-- dump date   	20240507_082654
-- class       	Genbank::misc_feature
-- table       	misc_feature_note
-- id	note
573826000001	Similar to C. albicans YRF1, (HPR5); incomplete sequence; apparent frameshift (exact joining regions uncertain); probable pseudogene
573826000005	appears to be a fusion of C. albicans orf19.2552 adn orf19.2553; these genes were originally merged into one gene, prior to the assembly changes in late 2008
573826000006	Similar to S. cerevisiae OPT1; in-frame stop codon; partial sequence
573826000009	Similar to S. cerevisiae RNA12; in-frame stop codon
573826000010	Similar to S. cerevisiae LPF42
573826000011	lacks splice consensus sites
573826000012	lacks splice consensus sites
573826000016	Similar to C. albicans FGR46
573826000017	Similar to C. albicans YRF1, (HPR5; incomplete sequence; stop codons; apparent frameshift; probable pseudogene
573826000018	Similar to C. albicans YRF1, (HPR5); sequence rearrangement
573826000019	sequence rearrangement
573826000020	CGD orthologue described as being similar to retrotransposon GAG protein, but Fasta hits using this sequence do not show this; apparent genomic rearrangement; lacks splice consensus sites; in-frame stop codons
573826000021	Similar to C. albicans LPF31; Similar to Candida dubliniensis IFA8; in-frame stop codons
573826000022	succinate-semialdehyde dehydrogenase [NADP+], point mutated pseudogene, putative; Similar to S. cerevisiae UGA2; in-frame stop codon
573826000023	Similar to C. albicans HNM4; rearranged pseudogene; possibly fungal-specific
573826000024	frameshift; stop codons
573826000025	rearranged pseudogene
573826000026	transposable element; Similar to C. albicans Tca2 retrotransposon polyprotein POL98
573826000027	rearranged pseudogene
573826000028	stop codon
573826000029	fragment pseudogene
573826000031	rearranged pseudogene
573826000033	isocitrate dehydrogenase, frameshifted fragment, pseudogene; frameshift; stop codons
573826000034	possibly Candida-conserved; frameshift
573826000035	(multidrug resistance) CDR-family ABC transporter, point mutated pseudogene, putative; Similar to C. albicans CDR4; frameshift
573826000036	apparent fragment pseudogene; frameshift; stop codons
573826000037	C. albicans orthologue is not a pseudogene, and is implicated in regulation of filamentous growth; apparent genomic rearrangement; appears to have lost the middle section of the corresponding C. albicans orthologue
573826000038	rearranged pseudogene
573826000040	S-adenosylmethionine synthetase, fragment pseudogene, putative; Similar to S. pombe SAM1; Similar to C. albicans SAM2; Similar to S. cerevisiae SAM2
573826000043	gi|223641136; Similar to S. cerevisiae RIB3; Similar to C. albicans RIB3
573826000045	rearranged pseudogene
573826000047	in-frame stop codons; partial sequence; probably pseudogene; Similar to C. albicans YRF1, (HPR5)
573826000048	in-frame stop codons, partial sequence, appears to be degenerate pseudogene; Similar to C. albicans YRF1, (HPR5)
573826000050	in-frame stop codons; Similar to C. albicans LPF29; Similar to C. albicans FGR51; possibly Candida-specific; Similar to a C.albicans gene family identified as FGR (filamentous growth regulator) genes; designated FGR1, FGR2, etc.
