-- dump date 20140619_021702 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 354242000001 SEQ_END SEQ_END NC_008770.1 37473 37473 DR NC_008770.1; contig end 37473..37473 Campylobacter jejuni subsp. jejuni 81-176 354242000002 SEQ_END SEQ_END NC_008787.1 1616554 1616554 DR NC_008787.1; contig end 1616554..1616554 Campylobacter jejuni subsp. jejuni 81-176 354242000003 SEQ_END SEQ_END NC_008790.1 45025 45025 DR NC_008790.1; contig end 45025..45025 Campylobacter jejuni subsp. jejuni 81-176 YP_980060.1 CDS CJJ81176_pVir0001 NC_008770.1 1 678 D identified by match to protein family HMM PF04335; VirB8 1..678 Campylobacter jejuni subsp. jejuni 81-176 4682029 YP_980061.1 CDS CJJ81176_pVir0002 NC_008770.1 678 1748 D identified by match to protein family HMM PF03524; VirB9 678..1748 Campylobacter jejuni subsp. jejuni 81-176 4682030 YP_980062.1 CDS CJJ81176_pVir0003 NC_008770.1 1745 2881 D identified by match to protein family HMM PF03743; VirB10 1745..2881 Campylobacter jejuni subsp. jejuni 81-176 4682041 YP_980063.1 CDS CJJ81176_pVir0004 NC_008770.1 2892 3092 D hypothetical protein 2892..3092 Campylobacter jejuni subsp. jejuni 81-176 4682037 YP_980064.1 CDS trbB NC_008770.1 3085 4038 D identified by match to protein family HMM PF00437; conjugative transfer regulon protein 3085..4038 Campylobacter jejuni subsp. jejuni 81-176 4682040 YP_980065.1 CDS CJJ81176_pVir0006 NC_008770.1 4048 4455 D hypothetical protein 4048..4455 Campylobacter jejuni subsp. jejuni 81-176 4682045 YP_980066.1 CDS CJJ81176_pVir0007 NC_008770.1 4452 6338 D identified by match to protein family HMM PF02534; hypothetical protein 4452..6338 Campylobacter jejuni subsp. jejuni 81-176 4682063 YP_980067.1 CDS CJJ81176_pVir0008 NC_008770.1 6457 6627 D hypothetical protein 6457..6627 Campylobacter jejuni subsp. jejuni 81-176 4682055 YP_980068.1 CDS CJJ81176_pVir0009 NC_008770.1 6702 7583 D hypothetical protein 6702..7583 Campylobacter jejuni subsp. jejuni 81-176 4682071 YP_980069.1 CDS CJJ81176_pVir0010 NC_008770.1 7728 7997 D hypothetical protein 7728..7997 Campylobacter jejuni subsp. jejuni 81-176 4682035 YP_980070.1 CDS CJJ81176_pVir0011 NC_008770.1 8007 9155 D hypothetical protein 8007..9155 Campylobacter jejuni subsp. jejuni 81-176 4682031 YP_980071.1 CDS CJJ81176_pVir0012 NC_008770.1 9177 11144 D identified by match to protein family HMM PF01131; match to protein family HMM PF01751; DNA topoisomerase I 9177..11144 Campylobacter jejuni subsp. jejuni 81-176 4682044 YP_980072.1 CDS CJJ81176_pVir0013 NC_008770.1 11351 11716 D hypothetical protein 11351..11716 Campylobacter jejuni subsp. jejuni 81-176 4682038 YP_980073.1 CDS CJJ81176_pVir0014 NC_008770.1 11732 12190 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; hypothetical protein 11732..12190 Campylobacter jejuni subsp. jejuni 81-176 4682061 YP_980074.1 CDS CJJ81176_pVir0015 NC_008770.1 12326 12499 D hypothetical protein 12326..12499 Campylobacter jejuni subsp. jejuni 81-176 4682039 YP_980075.1 CDS CJJ81176_pVir0016 NC_008770.1 12550 13122 D hypothetical protein 12550..13122 Campylobacter jejuni subsp. jejuni 81-176 4682054 YP_980076.1 CDS CJJ81176_pVir0017 NC_008770.1 13085 13564 D hypothetical protein 13085..13564 Campylobacter jejuni subsp. jejuni 81-176 4682062 YP_980077.1 CDS CJJ81176_pVir0018 NC_008770.1 13589 13942 D hypothetical protein 13589..13942 Campylobacter jejuni subsp. jejuni 81-176 4682078 YP_980078.1 CDS CJJ81176_pVir0019 NC_008770.1 13932 14057 D hypothetical protein 13932..14057 Campylobacter jejuni subsp. jejuni 81-176 4682050 YP_980079.1 CDS CJJ81176_pVir0020 NC_008770.1 14157 14702 D hypothetical protein 14157..14702 Campylobacter jejuni subsp. jejuni 81-176 4682070 YP_980080.1 CDS CJJ81176_pVir0021 NC_008770.1 14699 15112 D hypothetical protein 14699..15112 Campylobacter jejuni subsp. jejuni 81-176 4682058 YP_980081.1 CDS CJJ81176_pVir0022 NC_008770.1 15109 15516 D hypothetical protein 15109..15516 Campylobacter jejuni subsp. jejuni 81-176 4682043 YP_980082.1 CDS CJJ81176_pVir0023 NC_008770.1 15527 15850 D hypothetical protein 15527..15850 Campylobacter jejuni subsp. jejuni 81-176 4682034 YP_980083.1 CDS CJJ81176_pVir0024 NC_008770.1 15919 16152 D hypothetical protein 15919..16152 Campylobacter jejuni subsp. jejuni 81-176 4682052 YP_980084.1 CDS CJJ81176_pVir0025 NC_008770.1 16642 17310 D identified by match to protein family HMM PF01656; para protein 16642..17310 Campylobacter jejuni subsp. jejuni 81-176 4682036 YP_980085.1 CDS CJJ81176_pVir0026 NC_008770.1 17320 17949 D hypothetical protein 17320..17949 Campylobacter jejuni subsp. jejuni 81-176 4682069 YP_980086.1 CDS CJJ81176_pVir0027 NC_008770.1 17973 18809 R identified by match to protein family HMM PF01051; RepE replication protein, putative complement(17973..18809) Campylobacter jejuni subsp. jejuni 81-176 4682076 YP_980087.1 CDS CJJ81176_pVir0028 NC_008770.1 19930 21051 D hypothetical protein 19930..21051 Campylobacter jejuni subsp. jejuni 81-176 4682072 YP_980088.1 CDS CJJ81176_pVir0029 NC_008770.1 21048 21926 D hypothetical protein 21048..21926 Campylobacter jejuni subsp. jejuni 81-176 4682047 YP_980089.1 CDS CJJ81176_pVir0030 NC_008770.1 22030 22812 D identified by match to protein family HMM PF07424; cpp45 22030..22812 Campylobacter jejuni subsp. jejuni 81-176 4682057 YP_980090.1 CDS CJJ81176_pVir0031 NC_008770.1 22843 23562 D hypothetical protein 22843..23562 Campylobacter jejuni subsp. jejuni 81-176 4682042 YP_980091.1 CDS CJJ81176_pVir0032 NC_008770.1 23562 24815 D hypothetical protein 23562..24815 Campylobacter jejuni subsp. jejuni 81-176 4682028 YP_980092.1 CDS CJJ81176_pVir0033 NC_008770.1 24799 25227 D hypothetical protein 24799..25227 Campylobacter jejuni subsp. jejuni 81-176 4682051 YP_980093.1 CDS CJJ81176_pVir0034 NC_008770.1 25484 25609 R hypothetical protein complement(25484..25609) Campylobacter jejuni subsp. jejuni 81-176 4682032 YP_980094.1 CDS CJJ81176_pVir0035 NC_008770.1 25704 26048 D hypothetical protein 25704..26048 Campylobacter jejuni subsp. jejuni 81-176 4682027 YP_980095.1 CDS CJJ81176_pVir0036 NC_008770.1 26062 26370 D hypothetical protein 26062..26370 Campylobacter jejuni subsp. jejuni 81-176 4682048 YP_980096.1 CDS CJJ81176_pVir0037 NC_008770.1 26380 26601 D hypothetical protein 26380..26601 Campylobacter jejuni subsp. jejuni 81-176 4682056 YP_980097.1 CDS CJJ81176_pVir0038 NC_008770.1 26614 27009 D pTet39 26614..27009 Campylobacter jejuni subsp. jejuni 81-176 4682066 YP_980098.1 CDS CJJ81176_pVir0039 NC_008770.1 27082 27492 D hypothetical protein 27082..27492 Campylobacter jejuni subsp. jejuni 81-176 4682059 YP_980099.1 CDS CJJ81176_pVir0040 NC_008770.1 27489 27920 D hypothetical protein 27489..27920 Campylobacter jejuni subsp. jejuni 81-176 4682079 YP_980100.1 CDS CJJ81176_pVir0041 NC_008770.1 28128 28313 D hypothetical protein 28128..28313 Campylobacter jejuni subsp. jejuni 81-176 4682060 YP_980101.1 CDS CJJ81176_pVir0042 NC_008770.1 28325 28495 D hypothetical protein 28325..28495 Campylobacter jejuni subsp. jejuni 81-176 4682075 YP_980102.1 CDS CJJ81176_pVir0043 NC_008770.1 28575 28703 D hypothetical protein 28575..28703 Campylobacter jejuni subsp. jejuni 81-176 4682065 YP_980103.1 CDS CJJ81176_pVir0044 NC_008770.1 29105 29470 D hypothetical protein 29105..29470 Campylobacter jejuni subsp. jejuni 81-176 4682049 YP_980104.1 CDS CJJ81176_pVir0045 NC_008770.1 29507 29842 D hypothetical protein 29507..29842 Campylobacter jejuni subsp. jejuni 81-176 4682053 YP_980105.1 CDS CJJ81176_pVir0046 NC_008770.1 30039 30401 D hypothetical protein 30039..30401 Campylobacter jejuni subsp. jejuni 81-176 4682046 YP_980106.1 CDS CJJ81176_pVir0047 NC_008770.1 30634 31038 D hypothetical protein 30634..31038 Campylobacter jejuni subsp. jejuni 81-176 4682073 YP_980107.1 CDS CJJ81176_pVir0048 NC_008770.1 31284 31676 D hypothetical protein 31284..31676 Campylobacter jejuni subsp. jejuni 81-176 4682067 YP_980108.1 CDS CJJ81176_pVir0049 NC_008770.1 31903 33474 R hypothetical protein complement(31903..33474) Campylobacter jejuni subsp. jejuni 81-176 4682064 YP_980109.1 CDS CJJ81176_pVir0050 NC_008770.1 33855 34103 R hypothetical protein complement(33855..34103) Campylobacter jejuni subsp. jejuni 81-176 4682033 YP_980110.1 CDS CJJ81176_pVir0051 NC_008770.1 34305 34610 D hypothetical protein 34305..34610 Campylobacter jejuni subsp. jejuni 81-176 4682074 YP_980111.1 CDS CJJ81176_pVir0052 NC_008770.1 34610 34852 D hypothetical protein 34610..34852 Campylobacter jejuni subsp. jejuni 81-176 4682077 YP_980112.1 CDS CJJ81176_pVir0053 NC_008770.1 34862 37330 D identified by match to protein family HMM PF03135; VirB4 34862..37330 Campylobacter jejuni subsp. jejuni 81-176 4682068 YP_999720.1 CDS dnaA NC_008787.1 1 1323 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1..1323 Campylobacter jejuni subsp. jejuni 81-176 4682521 YP_999721.1 CDS dnaN NC_008787.1 1483 2550 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1483..2550 Campylobacter jejuni subsp. jejuni 81-176 4683605 YP_999722.1 CDS gyrB NC_008787.1 2579 4888 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 2579..4888 Campylobacter jejuni subsp. jejuni 81-176 4683674 YP_999723.1 CDS CJJ81176_0030 NC_008787.1 4914 5255 R hypothetical protein complement(4914..5255) Campylobacter jejuni subsp. jejuni 81-176 4682941 YP_999724.1 CDS CJJ81176_0031 NC_008787.1 5258 6496 R identified by match to protein family HMM PF00174; match to protein family HMM PF03404; molybdopterin oxidoreductase family protein complement(5258..6496) Campylobacter jejuni subsp. jejuni 81-176 4682486 YP_999725.1 CDS CJJ81176_0032 NC_008787.1 6707 8008 D identified by match to protein family HMM PF03553; match to protein family HMM PF03600; match to protein family HMM PF06808; Na+/H+ antiporter family protein 6707..8008 Campylobacter jejuni subsp. jejuni 81-176 4683052 YP_999726.1 CDS gltB NC_008787.1 8142 12629 D identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; glutamate synthase, large subunit 8142..12629 Campylobacter jejuni subsp. jejuni 81-176 4683618 YP_999727.1 CDS CJJ81176_0034 NC_008787.1 12649 14370 D identified by match to protein family HMM PF03235; match to protein family HMM PF07510; hypothetical protein 12649..14370 Campylobacter jejuni subsp. jejuni 81-176 4682218 YP_999728.1 CDS gltD NC_008787.1 14381 15826 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 14381..15826 Campylobacter jejuni subsp. jejuni 81-176 4683174 YP_999729.1 CDS rnhB NC_008787.1 15827 16402 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(15827..16402) Campylobacter jejuni subsp. jejuni 81-176 4682106 YP_999730.1 CDS comEA NC_008787.1 16435 16674 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; competence protein ComEA complement(16435..16674) Campylobacter jejuni subsp. jejuni 81-176 4682587 YP_999731.1 CDS rbr NC_008787.1 16739 17290 R identified by match to protein family HMM PF00301; match to protein family HMM PF02915; rubrerythrin complement(16739..17290) Campylobacter jejuni subsp. jejuni 81-176 4683039 YP_999732.1 CDS ilvD NC_008787.1 17546 19222 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 17546..19222 Campylobacter jejuni subsp. jejuni 81-176 4683668 YP_999733.1 CDS CJJ81176_0040 NC_008787.1 19234 19383 R inner membrane protein YagU complement(19234..19383) Campylobacter jejuni subsp. jejuni 81-176 4682377 YP_999734.1 CDS CJJ81176_0041 NC_008787.1 19349 19630 R membrane protein, putative, degenerate complement(19349..19630) Campylobacter jejuni subsp. jejuni 81-176 4683523 YP_999735.1 CDS CJJ81176_0042 NC_008787.1 19722 20948 R hypothetical protein complement(19722..20948) Campylobacter jejuni subsp. jejuni 81-176 4682389 YP_999736.1 CDS CJJ81176_0043 NC_008787.1 21025 21699 D identified by match to protein family HMM PF02568; match to protein family HMM PF06508; match to protein family HMM TIGR00364; exsB protein 21025..21699 Campylobacter jejuni subsp. jejuni 81-176 4683326 YP_999737.1 CDS CJJ81176_0044 NC_008787.1 21720 23246 R identified by match to protein family HMM PF02600; DsbB family disulfide bond formation protein complement(21720..23246) Campylobacter jejuni subsp. jejuni 81-176 4682788 YP_999738.1 CDS CJJ81176_0045 NC_008787.1 23258 23425 R hypothetical protein complement(23258..23425) Campylobacter jejuni subsp. jejuni 81-176 4682091 YP_999739.1 CDS CJJ81176_0046 NC_008787.1 23531 25285 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(23531..25285) Campylobacter jejuni subsp. jejuni 81-176 4682958 YP_999740.1 CDS ccpA-1 NC_008787.1 25299 26213 R identified by match to protein family HMM PF03150; cytochrome c551 peroxidase complement(25299..26213) Campylobacter jejuni subsp. jejuni 81-176 4682359 YP_999741.1 CDS CJJ81176_0048 NC_008787.1 26277 27155 R identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase family protein complement(26277..27155) Campylobacter jejuni subsp. jejuni 81-176 4682940 YP_999742.1 CDS CJJ81176_0049 NC_008787.1 27267 28169 R identified by match to protein family HMM PF00849; RNA pseudouridine synthase family protein complement(27267..28169) Campylobacter jejuni subsp. jejuni 81-176 4682257 YP_999743.1 CDS purB-1 NC_008787.1 28247 29575 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 28247..29575 Campylobacter jejuni subsp. jejuni 81-176 4682961 YP_999744.1 CDS nrdA NC_008787.1 29591 31960 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 29591..31960 Campylobacter jejuni subsp. jejuni 81-176 4682595 YP_999745.1 CDS CJJ81176_0052 NC_008787.1 31999 33384 R identified by match to protein family HMM PF00375; sodium/dicarboxylate symporter complement(31999..33384) Campylobacter jejuni subsp. jejuni 81-176 4683224 YP_999746.1 CDS thyX NC_008787.1 33504 34127 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(33504..34127) Campylobacter jejuni subsp. jejuni 81-176 4683598 YP_999747.1 CDS pyrG NC_008787.1 34247 35878 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 34247..35878 Campylobacter jejuni subsp. jejuni 81-176 4682821 YP_999748.1 CDS recJ NC_008787.1 35865 37436 D identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 35865..37436 Campylobacter jejuni subsp. jejuni 81-176 4683476 YP_999749.1 CDS ansA NC_008787.1 37522 38568 D identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; L-asparaginase 37522..38568 Campylobacter jejuni subsp. jejuni 81-176 4682336 YP_999750.1 CDS CJJ81176_0061 NC_008787.1 44542 44694 R hypothetical protein complement(44542..44694) Campylobacter jejuni subsp. jejuni 81-176 4682570 YP_999751.1 CDS CJJ81176_0063 NC_008787.1 45264 47234 D hypothetical protein 45264..47234 Campylobacter jejuni subsp. jejuni 81-176 4682187 YP_999752.1 CDS CJJ81176_0064 NC_008787.1 47275 49344 D cytochrome c family protein 47275..49344 Campylobacter jejuni subsp. jejuni 81-176 4683716 YP_999753.1 CDS CJJ81176_0065 NC_008787.1 49388 49972 D hypothetical protein 49388..49972 Campylobacter jejuni subsp. jejuni 81-176 4682575 YP_999754.1 CDS CJJ81176_0066 NC_008787.1 49965 52670 D identified by match to protein family HMM PF01578; cytochrome c biogenesis protein 49965..52670 Campylobacter jejuni subsp. jejuni 81-176 4683482 YP_999755.1 CDS ggt NC_008787.1 52705 54375 R identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase complement(52705..54375) Campylobacter jejuni subsp. jejuni 81-176 4683465 YP_999756.1 CDS CJJ81176_0068 NC_008787.1 54605 58339 D type II restriction-modification enzyme 54605..58339 Campylobacter jejuni subsp. jejuni 81-176 4682987 YP_999757.1 CDS CJJ81176_0069 NC_008787.1 58339 59223 D hypothetical protein 58339..59223 Campylobacter jejuni subsp. jejuni 81-176 4683669 YP_999758.1 CDS CJJ81176_0070 NC_008787.1 59461 60903 D identified by match to protein family HMM PF00912; transglycosylase domain-containing protein 59461..60903 Campylobacter jejuni subsp. jejuni 81-176 4683784 YP_999759.1 CDS CJJ81176_0071 NC_008787.1 61018 62559 D putative integral membrane protein 61018..62559 Campylobacter jejuni subsp. jejuni 81-176 4682188 YP_999760.1 CDS CJJ81176_0072 NC_008787.1 62588 63289 R identified by match to protein family HMM PF04402; hypothetical protein complement(62588..63289) Campylobacter jejuni subsp. jejuni 81-176 4682835 YP_999761.1 CDS CJJ81176_0073 NC_008787.1 63276 64487 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710; Bcr/CflA subfamily drug resistance transporter complement(63276..64487) Campylobacter jejuni subsp. jejuni 81-176 4682476 YP_999762.1 CDS CJJ81176_0074 NC_008787.1 64590 65939 D hypothetical protein 64590..65939 Campylobacter jejuni subsp. jejuni 81-176 4683017 YP_999763.1 CDS CJJ81176_0075 NC_008787.1 65963 67006 R identified by match to protein family HMM PF00034; cytochrome c family protein complement(65963..67006) Campylobacter jejuni subsp. jejuni 81-176 4683293 YP_999764.1 CDS CJJ81176_0076 NC_008787.1 67184 67831 R hypothetical protein complement(67184..67831) Campylobacter jejuni subsp. jejuni 81-176 4682436 YP_999765.1 CDS typA NC_008787.1 67831 69639 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA complement(67831..69639) Campylobacter jejuni subsp. jejuni 81-176 4682678 YP_999766.1 CDS CJJ81176_0078 NC_008787.1 69774 70097 D hypothetical protein 69774..70097 Campylobacter jejuni subsp. jejuni 81-176 4683678 YP_999767.1 CDS CJJ81176_0079 NC_008787.1 70117 71946 D hypothetical protein 70117..71946 Campylobacter jejuni subsp. jejuni 81-176 4682689 YP_999768.1 CDS flgD NC_008787.1 72000 72884 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 72000..72884 Campylobacter jejuni subsp. jejuni 81-176 4683683 YP_999769.1 CDS flgE-1 NC_008787.1 72888 74525 D identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559; flagellar hook protein 72888..74525 Campylobacter jejuni subsp. jejuni 81-176 4683095 YP_999770.1 CDS CJJ81176_0082 NC_008787.1 74529 76397 R hypothetical protein complement(74529..76397) Campylobacter jejuni subsp. jejuni 81-176 4682778 YP_999771.1 CDS CJJ81176_0083 NC_008787.1 76682 77116 R identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hypothetical protein complement(76682..77116) Campylobacter jejuni subsp. jejuni 81-176 4683756 YP_999772.1 CDS CJJ81176_0084 NC_008787.1 77645 77764 D hypothetical protein 77645..77764 Campylobacter jejuni subsp. jejuni 81-176 4682338 YP_999773.1 CDS CJJ81176_0085 NC_008787.1 77987 78322 D anion transporter 77987..78322 Campylobacter jejuni subsp. jejuni 81-176 4682617 YP_999774.1 CDS CJJ81176_0086 NC_008787.1 78274 78453 D anion transporter 78274..78453 Campylobacter jejuni subsp. jejuni 81-176 4682901 YP_999775.1 CDS CJJ81176_0087 NC_008787.1 78413 78604 D 2-oxoglutarate/malate translocator 78413..78604 Campylobacter jejuni subsp. jejuni 81-176 4682224 YP_999776.1 CDS CJJ81176_0088 NC_008787.1 78615 78782 D anion transporter 78615..78782 Campylobacter jejuni subsp. jejuni 81-176 4682706 YP_999777.1 CDS CJJ81176_0089 NC_008787.1 78801 79151 D 2-oxoglutarate/malate translocator 78801..79151 Campylobacter jejuni subsp. jejuni 81-176 4683441 YP_999778.1 CDS mnmA NC_008787.1 79179 80195 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(79179..80195) Campylobacter jejuni subsp. jejuni 81-176 4682268 YP_999779.1 CDS CJJ81176_0091 NC_008787.1 80195 80800 R identified by match to protein family HMM PF03641; lysine decarboxylase family protein complement(80195..80800) Campylobacter jejuni subsp. jejuni 81-176 4683236 YP_999780.1 CDS CJJ81176_0092 NC_008787.1 80921 81709 R hypothetical protein complement(80921..81709) Campylobacter jejuni subsp. jejuni 81-176 4682642 YP_999781.1 CDS CJJ81176_0093 NC_008787.1 81723 82316 R hypothetical protein complement(81723..82316) Campylobacter jejuni subsp. jejuni 81-176 4683136 YP_999782.1 CDS CJJ81176_0094 NC_008787.1 82860 83504 D HmcD domain-containing protein 82860..83504 Campylobacter jejuni subsp. jejuni 81-176 4682151 YP_999783.1 CDS CJJ81176_0095 NC_008787.1 83489 83692 D peptidase family protein 83489..83692 Campylobacter jejuni subsp. jejuni 81-176 4683085 YP_999784.1 CDS CJJ81176_0096 NC_008787.1 83698 84087 D identified by match to protein family HMM PF03412; peptidase family protein 83698..84087 Campylobacter jejuni subsp. jejuni 81-176 4682345 YP_999785.1 CDS fliY NC_008787.1 84136 84957 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliY complement(84136..84957) Campylobacter jejuni subsp. jejuni 81-176 4683223 YP_999786.1 CDS fliM NC_008787.1 84975 86054 R with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM complement(84975..86054) Campylobacter jejuni subsp. jejuni 81-176 4683402 YP_999787.1 CDS fliA NC_008787.1 86054 86746 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(86054..86746) Campylobacter jejuni subsp. jejuni 81-176 4683208 YP_999788.1 CDS CJJ81176_0100 NC_008787.1 86727 87083 R hypothetical protein complement(86727..87083) Campylobacter jejuni subsp. jejuni 81-176 4683718 YP_999789.1 CDS CJJ81176_0101 NC_008787.1 87102 87968 R identified by match to protein family HMM PF01656; ParaA family ATPase complement(87102..87968) Campylobacter jejuni subsp. jejuni 81-176 4682831 YP_999790.1 CDS flhF NC_008787.1 87961 89415 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(87961..89415) Campylobacter jejuni subsp. jejuni 81-176 4682976 YP_999791.1 CDS folK NC_008787.1 89425 89898 R identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(89425..89898) Campylobacter jejuni subsp. jejuni 81-176 4682710 YP_999792.1 CDS aroQ NC_008787.1 89901 90380 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(89901..90380) Campylobacter jejuni subsp. jejuni 81-176 4683193 YP_999793.1 CDS CJJ81176_0105 NC_008787.1 90471 91700 D Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase 90471..91700 Campylobacter jejuni subsp. jejuni 81-176 4683298 YP_999794.1 CDS sppA NC_008787.1 91688 92584 D identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 36K type 91688..92584 Campylobacter jejuni subsp. jejuni 81-176 4682283 YP_999795.1 CDS CJJ81176_0107 NC_008787.1 92663 93694 D hypothetical protein 92663..93694 Campylobacter jejuni subsp. jejuni 81-176 4682124 YP_999796.1 CDS CJJ81176_1709 NC_008787.1 93707 93829 D hypothetical protein 93707..93829 Campylobacter jejuni subsp. jejuni 81-176 4683424 YP_999797.1 CDS CJJ81176_0108 NC_008787.1 93936 94052 R hemerythrin family non-heme iron protein complement(93936..94052) Campylobacter jejuni subsp. jejuni 81-176 4682234 YP_999798.1 CDS CJJ81176_0109 NC_008787.1 94262 94558 R hypothetical protein complement(94262..94558) Campylobacter jejuni subsp. jejuni 81-176 4683138 YP_999799.1 CDS CJJ81176_0110 NC_008787.1 94731 95387 R identified by match to protein family HMM PF02589; hypothetical protein complement(94731..95387) Campylobacter jejuni subsp. jejuni 81-176 4683689 YP_999800.1 CDS CJJ81176_0111 NC_008787.1 95380 96819 R identified by match to protein family HMM PF00037; match to protein family HMM TIGR00273; iron-sulfur cluster binding protein complement(95380..96819) Campylobacter jejuni subsp. jejuni 81-176 4683077 YP_999801.1 CDS CJJ81176_0112 NC_008787.1 96816 97556 R identified by match to protein family HMM PF02754; hypothetical protein complement(96816..97556) Campylobacter jejuni subsp. jejuni 81-176 4682229 YP_999802.1 CDS lctP NC_008787.1 97679 99361 R identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795; L-lactate permease complement(97679..99361) Campylobacter jejuni subsp. jejuni 81-176 4683663 YP_999803.1 CDS cdtC NC_008787.1 99533 100102 R identified by match to protein family HMM PF03498; cytolethal distending toxin, subunit C complement(99533..100102) Campylobacter jejuni subsp. jejuni 81-176 4683067 YP_999804.1 CDS cdtB NC_008787.1 100113 100910 R identified by match to protein family HMM PF03372; cytolethal distending toxin, subunit B complement(100113..100910) Campylobacter jejuni subsp. jejuni 81-176 4682711 YP_999805.1 CDS cdtA NC_008787.1 100907 101713 R identified by match to protein family HMM PF03498; cytolethal distending toxin, subunit A complement(100907..101713) Campylobacter jejuni subsp. jejuni 81-176 4683576 YP_999806.1 CDS CJJ81176_0117 NC_008787.1 101790 102059 D hypothetical protein 101790..102059 Campylobacter jejuni subsp. jejuni 81-176 4682145 YP_999807.1 CDS cydA NC_008787.1 102060 103622 D identified by match to protein family HMM PF01654; cytochrome d ubiquinol oxidase, subunit I 102060..103622 Campylobacter jejuni subsp. jejuni 81-176 4682308 YP_999808.1 CDS cydB NC_008787.1 103622 104746 D identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome d ubiquinol oxidase, subunit II 103622..104746 Campylobacter jejuni subsp. jejuni 81-176 4682670 YP_999809.1 CDS CJJ81176_0120 NC_008787.1 104940 105635 R identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035; aspartate racemase, putative complement(104940..105635) Campylobacter jejuni subsp. jejuni 81-176 4683027 YP_999810.1 CDS ung NC_008787.1 105755 106450 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(105755..106450) Campylobacter jejuni subsp. jejuni 81-176 4682509 YP_999811.1 CDS aspA NC_008787.1 106721 108127 D catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 106721..108127 Campylobacter jejuni subsp. jejuni 81-176 4682540 YP_999812.1 CDS dcuA NC_008787.1 108153 109481 D functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 108153..109481 Campylobacter jejuni subsp. jejuni 81-176 4683300 YP_999813.1 CDS CJJ81176_0124 NC_008787.1 109589 110950 D putative lipoprotein 109589..110950 Campylobacter jejuni subsp. jejuni 81-176 4683692 YP_999814.1 CDS CJJ81176_0125 NC_008787.1 110960 111328 D putative lipoprotein 110960..111328 Campylobacter jejuni subsp. jejuni 81-176 4683028 YP_999815.1 CDS CJJ81176_0126 NC_008787.1 111352 111975 D identified by match to protein family HMM TIGR02722; putative lipoprotein 111352..111975 Campylobacter jejuni subsp. jejuni 81-176 4683012 YP_999816.1 CDS CJJ81176_0127 NC_008787.1 112057 113394 D hypothetical protein 112057..113394 Campylobacter jejuni subsp. jejuni 81-176 4682096 YP_999817.1 CDS CJJ81176_0128 NC_008787.1 113404 114606 D hypothetical protein 113404..114606 Campylobacter jejuni subsp. jejuni 81-176 4683182 YP_999818.1 CDS rplU NC_008787.1 114765 115073 D identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 114765..115073 Campylobacter jejuni subsp. jejuni 81-176 4683472 YP_999819.1 CDS rpmA NC_008787.1 115084 115338 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 115084..115338 Campylobacter jejuni subsp. jejuni 81-176 4683508 YP_999820.1 CDS obgE NC_008787.1 115444 116514 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 115444..116514 Campylobacter jejuni subsp. jejuni 81-176 4682840 YP_999821.1 CDS proB NC_008787.1 116566 117357 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 116566..117357 Campylobacter jejuni subsp. jejuni 81-176 4683101 YP_999822.1 CDS fmt NC_008787.1 117431 118348 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 117431..118348 Campylobacter jejuni subsp. jejuni 81-176 4683400 YP_999823.1 CDS CJJ81176_0134 NC_008787.1 118311 118964 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 118311..118964 Campylobacter jejuni subsp. jejuni 81-176 4683464 YP_999824.1 CDS CJJ81176_0135 NC_008787.1 118961 119746 D identified by match to protein family HMM PF01656; ParA family chromosome partitioning ATPase 118961..119746 Campylobacter jejuni subsp. jejuni 81-176 4683278 YP_999825.1 CDS CJJ81176_0136 NC_008787.1 119752 120588 D identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB family chromosome partitioning protein 119752..120588 Campylobacter jejuni subsp. jejuni 81-176 4682866 YP_999826.1 CDS CJJ81176_0137 NC_008787.1 120649 121074 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 120649..121074 Campylobacter jejuni subsp. jejuni 81-176 4682196 YP_999827.1 CDS CJJ81176_0138 NC_008787.1 121085 121597 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 121085..121597 Campylobacter jejuni subsp. jejuni 81-176 4683438 YP_999828.1 CDS atpH NC_008787.1 121600 122121 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 121600..122121 Campylobacter jejuni subsp. jejuni 81-176 4682589 YP_999829.1 CDS atpA NC_008787.1 122135 123640 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 122135..123640 Campylobacter jejuni subsp. jejuni 81-176 4683520 YP_999830.1 CDS atpG NC_008787.1 123649 124533 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 123649..124533 Campylobacter jejuni subsp. jejuni 81-176 4683352 YP_999831.1 CDS atpD NC_008787.1 124558 125955 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 124558..125955 Campylobacter jejuni subsp. jejuni 81-176 4682363 YP_999832.1 CDS atpC NC_008787.1 125959 126348 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 125959..126348 Campylobacter jejuni subsp. jejuni 81-176 4683499 YP_999833.1 CDS CJJ81176_0144 NC_008787.1 126348 126902 D identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 126348..126902 Campylobacter jejuni subsp. jejuni 81-176 4682757 YP_999834.1 CDS CJJ81176_0145 NC_008787.1 126911 127300 D identified by match to protein family HMM PF02472; match to protein family HMM