-- dump date 20140619_022433 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002308581.1 212550260 7039679 1..1599 1 NC_011561.1 replication protein A 1599 7039679 CFPG_P2-1 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replication protein A YP_002308581.1 1 D 511995 CDS YP_002308582.1 212550261 7039670 1657..2055 1 NC_011561.1 hypothetical protein 2055 7039670 CFPG_P2-2 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308582.1 1657 D 511995 CDS YP_002308583.1 212550262 7039672 2045..3214 1 NC_011561.1 hypothetical protein 3214 7039672 CFPG_P2-3 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308583.1 2045 D 511995 CDS YP_002308584.1 212550263 7039669 3221..3976 1 NC_011561.1 hypothetical protein 3976 7039669 CFPG_P2-4 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308584.1 3221 D 511995 CDS YP_002308585.1 212550264 7039676 4051..4446 1 NC_011561.1 hypothetical protein 4446 7039676 CFPG_P2-5 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308585.1 4051 D 511995 CDS YP_002308586.1 212550265 7039675 complement(4683..5645) 1 NC_011561.1 hypothetical protein 5645 7039675 CFPG_P2-6 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308586.1 4683 R 511995 CDS YP_002308587.1 212550266 7039677 complement(5664..7208) 1 NC_011561.1 hypothetical protein 7208 7039677 CFPG_P2-7 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308587.1 5664 R 511995 CDS YP_002308588.1 212550267 7039678 7493..8050 1 NC_011561.1 hypothetical protein 8050 7039678 CFPG_P2-8 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308588.1 7493 D 511995 CDS YP_002308589.1 212550268 7039686 complement(8098..10785) 1 NC_011561.1 hypothetical protein 10785 7039686 CFPG_P2-9 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308589.1 8098 R 511995 CDS YP_002308590.1 212550269 7039685 complement(11119..11895) 1 NC_011561.1 hypothetical protein 11895 7039685 CFPG_P2-10 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308590.1 11119 R 511995 CDS YP_002308591.1 212550270 7039683 13479..14165 1 NC_011561.1 hypothetical protein 14165 7039683 CFPG_P2-11 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308591.1 13479 D 511995 CDS YP_002308592.1 212550271 7039680 14240..14590 1 NC_011561.1 hypothetical protein 14590 7039680 CFPG_P2-12 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308592.1 14240 D 511995 CDS YP_002308593.1 212550272 7039684 complement(15255..15911) 1 NC_011561.1 hypothetical protein 15911 7039684 CFPG_P2-13 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308593.1 15255 R 511995 CDS YP_002308594.1 212550273 7039681 complement(16064..18391) 1 NC_011561.1 hypothetical protein 18391 7039681 CFPG_P2-14 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308594.1 16064 R 511995 CDS YP_002308595.1 212550274 7039694 18439..18795 1 NC_011561.1 hypothetical protein 18795 7039694 CFPG_P2-15 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308595.1 18439 D 511995 CDS YP_002308596.1 212550275 7039693 complement(20155..20601) 1 NC_011561.1 hypothetical protein 20601 7039693 CFPG_P2-16 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308596.1 20155 R 511995 CDS YP_002308597.1 212550276 7039692 complement(20623..21237) 1 NC_011561.1 putative N-acetylmuramoyl-L-alanine amidase 21237 7039692 CFPG_P2-17 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 putative N-acetylmuramoyl-L-alanine amidase YP_002308597.1 20623 R 511995 CDS YP_002308598.1 212550277 7039695 complement(23395..23868) 1 NC_011561.1 hypothetical protein 23868 7039695 CFPG_P2-18 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308598.1 23395 R 511995 CDS YP_002308599.1 212550278 7039691 complement(24743..25198) 1 NC_011561.1 hypothetical protein 25198 7039691 CFPG_P2-19 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308599.1 24743 R 511995 CDS YP_002308600.1 212550279 7039690 complement(25768..26424) 1 NC_011561.1 hypothetical protein 26424 7039690 CFPG_P2-20 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308600.1 25768 R 511995 CDS YP_002308601.1 212550280 7039682 26702..27052 1 NC_011561.1 hypothetical protein 27052 7039682 CFPG_P2-21 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308601.1 26702 D 511995 CDS YP_002308602.1 212550281 7039688 27218..27640 1 NC_011561.1 hypothetical protein 27640 7039688 CFPG_P2-22 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308602.1 27218 D 511995 CDS YP_002308603.1 212550282 7039687 27618..28805 1 NC_011561.1 hypothetical protein 28805 7039687 CFPG_P2-23 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308603.1 27618 D 511995 CDS YP_002308604.1 212550283 7039689 30304..30927 1 NC_011561.1 serine site-specific recombinase 30927 7039689 CFPG_P2-24 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 serine site-specific recombinase YP_002308604.1 30304 D 511995 CDS YP_002308605.1 212550284 7039668 complement(31036..31374) 1 NC_011561.1 hypothetical protein 31374 7039668 CFPG_P2-25 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308605.1 31036 R 511995 CDS YP_002308606.1 212550285 7039673 complement(31784..32413) 1 NC_011561.1 hypothetical protein 32413 7039673 CFPG_P2-26 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308606.1 31784 R 511995 CDS YP_002308607.1 212550286 7039671 complement(32576..32998) 1 NC_011561.1 hypothetical protein 32998 7039671 CFPG_P2-27 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308607.1 32576 R 511995 CDS YP_002308608.1 212550287 7039674 35550..36536 1 NC_011561.1 replication protein A 36536 7039674 CFPG_P2-28 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replication protein A YP_002308608.1 35550 D 511995 CDS YP_002308609.1 212550289 7039714 1..1593 1 NC_011562.1 replication protein A 1593 7039714 CFPG_P3-1 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replication protein A YP_002308609.1 1 D 511995 CDS YP_002308610.1 212550290 7039709 2031..2567 1 NC_011562.1 hypothetical protein 2567 7039709 CFPG_P3-2 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308610.1 2031 D 511995 CDS YP_002308611.1 212550291 7039717 2811..3149 1 NC_011562.1 hypothetical protein 3149 7039717 CFPG_P3-3 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308611.1 2811 D 511995 CDS YP_002308612.1 212550292 7039713 complement(3196..5298) 1 NC_011562.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 5298 7039713 CFPG_P3-4 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent DNA helicase RecG YP_002308612.1 3196 R 511995 CDS YP_002308613.1 212550293 7039698 complement(5336..6268) 1 NC_011562.1 hypothetical protein 6268 7039698 CFPG_P3-5 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308613.1 5336 R 511995 CDS YP_002308614.1 212550294 7039701 complement(6441..6716) 1 NC_011562.1 hypothetical protein 6716 7039701 CFPG_P3-6 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308614.1 6441 R 511995 CDS YP_002308615.1 212550295 7039700 complement(6713..7468) 1 NC_011562.1 ParA family ATPase 7468 7039700 CFPG_P3-7 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ParA family ATPase YP_002308615.1 6713 R 511995 CDS YP_002308616.1 212550296 7039697 complement(7837..9228) 1 NC_011562.1 replicative DNA helicase DnaB 9228 7039697 CFPG_P3-8 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replicative DNA helicase DnaB YP_002308616.1 7837 R 511995 CDS YP_002308617.1 212550297 7039702 complement(9243..10562) 1 NC_011562.1 replication protein A 10562 7039702 CFPG_P3-9 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replication protein A YP_002308617.1 9243 R 511995 CDS YP_002308618.1 212550298 7039707 12978..13805 1 NC_011562.1 hypothetical protein 13805 7039707 CFPG_P3-10 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308618.1 12978 D 511995 CDS YP_002308619.1 212550299 7039715 14941..15246 1 NC_011562.1 hypothetical protein 15246 7039715 CFPG_P3-11 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308619.1 14941 D 511995 CDS YP_002308620.1 212550300 7039703 16121..16873 1 NC_011562.1 hypothetical protein 16873 7039703 CFPG_P3-12 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308620.1 16121 D 511995 CDS YP_002308621.1 212550301 7039712 16937..17272 1 NC_011562.1 hypothetical protein 17272 7039712 CFPG_P3-13 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308621.1 16937 D 511995 CDS YP_002308622.1 212550302 7039704 complement(17695..18609) 1 NC_011562.1 hypothetical protein 18609 7039704 CFPG_P3-14 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308622.1 17695 R 511995 CDS YP_002308623.1 212550303 7039720 complement(18974..20350) 1 NC_011562.1 hypothetical protein 20350 7039720 CFPG_P3-15 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308623.1 18974 R 511995 CDS YP_002308624.1 212550304 7039710 complement(20414..21259) 1 NC_011562.1 M23 family peptidase 21259 7039710 CFPG_P3-16 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 M23 family peptidase YP_002308624.1 20414 R 511995 CDS YP_002308625.1 212550305 7039719 complement(21854..22267) 1 NC_011562.1 hypothetical protein 22267 7039719 CFPG_P3-17 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308625.1 21854 R 511995 CDS YP_002308626.1 212550306 7039711 complement(22588..23202) 1 NC_011562.1 putative N-acetylmuramoyl-L-alanine amidase 23202 7039711 CFPG_P3-18 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 putative N-acetylmuramoyl-L-alanine amidase YP_002308626.1 22588 R 511995 CDS YP_002308627.1 212550307 7039718 complement(23725..24048) 1 NC_011562.1 hypothetical protein 24048 7039718 CFPG_P3-19 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308627.1 23725 R 511995 CDS YP_002308628.1 212550308 7039716 complement(25204..25662) 1 NC_011562.1 hypothetical protein 25662 7039716 CFPG_P3-20 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308628.1 25204 R 511995 CDS YP_002308629.1 212550309 7039705 26729..27352 1 NC_011562.1 serine site-specific recombinase 27352 7039705 CFPG_P3-21 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 serine site-specific recombinase YP_002308629.1 26729 D 511995 CDS YP_002308630.1 212550310 7039708 complement(27461..27775) 1 NC_011562.1 hypothetical protein 27775 7039708 CFPG_P3-22 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308630.1 27461 R 511995 CDS YP_002308631.1 212550311 7039696 complement(28113..29051) 1 NC_011562.1 hypothetical protein 29051 7039696 CFPG_P3-23 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308631.1 28113 R 511995 CDS YP_002308632.1 212550312 7039706 complement(29076..29354) 1 NC_011562.1 putative plasmid-encoded toxin Txe/YoeB 29354 7039706 CFPG_P3-24 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 putative plasmid-encoded toxin Txe/YoeB YP_002308632.1 29076 R 511995 CDS YP_002308633.1 212550313 7039699 complement(29656..30075) 1 NC_011562.1 hypothetical protein 30075 7039699 CFPG_P3-25 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308633.1 29656 R 511995 CDS YP_002308634.1 212550315 7039724 1..1122 1 NC_011563.1 replication protein A 1122 7039724 CFPG_P4-1 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replication protein A YP_002308634.1 1 D 511995 CDS YP_002308635.1 212550316 7039721 complement(1152..1565) 1 NC_011563.1 hypothetical protein 1565 7039721 CFPG_P4-2 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308635.1 1152 R 511995 CDS YP_002308636.1 212550317 7039722 1763..3040 1 NC_011563.1 mobilization protein MobA 3040 7039722 CFPG_P4-3 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 mobilization protein MobA YP_002308636.1 1763 D 511995 CDS YP_002308637.1 212550318 7039723 3623..3931 1 NC_011563.1 hypothetical protein 3931 7039723 CFPG_P4-4 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308637.1 3623 D 511995 CDS YP_002308638.1 212550320 7039760 1..1599 1 NC_011564.1 replication protein A 1599 7039760 CFPG_P1-1 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replication protein A YP_002308638.1 1 D 511995 CDS YP_002308639.1 212550321 7039741 1657..2058 1 NC_011564.1 hypothetical protein 2058 7039741 CFPG_P1-2 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308639.1 1657 D 511995 CDS YP_002308640.1 212550322 7039727 2048..3118 1 NC_011564.1 hypothetical protein 3118 7039727 CFPG_P1-3 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308640.1 2048 D 511995 CDS YP_002308641.1 212550323 7039753 3125..3925 1 NC_011564.1 hypothetical protein 3925 7039753 CFPG_P1-4 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308641.1 3125 D 511995 CDS YP_002308642.1 212550324 7039747 4643..4951 1 NC_011564.1 hypothetical protein 4951 7039747 CFPG_P1-5 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308642.1 4643 D 511995 CDS YP_002308643.1 212550325 7039748 5002..5304 1 NC_011564.1 hypothetical protein 5304 7039748 CFPG_P1-6 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308643.1 5002 D 511995 CDS YP_002308644.1 212550326 7039751 5673..7268 1 NC_011564.1 replication protein A 7268 7039751 CFPG_P1-7 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replication protein A YP_002308644.1 5673 D 511995 CDS YP_002308645.1 212550327 7039750 7394..8614 1 NC_011564.1 DNA modification methylase 8614 7039750 CFPG_P1-8 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA modification methylase YP_002308645.1 7394 D 511995 CDS YP_002308646.1 212550328 7039728 9342..9710 1 NC_011564.1 hypothetical protein 9710 7039728 CFPG_P1-9 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308646.1 9342 D 511995 CDS YP_002308647.1 212550329 7039731 complement(9960..10352) 1 NC_011564.1 hypothetical protein 10352 7039731 CFPG_P1-10 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308647.1 9960 R 511995 CDS YP_002308648.1 212550330 7039742 complement(10379..10666) 1 NC_011564.1 hypothetical protein 10666 7039742 CFPG_P1-11 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308648.1 10379 R 511995 CDS YP_002308649.1 212550331 7039739 complement(10669..11082) 1 NC_011564.1 hypothetical protein 11082 7039739 CFPG_P1-12 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308649.1 10669 R 511995 CDS YP_002308650.1 212550332 7039736 11274..12104 1 NC_011564.1 hypothetical protein 12104 7039736 CFPG_P1-13 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308650.1 11274 D 511995 CDS YP_002308651.1 212550333 7039730 12270..12569 1 NC_011564.1 hypothetical protein 12569 7039730 CFPG_P1-14 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308651.1 12270 D 511995 CDS YP_002308652.1 212550334 7039735 12582..12923 1 NC_011564.1 hypothetical protein 12923 7039735 CFPG_P1-15 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308652.1 12582 D 511995 CDS YP_002308653.1 212550335 7039761 complement(13949..14116) 1 NC_011564.1 hypothetical protein 14116 7039761 CFPG_P1-16 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308653.1 13949 R 511995 CDS YP_002308654.1 212550336 7039734 complement(16581..17210) 1 NC_011564.1 hypothetical protein 17210 7039734 CFPG_P1-17 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308654.1 16581 R 511995 CDS YP_002308655.1 212550337 7039737 complement(17365..19698) 1 NC_011564.1 hypothetical protein 19698 7039737 CFPG_P1-18 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308655.1 17365 R 511995 CDS YP_002308656.1 212550338 7039733 19748..20104 1 NC_011564.1 hypothetical protein 20104 7039733 CFPG_P1-19 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308656.1 19748 D 511995 CDS YP_002308657.1 212550339 7039726 complement(20589..20900) 1 NC_011564.1 hypothetical protein 20900 7039726 CFPG_P1-20 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308657.1 20589 R 511995 CDS YP_002308658.1 212550340 7039745 complement(21481..21882) 1 NC_011564.1 hypothetical protein 21882 7039745 CFPG_P1-21 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308658.1 21481 R 511995 CDS YP_002308659.1 212550341 7039732 complement(23107..23445) 1 NC_011564.1 hypothetical protein 23445 7039732 CFPG_P1-22 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308659.1 23107 R 511995 CDS YP_002308660.1 212550342 7039729 complement(23577..24020) 1 NC_011564.1 hypothetical protein 24020 7039729 CFPG_P1-23 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308660.1 23577 R 511995 CDS YP_002308661.1 212550343 7039746 complement(24039..24464) 1 NC_011564.1 hypothetical protein 24464 7039746 CFPG_P1-24 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308661.1 24039 R 511995 CDS YP_002308662.1 212550344 7039738 complement(24461..24919) 1 NC_011564.1 hypothetical protein 24919 7039738 CFPG_P1-25 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308662.1 24461 R 511995 CDS YP_002308663.1 212550345 7039744 complement(25251..25661) 1 NC_011564.1 hypothetical protein 25661 7039744 CFPG_P1-26 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308663.1 25251 R 511995 CDS YP_002308664.1 212550346 7039740 complement(25780..26124) 1 NC_011564.1 hypothetical protein 26124 7039740 CFPG_P1-27 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308664.1 25780 R 511995 CDS YP_002308665.1 212550347 7039743 complement(26131..26592) 1 NC_011564.1 hypothetical protein 26592 7039743 CFPG_P1-28 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308665.1 26131 R 511995 CDS YP_002308666.1 212550348 7039725 27320..27655 1 NC_011564.1 hypothetical protein 27655 7039725 CFPG_P1-29 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308666.1 27320 D 511995 CDS YP_002308667.1 212550349 7039755 27818..28231 1 NC_011564.1 hypothetical protein 28231 7039755 CFPG_P1-30 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308667.1 27818 D 511995 CDS YP_002308668.1 212550350 7039756 28218..29405 1 NC_011564.1 hypothetical protein 29405 7039756 CFPG_P1-31 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308668.1 28218 D 511995 CDS YP_002308669.1 212550351 7039754 30849..31472 1 NC_011564.1 serine site-specific recombinase 31472 7039754 CFPG_P1-32 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 serine site-specific recombinase YP_002308669.1 30849 D 511995 CDS YP_002308670.1 212550352 7039749 complement(31537..31884) 1 NC_011564.1 hypothetical protein 31884 7039749 CFPG_P1-33 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308670.1 31537 R 511995 CDS YP_002308671.1 212550353 7039759 complement(32188..32742) 1 NC_011564.1 hypothetical protein 32742 7039759 CFPG_P1-34 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308671.1 32188 R 511995 CDS YP_002308672.1 212550354 7039757 complement(33518..33940) 1 NC_011564.1 hypothetical protein 33940 7039757 CFPG_P1-35 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308672.1 33518 R 511995 CDS YP_002308673.1 212550355 7039752 complement(35417..35755) 1 NC_011564.1 hypothetical protein 35755 7039752 CFPG_P1-36 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308673.1 35417 R 511995 CDS YP_002308674.1 212550356 7039758 36109..37053 1 NC_011564.1 replication protein A 37053 7039758 CFPG_P1-37 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replication protein A YP_002308674.1 36109 D 511995 CDS YP_002308675.1 212550358 7039825 1..1368 1 NC_011565.1 chromosomal replication initiation protein DnaA 1368 7039825 CFPG_001 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 chromosomal replication initiation protein DnaA YP_002308675.1 1 D 511995 CDS YP_002308676.1 212550359 7039979 1711..3489 1 NC_011565.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3489 argS 7039979 argS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 arginyl-tRNA synthetase YP_002308676.1 1711 D 511995 CDS YP_002308677.1 212550360 7039896 complement(3518..5269) 1 NC_011565.1 transcription termination factor Rho 5269 7039896 CFPG_003 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transcription termination factor Rho YP_002308677.1 3518 R 511995 CDS YP_002308678.1 212550361 7039912 complement(5397..6740) 1 NC_011565.1 tRNA(Ile)-lysidine synthase 6740 7039912 CFPG_004 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA(Ile)-lysidine synthase YP_002308678.1 5397 R 511995 CDS YP_002308679.1 212550362 7039832 complement(6770..10987) 1 NC_011565.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 10987 7039832 CFPG_005 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA-directed RNA polymerase subunit beta' YP_002308679.1 6770 R 511995 CDS YP_002308680.1 212550363 7039794 complement(11073..14879) 1 NC_011565.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 14879 rpoB 7039794 rpoB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA-directed RNA polymerase subunit beta YP_002308680.1 11073 R 511995 CDS YP_002308681.1 212550364 7039849 complement(15061..15435) 1 NC_011565.1 50S ribosomal protein L7/L12 15435 7039849 CFPG_007 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L7/L12 YP_002308681.1 15061 R 511995 CDS YP_002308682.1 212550365 7039968 complement(15477..16022) 1 NC_011565.1 50S ribosomal protein L10 16022 7039968 CFPG_008 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L10 YP_002308682.1 15477 R 511995 CDS YP_002308683.1 212550366 7039919 complement(16034..16732) 1 NC_011565.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 16732 rplA 7039919 rplA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L1 YP_002308683.1 16034 R 511995 CDS YP_002308684.1 212550367 7039807 complement(16743..17195) 1 NC_011565.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 17195 rplK 7039807 rplK Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L11 YP_002308684.1 16743 R 511995 CDS YP_002308685.1 212550368 7039876 complement(17441..17974) 1 NC_011565.1 transcription antitermination protein NusG 17974 7039876 CFPG_011 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transcription antitermination protein NusG YP_002308685.1 17441 R 511995 CDS YP_002308686.1 212550369 7039987 complement(18099..18320) 1 NC_011565.1 preprotein translocase subunit SecE 18320 7039987 CFPG_012 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 preprotein translocase subunit SecE YP_002308686.1 18099 R 511995 CDS YP_002308687.1 212550370 7039455 complement(18521..19708) 1 NC_011565.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 19708 7039455 CFPG_013 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 elongation factor Tu YP_002308687.1 18521 R 511995 CDS YP_002308688.1 212550371 7039412 complement(20755..22107) 1 NC_011565.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 22107 7039412 CFPG_014 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydroorotase YP_002308688.1 20755 R 511995 CDS YP_002308689.1 212550372 7039934 complement(22107..22856) 1 NC_011565.1 dolichol-phosphate mannosyltransferase 22856 7039934 CFPG_015 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dolichol-phosphate mannosyltransferase YP_002308689.1 22107 R 511995 CDS YP_002308690.1 212550373 7039858 complement(22853..23974) 1 NC_011565.1 iron ABC transporter substrate-binding protein 23974 7039858 CFPG_016 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 iron ABC transporter substrate-binding protein YP_002308690.1 22853 R 511995 CDS YP_002308691.1 212550374 7039867 24641..24979 1 NC_011565.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 24979 rpsF 7039867 rpsF Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S6 YP_002308691.1 24641 D 511995 CDS YP_002308692.1 212550375 7039874 24994..25272 1 NC_011565.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 25272 rpsR 7039874 rpsR Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S18 YP_002308692.1 24994 D 511995 CDS YP_002308693.1 212550376 7039928 25294..25737 1 NC_011565.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 25737 rplI 7039928 rplI Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L9 YP_002308693.1 25294 D 511995 CDS YP_002308694.1 212550377 7039972 complement(26067..27473) 1 NC_011565.1 anthranilate synthase component I 27473 7039972 CFPG_020 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 anthranilate synthase component I YP_002308694.1 26067 R 511995 CDS YP_002308695.1 212550378 7039854 complement(27804..28055) 1 NC_011565.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 28055 rpmE2 7039854 rpmE2 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L31 YP_002308695.1 27804 R 511995 CDS YP_002308696.1 212550379 7039840 28197..28736 1 NC_011565.1 hypothetical protein 28736 7039840 CFPG_022 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308696.1 28197 D 511995 CDS YP_002308697.1 212550380 7039982 complement(28840..29577) 1 NC_011565.