573826000052	oxidoreductase, degenerate fragmented pseudogene, putative; Similar to S. cerevisiae GRE2; In S. cerevisiae, NADPH-dependent methylglyoxal reductase (D-lactaldehyde dehydrogenase); stress induced (osmotic, ionic, oxidative, heat shock and heavy metals); regulated by the HOG pathway
573826000053	frameshifted
573826000054	Similar to S. cerevisiae NST1; apparent -1 frameshift
573826000056	Similar to Pichia stipitis IDH1; degraded pseudogene in HOK region of MRS_1
573826000057	similar to Pichia stipitis IDH1; degraded pseudogene in HOK region of MRS_2
573826000058	Similar to C. albicans YRF1, (HPR5); stop codons, partial sequence; appears to be degenerate pseudogene
573826000059	Similar to S. cerevisiae YRF1, (HPR5)
573826000060	tranposable element; incomplete sequence; in-frame stop codon
573826000061	apparent pseudogene; missing translational start codon and upstream sequences; Similar to S. cerevisiae LPF37; No apparent C. albicans orthologue at this locus; only putative gene relic
573826000062	transposable element; apparent genomic rearrangement
573826000064	pseudogene orthologue of orf19.1664; in-frame stop codons; no splice consensus sequences
573826000065	apparent pseudogene; in-frame stop codon and no splice consensii; appears to be (imperfectly) repeated on other side of MRS - see Cd36_81940
573826000066	appears to be a rearranged, partial and inactivated isocitrate dehydrogenase pseudogene; Similar to S. pombe IDH1
573826000067	appears to be (imperfectly) repeated on other side of the MRS - Cd36_81870; truncated pseudogene: consists of only C-terminal third of CDS (aa336-516)
573826000069	Similar to S. cerevisiae ECM18; in-frame stop codon; apparent frameshift - no splice consensus sequences
573826000071	transposable element
573826000076	incomplete, apparent frameshifts, no splice consensus sequences; Similar to C. albicans YRF1, (HPR5)
573826000077	Similar to C. albicans YRF1, (HPR5); partial sequence, appears to be a pseudogene
573826000078	in-frame stop codon; apparent functional, but hypothetical gene in C. albicans
573826000079	in-frame stop codon
573826000080	Similar to Pichia stipitis IDH1; degraded pseudogene in HOK region of MRS_1
573826000081	Similar to S. cerevisiae POL92; in-frame stop codons; lacks splice consensus sites; transposon pseudogene; transposable element
573826000083	degraded pseudogene in HOK region of MRS_2
573826000084	similar to Candida dubliniensis, Q8TGW0; apparently rearranged pseudogene
573826000085	in-frame stop codons; frame-shift
573826000086	possible rearranged pseudogene; MmTsnax
573826000087	Similar to C. albicans YRF1, (HPR5); incomplete sequence, no splice junction consensus, apparent pseudogene
573826000088	appears to be incomplete ORF; apparent frameshift; probable pseudogene; Similar to C. albicans YRF1 (HPR5)
573826000089	appears to be incomplete ORF; apparent frameshift; probable pseudogene; Similar to C. albicans YRF1 (HPR5)
573826000091	Similar to S. cerevisiae LPF6; not a pseudogene in C. albicans
573826000092	not a pseudogene in C. albicans
573826000094	fragment pseudogene; incomplete ORF
573826000095	incomplete ORF
573826000096	in-frame stop codons; frameshift; Similar to C. albicans LPF34
573826000097	Similar to C. albicans FGR42
573826000098	apparent genome rearrangement; in-frame stop codons; not a pseudogene in C. albicans
573826000100	Similar to C. albicans YRF1, (HPR5); incomplete sequence; apparent frameshifts; probably pseudogene
573826000102	Similar to C. albicans FRP5 (FUN34); Similar to S. cerevisiae ATO2 (FUN34); In S. cerevisiae: ATO2 is a putative transmembrane protein involved in export of ammonia, a starvation signal that promotes cell death in aging colonies
573826000104	in-frame stop codons; apparent genomic rearrangement; Similar to C. albicans FGR37; C. albicans orthologue described as filamentous growth regulator (FGR) protein
573826000105	in-frame stop codons; Similar to S. cerevisiae RNH1
573826000106	Similar to S. cerevisiae LPF39; rearranged/degenerate pseudogene; in-frame stop codons
573826000108	Similar to Pichia stipitis IDH1; degraded pseudogene in HOK region of MRS
573826000109	Similar to S. cerevisiae POL90; transposable element
573826000110	incomplete sequence, apparent frameshift, probable pseudogene; Similar to C. albicans YRF1, (HPR5)
573826000111	Similar to C. dubliniensis UniProt:Q8TGW0; located in MRS RB2 region; very similar to Q8TGW0 in C. dubliniensis, but lacks middle third of the sequence; fragmented, but with no splice consensus sequences; in-frame stop codon in N-terminus
573826000112	Similar to Pichia stipitis IDH1; degraded pseudogene in HOK region of MRS_1
573826000114	Similar to Pichia stipitis IDH1; degraded pseudogene in HOK region of MRS_2
573826000115	transposable element
573826000116	putative LPF gene family member; frameshifted, degenerate and fragmented pseudogene
573826000117	putative LPF gene family member; frameshifted and degenerate pseudogene; possibly Candida-specific
573826000118	hypothetical protein, Candida conserved, degenerate frameshifted pseudogene, putative; putative LPF gene family member; frameshifted and degenerate pseudogene, putative
573826000119	putative LPF gene family member; fragmented pseudogene
573826000120	in-frame stop codons; truncated
573826000123	Similar to C. albicans YRF1, (HPR5); incomplete sequence, apparent frame-shifts; probable pseudogene