TIGR02801; TonB system transport protein ExbD, putative 126911..127300 Campylobacter jejuni subsp. jejuni 81-176 4683655 YP_999835.1 CDS CJJ81176_0146 NC_008787.1 127303 128082 D TonB domain-containing protein 127303..128082 Campylobacter jejuni subsp. jejuni 81-176 4682805 YP_999836.1 CDS tolB NC_008787.1 128092 129300 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 128092..129300 Campylobacter jejuni subsp. jejuni 81-176 4683715 YP_999837.1 CDS CJJ81176_0148 NC_008787.1 129377 129874 D identified by match to protein family HMM PF00691; match to protein family HMM TIGR02802; peptidoglycan-associated lipoprotein Omp18 129377..129874 Campylobacter jejuni subsp. jejuni 81-176 4683364 YP_999838.1 CDS CJJ81176_0149 NC_008787.1 129878 130825 D hypothetical protein 129878..130825 Campylobacter jejuni subsp. jejuni 81-176 4683459 YP_999839.1 CDS slyD NC_008787.1 130840 131415 D FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 130840..131415 Campylobacter jejuni subsp. jejuni 81-176 4682975 YP_999840.1 CDS fabD NC_008787.1 131415 132335 D identified by match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 131415..132335 Campylobacter jejuni subsp. jejuni 81-176 4682687 YP_999841.1 CDS mtnA NC_008787.1 132335 133021 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 132335..133021 Campylobacter jejuni subsp. jejuni 81-176 4682121 YP_999842.1 CDS CJJ81176_0153 NC_008787.1 133018 133773 D identified by match to protein family HMM PF01171; PP-loop family protein 133018..133773 Campylobacter jejuni subsp. jejuni 81-176 4683219 YP_999843.1 CDS CJJ81176_0154 NC_008787.1 133778 134299 D pyrazinamidase/nicotinamidase, putative 133778..134299 Campylobacter jejuni subsp. jejuni 81-176 4682425 YP_999844.1 CDS CJJ81176_0155 NC_008787.1 134299 134913 D putative recombination protein RecO 134299..134913 Campylobacter jejuni subsp. jejuni 81-176 4683226 YP_999845.1 CDS CJJ81176_0156 NC_008787.1 134910 135314 D identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; putative metalloprotease 134910..135314 Campylobacter jejuni subsp. jejuni 81-176 4683398 YP_999846.1 CDS CJJ81176_0157 NC_008787.1 135405 136658 D hypothetical protein 135405..136658 Campylobacter jejuni subsp. jejuni 81-176 4682761 YP_999847.1 CDS dusB NC_008787.1 136655 137572 R identified by match to protein family HMM PF01207; tRNA-dihydrouridine synthase B complement(136655..137572) Campylobacter jejuni subsp. jejuni 81-176 4682247 YP_999848.1 CDS CJJ81176_0159 NC_008787.1 137569 138429 R hypothetical protein complement(137569..138429) Campylobacter jejuni subsp. jejuni 81-176 4683677 YP_999849.1 CDS CJJ81176_0160 NC_008787.1 138545 138907 R identified by match to protein family HMM PF01258; dnaK suppressor protein, putative complement(138545..138907) Campylobacter jejuni subsp. jejuni 81-176 4682920 YP_999850.1 CDS CJJ81176_0161 NC_008787.1 138919 139368 R identified by match to protein family HMM PF02590; hypothetical protein complement(138919..139368) Campylobacter jejuni subsp. jejuni 81-176 4683408 YP_999851.1 CDS accD NC_008787.1 139370 140212 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(139370..140212) Campylobacter jejuni subsp. jejuni 81-176 4682752 YP_999852.1 CDS CJJ81176_0163 NC_008787.1 140221 140943 R identified by match to protein family HMM PF00459; inositol monophosphatase family protein complement(140221..140943) Campylobacter jejuni subsp. jejuni 81-176 4683740 YP_999853.1 CDS CJJ81176_0164 NC_008787.1 140943 143162 R identified by match to protein family HMM PF01103; match to protein family HMM PF07244; OMP85 family outer membrane protein complement(140943..143162) Campylobacter jejuni subsp. jejuni 81-176 4682724 YP_999854.1 CDS tyrA NC_008787.1 143239 144066 D catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 143239..144066 Campylobacter jejuni subsp. jejuni 81-176 4683446 YP_999855.1 CDS CJJ81176_0166 NC_008787.1 144146 145519 D identified by match to protein family HMM PF01551; M24/M37 family peptidase 144146..145519 Campylobacter jejuni subsp. jejuni 81-176 4683378 YP_999856.1 CDS lpxC NC_008787.1 145519 146403 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 145519..146403 Campylobacter jejuni subsp. jejuni 81-176 4683421 YP_999857.1 CDS CJJ81176_0168 NC_008787.1 146442 146843 D hypothetical protein 146442..146843 Campylobacter jejuni subsp. jejuni 81-176 4683383 YP_999858.1 CDS thrB NC_008787.1 146852 147730 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 146852..147730 Campylobacter jejuni subsp. jejuni 81-176 4682508 YP_999859.1 CDS CJJ81176_0170 NC_008787.1 147755 148012 D identified by match to protein family HMM PF04296; hypothetical protein 147755..148012 Campylobacter jejuni subsp. jejuni 81-176 4683016 YP_999860.1 CDS infB NC_008787.1 147999 150614 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 147999..150614 Campylobacter jejuni subsp. jejuni 81-176 4682810 YP_999861.1 CDS rbfA NC_008787.1 150611 150973 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 150611..150973 Campylobacter jejuni subsp. jejuni 81-176 4683026 YP_999862.1 CDS CJJ81176_0173 NC_008787.1 150963 151385 D identified by match to protein family HMM PF02576; hypothetical protein 150963..151385 Campylobacter jejuni subsp. jejuni 81-176 4682403 YP_999863.1 CDS CJJ81176_0174 NC_008787.1 151590 153401 D identified by match to protein family HMM PF07728; McrBC restriction endonuclease system, McrB subunit, putative 151590..153401 Campylobacter jejuni subsp. jejuni 81-176 4683145 YP_999864.1 CDS CJJ81176_0175 NC_008787.1 153401 153880 D hypothetical protein 153401..153880 Campylobacter jejuni subsp. jejuni 81-176 4683529 YP_999865.1 CDS CJJ81176_0176 NC_008787.1 153871 154737 D hypothetical protein 153871..154737 Campylobacter jejuni subsp. jejuni 81-176 4683301 YP_999866.1 CDS CJJ81176_0177 NC_008787.1 154726 155529 R identified by match to protein family HMM PF00950; match to protein family HMM PF01032; cation ABC transporter, permease protein complement(154726..155529) Campylobacter jejuni subsp. jejuni 81-176 4682856 YP_999867.1 CDS CJJ81176_0178 NC_008787.1 155522 156376 R identified by match to protein family HMM PF00005; cation ABC transporter, ATP-binding protein complement(155522..156376) Campylobacter jejuni subsp. jejuni 81-176 4682457 YP_999868.1 CDS CJJ81176_0179 NC_008787.1 156389 157279 R identified by match to protein family HMM PF01297; cation ABC transporter, periplasmic cation-binding protein complement(156389..157279) Campylobacter jejuni subsp. jejuni 81-176 4683493 YP_999869.1 CDS CJJ81176_0180 NC_008787.1 157478 159457 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 157478..159457 Campylobacter jejuni subsp. jejuni 81-176 4683774 YP_999870.1 CDS CJJ81176_0181 NC_008787.1 159592 161373 D identified by match to protein family HMM PF05787; match to protein family HMM TIGR01409; hypothetical protein 159592..161373 Campylobacter jejuni subsp. jejuni 81-176 4683002 YP_999871.1 CDS trxB NC_008787.1 161411 162349 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase complement(161411..162349) Campylobacter jejuni subsp. jejuni 81-176 4683391 YP_999872.1 CDS trx NC_008787.1 162483 162797 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(162483..162797) Campylobacter jejuni subsp. jejuni 81-176 4683578 YP_999873.1 CDS CJJ81176_0184 NC_008787.1 162854 163192 R identified by match to protein family HMM PF02021; hypothetical protein complement(162854..163192) Campylobacter jejuni subsp. jejuni 81-176 4683477 YP_999874.1 CDS hom NC_008787.1 163192 164439 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(163192..164439) Campylobacter jejuni subsp. jejuni 81-176 4683334 YP_999875.1 CDS CJJ81176_0186 NC_008787.1 164443 165645 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(164443..165645) Campylobacter jejuni subsp. jejuni 81-176 4682601 YP_999876.1 CDS CJJ81176_0187 NC_008787.1 165657 166463 R hypothetical protein complement(165657..166463) Campylobacter jejuni subsp. jejuni 81-176 4683086 YP_999877.1 CDS CJJ81176_0188 NC_008787.1 166457 167395 R hypothetical protein complement(166457..167395) Campylobacter jejuni subsp. jejuni 81-176 4682202 YP_999878.1 CDS CJJ81176_0189 NC_008787.1 167388 168071 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase complement(167388..168071) Campylobacter jejuni subsp. jejuni 81-176 4683160 YP_999879.1 CDS CJJ81176_0190 NC_008787.1 168085 168909 R identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein complement(168085..168909) Campylobacter jejuni subsp. jejuni 81-176 4682419 YP_999880.1 CDS rpmE NC_008787.1 168912 169112 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(168912..169112) Campylobacter jejuni subsp. jejuni 81-176 4683548 YP_999881.1 CDS CJJ81176_0192 NC_008787.1 169191 169847 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(169191..169847) Campylobacter jejuni subsp. jejuni 81-176 4682572 YP_999882.1 CDS CJJ81176_0193 NC_008787.1 169849 170256 R hypothetical protein complement(169849..170256) Campylobacter jejuni subsp. jejuni 81-176 4683245 YP_999883.1 CDS CJJ81176_0194 NC_008787.1 170256 170681 R cytochrome c family protein complement(170256..170681) Campylobacter jejuni subsp. jejuni 81-176 4683479 YP_999884.1 CDS CJJ81176_0195 NC_008787.1 170681 171262 R 6-pyruvoyl tetrahydrobiopterin synthase-like protein complement(170681..171262) Campylobacter jejuni subsp. jejuni 81-176 4683503 YP_999885.1 CDS CJJ81176_0196 NC_008787.1 171259 172002 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(171259..172002) Campylobacter jejuni subsp. jejuni 81-176 4682635 YP_999886.1 CDS moaA NC_008787.1 172005 172967 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(172005..172967) Campylobacter jejuni subsp. jejuni 81-176 4683190 YP_999887.1 CDS CJJ81176_0198 NC_008787.1 172980 173495 R hypothetical protein complement(172980..173495) Campylobacter jejuni subsp. jejuni 81-176 4683632 YP_999888.1 CDS CJJ81176_0199 NC_008787.1 173492 173692 R hypothetical protein complement(173492..173692) Campylobacter jejuni subsp. jejuni 81-176 4682185 YP_999889.1 CDS ubiA NC_008787.1 173980 174864 R UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase complement(173980..174864) Campylobacter jejuni subsp. jejuni 81-176 4682749 YP_999890.1 CDS miaA NC_008787.1 174935 175804 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 174935..175804 Campylobacter jejuni subsp. jejuni 81-176 4683685 YP_999891.1 CDS CJJ81176_0202 NC_008787.1 175790 176353 R identified by match to protein family HMM PF02659; hypothetical protein complement(175790..176353) Campylobacter jejuni subsp. jejuni 81-176 4683209 YP_999892.1 CDS CJJ81176_0204 NC_008787.1 176711 176893 R hypothetical protein complement(176711..176893) Campylobacter jejuni subsp. jejuni 81-176 4682574 YP_999893.1 CDS sodB NC_008787.1 177161 177823 D identified by match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase, Fe 177161..177823 Campylobacter jejuni subsp. jejuni 81-176 4682282 YP_999894.1 CDS CJJ81176_0206 NC_008787.1 177892 178110 D hypothetical protein 177892..178110 Campylobacter jejuni subsp. jejuni 81-176 4683656 YP_999895.1 CDS CJJ81176_0207 NC_008787.1 178220 178582 D hypothetical protein 178220..178582 Campylobacter jejuni subsp. jejuni 81-176 4682743 YP_999896.1 CDS CJJ81176_0208 NC_008787.1 178595 179800 R identified by match to protein family HMM PF03435; saccharopine dehydrogenase complement(178595..179800) Campylobacter jejuni subsp. jejuni 81-176 4683771 YP_999897.1 CDS CJJ81176_0209 NC_008787.1 179842 180750 R identified by match to protein family HMM PF00005; iron ABC transporter, ATP binding subunit complement(179842..180750) Campylobacter jejuni subsp. jejuni 81-176 4683753 YP_999898.1 CDS CJJ81176_0210 NC_008787.1 180734 182350 R identified by match to protein family HMM PF00528; iron ABC transporter, permease protein complement(180734..182350) Campylobacter jejuni subsp. jejuni 81-176 4683124 YP_999899.1 CDS CJJ81176_0211 NC_008787.1 182350 183354 R identified by match to protein family HMM PF01547; iron ABC transporter, periplasmic iron-binding protein complement(182350..183354) Campylobacter jejuni subsp. jejuni 81-176 4682692 YP_999900.1 CDS CJJ81176_0212 NC_008787.1 183365 183481 R hypothetical protein complement(183365..183481) Campylobacter jejuni subsp. jejuni 81-176 4682230 YP_999901.1 CDS CJJ81176_0213 NC_008787.1 183674 184873 D in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; putative transporter 183674..184873 Campylobacter jejuni subsp. jejuni 81-176 4682295 YP_999902.1 CDS CJJ81176_0214 NC_008787.1 185044 186330 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; transporter, putative 185044..186330 Campylobacter jejuni subsp. jejuni 81-176 4683750 YP_999903.1 CDS CJJ81176_0215 NC_008787.1 186343 187527 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(186343..187527) Campylobacter jejuni subsp. jejuni 81-176 4682388 YP_999904.1 CDS CJJ81176_0216 NC_008787.1 187537 187746 R identified by match to protein family HMM PF03831; PhnA domain-containing protein complement(187537..187746) Campylobacter jejuni subsp. jejuni 81-176 4682175 YP_999905.1 CDS CJJ81176_0217 NC_008787.1 187739 188458 R identified by match to protein family HMM PF03741; TerC family integral membrane protein complement(187739..188458) Campylobacter jejuni subsp. jejuni 81-176 4683014 YP_999906.1 CDS purN NC_008787.1 188530 189096 R identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase complement(188530..189096) Campylobacter jejuni subsp. jejuni 81-176 4682341 YP_999907.1 CDS CJJ81176_0219 NC_008787.1 189087 190457 R identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; hypothetical protein complement(189087..190457) Campylobacter jejuni subsp. jejuni 81-176 4683331 YP_999908.1 CDS CJJ81176_0220 NC_008787.1 190441 191139 R identified by match to protein family HMM PF01936; hypothetical protein complement(190441..191139) Campylobacter jejuni subsp. jejuni 81-176 4682080 YP_999909.1 CDS CJJ81176_0221 NC_008787.1 191141 192646 R identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg chelatase-related protein complement(191141..192646) Campylobacter jejuni subsp. jejuni 81-176 4683637 YP_999910.1 CDS def NC_008787.1 192643 193170 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(192643..193170) Campylobacter jejuni subsp. jejuni 81-176 4682275 YP_999911.1 CDS clpP NC_008787.1 193206 193790 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(193206..193790) Campylobacter jejuni subsp. jejuni 81-176 4682263 YP_999912.1 CDS tig NC_008787.1 193790 195124 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(193790..195124) Campylobacter jejuni subsp. jejuni 81-176 4682507 YP_999913.1 CDS folE NC_008787.1 195268 195840 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 195268..195840 Campylobacter jejuni subsp. jejuni 81-176 4683363 YP_999914.1 CDS fliI NC_008787.1 195840 197225 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 195840..197225 Campylobacter jejuni subsp. jejuni 81-176 4683388 YP_999915.1 CDS purF NC_008787.1 197228 198565 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(197228..198565) Campylobacter jejuni subsp. jejuni 81-176 4682992 YP_999916.1 CDS dapB NC_008787.1 198567 199295 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(198567..199295) Campylobacter jejuni subsp. jejuni 81-176 4682912 YP_999917.1 CDS CJJ81176_0229 NC_008787.1 199358 200539 R identified by match to protein family HMM PF00004; recombination factor protein RarA complement(199358..200539) Campylobacter jejuni subsp. jejuni 81-176 4682800 YP_999918.1 CDS CJJ81176_0230 NC_008787.1 200539 201666 R hypothetical protein complement(200539..201666) Campylobacter jejuni subsp. jejuni 81-176 4682111 YP_999919.1 CDS CJJ81176_0231 NC_008787.1 201801 202148 R hypothetical protein complement(201801..202148) Campylobacter jejuni subsp. jejuni 81-176 4683547 YP_999920.1 CDS CJJ81176_0232 NC_008787.1 202247 202852 R hypothetical protein complement(202247..202852) Campylobacter jejuni subsp. jejuni 81-176 4682310 YP_999921.1 CDS CJJ81176_0233 NC_008787.1 202803 203030 R hypothetical protein complement(202803..203030) Campylobacter jejuni subsp. jejuni 81-176 4682101 YP_999922.1 CDS CJJ81176_0234 NC_008787.1 203008 203145 R hypothetical protein complement(203008..203145) Campylobacter jejuni subsp. jejuni 81-176 4682653 YP_999923.1 CDS CJJ81176_0235 NC_008787.1 203388 204734 D identified by match to protein family HMM PF03600; match to protein family HMM PF06808; citrate transporter, authentic frameshift 203388..204734 Campylobacter jejuni subsp. jejuni 81-176 4682911 YP_999924.1 CDS CJJ81176_0236 NC_008787.1 204920 206914 D identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733; OPT family oligopeptide transporter 204920..206914 Campylobacter jejuni subsp. jejuni 81-176 4682225 YP_999925.1 CDS CJJ81176_0237 NC_008787.1 206988 207791 D identified by match to protein family HMM PF02673; match to protein family HMM TIGR00753; undecaprenol kinase, putative 206988..207791 Campylobacter jejuni subsp. jejuni 81-176 4683150 YP_999926.1 CDS thrS NC_008787.1 207922 209730 D catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 207922..209730 Campylobacter jejuni subsp. jejuni 81-176 4682620 YP_999927.1 CDS infC NC_008787.1 209727 210245 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 209727..210245 Campylobacter jejuni subsp. jejuni 81-176 4683580 YP_999928.1 CDS CJJ81176_0240 NC_008787.1 210284 211375 D identified by match to protein family HMM PF02086; D12 class N6 adenine-specific DNA methyltransferase 210284..211375 Campylobacter jejuni subsp. jejuni 81-176 4683494 YP_999929.1 CDS CJJ81176_0241 NC_008787.1 211605 211730 D hypothetical protein 211605..211730 Campylobacter jejuni subsp. jejuni 81-176 4682803 YP_999930.1 CDS CJJ81176_0242 NC_008787.1 211850 212296 D hypothetical protein 211850..212296 Campylobacter jejuni subsp. jejuni 81-176 4682252 YP_999931.1 CDS CJJ81176_0243 NC_008787.1 212460 212690 D hypothetical protein 212460..212690 Campylobacter jejuni subsp. jejuni 81-176 4683679 YP_999932.1 CDS CJJ81176_0244 NC_008787.1 212753 213331 D hypothetical protein 212753..213331 Campylobacter jejuni subsp. jejuni 81-176 4682829 YP_999933.1 CDS CJJ81176_0245 NC_008787.1 213489 213752 D hypothetical protein 213489..213752 Campylobacter jejuni subsp. jejuni 81-176 4682241 YP_999934.1 CDS CJJ81176_0246 NC_008787.1 213727 213885 D pathogenicity domain-containing protein 213727..213885 Campylobacter jejuni subsp. jejuni 81-176 4682556 YP_999935.1 CDS CJJ81176_0247 NC_008787.1 214455 214622 D hypothetical protein 214455..214622 Campylobacter jejuni subsp. jejuni 81-176 4683437 YP_999936.1 CDS CJJ81176_0248 NC_008787.1 214736 214867 D pathogenicity protein, putative, truncation 214736..214867 Campylobacter jejuni subsp. jejuni 81-176 4683311 YP_999937.1 CDS argC NC_008787.1 214948 215976 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 214948..215976 Campylobacter jejuni subsp. jejuni 81-176 4682460 YP_999938.1 CDS CJJ81176_0250 NC_008787.1 215985 216431 D identified by match to protein family HMM PF00583; acetyltransferase 215985..216431 Campylobacter jejuni subsp. jejuni 81-176 4682323 YP_999939.1 CDS argB NC_008787.1 216441 217280 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 216441..217280 Campylobacter jejuni subsp. jejuni 81-176 4683552 YP_999940.1 CDS argD NC_008787.1 217290 218471 D identified by match to protein family HMM PF00202; match to protein family HMM TIGR00707; acetylornithine aminotransferase 217290..218471 Campylobacter jejuni subsp. jejuni 81-176 4683517 YP_999941.1 CDS pcm NC_008787.1 218491 219120 R catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase complement(218491..219120) Campylobacter jejuni subsp. jejuni 81-176 4682528 YP_999942.1 CDS CJJ81176_0254 NC_008787.1 219209 219757 D identified by match to protein family HMM PF00132; hexapaptide repeat-containing transferase 219209..219757 Campylobacter jejuni subsp. jejuni 81-176 4683199 YP_999943.1 CDS CJJ81176_0255 NC_008787.1 219726 221096 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(219726..221096) Campylobacter jejuni subsp. jejuni 81-176 4683544 YP_999944.1 CDS nrdF NC_008787.1 221086 222108 R B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta complement(221086..222108) Campylobacter jejuni subsp. jejuni 81-176 4682562 YP_999945.1 CDS CJJ81176_0257 NC_008787.1 222122 222532 R identified by match to protein family HMM PF06271; hypothetical protein complement(222122..222532) Campylobacter jejuni subsp. jejuni 81-176 4682990 YP_999946.1 CDS pyrE NC_008787.1 222533 223141 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(222533..223141) Campylobacter jejuni subsp. jejuni 81-176 4682147 YP_999947.1 CDS frr NC_008787.1 223144 223701 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(223144..223701) Campylobacter jejuni subsp. jejuni 81-176 4682861 YP_999948.1 CDS secG NC_008787.1 223717 224088 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG complement(223717..224088) Campylobacter jejuni subsp. jejuni 81-176 4682565 YP_999949.1 CDS CJJ81176_0261 NC_008787.1 224192 224887 R identified by match to protein family HMM PF01027; hypothetical protein complement(224192..224887) Campylobacter jejuni subsp. jejuni 81-176 4682895 YP_999950.1 CDS cynT NC_008787.1 225047 225682 D identified by match to protein family HMM PF00484; carbonic anhydrase 225047..225682 Campylobacter jejuni subsp. jejuni 81-176 4682547 YP_999951.1 CDS CJJ81176_0263 NC_008787.1 225679 227562 D identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein 225679..227562 Campylobacter jejuni subsp. jejuni 81-176 4683747 YP_999952.1 CDS CJJ81176_0264 NC_008787.1 227587 228558 R identified by match to protein family HMM PF01106; match to protein family HMM PF01592; match to protein family HMM PF04324; NifU family protein complement(227587..228558) Campylobacter jejuni subsp. jejuni 81-176 4683005 YP_999953.1 CDS CJJ81176_0265 NC_008787.1 228568 229749 R identified by match to protein family HMM PF00266; cysteine desulfurase, putative complement(228568..229749) Campylobacter jejuni subsp. jejuni 81-176 4682847 YP_999954.1 CDS CJJ81176_0266 NC_008787.1 229927 230328 R identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hypothetical protein complement(229927..230328) Campylobacter jejuni subsp. jejuni 81-176 4683289 YP_999955.1 CDS CJJ81176_0267 NC_008787.1 230465 231631 R hypothetical protein complement(230465..231631) Campylobacter jejuni subsp. jejuni 81-176 4682432 YP_999956.1 CDS CJJ81176_0268 NC_008787.1 231702 231830 R hypothetical protein complement(231702..231830) Campylobacter jejuni subsp. jejuni 81-176 4683551 YP_999957.1 CDS rpmI NC_008787.1 231787 231978 D identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 231787..231978 Campylobacter jejuni subsp. jejuni 81-176 4682492 YP_999958.1 CDS rplT NC_008787.1 232072 232425 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 232072..232425 Campylobacter jejuni subsp. jejuni 81-176 4682979 YP_999959.1 CDS CJJ81176_0271 NC_008787.1 232477 232731 R MCP-domain-containing signal transduction protein complement(232477..232731) Campylobacter jejuni subsp. jejuni 81-176 4682093 YP_999960.1 CDS CJJ81176_0272 NC_008787.1 233117 233290 R MCP-domain-containing signal transduction protein complement(233117..233290) Campylobacter jejuni subsp. jejuni 81-176 4683112 YP_999961.1 CDS CJJ81176_0273 NC_008787.1 233407 233778 R MCP-domain-containing signal transduction protein complement(233407..233778) Campylobacter jejuni subsp. jejuni 81-176 4683161 YP_999962.1 CDS CJJ81176_0274 NC_008787.1 233783 234454 R hypothetical protein complement(233783..234454) Campylobacter jejuni subsp. jejuni 81-176 4682649 YP_999963.1 CDS CJJ81176_0275 NC_008787.1 234632 235489 D hypothetical protein 234632..235489 Campylobacter jejuni subsp. jejuni 81-176 4683566 YP_999964.1 CDS CJJ81176_0276 NC_008787.1 235520 235996 D hypothetical protein 235520..235996 Campylobacter jejuni subsp. jejuni 81-176 4683731 YP_999965.1 CDS CJJ81176_0277 NC_008787.1 235965 237275 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein complement(235965..237275) Campylobacter jejuni subsp. jejuni 81-176 4682155 YP_999966.1 CDS CJJ81176_0278 NC_008787.1 237278 237433 R hypothetical protein complement(237278..237433) Campylobacter jejuni subsp. jejuni 81-176 4682830 YP_999967.1 CDS moaC NC_008787.1 237526 237999 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 237526..237999 Campylobacter jejuni subsp. jejuni 81-176 4683061 YP_999968.1 CDS CJJ81176_0280 NC_008787.1 237977 238240 D hypothetical protein 237977..238240 Campylobacter jejuni subsp. jejuni 81-176 4683060 YP_999969.1 CDS CJJ81176_0281 NC_008787.1 238254 239390 D hypothetical protein 238254..239390 Campylobacter jejuni subsp. jejuni 81-176 4682392 YP_999970.1 CDS xth NC_008787.1 239410 240189 R identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III complement(239410..240189) Campylobacter jejuni subsp. jejuni 81-176 4683277 YP_999971.1 CDS CJJ81176_0283 NC_008787.1 240286 241824 D identified by match to protein family HMM PF00884; match to protein family HMM PF08019; sulfatase, putative 240286..241824 Campylobacter jejuni subsp. jejuni 81-176 4683782 YP_999972.1 CDS dgkA NC_008787.1 241821 242177 D identified by match to protein family HMM PF01219; diacylglycerol kinase 241821..242177 Campylobacter jejuni subsp. jejuni 81-176 4683385 YP_999973.1 CDS CJJ81176_0285 NC_008787.1 242174 242419 D hypothetical protein 242174..242419 Campylobacter jejuni subsp. jejuni 81-176 4682522 YP_999974.1 CDS pyrC NC_008787.1 242409 243416 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 242409..243416 Campylobacter jejuni subsp. jejuni 81-176 4683480 YP_999975.1 CDS CJJ81176_0287 NC_008787.1 243441 243662 R hypothetical protein complement(243441..243662) Campylobacter jejuni subsp. jejuni 81-176 4682748 YP_999976.1 CDS CJJ81176_0288 NC_008787.1 243718 244437 R hypothetical protein complement(243718..244437) Campylobacter jejuni subsp. jejuni 81-176 4682086 YP_999977.1 CDS CJJ81176_0289 NC_008787.1 244517 246514 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; match to protein family HMM PF05581; methyl-accepting chemotaxis protein complement(244517..246514) Campylobacter jejuni subsp. jejuni 81-176 4682306 YP_999978.1 CDS CJJ81176_0290 NC_008787.1 246707 247582 D identified by match to protein family HMM PF02535; zinc transporter ZupT 246707..247582 Campylobacter jejuni subsp. jejuni 81-176 4682971 YP_999979.1 CDS CJJ81176_0291 NC_008787.1 247606 250122 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; biotin sulfoxide reductase complement(247606..250122) Campylobacter jejuni subsp. jejuni 81-176 4682214 YP_999980.1 CDS CJJ81176_0292 NC_008787.1 250133 250708 R putative cytochrome C-type haem-binding periplasmic protein complement(250133..250708) Campylobacter jejuni subsp. jejuni 81-176 4683154 YP_999981.1 CDS CJJ81176_0293 NC_008787.1 251189 251698 R hypothetical protein complement(251189..251698) Campylobacter jejuni subsp. jejuni 81-176 4683620 YP_999982.1 CDS CJJ81176_0294 NC_008787.1 251698 252207 R hypothetical protein complement(251698..252207) Campylobacter jejuni subsp. jejuni 81-176 4682549 YP_999983.1 CDS CJJ81176_0295 NC_008787.1 252241 253329 R identified by match to protein family HMM PF01145; SPFH domain-containing protein complement(252241..253329) Campylobacter jejuni subsp. jejuni 81-176 4682383 YP_999984.1 CDS ilvE NC_008787.1 253342 254256 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(253342..254256) Campylobacter jejuni subsp. jejuni 81-176 4682934 YP_999985.1 CDS CJJ81176_0297 NC_008787.1 254432 254638 D identified by match to protein family HMM PF01361; match to protein family HMM TIGR00013; 4-oxalocrotonate tautomerase family protein 254432..254638 Campylobacter jejuni subsp. jejuni 81-176 4682935 YP_999986.1 CDS CJJ81176_0298 NC_008787.1 254635 255090 D identified by match to protein family HMM PF00578; anti-oxidant AhpCTSA family protein 254635..255090 Campylobacter jejuni subsp. jejuni 81-176 4682356 YP_999987.1 CDS CJJ81176_0299 NC_008787.1 255090 256181 D identified by match to protein family HMM PF02677; hypothetical protein 255090..256181 Campylobacter jejuni subsp. jejuni 81-176 4683725 YP_999988.1 CDS fabZ NC_008787.1 256276 256716 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 256276..256716 Campylobacter jejuni subsp. jejuni 81-176 4682801 YP_999989.1 CDS lpxA NC_008787.1 256716 257507 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 256716..257507 Campylobacter jejuni subsp. jejuni 81-176 4682343 YP_999990.1 CDS clpX NC_008787.1 257500 258723 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 257500..258723 Campylobacter jejuni subsp. jejuni 81-176 4682665 YP_999991.1 CDS mreB NC_008787.1 258734 259774 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 258734..259774 Campylobacter jejuni subsp. jejuni 81-176 4682198 YP_999992.1 CDS CJJ81176_0304 NC_008787.1 259803 