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 29577 7039982 CFPG_023 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 pantothenate kinase YP_002308697.1 28840 R 511995 CDS YP_002308698.1 212550381 7039923 29694..30947 1 NC_011565.1 hypothetical protein 30947 7039923 CFPG_024 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308698.1 29694 D 511995 CDS YP_002308699.1 212550382 7039837 31009..31941 1 NC_011565.1 riboflavin kinase/FMN adenylyltransferase 31941 7039837 CFPG_025 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 riboflavin kinase/FMN adenylyltransferase YP_002308699.1 31009 D 511995 CDS YP_002308700.1 212550383 7039814 complement(32259..34193) 1 NC_011565.1 DNA gyrase subunit B 34193 7039814 CFPG_026 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA gyrase subunit B YP_002308700.1 32259 R 511995 CDS YP_002308701.1 212550384 7039996 34457..34624 1 NC_011565.1 ferredoxin 34624 7039996 CFPG_027 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ferredoxin YP_002308701.1 34457 D 511995 CDS YP_002308702.1 212550385 7039920 35571..37088 1 NC_011565.1 hypothetical protein 37088 7039920 CFPG_028 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308702.1 35571 D 511995 CDS YP_002308703.1 212550386 7039785 complement(37065..37955) 1 NC_011565.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 37955 7039785 CFPG_029 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydrodipicolinate synthase YP_002308703.1 37065 R 511995 CDS YP_002308704.1 212550387 7039915 39863..40714 1 NC_011565.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 40714 hisG 7039915 hisG Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP phosphoribosyltransferase YP_002308704.1 39863 D 511995 CDS YP_002308705.1 212550388 7039821 40727..42016 1 NC_011565.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 42016 hisD 7039821 hisD Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 histidinol dehydrogenase YP_002308705.1 40727 D 511995 CDS YP_002308706.1 212550389 7039812 42075..43133 1 NC_011565.1 histidinol-phosphate aminotransferase 43133 7039812 CFPG_032 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 histidinol-phosphate aminotransferase YP_002308706.1 42075 D 511995 CDS YP_002308707.1 212550390 7039845 43105..44208 1 NC_011565.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 44208 7039845 CFPG_033 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_002308707.1 43105 D 511995 CDS YP_002308708.1 212550391 7039387 44287..44559 1 NC_011565.1 hypothetical protein 44559 7039387 CFPG_034 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308708.1 44287 D 511995 CDS YP_002308709.1 212550392 7039811 44568..44864 1 NC_011565.1 hypothetical protein 44864 7039811 CFPG_035 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308709.1 44568 D 511995 CDS YP_002308710.1 212550393 7039839 44971..46515 1 NC_011565.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 46515 7039839 CFPG_036 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphodiesterase YP_002308710.1 44971 D 511995 CDS YP_002308711.1 212550394 7039853 46569..47159 1 NC_011565.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 47159 hisH 7039853 hisH Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 imidazole glycerol phosphate synthase subunit HisH YP_002308711.1 46569 D 511995 CDS YP_002308712.1 212550395 7039930 47203..47925 1 NC_011565.1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide 47925 7039930 CFPG_038 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide YP_002308712.1 47203 D 511995 CDS YP_002308713.1 212550396 7039892 47915..48673 1 NC_011565.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 48673 7039892 CFPG_039 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 imidazole glycerol phosphate synthase subunit HisF YP_002308713.1 47915 D 511995 CDS YP_002308714.1 212550397 7039863 49843..50511 1 NC_011565.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 50511 trmD 7039863 trmD Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA (guanine-N(1)-)-methyltransferase YP_002308714.1 49843 D 511995 CDS YP_002308715.1 212550398 7039950 50805..51995 1 NC_011565.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 51995 7039950 CFPG_041 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tryptophan synthase subunit beta YP_002308715.1 50805 D 511995 CDS YP_002308716.1 212550399 7039965 52037..53110 1 NC_011565.1 recombinase A 53110 7039965 CFPG_042 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 recombinase A YP_002308716.1 52037 D 511995 CDS YP_002308717.1 212550400 7039873 53110..55269 1 NC_011565.1 hypothetical protein 55269 7039873 CFPG_043 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308717.1 53110 D 511995 CDS YP_002308718.1 212550401 7039977 complement(55479..56237) 1 NC_011565.1 hypothetical protein 56237 7039977 CFPG_044 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308718.1 55479 R 511995 CDS YP_002308719.1 212550402 7039877 complement(56318..57412) 1 NC_011565.1 hypothetical protein 57412 7039877 CFPG_045 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308719.1 56318 R 511995 CDS YP_002308720.1 212550403 7039997 complement(57399..58052) 1 NC_011565.1 endonuclease III 58052 7039997 CFPG_046 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 endonuclease III YP_002308720.1 57399 R 511995 CDS YP_002308721.1 212550404 7039980 complement(58066..59085) 1 NC_011565.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 59085 pheS 7039980 pheS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phenylalanyl-tRNA synthetase subunit alpha YP_002308721.1 58066 R 511995 CDS YP_002308722.1 212550405 7039824 complement(59114..60760) 1 NC_011565.1 ATP-dependent RNA helicase 60760 7039824 CFPG_048 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent RNA helicase YP_002308722.1 59114 R 511995 CDS YP_002308723.1 212550406 7039852 complement(60833..61462) 1 NC_011565.1 hypothetical protein 61462 7039852 CFPG_049 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308723.1 60833 R 511995 CDS YP_002308724.1 212550407 7039940 64948..65673 1 NC_011565.1 DNA repair protein RecO 65673 7039940 CFPG_050 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA repair protein RecO YP_002308724.1 64948 D 511995 CDS YP_002308725.1 212550408 7039822 complement(65806..67746) 1 NC_011565.1 hypothetical protein 67746 7039822 CFPG_051 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308725.1 65806 R 511995 CDS YP_002308726.1 212550409 7039820 68167..69420 1 NC_011565.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 69420 nusA 7039820 nusA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transcription elongation factor NusA YP_002308726.1 68167 D 511995 CDS YP_002308727.1 212550410 7039953 69427..72165 1 NC_011565.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 72165 infB 7039953 infB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 translation initiation factor IF-2 YP_002308727.1 69427 D 511995 CDS YP_002308728.1 212550411 7039913 72194..73561 1 NC_011565.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 73561 7039913 CFPG_054 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA repair protein RadA YP_002308728.1 72194 D 511995 CDS YP_002308729.1 212550412 7039553 complement(73569..74885) 1 NC_011565.1 hypothetical protein 74885 7039553 CFPG_055 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308729.1 73569 R 511995 CDS YP_002308730.1 212550413 7039552 75293..75646 1 NC_011565.1 dihydroneopterin aldolase 75646 7039552 CFPG_056 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydroneopterin aldolase YP_002308730.1 75293 D 511995 CDS YP_002308731.1 212550414 7039548 complement(76296..77738) 1 NC_011565.1 NADH dehydrogenase I subunit N 77738 7039548 CFPG_057 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit N YP_002308731.1 76296 R 511995 CDS YP_002308732.1 212550415 7039511 complement(77772..79247) 1 NC_011565.1 NADH dehydrogenase I subunit M 79247 7039511 CFPG_058 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit M YP_002308732.1 77772 R 511995 CDS YP_002308733.1 212550416 7039480 complement(79640..80005) 1 NC_011565.1 hypothetical protein 80005 7039480 CFPG_059 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308733.1 79640 R 511995 CDS YP_002308734.1 212550417 7039537 complement(81063..82976) 1 NC_011565.1 NADH dehydrogenase I subunit L 82976 7039537 CFPG_060 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit L YP_002308734.1 81063 R 511995 CDS YP_002308735.1 212550418 7039535 complement(83242..83595) 1 NC_011565.1 hypothetical protein 83595 7039535 CFPG_061 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308735.1 83242 R 511995 CDS YP_002308736.1 212550419 7039497 complement(84041..85327) 1 NC_011565.1 glucose/galactose transporter 85327 7039497 CFPG_062 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glucose/galactose transporter YP_002308736.1 84041 R 511995 CDS YP_002308737.1 212550420 7039528 complement(85412..85741) 1 NC_011565.1 preprotein translocase subunit SecG 85741 7039528 CFPG_063 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 preprotein translocase subunit SecG YP_002308737.1 85412 R 511995 CDS YP_002308738.1 212550421 7039495 complement(86228..87520) 1 NC_011565.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl- D-alanine ligase 87520 7039495 CFPG_064 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl- D-alanine ligase YP_002308738.1 86228 R 511995 CDS YP_002308739.1 212550422 7039523 87677..88498 1 NC_011565.1 dihydropteroate synthase 88498 7039523 CFPG_065 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydropteroate synthase YP_002308739.1 87677 D 511995 CDS YP_002308740.1 212550423 7039491 88491..89255 1 NC_011565.1 hypothetical protein 89255 7039491 CFPG_066 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308740.1 88491 D 511995 CDS YP_002308741.1 212550424 7039569 complement(89294..91588) 1 NC_011565.1 penicillin-binding protein 1A 91588 7039569 CFPG_067 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 penicillin-binding protein 1A YP_002308741.1 89294 R 511995 CDS YP_002308742.1 212550425 7039620 complement(91754..92266) 1 NC_011565.1 50S ribosomal protein L17 92266 7039620 CFPG_068 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L17 YP_002308742.1 91754 R 511995 CDS YP_002308743.1 212550426 7039619 complement(92269..93255) 1 NC_011565.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 93255 7039619 CFPG_069 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA-directed RNA polymerase subunit alpha YP_002308743.1 92269 R 511995 CDS YP_002308744.1 212550427 7039593 complement(93267..93860) 1 NC_011565.1 30S ribosomal protein S4 93860 7039593 CFPG_070 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S4 YP_002308744.1 93267 R 511995 CDS YP_002308745.1 212550428 7039584 complement(93881..94270) 1 NC_011565.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 94270 7039584 CFPG_071 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S11 YP_002308745.1 93881 R 511995 CDS YP_002308746.1 212550429 7039529 complement(94298..94678) 1 NC_011565.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 94678 rpsM 7039529 rpsM Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S13 YP_002308746.1 94298 R 511995 CDS YP_002308747.1 212550430 7039596 complement(94838..95056) 1 NC_011565.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 95056 infA 7039596 infA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 translation initiation factor IF-1 YP_002308747.1 94838 R 511995 CDS YP_002308748.1 212550431 7039566 complement(95096..95872) 1 NC_011565.1 methionyl aminopeptidase 95872 7039566 CFPG_074 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methionyl aminopeptidase YP_002308748.1 95096 R 511995 CDS YP_002308749.1 212550432 7039591 complement(95917..97263) 1 NC_011565.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 97263 secY 7039591 secY Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 preprotein translocase subunit SecY YP_002308749.1 95917 R 511995 CDS YP_002308750.1 212550433 7039587 complement(97260..97715) 1 NC_011565.1 late assembly protein; 50S ribosomal protein L15 97715 rplO 7039587 rplO Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L15 YP_002308750.1 97260 R 511995 CDS YP_002308751.1 212550434 7039585 complement(97931..98443) 1 NC_011565.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 98443 rpsE 7039585 rpsE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S5 YP_002308751.1 97931 R 511995 CDS YP_002308752.1 212550435 7039659 complement(98461..98805) 1 NC_011565.1 50S ribosomal protein L18 98805 7039659 CFPG_078 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L18 YP_002308752.1 98461 R 511995 CDS YP_002308753.1 212550436 7039658 complement(98828..99382) 1 NC_011565.1 50S ribosomal protein L6 99382 7039658 CFPG_079 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L6 YP_002308753.1 98828 R 511995 CDS YP_002308754.1 212550437 7039574 complement(99393..99788) 1 NC_011565.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 99788 rpsH 7039574 rpsH Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S8 YP_002308754.1 99393 R 511995 CDS YP_002308755.1 212550438 7039628 complement(99916..100185) 1 NC_011565.1 30S ribosomal protein S14 100185 7039628 CFPG_081 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S14 YP_002308755.1 99916 R 511995 CDS YP_002308756.1 212550439 7039623 complement(100199..100759) 1 NC_011565.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 100759 rplE 7039623 rplE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L5 YP_002308756.1 100199 R 511995 CDS YP_002308757.1 212550440 7039649 complement(100759..101079) 1 NC_011565.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 101079 rplX 7039649 rplX Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L24 YP_002308757.1 100759 R 511995 CDS YP_002308758.1 212550441 7039621 complement(101109..101474) 1 NC_011565.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 101474 rplN 7039621 rplN Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L14 YP_002308758.1 101109 R 511995 CDS YP_002308759.1 212550442 7039588 complement(101477..101734) 1 NC_011565.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 101734 rpsQ 7039588 rpsQ Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S17 YP_002308759.1 101477 R 511995 CDS YP_002308760.1 212550443 7039637 complement(101724..101933) 1 NC_011565.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 101933 7039637 CFPG_086 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L29 YP_002308760.1 101724 R 511995 CDS YP_002308761.1 212550444 7039633 complement(102354..102785) 1 NC_011565.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 102785 rplP 7039633 rplP Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L16 YP_002308761.1 102354 R 511995 CDS YP_002308762.1 212550445 7039632 complement(102861..103598) 1 NC_011565.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 103598 rpsC 7039632 rpsC Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S3 YP_002308762.1 102861 R 511995 CDS YP_002308763.1 212550446 7039606 complement(103607..104011) 1 NC_011565.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 104011 rplV 7039606 rplV Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L22 YP_002308763.1 103607 R 511995 CDS YP_002308764.1 212550447 7039605 complement(104020..104289) 1 NC_011565.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 104289 rpsS 7039605 rpsS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S19 YP_002308764.1 104020 R 511995 CDS YP_002308765.1 212550448 7039629 complement(104317..105141) 1 NC_011565.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 105141 rplB 7039629 rplB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L2 YP_002308765.1 104317 R 511995 CDS YP_002308766.1 212550449 7039250 complement(105145..105444) 1 NC_011565.1 50S ribosomal protein L23 105444 7039250 CFPG_092 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L23 YP_002308766.1 105145 R 511995 CDS YP_002308767.1 212550450 7039634 complement(105463..106089) 1 NC_011565.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 106089 rplD 7039634 rplD Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L4 YP_002308767.1 105463 R 511995 CDS YP_002308768.1 212550451 7039664 complement(106089..106703) 1 NC_011565.1 50S ribosomal protein L3 106703 7039664 CFPG_094 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L3 YP_002308768.1 106089 R 511995 CDS YP_002308769.1 212550452 7040002 complement(106828..107139) 1 NC_011565.1 30S ribosomal protein S10 107139 7040002 CFPG_095 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S10 YP_002308769.1 106828 R 511995 CDS YP_002308770.1 212550453 7039916 complement(107589..109718) 1 NC_011565.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 109718 7039916 CFPG_096 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 elongation factor G YP_002308770.1 107589 R 511995 CDS YP_002308771.1 212550454 7039214 complement(109753..110229) 1 NC_011565.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 110229 7039214 CFPG_097 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S7 YP_002308771.1 109753 R 511995 CDS YP_002308772.1 212550455 7039614 complement(110313..110729) 1 NC_011565.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 110729 rpsL 7039614 rpsL Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S12 YP_002308772.1 110313 R 511995 CDS YP_002308773.1 212550456 7039763 complement(111357..112226) 1 NC_011565.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 112226 7039763 CFPG_099 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribonuclease Z YP_002308773.1 111357 R 511995 CDS YP_002308774.1 212550457 7039180 complement(112579..114252) 1 NC_011565.1 methionyl-tRNA synthetase 114252 7039180 CFPG_100 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methionyl-tRNA synthetase YP_002308774.1 112579 R 511995 CDS YP_002308775.1 212550458 7039777 114720..116201 1 NC_011565.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 116201 7039777 CFPG_101 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 prolyl-tRNA synthetase YP_002308775.1 114720 D 511995 CDS YP_002308776.1 212550459 7039772 complement(119843..120190) 1 NC_011565.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 120190 rplT 7039772 rplT Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L20 YP_002308776.1 119843 R 511995 CDS YP_002308777.1 212550460 7039269 complement(120560..121111) 1 NC_011565.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 121111 infC 7039269 infC Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 translation initiation factor IF-3 YP_002308777.1 120560 R 511995 CDS YP_002308778.1 212550461 7039217 complement(121157..123103) 1 NC_011565.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 123103 thrS 7039217 thrS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 threonyl-tRNA synthetase YP_002308778.1 121157 R 511995 CDS YP_002308779.1 212550462 7039220 complement(123351..125048) 1 NC_011565.1 carboxyl-terminal processing protease 125048 7039220 CFPG_105 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 carboxyl-terminal processing protease YP_002308779.1 123351 R 511995 CDS YP_002308780.1 212550463 7039225 complement(125073..125516) 1 NC_011565.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 125516 coaD 7039225 coaD Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphopantetheine adenylyltransferase YP_002308780.1 125073 R 511995 CDS YP_002308781.1 212550464 7039149 complement(125526..126491) 1 NC_011565.1 3-hydroxybutyryl-CoA dehydrogenase 126491 7039149 CFPG_107 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-hydroxybutyryl-CoA dehydrogenase YP_002308781.1 125526 R 511995 CDS YP_002308782.1 212550465 7039247 complement(126538..127539) 1 NC_011565.1 phosphate acetyltransferase 127539 7039247 CFPG_108 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphate acetyltransferase YP_002308782.1 126538 R 511995 CDS YP_002308783.1 212550466 7039765 complement(127615..128376) 1 NC_011565.1 exodeoxyribonuclease III 128376 7039765 CFPG_109 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 exodeoxyribonuclease III YP_002308783.1 127615 R 511995 CDS YP_002308784.1 212550467 7039779 complement(128379..130271) 1 NC_011565.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 130271 7039779 CFPG_110 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 arginine decarboxylase YP_002308784.1 128379 R 511995 CDS YP_002308785.1 212550468 7039291 130421..131089 1 NC_011565.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 131089 ispD 7039291 ispD Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002308785.1 130421 D 511995 CDS YP_002308786.1 212550469 7039374 131108..133231 1 NC_011565.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 133231 7039374 CFPG_112 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent DNA helicase RecG YP_002308786.1 131108 D 511995 CDS YP_002308787.1 212550470 7039303 133361..133513 1 NC_011565.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 133513 rpmH 7039303 rpmH Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L34 YP_002308787.1 133361 D 511995 CDS YP_002308788.1 212550471 7039292 133617..134216 1 NC_011565.1 hypothetical protein 134216 7039292 CFPG_114 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308788.1 133617 D 511995 CDS YP_002308789.1 212550472 7039313 134250..135278 1 NC_011565.1 ribosomal large subunit pseudouridine synthase D 135278 7039313 CFPG_115 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribosomal large subunit pseudouridine synthase D YP_002308789.1 134250 D 511995 CDS YP_002308790.1 212550473 7039288 135275..136249 1 NC_011565.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 136249 ddl 7039288 ddl Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 D-alanyl-alanine synthetase A YP_002308790.1 135275 D 511995 CDS YP_002308791.1 212550474 7039383 136267..137421 1 NC_011565.1 hypothetical protein 137421 7039383 CFPG_117 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308791.1 136267 D 511995 CDS YP_002308792.1 212550475 7039427 137418..139343 1 NC_011565.1 glutamine-dependent amidohydrolase 139343 7039427 CFPG_118 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glutamine-dependent amidohydrolase YP_002308792.1 137418 D 511995 CDS YP_002308793.1 212550476 7039381 complement(139381..140280) 1 NC_011565.1 M23 family peptidase 140280 7039381 CFPG_119 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 M23 family peptidase YP_002308793.1 139381 R 511995 CDS YP_002308794.1 212550477 7039615 complement(140306..140773) 1 NC_011565.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 140773 ndk 7039615 ndk Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nucleoside diphosphate kinase YP_002308794.1 140306 R 511995 CDS YP_002308795.1 212550478 7039451 complement(140915..141937) 1 NC_011565.1 tRNA-dihydrouridine synthase 141937 7039451 CFPG_121 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA-dihydrouridine synthase YP_002308795.1 140915 R 511995 CDS YP_002308796.1 212550479 7039434 complement(141924..143075) 1 NC_011565.1 alanine racemase 143075 7039434 CFPG_122 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 alanine racemase YP_002308796.1 141924 R 511995 CDS YP_002308797.1 212550480 7039435 complement(143424..144383) 1 NC_011565.1 signal recognition particle receptor FtsY 144383 7039435 CFPG_123 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 signal recognition particle receptor FtsY YP_002308797.1 143424 R 511995 CDS YP_002308798.1 212550481 7039464 complement(144522..144674) 1 NC_011565.1 hypothetical protein 144674 7039464 CFPG_124 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308798.1 144522 R 511995 CDS YP_002308799.1 212550482 7039465 complement(144687..144875) 1 NC_011565.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 144875 rpmG 7039465 rpmG Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L33 YP_002308799.1 144687 R 511995 CDS YP_002308800.1 212550483 7039493 complement(144878..145120) 1 NC_011565.1 required for 70S ribosome assembly; 50S ribosomal protein L28 145120 rpmB 7039493 rpmB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L28 YP_002308800.1 144878 R 511995 CDS YP_002308801.1 212550484 7039506 complement(145511..146374) 1 NC_011565.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 146374 ispH 7039506 ispH Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_002308801.1 145511 R 511995 CDS YP_002308802.1 212550485 7039447 146522..147835 1 NC_011565.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 147835 engA 7039447 engA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GTP-binding protein EngA YP_002308802.1 146522 D 511995 CDS YP_002308803.1 212550486 7039555 148238..148834 1 NC_011565.1 ribonuclease H 148834 7039555 CFPG_129 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribonuclease H YP_002308803.1 148238 D 511995 CDS YP_002308804.1 212550487 7039557 149355..151349 1 NC_011565.1 primosomal protein N' 151349 7039557 CFPG_130 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 primosomal protein N' YP_002308804.1 149355 D 511995 CDS YP_002308805.1 212550488 7039342 complement(151685..152245) 1 NC_011565.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 152245 7039342 CFPG_131 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 peptidyl-tRNA hydrolase YP_002308805.1 151685 R 511995 CDS YP_002308806.1 212550489 7039578 complement(152250..152819) 1 NC_011565.