFPG_272 NC_011565.1 379813 380613 D phosphate ABC transporter ATP-binding protein 379813..380613 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039453 YP_002308947.1 CDS CFPG_273 NC_011565.1 380697 383057 D ferredoxin-nitrite reductase 380697..383057 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039428 YP_002308948.1 CDS CFPG_274 NC_011565.1 383254 384060 D molybdopterin biosynthesis protein MoeB 383254..384060 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039389 YP_002308949.1 CDS CFPG_275 NC_011565.1 384394 385371 D phosphate ABC transporter substrate-binding protein 384394..385371 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039419 YP_002308950.1 CDS CFPG_276 NC_011565.1 385454 386347 D phosphate ABC transporter permease 385454..386347 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039416 YP_002308951.1 CDS CFPG_277 NC_011565.1 386344 387195 D phosphate ABC transporter permease 386344..387195 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039415 YP_002308952.1 CDS CFPG_278 NC_011565.1 387313 389361 D hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase 387313..389361 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039346 YP_002308953.1 CDS CFPG_279 NC_011565.1 389368 390333 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 389368..390333 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039368 YP_002308954.1 CDS CFPG_280 NC_011565.1 390323 391225 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 390323..391225 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039398 YP_002308955.1 CDS CFPG_281 NC_011565.1 391252 392520 D sulfate adenylyltransferase subunit 1 391252..392520 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039393 YP_002308956.1 CDS CFPG_282 NC_011565.1 392532 393233 D phosphoadenosine phosphosulfate reductase 392532..393233 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039379 YP_002308957.1 CDS CFPG_283 NC_011565.1 393230 393688 D siroheme synthase 393230..393688 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039365 YP_002308958.1 CDS rplM NC_011565.1 393809 394264 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 393809..394264 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039332 YP_002308959.1 CDS rpsI NC_011565.1 394274 394660 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 394274..394660 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039360 YP_002308960.1 CDS CFPG_286 NC_011565.1 394690 395478 D 30S ribosomal protein S2 394690..395478 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039358 YP_002308961.1 CDS tsf NC_011565.1 395495 396319 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 395495..396319 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039298 YP_002308962.1 CDS groES NC_011565.1 396513 396788 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 396513..396788 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039321 YP_002308963.1 CDS groEL NC_011565.1 396826 398454 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 396826..398454 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039348 YP_002308964.1 CDS CFPG_290 NC_011565.1 398743 399306 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 398743..399306 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039324 YP_002308965.1 CDS CFPG_291 NC_011565.1 399309 400403 R hypothetical protein complement(399309..400403) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039319 YP_002308966.1 CDS CFPG_292 NC_011565.1 400844 401536 D hypothetical protein 400844..401536 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039317 YP_002308967.1 CDS CFPG_293 NC_011565.1 401618 402499 R dTDP-4-dehydrorhamnose reductase complement(401618..402499) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039315 YP_002308968.1 CDS CFPG_294 NC_011565.1 403301 403870 D phosphoribosylglycinamide formyltransferase 403301..403870 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039287 YP_002308969.1 CDS CFPG_295 NC_011565.1 404530 404880 R ribosome-binding factor A complement(404530..404880) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039280 YP_002308970.1 CDS CFPG_296 NC_011565.1 404902 408018 R exodeoxyribonuclease V beta subunit complement(404902..408018) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039311 YP_002308971.1 CDS miaA NC_011565.1 408061 408981 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 408061..408981 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039307 YP_002308972.1 CDS CFPG_298 NC_011565.1 408962 410104 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(408962..410104) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039264 YP_002308973.1 CDS CFPG_299 NC_011565.1 410128 410718 R molecular chaperone GrpE complement(410128..410718) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039297 YP_002308974.1 CDS cysS NC_011565.1 411443 412921 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(411443..412921) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039294 YP_002308975.1 CDS CFPG_301 NC_011565.1 413490 414218 D biotin-[acetyl-CoA-carboxylase] ligase 413490..414218 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039284 YP_002308976.1 CDS CFPG_302 NC_011565.1 414213 414803 R glutamine amidotransferase subunit PdxT complement(414213..414803) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039285 YP_002308977.1 CDS CFPG_303 NC_011565.1 414808 415704 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(414808..415704) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039278 YP_002308978.1 CDS CFPG_304 NC_011565.1 415994 417202 D saccharopine dehydrogenase 415994..417202 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039276 YP_002308979.1 CDS CFPG_305 NC_011565.1 417502 418425 D malate dehydrogenase 417502..418425 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039273 YP_002308980.1 CDS CFPG_306 NC_011565.1 418532 418798 D hypothetical protein 418532..418798 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039248 YP_002308981.1 CDS CFPG_307 NC_011565.1 419906 420532 D phosphatase 419906..420532 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039151 YP_002308982.1 CDS CFPG_308 NC_011565.1 423764 424186 D cysteine desulfuration protein SufE 423764..424186 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039444 YP_002308983.1 CDS CFPG_309 NC_011565.1 424190 424732 D rRNA methyltransferase 424190..424732 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039260 YP_002308984.1 CDS CFPG_310 NC_011565.1 425451 427280 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 425451..427280 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039258 YP_002308985.1 CDS CFPG_311 NC_011565.1 427758 428849 R functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase complement(427758..428849) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039246 YP_002308986.1 CDS CFPG_312 NC_011565.1 429101 433627 D glutamate synthase large subunit 429101..433627 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039166 YP_002308987.1 CDS CFPG_313 NC_011565.1 433703 435118 D glutamate synthase small subunit 433703..435118 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039234 YP_002308988.1 CDS asnB NC_011565.1 435174 436886 D functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 435174..436886 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039233 YP_002308989.1 CDS CFPG_315 NC_011565.1 437012 439276 R kef-type K+(efflux) /H+ antiporter complement(437012..439276) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039226 YP_002308990.1 CDS CFPG_316 NC_011565.1 439460 441478 D excinuclease ABC subunit B 439460..441478 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039221 YP_002308991.1 CDS CFPG_317 NC_011565.1 442399 443418 R aspartate-semialdehyde dehydrogenase complement(442399..443418) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039188 YP_002308992.1 CDS CFPG_318 NC_011565.1 443578 444546 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(443578..444546) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039208 YP_002308993.1 CDS CFPG_319 NC_011565.1 444605 446740 R peptidyl-prolyl cis-trans isomerase complement(444605..446740) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039207 YP_002308994.1 CDS CFPG_320 NC_011565.1 446838 447467 R O-methyltransferase family protein complement(446838..447467) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039204 YP_002308995.1 CDS CFPG_321 NC_011565.1 447464 447883 R 3-dehydroquinate dehydratase complement(447464..447883) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039200 YP_002308996.1 CDS CFPG_322 NC_011565.1 447955 448854 D site-specific recombinase XerD 447955..448854 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039197 YP_002308997.1 CDS CFPG_323 NC_011565.1 448991 450118 D acetylornithine aminotransferase 448991..450118 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039162 YP_002308998.1 CDS CFPG_324 NC_011565.1 450149 450958 D pyrroline-5-carboxylate reductase 450149..450958 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039179 YP_002308999.1 CDS CFPG_325 NC_011565.1 452346 453308 D glucokinase 452346..453308 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039157 YP_002309000.1 CDS ruvB NC_011565.1 454186 455205 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 454186..455205 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039154 YP_002309001.1 CDS CFPG_327 NC_011565.1 455215 456702 D polysaccharide biosynthesis protein 455215..456702 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039153 YP_002309002.1 CDS CFPG_328 NC_011565.1 457818 459467 R permease YidE-like protein complement(457818..459467) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039333 YP_002309003.1 CDS CFPG_329 NC_011565.1 462053 462568 R cob(I)alamin adenosyltransferase complement(462053..462568) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040027 YP_002309004.1 CDS CFPG_330 NC_011565.1 465831 466922 D A/G-specific adenine glycosylase 465831..466922 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039995 YP_002309005.1 CDS CFPG_331 NC_011565.1 467001 467459 D single-strand DNA-binding protein 467001..467459 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040017 YP_002309006.1 CDS mnmA NC_011565.1 467536 468603 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 467536..468603 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039816 YP_002309007.1 CDS CFPG_333 NC_011565.1 468694 469767 D mannose-1-phosphate guanylyltransferase 468694..469767 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039187 YP_002309008.1 CDS valS NC_011565.1 469962 472583 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(469962..472583) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039194 YP_002309009.1 CDS CFPG_335 NC_011565.1 472770 473078 D DNA-binding protein HU 472770..473078 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039171 YP_002309010.1 CDS CFPG_336 NC_011565.1 473547 474593 R ketol-acid reductoisomerase complement(473547..474593) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039168 YP_002309011.1 CDS secA NC_011565.1 474870 478229 