260513 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 259803..260513 Campylobacter jejuni subsp. jejuni 81-176 4683676 YP_999993.1 CDS carB NC_008787.1 260774 264043 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 260774..264043 Campylobacter jejuni subsp. jejuni 81-176 4682732 YP_999994.1 CDS CJJ81176_0306 NC_008787.1 264040 264462 D hypothetical protein 264040..264462 Campylobacter jejuni subsp. jejuni 81-176 4683307 YP_999995.1 CDS tal NC_008787.1 264463 265440 R Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase complement(264463..265440) Campylobacter jejuni subsp. jejuni 81-176 4682216 YP_999996.1 CDS serB NC_008787.1 265440 266063 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB complement(265440..266063) Campylobacter jejuni subsp. jejuni 81-176 4683543 YP_999997.1 CDS cheW NC_008787.1 266063 266584 R identified by match to protein family HMM PF01584; purine-binding chemotaxis protein CheW complement(266063..266584) Campylobacter jejuni subsp. jejuni 81-176 4683225 YP_999998.1 CDS cheA NC_008787.1 266589 268898 R identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; chemotaxis protein CheA complement(266589..268898) Campylobacter jejuni subsp. jejuni 81-176 4682610 YP_999999.1 CDS cheV NC_008787.1 268902 269858 R identified by match to protein family HMM PF00072; match to protein family HMM PF01584; chemotaxis protein CheV complement(268902..269858) Campylobacter jejuni subsp. jejuni 81-176 4682972 YP_001000000.1 CDS CJJ81176_0312 NC_008787.1 269851 270486 R hypothetical protein complement(269851..270486) Campylobacter jejuni subsp. jejuni 81-176 4682281 YP_001000001.1 CDS greA NC_008787.1 270619 271104 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(270619..271104) Campylobacter jejuni subsp. jejuni 81-176 4682793 YP_001000002.1 CDS lpxB NC_008787.1 271116 272210 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; ipid-A-disaccharide synthase complement(271116..272210) Campylobacter jejuni subsp. jejuni 81-176 4683657 YP_001000003.1 CDS CJJ81176_0315 NC_008787.1 272307 273059 R major antigenic peptide PEB3 complement(272307..273059) Campylobacter jejuni subsp. jejuni 81-176 4682380 YP_001000004.1 CDS CJJ81176_0316 NC_008787.1 273323 274219 R glycerol-3-phosphate transporter, authentic frameshift complement(273323..274219) Campylobacter jejuni subsp. jejuni 81-176 4683285 YP_001000005.1 CDS surE NC_008787.1 274474 275250 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 274474..275250 Campylobacter jejuni subsp. jejuni 81-176 4683354 YP_001000006.1 CDS CJJ81176_0318 NC_008787.1 275240 275893 D identified by match to protein family HMM PF00899; thiF family protein 275240..275893 Campylobacter jejuni subsp. jejuni 81-176 4683037 YP_001000007.1 CDS panD NC_008787.1 275968 276348 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(275968..276348) Campylobacter jejuni subsp. jejuni 81-176 4683745 YP_001000008.1 CDS panC NC_008787.1 276345 277193 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(276345..277193) Campylobacter jejuni subsp. jejuni 81-176 4682823 YP_001000009.1 CDS panB NC_008787.1 277204 278028 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(277204..278028) Campylobacter jejuni subsp. jejuni 81-176 4683549 YP_001000010.1 CDS modC NC_008787.1 278185 279075 R identified by match to protein family HMM PF00005; molybdenum ABC transporter, ATP-binding protein complement(278185..279075) Campylobacter jejuni subsp. jejuni 81-176 4682846 YP_001000011.1 CDS modB NC_008787.1 279085 279753 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR02141; molybdenum ABC transporter, permease protein complement(279085..279753) Campylobacter jejuni subsp. jejuni 81-176 4683066 YP_001000012.1 CDS CJJ81176_0324 NC_008787.1 279746 280051 R identified by match to protein family HMM PF03459; TOBE domain-containing protein complement(279746..280051) Campylobacter jejuni subsp. jejuni 81-176 4682681 YP_001000013.1 CDS modA NC_008787.1 280144 280893 R identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdenum ABC transporter, periplasmic molybdenum-binding protein complement(280144..280893) Campylobacter jejuni subsp. jejuni 81-176 4682496 YP_001000014.1 CDS CJJ81176_0326 NC_008787.1 280947 281633 R identified by match to protein family HMM TIGR02072; biotin biosynthesis protein BioC complement(280947..281633) Campylobacter jejuni subsp. jejuni 81-176 4682962 YP_001000015.1 CDS CJJ81176_0327 NC_008787.1 281630 282241 R identified by match to protein family HMM PF04301; hypothetical protein complement(281630..282241) Campylobacter jejuni subsp. jejuni 81-176 4683600 YP_001000016.1 CDS bioF NC_008787.1 282238 283380 R identified by match to protein family HMM PF00155; 8-amino-7-oxononanoate synthase complement(282238..283380) Campylobacter jejuni subsp. jejuni 81-176 4683220 YP_001000017.1 CDS bioA NC_008787.1 283447 284730 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase 283447..284730 Campylobacter jejuni subsp. jejuni 81-176 4682316 YP_001000018.1 CDS bioD NC_008787.1 284717 285322 R identified by match to protein family HMM TIGR00347; dethiobiotin synthetase complement(284717..285322) Campylobacter jejuni subsp. jejuni 81-176 4683435 YP_001000019.1 CDS CJJ81176_0331 NC_008787.1 285332 285646 R identified by match to protein family HMM PF00893; SMR family multidrug efflux pump complement(285332..285646) Campylobacter jejuni subsp. jejuni 81-176 4683604 YP_001000020.1 CDS CJJ81176_0332 NC_008787.1 285650 285988 R identified by match to protein family HMM PF00893; SMR family multidrug efflux pump complement(285650..285988) Campylobacter jejuni subsp. jejuni 81-176 4683265 YP_001000021.1 CDS rplY NC_008787.1 286122 286658 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 286122..286658 Campylobacter jejuni subsp. jejuni 81-176 4683271 YP_001000022.1 CDS pth NC_008787.1 286655 287200 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 286655..287200 Campylobacter jejuni subsp. jejuni 81-176 4682510 YP_001000023.1 CDS CJJ81176_0335 NC_008787.1 287202 288260 D identified by match to protein family HMM PF03739; hypothetical protein 287202..288260 Campylobacter jejuni subsp. jejuni 81-176 4683246 YP_001000024.1 CDS lysA NC_008787.1 288304 289512 D identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 288304..289512 Campylobacter jejuni subsp. jejuni 81-176 4683355 YP_001000025.1 CDS CJJ81176_0337 NC_008787.1 289514 290281 D identified by match to protein family HMM TIGR01460; HAD family hydrolase 289514..290281 Campylobacter jejuni subsp. jejuni 81-176 4682125 YP_001000026.1 CDS pheA NC_008787.1 290269 291342 D identified by match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM TIGR01807; chorismate mutase/prephenate dehydratase 290269..291342 Campylobacter jejuni subsp. jejuni 81-176 4682110 YP_001000027.1 CDS hisC NC_008787.1 291332 292426 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 291332..292426 Campylobacter jejuni subsp. jejuni 81-176 4683506 YP_001000028.1 CDS fliF NC_008787.1 292478 294160 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 292478..294160 Campylobacter jejuni subsp. jejuni 81-176 4683375 YP_001000029.1 CDS fliG NC_008787.1 294160 295188 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 294160..295188 Campylobacter jejuni subsp. jejuni 81-176 4682226 YP_001000030.1 CDS fliH NC_008787.1 295196 296026 D binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 295196..296026 Campylobacter jejuni subsp. jejuni 81-176 4682116 YP_001000031.1 CDS dxs NC_008787.1 296019 297866 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 296019..297866 Campylobacter jejuni subsp. jejuni 81-176 4683029 YP_001000032.1 CDS CJJ81176_0344 NC_008787.1 297952 298362 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 297952..298362 Campylobacter jejuni subsp. jejuni 81-176 4682109 YP_001000033.1 CDS CJJ81176_0345 NC_008787.1 298408 299604 D hypothetical protein 298408..299604 Campylobacter jejuni subsp. jejuni 81-176 4683495 YP_001000034.1 CDS ubiE NC_008787.1 299607 300314 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 299607..300314 Campylobacter jejuni subsp. jejuni 81-176 4683098 YP_001000035.1 CDS xseA NC_008787.1 300311 301474 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 300311..301474 Campylobacter jejuni subsp. jejuni 81-176 4683572 YP_001000036.1 CDS serC NC_008787.1 301484 302560 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 301484..302560 Campylobacter jejuni subsp. jejuni 81-176 4683215 YP_001000037.1 CDS CJJ81176_0349 NC_008787.1 302557 302907 D identified by match to protein family HMM PF01042; endoribonuclease L-PSP family protein 302557..302907 Campylobacter jejuni subsp. jejuni 81-176 4683682 YP_001000038.1 CDS fabH NC_008787.1 302904 303878 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III complement(302904..303878) Campylobacter jejuni subsp. jejuni 81-176 4682943 YP_001000039.1 CDS plsX NC_008787.1 303871 304857 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(303871..304857) Campylobacter jejuni subsp. jejuni 81-176 4682796 YP_001000040.1 CDS rpmF NC_008787.1 304863 305009 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(304863..305009) Campylobacter jejuni subsp. jejuni 81-176 4683090 YP_001000041.1 CDS CJJ81176_0353 NC_008787.1 305033 305386 R hypothetical protein complement(305033..305386) Campylobacter jejuni subsp. jejuni 81-176 4682937 YP_001000042.1 CDS ndk NC_008787.1 305387 305800 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(305387..305800) Campylobacter jejuni subsp. jejuni 81-176 4682366 YP_001000043.1 CDS CJJ81176_0355 NC_008787.1 305913 306197 R identified by match to protein family HMM PF00037; ferredoxin, 4Fe-4S complement(305913..306197) Campylobacter jejuni subsp. jejuni 81-176 4683189 YP_001000044.1 CDS CJJ81176_0356 NC_008787.1 306403 306999 D identified by match to protein family HMM PF00578; anti-oxidant AhpCTSA family protein 306403..306999 Campylobacter jejuni subsp. jejuni 81-176 4682424 YP_001000045.1 CDS flhB NC_008787.1 307118 308224 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 307118..308224 Campylobacter jejuni subsp. jejuni 81-176 4682192 YP_001000046.1 CDS motB NC_008787.1 308211 308954 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(308211..308954) Campylobacter jejuni subsp. jejuni 81-176 4682104 YP_001000047.1 CDS CJJ81176_0359 NC_008787.1 308957 309733 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(308957..309733) Campylobacter jejuni subsp. jejuni 81-176 4683521 YP_001000048.1 CDS polA NC_008787.1 309749 312388 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(309749..312388) Campylobacter jejuni subsp. jejuni 81-176 4683714 YP_001000049.1 CDS CJJ81176_0361 NC_008787.1 312552 312764 D major facilitator family transporter 312552..312764 Campylobacter jejuni subsp. jejuni 81-176 4682554 YP_001000050.1 CDS CJJ81176_0362 NC_008787.1 312848 312964 D inner membrane metabolite transport protein YdfJ 312848..312964 Campylobacter jejuni subsp. jejuni 81-176 4683540 YP_001000051.1 CDS CJJ81176_0363 NC_008787.1 313004 313912 D inner membrane metabolite transport protein YdfJ 313004..313912 Campylobacter jejuni subsp. jejuni 81-176 4682837 YP_001000052.1 CDS CJJ81176_0364 NC_008787.1 313909 314916 D identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase family protein 313909..314916 Campylobacter jejuni subsp. jejuni 81-176 4682964 YP_001000053.1 CDS CJJ81176_0365 NC_008787.1 314872 315315 R hypothetical protein complement(314872..315315) Campylobacter jejuni subsp. jejuni 81-176 4683607 YP_001000054.1 CDS uvrA NC_008787.1 315320 318145 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(315320..318145) Campylobacter jejuni subsp. jejuni 81-176 4682340 YP_001000055.1 CDS CJJ81176_0367 NC_008787.1 318218 319003 R identified by match to protein family HMM PF01925; hypothetical protein complement(318218..319003) Campylobacter jejuni subsp. jejuni 81-176 4683292 YP_001000056.1 CDS CJJ81176_0368 NC_008787.1 319126 319251 D hypothetical protein 319126..319251 Campylobacter jejuni subsp. jejuni 81-176 4683432 YP_001000057.1 CDS trpE NC_008787.1 319416 320666 D identified by match to protein family HMM PF00425; anthranilate synthase component I 319416..320666 Campylobacter jejuni subsp. jejuni 81-176 4682977 YP_001000058.1 CDS trpD NC_008787.1 320663 322264 D identified by match to protein family HMM PF00117; match to protein family HMM PF00591; match to protein family HMM TIGR00566; match to protein family HMM TIGR01245; anthranilate synthase component II 320663..322264 Campylobacter jejuni subsp. jejuni 81-176 4682354 YP_001000059.1 CDS trpF NC_008787.1 322251 322850 D identified by match to protein family HMM PF00697; N-(5'phosphoribosyl)anthranilate isomerase 322251..322850 Campylobacter jejuni subsp. jejuni 81-176 4683726 YP_001000060.1 CDS trpB NC_008787.1 322847 324025 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 322847..324025 Campylobacter jejuni subsp. jejuni 81-176 4682819 YP_001000061.1 CDS trpA NC_008787.1 324018 324767 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 324018..324767 Campylobacter jejuni subsp. jejuni 81-176 4682566 YP_001000062.1 CDS CJJ81176_0374 NC_008787.1 324838 325260 D hypothetical protein 324838..325260 Campylobacter jejuni subsp. jejuni 81-176 4683163 YP_001000063.1 CDS fliN NC_008787.1 325260 325568 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 325260..325568 Campylobacter jejuni subsp. jejuni 81-176 4683621 YP_001000064.1 CDS CJJ81176_0376 NC_008787.1 325569 326366 D hypothetical protein 325569..326366 Campylobacter jejuni subsp. jejuni 81-176 4682199 YP_001000065.1 CDS CJJ81176_0377 NC_008787.1 326363 327823 R identified by match to protein family HMM PF02541; Ppx/GppA family phosphatase complement(326363..327823) Campylobacter jejuni subsp. jejuni 81-176 4682726 YP_001000066.1 CDS CJJ81176_0378 NC_008787.1 327823 328068 R identified by match to protein family HMM PF00037; ferredoxin, 4Fe-4S complement(327823..328068) Campylobacter jejuni subsp. jejuni 81-176 4682870 YP_001000067.1 CDS CJJ81176_0379 NC_008787.1 328181 328852 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(328181..328852) Campylobacter jejuni subsp. jejuni 81-176 4683153 YP_001000068.1 CDS CJJ81176_0380 NC_008787.1 328931 329248 R identified by match to protein family HMM PF02152; FolB domain-containing protein complement(328931..329248) Campylobacter jejuni subsp. jejuni 81-176 4682186 YP_001000069.1 CDS CJJ81176_0381 NC_008787.1 329233 329841 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY complement(329233..329841) Campylobacter jejuni subsp. jejuni 81-176 4683361 YP_001000070.1 CDS ccpA-2 NC_008787.1 330036 331061 D identified by match to protein family HMM PF03150; cytochrome c551 peroxidase 330036..331061 Campylobacter jejuni subsp. jejuni 81-176 4683423 YP_001000071.1 CDS glmM NC_008787.1 331137 332492 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 331137..332492 Campylobacter jejuni subsp. jejuni 81-176 4683452 YP_001000072.1 CDS lspA NC_008787.1 332485 332955 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 332485..332955 Campylobacter jejuni subsp. jejuni 81-176 4682903 YP_001000073.1 CDS CJJ81176_0385 NC_008787.1 332939 333391 D identified by match to protein family HMM PF03653; match to protein family HMM TIGR00701; hypothetical protein 332939..333391 Campylobacter jejuni subsp. jejuni 81-176 4683719 YP_001000074.1 CDS CJJ81176_0386 NC_008787.1 333388 334734 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(333388..334734) Campylobacter jejuni subsp. jejuni 81-176 4682658 YP_001000075.1 CDS CJJ81176_0387 NC_008787.1 334863 335114 D hypothetical protein 334863..335114 Campylobacter jejuni subsp. jejuni 81-176 4683184 YP_001000076.1 CDS cmeC NC_008787.1 335137 336615 R identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; RND efflux system, outer membrane lipoprotein CmeC complement(335137..336615) Campylobacter jejuni subsp. jejuni 81-176 4683000 YP_001000077.1 CDS cmeB NC_008787.1 336608 339730 R identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; RND efflux system, inner membrane transporter CmeB complement(336608..339730) Campylobacter jejuni subsp. jejuni 81-176 4682137 YP_001000078.1 CDS cmeA NC_008787.1 339730 340833 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND efflux system, membrane fusion protein CmeA complement(339730..340833) Campylobacter jejuni subsp. jejuni 81-176 4683757 YP_001000079.1 CDS CJJ81176_0391 NC_008787.1 340928 341560 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(340928..341560) Campylobacter jejuni subsp. jejuni 81-176 4682564 YP_001000080.1 CDS CJJ81176_0392 NC_008787.1 341547 342923 R identified by match to protein family HMM PF00037; match to protein family HMM TIGR02745; iron-sulfur cluster-binding domain-containing protein complement(341547..342923) Campylobacter jejuni subsp. jejuni 81-176 4683590 YP_001000081.1 CDS rpsU NC_008787.1 343082 343294 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 343082..343294 Campylobacter jejuni subsp. jejuni 81-176 4683214 YP_001000082.1 CDS CJJ81176_0394 NC_008787.1 343291 343437 R colicin E1 immunity protein complement(343291..343437) Campylobacter jejuni subsp. jejuni 81-176 4683490 YP_001000083.1 CDS CJJ81176_0395 NC_008787.1 343411 344016 D hypothetical protein 343411..344016 Campylobacter jejuni subsp. jejuni 81-176 4682832 YP_001000084.1 CDS CJJ81176_0396 NC_008787.1 344026 345195 D identified by match to protein family HMM PF03738; glutathionylspermidine synthase family protein 344026..345195 Campylobacter jejuni subsp. jejuni 81-176 4682140 YP_001000085.1 CDS CJJ81176_0397 NC_008787.1 345198 346133 D Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 345198..346133 Campylobacter jejuni subsp. jejuni 81-176 4682737 YP_001000086.1 CDS CJJ81176_0398 NC_008787.1 346123 346614 D putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 346123..346614 Campylobacter jejuni subsp. jejuni 81-176 4682959 YP_001000087.1 CDS CJJ81176_0399 NC_008787.1 346623 347099 D putative lipoprotein 346623..347099 Campylobacter jejuni subsp. jejuni 81-176 4682334 YP_001000088.1 CDS CJJ81176_0400 NC_008787.1 347110 347934 D hypothetical protein 347110..347934 Campylobacter jejuni subsp. jejuni 81-176 4683239 YP_001000089.1 CDS CJJ81176_0401 NC_008787.1 347934 349646 D identified by match to protein family HMM PF00004; ATPase, AAA family protein 347934..349646 Campylobacter jejuni subsp. jejuni 81-176 4682481 YP_001000090.1 CDS CJJ81176_0402 NC_008787.1 349611 350183 R identified by match to protein family HMM PF01794; hypothetical protein complement(349611..350183) Campylobacter jejuni subsp. jejuni 81-176 4682727 YP_001000091.1 CDS CJJ81176_0403 NC_008787.1 350183 351076 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY complement(350183..351076) Campylobacter jejuni subsp. jejuni 81-176 4683411 YP_001000092.1 CDS pyrF NC_008787.1 351131 351811 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(351131..351811) Campylobacter jejuni subsp. jejuni 81-176 4682606 YP_001000093.1 CDS nusB NC_008787.1 351808 352206 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(351808..352206) Campylobacter jejuni subsp. jejuni 81-176 4682884 YP_001000094.1 CDS ribH NC_008787.1 352206 352670 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(352206..352670) Campylobacter jejuni subsp. jejuni 81-176 4682584 YP_001000095.1 CDS kdsA NC_008787.1 352667 353482 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(352667..353482) Campylobacter jejuni subsp. jejuni 81-176 4683270 YP_001000096.1 CDS CJJ81176_0408 NC_008787.1 353479 354411 R identified by match to protein family HMM PF00892; integral membrane protein complement(353479..354411) Campylobacter jejuni subsp. jejuni 81-176 4682255 YP_001000097.1 CDS engA NC_008787.1 354512 355894 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 354512..355894 Campylobacter jejuni subsp. jejuni 81-176 4683336 YP_001000098.1 CDS aroK NC_008787.1 355881 356378 D catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 355881..356378 Campylobacter jejuni subsp. jejuni 81-176 4682536 YP_001000099.1 CDS trpS NC_008787.1 356375 357334 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 356375..357334 Campylobacter jejuni subsp. jejuni 81-176 4683583 YP_001000100.1 CDS serS NC_008787.1 357345 358580 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 357345..358580 Campylobacter jejuni subsp. jejuni 81-176 4682634 YP_001000101.1 CDS CJJ81176_0413 NC_008787.1 358590 361052 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; TPR domain-containing protein 358590..361052 Campylobacter jejuni subsp. jejuni 81-176 4683030 YP_001000102.1 CDS CJJ81176_0414 NC_008787.1 361083 361718 R hypothetical protein complement(361083..361718) Campylobacter jejuni subsp. jejuni 81-176 4682480 YP_001000103.1 CDS pyk NC_008787.1 361816 363258 R identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase complement(361816..363258) Campylobacter jejuni subsp. jejuni 81-176 4683291 YP_001000104.1 CDS CJJ81176_0416 NC_008787.1 363307 364653 R identified by match to protein family HMM PF01266; match to protein family HMM PF06039; malate:quinone oxidoreductase, putative complement(363307..364653) Campylobacter jejuni subsp. jejuni 81-176 4683396 YP_001000105.1 CDS CJJ81176_0417 NC_008787.1 364772 365401 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(364772..365401) Campylobacter jejuni subsp. jejuni 81-176 4682117 YP_001000106.1 CDS CJJ81176_0418 NC_008787.1 365388 365678 R tram-like protein complement(365388..365678) Campylobacter jejuni subsp. jejuni 81-176 4683690 YP_001000107.1 CDS CJJ81176_0419 NC_008787.1 365675 366673 R putative lipoprotein complement(365675..366673) Campylobacter jejuni subsp. jejuni 81-176 4682742 YP_001000108.1 CDS CJJ81176_0420 NC_008787.1 366670 367248 R hypothetical protein complement(366670..367248) Campylobacter jejuni subsp. jejuni 81-176 4683721 YP_001000109.1 CDS gatC NC_008787.1 367392 367676 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 367392..367676 Campylobacter jejuni subsp. jejuni 81-176 4683001 YP_001000110.1 CDS CJJ81176_0422 NC_008787.1 367745 368308 D identified by match to protein family HMM PF02674; cvpA family protein 367745..368308 Campylobacter jejuni subsp. jejuni 81-176 4682543 YP_001000111.1 CDS fur NC_008787.1 368310 368783 D identified by match to protein family HMM PF01475; ferric uptake regulation protein 368310..368783 Campylobacter jejuni subsp. jejuni 81-176 4682662 YP_001000112.1 CDS lysS NC_008787.1 368784 370289 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 368784..370289 Campylobacter jejuni subsp. jejuni 81-176 4682795 YP_001000113.1 CDS glyA NC_008787.1 370286 371530 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 370286..371530 Campylobacter jejuni subsp. jejuni 81-176 4683711 YP_001000114.1 CDS CJJ81176_0427 NC_008787.1 371527 372306 D hypothetical protein 371527..372306 Campylobacter jejuni subsp. jejuni 81-176 4682814 YP_001000115.1 CDS CJJ81176_0428 NC_008787.1 372320 373156 D identified by match to protein family HMM PF05036; hypothetical protein 372320..373156 Campylobacter jejuni subsp. jejuni 81-176 4682654 YP_001000116.1 CDS aroE NC_008787.1 373153 373941 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 373153..373941 Campylobacter jejuni subsp. jejuni 81-176 4682797 YP_001000117.1 CDS CJJ81176_0430 NC_008787.1 374015 374914 R putative lipoprotein complement(374015..374914) Campylobacter jejuni subsp. jejuni 81-176 4683279 YP_001000118.1 CDS lgt NC_008787.1 375004 375819 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 375004..375819 Campylobacter jejuni subsp. jejuni 81-176 4682139 YP_001000119.1 CDS frdC NC_008787.1 375889 376671 D part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 375889..376671 Campylobacter jejuni subsp. jejuni 81-176 4683035 YP_001000120.1 CDS frdA NC_008787.1 376655 378646 D part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 376655..378646 Campylobacter jejuni subsp. jejuni 81-176 4682475 YP_001000121.1 CDS frdB NC_008787.1 378639 379364 D part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 378639..379364 Campylobacter jejuni subsp. jejuni 81-176 4682472 YP_001000122.1 CDS CJJ81176_0435 NC_008787.1 379392 381578 D identified by match to protein family HMM PF00350; match to protein family HMM PF01926; GTP-binding protein 379392..381578 Campylobacter jejuni subsp. jejuni 81-176 4683144 YP_001000123.1 CDS CJJ81176_0436 NC_008787.1 381688 383397 D identified by match to protein family HMM PF00350; match to protein family HMM PF01926; GTP-binding protein 381688..383397 Campylobacter jejuni subsp. jejuni 81-176 4682369 YP_001000124.1 CDS CJJ81176_0437 NC_008787.1 383397 384101 D hypothetical protein 383397..384101 Campylobacter jejuni subsp. jejuni 81-176 4682918 YP_001000125.1 CDS CJJ81176_0438 NC_008787.1 384237 384965 D hypothetical protein 384237..384965 Campylobacter jejuni subsp. jejuni 81-176 4683720 YP_001000126.1 CDS CJJ81176_0439 NC_008787.1 384967 386688 D identified by match to protein family HMM PF00732; oxidoreductase, putative 384967..386688 Campylobacter jejuni subsp. jejuni 81-176 4683040 YP_001000127.1 CDS CJJ81176_0440 NC_008787.1 386977 387168 D hypothetical protein 386977..387168 Campylobacter jejuni subsp. jejuni 81-176 4682297 YP_001000128.1 CDS CJJ81176_0441 NC_008787.1 387247 387972 R hypothetical protein complement(387247..387972) Campylobacter jejuni subsp. jejuni 81-176 4682955 YP_001000129.1 CDS CJJ81176_0442 NC_008787.1 388079 388441 D HIT family protein 388079..388441 Campylobacter jejuni subsp. jejuni 81-176 4683164 YP_001000130.1 CDS CJJ81176_0443 NC_008787.1 388515 389087 D identified by match to protein family HMM PF04264; hypothetical protein 388515..389087 Campylobacter jejuni subsp. jejuni 81-176 4682286 YP_001000131.1 CDS CJJ81176_0444 NC_008787.1 389091 390047 R hypothetical protein complement(389091..390047) Campylobacter jejuni subsp. jejuni 81-176 4683541 YP_001000132.1 CDS CJJ81176_0445 NC_008787.1 390020 390169 D hypothetical protein 390020..390169 Campylobacter jejuni subsp. jejuni 81-176 4682435 YP_001000133.1 CDS CJJ81176_0446 NC_008787.1 390215 391792 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 390215..391792 Campylobacter jejuni subsp. jejuni 81-176 4682348 YP_001000134.1 CDS CJJ81176_0447 NC_008787.1 391785 392117 D hypothetical protein 391785..392117 Campylobacter jejuni subsp. jejuni 81-176 4683240 YP_001000135.1 CDS CJJ81176_0448 NC_008787.1 392193 392576 D hypothetical protein 392193..392576 Campylobacter jejuni subsp. jejuni 81-176 4683062 YP_001000136.1 CDS CJJ81176_0449 NC_008787.1 392620 393204 R identified by match to protein family HMM PF01205; hypothetical protein complement(392620..393204) Campylobacter jejuni subsp. jejuni 81-176 4682143 YP_001000137.1 CDS CJJ81176_0450 NC_008787.1 393331 394557 D hypothetical protein 393331..394557 Campylobacter jejuni subsp. jejuni 81-176 4683325 YP_001000138.1 CDS CJJ81176_0451 NC_008787.1 394550 395287 D hypothetical protein 394550..395287 Campylobacter jejuni subsp. jejuni 81-176 4682579 YP_001000139.1 CDS CJJ81176_0456 NC_008787.1 401151 401303 R hypothetical protein complement(401151..401303) Campylobacter jejuni subsp. jejuni 81-176 4682184 YP_001000140.1 CDS murD NC_008787.1 401632 402840 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(401632..402840) Campylobacter jejuni subsp. jejuni 81-176 4682142 YP_001000141.1 CDS mraY NC_008787.1 402840 403901 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(402840..403901) Campylobacter jejuni subsp. jejuni 81-176 4683555 YP_001000142.1 CDS pgm NC_008787.1 403981 405459 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 403981..405459 Campylobacter jejuni subsp. jejuni 81-176 4682786 YP_001000143.1 CDS fabG NC_008787.1 405531 406274 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 405531..406274 Campylobacter jejuni subsp. jejuni 81-176 4683308 YP_001000144.1 CDS CJJ81176_0462 NC_008787.1 406284 406691 D identified by match to protein family HMM PF01243; hypothetical protein 406284..406691 Campylobacter jejuni subsp. jejuni 81-176 4682390 YP_001000145.1 CDS sdhA NC_008787.1 407028 408863 D identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM TIGR01409; succinate dehydrogenase, flavoprotein subunit 407028..408863 Campylobacter jejuni subsp. jejuni 81-176 4682784 YP_001000146.1 CDS sdhB NC_008787.1 408860 409825 D identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; succinate dehydrogenase, iron-sulfur protein subunit 408860..409825 Campylobacter jejuni subsp. jejuni 81-176 4683096 YP_001000147.1 CDS sdhC NC_008787.1 409829 410686 D identified by match to protein family HMM PF02754; succinate dehydrogenase, C subunit 409829..410686 Campylobacter jejuni subsp. jejuni 81-176 4682195 YP_001000148.1 CDS CJJ81176_0466 NC_008787.1 410710 411375 R identified by match to protein family HMM PF03070; TenA/Thi-4 family protein complement(410710..411375) Campylobacter