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 152819 7039578 CFPG_132 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L25/general stress protein Ctc YP_002308806.1 152250 R 511995 CDS YP_002308807.1 212550490 7039604 complement(153391..153624) 1 NC_011565.1 F-type ATP synthase epsilon subunit 153624 7039604 CFPG_133 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 F-type ATP synthase epsilon subunit YP_002308807.1 153391 R 511995 CDS YP_002308808.1 212550491 7039643 complement(153631..155133) 1 NC_011565.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 155133 7039643 CFPG_134 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 F0F1 ATP synthase subunit beta YP_002308808.1 153631 R 511995 CDS YP_002308809.1 212550492 7039482 155296..156099 1 NC_011565.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 156099 7039482 CFPG_135 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002308809.1 155296 D 511995 CDS YP_002308810.1 212550493 7039798 complement(156591..157007) 1 NC_011565.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 157007 7039798 CFPG_136 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Holliday junction resolvase-like protein YP_002308810.1 156591 R 511995 CDS YP_002308811.1 212550494 7039472 complement(157087..157542) 1 NC_011565.1 transcriptional regulator AsnC 157542 7039472 CFPG_137 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transcriptional regulator AsnC YP_002308811.1 157087 R 511995 CDS YP_002308812.1 212550495 7039806 complement(157529..158518) 1 NC_011565.1 peptidyl-prolyl isomerase 158518 7039806 CFPG_138 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 peptidyl-prolyl isomerase YP_002308812.1 157529 R 511995 CDS YP_002308813.1 212550496 7039810 complement(159082..161562) 1 NC_011565.1 ferrous iron transport protein B 161562 7039810 CFPG_139 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ferrous iron transport protein B YP_002308813.1 159082 R 511995 CDS YP_002308814.1 212550497 7039813 complement(162033..162605) 1 NC_011565.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 162605 ruvC 7039813 ruvC Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Holliday junction resolvase YP_002308814.1 162033 R 511995 CDS YP_002308815.1 212550498 7039586 complement(162789..164204) 1 NC_011565.1 RNA polymerase sigma-54 factor 164204 7039586 CFPG_141 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RNA polymerase sigma-54 factor YP_002308815.1 162789 R 511995 CDS YP_002308816.1 212550499 7039999 164317..166026 1 NC_011565.1 ATP-dependent DNA helicase RecQ 166026 7039999 CFPG_142 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent DNA helicase RecQ YP_002308816.1 164317 D 511995 CDS YP_002308817.1 212550500 7039998 complement(167218..168162) 1 NC_011565.1 homoserine O-succinyltransferase 168162 7039998 CFPG_143 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 homoserine O-succinyltransferase YP_002308817.1 167218 R 511995 CDS YP_002308818.1 212550501 7039958 complement(168373..170241) 1 NC_011565.1 molecular chaperone; heat shock protein 90 170241 7039958 CFPG_144 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 heat shock protein 90 YP_002308818.1 168373 R 511995 CDS YP_002308819.1 212550502 7039944 complement(170255..172471) 1 NC_011565.1 ATP-dependent Clp protease ATP-binding subunit 172471 7039944 CFPG_145 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent Clp protease ATP-binding subunit YP_002308819.1 170255 R 511995 CDS YP_002308820.1 212550503 7039952 172614..173456 1 NC_011565.1 hypothetical protein 173456 7039952 CFPG_146 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308820.1 172614 D 511995 CDS YP_002308821.1 212550504 7039926 173473..173949 1 NC_011565.1 hypothetical protein 173949 7039926 CFPG_147 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308821.1 173473 D 511995 CDS YP_002308822.1 212550505 7039893 174942..175985 1 NC_011565.1 Fe3+-siderophore ABC transporter permease component 175985 7039893 CFPG_148 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Fe3+-siderophore ABC transporter permease component YP_002308822.1 174942 D 511995 CDS YP_002308823.1 212550506 7039978 177336..180266 1 NC_011565.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 180266 7039978 CFPG_149 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 bifunctional preprotein translocase subunit SecD/SecF YP_002308823.1 177336 D 511995 CDS YP_002308824.1 212550507 7039868 complement(180298..180984) 1 NC_011565.1 thiamine pyrophosphokinase 180984 7039868 CFPG_150 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thiamine pyrophosphokinase YP_002308824.1 180298 R 511995 CDS YP_002308825.1 212550508 7039888 complement(180984..181601) 1 NC_011565.1 nicotinamide mononucleotide transporter 181601 7039888 CFPG_151 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nicotinamide mononucleotide transporter YP_002308825.1 180984 R 511995 CDS YP_002308826.1 212550509 7039819 181859..182269 1 NC_011565.1 hypothetical protein 182269 7039819 CFPG_152 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308826.1 181859 D 511995 CDS YP_002308827.1 212550510 7039994 183248..183997 1 NC_011565.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 183997 truA 7039994 truA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA pseudouridine synthase A YP_002308827.1 183248 D 511995 CDS YP_002308828.1 212550511 7039975 184006..184623 1 NC_011565.1 hypothetical protein 184623 7039975 CFPG_154 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308828.1 184006 D 511995 CDS YP_002308829.1 212550512 7039973 complement(187450..187776) 1 NC_011565.1 aspartate 1-decarboxylase 187776 7039973 CFPG_155 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartate 1-decarboxylase YP_002308829.1 187450 R 511995 CDS YP_002308830.1 212550513 7039964 complement(187835..190207) 1 NC_011565.1 ATP-dependent Lon protease 190207 7039964 CFPG_156 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent Lon protease YP_002308830.1 187835 R 511995 CDS YP_002308831.1 212550514 7040000 190406..191953 1 NC_011565.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 191953 7040000 CFPG_157 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glycyl-tRNA synthetase YP_002308831.1 190406 D 511995 CDS YP_002308832.1 212550515 7039638 193399..194592 1 NC_011565.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 194592 7039638 CFPG_158 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acetate kinase YP_002308832.1 193399 D 511995 CDS YP_002308833.1 212550516 7039960 194613..195146 1 NC_011565.1 nitroreductase family protein 195146 7039960 CFPG_159 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitroreductase family protein YP_002308833.1 194613 D 511995 CDS YP_002308834.1 212550517 7039970 complement(195171..196145) 1 NC_011565.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 196145 fmt 7039970 fmt Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methionyl-tRNA formyltransferase YP_002308834.1 195171 R 511995 CDS YP_002308835.1 212550518 7039601 complement(200111..201337) 1 NC_011565.1 sigma-54-dependent transcriptional regulator 201337 7039601 CFPG_161 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 sigma-54-dependent transcriptional regulator YP_002308835.1 200111 R 511995 CDS YP_002308836.1 212550519 7039947 complement(201459..201872) 1 NC_011565.1 hypothetical protein 201872 7039947 CFPG_162 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308836.1 201459 R 511995 CDS YP_002308837.1 212550520 7039942 complement(201912..202496) 1 NC_011565.1 dephospho-CoA kinase 202496 7039942 CFPG_163 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dephospho-CoA kinase YP_002308837.1 201912 R 511995 CDS YP_002308838.1 212550521 7039909 complement(203423..203761) 1 NC_011565.1 preprotein translocase subunit YajC 203761 7039909 CFPG_164 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 preprotein translocase subunit YajC YP_002308838.1 203423 R 511995 CDS YP_002308839.1 212550522 7039900 203853..205337 1 NC_011565.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 205337 gltX 7039900 gltX Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glutamyl-tRNA synthetase YP_002308839.1 203853 D 511995 CDS YP_002308840.1 212550523 7039895 205867..206418 1 NC_011565.1 rubrerythrin 206418 7039895 CFPG_166 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 rubrerythrin YP_002308840.1 205867 D 511995 CDS YP_002308841.1 212550524 7039908 207512..209125 1 NC_011565.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 209125 pyrG 7039908 pyrG Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 CTP synthetase YP_002308841.1 207512 D 511995 CDS YP_002308842.1 212550525 7039891 209254..211092 1 NC_011565.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 211092 7039891 CFPG_168 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 inner membrane protein translocase component YidC YP_002308842.1 209254 D 511995 CDS YP_002308843.1 212550526 7039871 211649..212485 1 NC_011565.1 hydrogenase gamma subunit 212485 7039871 CFPG_169 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hydrogenase gamma subunit YP_002308843.1 211649 D 511995 CDS YP_002308844.1 212550527 7039866 212510..213490 1 NC_011565.1 4-hydroxythreonine-4-phosphate dehydrogenase 213490 7039866 CFPG_170 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 4-hydroxythreonine-4-phosphate dehydrogenase YP_002308844.1 212510 D 511995 CDS YP_002308845.1 212550528 7039848 complement(213538..214710) 1 NC_011565.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 214710 7039848 CFPG_171 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 mannonate dehydratase YP_002308845.1 213538 R 511995 CDS YP_002308846.1 212550529 7039823 215286..216077 1 NC_011565.1 molybdate ABC transporter substrate-binding protein 216077 7039823 CFPG_172 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molybdate ABC transporter substrate-binding protein YP_002308846.1 215286 D 511995 CDS YP_002308847.1 212550530 7039144 complement(221032..221820) 1 NC_011565.1 prephenate dehydrogenase 221820 7039144 CFPG_173 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 prephenate dehydrogenase YP_002308847.1 221032 R 511995 CDS YP_002308848.1 212550531 7040018 complement(221842..222909) 1 NC_011565.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase 222909 7040018 CFPG_174 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase YP_002308848.1 221842 R 511995 CDS YP_002308849.1 212550532 7039666 complement(222914..224089) 1 NC_011565.1 aspartate aminotransferase 224089 7039666 CFPG_175 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartate aminotransferase YP_002308849.1 222914 R 511995 CDS YP_002308850.1 212550533 7039846 complement(224100..224951) 1 NC_011565.1 prephenate dehydratase 224951 7039846 CFPG_176 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 prephenate dehydratase YP_002308850.1 224100 R 511995 CDS YP_002308851.1 212550534 7039917 complement(225509..226222) 1 NC_011565.1 hypothetical protein 226222 7039917 CFPG_177 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308851.1 225509 R 511995 CDS YP_002308852.1 212550535 7039879 complement(228005..228997) 1 NC_011565.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 228997 7039879 CFPG_178 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 fructose-bisphosphate aldolase YP_002308852.1 228005 R 511995 CDS YP_002308853.1 212550536 7039857 complement(230818..233139) 1 NC_011565.1 DNA topoisomerase I 233139 7039857 CFPG_179 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA topoisomerase I YP_002308853.1 230818 R 511995 CDS YP_002308854.1 212550537 7039842 complement(233319..233741) 1 NC_011565.1 molecular chaperone IbpA 233741 7039842 CFPG_180 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molecular chaperone IbpA YP_002308854.1 233319 R 511995 CDS YP_002308855.1 212550538 7039817 complement(235733..236980) 1 NC_011565.1 M23 family peptidase 236980 7039817 CFPG_181 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 M23 family peptidase YP_002308855.1 235733 R 511995 CDS YP_002308856.1 212550539 7039642 complement(236977..237819) 1 NC_011565.1 hypothetical protein 237819 7039642 CFPG_182 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308856.1 236977 R 511995 CDS YP_002308857.1 212550540 7039962 complement(237803..239545) 1 NC_011565.1 hypothetical protein 239545 7039962 CFPG_183 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308857.1 237803 R 511995 CDS YP_002308858.1 212550541 7039957 complement(239567..239998) 1 NC_011565.1 dUTP pyrophosphatase 239998 7039957 CFPG_184 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dUTP pyrophosphatase YP_002308858.1 239567 R 511995 CDS YP_002308859.1 212550542 7039954 240321..240716 1 NC_011565.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 240716 rnpA 7039954 rnpA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribonuclease P YP_002308859.1 240321 D 511995 CDS YP_002308860.1 212550543 7039956 240713..240946 1 NC_011565.1 hypothetical protein 240946 7039956 CFPG_186 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308860.1 240713 D 511995 CDS YP_002308861.1 212550544 7039951 241487..242869 1 NC_011565.1 magnesium transporter 242869 7039951 CFPG_187 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 magnesium transporter YP_002308861.1 241487 D 511995 CDS YP_002308862.1 212550545 7039937 complement(242932..243690) 1 NC_011565.1 uroporphyrinogen-III synthase 243690 7039937 CFPG_188 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 uroporphyrinogen-III synthase YP_002308862.1 242932 R 511995 CDS YP_002308863.1 212550546 7039935 complement(243703..244383) 1 NC_011565.1 hypothetical protein 244383 7039935 CFPG_189 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308863.1 243703 R 511995 CDS YP_002308864.1 212550547 7039922 complement(244954..248163) 1 NC_011565.1 hypothetical protein 248163 7039922 CFPG_190 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308864.1 244954 R 511995 CDS YP_002308865.1 212550548 7039914 248367..249440 1 NC_011565.1 aldose 1-epimerase 249440 7039914 CFPG_191 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aldose 1-epimerase YP_002308865.1 248367 D 511995 CDS YP_002308866.1 212550549 7039910 complement(252328..253716) 1 NC_011565.1 phosphoglucomutase/phosphomannomutase 253716 7039910 CFPG_192 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoglucomutase/phosphomannomutase YP_002308866.1 252328 R 511995 CDS YP_002308867.1 212550550 7039890 complement(253874..254908) 1 NC_011565.1 hypothetical protein 254908 7039890 CFPG_193 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308867.1 253874 R 511995 CDS YP_002308868.1 212550551 7039887 complement(256088..256738) 1 NC_011565.1 ribulose-phosphate 3-epimerase 256738 7039887 CFPG_194 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribulose-phosphate 3-epimerase YP_002308868.1 256088 R 511995 CDS YP_002308869.1 212550552 7039881 complement(256891..257676) 1 NC_011565.1 ribonuclease III 257676 7039881 CFPG_195 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribonuclease III YP_002308869.1 256891 R 511995 CDS YP_002308870.1 212550553 7039883 complement(257669..258940) 1 NC_011565.1 3-oxoacyl-ACP synthase 258940 7039883 CFPG_196 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-oxoacyl-ACP synthase YP_002308870.1 257669 R 511995 CDS YP_002308871.1 212550554 7039770 complement(260109..261107) 1 NC_011565.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 261107 7039770 CFPG_197 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_002308871.1 260109 R 511995 CDS YP_002308872.1 212550555 7039769 complement(261209..263041) 1 NC_011565.1 2-oxoglutarate ferredoxin oxidoreductase alpha/gamma subunit 263041 7039769 CFPG_198 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-oxoglutarate ferredoxin oxidoreductase alpha/gamma subunit YP_002308872.1 261209 R 511995 CDS YP_002308873.1 212550556 7039869 complement(263069..263581) 1 NC_011565.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 263581 7039869 CFPG_199 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 shikimate kinase YP_002308873.1 263069 R 511995 CDS YP_002308874.1 212550557 7039870 263808..264623 1 NC_011565.1 Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 264623 7039870 CFPG_200 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 D-mannonate oxidoreductase YP_002308874.1 263808 D 511995 CDS YP_002308875.1 212550558 7039618 complement(265307..265825) 1 NC_011565.1 hypothetical protein 265825 7039618 CFPG_201 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308875.1 265307 R 511995 CDS YP_002308876.1 212550559 7039860 complement(266585..267235) 1 NC_011565.1 hypothetical protein 267235 7039860 CFPG_202 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308876.1 266585 R 511995 CDS YP_002308877.1 212550560 7039859 complement(267243..269003) 1 NC_011565.1 ribonuclease R 269003 7039859 CFPG_203 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribonuclease R YP_002308877.1 267243 R 511995 CDS YP_002308878.1 212550561 7039430 270339..271865 1 NC_011565.1 serine protease DegQ 271865 7039430 CFPG_204 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 serine protease DegQ YP_002308878.1 270339 D 511995 CDS YP_002308879.1 212550562 7039850 271909..272769 1 NC_011565.1 RNA polymerase primary sigma factor 272769 7039850 CFPG_205 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RNA polymerase primary sigma factor YP_002308879.1 271909 D 511995 CDS YP_002308880.1 212550563 7039844 complement(273244..275637) 1 NC_011565.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 275637 hppA 7039844 hppA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 membrane-bound proton-translocating pyrophosphatase YP_002308880.1 273244 R 511995 CDS YP_002308881.1 212550564 7039834 complement(279903..280445) 1 NC_011565.1 hypothetical protein 280445 7039834 CFPG_207 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308881.1 279903 R 511995 CDS YP_002308882.1 212550565 7039791 complement(281206..281541) 1 NC_011565.1 hypothetical protein 281541 7039791 CFPG_208 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308882.1 281206 R 511995 CDS YP_002308883.1 212550566 7039831 285326..285769 1 NC_011565.1 hypothetical protein 285769 7039831 CFPG_209 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308883.1 285326 D 511995 CDS YP_002308884.1 212550567 7039829 292238..292582 1 NC_011565.1 hypothetical protein 292582 7039829 CFPG_210 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308884.1 292238 D 511995 CDS YP_002308885.1 212550568 7039830 293189..293725 1 NC_011565.1 hypothetical protein 293725 7039830 CFPG_211 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308885.1 293189 D 511995 CDS YP_002308886.1 212550569 7039828 294669..296522 1 NC_011565.1 amidophosphoribosyltransferase 296522 7039828 CFPG_212 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 amidophosphoribosyltransferase YP_002308886.1 294669 D 511995 CDS YP_002308887.1 212550570 7039826 complement(296551..298191) 1 NC_011565.1 alpha-amylase 298191 7039826 CFPG_213 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 alpha-amylase YP_002308887.1 296551 R 511995 CDS YP_002308888.1 212550571 7039989 298986..299717 1 NC_011565.1 cell division protein FtsQ 299717 7039989 CFPG_214 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cell division protein FtsQ YP_002308888.1 298986 D 511995 CDS YP_002308889.1 212550572 7039976 299702..300892 1 NC_011565.1 cell division protein FtsA 300892 7039976 CFPG_215 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cell division protein FtsA YP_002308889.1 299702 D 511995 CDS YP_002308890.1 212550573 7039974 300926..302170 1 NC_011565.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 302170 7039974 CFPG_216 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cell division protein FtsZ YP_002308890.1 300926 D 511995 CDS YP_002308891.1 212550574 7039886 complement(302167..302931) 1 NC_011565.1 undecaprenyl pyrophosphate synthetase 302931 7039886 CFPG_217 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 undecaprenyl pyrophosphate synthetase YP_002308891.1 302167 R 511995 CDS YP_002308892.1 212550575 7039885 303180..304091 1 NC_011565.1 protein methyltransferase HemK 304091 7039885 CFPG_218 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 protein methyltransferase HemK YP_002308892.1 303180 D 511995 CDS YP_002308893.1 212550576 7039882 304333..305115 1 NC_011565.1 hypothetical protein 305115 7039882 CFPG_219 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308893.1 304333 D 511995 CDS YP_002308894.1 212550577 7039875 complement(305352..306614) 1 NC_011565.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 306614 pgk 7039875 pgk Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoglycerate kinase YP_002308894.1 305352 R 511995 CDS YP_002308895.1 212550578 7039838 complement(306944..308023) 1 NC_011565.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 308023 7039838 CFPG_221 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoserine aminotransferase YP_002308895.1 306944 R 511995 CDS YP_002308896.1 212550579 7039835 complement(308198..308500) 1 NC_011565.1 hypothetical protein 308500 7039835 CFPG_222 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308896.1 308198 R 511995 CDS YP_002308897.1 212550580 7039622 complement(311574..312452) 1 NC_011565.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 312452 ppnK 7039622 ppnK Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 inorganic polyphosphate/ATP-NAD kinase YP_002308897.1 311574 R 511995 CDS YP_002308898.1 212550581 7039663 312833..313393 1 NC_011565.1 hypothetical protein 313393 7039663 CFPG_224 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308898.1 312833 D 511995 CDS YP_002308899.1 212550582 7039521 314296..317625 1 NC_011565.1 transcription-repair coupling factor 317625 7039521 CFPG_225 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transcription-repair coupling factor YP_002308899.1 314296 D 511995 CDS YP_002308900.1 212550583 7039519 317628..318926 1 NC_011565.1 folylpolyglutamate synthase 318926 7039519 CFPG_226 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 folylpolyglutamate synthase YP_002308900.1 317628 D 511995 CDS YP_002308901.1 212550584 7039306 complement(318930..320636) 1 NC_011565.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 320636 ureC 7039306 ureC Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 urease subunit alpha YP_002308901.1 318930 R 511995 CDS YP_002308902.1 212550585 7039788 complement(320650..321402) 1 NC_011565.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; bifunctional urease subunit gamma/beta 321402 7039788 CFPG_228 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 bifunctional urease subunit gamma/beta YP_002308902.1 320650 R 511995 CDS YP_002308903.1 212550586 7039150 complement(321407..322111) 1 NC_011565.1 urea/branched-chain amino acid ABC transporter ATP-binding protein 322111 7039150 CFPG_229 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 urea/branched-chain amino acid ABC transporter ATP-binding protein YP_002308903.1 321407 R 511995 CDS YP_002308904.1 212550587 7040004 complement(322120..322881) 1 NC_011565.1 urea/branched-chain amino acid ABC transporter ATP-binding protein 322881 7040004 CFPG_230 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 urea/branched-chain amino acid ABC transporter ATP-binding protein YP_002308904.1 322120 R 511995 CDS YP_002308905.1 212550588 7040021 complement(322891..323946) 1 NC_011565.1 urea/branched-chain amino acid ABC transporter permease 323946 7040021 CFPG_231 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 urea/branched-chain amino acid ABC transporter permease YP_002308905.1 322891 R 511995 CDS YP_002308906.1 212550589 7039656 complement(323956..324861) 1 NC_011565.1 urea/branched-chain amino acid ABC transporter permease 324861 7039656 CFPG_232 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 urea/branched-chain amino acid ABC transporter permease YP_002308906.1 323956 R 511995 CDS YP_002308907.1 212550590 7039655 complement(324955..326235) 1 NC_011565.1 urea/branched-chain amino acid ABC transporter substrate-binding protein 326235 7039655 CFPG_233 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 urea/branched-chain amino acid ABC transporter substrate-binding protein YP_002308907.1 324955 R 511995 CDS YP_002308908.1 212550591 7039648 327831..328823 1 NC_011565.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 328823 7039648 CFPG_234 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tryptophanyl-tRNA synthetase YP_002308908.1 327831 D 511995 CDS YP_002308909.1 212550592 7039641 328906..330315 1 NC_011565.