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 474870..478229 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039164 YP_002309012.1 CDS CFPG_338 NC_011565.1 478576 480132 D ribonuclease G 478576..480132 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039156 YP_002309013.1 CDS CFPG_339 NC_011565.1 480209 482938 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 480209..482938 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039184 YP_002309014.1 CDS CFPG_340 NC_011565.1 483619 485337 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(483619..485337) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039299 YP_002309015.1 CDS CFPG_341 NC_011565.1 485409 485717 D hypothetical protein 485409..485717 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039169 YP_002309016.1 CDS CFPG_342 NC_011565.1 486015 487124 R 2-nitropropane dioxygenase complement(486015..487124) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039146 YP_002309017.1 CDS CFPG_343 NC_011565.1 487235 488803 D L-aspartate oxidase 487235..488803 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039152 YP_002309018.1 CDS CFPG_344 NC_011565.1 489606 490604 R glyceraldehyde 3-phosphate dehydrogenase complement(489606..490604) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039143 YP_002309019.1 CDS CFPG_345 NC_011565.1 490856 491908 R 4-amino-4-deoxychorismate lyase complement(490856..491908) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039141 YP_002309020.1 CDS era NC_011565.1 491915 492817 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(491915..492817) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040034 YP_002309021.1 CDS argC NC_011565.1 492807 493763 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(492807..493763) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040033 YP_002309022.1 CDS CFPG_348 NC_011565.1 494877 496079 R argininosuccinate synthase complement(494877..496079) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040015 YP_002309023.1 CDS CFPG_349 NC_011565.1 496129 496668 R hypothetical protein complement(496129..496668) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040032 YP_002309024.1 CDS CFPG_350 NC_011565.1 499360 499674 R thioredoxin complement(499360..499674) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040028 YP_002309025.1 CDS CFPG_351 NC_011565.1 499729 503418 R DNA polymerase III subunit alpha complement(499729..503418) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040003 YP_002309026.1 CDS CFPG_352 NC_011565.1 503942 504889 D transporter 503942..504889 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040023 YP_002309027.1 CDS CFPG_353 NC_011565.1 505227 505850 R hypothetical protein complement(505227..505850) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039592 YP_002309028.1 CDS CFPG_354 NC_011565.1 505850 507268 R signal peptidase I complement(505850..507268) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040008 YP_002309029.1 CDS CFPG_355 NC_011565.1 507292 507993 R dihydrodipicolinate reductase complement(507292..507993) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039191 YP_002309030.1 CDS CFPG_356 NC_011565.1 511608 512810 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(511608..512810) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039420 YP_002309031.1 CDS rpsT NC_011565.1 512967 513221 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(512967..513221) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039290 YP_002309032.1 CDS CFPG_358 NC_011565.1 513386 515161 R 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(513386..515161) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039382 YP_002309033.1 CDS CFPG_359 NC_011565.1 515193 515699 R phosphoribosylaminoimidazole carboxylase catalytic subunit complement(515193..515699) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039201 YP_002309034.1 CDS CFPG_360 NC_011565.1 516347 516988 R hypothetical protein complement(516347..516988) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039267 YP_002309035.1 CDS CFPG_361 NC_011565.1 517132 518793 R carboxyl-terminal processing protease complement(517132..518793) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039262 YP_002309036.1 CDS CFPG_362 NC_011565.1 519224 520180 R undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase complement(519224..520180) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039380 YP_002309037.1 CDS rpsO NC_011565.1 520278 520547 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 520278..520547 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039259 YP_002309038.1 CDS CFPG_364 NC_011565.1 520556 521425 R produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(520556..521425) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039231 YP_002309039.1 CDS CFPG_365 NC_011565.1 521464 523044 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(521464..523044) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039199 YP_002309040.1 CDS CFPG_366 NC_011565.1 523032 523565 R F-type ATP synthase delta subunit complement(523032..523565) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039219 YP_002309041.1 CDS CFPG_367 NC_011565.1 523602 524090 R F-type ATP synthase B subunit complement(523602..524090) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039241 YP_002309042.1 CDS CFPG_368 NC_011565.1 524105 524353 R F-type ATP synthase C subunit complement(524105..524353) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039237 YP_002309043.1 CDS CFPG_369 NC_011565.1 524672 525772 R F-type ATP synthase A subunit complement(524672..525772) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039236 YP_002309044.1 CDS CFPG_370 NC_011565.1 526165 527475 R membrane-associated Zn-dependent protease complement(526165..527475) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039228 YP_002309045.1 CDS CFPG_371 NC_011565.1 527472 528635 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(527472..528635) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039224 YP_002309046.1 CDS CFPG_372 NC_011565.1 528943 531714 D excinuclease ABC subunit A 528943..531714 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039203 YP_002309047.1 CDS CFPG_373 NC_011565.1 531734 532252 D acetyltransferase 531734..532252 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039376 YP_002309048.1 CDS CFPG_374 NC_011565.1 532805 533467 D uracil-DNA glycosylase 532805..533467 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039310 YP_002309049.1 CDS CFPG_375 NC_011565.1 533635 536145 R hypothetical protein complement(533635..536145) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039405 YP_002309050.1 CDS CFPG_376 NC_011565.1 537095 538048 R N-acetylornithine carbamoyltransferase complement(537095..538048) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039357 YP_002309051.1 CDS CFPG_377 NC_011565.1 538411 538911 D regulatory protein RecX 538411..538911 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039296 YP_002309052.1 CDS CFPG_378 NC_011565.1 538901 539932 R hypothetical protein complement(538901..539932) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039349 YP_002309053.1 CDS CFPG_379 NC_011565.1 540002 540598 R hypothetical protein complement(540002..540598) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039289 YP_002309054.1 CDS CFPG_380 NC_011565.1 540985 541242 D acyl carrier protein 540985..541242 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039347 YP_002309055.1 CDS CFPG_381 NC_011565.1 541478 542533 D succinyl-diaminopimelate desuccinylase 541478..542533 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039336 YP_002309056.1 CDS CFPG_382 NC_011565.1 542855 543745 D molybdenum cofactor biosynthesis protein A 542855..543745 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039249 YP_002309057.1 CDS rplS NC_011565.1 543899 544252 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 543899..544252 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039301 YP_002309058.1 CDS CFPG_384 NC_011565.1 544437 547088 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(544437..547088) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039327 YP_002309059.1 CDS CFPG_385 NC_011565.1 547436 547960 R 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(547436..547960) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039326 YP_002309060.1 CDS CFPG_386 NC_011565.1 548026 548844 R small conductance mechanosensitive ion channel complement(548026..548844) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039325 YP_002309061.1 CDS CFPG_387 NC_011565.1 549238 549702 D hypothetical protein 549238..549702 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039323 YP_002309062.1 CDS CFPG_388 NC_011565.1 549720 550700 D hypothetical protein 549720..550700 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039295 YP_002309063.1 CDS CFPG_389 NC_011565.1 551587 552171 D anthranilate synthase component II 551587..552171 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039279 YP_002309064.1 CDS CFPG_390 NC_011565.1 552205 553230 D anthranilate phosphoribosyltransferase 552205..553230 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039448 YP_002309065.1 CDS CFPG_391 NC_011565.1 553248 554036 D indole-3-glycerol phosphate synthase 553248..554036 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039449 YP_002309066.1 CDS CFPG_392 NC_011565.1 554033 554647 D phosphoribosylanthranilate isomerase 554033..554647 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039418 YP_002309067.1 CDS trpA NC_011565.1 554663 555433 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 554663..555433 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039385 YP_002309068.1 CDS CFPG_394 NC_011565.1 555453 556955 D replicative DNA helicase DnaB 555453..556955 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039438 YP_002309069.1 CDS CFPG_395 NC_011565.1 557179 557877 D NAD-dependent deacetylase 557179..557877 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039344 YP_002309070.1 CDS CFPG_396 NC_011565.1 558977 562651 D cobalamin-dependent methionine synthase 558977..562651 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039403 YP_002309071.1 CDS CFPG_397 NC_011565.1 562651 563241 D Holliday junction DNA helicase RuvA 562651..563241 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039432 YP_002309072.1 CDS CFPG_398 NC_011565.1 563277 564332 R 3-dehydroquinate synthase complement(563277..564332) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039431 YP_002309073.1 CDS CFPG_399 NC_011565.1 564579 564977 R hypothetical protein complement(564579..564977) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039423 YP_002309074.1 CDS CFPG_400 NC_011565.1 564974 565444 R transcription elongation factor GreA complement(564974..565444) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039422 YP_002309075.1 CDS CFPG_401 NC_011565.1 566577 567449 D hypothetical protein 566577..567449 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039359 YP_002309076.1 CDS CFPG_402 NC_011565.1 567471 568088 D guanylate kinase 567471..568088 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039417 