jejuni subsp. jejuni 81-176 4682740 YP_001000149.1 CDS CJJ81176_0467 NC_008787.1 411353 411469 D hypothetical protein 411353..411469 Campylobacter jejuni subsp. jejuni 81-176 4683256 YP_001000150.1 CDS acpP NC_008787.1 411488 411721 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 411488..411721 Campylobacter jejuni subsp. jejuni 81-176 4682949 YP_001000151.1 CDS fabF NC_008787.1 411747 412961 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 411747..412961 Campylobacter jejuni subsp. jejuni 81-176 4683703 YP_001000152.1 CDS accA NC_008787.1 412963 413901 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 412963..413901 Campylobacter jejuni subsp. jejuni 81-176 4682708 YP_001000153.1 CDS CJJ81176_0471 NC_008787.1 413993 416107 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor, putative, degenerate 413993..416107 Campylobacter jejuni subsp. jejuni 81-176 4683395 YP_001000154.1 CDS CJJ81176_0472 NC_008787.1 416190 416786 D identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052; NUDIX domain-containing protein 416190..416786 Campylobacter jejuni subsp. jejuni 81-176 4682596 YP_001000155.1 CDS CJJ81176_0473 NC_008787.1 416818 417915 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(416818..417915) Campylobacter jejuni subsp. jejuni 81-176 4683659 YP_001000156.1 CDS CJJ81176_0474 NC_008787.1 417925 418140 R identified by match to protein family HMM PF04325; hypothetical protein complement(417925..418140) Campylobacter jejuni subsp. jejuni 81-176 4683015 YP_001000157.1 CDS rpmB NC_008787.1 418323 418517 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(418323..418517) Campylobacter jejuni subsp. jejuni 81-176 4683515 YP_001000158.1 CDS rpe NC_008787.1 418657 419304 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 418657..419304 Campylobacter jejuni subsp. jejuni 81-176 4682769 YP_001000159.1 CDS CJJ81176_0477 NC_008787.1 419301 420062 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 419301..420062 Campylobacter jejuni subsp. jejuni 81-176 4682411 YP_001000160.1 CDS thiC NC_008787.1 420245 421537 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 420245..421537 Campylobacter jejuni subsp. jejuni 81-176 4683455 YP_001000161.1 CDS CJJ81176_0479 NC_008787.1 421529 422047 R hypothetical protein complement(421529..422047) Campylobacter jejuni subsp. jejuni 81-176 4682909 YP_001000162.1 CDS CJJ81176_0480 NC_008787.1 422037 422564 R hypothetical protein complement(422037..422564) Campylobacter jejuni subsp. jejuni 81-176 4682798 YP_001000163.1 CDS CJJ81176_0481 NC_008787.1 422561 423520 R hypothetical protein complement(422561..423520) Campylobacter jejuni subsp. jejuni 81-176 4682149 YP_001000164.1 CDS CJJ81176_0482 NC_008787.1 423522 424172 R identified by match to protein family HMM PF04028; hypothetical protein complement(423522..424172) Campylobacter jejuni subsp. jejuni 81-176 4683681 YP_001000165.1 CDS miaB NC_008787.1 424135 425436 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(424135..425436) Campylobacter jejuni subsp. jejuni 81-176 4683234 YP_001000166.1 CDS CJJ81176_0484 NC_008787.1 425433 425675 R hypothetical protein complement(425433..425675) Campylobacter jejuni subsp. jejuni 81-176 4683373 YP_001000167.1 CDS nusA NC_008787.1 425803 426891 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 425803..426891 Campylobacter jejuni subsp. jejuni 81-176 4682896 YP_001000168.1 CDS CJJ81176_0486 NC_008787.1 426907 428094 R identified by match to protein family HMM PF04332; match to protein family HMM PF07690; transporter, putative complement(426907..428094) Campylobacter jejuni subsp. jejuni 81-176 4682663 YP_001000169.1 CDS CJJ81176_0487 NC_008787.1 428168 429214 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; hypothetical protein 428168..429214 Campylobacter jejuni subsp. jejuni 81-176 4682688 YP_001000170.1 CDS CJJ81176_0488 NC_008787.1 429214 430434 D identified by match to protein family HMM PF05193; peptidase, putative 429214..430434 Campylobacter jejuni subsp. jejuni 81-176 4682244 YP_001000171.1 CDS recG NC_008787.1 430424 432247 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 430424..432247 Campylobacter jejuni subsp. jejuni 81-176 4683268 YP_001000172.1 CDS CJJ81176_0490 NC_008787.1 432244 432627 R hypothetical protein complement(432244..432627) Campylobacter jejuni subsp. jejuni 81-176 4682444 YP_001000173.1 CDS CJJ81176_0491 NC_008787.1 432713 433318 D identified by match to protein family HMM PF00027; putative transcriptional regulator 432713..433318 Campylobacter jejuni subsp. jejuni 81-176 4683290 YP_001000174.1 CDS CJJ81176_0492 NC_008787.1 433335 434036 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 433335..434036 Campylobacter jejuni subsp. jejuni 81-176 4683042 YP_001000175.1 CDS CJJ81176_0493 NC_008787.1 434029 434685 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 434029..434685 Campylobacter jejuni subsp. jejuni 81-176 4682787 YP_001000176.1 CDS CJJ81176_0494 NC_008787.1 434687 435424 D identified by match to protein family HMM PF00005; amino acid ABC transporter, ATP-binding protein 434687..435424 Campylobacter jejuni subsp. jejuni 81-176 4682161 YP_001000177.1 CDS tuf NC_008787.1 436080 437279 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 436080..437279 Campylobacter jejuni subsp. jejuni 81-176 4682314 YP_001000178.1 CDS rpmG NC_008787.1 437332 437490 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 437332..437490 Campylobacter jejuni subsp. jejuni 81-176 4682200 YP_001000179.1 CDS secE NC_008787.1 437597 437776 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 437597..437776 Campylobacter jejuni subsp. jejuni 81-176 4682597 YP_001000180.1 CDS nusG NC_008787.1 437786 438319 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 437786..438319 Campylobacter jejuni subsp. jejuni 81-176 4683168 YP_001000181.1 CDS rplK NC_008787.1 438345 438770 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 438345..438770 Campylobacter jejuni subsp. jejuni 81-176 4683777 YP_001000182.1 CDS rplA NC_008787.1 438825 439526 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 438825..439526 Campylobacter jejuni subsp. jejuni 81-176 4682721 YP_001000183.1 CDS rplJ NC_008787.1 439678 440157 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 439678..440157 Campylobacter jejuni subsp. jejuni 81-176 4683706 YP_001000184.1 CDS rplL NC_008787.1 440178 440555 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 440178..440555 Campylobacter jejuni subsp. jejuni 81-176 4682178 YP_001000185.1 CDS rpoB NC_008787.1 440665 444801 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 440665..444801 Campylobacter jejuni subsp. jejuni 81-176 4683081 YP_001000186.1 CDS rpoC NC_008787.1 444794 449347 D identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase, beta' subunit 444794..449347 Campylobacter jejuni subsp. jejuni 81-176 4683228 YP_001000187.1 CDS rpsL NC_008787.1 449467 449853 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 449467..449853 Campylobacter jejuni subsp. jejuni 81-176 4682326 YP_001000188.1 CDS rpsG NC_008787.1 449923 450393 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 449923..450393 Campylobacter jejuni subsp. jejuni 81-176 4682210 YP_001000189.1 CDS fusA NC_008787.1 450406 452481 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 450406..452481 Campylobacter jejuni subsp. jejuni 81-176 4682358 YP_001000190.1 CDS CJJ81176_0515 NC_008787.1 452604 452753 D hypothetical protein 452604..452753 Campylobacter jejuni subsp. jejuni 81-176 4682713 YP_001000191.1 CDS CJJ81176_0516 NC_008787.1 452759 453460 D identified by match to protein family HMM PF05175; hypothetical protein 452759..453460 Campylobacter jejuni subsp. jejuni 81-176 4682699 YP_001000192.1 CDS CJJ81176_0517 NC_008787.1 453450 453824 D identified by match to protein family HMM PF03692; hypothetical protein 453450..453824 Campylobacter jejuni subsp. jejuni 81-176 4683386 YP_001000193.1 CDS CJJ81176_0518 NC_008787.1 453836 455074 D putative lipoprotein 453836..455074 Campylobacter jejuni subsp. jejuni 81-176 4682673 YP_001000194.1 CDS trpC NC_008787.1 455071 455847 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 455071..455847 Campylobacter jejuni subsp. jejuni 81-176 4683069 YP_001000195.1 CDS CJJ81176_0520 NC_008787.1 455857 456342 D identified by match to protein family HMM PF01230; Hit family protein 455857..456342 Campylobacter jejuni subsp. jejuni 81-176 4682135 YP_001000196.1 CDS ybbB NC_008787.1 456332 457336 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 456332..457336 Campylobacter jejuni subsp. jejuni 81-176 4682763 YP_001000197.1 CDS CJJ81176_0522 NC_008787.1 457709 457825 R hypothetical protein complement(457709..457825) Campylobacter jejuni subsp. jejuni 81-176 4683653 YP_001000198.1 CDS CJJ81176_0523 NC_008787.1 457960 458142 D hypothetical protein 457960..458142 Campylobacter jejuni subsp. jejuni 81-176 4682113 YP_001000199.1 CDS CJJ81176_0524 NC_008787.1 458144 458299 D putative periplasmic protein 458144..458299 Campylobacter jejuni subsp. jejuni 81-176 4683627 YP_001000200.1 CDS CJJ81176_0525 NC_008787.1 458296 458739 D putative periplasmic protein 458296..458739 Campylobacter jejuni subsp. jejuni 81-176 4683649 YP_001000201.1 CDS CJJ81176_0526 NC_008787.1 458769 458885 D putative periplasmic protein 458769..458885 Campylobacter jejuni subsp. jejuni 81-176 4682603 YP_001000202.1 CDS CJJ81176_0527 NC_008787.1 458930 459799 D putative periplasmic protein 458930..459799 Campylobacter jejuni subsp. jejuni 81-176 4683151 YP_001000203.1 CDS CJJ81176_0528 NC_008787.1 460185 460313 D hypothetical protein 460185..460313 Campylobacter jejuni subsp. jejuni 81-176 4683535 YP_001000204.1 CDS CJJ81176_0529 NC_008787.1 460410 462071 D identified by match to protein family HMM PF05860; match to protein family HMM TIGR01901; putative periplasmic protein 460410..462071 Campylobacter jejuni subsp. jejuni 81-176 4682182 YP_001000205.1 CDS CJJ81176_0530 NC_008787.1 462333 463988 D identified by match to protein family HMM PF01103; putative outer-membrane protein 462333..463988 Campylobacter jejuni subsp. jejuni 81-176 4682395 YP_001000206.1 CDS hemH NC_008787.1 463992 464921 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(463992..464921) Campylobacter jejuni subsp. jejuni 81-176 4682394 YP_001000207.1 CDS CJJ81176_0532 NC_008787.1 464918 465784 R identified by match to protein family HMM PF01408; Gfo/Idh/MocA family oxidoreductase complement(464918..465784) Campylobacter jejuni subsp. jejuni 81-176 4683532 YP_001000208.1 CDS CJJ81176_0533 NC_008787.1 465789 466862 R identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; DegT/DnrJ/EryC1/StrS aminotransferase family protein complement(465789..466862) Campylobacter jejuni subsp. jejuni 81-176 4682463 YP_001000209.1 CDS alaS NC_008787.1 466977 469505 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 466977..469505 Campylobacter jejuni subsp. jejuni 81-176 4683267 YP_001000210.1 CDS CJJ81176_0535 NC_008787.1 469505 470056 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 469505..470056 Campylobacter jejuni subsp. jejuni 81-176 4683694 YP_001000211.1 CDS pbpA NC_008787.1 470053 471984 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1A 470053..471984 Campylobacter jejuni subsp. jejuni 81-176 4683133 YP_001000212.1 CDS clpB NC_008787.1 472012 474585 R identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; ATP-dependent chaperone protein ClpB complement(472012..474585) Campylobacter jejuni subsp. jejuni 81-176 4683502 YP_001000213.1 CDS CJJ81176_0538 NC_008787.1 474697 474987 R identified by match to protein family HMM PF02583; hypothetical protein complement(474697..474987) Campylobacter jejuni subsp. jejuni 81-176 4683379 YP_001000214.1 CDS ctpA NC_008787.1 475105 476439 D identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease 475105..476439 Campylobacter jejuni subsp. jejuni 81-176 4683664 YP_001000215.1 CDS purC NC_008787.1 476441 477151 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 476441..477151 Campylobacter jejuni subsp. jejuni 81-176 4683410 YP_001000216.1 CDS purS NC_008787.1 477160 477405 D identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302; phosphoribosylformylglycinamidine synthase, purS protein 477160..477405 Campylobacter jejuni subsp. jejuni 81-176 4683661 YP_001000217.1 CDS purQ NC_008787.1 477407 478054 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 477407..478054 Campylobacter jejuni subsp. jejuni 81-176 4682267 YP_001000218.1 CDS CJJ81176_0543 NC_008787.1 478138 479247 D hypothetical protein 478138..479247 Campylobacter jejuni subsp. jejuni 81-176 4683447 YP_001000219.1 CDS CJJ81176_0544 NC_008787.1 479228 479920 D identified by match to protein family HMM PF01553; 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative 479228..479920 Campylobacter jejuni subsp. jejuni 81-176 4683262 YP_001000220.1 CDS CJJ81176_0545 NC_008787.1 479914 480282 D identified by match to protein family HMM PF02537; match to protein family HMM TIGR00494; crcB protein 479914..480282 Campylobacter jejuni subsp. jejuni 81-176 4682437 YP_001000221.1 CDS htpG NC_008787.1 480354 482180 D molecular chaperone; heat shock protein 90 480354..482180 Campylobacter jejuni subsp. jejuni 81-176 4683534 YP_001000222.1 CDS CJJ81176_0547 NC_008787.1 482177 482494 D hypothetical protein 482177..482494 Campylobacter jejuni subsp. jejuni 81-176 4682402 YP_001000223.1 CDS CJJ81176_0548 NC_008787.1 482494 482928 D hypothetical protein 482494..482928 Campylobacter jejuni subsp. jejuni 81-176 4683238 YP_001000224.1 CDS CJJ81176_0549 NC_008787.1 482932 484701 D identified by match to protein family HMM PF02690; Na/Pi-cotransporter, putative 482932..484701 Campylobacter jejuni subsp. jejuni 81-176 4682696 YP_001000225.1 CDS CJJ81176_0550 NC_008787.1 484698 486506 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein complement(484698..486506) Campylobacter jejuni subsp. jejuni 81-176 4683672 YP_001000226.1 CDS fliE NC_008787.1 486513 486809 R forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE complement(486513..486809) Campylobacter jejuni subsp. jejuni 81-176 4682993 YP_001000227.1 CDS flgC NC_008787.1 486816 487310 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(486816..487310) Campylobacter jejuni subsp. jejuni 81-176 4682789 YP_001000228.1 CDS flgB NC_008787.1 487320 487751 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB complement(487320..487751) Campylobacter jejuni subsp. jejuni 81-176 4683619 YP_001000229.1 CDS CJJ81176_0554 NC_008787.1 487831 488919 R identified by match to protein family HMM PF02618; hypothetical protein complement(487831..488919) Campylobacter jejuni subsp. jejuni 81-176 4682986 YP_001000230.1 CDS CJJ81176_0555 NC_008787.1 488786 491317 D hypothetical protein 488786..491317 Campylobacter jejuni subsp. jejuni 81-176 4682931 YP_001000231.1 CDS icd NC_008787.1 491335 493638 D identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; isocitrate dehydrogenase, NADP-dependent 491335..493638 Campylobacter jejuni subsp. jejuni 81-176 4682637 YP_001000232.1 CDS mdh NC_008787.1 493635 494537 D identified by match to protein family HMM PF00056; match to protein family HMM PF02866; malate dehydrogenase 493635..494537 Campylobacter jejuni subsp. jejuni 81-176 4683126 YP_001000233.1 CDS sucC NC_008787.1 494538 495701 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 494538..495701 Campylobacter jejuni subsp. jejuni 81-176 4682667 YP_001000234.1 CDS sucD NC_008787.1 495711 496580 D identified by match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019; succinyl-CoA synthase, alpha subunit 495711..496580 Campylobacter jejuni subsp. jejuni 81-176 4682288 YP_001000235.1 CDS oorD NC_008787.1 496594 496905 D identified by match to protein family HMM PF00037; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 496594..496905 Campylobacter jejuni subsp. jejuni 81-176 4682808 YP_001000236.1 CDS oorA NC_008787.1 496914 498038 D identified by match to protein family HMM PF01855; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 496914..498038 Campylobacter jejuni subsp. jejuni 81-176 4682318 YP_001000237.1 CDS oorB NC_008787.1 498040 498885 D identified by match to protein family HMM PF02775; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 498040..498885 Campylobacter jejuni subsp. jejuni 81-176 4683500 YP_001000238.1 CDS oorC NC_008787.1 498882 499439 D identified by match to protein family HMM PF01558; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 498882..499439 Campylobacter jejuni subsp. jejuni 81-176 4682505 YP_001000239.1 CDS CJJ81176_0564 NC_008787.1 499578 499841 D hypothetical protein 499578..499841 Campylobacter jejuni subsp. jejuni 81-176 4683247 YP_001000240.1 CDS CJJ81176_0565 NC_008787.1 499844 500380 D hypothetical protein 499844..500380 Campylobacter jejuni subsp. jejuni 81-176 4682914 YP_001000241.1 CDS CJJ81176_0566 NC_008787.1 500394 501287 D identified by match to protein family HMM PF00348; polyprenyl synthetase family protein 500394..501287 Campylobacter jejuni subsp. jejuni 81-176 4682738 YP_001000242.1 CDS hemA NC_008787.1 501287 502585 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 501287..502585 Campylobacter jejuni subsp. jejuni 81-176 4682644 YP_001000243.1 CDS proS NC_008787.1 502569 504278 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 502569..504278 Campylobacter jejuni subsp. jejuni 81-176 4683643 YP_001000244.1 CDS CJJ81176_0569 NC_008787.1 504275 504664 D hypothetical protein 504275..504664 Campylobacter jejuni subsp. jejuni 81-176 4682250 YP_001000245.1 CDS hemC NC_008787.1 504661 505584 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 504661..505584 Campylobacter jejuni subsp. jejuni 81-176 4682881 YP_001000246.1 CDS CJJ81176_0571 NC_008787.1 505581 507383 D identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative 505581..507383 Campylobacter jejuni subsp. jejuni 81-176 4683634 YP_001000247.1 CDS flaG NC_008787.1 507540 507905 D possibly involved in flagella export; flagellar protein FlaG 507540..507905 Campylobacter jejuni subsp. jejuni 81-176 4683530 YP_001000248.1 CDS fliD NC_008787.1 507908 509836 D Also called hook-associated protein 2; involved in flagellin assembly; flagellar capping protein 507908..509836 Campylobacter jejuni subsp. jejuni 81-176 4683762 YP_001000249.1 CDS fliS NC_008787.1 509848 510234 D flagellin specific chaperone; flagellar protein FliS 509848..510234 Campylobacter jejuni subsp. jejuni 81-176 4682466 YP_001000250.1 CDS CJJ81176_0575 NC_008787.1 510299 510490 D hypothetical protein 510299..510490 Campylobacter jejuni subsp. jejuni 81-176 4683401 YP_001000251.1 CDS efp NC_008787.1 510922 511491 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 510922..511491 Campylobacter jejuni subsp. jejuni 81-176 4682138 YP_001000252.1 CDS CJJ81176_0577 NC_008787.1 511650 512342 D identified by match to protein family HMM PF06149; hypothetical protein 511650..512342 Campylobacter jejuni subsp. jejuni 81-176 4683763 YP_001000253.1 CDS CJJ81176_0578 NC_008787.1 512329 513282 D identified by match to protein family HMM PF06166; hypothetical protein 512329..513282 Campylobacter jejuni subsp. jejuni 81-176 4682816 YP_001000254.1 CDS CJJ81176_0579 NC_008787.1 513292 514296 D hypothetical protein 513292..514296 Campylobacter jejuni subsp. jejuni 81-176 4682172 YP_001000255.1 CDS CJJ81176_0580 NC_008787.1 514411 515697 D identified by match to protein family HMM PF03600; match to protein family HMM PF07158; hypothetical protein 514411..515697 Campylobacter jejuni subsp. jejuni 81-176 4683114 YP_001000256.1 CDS CJJ81176_0581 NC_008787.1 515708 516505 D identified by match to protein family HMM PF04909; hypothetical protein 515708..516505 Campylobacter jejuni subsp. jejuni 81-176 4683785 YP_001000257.1 CDS CJJ81176_0582 NC_008787.1 516502 517587 R hypothetical protein complement(516502..517587) Campylobacter jejuni subsp. jejuni 81-176 4682913 YP_001000258.1 CDS proA NC_008787.1 517584 518816 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(517584..518816) Campylobacter jejuni subsp. jejuni 81-176 4682276 YP_001000259.1 CDS CJJ81176_0584 NC_008787.1 518887 519822 D identified by match to protein family HMM PF00070; match to protein family HMM PF03486; match to protein family HMM PF07992; pyridine nucleotide-disulphide oxidoreductase family protein 518887..519822 Campylobacter jejuni subsp. jejuni 81-176 4682613 YP_001000260.1 CDS CJJ81176_0585 NC_008787.1 520003 521331 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein, authentic frameshift 520003..521331 Campylobacter jejuni subsp. jejuni 81-176 4682423 YP_001000261.1 CDS CJJ81176_0586 NC_008787.1 521379 522308 R hypothetical protein complement(521379..522308) Campylobacter jejuni subsp. jejuni 81-176 4682256 YP_001000262.1 CDS dnaB NC_008787.1 522462 523838 D unwinds double stranded DNA; replicative DNA helicase 522462..523838 Campylobacter jejuni subsp. jejuni 81-176 4682615 YP_001000263.1 CDS CJJ81176_0588 NC_008787.1 523943 524503 D hypothetical protein 523943..524503 Campylobacter jejuni subsp. jejuni 81-176 4683419 YP_001000264.1 CDS CJJ81176_0589 NC_008787.1 524494 524700 D hypothetical protein 524494..524700 Campylobacter jejuni subsp. jejuni 81-176 4682299 YP_001000265.1 CDS CJJ81176_0590 NC_008787.1 524842 525519 D hypothetical protein 524842..525519 Campylobacter jejuni subsp. jejuni 81-176 4683128 YP_001000266.1 CDS CJJ81176_0591 NC_008787.1 525591 526457 D hypothetical protein 525591..526457 Campylobacter jejuni subsp. jejuni 81-176 4682305 YP_001000267.1 CDS CJJ81176_0592 NC_008787.1 526457 527239 D hypothetical protein 526457..527239 Campylobacter jejuni subsp. jejuni 81-176 4683704 YP_001000268.1 CDS CJJ81176_0593 NC_008787.1 527243 527707 D hypothetical protein 527243..527707 Campylobacter jejuni subsp. jejuni 81-176 4682780 YP_001000269.1 CDS CJJ81176_0594 NC_008787.1 527714 528019 D hypothetical protein 527714..528019 Campylobacter jejuni subsp. jejuni 81-176 4683416 YP_001000270.1 CDS CJJ81176_0595 NC_008787.1 528028 528237 D putative ATP 528028..528237 Campylobacter jejuni subsp. jejuni 81-176 4683579 YP_001000271.1 CDS CJJ81176_0596 NC_008787.1 528194 529096 D hypothetical protein 528194..529096 Campylobacter jejuni subsp. jejuni 81-176 4683296 YP_001000272.1 CDS CJJ81176_0597 NC_008787.1 529241 529963 D transcriptional regulator, putative 529241..529963 Campylobacter jejuni subsp. jejuni 81-176 4683615 YP_001000273.1 CDS ribB NC_008787.1 530214 531281 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 530214..531281 Campylobacter jejuni subsp. jejuni 81-176 4682382 YP_001000274.1 CDS CJJ81176_0601 NC_008787.1 531293 531736 D identified by match to protein family HMM PF02637; GatB/Yqey family protein 531293..531736 Campylobacter jejuni subsp. jejuni 81-176 4683675 YP_001000275.1 CDS ilvB NC_008787.1 531754 533454 D catalyzes the formation of 2-acetolactate from pyruvate, leucine resistant; also known as acetolactate synthase 3 large subunit; acetolactate synthase 3 catalytic subunit 531754..533454 Campylobacter jejuni subsp. jejuni 81-176 4683032 YP_001000276.1 CDS ilvH NC_008787.1 533451 533915 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 533451..533915 Campylobacter jejuni subsp. jejuni 81-176 4683684 YP_001000277.1 CDS lpxD NC_008787.1 533912 534877 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 533912..534877 Campylobacter jejuni subsp. jejuni 81-176 4682735 YP_001000278.1 CDS queA NC_008787.1 534866 535894 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(534866..535894) Campylobacter jejuni subsp. jejuni 81-176 4682607 YP_001000279.1 CDS tatC NC_008787.1 535887 536624 R identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; Sec-independent protein translocase TatC complement(535887..536624) Campylobacter jejuni subsp. jejuni 81-176 4683509 YP_001000280.1 CDS tatB NC_008787.1 536625 537032 R mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase complement(536625..537032) Campylobacter jejuni subsp. jejuni 81-176 4683387 YP_001000281.1 CDS CJJ81176_0608 NC_008787.1 537091 538158 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(537091..538158) Campylobacter jejuni subsp. jejuni 81-176 4683258 YP_001000282.1 CDS nidH NC_008787.1 538259 538729 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 538259..538729 Campylobacter jejuni subsp. jejuni 81-176 4682523 YP_001000283.1 CDS CJJ81176_0610 NC_008787.1 538731 539933 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 538731..539933 Campylobacter jejuni subsp. jejuni 81-176 4682249 YP_001000284.1 CDS CJJ81176_0611 NC_008787.1 539934 540470 D hypothetical protein 539934..540470 Campylobacter jejuni subsp. jejuni 81-176 4683695 YP_001000285.1 CDS CJJ81176_0612 NC_008787.1 540476 541075 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 540476..541075 Campylobacter jejuni subsp. jejuni 81-176 4682684 YP_001000286.1 CDS folP NC_008787.1 541077 542219 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 541077..542219 Campylobacter jejuni subsp. jejuni 81-176 4682877 YP_001000287.1 CDS ligA NC_008787.1 542220 544163 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 542220..544163 Campylobacter jejuni subsp. jejuni 81-176 4683233 YP_001000288.1 CDS CJJ81176_0615 NC_008787.1 544201 545148 D hypothetical protein 544201..545148 Campylobacter jejuni subsp. jejuni 81-176 4682630 YP_001000289.1 CDS tlyA NC_008787.1 545145 545906 D identified by match to protein family HMM PF01479; match to protein family HMM PF01728; hemolysin A 545145..545906 Campylobacter jejuni subsp. jejuni 81-176 4682406 YP_001000290.1 CDS CJJ81176_0617 NC_008787.1 545872 546726 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 545872..546726 Campylobacter jejuni subsp. jejuni 81-176 4683522 YP_001000291.1 CDS CJJ81176_0618 NC_008787.1 546716 547423 D identified by match to protein family HMM TIGR00740; methyltransferase, putative 546716..547423 Campylobacter jejuni subsp. jejuni 81-176 4683063 YP_001000292.1 CDS CJJ81176_0619 NC_008787.1 547413 547628 R putative lipoprotein complement(547413..547628) Campylobacter jejuni subsp. jejuni 81-176 4683117 YP_001000293.1 CDS CJJ81176_0620 NC_008787.1 547625 548065 R hypothetical protein complement(547625..548065) Campylobacter jejuni subsp. jejuni 81-176 4682194 YP_001000294.1 CDS CJJ81176_0621 NC_008787.1 548123 548755 R identified by match to protein family HMM PF03458; hypothetical protein complement(548123..548755) Campylobacter jejuni subsp. jejuni 81-176 4682233 YP_001000295.1 CDS CJJ81176_0622 NC_008787.1 548766 549416 R identified by match to protein family HMM PF01223; DNA/RNA non-specific endonuclease complement(548766..549416) Campylobacter jejuni subsp. jejuni 81-176 4683780 YP_001000296.1 CDS nth NC_008787.1 549413 550039 R identified by match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III complement(549413..550039) Campylobacter jejuni subsp. jejuni 81-176 4682112 YP_001000297.1 CDS CJJ81176_0624 NC_008787.1 550120 550941 D identified by match to protein family HMM PF00639; major antigenic peptide PEB4 550120..550941 Campylobacter jejuni subsp. jejuni 81-176 4682557 YP_001000298.1 CDS fbaA NC_008787.1 550941 552005 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 550941..552005 Campylobacter jejuni subsp. jejuni 81-176 4683407 YP_001000299.1 CDS CJJ81176_0626 NC_008787.1 552100 553542 D hypothetical protein 552100..553542 Campylobacter jejuni subsp. jejuni 81-176 4682753 YP_001000300.1 CDS CJJ81176_0627 NC_008787.1 553539 554492 D identified by match to protein family HMM PF00691; chemotaxis protein MotB, putative 553539..554492 Campylobacter jejuni subsp. jejuni 81-176 4683212 YP_001000301.1 CDS CJJ81176_0628 NC_008787.1 554479 555354 D hypothetical protein 554479..555354 Campylobacter jejuni subsp. jejuni 81-176 4683772 YP_001000302.1 CDS CJJ81176_0629 NC_008787.1 555346 556689 R identified by match to protein family HMM PF00209; sodium-dependent transporter, putative complement(555346..556689) Campylobacter jejuni subsp. jejuni 81-176 4683149 YP_001000303.1 CDS CJJ81176_0630 NC_008787.1 556740 557408 R identified by match to protein family HMM PF03473; match to protein family HMM PF03475; MOSC domain-containing protein complement(556740..557408) Campylobacter jejuni subsp. jejuni 81-176 4682387 YP_001000304.1 CDS dsbD NC_008787.1 557405 559108 R identified by match to protein family HMM PF00085; match to protein family HMM PF02683; thiol:disulfide interchange protein DsbD complement(557405..559108) Campylobacter jejuni subsp. jejuni 81-176 4682399 YP_001000305.1 CDS CJJ81176_0632 NC_008787.1 559203 559691 D identified by match to protein family HMM PF03976; hypothetical protein 559203..559691 Campylobacter jejuni subsp. jejuni 81-176 4682925 YP_001000306.1 CDS CJJ81176_0633 NC_008787.1 559672 560085 D identified by match to protein family HMM PF03976; polyphosphate kinase 2 559672..560085 Campylobacter jejuni subsp. jejuni 