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 330315 7039641 CFPG_235 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glucuronate isomerase YP_002308909.1 328906 D 511995 CDS YP_002308910.1 212550593 7039636 330377..331036 1 NC_011565.1 pit accessory protein 331036 7039636 CFPG_236 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 pit accessory protein YP_002308910.1 330377 D 511995 CDS YP_002308911.1 212550594 7039630 331107..332111 1 NC_011565.1 inorganic phosphate transporter 332111 7039630 CFPG_237 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 inorganic phosphate transporter YP_002308911.1 331107 D 511995 CDS YP_002308912.1 212550595 7039600 332138..332683 1 NC_011565.1 heterodisulfide reductase subunit C 332683 7039600 CFPG_238 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 heterodisulfide reductase subunit C YP_002308912.1 332138 D 511995 CDS YP_002308913.1 212550596 7039611 332683..333528 1 NC_011565.1 heterodisulfide reductase subunit B 333528 7039611 CFPG_239 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 heterodisulfide reductase subunit B YP_002308913.1 332683 D 511995 CDS YP_002308914.1 212550597 7039582 333962..335965 1 NC_011565.1 heterodisulfide reductase subunit A 335965 7039582 CFPG_240 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 heterodisulfide reductase subunit A YP_002308914.1 333962 D 511995 CDS YP_002308915.1 212550598 7039598 336184..336669 1 NC_011565.1 heterodisulfide reductase subunit MvhD 336669 7039598 CFPG_241 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 heterodisulfide reductase subunit MvhD YP_002308915.1 336184 D 511995 CDS YP_002308916.1 212550599 7039595 336662..337465 1 NC_011565.1 hydrogenase 4Fe-4S binding subunit 337465 7039595 CFPG_242 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hydrogenase 4Fe-4S binding subunit YP_002308916.1 336662 D 511995 CDS YP_002308917.1 212550600 7039520 337481..338488 1 NC_011565.1 hydrogenase beta subunit 338488 7039520 CFPG_243 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hydrogenase beta subunit YP_002308917.1 337481 D 511995 CDS YP_002308918.1 212550601 7039517 complement(339166..340452) 1 NC_011565.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 340452 eno 7039517 eno Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphopyruvate hydratase YP_002308918.1 339166 R 511995 CDS YP_002308919.1 212550602 7039565 341126..344521 1 NC_011565.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 344521 ileS 7039565 ileS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 isoleucyl-tRNA synthetase YP_002308919.1 341126 D 511995 CDS YP_002308920.1 212550603 7039564 344614..344991 1 NC_011565.1 DnaK suppressor protein 344991 7039564 CFPG_246 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DnaK suppressor protein YP_002308920.1 344614 D 511995 CDS YP_002308921.1 212550604 7039562 344996..345613 1 NC_011565.1 signal peptidase II 345613 7039562 CFPG_247 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 signal peptidase II YP_002308921.1 344996 D 511995 CDS YP_002308922.1 212550605 7039561 346095..346673 1 NC_011565.1 hypothetical protein 346673 7039561 CFPG_248 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308922.1 346095 D 511995 CDS YP_002308923.1 212550606 7039534 346975..348654 1 NC_011565.1 H+/peptide symporter 348654 7039534 CFPG_249 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 H+/peptide symporter YP_002308923.1 346975 D 511995 CDS YP_002308924.1 212550607 7039559 complement(348703..349149) 1 NC_011565.1 hypothetical protein 349149 7039559 CFPG_250 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308924.1 348703 R 511995 CDS YP_002308925.1 212550608 7039530 349240..350256 1 NC_011565.1 DNA polymerase III subunit delta 350256 7039530 CFPG_251 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA polymerase III subunit delta YP_002308925.1 349240 D 511995 CDS YP_002308926.1 212550609 7039526 complement(351245..352183) 1 NC_011565.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 352183 7039526 CFPG_252 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribose-phosphate pyrophosphokinase YP_002308926.1 351245 R 511995 CDS YP_002308927.1 212550610 7039524 complement(352217..353239) 1 NC_011565.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 353239 7039524 CFPG_253 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 branched-chain amino acid aminotransferase YP_002308927.1 352217 R 511995 CDS YP_002308928.1 212550611 7039516 353386..354339 1 NC_011565.1 methylenetetrahydrofolate reductase 354339 7039516 CFPG_254 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methylenetetrahydrofolate reductase YP_002308928.1 353386 D 511995 CDS YP_002308929.1 212550612 7039512 354343..355479 1 NC_011565.1 DNA polymerase III subunit delta' 355479 7039512 CFPG_255 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA polymerase III subunit delta' YP_002308929.1 354343 D 511995 CDS YP_002308930.1 212550613 7039545 355494..356561 1 NC_011565.1 hypothetical protein 356561 7039545 CFPG_256 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308930.1 355494 D 511995 CDS YP_002308931.1 212550614 7039544 356609..357133 1 NC_011565.1 hypothetical protein 357133 7039544 CFPG_257 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308931.1 356609 D 511995 CDS YP_002308932.1 212550615 7039504 357146..358321 1 NC_011565.1 iron-containing alcohol dehydrogenase 358321 7039504 CFPG_258 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 iron-containing alcohol dehydrogenase YP_002308932.1 357146 D 511995 CDS YP_002308933.1 212550616 7039409 358501..359895 1 NC_011565.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 359895 trmE 7039409 trmE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA modification GTPase TrmE YP_002308933.1 358501 D 511995 CDS YP_002308934.1 212550617 7039426 362890..363327 1 NC_011565.1 hypothetical protein 363327 7039426 CFPG_260 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308934.1 362890 D 511995 CDS YP_002308935.1 212550618 7039532 363460..363687 1 NC_011565.1 ferredoxin 363687 7039532 CFPG_261 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ferredoxin YP_002308935.1 363460 D 511995 CDS YP_002308936.1 212550619 7039470 363761..364960 1 NC_011565.1 anaerobic nitric oxide reductase 364960 7039470 CFPG_262 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 anaerobic nitric oxide reductase YP_002308936.1 363761 D 511995 CDS YP_002308937.1 212550620 7039515 365263..366336 1 NC_011565.1 catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase 366336 7039515 CFPG_263 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-ketoisovalerate ferredoxin reductase YP_002308937.1 365263 D 511995 CDS YP_002308938.1 212550621 7039514 366336..367091 1 NC_011565.1 2-oxoisovalerate ferredoxin oxidoreductase beta subunit 367091 7039514 CFPG_264 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-oxoisovalerate ferredoxin oxidoreductase beta subunit YP_002308938.1 366336 D 511995 CDS YP_002308939.1 212550622 7039507 367097..367642 1 NC_011565.1 2-oxoisovalerate ferredoxin oxidoreductase gamma subunit 367642 7039507 CFPG_265 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-oxoisovalerate ferredoxin oxidoreductase gamma subunit YP_002308939.1 367097 D 511995 CDS YP_002308940.1 212550623 7039503 complement(370989..372863) 1 NC_011565.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 372863 7039503 CFPG_266 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_002308940.1 370989 R 511995 CDS YP_002308941.1 212550624 7039501 complement(372860..373279) 1 NC_011565.1 hypothetical protein 373279 7039501 CFPG_267 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308941.1 372860 R 511995 CDS YP_002308942.1 212550625 7039471 complement(373340..376126) 1 NC_011565.1 DNA polymerase I 376126 7039471 CFPG_268 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA polymerase I YP_002308942.1 373340 R 511995 CDS YP_002308943.1 212550626 7039442 376203..377189 1 NC_011565.1 octaprenyl-diphosphate synthase 377189 7039442 CFPG_269 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 octaprenyl-diphosphate synthase YP_002308943.1 376203 D 511995 CDS YP_002308944.1 212550627 7039467 377211..378314 1 NC_011565.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 378314 7039467 CFPG_270 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GTP-dependent nucleic acid-binding protein EngD YP_002308944.1 377211 D 511995 CDS YP_002308945.1 212550628 7039454 378680..379627 1 NC_011565.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 379627 7039454 CFPG_271 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 quinolinate synthetase YP_002308945.1 378680 D 511995 CDS YP_002308946.1 212550629 7039453 379813..380613 1 NC_011565.1 phosphate ABC transporter ATP-binding protein 380613 7039453 CFPG_272 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphate ABC transporter ATP-binding protein YP_002308946.1 379813 D 511995 CDS YP_002308947.1 212550630 7039428 380697..383057 1 NC_011565.1 ferredoxin-nitrite reductase 383057 7039428 CFPG_273 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ferredoxin-nitrite reductase YP_002308947.1 380697 D 511995 CDS YP_002308948.1 212550631 7039389 383254..384060 1 NC_011565.1 molybdopterin biosynthesis protein MoeB 384060 7039389 CFPG_274 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molybdopterin biosynthesis protein MoeB YP_002308948.1 383254 D 511995 CDS YP_002308949.1 212550632 7039419 384394..385371 1 NC_011565.1 phosphate ABC transporter substrate-binding protein 385371 7039419 CFPG_275 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphate ABC transporter substrate-binding protein YP_002308949.1 384394 D 511995 CDS YP_002308950.1 212550633 7039416 385454..386347 1 NC_011565.1 phosphate ABC transporter permease 386347 7039416 CFPG_276 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphate ABC transporter permease YP_002308950.1 385454 D 511995 CDS YP_002308951.1 212550634 7039415 386344..387195 1 NC_011565.1 phosphate ABC transporter permease 387195 7039415 CFPG_277 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphate ABC transporter permease YP_002308951.1 386344 D 511995 CDS YP_002308952.1 212550635 7039346 387313..389361 1 NC_011565.1 hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase 389361 7039346 CFPG_278 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase YP_002308952.1 387313 D 511995 CDS YP_002308953.1 212550636 7039368 389368..390333 1 NC_011565.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 390333 7039368 CFPG_279 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 delta-aminolevulinic acid dehydratase YP_002308953.1 389368 D 511995 CDS YP_002308954.1 212550637 7039398 390323..391225 1 NC_011565.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 391225 7039398 CFPG_280 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 sulfate adenylyltransferase subunit 2 YP_002308954.1 390323 D 511995 CDS YP_002308955.1 212550638 7039393 391252..392520 1 NC_011565.1 sulfate adenylyltransferase subunit 1 392520 7039393 CFPG_281 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 sulfate adenylyltransferase subunit 1 YP_002308955.1 391252 D 511995 CDS YP_002308956.1 212550639 7039379 392532..393233 1 NC_011565.1 phosphoadenosine phosphosulfate reductase 393233 7039379 CFPG_282 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoadenosine phosphosulfate reductase YP_002308956.1 392532 D 511995 CDS YP_002308957.1 212550640 7039365 393230..393688 1 NC_011565.1 siroheme synthase 393688 7039365 CFPG_283 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 siroheme synthase YP_002308957.1 393230 D 511995 CDS YP_002308958.1 212550641 7039332 393809..394264 1 NC_011565.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 394264 rplM 7039332 rplM Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L13 YP_002308958.1 393809 D 511995 CDS YP_002308959.1 212550642 7039360 394274..394660 1 NC_011565.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 394660 rpsI 7039360 rpsI Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S9 YP_002308959.1 394274 D 511995 CDS YP_002308960.1 212550643 7039358 394690..395478 1 NC_011565.1 30S ribosomal protein S2 395478 7039358 CFPG_286 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S2 YP_002308960.1 394690 D 511995 CDS YP_002308961.1 212550644 7039298 395495..396319 1 NC_011565.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 396319 tsf 7039298 tsf Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 elongation factor Ts YP_002308961.1 395495 D 511995 CDS YP_002308962.1 212550645 7039321 396513..396788 1 NC_011565.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 396788 groES 7039321 groES Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 co-chaperonin GroES YP_002308962.1 396513 D 511995 CDS YP_002308963.1 212550646 7039348 396826..398454 1 NC_011565.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 398454 groEL 7039348 groEL Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 chaperonin GroEL YP_002308963.1 396826 D 511995 CDS YP_002308964.1 212550647 7039324 398743..399306 1 NC_011565.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 399306 7039324 CFPG_290 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 elongation factor P YP_002308964.1 398743 D 511995 CDS YP_002308965.1 212550648 7039319 complement(399309..400403) 1 NC_011565.1 hypothetical protein 400403 7039319 CFPG_291 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308965.1 399309 R 511995 CDS YP_002308966.1 212550649 7039317 400844..401536 1 NC_011565.1 hypothetical protein 401536 7039317 CFPG_292 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308966.1 400844 D 511995 CDS YP_002308967.1 212550650 7039315 complement(401618..402499) 1 NC_011565.1 dTDP-4-dehydrorhamnose reductase 402499 7039315 CFPG_293 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dTDP-4-dehydrorhamnose reductase YP_002308967.1 401618 R 511995 CDS YP_002308968.1 212550651 7039287 403301..403870 1 NC_011565.1 phosphoribosylglycinamide formyltransferase 403870 7039287 CFPG_294 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoribosylglycinamide formyltransferase YP_002308968.1 403301 D 511995 CDS YP_002308969.1 212550652 7039280 complement(404530..404880) 1 NC_011565.1 ribosome-binding factor A 404880 7039280 CFPG_295 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribosome-binding factor A YP_002308969.1 404530 R 511995 CDS YP_002308970.1 212550653 7039311 complement(404902..408018) 1 NC_011565.1 exodeoxyribonuclease V beta subunit 408018 7039311 CFPG_296 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 exodeoxyribonuclease V beta subunit YP_002308970.1 404902 R 511995 CDS YP_002308971.1 212550654 7039307 408061..408981 1 NC_011565.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 408981 miaA 7039307 miaA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002308971.1 408061 D 511995 CDS YP_002308972.1 212550655 7039264 complement(408962..410104) 1 NC_011565.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 410104 7039264 CFPG_298 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 chaperone protein DnaJ YP_002308972.1 408962 R 511995 CDS YP_002308973.1 212550656 7039297 complement(410128..410718) 1 NC_011565.1 molecular chaperone GrpE 410718 7039297 CFPG_299 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molecular chaperone GrpE YP_002308973.1 410128 R 511995 CDS YP_002308974.1 212550657 7039294 complement(411443..412921) 1 NC_011565.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 412921 cysS 7039294 cysS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cysteinyl-tRNA synthetase YP_002308974.1 411443 R 511995 CDS YP_002308975.1 212550658 7039284 413490..414218 1 NC_011565.1 biotin-[acetyl-CoA-carboxylase] ligase 414218 7039284 CFPG_301 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 biotin-[acetyl-CoA-carboxylase] ligase YP_002308975.1 413490 D 511995 CDS YP_002308976.1 212550659 7039285 complement(414213..414803) 1 NC_011565.1 glutamine amidotransferase subunit PdxT 414803 7039285 CFPG_302 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glutamine amidotransferase subunit PdxT YP_002308976.1 414213 R 511995 CDS YP_002308977.1 212550660 7039278 complement(414808..415704) 1 NC_011565.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 415704 7039278 CFPG_303 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 pyridoxal biosynthesis lyase PdxS YP_002308977.1 414808 R 511995 CDS YP_002308978.1 212550661 7039276 415994..417202 1 NC_011565.1 saccharopine dehydrogenase 417202 7039276 CFPG_304 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 saccharopine dehydrogenase YP_002308978.1 415994 D 511995 CDS YP_002308979.1 212550662 7039273 417502..418425 1 NC_011565.1 malate dehydrogenase 418425 7039273 CFPG_305 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 malate dehydrogenase YP_002308979.1 417502 D 511995 CDS YP_002308980.1 212550663 7039248 418532..418798 1 NC_011565.1 hypothetical protein 418798 7039248 CFPG_306 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002308980.1 418532 D 511995 CDS YP_002308981.1 212550664 7039151 419906..420532 1 NC_011565.1 phosphatase 420532 7039151 CFPG_307 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphatase YP_002308981.1 419906 D 511995 CDS YP_002308982.1 212550665 7039444 423764..424186 1 NC_011565.1 cysteine desulfuration protein SufE 424186 7039444 CFPG_308 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cysteine desulfuration protein SufE YP_002308982.1 423764 D 511995 CDS YP_002308983.1 212550666 7039260 424190..424732 1 NC_011565.1 rRNA methyltransferase 424732 7039260 CFPG_309 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 rRNA methyltransferase YP_002308983.1 424190 D 511995 CDS YP_002308984.1 212550667 7039258 425451..427280 1 NC_011565.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 427280 7039258 CFPG_310 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydroxy-acid dehydratase YP_002308984.1 425451 D 511995 CDS YP_002308985.1 212550668 7039246 complement(427758..428849) 1 NC_011565.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 428849 7039246 CFPG_311 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 arginine/ornithine transport system ATPase YP_002308985.1 427758 R 511995 CDS YP_002308986.1 212550669 7039166 429101..433627 1 NC_011565.1 glutamate synthase large subunit 433627 7039166 CFPG_312 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glutamate synthase large subunit YP_002308986.1 429101 D 511995 CDS YP_002308987.1 212550670 7039234 433703..435118 1 NC_011565.1 glutamate synthase small subunit 435118 7039234 CFPG_313 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glutamate synthase small subunit YP_002308987.1 433703 D 511995 CDS YP_002308988.1 212550671 7039233 435174..436886 1 NC_011565.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 436886 asnB 7039233 asnB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 asparagine synthetase B YP_002308988.1 435174 D 511995 CDS YP_002308989.1 212550672 7039226 complement(437012..439276) 1 NC_011565.1 kef-type K+(efflux) /H+ antiporter 439276 7039226 CFPG_315 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 kef-type K+(efflux) /H+ antiporter YP_002308989.1 437012 R 511995 CDS YP_002308990.1 212550673 7039221 439460..441478 1 NC_011565.1 excinuclease ABC subunit B 441478 7039221 CFPG_316 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 excinuclease ABC subunit B YP_002308990.1 439460 D 511995 CDS YP_002308991.1 212550674 7039188 complement(442399..443418) 1 NC_011565.1 aspartate-semialdehyde dehydrogenase 443418 7039188 CFPG_317 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartate-semialdehyde dehydrogenase YP_002308991.1 442399 R 511995 CDS YP_002308992.1 212550675 7039208 complement(443578..444546) 1 NC_011565.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 444546 7039208 CFPG_318 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribosomal RNA large subunit methyltransferase N YP_002308992.1 443578 R 511995 CDS YP_002308993.1 212550676 7039207 complement(444605..446740) 1 NC_011565.1 peptidyl-prolyl cis-trans isomerase 446740 7039207 CFPG_319 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 peptidyl-prolyl cis-trans isomerase YP_002308993.1 444605 R 511995 CDS YP_002308994.1 212550677 7039204 complement(446838..447467) 1 NC_011565.1 O-methyltransferase family protein 447467 7039204 CFPG_320 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 O-methyltransferase family protein YP_002308994.1 446838 R 511995 CDS YP_002308995.1 212550678 7039200 complement(447464..447883) 1 NC_011565.1 3-dehydroquinate dehydratase 447883 7039200 CFPG_321 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-dehydroquinate dehydratase YP_002308995.1 447464 R 511995 CDS YP_002308996.1 212550679 7039197 447955..448854 1 NC_011565.1 site-specific recombinase XerD 448854 7039197 CFPG_322 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 site-specific recombinase XerD YP_002308996.1 447955 D 511995 CDS YP_002308997.1 212550680 7039162 448991..450118 1 NC_011565.1 acetylornithine aminotransferase 450118 7039162 CFPG_323 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acetylornithine aminotransferase YP_002308997.1 448991 D 511995 CDS YP_002308998.1 212550681 7039179 450149..450958 1 NC_011565.1 pyrroline-5-carboxylate reductase 450958 7039179 CFPG_324 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 pyrroline-5-carboxylate reductase YP_002308998.1 450149 D 511995 CDS YP_002308999.1 212550682 7039157 452346..453308 1 NC_011565.1 glucokinase 453308 7039157 CFPG_325 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glucokinase YP_002308999.1 452346 D 511995 CDS YP_002309000.1 212550683 7039154 454186..455205 1 NC_011565.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 455205 ruvB 7039154 ruvB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Holliday junction DNA helicase RuvB YP_002309000.1 454186 D 511995 CDS YP_002309001.1 212550684 7039153 455215..456702 1 NC_011565.1 polysaccharide biosynthesis protein 456702 7039153 CFPG_327 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 polysaccharide biosynthesis protein YP_002309001.1 455215 D 511995 CDS YP_002309002.1 212550685 7039333 complement(457818..459467) 1 NC_011565.1 permease YidE-like protein 459467 7039333 CFPG_328 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 permease YidE-like protein YP_002309002.1 457818 R 511995 CDS YP_002309003.1 212550686 7040027 complement(462053..462568) 1 NC_011565.1 cob(I)alamin adenosyltransferase 462568 7040027 CFPG_329 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cob(I)alamin adenosyltransferase YP_002309003.1 462053 R 511995 CDS YP_002309004.1 212550687 7039995 465831..466922 1 NC_011565.1 A/G-specific adenine glycosylase 466922 7039995 CFPG_330 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 A/G-specific adenine glycosylase YP_002309004.1 465831 D 511995 CDS YP_002309005.1 212550688 7040017 467001..467459 1 NC_011565.1 single-strand DNA-binding protein 467459 7040017 CFPG_331 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 single-strand DNA-binding protein YP_002309005.1 467001 D 511995 CDS YP_002309006.1 212550689 7039816 467536..468603 1 NC_011565.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 468603 mnmA 7039816 mnmA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA-specific 2-thiouridylase MnmA YP_002309006.1 467536 D 511995 CDS YP_002309007.1 212550690 7039187 468694..469767 1 NC_011565.1 mannose-1-phosphate guanylyltransferase 469767 7039187 CFPG_333 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 mannose-1-phosphate guanylyltransferase YP_002309007.1 468694 D 511995 CDS YP_002309008.1 212550691 7039194 complement(469962..472583) 1 NC_011565.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 472583 valS 7039194 valS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 valyl-tRNA synthetase YP_002309008.1 469962 R 511995 CDS YP_002309009.1 212550692 7039171 472770..473078 1 NC_011565.1 DNA-binding protein HU 473078 7039171 CFPG_335 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA-binding protein HU YP_002309009.1 472770 D 511995 CDS YP_002309010.1 212550693 7039168 complement(473547..474593) 1 NC_011565.1 ketol-acid reductoisomerase 474593 7039168 CFPG_336 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ketol-acid reductoisomerase YP_002309010.1 473547 R 511995 CDS YP_002309011.1 212550694 7039164 474870..478229 1 NC_011565.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 478229 secA 7039164 secA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 preprotein translocase subunit SecA YP_002309011.1 474870 D 511995 CDS YP_002309012.1 212550695 7039156 478576..480132 1 NC_011565.1 ribonuclease G 480132 7039156 CFPG_338 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribonuclease G YP_002309012.1 478576 D 511995 CDS YP_002309013.1 212550696 7039184 480209..482938 1 NC_011565.