YP_002309077.1 CDS CFPG_403 NC_011565.1 568085 568657 D nicotinate-nucleotide adenylyltransferase 568085..568657 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039410 YP_002309078.1 CDS CFPG_404 NC_011565.1 568739 569998 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 568739..569998 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039407 YP_002309079.1 CDS CFPG_405 NC_011565.1 570027 570713 D Zn-dependent protease 570027..570713 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039371 YP_002309080.1 CDS CFPG_406 NC_011565.1 570737 571303 D hypothetical protein 570737..571303 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039370 YP_002309081.1 CDS CFPG_407 NC_011565.1 571340 571786 R ribose 5-phosphate isomerase B complement(571340..571786) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039369 YP_002309082.1 CDS CFPG_408 NC_011565.1 571793 573817 R transketolase complement(571793..573817) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039367 YP_002309083.1 CDS CFPG_409 NC_011565.1 574565 575347 R iron ABC transporter ATP-binding protein complement(574565..575347) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039364 YP_002309084.1 CDS CFPG_410 NC_011565.1 575351 576592 R Zn-dependent protease complement(575351..576592) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039397 YP_002309085.1 CDS CFPG_411 NC_011565.1 576806 576997 R 30S ribosomal protein S21 complement(576806..576997) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039485 YP_002309086.1 CDS CFPG_412 NC_011565.1 577640 579277 D carboxyl-terminal processing protease 577640..579277 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039478 YP_002309087.1 CDS CFPG_413 NC_011565.1 579531 581765 D GTP pyrophosphokinase 579531..581765 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039499 YP_002309088.1 CDS CFPG_414 NC_011565.1 581762 582055 R hypothetical protein complement(581762..582055) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039500 YP_002309089.1 CDS CFPG_415 NC_011565.1 582933 583757 R 23S rRNA (guanosine-2'-O-)-methyltransferase complement(582933..583757) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039496 YP_002309090.1 CDS CFPG_416 NC_011565.1 584085 586133 R 1,4-alpha-glucan-branching protein complement(584085..586133) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039445 YP_002309091.1 CDS CFPG_417 NC_011565.1 587127 587480 D NADH dehydrogenase I subunit A 587127..587480 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039469 YP_002309092.1 CDS CFPG_418 NC_011565.1 587501 588076 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 587501..588076 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039484 YP_002309093.1 CDS CFPG_419 NC_011565.1 588073 589674 D NADH dehydrogenase I subunit CD 588073..589674 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039479 YP_002309094.1 CDS CFPG_420 NC_011565.1 590031 591098 D NADH dehydrogenase I subunit H 590031..591098 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039443 YP_002309095.1 CDS CFPG_421 NC_011565.1 591095 591553 D NADH dehydrogenase I subunit I 591095..591553 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039468 YP_002309096.1 CDS CFPG_422 NC_011565.1 591558 592079 D NADH dehydrogenase I subunit J 591558..592079 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039461 YP_002309097.1 CDS CFPG_423 NC_011565.1 592717 593025 D NADH dehydrogenase I subunit K 592717..593025 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039408 YP_002309098.1 CDS CFPG_424 NC_011565.1 593809 595113 D tyrosyl-tRNA synthetase 593809..595113 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039556 YP_002309099.1 CDS CFPG_425 NC_011565.1 595470 596369 D site-specific recombinase XerC 595470..596369 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039402 YP_002309100.1 CDS CFPG_426 NC_011565.1 596717 597508 R N-acetylmuramoyl-L-alanine amidase complement(596717..597508) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039547 YP_002309101.1 CDS CFPG_427 NC_011565.1 597919 598332 R 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(597919..598332) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039458 YP_002309102.1 CDS CFPG_428 NC_011565.1 598332 599396 R S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(598332..599396) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039518 YP_002309103.1 CDS CFPG_429 NC_011565.1 599406 600086 R tRNA pseudouridine synthase B complement(599406..600086) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039549 YP_002309104.1 CDS CFPG_430 NC_011565.1 600100 600324 R hypothetical protein complement(600100..600324) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039505 YP_002309105.1 CDS CFPG_431 NC_011565.1 600337 601221 R cell division protein FtsX complement(600337..601221) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039483 YP_002309106.1 CDS CFPG_432 NC_011565.1 603969 605084 D oxygen-independent coproporphyrinogen III oxidase 603969..605084 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039644 YP_002309107.1 CDS CFPG_433 NC_011565.1 605062 605526 R hypothetical protein complement(605062..605526) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039502 YP_002309108.1 CDS CFPG_434 NC_011565.1 606072 606752 D molybdate ABC transporter permease 606072..606752 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039538 YP_002309109.1 CDS CFPG_435 NC_011565.1 606749 607402 D molybdate ABC transporter ATP-binding protein 606749..607402 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039492 YP_002309110.1 CDS CFPG_436 NC_011565.1 607506 608987 D acetyl-CoA hydrolase/transferase 607506..608987 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039522 YP_002309111.1 CDS CFPG_437 NC_011565.1 609007 609924 R transcription termination factor NusB complement(609007..609924) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039599 YP_002309112.1 CDS CFPG_438 NC_011565.1 610156 611334 R aspartate aminotransferase complement(610156..611334) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039613 YP_002309113.1 CDS CFPG_439 NC_011565.1 611368 612345 R NADP-dependent thioredoxin reductase complement(611368..612345) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039610 YP_002309114.1 CDS CFPG_440 NC_011565.1 613058 615388 R DNA translocase FtsK complement(613058..615388) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039531 YP_002309115.1 CDS CFPG_441 NC_011565.1 615406 617418 R DNA primase complement(615406..617418) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039608 YP_002309116.1 CDS CFPG_442 NC_011565.1 618304 619023 R DNA alkylation repair protein complement(618304..619023) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039575 YP_002309117.1 CDS CFPG_443 NC_011565.1 619031 620380 R ArsB/NhaD family permease complement(619031..620380) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039597 YP_002309118.1 CDS CFPG_444 NC_011565.1 620801 623245 D 4-alpha-glucanotransferase 620801..623245 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039594 YP_002309119.1 CDS CFPG_445 NC_011565.1 624277 625089 D catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 624277..625089 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039646 YP_002309120.1 CDS CFPG_446 NC_011565.1 626227 627060 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(626227..627060) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039653 YP_002309121.1 CDS CFPG_447 NC_011565.1 627268 628740 D hypothetical protein 627268..628740 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039652 YP_002309122.1 CDS CFPG_448 NC_011565.1 628862 632407 D pyruvate-flavodoxin oxidoreductase 628862..632407 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039626 YP_002309123.1 CDS CFPG_449 NC_011565.1 632927 633454 D chromate exporter 632927..633454 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039650 YP_002309124.1 CDS CFPG_450 NC_011565.1 633471 634295 D hypothetical protein 633471..634295 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039612 YP_002309125.1 CDS CFPG_451 NC_011565.1 634308 635330 D hemolysin A 634308..635330 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039635 YP_002309126.1 CDS CFPG_452 NC_011565.1 636901 638874 R hypothetical protein complement(636901..638874) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039609 YP_002309127.1 CDS CFPG_453 NC_011565.1 639209 639874 D fumarate reductase cytochrome b subunit 639209..639874 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039627 YP_002309128.1 CDS sdhA NC_011565.1 639871 641814 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 639871..641814 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039277 YP_002309129.1 CDS CFPG_455 NC_011565.1 641971 642726 D succinate dehydrogenase/fumarate reductase iron-sulfur subunit 641971..642726 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040014 YP_002309130.1 CDS CFPG_456 NC_011565.1 643432 644031 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 643432..644031 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039509 YP_002309131.1 CDS CFPG_457 NC_011565.1 644021 644728 D cell division protein FtsE 644021..644728 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039148 YP_002309132.1 CDS CFPG_458 NC_011565.1 644728 645876 D diaminopimelate decarboxylase 644728..645876 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039163 YP_002309133.1 CDS CFPG_459 NC_011565.1 646157 646876 D hypothetical protein 646157..646876 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040026 YP_002309134.1 CDS CFPG_460 NC_011565.1 646998 647546 D dTDP-4-dehydrorhamnose 3,5-epimerase 646998..647546 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039192 YP_002309135.1 CDS CFPG_461 NC_011565.1 647543 648406 D glucose-1-phosphate thymidylyltransferase 647543..648406 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039174 YP_002309136.1 CDS CFPG_462 NC_011565.1 648665 649780 D dTDP-glucose 4,6-dehydratase 648665..649780 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039160 YP_002309137.1 CDS rimM NC_011565.1 649820 650335 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(649820..650335) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039205 YP_002309138.1 CDS CFPG_464 NC_011565.1 650332 651639 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(650332..651639) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039776 YP_002309139.1 CDS obgE NC_011565.1 651753 652766 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(651753..652766) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039773 YP_002309140.1 CDS adk NC_011565.1 652777 653352 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(652777..653352) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039215 YP_002309141.1 CDS CFPG_467 NC_011565.1 653768 654319 R hypoxanthine phosphoribosyltransferase complement(653768..654319) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039202 YP_002309142.1 CDS CFPG_468 NC_011565.1 654400 656028 R fumarate hydratase complement(654400..656028) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039784 YP_002309143.1 CDS CFPG_469 NC_011565.1 