81-176 4682209 YP_001000307.1 CDS CJJ81176_0634 NC_008787.1 560094 561284 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; carboxypeptidase 560094..561284 Campylobacter jejuni subsp. jejuni 81-176 4683742 YP_001000308.1 CDS CJJ81176_0635 NC_008787.1 561363 562535 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; macrolide-specific efflux protein macA 561363..562535 Campylobacter jejuni subsp. jejuni 81-176 4682833 YP_001000309.1 CDS CJJ81176_0636 NC_008787.1 562535 564460 D identified by match to protein family HMM PF00005; match to protein family HMM PF02687; macrolide-specific efflux protein macB 562535..564460 Campylobacter jejuni subsp. jejuni 81-176 4683614 YP_001000310.1 CDS CJJ81176_0637 NC_008787.1 564462 565832 D identified by match to protein family HMM PF02321; outer membrane efflux protein 564462..565832 Campylobacter jejuni subsp. jejuni 81-176 4682755 YP_001000311.1 CDS CJJ81176_0638 NC_008787.1 565834 567012 R hypothetical protein complement(565834..567012) Campylobacter jejuni subsp. jejuni 81-176 4682625 YP_001000312.1 CDS CJJ81176_0639 NC_008787.1 566999 568009 R identified by match to protein family HMM PF04311; hypothetical protein complement(566999..568009) Campylobacter jejuni subsp. jejuni 81-176 4683141 YP_001000313.1 CDS algI NC_008787.1 568010 569386 R identified by match to protein family HMM PF03062; alginate O-acetyltransferase AlgI complement(568010..569386) Campylobacter jejuni subsp. jejuni 81-176 4682422 YP_001000314.1 CDS ftn NC_008787.1 569429 569932 R identified by match to protein family HMM PF00210; nonheme iron-containing ferritin complement(569429..569932) Campylobacter jejuni subsp. jejuni 81-176 4683176 YP_001000315.1 CDS CJJ81176_0642 NC_008787.1 570112 571107 D phosphate ABC transporter, periplasmic phosphate-binding protein, putative 570112..571107 Campylobacter jejuni subsp. jejuni 81-176 4683609 YP_001000316.1 CDS CJJ81176_0643 NC_008787.1 571117 572031 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter, permease protein PstC, putative 571117..572031 Campylobacter jejuni subsp. jejuni 81-176 4683560 YP_001000317.1 CDS CJJ81176_0644 NC_008787.1 572028 573116 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter, permease protein PstA, putative 572028..573116 Campylobacter jejuni subsp. jejuni 81-176 4682995 YP_001000318.1 CDS pstB NC_008787.1 573113 573853 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 573113..573853 Campylobacter jejuni subsp. jejuni 81-176 4682201 YP_001000319.1 CDS CJJ81176_0646 NC_008787.1 573915 574526 D hypothetical protein 573915..574526 Campylobacter jejuni subsp. jejuni 81-176 4683031 YP_001000320.1 CDS CJJ81176_0647 NC_008787.1 574496 575143 D hypothetical protein 574496..575143 Campylobacter jejuni subsp. jejuni 81-176 4682451 YP_001000321.1 CDS CJJ81176_0648 NC_008787.1 575233 576549 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 575233..576549 Campylobacter jejuni subsp. jejuni 81-176 4683591 YP_001000322.1 CDS CJJ81176_0649 NC_008787.1 576525 577172 D identified by match to protein family HMM PF01863; hypothetical protein 576525..577172 Campylobacter jejuni subsp. jejuni 81-176 4683314 YP_001000323.1 CDS CJJ81176_0650 NC_008787.1 577214 578734 D hypothetical protein 577214..578734 Campylobacter jejuni subsp. jejuni 81-176 4683179 YP_001000324.1 CDS hypF NC_008787.1 578715 580901 D identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF 578715..580901 Campylobacter jejuni subsp. jejuni 81-176 4682680 YP_001000325.1 CDS hypB NC_008787.1 580974 581717 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase accessory protein HypB 580974..581717 Campylobacter jejuni subsp. jejuni 81-176 4683071 YP_001000326.1 CDS hypC NC_008787.1 581717 581998 D identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC/HupF 581717..581998 Campylobacter jejuni subsp. jejuni 81-176 4682728 YP_001000327.1 CDS hypD NC_008787.1 581982 583073 D identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075; hydrogenase expression/formation protein HypD 581982..583073 Campylobacter jejuni subsp. jejuni 81-176 4682714 YP_001000328.1 CDS hypE NC_008787.1 583070 584044 D identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE 583070..584044 Campylobacter jejuni subsp. jejuni 81-176 4682799 YP_001000329.1 CDS hypA NC_008787.1 584044 584388 D identified by match to protein family HMM PF01155; match to protein family HMM TIGR00100; hydrogenase nickel insertion protein HypA 584044..584388 Campylobacter jejuni subsp. jejuni 81-176 4682907 YP_001000330.1 CDS CJJ81176_0657 NC_008787.1 584630 585367 R identified by match to protein family HMM PF04313; prophage Lp2 protein 6 complement(584630..585367) Campylobacter jejuni subsp. jejuni 81-176 4682660 YP_001000331.1 CDS CJJ81176_0658 NC_008787.1 585430 586398 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(585430..586398) Campylobacter jejuni subsp. jejuni 81-176 4682219 YP_001000332.1 CDS CJJ81176_0659 NC_008787.1 586391 588325 R identified by match to protein family HMM PF00773; match to protein family HMM PF08206; RNB-like protein complement(586391..588325) Campylobacter jejuni subsp. jejuni 81-176 4682591 YP_001000333.1 CDS ilvC NC_008787.1 588444 589466 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 588444..589466 Campylobacter jejuni subsp. jejuni 81-176 4682227 YP_001000334.1 CDS CJJ81176_0661 NC_008787.1 589470 590552 D identified by match to protein family HMM PF04748; hypothetical protein 589470..590552 Campylobacter jejuni subsp. jejuni 81-176 4682107 YP_001000335.1 CDS dprA NC_008787.1 590542 591315 D identified by match to protein family HMM PF02481; DNA processing protein A 590542..591315 Campylobacter jejuni subsp. jejuni 81-176 4683205 YP_001000336.1 CDS CJJ81176_0663 NC_008787.1 591312 591695 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 591312..591695 Campylobacter jejuni subsp. jejuni 81-176 4682279 YP_001000337.1 CDS CJJ81176_0664 NC_008787.1 591724 592563 D identified by match to protein family HMM PF01189; NOL1/NOP2/sun family protein 591724..592563 Campylobacter jejuni subsp. jejuni 81-176 4682397 YP_001000338.1 CDS msrA NC_008787.1 592739 593236 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(592739..593236) Campylobacter jejuni subsp. jejuni 81-176 4683242 YP_001000339.1 CDS ppa NC_008787.1 593277 593795 R identified by match to protein family HMM PF00719; inorganic pyrophosphatase complement(593277..593795) Campylobacter jejuni subsp. jejuni 81-176 4683594 YP_001000340.1 CDS adk NC_008787.1 593805 594383 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(593805..594383) Campylobacter jejuni subsp. jejuni 81-176 4682292 YP_001000341.1 CDS aspS NC_008787.1 594380 596131 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(594380..596131) Campylobacter jejuni subsp. jejuni 81-176 4683139 YP_001000342.1 CDS pnk NC_008787.1 596222 597082 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 596222..597082 Campylobacter jejuni subsp. jejuni 81-176 4682669 YP_001000343.1 CDS recN NC_008787.1 597082 598605 D identified by match to protein family HMM PF02463; DNA repair protein RecN 597082..598605 Campylobacter jejuni subsp. jejuni 81-176 4682167 YP_001000344.1 CDS CJJ81176_0671 NC_008787.1 598708 599952 D identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254; response regulator/GGDEF domain-containing protein 598708..599952 Campylobacter jejuni subsp. jejuni 81-176 4683204 YP_001000345.1 CDS CJJ81176_0672 NC_008787.1 599943 600758 D identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 599943..600758 Campylobacter jejuni subsp. jejuni 81-176 4682371 YP_001000346.1 CDS CJJ81176_0673 NC_008787.1 600758 601876 D identified by match to protein family HMM PF01464; match to protein family HMM PF01476; membrane-bound lytic murein transglycosylase D, putative 600758..601876 Campylobacter jejuni subsp. jejuni 81-176 4682722 YP_001000347.1 CDS rlpA NC_008787.1 601863 602663 D identified by match to protein family HMM PF03330; match to protein family HMM PF05036; match to protein family HMM TIGR00413; rare lipoprotein A 601863..602663 Campylobacter jejuni subsp. jejuni 81-176 4682353 YP_001000348.1 CDS CJJ81176_0675 NC_008787.1 602669 603157 D identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; YrbI family phosphatase 602669..603157 Campylobacter jejuni subsp. jejuni 81-176 4682729 YP_001000349.1 CDS CJJ81176_0676 NC_008787.1 603211 603663 D identified by match to protein family HMM PF06835; hypothetical protein 603211..603663 Campylobacter jejuni subsp. jejuni 81-176 4682608 YP_001000350.1 CDS CJJ81176_0677 NC_008787.1 603645 604106 D identified by match to protein family HMM PF03968; OstA family protein 603645..604106 Campylobacter jejuni subsp. jejuni 81-176 4682951 YP_001000351.1 CDS engB NC_008787.1 604103 604699 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 604103..604699 Campylobacter jejuni subsp. jejuni 81-176 4682864 YP_001000352.1 CDS CJJ81176_0679 NC_008787.1 604696 605190 D hypothetical protein 604696..605190 Campylobacter jejuni subsp. jejuni 81-176 4683526 YP_001000353.1 CDS pbpC NC_008787.1 605191 606996 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 2 605191..606996 Campylobacter jejuni subsp. jejuni 81-176 4683546 YP_001000354.1 CDS CJJ81176_0681 NC_008787.1 607117 608907 R identified by match to protein family HMM PF00557; M24 family peptidase complement(607117..608907) Campylobacter jejuni subsp. jejuni 81-176 4683369 YP_001000355.1 CDS CJJ81176_0682 NC_008787.1 608923 610005 R identified by match to protein family HMM PF00854; di-/tripeptide transporter complement(608923..610005) Campylobacter jejuni subsp. jejuni 81-176 4683210 YP_001000356.1 CDS CJJ81176_0683 NC_008787.1 609978 610475 R di-/tripeptide transporter complement(609978..610475) Campylobacter jejuni subsp. jejuni 81-176 4682426 YP_001000357.1 CDS CJJ81176_0684 NC_008787.1 610646 610891 R di-/tripeptide transporter complement(610646..610891) Campylobacter jejuni subsp. jejuni 81-176 4682360 YP_001000358.1 CDS CJJ81176_0685 NC_008787.1 611119 612174 R di-/tripeptide transporter complement(611119..612174) Campylobacter jejuni subsp. jejuni 81-176 4682953 YP_001000359.1 CDS CJJ81176_0686 NC_008787.1 612301 612849 R hypothetical protein complement(612301..612849) Campylobacter jejuni subsp. jejuni 81-176 4682320 YP_001000360.1 CDS CJJ81176_0687 NC_008787.1 612842 613897 R hypothetical protein complement(612842..613897) Campylobacter jejuni subsp. jejuni 81-176 4682099 YP_001000361.1 CDS era NC_008787.1 613935 614810 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(613935..614810) Campylobacter jejuni subsp. jejuni 81-176 4682171 YP_001000362.1 CDS hslU NC_008787.1 614807 616126 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(614807..616126) Campylobacter jejuni subsp. jejuni 81-176 4683122 YP_001000363.1 CDS hslV NC_008787.1 616123 616665 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(616123..616665) Campylobacter jejuni subsp. jejuni 81-176 4683698 YP_001000364.1 CDS rplI NC_008787.1 616665 617108 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(616665..617108) Campylobacter jejuni subsp. jejuni 81-176 4682826 YP_001000365.1 CDS argG NC_008787.1 617121 618341 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(617121..618341) Campylobacter jejuni subsp. jejuni 81-176 4682191 YP_001000366.1 CDS CJJ81176_0693 NC_008787.1 618496 618741 D identified by match to protein family HMM PF01479; S4 domain-containing protein 618496..618741 Campylobacter jejuni subsp. jejuni 81-176 4682131 YP_001000367.1 CDS CJJ81176_0694 NC_008787.1 618738 619145 D identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 618738..619145 Campylobacter jejuni subsp. jejuni 81-176 4682298 YP_001000368.1 CDS CJJ81176_0695 NC_008787.1 619129 619866 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 619129..619866 Campylobacter jejuni subsp. jejuni 81-176 4682785 YP_001000369.1 CDS rpoN NC_008787.1 619866 621116 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 619866..621116 Campylobacter jejuni subsp. jejuni 81-176 4683602 YP_001000370.1 CDS dcuB NC_008787.1 621280 622704 D functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 621280..622704 Campylobacter jejuni subsp. jejuni 81-176 4682583 YP_001000371.1 CDS CJJ81176_0698 NC_008787.1 622846 622959 D hypothetical protein 622846..622959 Campylobacter jejuni subsp. jejuni 81-176 4683512 YP_001000372.1 CDS CJJ81176_0699 NC_008787.1 623043 624734 D identified by match to protein family HMM PF03814; match to protein family HMM TIGR00680; potassium-transporting ATPase, A subunit, degenerate 623043..624734 Campylobacter jejuni subsp. jejuni 81-176 4682294 YP_001000373.1 CDS CJJ81176_0700 NC_008787.1 624744 626789 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 624744..626789 Campylobacter jejuni subsp. jejuni 81-176 4682933 YP_001000374.1 CDS CJJ81176_0701 NC_008787.1 626791 627399 D identified by match to protein family HMM PF02669; potassium-transporting ATPase, C subunit, putative 626791..627399 Campylobacter jejuni subsp. jejuni 81-176 4683498 YP_001000375.1 CDS CJJ81176_0702 NC_008787.1 627402 629330 D identified by match to protein family HMM PF02702; truncated KdpD protein 627402..629330 Campylobacter jejuni subsp. jejuni 81-176 4682733 YP_001000376.1 CDS uvrB NC_008787.1 629325 631298 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(629325..631298) Campylobacter jejuni subsp. jejuni 81-176 4683514 YP_001000377.1 CDS CJJ81176_0704 NC_008787.1 631452 631682 D hypothetical protein 631452..631682 Campylobacter jejuni subsp. jejuni 81-176 4683611 YP_001000378.1 CDS CJJ81176_0705 NC_008787.1 631672 631914 D hypothetical protein 631672..631914 Campylobacter jejuni subsp. jejuni 81-176 4682657 YP_001000379.1 CDS CJJ81176_0706 NC_008787.1 631911 632348 D hypothetical protein 631911..632348 Campylobacter jejuni subsp. jejuni 81-176 4683166 YP_001000380.1 CDS priA NC_008787.1 632330 634183 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 632330..634183 Campylobacter jejuni subsp. jejuni 81-176 4682301 YP_001000381.1 CDS CJJ81176_0708 NC_008787.1 634193 635587 R invasion phenotype protein complement(634193..635587) Campylobacter jejuni subsp. jejuni 81-176 4683080 YP_001000382.1 CDS ispG NC_008787.1 635733 636806 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 635733..636806 Campylobacter jejuni subsp. jejuni 81-176 4682458 YP_001000383.1 CDS flgH NC_008787.1 636836 637534 R part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein complement(636836..637534) Campylobacter jejuni subsp. jejuni 81-176 4683341 YP_001000384.1 CDS pta NC_008787.1 637594 639129 D identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651; phosphate acetyltransferase 637594..639129 Campylobacter jejuni subsp. jejuni 81-176 4683539 YP_001000385.1 CDS ackA NC_008787.1 639143 640333 D AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 639143..640333 Campylobacter jejuni subsp. jejuni 81-176 4682442 YP_001000386.1 CDS CJJ81176_0713 NC_008787.1 640361 644113 R identified by match to protein family HMM PF04313; hypothetical protein complement(640361..644113) Campylobacter jejuni subsp. jejuni 81-176 4682404 YP_001000387.1 CDS CJJ81176_0714 NC_008787.1 644263 644754 D hypothetical protein 644263..644754 Campylobacter jejuni subsp. jejuni 81-176 4683317 YP_001000388.1 CDS CJJ81176_0715 NC_008787.1 644742 645680 R hypothetical protein complement(644742..645680) Campylobacter jejuni subsp. jejuni 81-176 4682991 YP_001000389.1 CDS mraW NC_008787.1 645680 646612 R identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW complement(645680..646612) Campylobacter jejuni subsp. jejuni 81-176 4683346 YP_001000390.1 CDS CJJ81176_0717 NC_008787.1 646777 648267 D peptidyl-prolyl cis-trans isomerase D,-like protein 646777..648267 Campylobacter jejuni subsp. jejuni 81-176 4683200 YP_001000391.1 CDS ftsA NC_008787.1 648270 649652 D identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 648270..649652 Campylobacter jejuni subsp. jejuni 81-176 4682715 YP_001000392.1 CDS ftsZ NC_008787.1 649668 650780 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 649668..650780 Campylobacter jejuni subsp. jejuni 81-176 4683173 YP_001000393.1 CDS CJJ81176_0720 NC_008787.1 650936 651748 D identified by match to protein family HMM PF00460; match to protein family HMM PF06429; flagellar basal-body rod protein 650936..651748 Campylobacter jejuni subsp. jejuni 81-176 4683767 YP_001000394.1 CDS flgG NC_008787.1 651777 652568 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 651777..652568 Campylobacter jejuni subsp. jejuni 81-176 4683393 YP_001000395.1 CDS glnA NC_008787.1 652635 654065 R identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I complement(652635..654065) Campylobacter jejuni subsp. jejuni 81-176 4682529 YP_001000396.1 CDS CJJ81176_0723 NC_008787.1 654268 654963 D hypothetical protein 654268..654963 Campylobacter jejuni subsp. jejuni 81-176 4682384 YP_001000397.1 CDS CJJ81176_0724 NC_008787.1 654960 656213 D identified by match to protein family HMM PF01136; U32 family peptidase 654960..656213 Campylobacter jejuni subsp. jejuni 81-176 4682703 YP_001000398.1 CDS purE NC_008787.1 656214 656708 D identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 656214..656708 Campylobacter jejuni subsp. jejuni 81-176 4683044 YP_001000399.1 CDS CJJ81176_0726 NC_008787.1 656718 657254 D hypothetical protein 656718..657254 Campylobacter jejuni subsp. jejuni 81-176 4682081 YP_001000400.1 CDS glyQ NC_008787.1 657266 658129 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 657266..658129 Campylobacter jejuni subsp. jejuni 81-176 4683169 YP_001000401.1 CDS CJJ81176_0728 NC_008787.1 658116 658841 D identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein 658116..658841 Campylobacter jejuni subsp. jejuni 81-176 4682217 YP_001000402.1 CDS CJJ81176_0729 NC_008787.1 658851 659567 D identified by match to protein family HMM PF02591; hypothetical protein 658851..659567 Campylobacter jejuni subsp. jejuni 81-176 4683109 YP_001000403.1 CDS waaA NC_008787.1 659564 660721 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 659564..660721 Campylobacter jejuni subsp. jejuni 81-176 4682739 YP_001000404.1 CDS CJJ81176_0731 NC_008787.1 660702 661454 D identified by match to protein family HMM PF00849; RNA pseudouridine synthase family protein 660702..661454 Campylobacter jejuni subsp. jejuni 81-176 4682965 YP_001000405.1 CDS ffh NC_008787.1 661522 662859 D identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 661522..662859 Campylobacter jejuni subsp. jejuni 81-176 4682375 YP_001000406.1 CDS rpsP NC_008787.1 662924 663151 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 662924..663151 Campylobacter jejuni subsp. jejuni 81-176 4683147 YP_001000407.1 CDS CJJ81176_0734 NC_008787.1 663154 663396 D hypothetical protein 663154..663396 Campylobacter jejuni subsp. jejuni 81-176 4682632 YP_001000408.1 CDS rimM NC_008787.1 663389 663928 D identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 663389..663928 Campylobacter jejuni subsp. jejuni 81-176 4682772 YP_001000409.1 CDS trmD NC_008787.1 663925 664629 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 663925..664629 Campylobacter jejuni subsp. jejuni 81-176 4682347 YP_001000410.1 CDS rplS NC_008787.1 664640 664996 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 664640..664996 Campylobacter jejuni subsp. jejuni 81-176 4682519 YP_001000411.1 CDS CJJ81176_0738 NC_008787.1 665129 665542 D identified by match to protein family HMM PF00576; match to protein family HMM TIGR02962; transthyretin-like protein 665129..665542 Campylobacter jejuni subsp. jejuni 81-176 4682231 YP_001000412.1 CDS CJJ81176_0739 NC_008787.1 665566 666906 D identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358; 3-deoxy-7-phosphoheptulonate synthase 665566..666906 Campylobacter jejuni subsp. jejuni 81-176 4682085 YP_001000413.1 CDS CJJ81176_0740 NC_008787.1 666903 667232 D identified by match to protein family HMM PF03960; hypothetical protein 666903..667232 Campylobacter jejuni subsp. jejuni 81-176 4682488 YP_001000414.1 CDS dnaE NC_008787.1 667680 671282 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 667680..671282 Campylobacter jejuni subsp. jejuni 81-176 4682253 YP_001000415.1 CDS CJJ81176_0742 NC_008787.1 671295 671927 R identified by match to protein family HMM TIGR00044; hypothetical protein complement(671295..671927) Campylobacter jejuni subsp. jejuni 81-176 4682773 YP_001000416.1 CDS flaC NC_008787.1 671963 672712 R identified by match to protein family HMM PF00669; flagellin subunit protein FlaC complement(671963..672712) Campylobacter jejuni subsp. jejuni 81-176 4682885 YP_001000417.1 CDS CJJ81176_0744 NC_008787.1 672751 673221 R hypothetical protein complement(672751..673221) Campylobacter jejuni subsp. jejuni 81-176 4682321 YP_001000418.1 CDS CJJ81176_0745 NC_008787.1 673234 674049 R identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; HemK family modification methylase complement(673234..674049) Campylobacter jejuni subsp. jejuni 81-176 4682682 YP_001000419.1 CDS CJJ81176_0746 NC_008787.1 674046 675233 R identified by match to protein family HMM PF01435; M48 family peptidase complement(674046..675233) Campylobacter jejuni subsp. jejuni 81-176 4682129 YP_001000420.1 CDS CJJ81176_0747 NC_008787.1 675361 675546 D hypothetical protein 675361..675546 Campylobacter jejuni subsp. jejuni 81-176 4683650 YP_001000421.1 CDS mogA NC_008787.1 675543 676085 R forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA complement(675543..676085) Campylobacter jejuni subsp. jejuni 81-176 4682264 YP_001000422.1 CDS corA NC_008787.1 676106 677089 R identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383; magnesium and cobalt transport protein CorA complement(676106..677089) Campylobacter jejuni subsp. jejuni 81-176 4683312 YP_001000423.1 CDS CJJ81176_0750 NC_008787.1 677206 678252 D ABC transporter, periplasmic substrate-binding protein 677206..678252 Campylobacter jejuni subsp. jejuni 81-176 4683170 YP_001000424.1 CDS CJJ81176_0751 NC_008787.1 678263 679588 D hypothetical protein 678263..679588 Campylobacter jejuni subsp. jejuni 81-176 4683074 YP_001000425.1 CDS CJJ81176_0752 NC_008787.1 679588 680394 D hypothetical protein 679588..680394 Campylobacter jejuni subsp. jejuni 81-176 4682691 YP_001000426.1 CDS CJJ81176_0753 NC_008787.1 680391 681230 D identified by match to protein family HMM PF00528; ABC transporter, permease protein 680391..681230 Campylobacter jejuni subsp. jejuni 81-176 4682919 YP_001000427.1 CDS CJJ81176_0754 NC_008787.1 681231 682010 D identified by match to protein family HMM PF00528; ABC transporter, permease protein 681231..682010 Campylobacter jejuni subsp. jejuni 81-176 4682317 YP_001000428.1 CDS CJJ81176_0755 NC_008787.1 682014 683003 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 682014..683003 Campylobacter jejuni subsp. jejuni 81-176 4682734 YP_001000429.1 CDS CJJ81176_0756 NC_008787.1 683000 683638 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD family hydrolase 683000..683638 Campylobacter jejuni subsp. jejuni 81-176 4682811 YP_001000430.1 CDS cjaC NC_008787.1 683662 684417 R identified by match to protein family HMM PF00497; cjaC protein complement(683662..684417) Campylobacter jejuni subsp. jejuni 81-176 4683779 YP_001000431.1 CDS CJJ81176_0758 NC_008787.1 684738 685379 D hypothetical protein 684738..685379 Campylobacter jejuni subsp. jejuni 81-176 4682280 YP_001000432.1 CDS CJJ81176_0759 NC_008787.1 685401 687329 D hypothetical protein 685401..687329 Campylobacter jejuni subsp. jejuni 81-176 4682806 YP_001000433.1 CDS CJJ81176_0760 NC_008787.1 687341 687775 D identified by match to protein family HMM PF05860; match to protein family HMM TIGR01901; hemagglutination domain-containing protein 687341..687775 Campylobacter jejuni subsp. jejuni 81-176 4683427 YP_001000434.1 CDS CJJ81176_0761 NC_008787.1 688041 689189 D hypothetical protein 688041..689189 Campylobacter jejuni subsp. jejuni 81-176 4682266 YP_001000435.1 CDS CJJ81176_0762 NC_008787.1 689255 689380 D hypothetical protein 689255..689380 Campylobacter jejuni subsp. jejuni 81-176 4683340 YP_001000436.1 CDS CJJ81176_0763 NC_008787.1 689540 690619 D hypothetical protein 689540..690619 Campylobacter jejuni subsp. jejuni 81-176 4682443 YP_001000437.1 CDS CJJ81176_0764 NC_008787.1 690715 692241 D putative outer-membrane protein 690715..692241 Campylobacter jejuni subsp. jejuni 81-176 4683195 YP_001000438.1 CDS CJJ81176_0765 NC_008787.1 692260 692403 D hypothetical protein 692260..692403 Campylobacter jejuni subsp. jejuni 81-176 4683072 YP_001000439.1 CDS CJJ81176_0770 NC_008787.1 698302 698454 R hypothetical protein complement(698302..698454) Campylobacter jejuni subsp. jejuni 81-176 4682817 YP_001000440.1 CDS CJJ81176_0772 NC_008787.1 698848 700029 D hypothetical protein 698848..700029 Campylobacter jejuni subsp. jejuni 81-176 4682236 YP_001000441.1 CDS hrcA NC_008787.1 700246 701037 D Acts as a negative regulator of the grpE-dnaK-dnaJ and groELS class I heat shock operons by preventing heat-shock induction; heat-inducible transcription repressor 700246..701037 Campylobacter jejuni subsp. jejuni 81-176 4682854 YP_001000442.1 CDS grpE NC_008787.1 701034 701564 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 701034..701564 Campylobacter jejuni subsp. jejuni 81-176 4683127 YP_001000443.1 CDS dnaK NC_008787.1 701587 703458 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 701587..703458 Campylobacter jejuni subsp. jejuni 81-176 4682428 YP_001000444.1 CDS CJJ81176_0776 NC_008787.1 703597 705507 D identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit 703597..705507 Campylobacter jejuni subsp. jejuni 81-176 4683188 YP_001000445.1 CDS CJJ81176_0777 NC_008787.1 705504 706772 D identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein 705504..706772 Campylobacter jejuni subsp. jejuni 81-176 4682478 YP_001000446.1 CDS CJJ81176_0778 NC_008787.1 706872 707465 D hypothetical protein 706872..707465 Campylobacter jejuni subsp. jejuni 81-176 4683034 YP_001000447.1 CDS CJJ81176_0779 NC_008787.1 707481 708470 D hypothetical protein 707481..708470 Campylobacter jejuni subsp. jejuni 81-176 4683050 YP_001000448.1 CDS CJJ81176_0780 NC_008787.1 708487 711402 D identified by match to protein family HMM PF04313; match to protein family HMM PF04851; type I site-specific deoxyribonuclease chain R 708487..711402 Campylobacter jejuni subsp. jejuni 81-176 4682370 YP_001000449.1 CDS CJJ81176_0781 NC_008787.1 711498 712460 D hypothetical protein 711498..712460 Campylobacter jejuni subsp. jejuni 81-176 4683068 YP_001000450.1 CDS CJJ81176_0782 NC_008787.1 712530 712871 D hypothetical protein 712530..712871 Campylobacter jejuni subsp. jejuni 81-176 4682405 YP_001000451.1 CDS aspC NC_008787.1 712921 714090 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(712921..714090) Campylobacter jejuni subsp. jejuni 81-176 4683737 YP_001000452.1 CDS cysE NC_008787.1 714262 714900 R identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine acetyltransferase complement(714262..714900) Campylobacter jejuni subsp. jejuni 81-176 4683773 YP_001000453.1 CDS speA NC_008787.1 714901 716733 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(714901..716733) Campylobacter jejuni subsp. jejuni 81-176 4682228 YP_001000454.1 CDS hisS NC_008787.1 716733 717959 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(716733..717959) Campylobacter jejuni subsp. jejuni 81-176 4682836 YP_001000455.1 CDS tmk NC_008787.1 717956 718534 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(717956..718534) Campylobacter jejuni subsp. jejuni 81-176 4682169 YP_001000456.1 CDS coaD NC_008787.1 718525 719001 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(718525..719001) Campylobacter jejuni subsp. jejuni 81-176 4683349 YP_001000457.1 CDS CJJ81176_0789 NC_008787.1 719041 719604 R catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(719041..719604) Campylobacter jejuni subsp. jejuni 81-176 4682539 YP_001000458.1 CDS flgA NC_008787.1 719601 720263 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(719601..720263) Campylobacter jejuni subsp. jejuni 81-176 4683056 YP_001000459.1 CDS CJJ81176_0791 NC_008787.1 720347 721123 R identified by match to protein family HMM PF03180; NLPA family lipoprotein complement(720347..721123) Campylobacter jejuni subsp. jejuni 81-176 4683561 YP_001000460.1 CDS CJJ81176_0792 NC_008787.1 721133 721903 R identified by match to protein family HMM PF03180; NLPA family lipoprotein complement(721133..721903) Campylobacter jejuni subsp. jejuni 81-176 4683264 YP_001000461.1 CDS CJJ81176_0793 NC_008787.1 721952 722725 R identified by match to protein family HMM PF03180; NLPA family lipoprotein complement(721952..722725) Campylobacter jejuni subsp. jejuni 81-176 4682652 YP_001000462.1 CDS CJJ81176_0794 NC_008787.1 722917 723828 R identified by match to protein family HMM PF00528; ABC transporter, permease protein