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 482938 7039184 CFPG_339 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 pyruvate phosphate dikinase YP_002309013.1 480209 D 511995 CDS YP_002309014.1 212550697 7039299 complement(483619..485337) 1 NC_011565.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 485337 7039299 CFPG_340 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glutaminyl-tRNA synthetase YP_002309014.1 483619 R 511995 CDS YP_002309015.1 212550698 7039169 485409..485717 1 NC_011565.1 hypothetical protein 485717 7039169 CFPG_341 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309015.1 485409 D 511995 CDS YP_002309016.1 212550699 7039146 complement(486015..487124) 1 NC_011565.1 2-nitropropane dioxygenase 487124 7039146 CFPG_342 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-nitropropane dioxygenase YP_002309016.1 486015 R 511995 CDS YP_002309017.1 212550700 7039152 487235..488803 1 NC_011565.1 L-aspartate oxidase 488803 7039152 CFPG_343 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 L-aspartate oxidase YP_002309017.1 487235 D 511995 CDS YP_002309018.1 212550701 7039143 complement(489606..490604) 1 NC_011565.1 glyceraldehyde 3-phosphate dehydrogenase 490604 7039143 CFPG_344 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glyceraldehyde 3-phosphate dehydrogenase YP_002309018.1 489606 R 511995 CDS YP_002309019.1 212550702 7039141 complement(490856..491908) 1 NC_011565.1 4-amino-4-deoxychorismate lyase 491908 7039141 CFPG_345 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 4-amino-4-deoxychorismate lyase YP_002309019.1 490856 R 511995 CDS YP_002309020.1 212550703 7040034 complement(491915..492817) 1 NC_011565.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 492817 era 7040034 era Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GTP-binding protein Era YP_002309020.1 491915 R 511995 CDS YP_002309021.1 212550704 7040033 complement(492807..493763) 1 NC_011565.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 493763 argC 7040033 argC Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 N-acetyl-gamma-glutamyl-phosphate reductase YP_002309021.1 492807 R 511995 CDS YP_002309022.1 212550705 7040015 complement(494877..496079) 1 NC_011565.1 argininosuccinate synthase 496079 7040015 CFPG_348 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 argininosuccinate synthase YP_002309022.1 494877 R 511995 CDS YP_002309023.1 212550706 7040032 complement(496129..496668) 1 NC_011565.1 hypothetical protein 496668 7040032 CFPG_349 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309023.1 496129 R 511995 CDS YP_002309024.1 212550707 7040028 complement(499360..499674) 1 NC_011565.1 thioredoxin 499674 7040028 CFPG_350 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thioredoxin YP_002309024.1 499360 R 511995 CDS YP_002309025.1 212550708 7040003 complement(499729..503418) 1 NC_011565.1 DNA polymerase III subunit alpha 503418 7040003 CFPG_351 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA polymerase III subunit alpha YP_002309025.1 499729 R 511995 CDS YP_002309026.1 212550709 7040023 503942..504889 1 NC_011565.1 transporter 504889 7040023 CFPG_352 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transporter YP_002309026.1 503942 D 511995 CDS YP_002309027.1 212550710 7039592 complement(505227..505850) 1 NC_011565.1 hypothetical protein 505850 7039592 CFPG_353 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309027.1 505227 R 511995 CDS YP_002309028.1 212550711 7040008 complement(505850..507268) 1 NC_011565.1 signal peptidase I 507268 7040008 CFPG_354 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 signal peptidase I YP_002309028.1 505850 R 511995 CDS YP_002309029.1 212550712 7039191 complement(507292..507993) 1 NC_011565.1 dihydrodipicolinate reductase 507993 7039191 CFPG_355 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydrodipicolinate reductase YP_002309029.1 507292 R 511995 CDS YP_002309030.1 212550713 7039420 complement(511608..512810) 1 NC_011565.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 512810 7039420 CFPG_356 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartate aminotransferase YP_002309030.1 511608 R 511995 CDS YP_002309031.1 212550714 7039290 complement(512967..513221) 1 NC_011565.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 513221 rpsT 7039290 rpsT Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S20 YP_002309031.1 512967 R 511995 CDS YP_002309032.1 212550715 7039382 complement(513386..515161) 1 NC_011565.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 515161 7039382 CFPG_358 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002309032.1 513386 R 511995 CDS YP_002309033.1 212550716 7039201 complement(515193..515699) 1 NC_011565.1 phosphoribosylaminoimidazole carboxylase catalytic subunit 515699 7039201 CFPG_359 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_002309033.1 515193 R 511995 CDS YP_002309034.1 212550717 7039267 complement(516347..516988) 1 NC_011565.1 hypothetical protein 516988 7039267 CFPG_360 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309034.1 516347 R 511995 CDS YP_002309035.1 212550718 7039262 complement(517132..518793) 1 NC_011565.1 carboxyl-terminal processing protease 518793 7039262 CFPG_361 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 carboxyl-terminal processing protease YP_002309035.1 517132 R 511995 CDS YP_002309036.1 212550719 7039380 complement(519224..520180) 1 NC_011565.1 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase 520180 7039380 CFPG_362 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_002309036.1 519224 R 511995 CDS YP_002309037.1 212550720 7039259 520278..520547 1 NC_011565.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 520547 rpsO 7039259 rpsO Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S15 YP_002309037.1 520278 D 511995 CDS YP_002309038.1 212550721 7039231 complement(520556..521425) 1 NC_011565.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 521425 7039231 CFPG_364 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 F0F1 ATP synthase subunit gamma YP_002309038.1 520556 R 511995 CDS YP_002309039.1 212550722 7039199 complement(521464..523044) 1 NC_011565.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 523044 7039199 CFPG_365 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 F0F1 ATP synthase subunit alpha YP_002309039.1 521464 R 511995 CDS YP_002309040.1 212550723 7039219 complement(523032..523565) 1 NC_011565.1 F-type ATP synthase delta subunit 523565 7039219 CFPG_366 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 F-type ATP synthase delta subunit YP_002309040.1 523032 R 511995 CDS YP_002309041.1 212550724 7039241 complement(523602..524090) 1 NC_011565.1 F-type ATP synthase B subunit 524090 7039241 CFPG_367 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 F-type ATP synthase B subunit YP_002309041.1 523602 R 511995 CDS YP_002309042.1 212550725 7039237 complement(524105..524353) 1 NC_011565.1 F-type ATP synthase C subunit 524353 7039237 CFPG_368 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 F-type ATP synthase C subunit YP_002309042.1 524105 R 511995 CDS YP_002309043.1 212550726 7039236 complement(524672..525772) 1 NC_011565.1 F-type ATP synthase A subunit 525772 7039236 CFPG_369 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 F-type ATP synthase A subunit YP_002309043.1 524672 R 511995 CDS YP_002309044.1 212550727 7039228 complement(526165..527475) 1 NC_011565.1 membrane-associated Zn-dependent protease 527475 7039228 CFPG_370 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 membrane-associated Zn-dependent protease YP_002309044.1 526165 R 511995 CDS YP_002309045.1 212550728 7039224 complement(527472..528635) 1 NC_011565.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 528635 7039224 CFPG_371 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002309045.1 527472 R 511995 CDS YP_002309046.1 212550729 7039203 528943..531714 1 NC_011565.1 excinuclease ABC subunit A 531714 7039203 CFPG_372 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 excinuclease ABC subunit A YP_002309046.1 528943 D 511995 CDS YP_002309047.1 212550730 7039376 531734..532252 1 NC_011565.1 acetyltransferase 532252 7039376 CFPG_373 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acetyltransferase YP_002309047.1 531734 D 511995 CDS YP_002309048.1 212550731 7039310 532805..533467 1 NC_011565.1 uracil-DNA glycosylase 533467 7039310 CFPG_374 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 uracil-DNA glycosylase YP_002309048.1 532805 D 511995 CDS YP_002309049.1 212550732 7039405 complement(533635..536145) 1 NC_011565.1 hypothetical protein 536145 7039405 CFPG_375 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309049.1 533635 R 511995 CDS YP_002309050.1 212550733 7039357 complement(537095..538048) 1 NC_011565.1 N-acetylornithine carbamoyltransferase 538048 7039357 CFPG_376 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 N-acetylornithine carbamoyltransferase YP_002309050.1 537095 R 511995 CDS YP_002309051.1 212550734 7039296 538411..538911 1 NC_011565.1 regulatory protein RecX 538911 7039296 CFPG_377 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 regulatory protein RecX YP_002309051.1 538411 D 511995 CDS YP_002309052.1 212550735 7039349 complement(538901..539932) 1 NC_011565.1 hypothetical protein 539932 7039349 CFPG_378 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309052.1 538901 R 511995 CDS YP_002309053.1 212550736 7039289 complement(540002..540598) 1 NC_011565.1 hypothetical protein 540598 7039289 CFPG_379 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309053.1 540002 R 511995 CDS YP_002309054.1 212550737 7039347 540985..541242 1 NC_011565.1 acyl carrier protein 541242 7039347 CFPG_380 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acyl carrier protein YP_002309054.1 540985 D 511995 CDS YP_002309055.1 212550738 7039336 541478..542533 1 NC_011565.1 succinyl-diaminopimelate desuccinylase 542533 7039336 CFPG_381 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 succinyl-diaminopimelate desuccinylase YP_002309055.1 541478 D 511995 CDS YP_002309056.1 212550739 7039249 542855..543745 1 NC_011565.1 molybdenum cofactor biosynthesis protein A 543745 7039249 CFPG_382 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molybdenum cofactor biosynthesis protein A YP_002309056.1 542855 D 511995 CDS YP_002309057.1 212550740 7039301 543899..544252 1 NC_011565.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 544252 rplS 7039301 rplS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L19 YP_002309057.1 543899 D 511995 CDS YP_002309058.1 212550741 7039327 complement(544437..547088) 1 NC_011565.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 547088 7039327 CFPG_384 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA mismatch repair protein MutS YP_002309058.1 544437 R 511995 CDS YP_002309059.1 212550742 7039326 complement(547436..547960) 1 NC_011565.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 547960 7039326 CFPG_385 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_002309059.1 547436 R 511995 CDS YP_002309060.1 212550743 7039325 complement(548026..548844) 1 NC_011565.1 small conductance mechanosensitive ion channel 548844 7039325 CFPG_386 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 small conductance mechanosensitive ion channel YP_002309060.1 548026 R 511995 CDS YP_002309061.1 212550744 7039323 549238..549702 1 NC_011565.1 hypothetical protein 549702 7039323 CFPG_387 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309061.1 549238 D 511995 CDS YP_002309062.1 212550745 7039295 549720..550700 1 NC_011565.1 hypothetical protein 550700 7039295 CFPG_388 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309062.1 549720 D 511995 CDS YP_002309063.1 212550746 7039279 551587..552171 1 NC_011565.1 anthranilate synthase component II 552171 7039279 CFPG_389 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 anthranilate synthase component II YP_002309063.1 551587 D 511995 CDS YP_002309064.1 212550747 7039448 552205..553230 1 NC_011565.1 anthranilate phosphoribosyltransferase 553230 7039448 CFPG_390 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 anthranilate phosphoribosyltransferase YP_002309064.1 552205 D 511995 CDS YP_002309065.1 212550748 7039449 553248..554036 1 NC_011565.1 indole-3-glycerol phosphate synthase 554036 7039449 CFPG_391 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 indole-3-glycerol phosphate synthase YP_002309065.1 553248 D 511995 CDS YP_002309066.1 212550749 7039418 554033..554647 1 NC_011565.1 phosphoribosylanthranilate isomerase 554647 7039418 CFPG_392 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoribosylanthranilate isomerase YP_002309066.1 554033 D 511995 CDS YP_002309067.1 212550750 7039385 554663..555433 1 NC_011565.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 555433 trpA 7039385 trpA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tryptophan synthase subunit alpha YP_002309067.1 554663 D 511995 CDS YP_002309068.1 212550751 7039438 555453..556955 1 NC_011565.1 replicative DNA helicase DnaB 556955 7039438 CFPG_394 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 replicative DNA helicase DnaB YP_002309068.1 555453 D 511995 CDS YP_002309069.1 212550752 7039344 557179..557877 1 NC_011565.1 NAD-dependent deacetylase 557877 7039344 CFPG_395 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NAD-dependent deacetylase YP_002309069.1 557179 D 511995 CDS YP_002309070.1 212550753 7039403 558977..562651 1 NC_011565.1 cobalamin-dependent methionine synthase 562651 7039403 CFPG_396 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cobalamin-dependent methionine synthase YP_002309070.1 558977 D 511995 CDS YP_002309071.1 212550754 7039432 562651..563241 1 NC_011565.1 Holliday junction DNA helicase RuvA 563241 7039432 CFPG_397 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Holliday junction DNA helicase RuvA YP_002309071.1 562651 D 511995 CDS YP_002309072.1 212550755 7039431 complement(563277..564332) 1 NC_011565.1 3-dehydroquinate synthase 564332 7039431 CFPG_398 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-dehydroquinate synthase YP_002309072.1 563277 R 511995 CDS YP_002309073.1 212550756 7039423 complement(564579..564977) 1 NC_011565.1 hypothetical protein 564977 7039423 CFPG_399 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309073.1 564579 R 511995 CDS YP_002309074.1 212550757 7039422 complement(564974..565444) 1 NC_011565.1 transcription elongation factor GreA 565444 7039422 CFPG_400 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transcription elongation factor GreA YP_002309074.1 564974 R 511995 CDS YP_002309075.1 212550758 7039359 566577..567449 1 NC_011565.1 hypothetical protein 567449 7039359 CFPG_401 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309075.1 566577 D 511995 CDS YP_002309076.1 212550759 7039417 567471..568088 1 NC_011565.1 guanylate kinase 568088 7039417 CFPG_402 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 guanylate kinase YP_002309076.1 567471 D 511995 CDS YP_002309077.1 212550760 7039410 568085..568657 1 NC_011565.1 nicotinate-nucleotide adenylyltransferase 568657 7039410 CFPG_403 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nicotinate-nucleotide adenylyltransferase YP_002309077.1 568085 D 511995 CDS YP_002309078.1 212550761 7039407 568739..569998 1 NC_011565.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 569998 7039407 CFPG_404 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 adenylosuccinate synthetase YP_002309078.1 568739 D 511995 CDS YP_002309079.1 212550762 7039371 570027..570713 1 NC_011565.1 Zn-dependent protease 570713 7039371 CFPG_405 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Zn-dependent protease YP_002309079.1 570027 D 511995 CDS YP_002309080.1 212550763 7039370 570737..571303 1 NC_011565.1 hypothetical protein 571303 7039370 CFPG_406 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309080.1 570737 D 511995 CDS YP_002309081.1 212550764 7039369 complement(571340..571786) 1 NC_011565.1 ribose 5-phosphate isomerase B 571786 7039369 CFPG_407 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribose 5-phosphate isomerase B YP_002309081.1 571340 R 511995 CDS YP_002309082.1 212550765 7039367 complement(571793..573817) 1 NC_011565.1 transketolase 573817 7039367 CFPG_408 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transketolase YP_002309082.1 571793 R 511995 CDS YP_002309083.1 212550766 7039364 complement(574565..575347) 1 NC_011565.1 iron ABC transporter ATP-binding protein 575347 7039364 CFPG_409 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 iron ABC transporter ATP-binding protein YP_002309083.1 574565 R 511995 CDS YP_002309084.1 212550767 7039397 complement(575351..576592) 1 NC_011565.1 Zn-dependent protease 576592 7039397 CFPG_410 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Zn-dependent protease YP_002309084.1 575351 R 511995 CDS YP_002309085.1 212550768 7039485 complement(576806..576997) 1 NC_011565.1 30S ribosomal protein S21 576997 7039485 CFPG_411 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S21 YP_002309085.1 576806 R 511995 CDS YP_002309086.1 212550769 7039478 577640..579277 1 NC_011565.1 carboxyl-terminal processing protease 579277 7039478 CFPG_412 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 carboxyl-terminal processing protease YP_002309086.1 577640 D 511995 CDS YP_002309087.1 212550770 7039499 579531..581765 1 NC_011565.1 GTP pyrophosphokinase 581765 7039499 CFPG_413 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GTP pyrophosphokinase YP_002309087.1 579531 D 511995 CDS YP_002309088.1 212550771 7039500 complement(581762..582055) 1 NC_011565.1 hypothetical protein 582055 7039500 CFPG_414 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309088.1 581762 R 511995 CDS YP_002309089.1 212550772 7039496 complement(582933..583757) 1 NC_011565.1 23S rRNA (guanosine-2'-O-)-methyltransferase 583757 7039496 CFPG_415 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 23S rRNA (guanosine-2'-O-)-methyltransferase YP_002309089.1 582933 R 511995 CDS YP_002309090.1 212550773 7039445 complement(584085..586133) 1 NC_011565.1 1,4-alpha-glucan-branching protein 586133 7039445 CFPG_416 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 1,4-alpha-glucan-branching protein YP_002309090.1 584085 R 511995 CDS YP_002309091.1 212550774 7039469 587127..587480 1 NC_011565.1 NADH dehydrogenase I subunit A 587480 7039469 CFPG_417 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit A YP_002309091.1 587127 D 511995 CDS YP_002309092.1 212550775 7039484 587501..588076 1 NC_011565.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 588076 7039484 CFPG_418 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase subunit B YP_002309092.1 587501 D 511995 CDS YP_002309093.1 212550776 7039479 588073..589674 1 NC_011565.1 NADH dehydrogenase I subunit CD 589674 7039479 CFPG_419 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit CD YP_002309093.1 588073 D 511995 CDS YP_002309094.1 212550777 7039443 590031..591098 1 NC_011565.1 NADH dehydrogenase I subunit H 591098 7039443 CFPG_420 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit H YP_002309094.1 590031 D 511995 CDS YP_002309095.1 212550778 7039468 591095..591553 1 NC_011565.1 NADH dehydrogenase I subunit I 591553 7039468 CFPG_421 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit I YP_002309095.1 591095 D 511995 CDS YP_002309096.1 212550779 7039461 591558..592079 1 NC_011565.1 NADH dehydrogenase I subunit J 592079 7039461 CFPG_422 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit J YP_002309096.1 591558 D 511995 CDS YP_002309097.1 212550780 7039408 592717..593025 1 NC_011565.1 NADH dehydrogenase I subunit K 593025 7039408 CFPG_423 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADH dehydrogenase I subunit K YP_002309097.1 592717 D 511995 CDS YP_002309098.1 212550781 7039556 593809..595113 1 NC_011565.1 tyrosyl-tRNA synthetase 595113 7039556 CFPG_424 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tyrosyl-tRNA synthetase YP_002309098.1 593809 D 511995 CDS YP_002309099.1 212550782 7039402 595470..596369 1 NC_011565.1 site-specific recombinase XerC 596369 7039402 CFPG_425 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 site-specific recombinase XerC YP_002309099.1 595470 D 511995 CDS YP_002309100.1 212550783 7039547 complement(596717..597508) 1 NC_011565.1 N-acetylmuramoyl-L-alanine amidase 597508 7039547 CFPG_426 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 N-acetylmuramoyl-L-alanine amidase YP_002309100.1 596717 R 511995 CDS YP_002309101.1 212550784 7039458 complement(597919..598332) 1 NC_011565.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 598332 7039458 CFPG_427 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_002309101.1 597919 R 511995 CDS YP_002309102.1 212550785 7039518 complement(598332..599396) 1 NC_011565.1 S-adenosylmethionine--tRNA ribosyltransferase-isomerase 599396 7039518 CFPG_428 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_002309102.1 598332 R 511995 CDS YP_002309103.1 212550786 7039549 complement(599406..600086) 1 NC_011565.1 tRNA pseudouridine synthase B 600086 7039549 CFPG_429 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA pseudouridine synthase B YP_002309103.1 599406 R 511995 CDS YP_002309104.1 212550787 7039505 complement(600100..600324) 1 NC_011565.1 hypothetical protein 600324 7039505 CFPG_430 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309104.1 600100 R 511995 CDS YP_002309105.1 212550788 7039483 complement(600337..601221) 1 NC_011565.1 cell division protein FtsX 601221 7039483 CFPG_431 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cell division protein FtsX YP_002309105.1 600337 R 511995 CDS YP_002309106.1 212550789 7039644 603969..605084 1 NC_011565.1 oxygen-independent coproporphyrinogen III oxidase 605084 7039644 CFPG_432 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 oxygen-independent coproporphyrinogen III oxidase YP_002309106.1 603969 D 511995 CDS YP_002309107.1 212550790 7039502 complement(605062..605526) 1 NC_011565.1 hypothetical protein 605526 7039502 CFPG_433 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309107.1 605062 R 511995 CDS YP_002309108.1 212550791 7039538 606072..606752 1 NC_011565.1 molybdate ABC transporter permease 606752 7039538 CFPG_434 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molybdate ABC transporter permease YP_002309108.1 606072 D 511995 CDS YP_002309109.1 212550792 7039492 606749..607402 1 NC_011565.1 molybdate ABC transporter ATP-binding protein 607402 7039492 CFPG_435 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molybdate ABC transporter ATP-binding protein YP_002309109.1 606749 D 511995 CDS YP_002309110.1 212550793 7039522 607506..608987 1 NC_011565.1 acetyl-CoA hydrolase/transferase 608987 7039522 CFPG_436 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acetyl-CoA hydrolase/transferase YP_002309110.1 607506 D 511995 CDS YP_002309111.1 212550794 7039599 complement(609007..609924) 1 NC_011565.1 transcription termination factor NusB 609924 7039599 CFPG_437 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 transcription termination factor NusB YP_002309111.1 609007 R 511995 CDS YP_002309112.1 212550795 7039613 complement(610156..611334) 1 NC_011565.1 aspartate aminotransferase 611334 7039613 CFPG_438 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartate aminotransferase YP_002309112.1 610156 R 511995 CDS YP_002309113.1 212550796 7039610 complement(611368..612345) 1 NC_011565.1 NADP-dependent thioredoxin reductase 612345 7039610 CFPG_439 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADP-dependent thioredoxin reductase YP_002309113.1 611368 R 511995 CDS YP_002309114.1 212550797 7039531 complement(613058..615388) 1 NC_011565.1 DNA translocase FtsK 615388 7039531 CFPG_440 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA translocase FtsK YP_002309114.1 613058 R 511995 CDS YP_002309115.1 212550798 7039608 complement(615406..617418) 1 NC_011565.1 DNA primase 617418 7039608 CFPG_441 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA primase YP_002309115.1 615406 R 511995 CDS YP_002309116.1 212550799 7039575 complement(618304..619023) 1 NC_011565.1 DNA alkylation repair protein 619023 7039575 CFPG_442 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA alkylation repair protein YP_002309116.1 618304 R 511995 CDS YP_002309117.1 212550800 7039597 complement(619031..620380) 1 NC_011565.1 ArsB/NhaD family permease 620380 7039597 CFPG_443 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ArsB/NhaD family permease YP_002309117.1 619031 R 511995 CDS YP_002309118.1 212550801 7039594 620801..623245 1 NC_011565.1 4-alpha-glucanotransferase 623245 7039594 CFPG_444 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 4-alpha-glucanotransferase YP_002309118.1 620801 D 511995 CDS YP_002309119.1 212550802 7039646 624277..625089 1 NC_011565.