656178 658337 R polynucleotide phosphorylase/polyadenylase complement(656178..658337) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039667 YP_002309144.1 CDS CFPG_470 NC_011565.1 663940 665184 R hypothetical protein complement(663940..665184) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039774 YP_002309145.1 CDS CFPG_471 NC_011565.1 665515 666420 R hypothetical protein complement(665515..666420) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039182 YP_002309146.1 CDS CFPG_472 NC_011565.1 666530 667840 R O-acetylhomoserine (thiol)-lyase complement(666530..667840) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039245 YP_002309147.1 CDS CFPG_473 NC_011565.1 671809 672933 D homocitrate synthase 671809..672933 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039218 YP_002309148.1 CDS CFPG_474 NC_011565.1 673011 674576 D Nif-specific regulatory protein 673011..674576 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039178 YP_002309149.1 CDS CFPG_475 NC_011565.1 674891 676429 D hypothetical protein 674891..676429 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039206 YP_002309150.1 CDS CFPG_476 NC_011565.1 676702 678060 D UDP-N-acetylmuramoylalanine--D-glutamate ligase 676702..678060 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039222 YP_002309151.1 CDS CFPG_477 NC_011565.1 678079 679260 D cell division protein FtsW 678079..679260 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039227 YP_002309152.1 CDS CFPG_478 NC_011565.1 681395 681754 D hypothetical protein 681395..681754 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039254 YP_002309153.1 CDS rpsA NC_011565.1 681787 683625 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 681787..683625 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039242 YP_002309154.1 CDS CFPG_480 NC_011565.1 685064 686449 D catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase 685064..686449 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039263 YP_002309155.1 CDS CFPG_481 NC_011565.1 686854 687402 D hypothetical protein 686854..687402 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039238 YP_002309156.1 CDS CFPG_482 NC_011565.1 687694 688830 R hypothetical protein complement(687694..688830) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039286 YP_002309157.1 CDS CFPG_483 NC_011565.1 688840 690273 R hypothetical protein complement(688840..690273) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039302 YP_002309158.1 CDS CFPG_484 NC_011565.1 690279 690581 R hypothetical protein complement(690279..690581) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039275 YP_002309159.1 CDS pyrB NC_011565.1 691638 692546 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 691638..692546 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039172 YP_002309160.1 CDS CFPG_486 NC_011565.1 692541 693545 R UDP-N-acetylmuramate dehydrogenase complement(692541..693545) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039265 YP_002309161.1 CDS ksgA NC_011565.1 693619 694407 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 693619..694407 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039293 YP_002309162.1 CDS CFPG_488 NC_011565.1 694549 695880 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(694549..695880) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039339 YP_002309163.1 CDS pyrE NC_011565.1 696294 696935 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(696294..696935) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039314 YP_002309164.1 CDS CFPG_490 NC_011565.1 699099 700448 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(699099..700448) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039782 YP_002309165.1 CDS CFPG_491 NC_011565.1 701200 701562 D hypothetical protein 701200..701562 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039320 YP_002309166.1 CDS CFPG_492 NC_011565.1 701731 702696 D geranylgeranyl pyrophosphate synthetase 701731..702696 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039372 YP_002309167.1 CDS CFPG_493 NC_011565.1 702863 703633 D deoxyribonuclease 702863..703633 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039355 YP_002309168.1 CDS recR NC_011565.1 705504 706133 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(705504..706133) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039847 YP_002309169.1 CDS CFPG_495 NC_011565.1 706216 706962 R 3-oxoacyl-ACP reductase complement(706216..706962) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039352 YP_002309170.1 CDS CFPG_496 NC_011565.1 707328 709610 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(707328..709610) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039836 YP_002309171.1 CDS CFPG_497 NC_011565.1 709784 714133 D carbamoyl-phosphate synthase 709784..714133 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039589 YP_002309172.1 CDS CFPG_498 NC_011565.1 714217 715338 D hypothetical protein 714217..715338 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039375 YP_002309173.1 CDS CFPG_499 NC_011565.1 715519 716748 R hypothetical protein complement(715519..716748) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039392 YP_002309174.1 CDS CFPG_500 NC_011565.1 716777 717616 R orotidine-5'-phosphate decarboxylase complement(716777..717616) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039399 YP_002309175.1 CDS CFPG_501 NC_011565.1 717637 718716 R peptide chain release factor 1 complement(717637..718716) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039394 YP_002309176.1 CDS CFPG_502 NC_011565.1 718745 719881 R glycosyltransferase complement(718745..719881) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039363 YP_002309177.1 CDS CFPG_503 NC_011565.1 720812 721456 R ribosomal-protein-serine acetyltransferase complement(720812..721456) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039401 YP_002309178.1 CDS CFPG_504 NC_011565.1 721461 723191 R glucosamine--fructose-6-phosphate aminotransferase complement(721461..723191) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039411 YP_002309179.1 CDS CFPG_505 NC_011565.1 723475 725424 D glycogen debranching protein 723475..725424 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039424 YP_002309180.1 CDS CFPG_506 NC_011565.1 725450 726706 D glycogen synthase 725450..726706 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039322 YP_002309181.1 CDS CFPG_507 NC_011565.1 729471 730760 D alpha-amylase 729471..730760 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039827 YP_002309182.1 CDS CFPG_508 NC_011565.1 731209 731814 D hypothetical protein 731209..731814 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039425 YP_002309183.1 CDS CFPG_509 NC_011565.1 731821 732315 R dihydrofolate reductase complement(731821..732315) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039787 YP_002309184.1 CDS CFPG_510 NC_011565.1 732361 733131 R thymidylate synthase complement(732361..733131) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039477 YP_002309185.1 CDS CFPG_511 NC_011565.1 733374 734360 D peptide chain release factor 2 733374..734360 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039488 YP_002309186.1 CDS CFPG_512 NC_011565.1 734645 735988 D Na+-driven multidrug efflux pump NorM 734645..735988 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039440 YP_002309187.1 CDS CFPG_513 NC_011565.1 736149 737627 D xylulokinase 736149..737627 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039395 YP_002309188.1 CDS CFPG_514 NC_011565.1 737756 739081 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 737756..739081 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039450 YP_002309189.1 CDS xylE NC_011565.1 739132 740565 D xylose/proton symporter; member of the major facilitator superfamily (MFS) of transporter; D-xylose transporter XylE 739132..740565 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039441 YP_002309190.1 CDS dnaK NC_011565.1 741677 743602 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(741677..743602) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039343 YP_002309191.1 CDS alaS NC_011565.1 743825 746443 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(743825..746443) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039487 YP_002309192.1 CDS CFPG_518 NC_011565.1 746565 746939 D HTH-type transcriptional regulator 746565..746939 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039436 YP_002309193.1 CDS CFPG_519 NC_011565.1 746970 747821 R pyridoxine kinase complement(746970..747821) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039475 YP_002309194.1 CDS CFPG_520 NC_011565.1 748156 749319 D phosphoribosylformylglycinamidine cyclo-ligase 748156..749319 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039489 YP_002309195.1 CDS CFPG_521 NC_011565.1 750168 752363 R glutamine synthetase complement(750168..752363) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039494 YP_002309196.1 CDS CFPG_522 NC_011565.1 752662 753687 R UDP-glucose 4-epimerase complement(752662..753687) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039567 YP_002309197.1 CDS purH NC_011565.1 753846 755372 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 753846..755372 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039536 YP_002309198.1 CDS CFPG_524 NC_011565.1 755379 756398 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 755379..756398 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039481 YP_002309199.1 CDS CFPG_525 NC_011565.1 756399 757244 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 756399..757244 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039510 YP_002309200.1 CDS CFPG_526 NC_011565.1 757259 757777 D hypothetical protein 757259..757777 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039560 YP_002309201.1 CDS CFPG_527 NC_011565.1 757797 759650 D penicillin-binding protein 2 757797..759650 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039539 YP_002309202.1 CDS CFPG_528 NC_011565.1 759631 761112 D rod shape-determining protein RodA 759631..761112 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039616 YP_002309203.1 CDS CFPG_529 NC_011565.1 761342 761740 D methylmalonyl-CoA epimerase 761342..761740 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039793 YP_002309204.1 CDS CFPG_530 NC_011565.1 761812 763365 D methylmalonyl-CoA decarboxylase alpha subunit 761812..763365 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039579 YP_002309205.1 CDS CFPG_531 NC_011565.1 763395 764357 D hypothetical protein 763395..764357 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039602 YP_002309206.1 CDS CFPG_532 NC_011565.1 764354 764770 D methylmalonyl-CoA decarboxylase gamma subunit 764354..764770 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039577 YP_002309207.1 CDS CFPG_533 NC_011565.1 764775 765929 D Na+-transporting methylmalonyl-CoA decarboxylase beta subunit 764775..765929 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039789 YP_002309208.1 CDS CFPG_534 NC_011565.1 766157 766453 D RNA-binding protein RbpA 766157..766453 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039796 YP_002309209.1 CDS CFPG_535 