complement(722917..723828) Campylobacter jejuni subsp. jejuni 81-176 4682954 YP_001000463.1 CDS CJJ81176_0795 NC_008787.1 723825 724835 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(723825..724835) Campylobacter jejuni subsp. jejuni 81-176 4682165 YP_001000464.1 CDS valS NC_008787.1 724840 727452 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(724840..727452) Campylobacter jejuni subsp. jejuni 81-176 4683192 YP_001000465.1 CDS CJJ81176_0797 NC_008787.1 727475 728494 R hypothetical protein complement(727475..728494) Campylobacter jejuni subsp. jejuni 81-176 4682213 YP_001000466.1 CDS CJJ81176_0798 NC_008787.1 728623 730653 D identified by match to protein family HMM PF00580; putative ATP-dependent DNA helicase 728623..730653 Campylobacter jejuni subsp. jejuni 81-176 4683592 YP_001000467.1 CDS CJJ81176_0799 NC_008787.1 730694 731434 D major antigenic peptide PEB2 730694..731434 Campylobacter jejuni subsp. jejuni 81-176 4682647 YP_001000468.1 CDS tpx NC_008787.1 731533 732060 D identified by match to protein family HMM PF00578; thiol peroxidase 731533..732060 Campylobacter jejuni subsp. jejuni 81-176 4682401 YP_001000469.1 CDS napA NC_008787.1 732307 735078 D periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 732307..735078 Campylobacter jejuni subsp. jejuni 81-176 4683033 YP_001000470.1 CDS napG NC_008787.1 735096 735836 D part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 735096..735836 Campylobacter jejuni subsp. jejuni 81-176 4683486 YP_001000471.1 CDS napH NC_008787.1 735836 736615 D part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 735836..736615 Campylobacter jejuni subsp. jejuni 81-176 4683021 YP_001000472.1 CDS napB NC_008787.1 736615 737136 D identified by match to protein family HMM PF03892; periplasmic nitrate reductase, small subunit 736615..737136 Campylobacter jejuni subsp. jejuni 81-176 4683422 YP_001000473.1 CDS napL NC_008787.1 737141 738055 D napL protein 737141..738055 Campylobacter jejuni subsp. jejuni 81-176 4683093 YP_001000474.1 CDS napD NC_008787.1 738048 738386 D napD protein 738048..738386 Campylobacter jejuni subsp. jejuni 81-176 4682454 YP_001000475.1 CDS CJJ81176_0807 NC_008787.1 738396 738569 D hypothetical protein 738396..738569 Campylobacter jejuni subsp. jejuni 81-176 4682413 YP_001000476.1 CDS CJJ81176_0808 NC_008787.1 738651 738896 D hypothetical protein 738651..738896 Campylobacter jejuni subsp. jejuni 81-176 4683329 YP_001000477.1 CDS CJJ81176_0809 NC_008787.1 738893 739384 D hypothetical protein 738893..739384 Campylobacter jejuni subsp. jejuni 81-176 4682573 YP_001000478.1 CDS CJJ81176_0810 NC_008787.1 739353 740471 D identified by match to protein family HMM PF01743; polyA polymerase family protein 739353..740471 Campylobacter jejuni subsp. jejuni 81-176 4683075 YP_001000479.1 CDS purU NC_008787.1 740468 741292 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 740468..741292 Campylobacter jejuni subsp. jejuni 81-176 4682150 YP_001000480.1 CDS CJJ81176_0812 NC_008787.1 741289 742557 R identified by match to protein family HMM PF00266; aminotransferase, putative complement(741289..742557) Campylobacter jejuni subsp. jejuni 81-176 4682702 YP_001000481.1 CDS CJJ81176_0813 NC_008787.1 742599 743477 D identified by match to protein family HMM PF03008; hypothetical protein 742599..743477 Campylobacter jejuni subsp. jejuni 81-176 4683142 YP_001000482.1 CDS CJJ81176_0814 NC_008787.1 743481 744500 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 743481..744500 Campylobacter jejuni subsp. jejuni 81-176 4683786 YP_001000483.1 CDS CJJ81176_0815 NC_008787.1 744619 745893 D hypothetical protein 744619..745893 Campylobacter jejuni subsp. jejuni 81-176 4683644 YP_001000484.1 CDS CJJ81176_0816 NC_008787.1 745952 747379 R Mur ligase family protein complement(745952..747379) Campylobacter jejuni subsp. jejuni 81-176 4683645 YP_001000485.1 CDS CJJ81176_0817 NC_008787.1 747380 748099 R identified by match to protein family HMM PF00561; hypothetical protein complement(747380..748099) Campylobacter jejuni subsp. jejuni 81-176 4683252 YP_001000486.1 CDS CJJ81176_0818 NC_008787.1 748101 748316 R identified by match to protein family HMM TIGR01552; prevent-host-death family protein complement(748101..748316) Campylobacter jejuni subsp. jejuni 81-176 4682357 YP_001000487.1 CDS ddl NC_008787.1 748376 749416 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(748376..749416) Campylobacter jejuni subsp. jejuni 81-176 4683299 YP_001000488.1 CDS ruvA NC_008787.1 749426 749977 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(749426..749977) Campylobacter jejuni subsp. jejuni 81-176 4682465 YP_001000489.1 CDS CJJ81176_0821 NC_008787.1 749953 751812 R hypothetical protein complement(749953..751812) Campylobacter jejuni subsp. jejuni 81-176 4683018 YP_001000490.1 CDS mviN NC_008787.1 751916 753367 D identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN 751916..753367 Campylobacter jejuni subsp. jejuni 81-176 4682845 YP_001000491.1 CDS cysS NC_008787.1 753367 754755 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 753367..754755 Campylobacter jejuni subsp. jejuni 81-176 4683125 YP_001000492.1 CDS CJJ81176_0824 NC_008787.1 754748 756490 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter, ATP-binding protein/permease MsbA, putative 754748..756490 Campylobacter jejuni subsp. jejuni 81-176 4682362 YP_001000493.1 CDS pyrD NC_008787.1 756522 757580 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 756522..757580 Campylobacter jejuni subsp. jejuni 81-176 4682973 YP_001000494.1 CDS CJJ81176_0826 NC_008787.1 757577 758827 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 757577..758827 Campylobacter jejuni subsp. jejuni 81-176 4682400 YP_001000495.1 CDS dapA NC_008787.1 758820 759716 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 758820..759716 Campylobacter jejuni subsp. jejuni 81-176 4682963 YP_001000496.1 CDS CJJ81176_0828 NC_008787.1 759716 760495 D Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase 759716..760495 Campylobacter jejuni subsp. jejuni 81-176 4683022 YP_001000497.1 CDS CJJ81176_0829 NC_008787.1 760536 760841 R hypothetical protein complement(760536..760841) Campylobacter jejuni subsp. jejuni 81-176 4682088 YP_001000498.1 CDS CJJ81176_0830 NC_008787.1 760853 761449 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(760853..761449) Campylobacter jejuni subsp. jejuni 81-176 4683392 YP_001000499.1 CDS nadE NC_008787.1 761523 762263 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 761523..762263 Campylobacter jejuni subsp. jejuni 81-176 4683760 YP_001000500.1 CDS lpxK NC_008787.1 762267 763193 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 762267..763193 Campylobacter jejuni subsp. jejuni 81-176 4682588 YP_001000501.1 CDS thrC NC_008787.1 763190 764602 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 763190..764602 Campylobacter jejuni subsp. jejuni 81-176 4683318 YP_001000502.1 CDS kdsB NC_008787.1 764599 765318 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 764599..765318 Campylobacter jejuni subsp. jejuni 81-176 4682770 YP_001000503.1 CDS CJJ81176_0835 NC_008787.1 765409 766743 D hypothetical protein 765409..766743 Campylobacter jejuni subsp. jejuni 81-176 4682141 YP_001000504.1 CDS CJJ81176_0836 NC_008787.1 766837 767607 D identified by match to protein family HMM PF00497; amino acid-binding protein 766837..767607 Campylobacter jejuni subsp. jejuni 81-176 4683431 YP_001000505.1 CDS fliP NC_008787.1 767623 768357 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(767623..768357) Campylobacter jejuni subsp. jejuni 81-176 4682809 YP_001000506.1 CDS glmU NC_008787.1 768500 769789 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 768500..769789 Campylobacter jejuni subsp. jejuni 81-176 4682533 YP_001000507.1 CDS coaBC NC_008787.1 769786 770940 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 769786..770940 Campylobacter jejuni subsp. jejuni 81-176 4682265 YP_001000508.1 CDS CJJ81176_0840 NC_008787.1 770943 771554 D hypothetical protein 770943..771554 Campylobacter jejuni subsp. jejuni 81-176 4683466 YP_001000509.1 CDS uppS NC_008787.1 771558 772226 D identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase 771558..772226 Campylobacter jejuni subsp. jejuni 81-176 4682235 YP_001000510.1 CDS CJJ81176_0842 NC_008787.1 772223 772999 D identified by match to protein family HMM PF01478; match to protein family HMM PF06750; A24 family peptidase 772223..772999 Campylobacter jejuni subsp. jejuni 81-176 4682262 YP_001000511.1 CDS CJJ81176_0843 NC_008787.1 772999 774024 D identified by match to protein family HMM PF03739; hypothetical protein 772999..774024 Campylobacter jejuni subsp. jejuni 81-176 4683177 YP_001000512.1 CDS truA NC_008787.1 774021 774746 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 774021..774746 Campylobacter jejuni subsp. jejuni 81-176 4683140 YP_001000513.1 CDS ilvA NC_008787.1 774743 775954 R catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase complement(774743..775954) Campylobacter jejuni subsp. jejuni 81-176 4682900 YP_001000514.1 CDS CJJ81176_0846 NC_008787.1 775954 776367 R identified by match to protein family HMM PF02629; CoA-binding domain-containing protein complement(775954..776367) Campylobacter jejuni subsp. jejuni 81-176 4683759 YP_001000515.1 CDS CJJ81176_0847 NC_008787.1 776486 776902 D identified by match to protein family HMM PF04323; hypothetical protein 776486..776902 Campylobacter jejuni subsp. jejuni 81-176 4682668 YP_001000516.1 CDS trmA NC_008787.1 776889 777962 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(776889..777962) Campylobacter jejuni subsp. jejuni 81-176 4682322 YP_001000517.1 CDS CJJ81176_0849 NC_008787.1 777959 779692 R identified by match to protein family HMM PF03553; Na+/H+ antiporter family protein complement(777959..779692) Campylobacter jejuni subsp. jejuni 81-176 4682741 YP_001000518.1 CDS CJJ81176_0850 NC_008787.1 779689 780438 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase/reductase family oxidoreductase complement(779689..780438) Campylobacter jejuni subsp. jejuni 81-176 4682123 YP_001000519.1 CDS CJJ81176_0851 NC_008787.1 780435 781661 R identified by match to protein family HMM PF00023; ankyrin repeat-containing protein complement(780435..781661) Campylobacter jejuni subsp. jejuni 81-176 4683384 YP_001000520.1 CDS acnB NC_008787.1 781721 784267 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(781721..784267) Campylobacter jejuni subsp. jejuni 81-176 4682487 YP_001000521.1 CDS ogt NC_008787.1 784322 784774 D identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine S-methyltransferase 784322..784774 Campylobacter jejuni subsp. jejuni 81-176 4683687 YP_001000522.1 CDS CJJ81176_0854 NC_008787.1 784766 785707 R hypothetical protein complement(784766..785707) Campylobacter jejuni subsp. jejuni 81-176 4682983 YP_001000523.1 CDS metS NC_008787.1 785711 787597 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(785711..787597) Campylobacter jejuni subsp. jejuni 81-176 4683754 YP_001000524.1 CDS CJJ81176_0856 NC_008787.1 787607 787771 R hypothetical protein complement(787607..787771) Campylobacter jejuni subsp. jejuni 81-176 4682333 YP_001000525.1 CDS fbp NC_008787.1 787797 788639 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(787797..788639) Campylobacter jejuni subsp. jejuni 81-176 4683221 YP_001000526.1 CDS mobB NC_008787.1 788641 789132 R identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176; molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(788641..789132) Campylobacter jejuni subsp. jejuni 81-176 4682636 YP_001000527.1 CDS CJJ81176_0859 NC_008787.1 789610 791235 R identified by match to protein family HMM PF01464; soluble lytic murein transglycosylase, putative complement(789610..791235) Campylobacter jejuni subsp. jejuni 81-176 4683641 YP_001000528.1 CDS CJJ81176_0860 NC_008787.1 791232 791513 R identified by match to protein family HMM PF02325; YGGT family protein complement(791232..791513) Campylobacter jejuni subsp. jejuni 81-176 4683474 YP_001000529.1 CDS gltX-1 NC_008787.1 791516 792811 R charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase complement(791516..792811) Campylobacter jejuni subsp. jejuni 81-176 4683370 YP_001000530.1 CDS CJJ81176_0862 NC_008787.1 792897 794021 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 792897..794021 Campylobacter jejuni subsp. jejuni 81-176 4683688 YP_001000531.1 CDS psd NC_008787.1 794018 794818 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 794018..794818 Campylobacter jejuni subsp. jejuni 81-176 4682872 YP_001000532.1 CDS CJJ81176_0864 NC_008787.1 794815 795096 R identified by match to protein family HMM TIGR00789; FlhB domain-containing protein complement(794815..795096) Campylobacter jejuni subsp. jejuni 81-176 4683394 YP_001000533.1 CDS CJJ81176_0865 NC_008787.1 795093 797342 R hypothetical protein complement(795093..797342) Campylobacter jejuni subsp. jejuni 81-176 4682174 YP_001000534.1 CDS CJJ81176_0866 NC_008787.1 797335 798522 R identified by match to protein family HMM PF07690; major facilitator family protein complement(797335..798522) Campylobacter jejuni subsp. jejuni 81-176 4683201 YP_001000535.1 CDS CJJ81176_0867 NC_008787.1 798500 799003 R hypothetical protein complement(798500..799003) Campylobacter jejuni subsp. jejuni 81-176 4683481 YP_001000536.1 CDS CJJ81176_0868 NC_008787.1 799003 799218 R hypothetical protein complement(799003..799218) Campylobacter jejuni subsp. jejuni 81-176 4682815 YP_001000537.1 CDS hemL NC_008787.1 799329 800603 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(799329..800603) Campylobacter jejuni subsp. jejuni 81-176 4683680 YP_001000538.1 CDS CJJ81176_0870 NC_008787.1 800600 800947 R hypothetical protein complement(800600..800947) Campylobacter jejuni subsp. jejuni 81-176 4683046 YP_001000539.1 CDS folD NC_008787.1 801027 801875 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 801027..801875 Campylobacter jejuni subsp. jejuni 81-176 4683105 YP_001000540.1 CDS lepB NC_008787.1 801885 802733 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 801885..802733 Campylobacter jejuni subsp. jejuni 81-176 4683111 YP_001000541.1 CDS CJJ81176_0873 NC_008787.1 802755 803915 R identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis MoeA protein, putative complement(802755..803915) Campylobacter jejuni subsp. jejuni 81-176 4683491 YP_001000542.1 CDS murA NC_008787.1 803912 805168 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(803912..805168) Campylobacter jejuni subsp. jejuni 81-176 4682260 YP_001000543.1 CDS CJJ81176_0875 NC_008787.1 805234 805662 R hypothetical protein complement(805234..805662) Campylobacter jejuni subsp. jejuni 81-176 4683558 YP_001000544.1 CDS CJJ81176_0876 NC_008787.1 805757 806629 D identified by match to protein family HMM PF00892; integral membrane protein 805757..806629 Campylobacter jejuni subsp. jejuni 81-176 4682950 YP_001000545.1 CDS pabA NC_008787.1 806616 807182 R identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; para-aminobenzoate synthase glutamine amidotransferase, component II complement(806616..807182) Campylobacter jejuni subsp. jejuni 81-176 4683381 YP_001000546.1 CDS pabB NC_008787.1 807179 808963 R identified by match to protein family HMM PF00425; para-aminobenzoate synthase glutamine amidotransferase, component I complement(807179..808963) Campylobacter jejuni subsp. jejuni 81-176 4682156 YP_001000547.1 CDS CJJ81176_0879 NC_008787.1 808953 810017 R identified by match to protein family HMM PF00589; phage integrase family site specific recombinase complement(808953..810017) Campylobacter jejuni subsp. jejuni 81-176 4682503 YP_001000548.1 CDS dsbA NC_008787.1 810644 811306 D thiol:disulfide interchange protein DsbA 810644..811306 Campylobacter jejuni subsp. jejuni 81-176 4683335 YP_001000549.1 CDS dsbB NC_008787.1 811318 812112 D putative disulfide oxidoreductase 811318..812112 Campylobacter jejuni subsp. jejuni 81-176 4683761 YP_001000550.1 CDS CJJ81176_0882 NC_008787.1 812200 814062 D identified by match to protein family HMM PF05935; arylsulfate sulfotransferase, degenerate 812200..814062 Campylobacter jejuni subsp. jejuni 81-176 4683055 YP_001000551.1 CDS CJJ81176_0883 NC_008787.1 814118 814789 D identified by match to protein family HMM PF01323; thiol:disulfide interchange protein DsbA, putative 814118..814789 Campylobacter jejuni subsp. jejuni 81-176 4683442 YP_001000552.1 CDS CJJ81176_0884 NC_008787.1 814823 815200 R cytochrome c family protein, degenerate complement(814823..815200) Campylobacter jejuni subsp. jejuni 81-176 4683191 YP_001000553.1 CDS CJJ81176_0885 NC_008787.1 815264 815809 R cytochrome C complement(815264..815809) Campylobacter jejuni subsp. jejuni 81-176 4682361 YP_001000554.1 CDS CJJ81176_0886 NC_008787.1 816019 816159 D hypothetical protein 816019..816159 Campylobacter jejuni subsp. jejuni 81-176 4682892 YP_001000555.1 CDS CJJ81176_0887 NC_008787.1 816147 816779 R putative periplasmic protein complement(816147..816779) Campylobacter jejuni subsp. jejuni 81-176 4683671 YP_001000556.1 CDS CJJ81176_0888 NC_008787.1 816776 817018 R hypothetical protein complement(816776..817018) Campylobacter jejuni subsp. jejuni 81-176 4682643 YP_001000557.1 CDS CJJ81176_0889 NC_008787.1 817002 818048 R hypothetical protein complement(817002..818048) Campylobacter jejuni subsp. jejuni 81-176 4682238 YP_001000558.1 CDS flhA NC_008787.1 818057 820192 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(818057..820192) Campylobacter jejuni subsp. jejuni 81-176 4683577 YP_001000559.1 CDS CJJ81176_0891 NC_008787.1 820218 820628 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; RrF2 family protein, putative complement(820218..820628) Campylobacter jejuni subsp. jejuni 81-176 4682372 YP_001000560.1 CDS rpsO NC_008787.1 820803 821075 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 820803..821075 Campylobacter jejuni subsp. jejuni 81-176 4682659 YP_001000561.1 CDS CJJ81176_0893 NC_008787.1 821161 824001 R identified by match to protein family HMM PF01580; cell division protein FtsK, putative complement(821161..824001) Campylobacter jejuni subsp. jejuni 81-176 4683469 YP_001000562.1 CDS CJJ81176_0894 NC_008787.1 824111 826363 R with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; lagellar hook-associated protein FlgL complement(824111..826363) Campylobacter jejuni subsp. jejuni 81-176 4682915 YP_001000563.1 CDS CJJ81176_0897 NC_008787.1 826745 828676 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(826745..828676) Campylobacter jejuni subsp. jejuni 81-176 4682179 YP_001000564.1 CDS CJJ81176_0898 NC_008787.1 828680 829969 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(828680..829969) Campylobacter jejuni subsp. jejuni 81-176 4682921 YP_001000565.1 CDS CJJ81176_0899 NC_008787.1 829963 830625 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(829963..830625) Campylobacter jejuni subsp. jejuni 81-176 4682261 YP_001000566.1 CDS serA NC_008787.1 830612 832195 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(830612..832195) Campylobacter jejuni subsp. jejuni 81-176 4683171 YP_001000567.1 CDS CJJ81176_0901 NC_008787.1 832192 832680 R hypothetical protein complement(832192..832680) Campylobacter jejuni subsp. jejuni 81-176 4682623 YP_001000568.1 CDS rpsA NC_008787.1 832680 834350 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(832680..834350) Campylobacter jejuni subsp. jejuni 81-176 4683568 YP_001000569.1 CDS ispH NC_008787.1 834482 835315 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(834482..835315) Campylobacter jejuni subsp. jejuni 81-176 4683315 YP_001000570.1 CDS aroA NC_008787.1 835305 836576 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(835305..836576) Campylobacter jejuni subsp. jejuni 81-176 4683705 YP_001000571.1 CDS pheT NC_008787.1 836588 838909 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(836588..838909) Campylobacter jejuni subsp. jejuni 81-176 4682555 YP_001000572.1 CDS pheS NC_008787.1 838906 839898 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(838906..839898) Campylobacter jejuni subsp. jejuni 81-176 4683533 YP_001000573.1 CDS CJJ81176_0907 NC_008787.1 840021 840386 D identified by match to protein family HMM PF01230; HIT family protein 840021..840386 Campylobacter jejuni subsp. jejuni 81-176 4682685 YP_001000574.1 CDS thiJ NC_008787.1 840416 840985 R identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme complement(840416..840985) Campylobacter jejuni subsp. jejuni 81-176 4683710 YP_001000575.1 CDS CJJ81176_0909 NC_008787.1 840978 841157 R hypothetical protein complement(840978..841157) Campylobacter jejuni subsp. jejuni 81-176 4682869 YP_001000576.1 CDS CJJ81176_0910 NC_008787.1 841241 841984 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine amino acid ABC transporter permease 841241..841984 Campylobacter jejuni subsp. jejuni 81-176 4682948 YP_001000577.1 CDS CJJ81176_0911 NC_008787.1 841977 842705 D identified by match to protein family HMM PF00005; amino acid ABC transporter, ATP-binding protein 841977..842705 Campylobacter jejuni subsp. jejuni 81-176 4682368 YP_001000578.1 CDS CJJ81176_0912 NC_008787.1 842733 844199 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino acid carrier protein complement(842733..844199) Campylobacter jejuni subsp. jejuni 81-176 4682378 YP_001000579.1 CDS CJJ81176_0913 NC_008787.1 844303 844770 R identified by match to protein family HMM PF00588; RNA methyltransferase complement(844303..844770) Campylobacter jejuni subsp. jejuni 81-176 4683202 YP_001000580.1 CDS alr NC_008787.1 844773 845759 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(844773..845759) Campylobacter jejuni subsp. jejuni 81-176 4682205 YP_001000581.1 CDS CJJ81176_0915 NC_008787.1 845760 846737 R hypothetical protein complement(845760..846737) Campylobacter jejuni subsp. jejuni 81-176 4682936 YP_001000582.1 CDS CJJ81176_0916 NC_008787.1 846895 847365 D hypothetical protein 846895..847365 Campylobacter jejuni subsp. jejuni 81-176 4683511 YP_001000583.1 CDS CJJ81176_0917 NC_008787.1 847451 847870 D identified by match to protein family HMM PF04314; hypothetical protein 847451..847870 Campylobacter jejuni subsp. jejuni 81-176 4683282 YP_001000584.1 CDS CJJ81176_0918 NC_008787.1 847874 848326 D hypothetical protein 847874..848326 Campylobacter jejuni subsp. jejuni 81-176 4683146 YP_001000585.1 CDS CJJ81176_0919 NC_008787.1 848323 848883 D identified by match to protein family HMM PF02630; SCO1/SenC family protein 848323..848883 Campylobacter jejuni subsp. jejuni 81-176 4683376 YP_001000586.1 CDS cysK NC_008787.1 848890 849651 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A complement(848890..849651) Campylobacter jejuni subsp. jejuni 81-176 4682894 YP_001000587.1 CDS hup NC_008787.1 849914 850210 R identified by match to protein family HMM PF00216; DNA-binding protein HU complement(849914..850210) Campylobacter jejuni subsp. jejuni 81-176 4682511 YP_001000588.1 CDS ciaB NC_008787.1 850312 852144 R invasion antigen B complement(850312..852144) Campylobacter jejuni subsp. jejuni 81-176 4682759 YP_001000589.1 CDS CJJ81176_0922 NC_008787.1 852206 852619 D identified by match to protein family HMM PF03061; thioesterase family protein 852206..852619 Campylobacter jejuni subsp. jejuni 81-176 4682335 YP_001000590.1 CDS CJJ81176_0923 NC_008787.1 852659 852859 R identified by match to protein family HMM PF04328; hypothetical protein complement(852659..852859) Campylobacter jejuni subsp. jejuni 81-176 4682648 YP_001000591.1 CDS cstA NC_008787.1 852837 854948 R identified by match to protein family HMM PF02554; carbon starvation protein A complement(852837..854948) Campylobacter jejuni subsp. jejuni 81-176 4682638 YP_001000592.1 CDS prsA NC_008787.1 855115 856044 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(855115..856044) Campylobacter jejuni subsp. jejuni 81-176 4682768 YP_001000593.1 CDS CJJ81176_0926 NC_008787.1 856152 856811 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, permease protein PEB1 complement(856152..856811) Campylobacter jejuni subsp. jejuni 81-176 4683648 YP_001000594.1 CDS CJJ81176_0927 NC_008787.1 856822 857574 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, permease protein PEB1 complement(856822..857574) Campylobacter jejuni subsp. jejuni 81-176 4683249 YP_001000595.1 CDS pebA NC_008787.1 857576 858355 R PEB1; bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein complement(857576..858355) Campylobacter jejuni subsp. jejuni 81-176 4682602 YP_001000596.1 CDS pebC NC_008787.1 858377 859105 R identified by match to protein family HMM PF00005; amino acid ABC transporter, ATP-binding protein PEB1 complement(858377..859105) Campylobacter jejuni subsp. jejuni 81-176 4682094 YP_001000597.1 CDS cheR NC_008787.1 859241 860029 R identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein methyltransferase CheR complement(859241..860029) Campylobacter jejuni subsp. jejuni 81-176 4683646 YP_001000598.1 CDS cheB NC_008787.1 860045 860599 R identified by match to protein family HMM PF01339; protein-glutamate methylesterase CheB complement(860045..860599) Campylobacter jejuni subsp. jejuni 81-176 4682501 YP_001000599.1 CDS rpiB NC_008787.1 860765 861202 D identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B 860765..861202 Campylobacter jejuni subsp. jejuni 81-176 4683751 YP_001000600.1 CDS CJJ81176_1732 NC_008787.1 861202 861534 D hypothetical protein 861202..861534 Campylobacter jejuni subsp. jejuni 81-176 4682902 YP_001000601.1 CDS apt NC_008787.1 861531 862079 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 861531..862079 Campylobacter jejuni subsp. jejuni 81-176 4683739 YP_001000602.1 CDS CJJ81176_0935 NC_008787.1 862098 862694 D DedA family protein 862098..862694 Campylobacter jejuni subsp. jejuni 81-176 4683102 YP_001000603.1 CDS CJJ81176_0936 NC_008787.1 862691 864142 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 862691..864142 Campylobacter jejuni subsp. jejuni 81-176 4683483 YP_001000604.1 CDS CJJ81176_0937 NC_008787.1 864139 865242 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 864139..865242 Campylobacter jejuni subsp. jejuni 81-176 4683473 YP_001000605.1 CDS argH NC_008787.1 865264 866646 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(865264..866646) Campylobacter jejuni subsp. jejuni 81-176 4682580 YP_001000606.1 CDS pckA NC_008787.1 866656 868230 R PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase complement(866656..868230) Campylobacter jejuni subsp. jejuni 81-176 4683218 YP_001000607.1 CDS CJJ81176_0940 NC_008787.1 868243 870042 R identified by match to protein family HMM PF00364; match to protein family HMM PF00682; oxaloacetate decarboxylase, alpha subunit, putative complement(868243..870042) Campylobacter jejuni subsp. jejuni 81-176 4682246 YP_001000608.1 CDS CJJ81176_0941 NC_008787.1 870075 871415 R identified by match to protein family HMM PF00209; sodium transporter, putative complement(870075..871415) Campylobacter jejuni subsp. jejuni 81-176 4682453 YP_001000609.1 CDS CJJ81176_0942 NC_008787.1 871428 872762 R identified by match to protein family HMM PF00209; sodium transporter, putative complement(871428..872762) Campylobacter jejuni subsp. jejuni 81-176 4683129 YP_001000610.1 CDS atpE NC_008787.1 872996 873334 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 872996..873334 Campylobacter jejuni subsp. jejuni 81-176 4683587 YP_001000611.1 CDS CJJ81176_0945 NC_008787.1 874059 874214 D hypothetical protein 874059..874214 Campylobacter jejuni subsp. jejuni 81-176 4682676 YP_001000612.1 CDS CJJ81176_0946 NC_008787.1 874531 874758 D hypothetical protein 874531..874758 Campylobacter jejuni subsp. jejuni 81-176 4682248 YP_001000613.1 CDS CJJ81176_0947 NC_008787.1 874762 875121 D identified by match to protein family HMM PF03681; hypothetical protein 874762..875121 Campylobacter jejuni subsp. jejuni 81-176 4683162 YP_001000614.1 CDS CJJ81176_0948 NC_008787.1 875453 875584 R hypothetical protein complement(875453..875584) Campylobacter jejuni subsp. jejuni 81-176 4683276 YP_001000615.1 CDS CJJ81176_0949 NC_008787.1 875589 876473 R hypothetical protein complement(875589..876473) Campylobacter jejuni subsp. jejuni 81-176 4683413 YP_001000616.1 CDS CJJ81176_0950 NC_008787.1 876487 877011 R hypothetical protein complement(876487..877011) Campylobacter jejuni subsp. jejuni 81-176 4682842 YP_001000617.1 CDS CJJ81176_0951 NC_008787.1 877026 877148 R hypothetical protein complement(877026..877148) Campylobacter jejuni subsp. jejuni 81-176 4683660 YP_001000618.1 CDS CJJ81176_0952 NC_008787.1 877197 878312 R hypothetical protein complement(877197..878312) Campylobacter jejuni subsp. jejuni 81-176 4683294 YP_001000619.1 CDS CJJ81176_0953 NC_008787.1 878596 879048 R hypothetical protein complement(878596..879048) Campylobacter jejuni subsp. jejuni 81-176 4683456 YP_001000620.1 CDS CJJ81176_0954 NC_008787.1 879618 880529 D identified by match