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 625089 7039646 CFPG_445 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 purine nucleoside phosphorylase YP_002309119.1 624277 D 511995 CDS YP_002309120.1 212550803 7039653 complement(626227..627060) 1 NC_011565.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 627060 7039653 CFPG_446 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 prolipoprotein diacylglyceryl transferase YP_002309120.1 626227 R 511995 CDS YP_002309121.1 212550804 7039652 627268..628740 1 NC_011565.1 hypothetical protein 628740 7039652 CFPG_447 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309121.1 627268 D 511995 CDS YP_002309122.1 212550805 7039626 628862..632407 1 NC_011565.1 pyruvate-flavodoxin oxidoreductase 632407 7039626 CFPG_448 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 pyruvate-flavodoxin oxidoreductase YP_002309122.1 628862 D 511995 CDS YP_002309123.1 212550806 7039650 632927..633454 1 NC_011565.1 chromate exporter 633454 7039650 CFPG_449 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 chromate exporter YP_002309123.1 632927 D 511995 CDS YP_002309124.1 212550807 7039612 633471..634295 1 NC_011565.1 hypothetical protein 634295 7039612 CFPG_450 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309124.1 633471 D 511995 CDS YP_002309125.1 212550808 7039635 634308..635330 1 NC_011565.1 hemolysin A 635330 7039635 CFPG_451 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hemolysin A YP_002309125.1 634308 D 511995 CDS YP_002309126.1 212550809 7039609 complement(636901..638874) 1 NC_011565.1 hypothetical protein 638874 7039609 CFPG_452 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309126.1 636901 R 511995 CDS YP_002309127.1 212550810 7039627 639209..639874 1 NC_011565.1 fumarate reductase cytochrome b subunit 639874 7039627 CFPG_453 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 fumarate reductase cytochrome b subunit YP_002309127.1 639209 D 511995 CDS YP_002309128.1 212550811 7039277 639871..641814 1 NC_011565.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 641814 sdhA 7039277 sdhA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 succinate dehydrogenase flavoprotein subunit YP_002309128.1 639871 D 511995 CDS YP_002309129.1 212550812 7040014 641971..642726 1 NC_011565.1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit 642726 7040014 CFPG_455 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_002309129.1 641971 D 511995 CDS YP_002309130.1 212550813 7039509 643432..644031 1 NC_011565.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 644031 7039509 CFPG_456 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_002309130.1 643432 D 511995 CDS YP_002309131.1 212550814 7039148 644021..644728 1 NC_011565.1 cell division protein FtsE 644728 7039148 CFPG_457 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cell division protein FtsE YP_002309131.1 644021 D 511995 CDS YP_002309132.1 212550815 7039163 644728..645876 1 NC_011565.1 diaminopimelate decarboxylase 645876 7039163 CFPG_458 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 diaminopimelate decarboxylase YP_002309132.1 644728 D 511995 CDS YP_002309133.1 212550816 7040026 646157..646876 1 NC_011565.1 hypothetical protein 646876 7040026 CFPG_459 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309133.1 646157 D 511995 CDS YP_002309134.1 212550817 7039192 646998..647546 1 NC_011565.1 dTDP-4-dehydrorhamnose 3,5-epimerase 647546 7039192 CFPG_460 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002309134.1 646998 D 511995 CDS YP_002309135.1 212550818 7039174 647543..648406 1 NC_011565.1 glucose-1-phosphate thymidylyltransferase 648406 7039174 CFPG_461 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glucose-1-phosphate thymidylyltransferase YP_002309135.1 647543 D 511995 CDS YP_002309136.1 212550819 7039160 648665..649780 1 NC_011565.1 dTDP-glucose 4,6-dehydratase 649780 7039160 CFPG_462 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dTDP-glucose 4,6-dehydratase YP_002309136.1 648665 D 511995 CDS YP_002309137.1 212550820 7039205 complement(649820..650335) 1 NC_011565.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 650335 rimM 7039205 rimM Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 16S rRNA-processing protein RimM YP_002309137.1 649820 R 511995 CDS YP_002309138.1 212550821 7039776 complement(650332..651639) 1 NC_011565.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 651639 7039776 CFPG_464 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002309138.1 650332 R 511995 CDS YP_002309139.1 212550822 7039773 complement(651753..652766) 1 NC_011565.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 652766 obgE 7039773 obgE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GTPase ObgE YP_002309139.1 651753 R 511995 CDS YP_002309140.1 212550823 7039215 complement(652777..653352) 1 NC_011565.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 653352 adk 7039215 adk Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 adenylate kinase YP_002309140.1 652777 R 511995 CDS YP_002309141.1 212550824 7039202 complement(653768..654319) 1 NC_011565.1 hypoxanthine phosphoribosyltransferase 654319 7039202 CFPG_467 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypoxanthine phosphoribosyltransferase YP_002309141.1 653768 R 511995 CDS YP_002309142.1 212550825 7039784 complement(654400..656028) 1 NC_011565.1 fumarate hydratase 656028 7039784 CFPG_468 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 fumarate hydratase YP_002309142.1 654400 R 511995 CDS YP_002309143.1 212550826 7039667 complement(656178..658337) 1 NC_011565.1 polynucleotide phosphorylase/polyadenylase 658337 7039667 CFPG_469 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 polynucleotide phosphorylase/polyadenylase YP_002309143.1 656178 R 511995 CDS YP_002309144.1 212550827 7039774 complement(663940..665184) 1 NC_011565.1 hypothetical protein 665184 7039774 CFPG_470 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309144.1 663940 R 511995 CDS YP_002309145.1 212550828 7039182 complement(665515..666420) 1 NC_011565.1 hypothetical protein 666420 7039182 CFPG_471 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309145.1 665515 R 511995 CDS YP_002309146.1 212550829 7039245 complement(666530..667840) 1 NC_011565.1 O-acetylhomoserine (thiol)-lyase 667840 7039245 CFPG_472 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 O-acetylhomoserine (thiol)-lyase YP_002309146.1 666530 R 511995 CDS YP_002309147.1 212550830 7039218 671809..672933 1 NC_011565.1 homocitrate synthase 672933 7039218 CFPG_473 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 homocitrate synthase YP_002309147.1 671809 D 511995 CDS YP_002309148.1 212550831 7039178 673011..674576 1 NC_011565.1 Nif-specific regulatory protein 674576 7039178 CFPG_474 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Nif-specific regulatory protein YP_002309148.1 673011 D 511995 CDS YP_002309149.1 212550832 7039206 674891..676429 1 NC_011565.1 hypothetical protein 676429 7039206 CFPG_475 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309149.1 674891 D 511995 CDS YP_002309150.1 212550833 7039222 676702..678060 1 NC_011565.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase 678060 7039222 CFPG_476 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002309150.1 676702 D 511995 CDS YP_002309151.1 212550834 7039227 678079..679260 1 NC_011565.1 cell division protein FtsW 679260 7039227 CFPG_477 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cell division protein FtsW YP_002309151.1 678079 D 511995 CDS YP_002309152.1 212550835 7039254 681395..681754 1 NC_011565.1 hypothetical protein 681754 7039254 CFPG_478 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309152.1 681395 D 511995 CDS YP_002309153.1 212550836 7039242 681787..683625 1 NC_011565.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 683625 rpsA 7039242 rpsA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S1 YP_002309153.1 681787 D 511995 CDS YP_002309154.1 212550837 7039263 685064..686449 1 NC_011565.1 catalyzes the zinc dependent deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis and catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP in fatty acid biosynthesis; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase 686449 7039263 CFPG_480 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase YP_002309154.1 685064 D 511995 CDS YP_002309155.1 212550838 7039238 686854..687402 1 NC_011565.1 hypothetical protein 687402 7039238 CFPG_481 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309155.1 686854 D 511995 CDS YP_002309156.1 212550839 7039286 complement(687694..688830) 1 NC_011565.1 hypothetical protein 688830 7039286 CFPG_482 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309156.1 687694 R 511995 CDS YP_002309157.1 212550840 7039302 complement(688840..690273) 1 NC_011565.1 hypothetical protein 690273 7039302 CFPG_483 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309157.1 688840 R 511995 CDS YP_002309158.1 212550841 7039275 complement(690279..690581) 1 NC_011565.1 hypothetical protein 690581 7039275 CFPG_484 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309158.1 690279 R 511995 CDS YP_002309159.1 212550842 7039172 691638..692546 1 NC_011565.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 692546 pyrB 7039172 pyrB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartate carbamoyltransferase catalytic subunit YP_002309159.1 691638 D 511995 CDS YP_002309160.1 212550843 7039265 complement(692541..693545) 1 NC_011565.1 UDP-N-acetylmuramate dehydrogenase 693545 7039265 CFPG_486 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 UDP-N-acetylmuramate dehydrogenase YP_002309160.1 692541 R 511995 CDS YP_002309161.1 212550844 7039293 693619..694407 1 NC_011565.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 694407 ksgA 7039293 ksgA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dimethyladenosine transferase YP_002309161.1 693619 D 511995 CDS YP_002309162.1 212550845 7039339 complement(694549..695880) 1 NC_011565.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 695880 7039339 CFPG_488 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 argininosuccinate lyase YP_002309162.1 694549 R 511995 CDS YP_002309163.1 212550846 7039314 complement(696294..696935) 1 NC_011565.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 696935 pyrE 7039314 pyrE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 orotate phosphoribosyltransferase YP_002309163.1 696294 R 511995 CDS YP_002309164.1 212550847 7039782 complement(699099..700448) 1 NC_011565.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 700448 7039782 CFPG_490 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002309164.1 699099 R 511995 CDS YP_002309165.1 212550848 7039320 701200..701562 1 NC_011565.1 hypothetical protein 701562 7039320 CFPG_491 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309165.1 701200 D 511995 CDS YP_002309166.1 212550849 7039372 701731..702696 1 NC_011565.1 geranylgeranyl pyrophosphate synthetase 702696 7039372 CFPG_492 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 geranylgeranyl pyrophosphate synthetase YP_002309166.1 701731 D 511995 CDS YP_002309167.1 212550850 7039355 702863..703633 1 NC_011565.1 deoxyribonuclease 703633 7039355 CFPG_493 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 deoxyribonuclease YP_002309167.1 702863 D 511995 CDS YP_002309168.1 212550851 7039847 complement(705504..706133) 1 NC_011565.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 706133 recR 7039847 recR Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 recombination protein RecR YP_002309168.1 705504 R 511995 CDS YP_002309169.1 212550852 7039352 complement(706216..706962) 1 NC_011565.1 3-oxoacyl-ACP reductase 706962 7039352 CFPG_495 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-oxoacyl-ACP reductase YP_002309169.1 706216 R 511995 CDS YP_002309170.1 212550853 7039836 complement(707328..709610) 1 NC_011565.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 709610 7039836 CFPG_496 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 malic enzyme YP_002309170.1 707328 R 511995 CDS YP_002309171.1 212550854 7039589 709784..714133 1 NC_011565.1 carbamoyl-phosphate synthase 714133 7039589 CFPG_497 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 carbamoyl-phosphate synthase YP_002309171.1 709784 D 511995 CDS YP_002309172.1 212550855 7039375 714217..715338 1 NC_011565.1 hypothetical protein 715338 7039375 CFPG_498 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309172.1 714217 D 511995 CDS YP_002309173.1 212550856 7039392 complement(715519..716748) 1 NC_011565.1 hypothetical protein 716748 7039392 CFPG_499 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309173.1 715519 R 511995 CDS YP_002309174.1 212550857 7039399 complement(716777..717616) 1 NC_011565.1 orotidine-5'-phosphate decarboxylase 717616 7039399 CFPG_500 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 orotidine-5'-phosphate decarboxylase YP_002309174.1 716777 R 511995 CDS YP_002309175.1 212550858 7039394 complement(717637..718716) 1 NC_011565.1 peptide chain release factor 1 718716 7039394 CFPG_501 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 peptide chain release factor 1 YP_002309175.1 717637 R 511995 CDS YP_002309176.1 212550859 7039363 complement(718745..719881) 1 NC_011565.1 glycosyltransferase 719881 7039363 CFPG_502 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glycosyltransferase YP_002309176.1 718745 R 511995 CDS YP_002309177.1 212550860 7039401 complement(720812..721456) 1 NC_011565.1 ribosomal-protein-serine acetyltransferase 721456 7039401 CFPG_503 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribosomal-protein-serine acetyltransferase YP_002309177.1 720812 R 511995 CDS YP_002309178.1 212550861 7039411 complement(721461..723191) 1 NC_011565.1 glucosamine--fructose-6-phosphate aminotransferase 723191 7039411 CFPG_504 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glucosamine--fructose-6-phosphate aminotransferase YP_002309178.1 721461 R 511995 CDS YP_002309179.1 212550862 7039424 723475..725424 1 NC_011565.1 glycogen debranching protein 725424 7039424 CFPG_505 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glycogen debranching protein YP_002309179.1 723475 D 511995 CDS YP_002309180.1 212550863 7039322 725450..726706 1 NC_011565.1 glycogen synthase 726706 7039322 CFPG_506 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glycogen synthase YP_002309180.1 725450 D 511995 CDS YP_002309181.1 212550864 7039827 729471..730760 1 NC_011565.1 alpha-amylase 730760 7039827 CFPG_507 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 alpha-amylase YP_002309181.1 729471 D 511995 CDS YP_002309182.1 212550865 7039425 731209..731814 1 NC_011565.1 hypothetical protein 731814 7039425 CFPG_508 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309182.1 731209 D 511995 CDS YP_002309183.1 212550866 7039787 complement(731821..732315) 1 NC_011565.1 dihydrofolate reductase 732315 7039787 CFPG_509 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydrofolate reductase YP_002309183.1 731821 R 511995 CDS YP_002309184.1 212550867 7039477 complement(732361..733131) 1 NC_011565.1 thymidylate synthase 733131 7039477 CFPG_510 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thymidylate synthase YP_002309184.1 732361 R 511995 CDS YP_002309185.1 212550868 7039488 733374..734360 1 NC_011565.1 peptide chain release factor 2 734360 7039488 CFPG_511 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 peptide chain release factor 2 YP_002309185.1 733374 D 511995 CDS YP_002309186.1 212550869 7039440 734645..735988 1 NC_011565.1 Na+-driven multidrug efflux pump NorM 735988 7039440 CFPG_512 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Na+-driven multidrug efflux pump NorM YP_002309186.1 734645 D 511995 CDS YP_002309187.1 212550870 7039395 736149..737627 1 NC_011565.1 xylulokinase 737627 7039395 CFPG_513 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 xylulokinase YP_002309187.1 736149 D 511995 CDS YP_002309188.1 212550871 7039450 737756..739081 1 NC_011565.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 739081 7039450 CFPG_514 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 xylose isomerase YP_002309188.1 737756 D 511995 CDS YP_002309189.1 212550872 7039441 739132..740565 1 NC_011565.1 xylose/proton symporter; member of the major facilitator superfamily (MFS) of transporter; D-xylose transporter XylE 740565 xylE 7039441 xylE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 D-xylose transporter XylE YP_002309189.1 739132 D 511995 CDS YP_002309190.1 212550873 7039343 complement(741677..743602) 1 NC_011565.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 743602 dnaK 7039343 dnaK Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molecular chaperone DnaK YP_002309190.1 741677 R 511995 CDS YP_002309191.1 212550874 7039487 complement(743825..746443) 1 NC_011565.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 746443 alaS 7039487 alaS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 alanyl-tRNA synthetase YP_002309191.1 743825 R 511995 CDS YP_002309192.1 212550875 7039436 746565..746939 1 NC_011565.1 HTH-type transcriptional regulator 746939 7039436 CFPG_518 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 HTH-type transcriptional regulator YP_002309192.1 746565 D 511995 CDS YP_002309193.1 212550876 7039475 complement(746970..747821) 1 NC_011565.1 pyridoxine kinase 747821 7039475 CFPG_519 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 pyridoxine kinase YP_002309193.1 746970 R 511995 CDS YP_002309194.1 212550877 7039489 748156..749319 1 NC_011565.1 phosphoribosylformylglycinamidine cyclo-ligase 749319 7039489 CFPG_520 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoribosylformylglycinamidine cyclo-ligase YP_002309194.1 748156 D 511995 CDS YP_002309195.1 212550878 7039494 complement(750168..752363) 1 NC_011565.1 glutamine synthetase 752363 7039494 CFPG_521 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glutamine synthetase YP_002309195.1 750168 R 511995 CDS YP_002309196.1 212550879 7039567 complement(752662..753687) 1 NC_011565.1 UDP-glucose 4-epimerase 753687 7039567 CFPG_522 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 UDP-glucose 4-epimerase YP_002309196.1 752662 R 511995 CDS YP_002309197.1 212550880 7039536 753846..755372 1 NC_011565.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 755372 purH 7039536 purH Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002309197.1 753846 D 511995 CDS YP_002309198.1 212550881 7039481 755379..756398 1 NC_011565.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 756398 7039481 CFPG_524 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 rod shape-determining protein MreB YP_002309198.1 755379 D 511995 CDS YP_002309199.1 212550882 7039510 756399..757244 1 NC_011565.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 757244 7039510 CFPG_525 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 rod shape-determining protein MreC YP_002309199.1 756399 D 511995 CDS YP_002309200.1 212550883 7039560 757259..757777 1 NC_011565.1 hypothetical protein 757777 7039560 CFPG_526 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309200.1 757259 D 511995 CDS YP_002309201.1 212550884 7039539 757797..759650 1 NC_011565.1 penicillin-binding protein 2 759650 7039539 CFPG_527 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 penicillin-binding protein 2 YP_002309201.1 757797 D 511995 CDS YP_002309202.1 212550885 7039616 759631..761112 1 NC_011565.1 rod shape-determining protein RodA 761112 7039616 CFPG_528 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 rod shape-determining protein RodA YP_002309202.1 759631 D 511995 CDS YP_002309203.1 212550886 7039793 761342..761740 1 NC_011565.1 methylmalonyl-CoA epimerase 761740 7039793 CFPG_529 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methylmalonyl-CoA epimerase YP_002309203.1 761342 D 511995 CDS YP_002309204.1 212550887 7039579 761812..763365 1 NC_011565.1 methylmalonyl-CoA decarboxylase alpha subunit 763365 7039579 CFPG_530 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methylmalonyl-CoA decarboxylase alpha subunit YP_002309204.1 761812 D 511995 CDS YP_002309205.1 212550888 7039602 763395..764357 1 NC_011565.1 hypothetical protein 764357 7039602 CFPG_531 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309205.1 763395 D 511995 CDS YP_002309206.1 212550889 7039577 764354..764770 1 NC_011565.1 methylmalonyl-CoA decarboxylase gamma subunit 764770 7039577 CFPG_532 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methylmalonyl-CoA decarboxylase gamma subunit YP_002309206.1 764354 D 511995 CDS YP_002309207.1 212550890 7039789 764775..765929 1 NC_011565.1 Na+-transporting methylmalonyl-CoA decarboxylase beta subunit 765929 7039789 CFPG_533 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Na+-transporting methylmalonyl-CoA decarboxylase beta subunit YP_002309207.1 764775 D 511995 CDS YP_002309208.1 212550891 7039796 766157..766453 1 NC_011565.1 RNA-binding protein RbpA 766453 7039796 CFPG_534 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RNA-binding protein RbpA YP_002309208.1 766157 D 511995 CDS YP_002309209.1 212550892 7039551 768186..769175 1 NC_011565.1 1,4-dihydroxy-2-naphthoate octaprenyltransferase 769175 7039551 CFPG_535 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_002309209.1 768186 D 511995 CDS YP_002309210.1 212550893 7039581 769552..769866 1 NC_011565.1 50S ribosomal protein L21 769866 rplU 7039581 rplU Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L21 YP_002309210.1 769552 D 511995 CDS YP_002309211.1 212550894 7039568 769886..770143 1 NC_011565.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 770143 rpmA 7039568 rpmA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L27 YP_002309211.1 769886 D 511995 CDS YP_002309212.1 212550895 7039546 770479..771753 1 NC_011565.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 771753 7039546 CFPG_538 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 seryl-tRNA synthetase YP_002309212.1 770479 D 511995 CDS YP_002309213.1 212550896 7039576 complement(771762..772460) 1 NC_011565.1 global nitrogen regulator NtcA 772460 7039576 CFPG_539 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 global nitrogen regulator NtcA YP_002309213.1 771762 R 511995 CDS YP_002309214.1 212550897 7039570 772775..773434 1 NC_011565.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 773434 7039570 CFPG_540 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphatidylserine decarboxylase YP_002309214.1 772775 D 511995 CDS YP_002309215.1 212550898 7039645 complement(773476..775284) 1 NC_011565.1 excinuclease ABC subunit C 775284 7039645 CFPG_541 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 excinuclease ABC subunit C YP_002309215.1 773476 R 511995 CDS YP_002309216.1 212550899 7039631 complement(777929..779161) 1 NC_011565.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 779161 clpX 7039631 clpX Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent protease ATP-binding subunit ClpX YP_002309216.1 777929 R 511995 CDS YP_002309217.1 212550900 7039805 complement(779164..779832) 1 NC_011565.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 779832 7039805 CFPG_543 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent Clp protease proteolytic subunit YP_002309217.1 779164 R 511995 CDS YP_002309218.1 212550901 7039271 complement(779855..781183) 1 NC_011565.1 trigger factor 781183 7039271 CFPG_544 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 trigger factor YP_002309218.1 779855 R 511995 CDS YP_002309219.1 212550902 7039176 782754..783578 1 NC_011565.1 nitrogenase iron protein NifH 783578 7039176 CFPG_545 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogenase iron protein NifH YP_002309219.1 782754 D 511995 CDS YP_002309220.1 212550903 7039281 783813..784136 1 NC_011565.1 nitrogen regulatory protein P-II 1 784136 7039281 CFPG_546 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogen regulatory protein P-II 1 YP_002309220.1 783813 D 511995 CDS YP_002309221.1 212550904 7039762 784139..784510 1 NC_011565.1 nitrogen regulatory protein P-II 2 784510 7039762 CFPG_547 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogen regulatory protein P-II 2 YP_002309221.1 784139 D 511995 CDS YP_002309222.1 212550905 7039764 784554..786206 1 NC_011565.1 nitrogenase molybdenum-iron protein alpha subunit 786206 7039764 CFPG_548 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogenase molybdenum-iron protein alpha subunit YP_002309222.1 784554 D 511995 CDS YP_002309223.1 212550906 7039775 786230..787612 1 NC_011565.1 nitrogenase molybdenum-iron protein beta subunit 1 787612 7039775 CFPG_549 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogenase molybdenum-iron protein beta subunit 1 YP_002309223.1 786230 D 511995 CDS YP_002309224.1 212550907 7039768 787623..788966 1 NC_011565.1 nitrogenase molybdenum-iron cofactor biosynthesis protein NifE 788966 7039768 CFPG_550 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogenase molybdenum-iron cofactor biosynthesis protein NifE YP_002309224.1 787623 D 511995 CDS YP_002309225.1 212550908 7039778 788963..790426 1 NC_011565.1 nitrogenase molybdenum-iron protein beta subunit 2 790426 7039778 CFPG_551 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogenase molybdenum-iron protein beta subunit 2 YP_002309225.1 788963 D 511995 CDS YP_002309226.1 212550909 7039212 790452..791711 1 NC_011565.1 nitrogenase molybdenum-cofactor biosynthesis protein NifB 791711 7039212 CFPG_552 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogenase molybdenum-cofactor biosynthesis protein NifB YP_002309226.1 790452 D 511995 CDS YP_002309227.1 212550910 7039767 791885..792187 1 NC_011565.1 2Fe-2S ferredoxin 792187 7039767 CFPG_553 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2Fe-2S ferredoxin YP_002309227.1 791885 D 511995 CDS YP_002309228.1 212550911 7039766 complement(793485..796781) 1 NC_011565.1 hypothetical protein 796781 7039766 CFPG_554 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309228.1 793485 R 511995 CDS YP_002309229.1 212550912 7039318 797966..798820 1 NC_011565.1 deoxyribose-phosphate aldolase 798820 7039318 CFPG_555 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 deoxyribose-phosphate aldolase YP_002309229.1 797966 D 511995 CDS YP_002309230.1 212550913 7039400 complement(799242..799871) 1 NC_011565.1 membrane-associated phospholipid phosphatase 799871 7039400 CFPG_556 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 membrane-associated phospholipid phosphatase YP_002309230.1 799242 R 511995 CDS YP_002309231.1 212550914 7039433 complement(799864..802017) 1 NC_011565.