NC_011565.1 768186 769175 D 1,4-dihydroxy-2-naphthoate octaprenyltransferase 768186..769175 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039551 YP_002309210.1 CDS rplU NC_011565.1 769552 769866 D 50S ribosomal protein L21 769552..769866 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039581 YP_002309211.1 CDS rpmA NC_011565.1 769886 770143 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 769886..770143 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039568 YP_002309212.1 CDS CFPG_538 NC_011565.1 770479 771753 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 770479..771753 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039546 YP_002309213.1 CDS CFPG_539 NC_011565.1 771762 772460 R global nitrogen regulator NtcA complement(771762..772460) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039576 YP_002309214.1 CDS CFPG_540 NC_011565.1 772775 773434 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 772775..773434 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039570 YP_002309215.1 CDS CFPG_541 NC_011565.1 773476 775284 R excinuclease ABC subunit C complement(773476..775284) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039645 YP_002309216.1 CDS clpX NC_011565.1 777929 779161 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(777929..779161) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039631 YP_002309217.1 CDS CFPG_543 NC_011565.1 779164 779832 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(779164..779832) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039805 YP_002309218.1 CDS CFPG_544 NC_011565.1 779855 781183 R trigger factor complement(779855..781183) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039271 YP_002309219.1 CDS CFPG_545 NC_011565.1 782754 783578 D nitrogenase iron protein NifH 782754..783578 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039176 YP_002309220.1 CDS CFPG_546 NC_011565.1 783813 784136 D nitrogen regulatory protein P-II 1 783813..784136 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039281 YP_002309221.1 CDS CFPG_547 NC_011565.1 784139 784510 D nitrogen regulatory protein P-II 2 784139..784510 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039762 YP_002309222.1 CDS CFPG_548 NC_011565.1 784554 786206 D nitrogenase molybdenum-iron protein alpha subunit 784554..786206 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039764 YP_002309223.1 CDS CFPG_549 NC_011565.1 786230 787612 D nitrogenase molybdenum-iron protein beta subunit 1 786230..787612 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039775 YP_002309224.1 CDS CFPG_550 NC_011565.1 787623 788966 D nitrogenase molybdenum-iron cofactor biosynthesis protein NifE 787623..788966 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039768 YP_002309225.1 CDS CFPG_551 NC_011565.1 788963 790426 D nitrogenase molybdenum-iron protein beta subunit 2 788963..790426 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039778 YP_002309226.1 CDS CFPG_552 NC_011565.1 790452 791711 D nitrogenase molybdenum-cofactor biosynthesis protein NifB 790452..791711 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039212 YP_002309227.1 CDS CFPG_553 NC_011565.1 791885 792187 D 2Fe-2S ferredoxin 791885..792187 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039767 YP_002309228.1 CDS CFPG_554 NC_011565.1 793485 796781 R hypothetical protein complement(793485..796781) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039766 YP_002309229.1 CDS CFPG_555 NC_011565.1 797966 798820 D deoxyribose-phosphate aldolase 797966..798820 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039318 YP_002309230.1 CDS CFPG_556 NC_011565.1 799242 799871 R membrane-associated phospholipid phosphatase complement(799242..799871) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039400 YP_002309231.1 CDS CFPG_557 NC_011565.1 799864 802017 R MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase complement(799864..802017) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039433 YP_002309232.1 CDS CFPG_558 NC_011565.1 802028 803893 R cobalamin-dependent methylmalonyl-CoA mutase large subunit complement(802028..803893) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039456 YP_002309233.1 CDS CFPG_559 NC_011565.1 804116 804745 D LysE-like exporter 804116..804745 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039429 YP_002309234.1 CDS CFPG_560 NC_011565.1 804803 805102 D hypothetical protein 804803..805102 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039624 YP_002309235.1 CDS CFPG_561 NC_011565.1 806133 807575 D peptidyl-prolyl cis-trans isomerase SurA 806133..807575 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039473 YP_002309236.1 CDS CFPG_562 NC_011565.1 807638 808327 R methyltransferase complement(807638..808327) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039341 YP_002309237.1 CDS CFPG_563 NC_011565.1 809005 810678 R catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase complement(809005..810678) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039406 YP_002309238.1 CDS CFPG_564 NC_011565.1 816379 816822 D hypothetical protein 816379..816822 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039300 YP_002309239.1 CDS CFPG_565 NC_011565.1 817802 818887 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 817802..818887 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039350 YP_002309240.1 CDS CFPG_566 NC_011565.1 818884 819855 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 818884..819855 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039331 YP_002309241.1 CDS CFPG_567 NC_011565.1 819837 820589 D shikimate 5-dehydrogenase 819837..820589 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039786 YP_002309242.1 CDS CFPG_568 NC_011565.1 820985 822331 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 820985..822331 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039462 YP_002309243.1 CDS CFPG_569 NC_011565.1 822431 823303 D ribosomal large subunit pseudouridine synthase B 822431..823303 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039525 YP_002309244.1 CDS asnC NC_011565.1 823314 824708 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 823314..824708 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039797 YP_002309245.1 CDS CFPG_571 NC_011565.1 825012 826217 D catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 825012..826217 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039474 YP_002309246.1 CDS guaA NC_011565.1 826678 828195 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 826678..828195 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039795 YP_002309247.1 CDS CFPG_573 NC_011565.1 831459 833981 D outer membrane protein assembly factor YaeT 831459..833981 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039542 YP_002309248.1 CDS CFPG_574 NC_011565.1 834648 835214 D OmpH-like outer membrane protein 834648..835214 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039804 YP_002309249.1 CDS CFPG_575 NC_011565.1 835245 836075 D glutamate racemase 835245..836075 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039800 YP_002309250.1 CDS CFPG_576 NC_011565.1 837638 838081 D hypothetical protein 837638..838081 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039662 YP_002309251.1 CDS CFPG_577 NC_011565.1 838167 838949 D dihydroorotate dehydrogenase electron transfer subunit 838167..838949 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039508 YP_002309252.1 CDS CFPG_578 NC_011565.1 838937 839845 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 838937..839845 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039414 YP_002309253.1 CDS CFPG_579 NC_011565.1 841183 842502 D signal recognition particle protein 841183..842502 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039554 YP_002309254.1 CDS pheT NC_011565.1 842513 844975 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 842513..844975 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039907 YP_002309255.1 CDS CFPG_581 NC_011565.1 845407 846939 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(845407..846939) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039943 YP_002309256.1 CDS CFPG_582 NC_011565.1 847157 848641 R NADPH-dependent glutamate synthase small subunit complement(847157..848641) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039936 YP_002309257.1 CDS CFPG_583 NC_011565.1 848670 849452 R ferredoxin-NADP(+) reductase subunit alpha complement(848670..849452) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039986 YP_002309258.1 CDS miaA NC_011565.1 849937 850860 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 849937..850860 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039991 YP_002309259.1 CDS CFPG_585 NC_011565.1 850857 851297 R cytosine/adenosine deaminase complement(850857..851297) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039967 YP_002309260.1 CDS CFPG_586 NC_011565.1 851496 851864 D hypothetical protein 851496..851864 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039921 YP_002309261.1 CDS CFPG_587 NC_011565.1 851861 853825 D cell division protease FtsH 851861..853825 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039925 YP_002309262.1 CDS CFPG_588 NC_011565.1 853897 854781 D phosphatidate cytidylyltransferase 853897..854781 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039931 YP_002309263.1 CDS CFPG_589 NC_011565.1 854797 856311 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 854797..856311 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039862 YP_002309264.1 CDS CFPG_590 NC_011565.1 856327 857724 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 856327..857724 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039802 YP_002309265.1 CDS CFPG_591 NC_011565.1 857767 858360 D 3-isopropylmalate dehydratase small subunit 857767..858360 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039945 YP_002309266.1 CDS CFPG_592 NC_011565.1 858350 859861 D D-citramalate synthase 858350..859861 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039988 YP_002309267.1 CDS CFPG_593 NC_011565.1 859885 861477 R PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase complement(859885..861477) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039841 YP_002309268.1 CDS CFPG_594 NC_011565.1 861676 862257 R Ham1-like deoxyribonucleotide triphosphate pyrophosphatase complement(861676..862257) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039783 YP_002309269.1 CDS CFPG_595 NC_011565.1 863273 864565 R UDP-glucose 6-dehydrogenase complement(863273..864565) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039961 YP_002309270.1 CDS CFPG_596 NC_011565.1 865087 865716 D glucose inhibited division protein B 865087..865716 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039941 YP_002309271.1 CDS CFPG_597 NC_011565.1 865771 866340 R SUA5 family translation factor complement(865771..866340) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039948 YP_002309272.1 CDS CFPG_598 NC_011565.1 866363 867214 R nicotinate-nucleotide pyrophosphorylase complement(866363..867214) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039939 YP_002309273.1 