to protein family HMM PF03547; hypothetical protein 879618..880529 Campylobacter jejuni subsp. jejuni 81-176 4683010 YP_001000621.1 CDS aas NC_008787.1 880537 884049 R identified by match to protein family HMM PF00501; match to protein family HMM PF01553; match to protein family HMM PF07690; 2-acyl-glycerophospho-ethanolamine acyltransferase complement(880537..884049) Campylobacter jejuni subsp. jejuni 81-176 4683130 YP_001000622.1 CDS CJJ81176_0956 NC_008787.1 884094 884474 R hypothetical protein complement(884094..884474) Campylobacter jejuni subsp. jejuni 81-176 4682506 YP_001000623.1 CDS CJJ81176_0964 NC_008787.1 885274 886059 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease complement(885274..886059) Campylobacter jejuni subsp. jejuni 81-176 4682585 YP_001000624.1 CDS CJJ81176_0965 NC_008787.1 886082 887287 R identified by match to protein family HMM PF02687; permease, putative complement(886082..887287) Campylobacter jejuni subsp. jejuni 81-176 4683545 YP_001000625.1 CDS secA NC_008787.1 887284 889872 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(887284..889872) Campylobacter jejuni subsp. jejuni 81-176 4683120 YP_001000626.1 CDS lolA NC_008787.1 889987 890481 D participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 889987..890481 Campylobacter jejuni subsp. jejuni 81-176 4682479 YP_001000627.1 CDS CJJ81176_0968 NC_008787.1 890478 891212 R hypothetical protein complement(890478..891212) Campylobacter jejuni subsp. jejuni 81-176 4683617 YP_001000628.1 CDS CJJ81176_0969 NC_008787.1 891222 892565 R hypothetical protein complement(891222..892565) Campylobacter jejuni subsp. jejuni 81-176 4682886 YP_001000629.1 CDS CJJ81176_0970 NC_008787.1 892614 893960 D putative lipoprotein 892614..893960 Campylobacter jejuni subsp. jejuni 81-176 4682494 YP_001000630.1 CDS CJJ81176_0971 NC_008787.1 893972 894844 R identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase complement(893972..894844) Campylobacter jejuni subsp. jejuni 81-176 4683089 YP_001000631.1 CDS CJJ81176_0972 NC_008787.1 894841 895728 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(894841..895728) Campylobacter jejuni subsp. jejuni 81-176 4682170 YP_001000632.1 CDS CJJ81176_0973 NC_008787.1 895725 896702 R identified by match to protein family HMM PF04371; peptidyl-arginine deiminase family protein complement(895725..896702) Campylobacter jejuni subsp. jejuni 81-176 4683686 YP_001000633.1 CDS CJJ81176_0974 NC_008787.1 896801 897235 R identified by match to protein family HMM PF03724; putative lipoprotein complement(896801..897235) Campylobacter jejuni subsp. jejuni 81-176 4682251 YP_001000634.1 CDS CJJ81176_0975 NC_008787.1 897245 898837 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; membrane protein, putative, degenerate complement(897245..898837) Campylobacter jejuni subsp. jejuni 81-176 4682452 YP_001000635.1 CDS purH NC_008787.1 898936 900468 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(898936..900468) Campylobacter jejuni subsp. jejuni 81-176 4683295 YP_001000636.1 CDS CJJ81176_0977 NC_008787.1 900471 901109 R identified by match to protein family HMM PF00226; DnaJ domain-containing protein complement(900471..901109) Campylobacter jejuni subsp. jejuni 81-176 4682802 YP_001000637.1 CDS purL NC_008787.1 901238 903424 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II complement(901238..903424) Campylobacter jejuni subsp. jejuni 81-176 4683454 YP_001000638.1 CDS trmE NC_008787.1 903435 904763 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(903435..904763) Campylobacter jejuni subsp. jejuni 81-176 4683065 YP_001000639.1 CDS CJJ81176_0980 NC_008787.1 904756 905574 R hypothetical protein complement(904756..905574) Campylobacter jejuni subsp. jejuni 81-176 4683752 YP_001000640.1 CDS CJJ81176_0981 NC_008787.1 905578 907164 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC complement(905578..907164) Campylobacter jejuni subsp. jejuni 81-176 4683339 YP_001000641.1 CDS CJJ81176_0982 NC_008787.1 907161 907502 R identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein complement(907161..907502) Campylobacter jejuni subsp. jejuni 81-176 4683327 YP_001000642.1 CDS rnpA NC_008787.1 907499 907825 R identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component complement(907499..907825) Campylobacter jejuni subsp. jejuni 81-176 4682455 YP_001000643.1 CDS rpmH NC_008787.1 907822 907956 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(907822..907956) Campylobacter jejuni subsp. jejuni 81-176 4683082 YP_001000644.1 CDS CJJ81176_0985 NC_008787.1 908087 908566 D identified by match to protein family HMM PF00583; acetyltransferase 908087..908566 Campylobacter jejuni subsp. jejuni 81-176 4682259 YP_001000645.1 CDS CJJ81176_0986 NC_008787.1 908593 909171 D hypothetical protein 908593..909171 Campylobacter jejuni subsp. jejuni 81-176 4682717 YP_001000646.1 CDS CJJ81176_0987 NC_008787.1 909207 910358 D hypothetical protein 909207..910358 Campylobacter jejuni subsp. jejuni 81-176 4683538 YP_001000647.1 CDS CJJ81176_0988 NC_008787.1 910350 910724 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; thioesterase family protein complement(910350..910724) Campylobacter jejuni subsp. jejuni 81-176 4683573 YP_001000648.1 CDS CJJ81176_0990 NC_008787.1 911259 911441 D putative periplasmic protein 911259..911441 Campylobacter jejuni subsp. jejuni 81-176 4683104 YP_001000649.1 CDS CJJ81176_0991 NC_008787.1 911443 911598 D putative periplasmic protein 911443..911598 Campylobacter jejuni subsp. jejuni 81-176 4682849 YP_001000650.1 CDS CJJ81176_0992 NC_008787.1 911595 912038 D putative periplasmic protein 911595..912038 Campylobacter jejuni subsp. jejuni 81-176 4683304 YP_001000651.1 CDS CJJ81176_0993 NC_008787.1 912068 912184 D putative periplasmic protein 912068..912184 Campylobacter jejuni subsp. jejuni 81-176 4682208 YP_001000652.1 CDS CJJ81176_1741 NC_008787.1 912229 913098 D putative periplasmic protein 912229..913098 Campylobacter jejuni subsp. jejuni 81-176 4683008 YP_001000653.1 CDS CJJ81176_1742 NC_008787.1 913484 913612 D hypothetical protein 913484..913612 Campylobacter jejuni subsp. jejuni 81-176 4682704 YP_001000654.1 CDS CJJ81176_1743 NC_008787.1 913709 915370 D identified by match to protein family HMM PF05860; match to protein family HMM TIGR01901; putative periplasmic protein 913709..915370 Campylobacter jejuni subsp. jejuni 81-176 4682089 YP_001000655.1 CDS CJJ81176_1744 NC_008787.1 915632 917287 D identified by match to protein family HMM PF01103; match to protein family HMM PF08479; hypothetical protein 915632..917287 Campylobacter jejuni subsp. jejuni 81-176 4682812 YP_001000656.1 CDS CJJ81176_0995 NC_008787.1 917398 918273 D identified by match to protein family HMM PF08003; methyltransferase, putative 917398..918273 Campylobacter jejuni subsp. jejuni 81-176 4682516 YP_001000657.1 CDS CJJ81176_0996 NC_008787.1 918346 918924 D hypothetical protein 918346..918924 Campylobacter jejuni subsp. jejuni 81-176 4683087 YP_001000658.1 CDS CJJ81176_0997 NC_008787.1 918925 919098 R putative lipoprotein complement(918925..919098) Campylobacter jejuni subsp. jejuni 81-176 4683358 YP_001000659.1 CDS CJJ81176_0998 NC_008787.1 919107 919634 R identified by match to protein family HMM PF00565; thermonuclease family protein complement(919107..919634) Campylobacter jejuni subsp. jejuni 81-176 4682152 YP_001000660.1 CDS pepD NC_008787.1 919702 920970 D aminoacyl-histidine dipeptidase 919702..920970 Campylobacter jejuni subsp. jejuni 81-176 4682917 YP_001000661.1 CDS cjaB NC_008787.1 920953 922200 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; CjaB protein complement(920953..922200) Campylobacter jejuni subsp. jejuni 81-176 4683565 YP_001000662.1 CDS cjaA NC_008787.1 922240 923079 R identified by match to protein family HMM PF00497; CjaA protein complement(922240..923079) Campylobacter jejuni subsp. jejuni 81-176 4682355 YP_001000663.1 CDS jlpA NC_008787.1 923299 924417 D surface-exposed lipoprotein 923299..924417 Campylobacter jejuni subsp. jejuni 81-176 4682683 YP_001000664.1 CDS CJJ81176_1003 NC_008787.1 924509 925249 D identified by match to protein family HMM PF03883; hypothetical protein 924509..925249 Campylobacter jejuni subsp. jejuni 81-176 4682736 YP_001000665.1 CDS hipO NC_008787.1 925253 926404 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; hippurate hydrolase complement(925253..926404) Campylobacter jejuni subsp. jejuni 81-176 4683713 YP_001000666.1 CDS CJJ81176_1005 NC_008787.1 926406 926981 R hypothetical protein complement(926406..926981) Campylobacter jejuni subsp. jejuni 81-176 4683019 YP_001000667.1 CDS CJJ81176_1006 NC_008787.1 927215 927625 R hypothetical protein complement(927215..927625) Campylobacter jejuni subsp. jejuni 81-176 4682398 YP_001000668.1 CDS CJJ81176_1007 NC_008787.1 927859 928065 D hypothetical protein 927859..928065 Campylobacter jejuni subsp. jejuni 81-176 4682498 YP_001000669.1 CDS CJJ81176_1008 NC_008787.1 928068 928829 R hypothetical protein complement(928068..928829) Campylobacter jejuni subsp. jejuni 81-176 4683412 YP_001000670.1 CDS CJJ81176_1009 NC_008787.1 928826 930091 R identified by match to protein family HMM PF00037; match to protein family HMM PF02754; iron-sulfur cluster-binding domain-containing protein complement(928826..930091) Campylobacter jejuni subsp. jejuni 81-176 4682130 YP_001000671.1 CDS hemN NC_008787.1 930093 931448 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(930093..931448) Campylobacter jejuni subsp. jejuni 81-176 4683348 YP_001000672.1 CDS CJJ81176_1011 NC_008787.1 931435 931926 R hypothetical protein complement(931435..931926) Campylobacter jejuni subsp. jejuni 81-176 4682582 YP_001000673.1 CDS argF NC_008787.1 931923 932843 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(931923..932843) Campylobacter jejuni subsp. jejuni 81-176 4682304 YP_001000674.1 CDS hemB NC_008787.1 932840 933823 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(932840..933823) Campylobacter jejuni subsp. jejuni 81-176 4682926 YP_001000675.1 CDS ribA NC_008787.1 933881 934441 D catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 933881..934441 Campylobacter jejuni subsp. jejuni 81-176 4682525 YP_001000676.1 CDS gidB NC_008787.1 934442 935008 D identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; methyltransferase GidB 934442..935008 Campylobacter jejuni subsp. jejuni 81-176 4683557 YP_001000677.1 CDS CJJ81176_1016 NC_008787.1 935024 935596 R hypothetical protein complement(935024..935596) Campylobacter jejuni subsp. jejuni 81-176 4683562 YP_001000678.1 CDS CJJ81176_1017 NC_008787.1 935691 936788 R identified by match to protein family HMM PF03601; hypothetical protein complement(935691..936788) Campylobacter jejuni subsp. jejuni 81-176 4682407 YP_001000679.1 CDS CJJ81176_1018 NC_008787.1 936901 937782 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 936901..937782 Campylobacter jejuni subsp. jejuni 81-176 4682616 YP_001000680.1 CDS rpoD NC_008787.1 937862 939730 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 937862..939730 Campylobacter jejuni subsp. jejuni 81-176 4683196 YP_001000681.1 CDS sixA NC_008787.1 939745 940257 R identified by match to protein family HMM PF00300; phosphohistidine phosphatase SixA complement(939745..940257) Campylobacter jejuni subsp. jejuni 81-176 4683353 YP_001000682.1 CDS CJJ81176_1021 NC_008787.1 940254 940772 R identified by match to protein family HMM PF01694; rhomboid family protein complement(940254..940772) Campylobacter jejuni subsp. jejuni 81-176 4683636 YP_001000683.1 CDS CJJ81176_1022 NC_008787.1 940870 941286 D hypothetical protein 940870..941286 Campylobacter jejuni subsp. jejuni 81-176 4683178 YP_001000684.1 CDS CJJ81176_1023 NC_008787.1 941294 942910 R identified by match to protein family HMM PF00004; match to protein family HMM PF06480; cell division protein FtsH, putative complement(941294..942910) Campylobacter jejuni subsp. jejuni 81-176 4682604 YP_001000685.1 CDS CJJ81176_1024 NC_008787.1 942914 944164 R identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; MiaB-like tRNA modifying enzyme complement(942914..944164) Campylobacter jejuni subsp. jejuni 81-176 4683280 YP_001000686.1 CDS CJJ81176_1025 NC_008787.1 944161 945732 R identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein complement(944161..945732) Campylobacter jejuni subsp. jejuni 81-176 4682204 YP_001000687.1 CDS aroB NC_008787.1 945729 946784 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(945729..946784) Campylobacter jejuni subsp. jejuni 81-176 4683613 YP_001000688.1 CDS CJJ81176_1027 NC_008787.1 946830 948230 R identified by match to protein family HMM PF02080; TrkA domain-containing protein complement(946830..948230) Campylobacter jejuni subsp. jejuni 81-176 4682097 YP_001000689.1 CDS tgt NC_008787.1 948260 949381 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 948260..949381 Campylobacter jejuni subsp. jejuni 81-176 4682611 YP_001000690.1 CDS CJJ81176_1029 NC_008787.1 949383 950150 D hypothetical protein 949383..950150 Campylobacter jejuni subsp. jejuni 81-176 4683155 YP_001000691.1 CDS CJJ81176_1031 NC_008787.1 950282 950746 R hypothetical protein complement(950282..950746) Campylobacter jejuni subsp. jejuni 81-176 4682661 YP_001000692.1 CDS CJJ81176_1032 NC_008787.1 950747 953992 R identified by match to protein family HMM PF01578; CcmF/CcyK/CcsA family cytochrome c biogenesis protein complement(950747..953992) Campylobacter jejuni subsp. jejuni 81-176 4683536 YP_001000693.1 CDS livF NC_008787.1 954010 954708 R identified by match to protein family HMM PF00005; high affinity branched-chain amino acid ABC transporter, ATP-binding protein complement(954010..954708) Campylobacter jejuni subsp. jejuni 81-176 4682824 YP_001000694.1 CDS livG NC_008787.1 954692 955462 R identified by match to protein family HMM PF00005; high affinity branched-chain amino acid ABC transporter, ATP-binding protein complement(954692..955462) Campylobacter jejuni subsp. jejuni 81-176 4682098 YP_001000695.1 CDS livM NC_008787.1 955459 956511 R identified by match to protein family HMM PF02653; high affinity branched-chain amino acid ABC transporter, permease protein complement(955459..956511) Campylobacter jejuni subsp. jejuni 81-176 4682686 YP_001000696.1 CDS livH NC_008787.1 956511 957407 R identified by match to protein family HMM PF02653; high affinity branched-chain amino acid ABC transporter, permease protein complement(956511..957407) Campylobacter jejuni subsp. jejuni 81-176 4682916 YP_001000697.1 CDS CJJ81176_1037 NC_008787.1 957426 958535 R identified by match to protein family HMM PF01094; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein complement(957426..958535) Campylobacter jejuni subsp. jejuni 81-176 4683237 YP_001000698.1 CDS CJJ81176_1038 NC_008787.1 958557 959672 R identified by match to protein family HMM PF01094; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein complement(958557..959672) Campylobacter jejuni subsp. jejuni 81-176 4682367 YP_001000699.1 CDS CJJ81176_1039 NC_008787.1 959703 960137 R cytochrome c family protein complement(959703..960137) Campylobacter jejuni subsp. jejuni 81-176 4683593 YP_001000700.1 CDS CJJ81176_1040 NC_008787.1 960146 960337 R porin domain-containing protein complement(960146..960337) Campylobacter jejuni subsp. jejuni 81-176 4683230 YP_001000701.1 CDS CJJ81176_1041 NC_008787.1 960389 960895 R identified by match to protein family HMM PF03350; hypothetical protein complement(960389..960895) Campylobacter jejuni subsp. jejuni 81-176 4682656 YP_001000702.1 CDS asd NC_008787.1 960904 961935 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(960904..961935) Campylobacter jejuni subsp. jejuni 81-176 4683186 YP_001000703.1 CDS CJJ81176_1043 NC_008787.1 961935 963236 R identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent DNA-binding response regulator complement(961935..963236) Campylobacter jejuni subsp. jejuni 81-176 4682421 YP_001000704.1 CDS CJJ81176_1044 NC_008787.1 963293 963610 R hypothetical protein complement(963293..963610) Campylobacter jejuni subsp. jejuni 81-176 4682102 YP_001000705.1 CDS CJJ81176_1045 NC_008787.1 963718 964233 R identified by match to protein family HMM PF04164; putative lipoprotein complement(963718..964233) Campylobacter jejuni subsp. jejuni 81-176 4683488 YP_001000706.1 CDS gyrA NC_008787.1 964302 966890 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(964302..966890) Campylobacter jejuni subsp. jejuni 81-176 4682497 YP_001000707.1 CDS ctsW NC_008787.1 966931 967506 R transformation system protein complement(966931..967506) Campylobacter jejuni subsp. jejuni 81-176 4683148 YP_001000708.1 CDS mapA NC_008787.1 967503 968147 R outer membrane liproprotein MapA complement(967503..968147) Campylobacter jejuni subsp. jejuni 81-176 4682391 YP_001000709.1 CDS lepA NC_008787.1 968224 970020 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(968224..970020) Campylobacter jejuni subsp. jejuni 81-176 4682997 YP_001000710.1 CDS CJJ81176_1050 NC_008787.1 970146 971420 D identified by match to protein family HMM PF02321; hypothetical protein 970146..971420 Campylobacter jejuni subsp. jejuni 81-176 4683025 YP_001000711.1 CDS CJJ81176_1051 NC_008787.1 971417 972157 D hypothetical protein 971417..972157 Campylobacter jejuni subsp. jejuni 81-176 4683462 YP_001000712.1 CDS CJJ81176_1052 NC_008787.1 972160 975177 D identified by match to protein family HMM PF00873; AcrB/AcrD/AcrF family protein 972160..975177 Campylobacter jejuni subsp. jejuni 81-176 4683100 YP_001000713.1 CDS CJJ81176_1053 NC_008787.1 975202 976008 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(975202..976008) Campylobacter jejuni subsp. jejuni 81-176 4683059 YP_001000714.1 CDS CJJ81176_1054 NC_008787.1 976009 976728 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(976009..976728) Campylobacter jejuni subsp. jejuni 81-176 4682899 YP_001000715.1 CDS CJJ81176_1055 NC_008787.1 976728 976979 R hypothetical protein complement(976728..976979) Campylobacter jejuni subsp. jejuni 81-176 4682718 YP_001000716.1 CDS accC-1 NC_008787.1 976983 978428 R biotin carboxylase; catalyses the carboxylation of the carrier protein which then transfers the carboxyl group to form malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase subunit A complement(976983..978428) Campylobacter jejuni subsp. jejuni 81-176 4683616 YP_001000717.1 CDS CJJ81176_1057 NC_008787.1 978568 979731 D identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell cycle protein FtsW 978568..979731 Campylobacter jejuni subsp. jejuni 81-176 4682858 YP_001000718.1 CDS murG NC_008787.1 979728 980756 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 979728..980756 Campylobacter jejuni subsp. jejuni 81-176 4683450 YP_001000719.1 CDS CJJ81176_1059 NC_008787.1 980727 981059 R hypothetical protein complement(980727..981059) Campylobacter jejuni subsp. jejuni 81-176 4683121 YP_001000720.1 CDS CJJ81176_1060 NC_008787.1 981022 981351 R putative transmembrane transport protein complement(981022..981351) Campylobacter jejuni subsp. jejuni 81-176 4682641 YP_001000721.1 CDS CJJ81176_1061 NC_008787.1 981329 981808 R putative transmembrane transport protein complement(981329..981808) Campylobacter jejuni subsp. jejuni 81-176 4683283 YP_001000722.1 CDS CJJ81176_1062 NC_008787.1 981892 982743 R hypothetical protein complement(981892..982743) Campylobacter jejuni subsp. jejuni 81-176 4682393 YP_001000723.1 CDS CJJ81176_1063 NC_008787.1 982806 983696 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(982806..983696) Campylobacter jejuni subsp. jejuni 81-176 4682928 YP_001000724.1 CDS CJJ81176_1064 NC_008787.1 983693 984298 R identified by match to protein family HMM PF02581; thiamine-phosphate pyrophosphorylase, putative complement(983693..984298) Campylobacter jejuni subsp. jejuni 81-176 4683305 YP_001000725.1 CDS thiH NC_008787.1 984288 985433 R in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH complement(984288..985433) Campylobacter jejuni subsp. jejuni 81-176 4682115 YP_001000726.1 CDS thiG NC_008787.1 985436 986212 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(985436..986212) Campylobacter jejuni subsp. jejuni 81-176 4683697 YP_001000727.1 CDS thiF NC_008787.1 986215 987018 R catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF complement(986215..987018) Campylobacter jejuni subsp. jejuni 81-176 4682804 YP_001000728.1 CDS thiS NC_008787.1 987015 987206 R identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS complement(987015..987206) Campylobacter jejuni subsp. jejuni 81-176 4682158 YP_001000729.1 CDS dapE NC_008787.1 987216 988313 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(987216..988313) Campylobacter jejuni subsp. jejuni 81-176 4682211 YP_001000730.1 CDS CJJ81176_1070 NC_008787.1 988317 988916 R identified by match to protein family HMM PF01810; amino acid transporter LysE complement(988317..988916) Campylobacter jejuni subsp. jejuni 81-176 4683691 YP_001000731.1 CDS CJJ81176_1071 NC_008787.1 988909 989610 R identified by match to protein family HMM PF02146; NAD-dependent deacetylase complement(988909..989610) Campylobacter jejuni subsp. jejuni 81-176 4682883 YP_001000732.1 CDS mutS NC_008787.1 989607 991814 R MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein complement(989607..991814) Campylobacter jejuni subsp. jejuni 81-176 4682751 YP_001000733.1 CDS CJJ81176_1073 NC_008787.1 991807 992157 R hypothetical protein complement(991807..992157) Campylobacter jejuni subsp. jejuni 81-176 4683717 YP_001000734.1 CDS murC NC_008787.1 992150 993445 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(992150..993445) Campylobacter jejuni subsp. jejuni 81-176 4682545 YP_001000735.1 CDS CJJ81176_1075 NC_008787.1 993512 995485 R identified by match to protein family HMM PF00884; putative integral membrane protein complement(993512..995485) Campylobacter jejuni subsp. jejuni 81-176 4682599 YP_001000736.1 CDS CJJ81176_1076 NC_008787.1 995497 996273 R carbon-nitrogen family hydrolase complement(995497..996273) Campylobacter jejuni subsp. jejuni 81-176 4683313 YP_001000737.1 CDS CJJ81176_1077 NC_008787.1 996266 996439 R exodeoxyribonuclease VII, small subunit, putative complement(996266..996439) Campylobacter jejuni subsp. jejuni 81-176 4683409 YP_001000738.1 CDS guaB NC_008787.1 996436 997893 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(996436..997893) Campylobacter jejuni subsp. jejuni 81-176 4682988 YP_001000739.1 CDS gatA NC_008787.1 997903 999264 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(997903..999264) Campylobacter jejuni subsp. jejuni 81-176 4683241 YP_001000740.1 CDS ileS NC_008787.1 999365 1002118 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(999365..1002118) Campylobacter jejuni subsp. jejuni 81-176 4683744 YP_001000741.1 CDS CJJ81176_1081 NC_008787.1 1002217 1003305 D identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; competence/damage-inducible domain-containing protein 1002217..1003305 Campylobacter jejuni subsp. jejuni 81-176 4683380 YP_001000742.1 CDS CJJ81176_1082 NC_008787.1 1003317 1003742 D identified by match to protein family HMM PF00583; acetyltransferase 1003317..1003742 Campylobacter jejuni subsp. jejuni 81-176 4682783 YP_001000743.1 CDS CJJ81176_1083 NC_008787.1 1003806 1004426 D identified by match to protein family HMM PF00881; nitroreducatase family protein, authentic frameshift 1003806..1004426 Campylobacter jejuni subsp. jejuni 81-176 4683662 YP_001000744.1 CDS CJJ81176_1084 NC_008787.1 1004426 1005031 D identified by match to protein family HMM PF00881; nitroreductase family protein 1004426..1005031 Campylobacter jejuni subsp. jejuni 81-176 4682807 YP_001000745.1 CDS pgsA NC_008787.1 1005156 1005692 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1005156..1005692 Campylobacter jejuni subsp. jejuni 81-176 4683404 YP_001000746.1 CDS CJJ81176_1086 NC_008787.1 1005689 1006795 D identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease, putative 1005689..1006795 Campylobacter jejuni subsp. jejuni 81-176 4683758 YP_001000747.1 CDS CJJ81176_1087 NC_008787.1 1006788 1007654 D identified by match to protein family HMM PF04393; hypothetical protein 1006788..1007654 Campylobacter jejuni subsp. jejuni 81-176 4682567 YP_001000748.1 CDS rpsF NC_008787.1 1007741 1008118 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1007741..1008118 Campylobacter jejuni subsp. jejuni 81-176 4683275 YP_001000749.1 CDS ssb NC_008787.1 1008127 1008675 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1008127..1008675 Campylobacter jejuni subsp. jejuni 81-176 4682190 YP_001000750.1 CDS rpsR NC_008787.1 1008686 1008946 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1008686..1008946 Campylobacter jejuni subsp. jejuni 81-176 4682974 YP_001000751.1 CDS lon NC_008787.1 1009006 1011381 R identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La complement(1009006..1011381) Campylobacter jejuni subsp. jejuni 81-176 4683167 YP_001000752.1 CDS CJJ81176_1092 NC_008787.1 1011398 1012045 R putative lipoprotein complement(1011398..1012045) Campylobacter jejuni subsp. jejuni 81-176 4682640 YP_001000753.1 CDS CJJ81176_1093 NC_008787.1 1012206 1012595 D binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 1012206..1012595 Campylobacter jejuni subsp. jejuni 81-176 4682932 YP_001000754.1 CDS proC NC_008787.1 1012595 1013326 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 1012595..1013326 Campylobacter jejuni subsp. jejuni 81-176 4682291 YP_001000755.1 CDS ctsT NC_008787.1 1013323 1013625 D transformation system protein 1013323..1013625 Campylobacter jejuni subsp. jejuni 81-176 4683702 YP_001000756.1 CDS CJJ81176_1096 NC_008787.1 1013622 1014284 D hypothetical protein 1013622..1014284 Campylobacter jejuni subsp. jejuni 81-176 4682860 YP_001000757.1 CDS CJJ81176_1097 NC_008787.1 1014281 1014733 D hypothetical protein 1014281..1014733 Campylobacter jejuni subsp. jejuni 81-176 4683467 YP_001000758.1 CDS hemD NC_008787.1 1014730 1015359 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase complement(1014730..1015359) Campylobacter jejuni subsp. jejuni 81-176 4682537 YP_001000759.1 CDS thiE NC_008787.1 1015337 1015969 R identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate pyrophosphorylase complement(1015337..1015969) Campylobacter jejuni subsp. jejuni 81-176 4683371 YP_001000760.1 CDS thiD NC_008787.1 1015959 1016771 R identified by match to protein family HMM PF01256; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase complement(1015959..1016771) Campylobacter jejuni subsp. jejuni 81-176 4683297 YP_001000761.1 CDS CJJ81176_1101 NC_008787.1 1016768 1017454 R identified by match to protein family HMM PF00730; endonuclease III, putative complement(1016768..1017454) Campylobacter jejuni subsp. jejuni 81-176 4683489 YP_001000762.1 CDS CJJ81176_1102 NC_008787.1 1017451 1018212 R identified by match to protein family HMM PF05673; hypothetical protein complement(1017451..1018212) Campylobacter jejuni subsp. jejuni 81-176 4682221 YP_001000763.1 CDS mfd NC_008787.1 1018214 1021150 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(1018214..1021150) Campylobacter jejuni subsp. jejuni 81-176 4683741 YP_001000764.1 CDS CJJ81176_1104 NC_008787.1 1021150 1021545 R identified by match to protein family HMM PF04519; hypothetical protein complement(1021150..1021545) Campylobacter jejuni subsp. jejuni 81-176 4682853 YP_001000765.1 CDS CJJ81176_1105 NC_008787.1 1021482 1022384 R identified by match to protein family HMM PF01551; M24/M37 family peptidase complement(1021482..1022384) Campylobacter jejuni subsp. jejuni 81-176 4683470 YP_001000766.1 CDS folC NC_008787.1 1022371 1023543 R identified by match to protein family HMM PF08245; match to protein family HMM TIGR01499; folC bifunctional protein complement(1022371..1023543) Campylobacter jejuni subsp. jejuni 81-176 4683764 YP_001000767.1 CDS CJJ81176_1107 NC_008787.1 1023521 1024918 R hypothetical protein complement(1023521..1024918) Campylobacter jejuni subsp. jejuni 81-176 4682671 YP_001000768.1 CDS CJJ81176_1108 NC_008787.1 1024902 1025246 R putative lipoprotein complement(1024902..1025246) Campylobacter jejuni subsp. jejuni 81-176 4683070 YP_001000769.1 CDS leuS NC_008787.1 1025411 1027840 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1025411..1027840) Campylobacter jejuni subsp. jejuni 81-176 4683724 YP_001000770.1 CDS secF NC_008787.1 1027850 1028821 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(1027850..1028821) Campylobacter jejuni subsp. jejuni 81-176 4682745 YP_001000771.1 CDS secD NC_008787.1 1028821 1030401 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(1028821..1030401) Campylobacter jejuni subsp. jejuni 81-176 4682984 YP_001000772.1 CDS yajC NC_008787.1 1030394 1030666 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(1030394..1030666) Campylobacter jejuni subsp. jejuni 81-176 4682952 YP_001000773.1 CDS cutE NC_008787.1 1030639 1031964 