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 802017 7039433 CFPG_557 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methylmalonyl-CoA mutase YP_002309231.1 799864 R 511995 CDS YP_002309232.1 212550915 7039456 complement(802028..803893) 1 NC_011565.1 cobalamin-dependent methylmalonyl-CoA mutase large subunit 803893 7039456 CFPG_558 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cobalamin-dependent methylmalonyl-CoA mutase large subunit YP_002309232.1 802028 R 511995 CDS YP_002309233.1 212550916 7039429 804116..804745 1 NC_011565.1 LysE-like exporter 804745 7039429 CFPG_559 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 LysE-like exporter YP_002309233.1 804116 D 511995 CDS YP_002309234.1 212550917 7039624 804803..805102 1 NC_011565.1 hypothetical protein 805102 7039624 CFPG_560 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309234.1 804803 D 511995 CDS YP_002309235.1 212550918 7039473 806133..807575 1 NC_011565.1 peptidyl-prolyl cis-trans isomerase SurA 807575 7039473 CFPG_561 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 peptidyl-prolyl cis-trans isomerase SurA YP_002309235.1 806133 D 511995 CDS YP_002309236.1 212550919 7039341 complement(807638..808327) 1 NC_011565.1 methyltransferase 808327 7039341 CFPG_562 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methyltransferase YP_002309236.1 807638 R 511995 CDS YP_002309237.1 212550920 7039406 complement(809005..810678) 1 NC_011565.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 810678 7039406 CFPG_563 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 diphosphate--fructose-6-phosphate 1-phosphotransferase YP_002309237.1 809005 R 511995 CDS YP_002309238.1 212550921 7039300 816379..816822 1 NC_011565.1 hypothetical protein 816822 7039300 CFPG_564 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309238.1 816379 D 511995 CDS YP_002309239.1 212550922 7039350 817802..818887 1 NC_011565.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 818887 7039350 CFPG_565 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-isopropylmalate dehydrogenase YP_002309239.1 817802 D 511995 CDS YP_002309240.1 212550923 7039331 818884..819855 1 NC_011565.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 819855 7039331 CFPG_566 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002309240.1 818884 D 511995 CDS YP_002309241.1 212550924 7039786 819837..820589 1 NC_011565.1 shikimate 5-dehydrogenase 820589 7039786 CFPG_567 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 shikimate 5-dehydrogenase YP_002309241.1 819837 D 511995 CDS YP_002309242.1 212550925 7039462 820985..822331 1 NC_011565.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 822331 7039462 CFPG_568 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 adenylosuccinate lyase YP_002309242.1 820985 D 511995 CDS YP_002309243.1 212550926 7039525 822431..823303 1 NC_011565.1 ribosomal large subunit pseudouridine synthase B 823303 7039525 CFPG_569 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribosomal large subunit pseudouridine synthase B YP_002309243.1 822431 D 511995 CDS YP_002309244.1 212550927 7039797 823314..824708 1 NC_011565.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 824708 asnC 7039797 asnC Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 asparaginyl-tRNA synthetase YP_002309244.1 823314 D 511995 CDS YP_002309245.1 212550928 7039474 825012..826217 1 NC_011565.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 826217 7039474 CFPG_571 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 L,L-diaminopimelate aminotransferase YP_002309245.1 825012 D 511995 CDS YP_002309246.1 212550929 7039795 826678..828195 1 NC_011565.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 828195 guaA 7039795 guaA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GMP synthase YP_002309246.1 826678 D 511995 CDS YP_002309247.1 212550930 7039542 831459..833981 1 NC_011565.1 outer membrane protein assembly factor YaeT 833981 7039542 CFPG_573 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 outer membrane protein assembly factor YaeT YP_002309247.1 831459 D 511995 CDS YP_002309248.1 212550931 7039804 834648..835214 1 NC_011565.1 OmpH-like outer membrane protein 835214 7039804 CFPG_574 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 OmpH-like outer membrane protein YP_002309248.1 834648 D 511995 CDS YP_002309249.1 212550932 7039800 835245..836075 1 NC_011565.1 glutamate racemase 836075 7039800 CFPG_575 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glutamate racemase YP_002309249.1 835245 D 511995 CDS YP_002309250.1 212550933 7039662 837638..838081 1 NC_011565.1 hypothetical protein 838081 7039662 CFPG_576 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309250.1 837638 D 511995 CDS YP_002309251.1 212550934 7039508 838167..838949 1 NC_011565.1 dihydroorotate dehydrogenase electron transfer subunit 838949 7039508 CFPG_577 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydroorotate dehydrogenase electron transfer subunit YP_002309251.1 838167 D 511995 CDS YP_002309252.1 212550935 7039414 838937..839845 1 NC_011565.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 839845 7039414 CFPG_578 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dihydroorotate dehydrogenase 1B YP_002309252.1 838937 D 511995 CDS YP_002309253.1 212550936 7039554 841183..842502 1 NC_011565.1 signal recognition particle protein 842502 7039554 CFPG_579 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 signal recognition particle protein YP_002309253.1 841183 D 511995 CDS YP_002309254.1 212550937 7039907 842513..844975 1 NC_011565.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 844975 pheT 7039907 pheT Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phenylalanyl-tRNA synthetase subunit beta YP_002309254.1 842513 D 511995 CDS YP_002309255.1 212550938 7039943 complement(845407..846939) 1 NC_011565.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 846939 7039943 CFPG_581 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoglyceromutase YP_002309255.1 845407 R 511995 CDS YP_002309256.1 212550939 7039936 complement(847157..848641) 1 NC_011565.1 NADPH-dependent glutamate synthase small subunit 848641 7039936 CFPG_582 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NADPH-dependent glutamate synthase small subunit YP_002309256.1 847157 R 511995 CDS YP_002309257.1 212550940 7039986 complement(848670..849452) 1 NC_011565.1 ferredoxin-NADP(+) reductase subunit alpha 849452 7039986 CFPG_583 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ferredoxin-NADP(+) reductase subunit alpha YP_002309257.1 848670 R 511995 CDS YP_002309258.1 212550941 7039991 849937..850860 1 NC_011565.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 850860 miaA 7039991 miaA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002309258.1 849937 D 511995 CDS YP_002309259.1 212550942 7039967 complement(850857..851297) 1 NC_011565.1 cytosine/adenosine deaminase 851297 7039967 CFPG_585 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cytosine/adenosine deaminase YP_002309259.1 850857 R 511995 CDS YP_002309260.1 212550943 7039921 851496..851864 1 NC_011565.1 hypothetical protein 851864 7039921 CFPG_586 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309260.1 851496 D 511995 CDS YP_002309261.1 212550944 7039925 851861..853825 1 NC_011565.1 cell division protease FtsH 853825 7039925 CFPG_587 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cell division protease FtsH YP_002309261.1 851861 D 511995 CDS YP_002309262.1 212550945 7039931 853897..854781 1 NC_011565.1 phosphatidate cytidylyltransferase 854781 7039931 CFPG_588 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphatidate cytidylyltransferase YP_002309262.1 853897 D 511995 CDS YP_002309263.1 212550946 7039862 854797..856311 1 NC_011565.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 856311 7039862 CFPG_589 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-isopropylmalate synthase YP_002309263.1 854797 D 511995 CDS YP_002309264.1 212550947 7039802 856327..857724 1 NC_011565.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 857724 7039802 CFPG_590 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 isopropylmalate isomerase large subunit YP_002309264.1 856327 D 511995 CDS YP_002309265.1 212550948 7039945 857767..858360 1 NC_011565.1 3-isopropylmalate dehydratase small subunit 858360 7039945 CFPG_591 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-isopropylmalate dehydratase small subunit YP_002309265.1 857767 D 511995 CDS YP_002309266.1 212550949 7039988 858350..859861 1 NC_011565.1 D-citramalate synthase 859861 7039988 CFPG_592 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 D-citramalate synthase YP_002309266.1 858350 D 511995 CDS YP_002309267.1 212550950 7039841 complement(859885..861477) 1 NC_011565.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 861477 7039841 CFPG_593 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoenolpyruvate carboxykinase YP_002309267.1 859885 R 511995 CDS YP_002309268.1 212550951 7039783 complement(861676..862257) 1 NC_011565.1 Ham1-like deoxyribonucleotide triphosphate pyrophosphatase 862257 7039783 CFPG_594 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Ham1-like deoxyribonucleotide triphosphate pyrophosphatase YP_002309268.1 861676 R 511995 CDS YP_002309269.1 212550952 7039961 complement(863273..864565) 1 NC_011565.1 UDP-glucose 6-dehydrogenase 864565 7039961 CFPG_595 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 UDP-glucose 6-dehydrogenase YP_002309269.1 863273 R 511995 CDS YP_002309270.1 212550953 7039941 865087..865716 1 NC_011565.1 glucose inhibited division protein B 865716 7039941 CFPG_596 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glucose inhibited division protein B YP_002309270.1 865087 D 511995 CDS YP_002309271.1 212550954 7039948 complement(865771..866340) 1 NC_011565.1 SUA5 family translation factor 866340 7039948 CFPG_597 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 SUA5 family translation factor YP_002309271.1 865771 R 511995 CDS YP_002309272.1 212550955 7039939 complement(866363..867214) 1 NC_011565.1 nicotinate-nucleotide pyrophosphorylase 867214 7039939 CFPG_598 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nicotinate-nucleotide pyrophosphorylase YP_002309272.1 866363 R 511995 CDS YP_002309273.1 212550956 7039959 complement(867220..868494) 1 NC_011565.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 868494 7039959 CFPG_599 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 S-adenosylmethionine synthetase YP_002309273.1 867220 R 511995 CDS YP_002309274.1 212550957 7039924 complement(868678..870504) 1 NC_011565.1 voltage-gated ClC-type chloride channel 870504 7039924 CFPG_600 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 voltage-gated ClC-type chloride channel YP_002309274.1 868678 R 511995 CDS YP_002309275.1 212550958 7039918 complement(870473..874159) 1 NC_011565.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 874159 7039918 CFPG_601 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoribosylformylglycinamidine synthase YP_002309275.1 870473 R 511995 CDS YP_002309276.1 212550959 7039938 874316..875965 1 NC_011565.1 small conductance mechanosensitive ion channel 875965 7039938 CFPG_602 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 small conductance mechanosensitive ion channel YP_002309276.1 874316 D 511995 CDS YP_002309277.1 212550960 7039981 complement(877541..877945) 1 NC_011565.1 thioesterase 877945 7039981 CFPG_603 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thioesterase YP_002309277.1 877541 R 511995 CDS YP_002309278.1 212550961 7039963 complement(877953..879200) 1 NC_011565.1 collagenase-like family U32 peptidase 879200 7039963 CFPG_604 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 collagenase-like family U32 peptidase YP_002309278.1 877953 R 511995 CDS YP_002309279.1 212550962 7039903 879641..881356 1 NC_011565.1 acetolactate synthase large subunit 881356 7039903 CFPG_605 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acetolactate synthase large subunit YP_002309279.1 879641 D 511995 CDS YP_002309280.1 212550963 7039901 881346..881891 1 NC_011565.1 acetolactate synthase small subunit 881891 7039901 CFPG_606 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acetolactate synthase small subunit YP_002309280.1 881346 D 511995 CDS YP_002309281.1 212550964 7039771 complement(882028..882771) 1 NC_011565.1 23S rRNA (guanosine-2'-O-)-methyltransferase 882771 7039771 CFPG_607 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 23S rRNA (guanosine-2'-O-)-methyltransferase YP_002309281.1 882028 R 511995 CDS YP_002309282.1 212550965 7039865 complement(884969..886309) 1 NC_011565.1 DNA recombination protein rmuC-like protein 886309 7039865 CFPG_608 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA recombination protein rmuC-like protein YP_002309282.1 884969 R 511995 CDS YP_002309283.1 212550966 7039872 complement(886382..887578) 1 NC_011565.1 phosphopantothenoylcysteine decarboxylase 887578 7039872 CFPG_609 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphopantothenoylcysteine decarboxylase YP_002309283.1 886382 R 511995 CDS YP_002309284.1 212550967 7039856 887666..888046 1 NC_011565.1 YjgF-like translation initiation inhibitor 888046 7039856 CFPG_610 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 YjgF-like translation initiation inhibitor YP_002309284.1 887666 D 511995 CDS YP_002309285.1 212550968 7039880 888236..890467 1 NC_011565.1 ATP-dependent DNA helicase II 890467 7039880 CFPG_611 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ATP-dependent DNA helicase II YP_002309285.1 888236 D 511995 CDS YP_002309286.1 212550969 7039781 complement(890623..891900) 1 NC_011565.1 ammonium transporter 891900 7039781 CFPG_612 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ammonium transporter YP_002309286.1 890623 R 511995 CDS YP_002309287.1 212550970 7039833 complement(891925..892272) 1 NC_011565.1 nitrogen regulatory protein P-II 3 892272 7039833 CFPG_613 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 nitrogen regulatory protein P-II 3 YP_002309287.1 891925 R 511995 CDS YP_002309288.1 212550971 7039992 complement(892703..893494) 1 NC_011565.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 893494 surE 7039992 surE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 stationary phase survival protein SurE YP_002309288.1 892703 R 511995 CDS YP_002309289.1 212550972 7039780 complement(893742..895718) 1 NC_011565.1 glucosamine-6-phosphate deaminase 895718 7039780 CFPG_615 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glucosamine-6-phosphate deaminase YP_002309289.1 893742 R 511995 CDS YP_002309290.1 212550973 7039889 complement(895828..896748) 1 NC_011565.1 N-carbamoylputrescine amidase 896748 7039889 CFPG_616 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 N-carbamoylputrescine amidase YP_002309290.1 895828 R 511995 CDS YP_002309291.1 212550974 7039884 complement(896745..897767) 1 NC_011565.1 agmatine deiminase 897767 7039884 CFPG_617 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 agmatine deiminase YP_002309291.1 896745 R 511995 CDS YP_002309292.1 212550975 7039985 897978..898859 1 NC_011565.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 898859 7039985 CFPG_618 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002309292.1 897978 D 511995 CDS YP_002309293.1 212550976 7039984 898856..901687 1 NC_011565.1 excinuclease ABC subunit A 901687 7039984 CFPG_619 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 excinuclease ABC subunit A YP_002309293.1 898856 D 511995 CDS YP_002309294.1 212550977 7039911 complement(901800..903026) 1 NC_011565.1 GTP-binding protein HflX 903026 7039911 CFPG_620 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GTP-binding protein HflX YP_002309294.1 901800 R 511995 CDS YP_002309295.1 212550978 7039815 903152..904768 1 NC_011565.1 amino acid transporter 904768 7039815 CFPG_621 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 amino acid transporter YP_002309295.1 903152 D 511995 CDS YP_002309296.1 212550979 7039899 904828..905289 1 NC_011565.1 methylated-DNA-[protein]-cysteine S-methyltransferase 905289 7039899 CFPG_622 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 methylated-DNA-[protein]-cysteine S-methyltransferase YP_002309296.1 904828 D 511995 CDS YP_002309297.1 212550980 7039792 complement(905326..907929) 1 NC_011565.1 ribonucleoside-diphosphate reductase subunit alpha 907929 7039792 CFPG_623 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribonucleoside-diphosphate reductase subunit alpha YP_002309297.1 905326 R 511995 CDS YP_002309298.1 212550981 7039905 complement(907919..909280) 1 NC_011565.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 909280 pgi 7039905 pgi Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glucose-6-phosphate isomerase YP_002309298.1 907919 R 511995 CDS YP_002309299.1 212550982 7039933 complement(909297..910292) 1 NC_011565.1 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 910292 7039933 CFPG_625 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NAD(P)-dependent glycerol-3-phosphate dehydrogenase YP_002309299.1 909297 R 511995 CDS YP_002309300.1 212550983 7039803 complement(910309..911811) 1 NC_011565.1 lysyl-tRNA synthetase 911811 7039803 CFPG_626 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 lysyl-tRNA synthetase YP_002309300.1 910309 R 511995 CDS YP_002309301.1 212550984 7039801 complement(911896..912996) 1 NC_011565.1 DNA replication and repair protein RecF 912996 7039801 CFPG_627 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA replication and repair protein RecF YP_002309301.1 911896 R 511995 CDS YP_002309302.1 212550985 7039625 913181..915172 1 NC_011565.1 NAD-dependent DNA ligase 915172 7039625 CFPG_628 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 NAD-dependent DNA ligase YP_002309302.1 913181 D 511995 CDS YP_002309303.1 212550986 7039799 complement(915177..916592) 1 NC_011565.1 DNA polymerase III subunit gamma and tau 916592 7039799 CFPG_629 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA polymerase III subunit gamma and tau YP_002309303.1 915177 R 511995 CDS YP_002309304.1 212550987 7039983 916700..916918 1 NC_011565.1 hypothetical protein 916918 7039983 CFPG_630 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309304.1 916700 D 511995 CDS YP_002309305.1 212550988 7039927 complement(917450..918262) 1 NC_011565.1 phosphomethylpyrimidine kinase 918262 7039927 CFPG_631 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphomethylpyrimidine kinase YP_002309305.1 917450 R 511995 CDS YP_002309306.1 212550989 7039305 complement(918249..919964) 1 NC_011565.1 thiamine biosynthesis protein ThiC 919964 7039305 CFPG_632 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thiamine biosynthesis protein ThiC YP_002309306.1 918249 R 511995 CDS YP_002309307.1 212550990 7039386 complement(920286..923042) 1 NC_011565.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 923042 leuS 7039386 leuS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 leucyl-tRNA synthetase YP_002309307.1 920286 R 511995 CDS YP_002309308.1 212550991 7039971 923754..925211 1 NC_011565.1 Fe-S cluster assembly protein SufB 925211 7039971 CFPG_634 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Fe-S cluster assembly protein SufB YP_002309308.1 923754 D 511995 CDS YP_002309309.1 212550992 7039639 complement(925214..925981) 1 NC_011565.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 925981 7039639 CFPG_635 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002309309.1 925214 R 511995 CDS YP_002309310.1 212550993 7039167 926068..927459 1 NC_011565.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 927459 7039167 CFPG_636 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartate kinase YP_002309310.1 926068 D 511995 CDS YP_002309311.1 212550994 7039665 927541..929307 1 NC_011565.1 phosphomannomutase 929307 7039665 CFPG_637 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphomannomutase YP_002309311.1 927541 D 511995 CDS YP_002309312.1 212550995 7040022 929358..930110 1 NC_011565.1 Fe-S cluster assembly protein SufC 930110 7040022 CFPG_638 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Fe-S cluster assembly protein SufC YP_002309312.1 929358 D 511995 CDS YP_002309313.1 212550996 7039651 930094..931443 1 NC_011565.1 Fe-S cluster assembly protein SufD 931443 7039651 CFPG_639 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Fe-S cluster assembly protein SufD YP_002309313.1 930094 D 511995 CDS YP_002309314.1 212550997 7039654 931431..932669 1 NC_011565.1 selenocysteine lyase/cysteine desulfurase 932669 7039654 CFPG_640 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 selenocysteine lyase/cysteine desulfurase YP_002309314.1 931431 D 511995 CDS YP_002309315.1 212550998 7039647 932698..934446 1 NC_011565.1 DNA mismatch repair protein MutL 934446 7039647 CFPG_641 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA mismatch repair protein MutL YP_002309315.1 932698 D 511995 CDS YP_002309316.1 212550999 7039660 934443..935147 1 NC_011565.1 phosphatidylserine synthase 935147 7039660 CFPG_642 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphatidylserine synthase YP_002309316.1 934443 D 511995 CDS YP_002309317.1 212551000 7039388 935182..937113 1 NC_011565.1 cadmium efflux ATPase 937113 7039388 CFPG_643 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cadmium efflux ATPase YP_002309317.1 935182 D 511995 CDS YP_002309318.1 212551001 7039843 937200..938324 1 NC_011565.1 DNA polymerase III subunit beta 938324 7039843 CFPG_644 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA polymerase III subunit beta YP_002309318.1 937200 D 511995 CDS YP_002309319.1 212551002 7039617 938321..939097 1 NC_011565.1 DNA polymerase III epsilon subunit 939097 7039617 CFPG_645 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA polymerase III epsilon subunit YP_002309319.1 938321 D 511995 CDS YP_002309320.1 212551003 7039603 complement(939113..940564) 1 NC_011565.1 hexuronate transporter 940564 7039603 CFPG_646 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hexuronate transporter YP_002309320.1 939113 R 511995 CDS YP_002309321.1 212551004 7039572 complement(940602..941234) 1 NC_011565.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 941234 7039572 CFPG_647 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_002309321.1 940602 R 511995 CDS YP_002309322.1 212551005 7039571 complement(941304..942350) 1 NC_011565.1 2-dehydro-3-deoxygluconokinase 942350 7039571 CFPG_648 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-dehydro-3-deoxygluconokinase YP_002309322.1 941304 R 511995 CDS YP_002309323.1 212551006 7039558 942460..943029 1 NC_011565.1 hypothetical protein 943029 7039558 CFPG_649 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309323.1 942460 D 511995 CDS YP_002309324.1 212551007 7039527 943040..943501 1 NC_011565.