CDS CFPG_599 NC_011565.1 867220 868494 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(867220..868494) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039959 YP_002309274.1 CDS CFPG_600 NC_011565.1 868678 870504 R voltage-gated ClC-type chloride channel complement(868678..870504) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039924 YP_002309275.1 CDS CFPG_601 NC_011565.1 870473 874159 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(870473..874159) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039918 YP_002309276.1 CDS CFPG_602 NC_011565.1 874316 875965 D small conductance mechanosensitive ion channel 874316..875965 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039938 YP_002309277.1 CDS CFPG_603 NC_011565.1 877541 877945 R thioesterase complement(877541..877945) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039981 YP_002309278.1 CDS CFPG_604 NC_011565.1 877953 879200 R collagenase-like family U32 peptidase complement(877953..879200) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039963 YP_002309279.1 CDS CFPG_605 NC_011565.1 879641 881356 D acetolactate synthase large subunit 879641..881356 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039903 YP_002309280.1 CDS CFPG_606 NC_011565.1 881346 881891 D acetolactate synthase small subunit 881346..881891 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039901 YP_002309281.1 CDS CFPG_607 NC_011565.1 882028 882771 R 23S rRNA (guanosine-2'-O-)-methyltransferase complement(882028..882771) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039771 YP_002309282.1 CDS CFPG_608 NC_011565.1 884969 886309 R DNA recombination protein rmuC-like protein complement(884969..886309) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039865 YP_002309283.1 CDS CFPG_609 NC_011565.1 886382 887578 R phosphopantothenoylcysteine decarboxylase complement(886382..887578) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039872 YP_002309284.1 CDS CFPG_610 NC_011565.1 887666 888046 D YjgF-like translation initiation inhibitor 887666..888046 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039856 YP_002309285.1 CDS CFPG_611 NC_011565.1 888236 890467 D ATP-dependent DNA helicase II 888236..890467 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039880 YP_002309286.1 CDS CFPG_612 NC_011565.1 890623 891900 R ammonium transporter complement(890623..891900) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039781 YP_002309287.1 CDS CFPG_613 NC_011565.1 891925 892272 R nitrogen regulatory protein P-II 3 complement(891925..892272) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039833 YP_002309288.1 CDS surE NC_011565.1 892703 893494 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(892703..893494) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039992 YP_002309289.1 CDS CFPG_615 NC_011565.1 893742 895718 R glucosamine-6-phosphate deaminase complement(893742..895718) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039780 YP_002309290.1 CDS CFPG_616 NC_011565.1 895828 896748 R N-carbamoylputrescine amidase complement(895828..896748) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039889 YP_002309291.1 CDS CFPG_617 NC_011565.1 896745 897767 R agmatine deiminase complement(896745..897767) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039884 YP_002309292.1 CDS CFPG_618 NC_011565.1 897978 898859 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 897978..898859 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039985 YP_002309293.1 CDS CFPG_619 NC_011565.1 898856 901687 D excinuclease ABC subunit A 898856..901687 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039984 YP_002309294.1 CDS CFPG_620 NC_011565.1 901800 903026 R GTP-binding protein HflX complement(901800..903026) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039911 YP_002309295.1 CDS CFPG_621 NC_011565.1 903152 904768 D amino acid transporter 903152..904768 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039815 YP_002309296.1 CDS CFPG_622 NC_011565.1 904828 905289 D methylated-DNA-[protein]-cysteine S-methyltransferase 904828..905289 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039899 YP_002309297.1 CDS CFPG_623 NC_011565.1 905326 907929 R ribonucleoside-diphosphate reductase subunit alpha complement(905326..907929) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039792 YP_002309298.1 CDS pgi NC_011565.1 907919 909280 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(907919..909280) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039905 YP_002309299.1 CDS CFPG_625 NC_011565.1 909297 910292 R NAD(P)-dependent glycerol-3-phosphate dehydrogenase complement(909297..910292) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039933 YP_002309300.1 CDS CFPG_626 NC_011565.1 910309 911811 R lysyl-tRNA synthetase complement(910309..911811) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039803 YP_002309301.1 CDS CFPG_627 NC_011565.1 911896 912996 R DNA replication and repair protein RecF complement(911896..912996) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039801 YP_002309302.1 CDS CFPG_628 NC_011565.1 913181 915172 D NAD-dependent DNA ligase 913181..915172 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039625 YP_002309303.1 CDS CFPG_629 NC_011565.1 915177 916592 R DNA polymerase III subunit gamma and tau complement(915177..916592) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039799 YP_002309304.1 CDS CFPG_630 NC_011565.1 916700 916918 D hypothetical protein 916700..916918 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039983 YP_002309305.1 CDS CFPG_631 NC_011565.1 917450 918262 R phosphomethylpyrimidine kinase complement(917450..918262) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039927 YP_002309306.1 CDS CFPG_632 NC_011565.1 918249 919964 R thiamine biosynthesis protein ThiC complement(918249..919964) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039305 YP_002309307.1 CDS leuS NC_011565.1 920286 923042 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(920286..923042) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039386 YP_002309308.1 CDS CFPG_634 NC_011565.1 923754 925211 D Fe-S cluster assembly protein SufB 923754..925211 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039971 YP_002309309.1 CDS CFPG_635 NC_011565.1 925214 925981 R 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(925214..925981) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039639 YP_002309310.1 CDS CFPG_636 NC_011565.1 926068 927459 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 926068..927459 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039167 YP_002309311.1 CDS CFPG_637 NC_011565.1 927541 929307 D phosphomannomutase 927541..929307 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039665 YP_002309312.1 CDS CFPG_638 NC_011565.1 929358 930110 D Fe-S cluster assembly protein SufC 929358..930110 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040022 YP_002309313.1 CDS CFPG_639 NC_011565.1 930094 931443 D Fe-S cluster assembly protein SufD 930094..931443 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039651 YP_002309314.1 CDS CFPG_640 NC_011565.1 931431 932669 D selenocysteine lyase/cysteine desulfurase 931431..932669 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039654 YP_002309315.1 CDS CFPG_641 NC_011565.1 932698 934446 D DNA mismatch repair protein MutL 932698..934446 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039647 YP_002309316.1 CDS CFPG_642 NC_011565.1 934443 935147 D phosphatidylserine synthase 934443..935147 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039660 YP_002309317.1 CDS CFPG_643 NC_011565.1 935182 937113 D cadmium efflux ATPase 935182..937113 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039388 YP_002309318.1 CDS CFPG_644 NC_011565.1 937200 938324 D DNA polymerase III subunit beta 937200..938324 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039843 YP_002309319.1 CDS CFPG_645 NC_011565.1 938321 939097 D DNA polymerase III epsilon subunit 938321..939097 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039617 YP_002309320.1 CDS CFPG_646 NC_011565.1 939113 940564 R hexuronate transporter complement(939113..940564) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039603 YP_002309321.1 CDS CFPG_647 NC_011565.1 940602 941234 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(940602..941234) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039572 YP_002309322.1 CDS CFPG_648 NC_011565.1 941304 942350 R 2-dehydro-3-deoxygluconokinase complement(941304..942350) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039571 YP_002309323.1 CDS CFPG_649 NC_011565.1 942460 943029 D hypothetical protein 942460..943029 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039558 YP_002309324.1 CDS smpB NC_011565.1 943040 943501 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 943040..943501 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039527 YP_002309325.1 CDS CFPG_651 NC_011565.1 943859 944317 R involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit complement(943859..944317) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039541 YP_002309326.1 CDS folE NC_011565.1 944601 945179 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(944601..945179) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039513 YP_002309327.1 CDS CFPG_653 NC_011565.1 945687 946115 R hypothetical protein complement(945687..946115) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039540 YP_002309328.1 CDS tpiA NC_011565.1 946137 946892 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(946137..946892) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039550 YP_002309329.1 CDS CFPG_655 NC_011565.1 946908 947972 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(946908..947972) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039580 YP_002309330.1 CDS CFPG_656 NC_011565.1 948022 949197 R aminotransferase B complement(948022..949197) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039607 YP_002309331.1 CDS thrA NC_011565.1 949699 952146 D multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 949699..952146 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039498 YP_002309332.1 CDS CFPG_658 NC_011565.1 952292 953500 D catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 952292..953500 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039466 YP_002309333.1 CDS CFPG_659 NC_011565.1 953603 954916 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 953603..954916 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039476 YP_002309334.1 CDS CFPG_660 NC_011565.1 956168 957601 D molybdenum ABC transporter ATP-binding protein 956168..957601 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039457 YP_002309335.1 CDS CFPG_661 NC_011565.1 957644 960208 R glycogen phosphorylase complement(957644..960208) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039459 YP_002309336.1 CDS CFPG_662 NC_011565.1 960235 961890 R glycogen synthase complement(960235..961890) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039421 YP_002309337.1 CDS CFPG_663 NC_011565.1 961995 962783 D amidohydrolase 961995..962783 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039460 YP_002309338.1 CDS CFPG_664 NC_011565.1 962919 964817 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(962919..964817) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039404 YP_002309339.1 CDS CFPG_665 NC_011565.1 965070 966494 R tRNA nucleotidyltransferase complement(965070..966494) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039437 YP_002309340.1 CDS CFPG_666 NC_011565.1 967105 967725 D 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 967105..967725 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039396 YP_002309341.1 CDS CFPG_667 NC_011565.1 967758 968261 D 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 967758..968261 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039439 YP_002309342.1 CDS CFPG_668 NC_011565.1 969198 970070 D electron transfer flavoprotein subunit beta 969198..970070 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040016 YP_002309343.1 CDS CFPG_669 NC_011565.1 970074 971093 D electron transfer flavoprotein alpha subunit 970074..971093 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039211 YP_002309344.1 CDS CFPG_670 NC_011565.1 971233 972942 D acyl-CoA dehydrogenase 971233..972942 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040013 YP_002309345.1 CDS CFPG_671 NC_011565.1 974037 974441 R hypothetical protein complement(974037..974441) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039463 YP_002309346.1 CDS CFPG_672 NC_011565.1 976930 977331 R hypothetical protein complement(976930..977331) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039486 YP_002309347.1 CDS CFPG_673 NC_011565.1 980212 980835 D serine site-specific recombinase 980212..980835 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039390 YP_002309348.1 CDS CFPG_674 NC_011565.1 980900 981250 R hypothetical protein complement(980900..981250) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039384 YP_002309349.1 CDS CFPG_675 NC_011565.1 981597 982115 R hypothetical protein complement(981597..982115) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039353 YP_002309350.1 CDS CFPG_676 NC_011565.1 984084 984320 R hypothetical protein complement(984084..984320) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039268 YP_002309351.1 CDS CFPG_677 NC_011565.1 988221 988760 D hypothetical protein 988221..988760 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039312 YP_002309352.1 CDS CFPG_678 NC_011565.1 989268 989663 D hypothetical protein 989268..989663 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039243 YP_002309353.1 CDS CFPG_679 NC_011565.1 991861 992181 D hypothetical protein 991861..992181 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039304 YP_002309354.1 CDS CFPG_680 NC_011565.1 992545 992847 R hypothetical protein complement(992545..992847) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039255 YP_002309355.1 CDS CFPG_681 NC_011565.1 993563 993883 R hypothetical protein complement(993563..993883) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039230 YP_002309356.1 CDS CFPG_682 NC_011565.1 998634 998978 D hypothetical protein 998634..998978 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039244 YP_002309357.1 CDS CFPG_683 NC_011565.1 999630 999935 R hypothetical protein complement(999630..999935) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039257 YP_002309358.1 CDS CFPG_684 NC_011565.1 1001591 1001959 R hypothetical protein complement(1001591..1001959) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039282 YP_002309359.1 CDS CFPG_685 NC_011565.1 1006863 1007486 D serine site-specific recombinase 1006863..1007486 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039354 YP_002309360.1 CDS CFPG_686 NC_011565.1 1007596 1007934 R hypothetical protein complement(1007596..1007934) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039239 YP_002309361.1 CDS CFPG_687 NC_011565.1 1008237 1008689 R hypothetical protein complement(1008237..1008689) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039232 YP_002309362.1 CDS CFPG_688 NC_011565.1 1008737 1009048 R hypothetical protein complement(1008737..1009048) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040007 YP_002309363.1 CDS CFPG_689 NC_011565.1 1009368 1009790 R hypothetical protein complement(1009368..1009790) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039196 YP_002309364.1 CDS CFPG_690 NC_011565.1 1014066 1014602 R hypothetical protein complement(1014066..1014602) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039198 YP_002309365.1 CDS CFPG_691 NC_011565.1 1014652 1015011 D hypothetical protein 1014652..1015011 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039186 YP_002309366.1 CDS CFPG_692 NC_011565.1 1015060 1016088 R hypothetical protein complement(1015060..1016088) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039210 YP_002309367.1 CDS CFPG_693 NC_011565.1 1017542 1018162 R N-acetylmuramoyl-L-alanine amidase complement(1017542..1018162) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039175 YP_002309368.1 CDS CFPG_694 NC_011565.1 1018805 1019149 D hypothetical protein 1018805..1019149 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039158 YP_002309369.1 CDS CFPG_695 NC_011565.1 1022699 1023034 D hypothetical protein 1022699..1023034 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039161 YP_002309370.1 CDS CFPG_696 NC_011565.1 1023849 1024478 D hypothetical protein 1023849..1024478 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039185 YP_002309371.1 CDS CFPG_697 NC_011565.1 1026223 1026777 D hypothetical protein 1026223..1026777 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039229 YP_002309372.1 CDS CFPG_698 NC_011565.1 1027372 1027749 D CrcB-like protein 1027372..1027749 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039209 YP_002309373.1 CDS CFPG_699 NC_011565.1 1028096 1030111 R hypothetical protein complement(1028096..1030111) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039159 YP_002309374.1 CDS CFPG_700 NC_011565.1 1031094 1031402 D hypothetical protein 1031094..1031402 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039147 YP_002309375.1 CDS CFPG_701 NC_011565.1 1031567 1031866 D hypothetical protein 1031567..1031866 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039142 YP_002309376.1 CDS CFPG_702 NC_011565.1 1031879 1032229 D hypothetical protein 1031879..1032229 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040024 YP_002309377.1 CDS CFPG_703 NC_011565.1 1033104 1034276 R M23 family peptidase complement(1033104..1034276) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039216 YP_002309378.1 CDS CFPG_704 NC_011565.1 1034500 1035006 R hypothetical protein complement(1034500..1035006) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039190 YP_002309379.1 CDS CFPG_705 NC_011565.1 1036777 1037220 R hypothetical protein complement(1036777..1037220) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039195 YP_002309380.1 CDS CFPG_706 NC_011565.1 1040510 1041538 D hypothetical protein 1040510..1041538 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040020 YP_002309381.1 CDS CFPG_707 NC_011565.1 1041587 1041946 R hypothetical protein complement(1041587..1041946) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039213 YP_002309382.1 CDS CFPG_708 NC_011565.1 1042286 1042696 R hypothetical protein complement(1042286..1042696) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039181 YP_002309383.1 CDS CFPG_709 NC_011565.1 1043032 1045872 D hypothetical protein 1043032..1045872 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039183 YP_002309384.1 CDS murC NC_011565.1 1045919 1047319 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(1045919..1047319) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039177 YP_002309385.1 CDS murG NC_011565.1 1047300 1048394 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(1047300..1048394) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039189 YP_002309386.1 CDS CFPG_712 NC_011565.1 1048622 1049398 D thiamine biosynthesis protein ThiG 1048622..1049398 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040030 YP_002309387.1 CDS CFPG_713 NC_011565.1 1050074 1051183 D thiamine biosynthesis protein ThiH 1050074..1051183 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039165 YP_002309388.1 CDS CFPG_714 NC_011565.1 1051180 1051812 D thiamine-phosphate pyrophosphorylase 1051180..1051812 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039155 YP_002309389.1 CDS CFPG_715 NC_011565.1 1051799 1052002 D thiamine biosynthesis protein ThiS 1051799..1052002 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039170 YP_002309390.1 CDS CFPG_716 NC_011565.1 1052220 1053155 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1052220..1053155 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040019 YP_002309391.1 CDS CFPG_717 NC_011565.1 1053218 1053715 D 30S ribosomal protein S16 1053218..1053715 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040012 YP_002309392.1 CDS CFPG_718 NC_011565.1 1054414 1055484 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1054414..1055484 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040011 YP_002309393.1 CDS proA NC_011565.1 1055500 1056759 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1055500..1056759 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039193 YP_002309394.1 CDS dapF NC_011565.1 1057182 1058009 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(1057182..1058009) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040025 YP_002309395.1 CDS CFPG_721 NC_011565.1 1058033 1058905 R malonyl CoA-acyl carrier protein transacylase complement(1058033..1058905) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039955 YP_002309396.1 CDS CFPG_722 NC_011565.1 1059391 1060401 R glycosyltransferase complement(1059391..1060401) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039790 YP_002309397.1 CDS CFPG_723 NC_011565.1 1060448 1061749 R Fe-S oxidoreductase complement(1060448..1061749) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040006 YP_002309398.1 CDS CFPG_724 NC_011565.1 1061988 1062440 D D-tyrosyl-tRNA deacylase 1061988..1062440 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040009 YP_002309399.1 CDS CFPG_725 NC_011565.1 1062447 1063379 R hypothetical protein complement(1062447..1063379) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040005 YP_002309400.1 CDS CFPG_726 NC_011565.1 1063385 1064662 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1063385..1064662) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039966 YP_002309401.1 CDS CFPG_727 NC_011565.1 1064703 1065479 R acetylglutamate kinase complement(1064703..1065479) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039270 YP_002309402.1 CDS CFPG_728 NC_011565.1 1065541 1067550 R dipeptidyl-peptidase III complement(1065541..1067550) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039272 YP_002309403.1 CDS CFPG_729 NC_011565.1 1067807 1069081 D O-acetylhomoserine (thiol)-lyase/cysteine synthase 1067807..1069081 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039240 YP_002309404.1 CDS CFPG_730 NC_011565.1 1069333 1069542 R hypothetical protein