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 943501 smpB 7039527 smpB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 SsrA-binding protein YP_002309324.1 943040 D 511995 CDS YP_002309325.1 212551008 7039541 complement(943859..944317) 1 NC_011565.1 involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 944317 7039541 CFPG_651 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartate carbamoyltransferase regulatory subunit YP_002309325.1 943859 R 511995 CDS YP_002309326.1 212551009 7039513 complement(944601..945179) 1 NC_011565.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 945179 folE 7039513 folE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GTP cyclohydrolase I YP_002309326.1 944601 R 511995 CDS YP_002309327.1 212551010 7039540 complement(945687..946115) 1 NC_011565.1 hypothetical protein 946115 7039540 CFPG_653 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309327.1 945687 R 511995 CDS YP_002309328.1 212551011 7039550 complement(946137..946892) 1 NC_011565.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 946892 tpiA 7039550 tpiA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 triosephosphate isomerase YP_002309328.1 946137 R 511995 CDS YP_002309329.1 212551012 7039580 complement(946908..947972) 1 NC_011565.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 947972 7039580 CFPG_655 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 chorismate synthase YP_002309329.1 946908 R 511995 CDS YP_002309330.1 212551013 7039607 complement(948022..949197) 1 NC_011565.1 aminotransferase B 949197 7039607 CFPG_656 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aminotransferase B YP_002309330.1 948022 R 511995 CDS YP_002309331.1 212551014 7039498 949699..952146 1 NC_011565.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 952146 thrA 7039498 thrA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 bifunctional aspartokinase I/homoserine dehydrogenase I YP_002309331.1 949699 D 511995 CDS YP_002309332.1 212551015 7039466 952292..953500 1 NC_011565.1 catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 953500 7039466 CFPG_658 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 cofactor-independent phosphoglycerate mutase YP_002309332.1 952292 D 511995 CDS YP_002309333.1 212551016 7039476 953603..954916 1 NC_011565.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 954916 7039476 CFPG_659 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 threonine synthase YP_002309333.1 953603 D 511995 CDS YP_002309334.1 212551017 7039457 956168..957601 1 NC_011565.1 molybdenum ABC transporter ATP-binding protein 957601 7039457 CFPG_660 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 molybdenum ABC transporter ATP-binding protein YP_002309334.1 956168 D 511995 CDS YP_002309335.1 212551018 7039459 complement(957644..960208) 1 NC_011565.1 glycogen phosphorylase 960208 7039459 CFPG_661 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glycogen phosphorylase YP_002309335.1 957644 R 511995 CDS YP_002309336.1 212551019 7039421 complement(960235..961890) 1 NC_011565.1 glycogen synthase 961890 7039421 CFPG_662 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glycogen synthase YP_002309336.1 960235 R 511995 CDS YP_002309337.1 212551020 7039460 961995..962783 1 NC_011565.1 amidohydrolase 962783 7039460 CFPG_663 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 amidohydrolase YP_002309337.1 961995 D 511995 CDS YP_002309338.1 212551021 7039404 complement(962919..964817) 1 NC_011565.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 964817 7039404 CFPG_664 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 1-deoxy-D-xylulose-5-phosphate synthase YP_002309338.1 962919 R 511995 CDS YP_002309339.1 212551022 7039437 complement(965070..966494) 1 NC_011565.1 tRNA nucleotidyltransferase 966494 7039437 CFPG_665 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 tRNA nucleotidyltransferase YP_002309339.1 965070 R 511995 CDS YP_002309340.1 212551023 7039396 967105..967725 1 NC_011565.1 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 967725 7039396 CFPG_666 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YP_002309340.1 967105 D 511995 CDS YP_002309341.1 212551024 7039439 967758..968261 1 NC_011565.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 968261 7039439 CFPG_667 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002309341.1 967758 D 511995 CDS YP_002309342.1 212551025 7040016 969198..970070 1 NC_011565.1 electron transfer flavoprotein subunit beta 970070 7040016 CFPG_668 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 electron transfer flavoprotein subunit beta YP_002309342.1 969198 D 511995 CDS YP_002309343.1 212551026 7039211 970074..971093 1 NC_011565.1 electron transfer flavoprotein alpha subunit 971093 7039211 CFPG_669 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 electron transfer flavoprotein alpha subunit YP_002309343.1 970074 D 511995 CDS YP_002309344.1 212551027 7040013 971233..972942 1 NC_011565.1 acyl-CoA dehydrogenase 972942 7040013 CFPG_670 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acyl-CoA dehydrogenase YP_002309344.1 971233 D 511995 CDS YP_002309345.1 212551028 7039463 complement(974037..974441) 1 NC_011565.1 hypothetical protein 974441 7039463 CFPG_671 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309345.1 974037 R 511995 CDS YP_002309346.1 212551029 7039486 complement(976930..977331) 1 NC_011565.1 hypothetical protein 977331 7039486 CFPG_672 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309346.1 976930 R 511995 CDS YP_002309347.1 212551030 7039390 980212..980835 1 NC_011565.1 serine site-specific recombinase 980835 7039390 CFPG_673 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 serine site-specific recombinase YP_002309347.1 980212 D 511995 CDS YP_002309348.1 212551031 7039384 complement(980900..981250) 1 NC_011565.1 hypothetical protein 981250 7039384 CFPG_674 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309348.1 980900 R 511995 CDS YP_002309349.1 212551032 7039353 complement(981597..982115) 1 NC_011565.1 hypothetical protein 982115 7039353 CFPG_675 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309349.1 981597 R 511995 CDS YP_002309350.1 212551033 7039268 complement(984084..984320) 1 NC_011565.1 hypothetical protein 984320 7039268 CFPG_676 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309350.1 984084 R 511995 CDS YP_002309351.1 212551034 7039312 988221..988760 1 NC_011565.1 hypothetical protein 988760 7039312 CFPG_677 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309351.1 988221 D 511995 CDS YP_002309352.1 212551035 7039243 989268..989663 1 NC_011565.1 hypothetical protein 989663 7039243 CFPG_678 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309352.1 989268 D 511995 CDS YP_002309353.1 212551036 7039304 991861..992181 1 NC_011565.1 hypothetical protein 992181 7039304 CFPG_679 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309353.1 991861 D 511995 CDS YP_002309354.1 212551037 7039255 complement(992545..992847) 1 NC_011565.1 hypothetical protein 992847 7039255 CFPG_680 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309354.1 992545 R 511995 CDS YP_002309355.1 212551038 7039230 complement(993563..993883) 1 NC_011565.1 hypothetical protein 993883 7039230 CFPG_681 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309355.1 993563 R 511995 CDS YP_002309356.1 212551039 7039244 998634..998978 1 NC_011565.1 hypothetical protein 998978 7039244 CFPG_682 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309356.1 998634 D 511995 CDS YP_002309357.1 212551040 7039257 complement(999630..999935) 1 NC_011565.1 hypothetical protein 999935 7039257 CFPG_683 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309357.1 999630 R 511995 CDS YP_002309358.1 212551041 7039282 complement(1001591..1001959) 1 NC_011565.1 hypothetical protein 1001959 7039282 CFPG_684 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309358.1 1001591 R 511995 CDS YP_002309359.1 212551042 7039354 1006863..1007486 1 NC_011565.1 serine site-specific recombinase 1007486 7039354 CFPG_685 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 serine site-specific recombinase YP_002309359.1 1006863 D 511995 CDS YP_002309360.1 212551043 7039239 complement(1007596..1007934) 1 NC_011565.1 hypothetical protein 1007934 7039239 CFPG_686 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309360.1 1007596 R 511995 CDS YP_002309361.1 212551044 7039232 complement(1008237..1008689) 1 NC_011565.1 hypothetical protein 1008689 7039232 CFPG_687 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309361.1 1008237 R 511995 CDS YP_002309362.1 212551045 7040007 complement(1008737..1009048) 1 NC_011565.1 hypothetical protein 1009048 7040007 CFPG_688 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309362.1 1008737 R 511995 CDS YP_002309363.1 212551046 7039196 complement(1009368..1009790) 1 NC_011565.1 hypothetical protein 1009790 7039196 CFPG_689 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309363.1 1009368 R 511995 CDS YP_002309364.1 212551047 7039198 complement(1014066..1014602) 1 NC_011565.1 hypothetical protein 1014602 7039198 CFPG_690 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309364.1 1014066 R 511995 CDS YP_002309365.1 212551048 7039186 1014652..1015011 1 NC_011565.1 hypothetical protein 1015011 7039186 CFPG_691 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309365.1 1014652 D 511995 CDS YP_002309366.1 212551049 7039210 complement(1015060..1016088) 1 NC_011565.1 hypothetical protein 1016088 7039210 CFPG_692 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309366.1 1015060 R 511995 CDS YP_002309367.1 212551050 7039175 complement(1017542..1018162) 1 NC_011565.1 N-acetylmuramoyl-L-alanine amidase 1018162 7039175 CFPG_693 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 N-acetylmuramoyl-L-alanine amidase YP_002309367.1 1017542 R 511995 CDS YP_002309368.1 212551051 7039158 1018805..1019149 1 NC_011565.1 hypothetical protein 1019149 7039158 CFPG_694 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309368.1 1018805 D 511995 CDS YP_002309369.1 212551052 7039161 1022699..1023034 1 NC_011565.1 hypothetical protein 1023034 7039161 CFPG_695 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309369.1 1022699 D 511995 CDS YP_002309370.1 212551053 7039185 1023849..1024478 1 NC_011565.1 hypothetical protein 1024478 7039185 CFPG_696 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309370.1 1023849 D 511995 CDS YP_002309371.1 212551054 7039229 1026223..1026777 1 NC_011565.1 hypothetical protein 1026777 7039229 CFPG_697 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309371.1 1026223 D 511995 CDS YP_002309372.1 212551055 7039209 1027372..1027749 1 NC_011565.1 CrcB-like protein 1027749 7039209 CFPG_698 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 CrcB-like protein YP_002309372.1 1027372 D 511995 CDS YP_002309373.1 212551056 7039159 complement(1028096..1030111) 1 NC_011565.1 hypothetical protein 1030111 7039159 CFPG_699 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309373.1 1028096 R 511995 CDS YP_002309374.1 212551057 7039147 1031094..1031402 1 NC_011565.1 hypothetical protein 1031402 7039147 CFPG_700 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309374.1 1031094 D 511995 CDS YP_002309375.1 212551058 7039142 1031567..1031866 1 NC_011565.1 hypothetical protein 1031866 7039142 CFPG_701 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309375.1 1031567 D 511995 CDS YP_002309376.1 212551059 7040024 1031879..1032229 1 NC_011565.1 hypothetical protein 1032229 7040024 CFPG_702 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309376.1 1031879 D 511995 CDS YP_002309377.1 212551060 7039216 complement(1033104..1034276) 1 NC_011565.1 M23 family peptidase 1034276 7039216 CFPG_703 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 M23 family peptidase YP_002309377.1 1033104 R 511995 CDS YP_002309378.1 212551061 7039190 complement(1034500..1035006) 1 NC_011565.1 hypothetical protein 1035006 7039190 CFPG_704 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309378.1 1034500 R 511995 CDS YP_002309379.1 212551062 7039195 complement(1036777..1037220) 1 NC_011565.1 hypothetical protein 1037220 7039195 CFPG_705 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309379.1 1036777 R 511995 CDS YP_002309380.1 212551063 7040020 1040510..1041538 1 NC_011565.1 hypothetical protein 1041538 7040020 CFPG_706 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309380.1 1040510 D 511995 CDS YP_002309381.1 212551064 7039213 complement(1041587..1041946) 1 NC_011565.1 hypothetical protein 1041946 7039213 CFPG_707 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309381.1 1041587 R 511995 CDS YP_002309382.1 212551065 7039181 complement(1042286..1042696) 1 NC_011565.1 hypothetical protein 1042696 7039181 CFPG_708 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309382.1 1042286 R 511995 CDS YP_002309383.1 212551066 7039183 1043032..1045872 1 NC_011565.1 hypothetical protein 1045872 7039183 CFPG_709 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309383.1 1043032 D 511995 CDS YP_002309384.1 212551067 7039177 complement(1045919..1047319) 1 NC_011565.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1047319 murC 7039177 murC Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 UDP-N-acetylmuramate--L-alanine ligase YP_002309384.1 1045919 R 511995 CDS YP_002309385.1 212551068 7039189 complement(1047300..1048394) 1 NC_011565.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1048394 murG 7039189 murG Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_002309385.1 1047300 R 511995 CDS YP_002309386.1 212551069 7040030 1048622..1049398 1 NC_011565.1 thiamine biosynthesis protein ThiG 1049398 7040030 CFPG_712 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thiamine biosynthesis protein ThiG YP_002309386.1 1048622 D 511995 CDS YP_002309387.1 212551070 7039165 1050074..1051183 1 NC_011565.1 thiamine biosynthesis protein ThiH 1051183 7039165 CFPG_713 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thiamine biosynthesis protein ThiH YP_002309387.1 1050074 D 511995 CDS YP_002309388.1 212551071 7039155 1051180..1051812 1 NC_011565.1 thiamine-phosphate pyrophosphorylase 1051812 7039155 CFPG_714 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thiamine-phosphate pyrophosphorylase YP_002309388.1 1051180 D 511995 CDS YP_002309389.1 212551072 7039170 1051799..1052002 1 NC_011565.1 thiamine biosynthesis protein ThiS 1052002 7039170 CFPG_715 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 thiamine biosynthesis protein ThiS YP_002309389.1 1051799 D 511995 CDS YP_002309390.1 212551073 7040019 1052220..1053155 1 NC_011565.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1053155 7040019 CFPG_716 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribosome-associated GTPase YP_002309390.1 1052220 D 511995 CDS YP_002309391.1 212551074 7040012 1053218..1053715 1 NC_011565.1 30S ribosomal protein S16 1053715 7040012 CFPG_717 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 30S ribosomal protein S16 YP_002309391.1 1053218 D 511995 CDS YP_002309392.1 212551075 7040011 1054414..1055484 1 NC_011565.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1055484 7040011 CFPG_718 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 gamma-glutamyl kinase YP_002309392.1 1054414 D 511995 CDS YP_002309393.1 212551076 7039193 1055500..1056759 1 NC_011565.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1056759 proA 7039193 proA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 gamma-glutamyl phosphate reductase YP_002309393.1 1055500 D 511995 CDS YP_002309394.1 212551077 7040025 complement(1057182..1058009) 1 NC_011565.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1058009 dapF 7040025 dapF Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 diaminopimelate epimerase YP_002309394.1 1057182 R 511995 CDS YP_002309395.1 212551078 7039955 complement(1058033..1058905) 1 NC_011565.1 malonyl CoA-acyl carrier protein transacylase 1058905 7039955 CFPG_721 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 malonyl CoA-acyl carrier protein transacylase YP_002309395.1 1058033 R 511995 CDS YP_002309396.1 212551079 7039790 complement(1059391..1060401) 1 NC_011565.1 glycosyltransferase 1060401 7039790 CFPG_722 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glycosyltransferase YP_002309396.1 1059391 R 511995 CDS YP_002309397.1 212551080 7040006 complement(1060448..1061749) 1 NC_011565.1 Fe-S oxidoreductase 1061749 7040006 CFPG_723 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Fe-S oxidoreductase YP_002309397.1 1060448 R 511995 CDS YP_002309398.1 212551081 7040009 1061988..1062440 1 NC_011565.1 D-tyrosyl-tRNA deacylase 1062440 7040009 CFPG_724 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 D-tyrosyl-tRNA deacylase YP_002309398.1 1061988 D 511995 CDS YP_002309399.1 212551082 7040005 complement(1062447..1063379) 1 NC_011565.1 hypothetical protein 1063379 7040005 CFPG_725 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309399.1 1062447 R 511995 CDS YP_002309400.1 212551083 7039966 complement(1063385..1064662) 1 NC_011565.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1064662 7039966 CFPG_726 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phosphoribosylamine--glycine ligase YP_002309400.1 1063385 R 511995 CDS YP_002309401.1 212551084 7039270 complement(1064703..1065479) 1 NC_011565.1 acetylglutamate kinase 1065479 7039270 CFPG_727 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 acetylglutamate kinase YP_002309401.1 1064703 R 511995 CDS YP_002309402.1 212551085 7039272 complement(1065541..1067550) 1 NC_011565.1 dipeptidyl-peptidase III 1067550 7039272 CFPG_728 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 dipeptidyl-peptidase III YP_002309402.1 1065541 R 511995 CDS YP_002309403.1 212551086 7039240 1067807..1069081 1 NC_011565.1 O-acetylhomoserine (thiol)-lyase/cysteine synthase 1069081 7039240 CFPG_729 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 O-acetylhomoserine (thiol)-lyase/cysteine synthase YP_002309403.1 1067807 D 511995 CDS YP_002309404.1 212551087 7039283 complement(1069333..1069542) 1 NC_011565.1 hypothetical protein 1069542 7039283 CFPG_730 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309404.1 1069333 R 511995 CDS YP_002309405.1 212551088 7039969 complement(1069678..1072143) 1 NC_011565.1 DNA gyrase subunit A 1072143 7039969 CFPG_731 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA gyrase subunit A YP_002309405.1 1069678 R 511995 CDS YP_002309406.1 212551089 7039145 1072788..1074164 1 NC_011565.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1074164 hisS 7039145 hisS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 histidyl-tRNA synthetase YP_002309406.1 1072788 D 511995 CDS YP_002309407.1 212551090 7040010 1074451..1076238 1 NC_011565.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1076238 7040010 CFPG_733 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 GTP-binding protein LepA YP_002309407.1 1074451 D 511995 CDS YP_002309408.1 212551091 7039590 1076241..1077269 1 NC_011565.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1077269 7039590 CFPG_734 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 DNA-binding/iron metalloprotein/AP endonuclease YP_002309408.1 1076241 D 511995 CDS YP_002309409.1 212551092 7039256 1077271..1078512 1 NC_011565.1 Ste24-like endopeptidase 1078512 7039256 CFPG_735 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 Ste24-like endopeptidase YP_002309409.1 1077271 D 511995 CDS YP_002309410.1 212551093 7039252 complement(1078551..1079366) 1 NC_011565.1 glycogen synthase-related protein 1079366 7039252 CFPG_736 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 glycogen synthase-related protein YP_002309410.1 1078551 R 511995 CDS YP_002309411.1 212551094 7039808 1079506..1080348 1 NC_011565.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1080348 panC 7039808 panC Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 pantoate--beta-alanine ligase YP_002309411.1 1079506 D 511995 CDS YP_002309412.1 212551095 7039993 complement(1082568..1083824) 1 NC_011565.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1083824 mraY 7039993 mraY Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002309412.1 1082568 R 511995 CDS YP_002309413.1 212551096 7039990 complement(1083835..1085250) 1 NC_011565.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1085250 murE 7039990 murE Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002309413.1 1083835 R 511995 CDS YP_002309414.1 212551097 7039932 complement(1085255..1087402) 1 NC_011565.1 peptidoglycan synthetase FtsI-like protein 1087402 7039932 CFPG_740 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 peptidoglycan synthetase FtsI-like protein YP_002309414.1 1085255 R 511995 CDS YP_002309415.1 212551098 7039902 complement(1087854..1088201) 1 NC_011565.1 hypothetical protein 1088201 7039902 CFPG_741 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309415.1 1087854 R 511995 CDS YP_002309416.1 212551099 7039373 complement(1088198..1089112) 1 NC_011565.1 S-adenosyl-methyltransferase MraW 1089112 mraW 7039373 mraW Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 S-adenosyl-methyltransferase MraW YP_002309416.1 1088198 R 511995 CDS YP_002309417.1 212551100 7039334 1089280..1090197 1 NC_011565.1 D-3-phosphoglycerate dehydrogenase 1090197 7039334 CFPG_743 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 D-3-phosphoglycerate dehydrogenase YP_002309417.1 1089280 D 511995 CDS YP_002309418.1 212551101 7039661 complement(1095135..1096277) 1 NC_011565.1 carboxynorspermidine decarboxylase 1096277 7039661 CFPG_744 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 carboxynorspermidine decarboxylase YP_002309418.1 1095135 R 511995 CDS YP_002309419.1 212551102 7039329 complement(1096284..1097102) 1 NC_011565.1 3-methyl-2-oxobutanoate hydroxymethyltransferase 1097102 7039329 CFPG_745 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002309419.1 1096284 R 511995 CDS YP_002309420.1 212551103 7039366 complement(1097135..1098061) 1 NC_011565.1 protease 1098061 7039366 CFPG_746 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 protease YP_002309420.1 1097135 R 511995 CDS YP_002309421.1 212551104 7039351 complement(1098027..1098731) 1 NC_011565.1 hypothetical protein 1098731 7039351 CFPG_747 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309421.1 1098027 R 511995 CDS YP_002309422.1 212551105 7039356 complement(1098911..1099540) 1 NC_011565.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1099540 engB 7039356 engB Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribosome biogenesis GTP-binding protein YsxC YP_002309422.1 1098911 R 511995 CDS YP_002309423.1 212551106 7039338 1099987..1100184 1 NC_011565.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1100184 rpmF 7039338 rpmF Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 50S ribosomal protein L32 YP_002309423.1 1099987 D 511995 CDS YP_002309424.1 212551107 7039328 1100276..1101277 1 NC_011565.1 3-oxoacyl-ACP synthase 1101277 7039328 CFPG_750 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-oxoacyl-ACP synthase YP_002309424.1 1100276 D 511995 CDS YP_002309425.1 212551108 7039861 complement(1103218..1104498) 1 NC_011565.1 3-phosphoshikimate 1-carboxyvinyltransferase 1104498 7039861 CFPG_751 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 3-phosphoshikimate 1-carboxyvinyltransferase YP_002309425.1 1103218 R 511995 CDS YP_002309426.1 212551109 7039251 1105858..1107138 1 NC_011565.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1107138 glyA 7039251 glyA Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 serine hydroxymethyltransferase YP_002309426.1 1105858 D 511995 CDS YP_002309427.1 212551110 7039378 1107154..1107861 1 NC_011565.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1107861 pyrH 7039378 pyrH Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 uridylate kinase YP_002309427.1 1107154 D 511995 CDS YP_002309428.1 212551111 7039640 1107923..1108477 1 NC_011565.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1108477 frr 7039640 frr Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 ribosome recycling factor YP_002309428.1 1107923 D 511995 CDS YP_002309429.1 212551112 7039337 1109130..1109351 1 NC_011565.1 hypothetical protein 1109351 7039337 CFPG_755 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 hypothetical protein YP_002309429.1 1109130 D 511995 CDS YP_002309430.1 212551113 7039335 complement(1109358..1110833) 1 NC_011565.1 IMP dehydrogenase 1110833 7039335 CFPG_756 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 IMP dehydrogenase YP_002309430.1 1109358 R 511995 CDS YP_002309431.1 212551114 7039316 1111065..1111745 1 NC_011565.1 M22 family peptidase 1111745 7039316 CFPG_757 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 M22 family peptidase YP_002309431.1 1111065 D 511995 CDS YP_002309432.1 212551115 7039309 complement(1111766..1113517) 1 NC_011565.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1113517 aspS 7039309 aspS Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 aspartyl-tRNA synthetase YP_002309432.1 1111766 R 511995 CDS