complement(1069333..1069542) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039283 YP_002309405.1 CDS CFPG_731 NC_011565.1 1069678 1072143 R DNA gyrase subunit A complement(1069678..1072143) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039969 YP_002309406.1 CDS hisS NC_011565.1 1072788 1074164 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1072788..1074164 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039145 YP_002309407.1 CDS CFPG_733 NC_011565.1 1074451 1076238 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1074451..1076238 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040010 YP_002309408.1 CDS CFPG_734 NC_011565.1 1076241 1077269 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1076241..1077269 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039590 YP_002309409.1 CDS CFPG_735 NC_011565.1 1077271 1078512 D Ste24-like endopeptidase 1077271..1078512 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039256 YP_002309410.1 CDS CFPG_736 NC_011565.1 1078551 1079366 R glycogen synthase-related protein complement(1078551..1079366) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039252 YP_002309411.1 CDS panC NC_011565.1 1079506 1080348 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1079506..1080348 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039808 YP_002309412.1 CDS mraY NC_011565.1 1082568 1083824 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1082568..1083824) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039993 YP_002309413.1 CDS murE NC_011565.1 1083835 1085250 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(1083835..1085250) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039990 YP_002309414.1 CDS CFPG_740 NC_011565.1 1085255 1087402 R peptidoglycan synthetase FtsI-like protein complement(1085255..1087402) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039932 YP_002309415.1 CDS CFPG_741 NC_011565.1 1087854 1088201 R hypothetical protein complement(1087854..1088201) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039902 YP_002309416.1 CDS mraW NC_011565.1 1088198 1089112 R S-adenosyl-methyltransferase MraW complement(1088198..1089112) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039373 YP_002309417.1 CDS CFPG_743 NC_011565.1 1089280 1090197 D D-3-phosphoglycerate dehydrogenase 1089280..1090197 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039334 YP_002309418.1 CDS CFPG_744 NC_011565.1 1095135 1096277 R carboxynorspermidine decarboxylase complement(1095135..1096277) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039661 YP_002309419.1 CDS CFPG_745 NC_011565.1 1096284 1097102 R 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(1096284..1097102) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039329 YP_002309420.1 CDS CFPG_746 NC_011565.1 1097135 1098061 R protease complement(1097135..1098061) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039366 YP_002309421.1 CDS CFPG_747 NC_011565.1 1098027 1098731 R hypothetical protein complement(1098027..1098731) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039351 YP_002309422.1 CDS engB NC_011565.1 1098911 1099540 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(1098911..1099540) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039356 YP_002309423.1 CDS rpmF NC_011565.1 1099987 1100184 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1099987..1100184 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039338 YP_002309424.1 CDS CFPG_750 NC_011565.1 1100276 1101277 D 3-oxoacyl-ACP synthase 1100276..1101277 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039328 YP_002309425.1 CDS CFPG_751 NC_011565.1 1103218 1104498 R 3-phosphoshikimate 1-carboxyvinyltransferase complement(1103218..1104498) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039861 YP_002309426.1 CDS glyA NC_011565.1 1105858 1107138 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1105858..1107138 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039251 YP_002309427.1 CDS pyrH NC_011565.1 1107154 1107861 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1107154..1107861 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039378 YP_002309428.1 CDS frr NC_011565.1 1107923 1108477 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1107923..1108477 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039640 YP_002309429.1 CDS CFPG_755 NC_011565.1 1109130 1109351 D hypothetical protein 1109130..1109351 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039337 YP_002309430.1 CDS CFPG_756 NC_011565.1 1109358 1110833 R IMP dehydrogenase complement(1109358..1110833) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039335 YP_002309431.1 CDS CFPG_757 NC_011565.1 1111065 1111745 D M22 family peptidase 1111065..1111745 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039316 YP_002309432.1 CDS aspS NC_011565.1 1111766 1113517 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1111766..1113517) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039309 CFPG_tRNA1 tRNA CFPG_tRNA1 NC_011565.1 18362 18437 R tRNA-Trp complement(18362..18437) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039906 CFPG_tRNA2 tRNA CFPG_tRNA2 NC_011565.1 19782 19856 R tRNA-Thr complement(19782..19856) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039897 CFPG_tRNA3 tRNA CFPG_tRNA3 NC_011565.1 55326 55402 D tRNA-Arg 55326..55402 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039946 CFPG_tRNA4 tRNA CFPG_tRNA4 NC_011565.1 63443 63516 D tRNA-Ile 63443..63516 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039904 CFPG_tRNA5 tRNA CFPG_tRNA5 NC_011565.1 64751 64825 R tRNA-Glu complement(64751..64825) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039851 CFPG_tRNA6 tRNA CFPG_tRNA6 NC_011565.1 65718 65789 D tRNA-Arg 65718..65789 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039809 CFPG_tRNA7 tRNA CFPG_tRNA7 NC_011565.1 176040 176110 D tRNA-Cys 176040..176110 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039878 CFPG_tRNA8 tRNA CFPG_tRNA8 NC_011565.1 193232 193318 D tRNA-Ser 193232..193318 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040001 CFPG_tRNA9 tRNA CFPG_tRNA9 NC_011565.1 264821 264894 D tRNA-Gln 264821..264894 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039864 CFPG_tRNA10 tRNA CFPG_tRNA10 NC_011565.1 269183 269258 R tRNA-Phe complement(269183..269258) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039855 CFPG_tRNA11 tRNA CFPG_tRNA11 NC_011565.1 270183 270258 R tRNA-Pro complement(270183..270258) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039253 CFPG_tRNA12 tRNA CFPG_tRNA12 NC_011565.1 358390 358467 D tRNA-Pro 358390..358467 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039452 CFPG_tRNA13 tRNA CFPG_tRNA13 NC_011565.1 362103 362176 R tRNA-Met complement(362103..362176) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039533 CFPG_tRNA14 tRNA CFPG_tRNA14 NC_011565.1 423579 423662 R tRNA-Leu complement(423579..423662) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039266 CFPG_tRNA15 tRNA CFPG_tRNA15 NC_011565.1 456800 456875 D tRNA-Lys 456800..456875 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040031 CFPG_tRNA16 tRNA CFPG_tRNA16 NC_011565.1 483184 483258 D tRNA-Gly 483184..483258 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039173 CFPG_tRNA17 tRNA CFPG_tRNA17 NC_011565.1 504935 505010 D tRNA-Thr 504935..505010 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039894 CFPG_tRNA18 tRNA CFPG_tRNA18 NC_011565.1 508163 508236 D tRNA-Met 508163..508236 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039261 CFPG_tRNA19 tRNA CFPG_tRNA19 NC_011565.1 513253 513330 R tRNA-Val complement(513253..513330) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039274 CFPG_tRNA20 tRNA CFPG_tRNA20 NC_011565.1 518877 518954 D tRNA-Asn 518877..518954 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039235 CFPG_tRNA21 tRNA CFPG_tRNA21 NC_011565.1 533544 533619 D tRNA-Arg 533544..533619 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039361 CFPG_tRNA22 tRNA CFPG_tRNA22 NC_011565.1 595170 595243 D tRNA-Gln 595170..595243 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039573 CFPG_tRNA23 tRNA CFPG_tRNA23 NC_011565.1 601373 601460 D tRNA-Leu 601373..601460 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039543 CFPG_tRNA24 tRNA CFPG_tRNA24 NC_011565.1 623319 623394 R tRNA-Gly complement(623319..623394) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039657 CFPG_tRNA25 tRNA CFPG_tRNA25 NC_011565.1 623410 623492 R tRNA-Tyr complement(623410..623492) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039340 CFPG_tRNA26 tRNA CFPG_tRNA26 NC_011565.1 623510 623583 R tRNA-Thr complement(623510..623583) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039362 CFPG_tRNA27 tRNA CFPG_tRNA27 NC_011565.1 623842 623914 R tRNA-Gly complement(623842..623914) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039391 CFPG_tRNA28 tRNA CFPG_tRNA28 NC_011565.1 642818 642904 D tRNA-Leu 642818..642904 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7040029 CFPG_tRNA29 tRNA CFPG_tRNA29 NC_011565.1 663793 663868 R tRNA-Lys complement(663793..663868) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039223 CFPG_tRNA30 tRNA CFPG_tRNA30 NC_011565.1 699011 699087 D tRNA-Arg 699011..699087 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039345 CFPG_tRNA31 tRNA CFPG_tRNA31 NC_011565.1 703657 703744 D tRNA-Ser 703657..703744 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039413 CFPG_tRNA32 tRNA CFPG_tRNA32 NC_011565.1 707093 707165 D tRNA-Met 707093..707165 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039330 CFPG_tRNA33 tRNA CFPG_tRNA33 NC_011565.1 729015 729099 R tRNA-Leu complement(729015..729099) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039490 CFPG_tRNA34 tRNA CFPG_tRNA34 NC_011565.1 804774 804851 D tRNA-Asp 804774..804851 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039446 CFPG_tRNA35 tRNA CFPG_tRNA35 NC_011565.1 836164 836237 D tRNA-His 836164..836237 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039818 CFPG_tRNA36 tRNA CFPG_tRNA36 NC_011565.1 1093044 1093120 R tRNA-Ala complement(1093044..1093120) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039308 CFPG_tRNA37 tRNA CFPG_tRNA37 NC_011565.1 1093131 1093204 R tRNA-Ile complement(1093131..1093204) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039563 CFPG_tRNA38 tRNA CFPG_tRNA38 NC_011565.1 1101428 1101515 D tRNA-Ser 1101428..1101515 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039377 CFPG_16SrRNA01 rRNA CFPG_16SrRNA01 NC_011565.1 61786 63306 D 16S ribosomal RNA 61786..63306 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039898 CFPG_5SrRNA01 rRNA CFPG_5SrRNA01 NC_011565.1 196481 196590 D 5S ribosomal RNA 196481..196590 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039949 CFPG_23SrRNA01 rRNA CFPG_23SrRNA01 NC_011565.1 196681 199575 R 23S ribosomal RNA complement(196681..199575) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039929 CFPG_16SrRNA02 rRNA CFPG_16SrRNA02 NC_011565.1 1093341 1094861 R 16S ribosomal RNA complement(1093341..1094861) Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 7039583