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1030639..1031964 Campylobacter jejuni subsp. jejuni 81-176 4682319 YP_001000774.1 CDS metK NC_008787.1 1032202 1033413 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1032202..1033413) Campylobacter jejuni subsp. jejuni 81-176 4682524 YP_001000775.1 CDS CJJ81176_1115 NC_008787.1 1033538 1034761 D involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 1033538..1034761 Campylobacter jejuni subsp. jejuni 81-176 4682690 YP_001000776.1 CDS pyrB NC_008787.1 1034771 1035658 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1034771..1035658 Campylobacter jejuni subsp. jejuni 81-176 4682408 YP_001000777.1 CDS pepF NC_008787.1 1035662 1037380 D identified by match to protein family HMM PF01432; match to protein family HMM TIGR02290; oligoendopeptidase F 1035662..1037380 Campylobacter jejuni subsp. jejuni 81-176 4683524 YP_001000778.1 CDS CJJ81176_1118 NC_008787.1 1037374 1037811 D hypothetical protein 1037374..1037811 Campylobacter jejuni subsp. jejuni 81-176 4682313 YP_001000779.1 CDS CJJ81176_1119 NC_008787.1 1037808 1039883 D identified by match to protein family HMM PF00580; ATP-dependent DNA helicase UvrD 1037808..1039883 Campylobacter jejuni subsp. jejuni 81-176 4683207 YP_001000780.1 CDS truB NC_008787.1 1039880 1040698 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1039880..1040698 Campylobacter jejuni subsp. jejuni 81-176 4683445 YP_001000781.1 CDS csrA NC_008787.1 1040692 1040919 D identified by match to protein family HMM PF02599; match to protein family HMM TIGR00202; carbon storage regulator 1040692..1040919 Campylobacter jejuni subsp. jejuni 81-176 4683159 YP_001000782.1 CDS ispE NC_008787.1 1040916 1041683 D catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1040916..1041683 Campylobacter jejuni subsp. jejuni 81-176 4682873 YP_001000783.1 CDS smpB NC_008787.1 1041680 1042132 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1041680..1042132 Campylobacter jejuni subsp. jejuni 81-176 4683003 YP_001000784.1 CDS CJJ81176_1124 NC_008787.1 1042143 1042745 D thioredoxin domain-containing protein 1042143..1042745 Campylobacter jejuni subsp. jejuni 81-176 4682438 YP_001000785.1 CDS CJJ81176_1125 NC_008787.1 1042745 1043035 D identified by match to protein family HMM PF02617; hypothetical protein 1042745..1043035 Campylobacter jejuni subsp. jejuni 81-176 4683263 YP_001000786.1 CDS clpA NC_008787.1 1043032 1045161 D identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; ATP-dependent Clp protease, ATP-binding subunit ClpA 1043032..1045161 Campylobacter jejuni subsp. jejuni 81-176 4683696 YP_001000787.1 CDS aat NC_008787.1 1045136 1045783 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1045136..1045783 Campylobacter jejuni subsp. jejuni 81-176 4682212 YP_001000788.1 CDS CJJ81176_1128 NC_008787.1 1045805 1047094 R identified by match to protein family HMM PF00015; match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein complement(1045805..1047094) Campylobacter jejuni subsp. jejuni 81-176 4683501 YP_001000789.1 CDS CJJ81176_1129 NC_008787.1 1047176 1047802 R identified by match to protein family HMM PF01914; MarC family integral membrane protein complement(1047176..1047802) Campylobacter jejuni subsp. jejuni 81-176 4682631 YP_001000790.1 CDS msrB NC_008787.1 1047817 1048176 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; a fusion protein of this enzyme with MsrA and thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase B complement(1047817..1048176) Campylobacter jejuni subsp. jejuni 81-176 4682655 YP_001000791.1 CDS CJJ81176_1131 NC_008787.1 1048266 1049063 D identified by match to protein family HMM PF04305; hypothetical protein 1048266..1049063 Campylobacter jejuni subsp. jejuni 81-176 4682307 YP_001000792.1 CDS pssA NC_008787.1 1049054 1049782 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(1049054..1049782) Campylobacter jejuni subsp. jejuni 81-176 4682944 YP_001000793.1 CDS CJJ81176_1133 NC_008787.1 1049792 1050409 R phosphatidylserine decarboxylase-related protein complement(1049792..1050409) Campylobacter jejuni subsp. jejuni 81-176 4683700 YP_001000794.1 CDS ftsH NC_008787.1 1050406 1052343 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; cell division protein FtsH complement(1050406..1052343) Campylobacter jejuni subsp. jejuni 81-176 4682760 YP_001000795.1 CDS prmA NC_008787.1 1052347 1053192 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(1052347..1053192) Campylobacter jejuni subsp. jejuni 81-176 4683666 YP_001000796.1 CDS cheY NC_008787.1 1053215 1053607 R identified by match to protein family HMM PF00072; chemotaxis protein CheY complement(1053215..1053607) Campylobacter jejuni subsp. jejuni 81-176 4682456 YP_001000797.1 CDS pglG NC_008787.1 1053720 1054613 R general glycosylation pathway protein complement(1053720..1054613) Campylobacter jejuni subsp. jejuni 81-176 4683051 YP_001000798.1 CDS pglF NC_008787.1 1054613 1056385 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; general glycosylation pathway protein complement(1054613..1056385) Campylobacter jejuni subsp. jejuni 81-176 4682867 YP_001000799.1 CDS pglE NC_008787.1 1056387 1057547 R identified by match to protein family HMM PF01041; general glycosylation pathway protein complement(1056387..1057547) Campylobacter jejuni subsp. jejuni 81-176 4683652 YP_001000800.1 CDS pglD NC_008787.1 1057645 1058256 R general glycosylation pathway protein complement(1057645..1058256) Campylobacter jejuni subsp. jejuni 81-176 4683651 YP_001000801.1 CDS pglC NC_008787.1 1058222 1058824 R identified by match to protein family HMM PF02397; general glycosylation pathway protein complement(1058222..1058824) Campylobacter jejuni subsp. jejuni 81-176 4682593 YP_001000802.1 CDS pglA NC_008787.1 1058817 1059947 R identified by match to protein family HMM PF00534; general glycosylation pathway protein complement(1058817..1059947) Campylobacter jejuni subsp. jejuni 81-176 4682312 YP_001000803.1 CDS pglB NC_008787.1 1059957 1062098 R identified by match to protein family HMM PF02516; general glycosylation pathway protein complement(1059957..1062098) Campylobacter jejuni subsp. jejuni 81-176 4682880 YP_001000804.1 CDS pglJ NC_008787.1 1062102 1063199 R identified by match to protein family HMM PF00534; general glycosylation pathway protein complement(1062102..1063199) Campylobacter jejuni subsp. jejuni 81-176 4682664 YP_001000805.1 CDS pglI NC_008787.1 1063187 1064116 R identified by match to protein family HMM PF00535; general glycosylation pathway protein complement(1063187..1064116) Campylobacter jejuni subsp. jejuni 81-176 4683156 YP_001000806.1 CDS pglH NC_008787.1 1064109 1065188 R identified by match to protein family HMM PF00534; general glycosylation pathway protein complement(1064109..1065188) Campylobacter jejuni subsp. jejuni 81-176 4683595 YP_001000807.1 CDS wlaB NC_008787.1 1065185 1066879 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter, permease/ATP-binding protein complement(1065185..1066879) Campylobacter jejuni subsp. jejuni 81-176 4682550 YP_001000808.1 CDS galE NC_008787.1 1066873 1067859 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase complement(1066873..1067859) Campylobacter jejuni subsp. jejuni 81-176 4682923 YP_001000809.1 CDS wlaX NC_008787.1 1067918 1068712 R identified by match to protein family HMM PF03104; polysaccharide biosynthesis protein complement(1067918..1068712) Campylobacter jejuni subsp. jejuni 81-176 4682852 YP_001000810.1 CDS waaC NC_008787.1 1068778 1069806 D identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; lipopolysaccharide heptosyltransferase I 1068778..1069806 Campylobacter jejuni subsp. jejuni 81-176 4682153 YP_001000811.1 CDS waaM NC_008787.1 1069796 1070683 D acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes; lipid A biosynthesis lauroyl acyltransferase 1069796..1070683 Campylobacter jejuni subsp. jejuni 81-176 4683436 YP_001000812.1 CDS CJJ81176_1152 NC_008787.1 1070680 1072227 D identified by match to protein family HMM PF00535; lipooligosaccharide biosynthesis glycosyltransferase, putative 1070680..1072227 Campylobacter jejuni subsp. jejuni 81-176 4683581 YP_001000813.1 CDS CJJ81176_1153 NC_008787.1 1072218 1073399 D galactosyltransferase 1072218..1073399 Campylobacter jejuni subsp. jejuni 81-176 4683097 YP_001000814.1 CDS CJJ81176_1154 NC_008787.1 1073704 1074489 D identified by match to protein family HMM PF06306; beta-1,4-N-acetylgalactosaminyltransferase 1073704..1074489 Campylobacter jejuni subsp. jejuni 81-176 4683323 YP_001000815.1 CDS CJJ81176_1155 NC_008787.1 1074475 1074828 R beta-1,3-galactosyltransferase complement(1074475..1074828) Campylobacter jejuni subsp. jejuni 81-176 4682215 YP_001000816.1 CDS CJJ81176_1156 NC_008787.1 1074836 1075381 R identified by match to protein family HMM PF00535; beta-1,3-galactosyltransferase complement(1074836..1075381) Campylobacter jejuni subsp. jejuni 81-176 4682416 YP_001000817.1 CDS CJJ81176_1157 NC_008787.1 1075470 1076345 D identified by match to protein family HMM PF06002; alpha-2,3-sialyltransferase 1075470..1076345 Campylobacter jejuni subsp. jejuni 81-176 4683333 YP_001000818.1 CDS CJJ81176_1158 NC_008787.1 1076346 1077386 D identified by match to protein family HMM PF01354; match to protein family HMM PF03102; sialic acid synthase 1076346..1077386 Campylobacter jejuni subsp. jejuni 81-176 4683647 YP_001000819.1 CDS CJJ81176_1159 NC_008787.1 1077383 1078507 D identified by match to protein family HMM PF02350; UDP-N-acetylglucosamine 2-epimerase 1077383..1078507 Campylobacter jejuni subsp. jejuni 81-176 4683132 YP_001000820.1 CDS CJJ81176_1160 NC_008787.1 1078500 1079447 D identified by match to protein family HMM PF06306; beta-1,4-N-acetylgalactosaminyltransferase 1078500..1079447 Campylobacter jejuni subsp. jejuni 81-176 4682859 YP_001000821.1 CDS CJJ81176_1161 NC_008787.1 1079444 1080109 D identified by match to protein family HMM PF02348; CMP-Neu5Ac synthetase 1079444..1080109 Campylobacter jejuni subsp. jejuni 81-176 4682960 YP_001000822.1 CDS CJJ81176_1162 NC_008787.1 1080232 1080840 D acetyltransferase 1080232..1080840 Campylobacter jejuni subsp. jejuni 81-176 4682693 YP_001000823.1 CDS waaV NC_008787.1 1080921 1081748 R identified by match to protein family HMM PF00535; lipooligosaccharide biosynthesis glycosyltransferase complement(1080921..1081748) Campylobacter jejuni subsp. jejuni 81-176 4682311 YP_001000824.1 CDS waaF NC_008787.1 1081807 1082760 D identified by match to protein family HMM PF01075; match to protein family HMM TIGR02195; ADP-heptose--LPS heptosyltransferase II 1081807..1082760 Campylobacter jejuni subsp. jejuni 81-176 4682633 YP_001000825.1 CDS CJJ81176_1165 NC_008787.1 1082767 1083522 R identified by match to protein family HMM PF01755; LPS glycosyltransferase subfamily protein complement(1082767..1083522) Campylobacter jejuni subsp. jejuni 81-176 4683357 YP_001000826.1 CDS gmhA-1 NC_008787.1 1083522 1084082 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(1083522..1084082) Campylobacter jejuni subsp. jejuni 81-176 4682698 YP_001000827.1 CDS hldE NC_008787.1 1084079 1085464 R identified by match to protein family HMM PF00294; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02198; match to protein family HMM TIGR02199; D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase complement(1084079..1085464) Campylobacter jejuni subsp. jejuni 81-176 4682723 YP_001000828.1 CDS waaD NC_008787.1 1085457 1086410 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR02197; ADP-L-glycero-D-mannoheptose-6-epimerase complement(1085457..1086410) Campylobacter jejuni subsp. jejuni 81-176 4682277 YP_001000829.1 CDS CJJ81176_1169 NC_008787.1 1086411 1086971 R identified by match to protein family HMM PF08645; match to protein family HMM TIGR00213; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; hydrolase, putative complement(1086411..1086971) Campylobacter jejuni subsp. jejuni 81-176 4683563 YP_001000830.1 CDS cyf NC_008787.1 1087053 1087355 D identified by match to protein family HMM PF00034; cytochrome c553 1087053..1087355 Campylobacter jejuni subsp. jejuni 81-176 4683629 YP_001000831.1 CDS CJJ81176_1171 NC_008787.1 1087378 1087584 R identified by match to protein family HMM PF03597; match to protein family HMM TIGR00847; cytochrome oxidase maturation protein, cbb3-type, putative complement(1087378..1087584) Campylobacter jejuni subsp. jejuni 81-176 4683418 YP_001000832.1 CDS CJJ81176_1172 NC_008787.1 1087581 1089932 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; heavy metal translocating P-type ATPase complement(1087581..1089932) Campylobacter jejuni subsp. jejuni 81-176 4683603 YP_001000833.1 CDS rho NC_008787.1 1090047 1091345 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1090047..1091345 Campylobacter jejuni subsp. jejuni 81-176 4682985 YP_001000834.1 CDS dnaX NC_008787.1 1091349 1092878 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1091349..1092878 Campylobacter jejuni subsp. jejuni 81-176 4683362 YP_001000835.1 CDS CJJ81176_1746 NC_008787.1 1092875 1093396 R hypothetical protein complement(1092875..1093396) Campylobacter jejuni subsp. jejuni 81-176 4683038 YP_001000836.1 CDS CJJ81176_1176 NC_008787.1 1093468 1095567 R identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase complement(1093468..1095567) Campylobacter jejuni subsp. jejuni 81-176 4682558 YP_001000837.1 CDS CJJ81176_1177 NC_008787.1 1095567 1095731 R hypothetical protein complement(1095567..1095731) Campylobacter jejuni subsp. jejuni 81-176 4682270 YP_001000838.1 CDS CJJ81176_1178 NC_008787.1 1095751 1096701 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(1095751..1096701) Campylobacter jejuni subsp. jejuni 81-176 4682764 YP_001000839.1 CDS CJJ81176_1179 NC_008787.1 1096776 1097039 R hypothetical protein complement(1096776..1097039) Campylobacter jejuni subsp. jejuni 81-176 4683699 YP_001000840.1 CDS CJJ81176_1180 NC_008787.1 1097109 1097603 R hypothetical protein complement(1097109..1097603) Campylobacter jejuni subsp. jejuni 81-176 4683783 YP_001000841.1 CDS CJJ81176_1181 NC_008787.1 1097600 1098376 R identified by match to protein family HMM PF06738; hypothetical protein complement(1097600..1098376) Campylobacter jejuni subsp. jejuni 81-176 4683058 YP_001000842.1 CDS ldh NC_008787.1 1098444 1099370 D identified by match to protein family HMM PF00056; match to protein family HMM PF02866; L-lactate dehydrogenase 1098444..1099370 Campylobacter jejuni subsp. jejuni 81-176 4682818 YP_001000843.1 CDS CJJ81176_1183 NC_008787.1 1099367 1099969 R DedA family protein complement(1099367..1099969) Campylobacter jejuni subsp. jejuni 81-176 4682581 YP_001000844.1 CDS CJJ81176_1184 NC_008787.1 1100049 1100276 R hypothetical protein complement(1100049..1100276) Campylobacter jejuni subsp. jejuni 81-176 4682999 YP_001000845.1 CDS CJJ81176_1185 NC_008787.1 1100287 1101687 R hypothetical protein complement(1100287..1101687) Campylobacter jejuni subsp. jejuni 81-176 4683343 YP_001000846.1 CDS ppiB NC_008787.1 1101851 1102333 R identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase B complement(1101851..1102333) Campylobacter jejuni subsp. jejuni 81-176 4683461 YP_001000847.1 CDS CJJ81176_1187 NC_008787.1 1102343 1103050 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(1102343..1103050) Campylobacter jejuni subsp. jejuni 81-176 4682695 YP_001000848.1 CDS CJJ81176_1188 NC_008787.1 1103159 1103500 D identified by match to protein family HMM PF00893; SMR family multidrug efflux pump 1103159..1103500 Campylobacter jejuni subsp. jejuni 81-176 4682605 YP_001000849.1 CDS CJJ81176_1189 NC_008787.1 1103500 1103808 D identified by match to protein family HMM PF00893; SMR family multidrug efflux pump 1103500..1103808 Campylobacter jejuni subsp. jejuni 81-176 4683748 YP_001000850.1 CDS argS NC_008787.1 1103826 1105418 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(1103826..1105418) Campylobacter jejuni subsp. jejuni 81-176 4682898 YP_001000851.1 CDS CJJ81176_1191 NC_008787.1 1105430 1105669 R identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; twin arginine-targeting protein translocase complement(1105430..1105669) Campylobacter jejuni subsp. jejuni 81-176 4683076 YP_001000852.1 CDS gmk NC_008787.1 1105671 1106294 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1105671..1106294) Campylobacter jejuni subsp. jejuni 81-176 4682629 YP_001000853.1 CDS CJJ81176_1193 NC_008787.1 1106291 1107919 R hypothetical protein complement(1106291..1107919) Campylobacter jejuni subsp. jejuni 81-176 4683736 YP_001000854.1 CDS fliR NC_008787.1 1107976 1108743 R FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR complement(1107976..1108743) Campylobacter jejuni subsp. jejuni 81-176 4683183 YP_001000855.1 CDS CJJ81176_1195 NC_008787.1 1108730 1109365 R identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein complement(1108730..1109365) Campylobacter jejuni subsp. jejuni 81-176 4682240 YP_001000856.1 CDS tsf NC_008787.1 1109378 1110451 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1109378..1110451) Campylobacter jejuni subsp. jejuni 81-176 4682876 YP_001000857.1 CDS rpsB NC_008787.1 1110451 1111242 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1110451..1111242) Campylobacter jejuni subsp. jejuni 81-176 4682285 YP_001000858.1 CDS CJJ81176_1198 NC_008787.1 1111358 1112521 R identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase, putative complement(1111358..1112521) Campylobacter jejuni subsp. jejuni 81-176 4682910 YP_001000859.1 CDS petC NC_008787.1 1112649 1113773 R identified by match to protein family HMM PF00034; ubiquinol--cytochrome c reductase, cytochrome c1 subunit complement(1112649..1113773) Campylobacter jejuni subsp. jejuni 81-176 4682386 YP_001000860.1 CDS petB NC_008787.1 1113770 1115020 R identified by match to protein family HMM PF00032; match to protein family HMM PF00033; ubiquinol--cytochrome c reductase, cytochrome b subunit complement(1113770..1115020) Campylobacter jejuni subsp. jejuni 81-176 4683255 YP_001000861.1 CDS petA NC_008787.1 1115022 1115525 R identified by match to protein family HMM PF00355; match to protein family HMM TIGR01416; ubiquinol--cytochrome c reductase, iron-sulfur subunit complement(1115022..1115525) Campylobacter jejuni subsp. jejuni 81-176 4683597 YP_001000862.1 CDS arsB NC_008787.1 1115616 1116902 R identified by match to protein family HMM PF02040; match to protein family HMM PF03600; arsenical pump membrane protein complement(1115616..1116902) Campylobacter jejuni subsp. jejuni 81-176 4683227 YP_001000863.1 CDS gidA NC_008787.1 1116903 1118762 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(1116903..1118762) Campylobacter jejuni subsp. jejuni 81-176 4683444 YP_001000864.1 CDS CJJ81176_1204 NC_008787.1 1118850 1119347 R identified by match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein complement(1118850..1119347) Campylobacter jejuni subsp. jejuni 81-176 4683057 YP_001000865.1 CDS CJJ81176_1205 NC_008787.1 1119365 1120744 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(1119365..1120744) Campylobacter jejuni subsp. jejuni 81-176 4683004 YP_001000866.1 CDS CJJ81176_1206 NC_008787.1 1120865 1121359 R identified by match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein complement(1120865..1121359) Campylobacter jejuni subsp. jejuni 81-176 4683749 YP_001000867.1 CDS dctA NC_008787.1 1121628 1123004 D identified by match to protein family HMM PF00375; C4-dicarboxylate transport protein 1121628..1123004 Campylobacter jejuni subsp. jejuni 81-176 4682445 YP_001000868.1 CDS CJJ81176_1208 NC_008787.1 1123001 1123807 R hypothetical protein complement(1123001..1123807) Campylobacter jejuni subsp. jejuni 81-176 4682828 YP_001000869.1 CDS CJJ81176_1209 NC_008787.1 1123949 1125475 D identified by match to protein family HMM PF01384; phosphate transporter family protein 1123949..1125475 Campylobacter jejuni subsp. jejuni 81-176 4682339 YP_001000870.1 CDS CJJ81176_1210 NC_008787.1 1125483 1126661 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(1125483..1126661) Campylobacter jejuni subsp. jejuni 81-176 4683399 YP_001000871.1 CDS gpsA NC_008787.1 1126671 1127564 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1126671..1127564) Campylobacter jejuni subsp. jejuni 81-176 4683527 YP_001000872.1 CDS gatB NC_008787.1 1127564 1128982 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1127564..1128982) Campylobacter jejuni subsp. jejuni 81-176 4683338 YP_001000873.1 CDS luxS NC_008787.1 1129097 1129591 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1129097..1129591 Campylobacter jejuni subsp. jejuni 81-176 4683564 YP_001000874.1 CDS CJJ81176_1214 NC_008787.1 1129903 1130895 D identified by match to protein family HMM PF03171; 2OG-Fe(II) oxygenase family oxidoreductase 1129903..1130895 Campylobacter jejuni subsp. jejuni 81-176 4683131 YP_001000875.1 CDS CJJ81176_1215 NC_008787.1 1130888 1131676 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1130888..1131676 Campylobacter jejuni subsp. jejuni 81-176 4682651 YP_001000876.1 CDS metE NC_008787.1 1131688 1133952 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 1131688..1133952 Campylobacter jejuni subsp. jejuni 81-176 4682274 YP_001000877.1 CDS metF NC_008787.1 1133962 1134810 D identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; 5,10-methylenetetrahydrofolate reductase 1133962..1134810 Campylobacter jejuni subsp. jejuni 81-176 4682700 YP_001000878.1 CDS CJJ81176_1218 NC_008787.1 1134832 1134978 R hypothetical protein complement(1134832..1134978) Campylobacter jejuni subsp. jejuni 81-176 4683622 YP_001000879.1 CDS atpB NC_008787.1 1135020 1135700 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(1135020..1135700) Campylobacter jejuni subsp. jejuni 81-176 4682168 YP_001000880.1 CDS radA NC_008787.1 1135769 1137109 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(1135769..1137109) Campylobacter jejuni subsp. jejuni 81-176 4683606 YP_001000881.1 CDS ftsY NC_008787.1 1137109 1137975 R identified by match to protein family HMM PF00448; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY complement(1137109..1137975) Campylobacter jejuni subsp. jejuni 81-176 4683106 YP_001000882.1 CDS CJJ81176_1222 NC_008787.1 1137975 1138532 R putative lipoprotein complement(1137975..1138532) Campylobacter jejuni subsp. jejuni 81-176 4683054 YP_001000883.1 CDS CJJ81176_1747 NC_008787.1 1138557 1138682 R hypothetical protein complement(1138557..1138682) Campylobacter jejuni subsp. jejuni 81-176 4682430 YP_001000884.1 CDS CJJ81176_1223 NC_008787.1 1139162 1140715 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1139162..1140715 Campylobacter jejuni subsp. jejuni 81-176 4682904 YP_001000885.1 CDS CJJ81176_1224 NC_008787.1 1140724 1141281 D DedA family protein 1140724..1141281 Campylobacter jejuni subsp. jejuni 81-176 4682618 YP_001000886.1 CDS yihY NC_008787.1 1142484 1143290 R identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; YihY family protein complement(1142484..1143290) Campylobacter jejuni subsp. jejuni 81-176 4683158 YP_001000887.1 CDS glcD NC_008787.1 1143294 1144676 R identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase, subunit GlcD complement(1143294..1144676) Campylobacter jejuni subsp. jejuni 81-176 4683231 YP_001000888.1 CDS CJJ81176_1227 NC_008787.1 1144679 1145389 R hypothetical protein complement(1144679..1145389) Campylobacter jejuni subsp. jejuni 81-176 4683406 YP_001000889.1 CDS CJJ81176_1228 NC_008787.1 1145526 1146686 D identified by match to protein family HMM PF01551; M24/M37 family peptidase 1145526..1146686 Campylobacter jejuni subsp. jejuni 81-176 4683007 YP_001000890.1 CDS CJJ81176_1229 NC_008787.1 1146683 1146886 R hypothetical protein complement(1146683..1146886) Campylobacter jejuni subsp. jejuni 81-176 4683642 YP_001000891.1 CDS CJJ81176_1230 NC_008787.1 1146888 1147568 R identified by match to protein family HMM PF02578; hypothetical protein complement(1146888..1147568) Campylobacter jejuni subsp. jejuni 81-176 4682325 YP_001000892.1 CDS ribE NC_008787.1 1147532 1148143 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(1147532..1148143) Campylobacter jejuni subsp. jejuni 81-176 4683638 YP_001000893.1 CDS CJJ81176_1232 NC_008787.1 1148152 1150692 R hypothetical protein complement(1148152..1150692) Campylobacter jejuni subsp. jejuni 81-176 4683372 YP_001000894.1 CDS groES NC_008787.1 1150854 1151114 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1150854..1151114 Campylobacter jejuni subsp. jejuni 81-176 4683504 YP_001000895.1 CDS groEL NC_008787.1 1151136 1152773 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1151136..1152773 Campylobacter jejuni subsp. jejuni 81-176 4683390 YP_001000896.1 CDS CJJ81176_1235 NC_008787.1 1152816 1153877 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1152816..1153877) Campylobacter jejuni subsp. jejuni 81-176 4682120 YP_001000897.1 CDS CJJ81176_1236 NC_008787.1 1153999 1154664 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(1153999..1154664) Campylobacter jejuni subsp. jejuni 81-176 4682891 YP_001000898.1 CDS CJJ81176_1237 NC_008787.1 1154812 1155411 D identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hemerythrin family non-heme iron protein 1154812..1155411 Campylobacter jejuni subsp. jejuni 81-176 4682839 YP_001000899.1 CDS CJJ81176_1238 NC_008787.1 1155422 1155670 D hypothetical protein 1155422..1155670 Campylobacter jejuni subsp. jejuni 81-176 4682148 YP_001000900.1 CDS CJJ81176_1240 NC_008787.1 1155928 1157100 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(1155928..1157100) Campylobacter jejuni subsp. jejuni 81-176 4682470 YP_001000901.1 CDS CJJ81176_1241 NC_008787.1 1157172 1157846 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(1157172..1157846) Campylobacter jejuni subsp. jejuni 81-176 4683049 YP_001000902.1 CDS htrA NC_008787.1 1157922 1159340 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; protease DO complement(1157922..1159340) Campylobacter jejuni subsp. jejuni 81-176 4683626 YP_001000903.1 CDS dnaJ-1 NC_008787.1 1159541 1160434 D identified by match to protein family HMM PF00226; match to protein family HMM PF01556; co-chaperone protein DnaJ 1159541..1160434 Campylobacter jejuni subsp. jejuni 81-176 4683232 YP_001000904.1 CDS CJJ81176_1244 NC_008787.1 1160450 1160824 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1160450..1160824 Campylobacter jejuni subsp. jejuni 81-176 4682747 YP_001000905.1 CDS CJJ81176_1245 NC_008787.1 1160831 1162456 D identified by match to protein family HMM PF00999; match to protein family HMM PF02254; sodium/hydrogen exchanger family protein 1160831..1162456 Campylobacter jejuni subsp. jejuni 81-176 4682561 YP_001000906.1 CDS CJJ81176_1246 NC_008787.1 1162466 1162798 D hypothetical protein 1162466..1162798 Campylobacter jejuni subsp. jejuni 81-176 4682968 YP_001000907.1 CDS CJJ81176_1247 NC_008787.1 1162795 1163415 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; HAD-superfamily hydrolase, subfamily IA, variant 1 family protein 1162795..1163415 Campylobacter jejuni subsp. jejuni 81-176 4682103 YP_001000908.1 CDS glyS NC_008787.1 1163471 1165465 D glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1163471..1165465 Campylobacter jejuni subsp. jejuni 81-176 4683047 YP_001000909.1 CDS CJJ81176_1249 NC_008787.1 1165549 1166283 D identified by match to protein family HMM PF01551; M24/M37 family peptidase 1165549..1166283 Campylobacter jejuni subsp. jejuni 81-176 4682776 YP_001000910.1 CDS CJJ81176_1250 NC_008787.1 1166280 1167230 D identified by match to protein family HMM PF02636; hypothetical protein 1166280..1167230 Campylobacter jejuni subsp. jejuni 81-176 4682844 YP_001000911.1 CDS CJJ81176_1251 NC_008787.1 1167227 1168201 R identified by match to protein family HMM PF02541; Ppx/GppA family phosphatase complement(1167227..1168201) Campylobacter jejuni subsp. jejuni 81-176 4683345 YP_001000912.1 CDS pdxJ NC_008787.1 1168257 1169045 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1168257..1169045 Campylobacter jejuni subsp. jejuni 81-176 4683569 YP_001000913.1 CDS pdxA NC_008787.1 1169026 1170120 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1169026..1170120 Campylobacter jejuni subsp. jejuni 81-176 4682344 YP_001000914.1 CDS CJJ81176_1254 NC_008787.1 1170098 1170421 R hypothetical protein complement(1170098..1170421) Campylobacter jejuni subsp. jejuni 81-176 4682538 YP_001000915.1 CDS CJJ81176_1255 NC_008787.1 1170482 1170679 R putative periplasmic protein complement(1170482..1170679) Campylobacter jejuni subsp. jejuni 81-176 4683119 YP_001000916.1 CDS CJJ81176_1256 NC_008787.1 1170823 1172022 D identified by match to protein family HMM PF07690; transporter, putative 1170823..1172022 Campylobacter jejuni subsp. jejuni 81-176 4683478 YP_001000917.1 CDS CJJ81176_1257 NC_008787.1 1172078 1172398 D hypothetical protein 1172078..1172398 Campylobacter jejuni subsp. jejuni 81-176 4683367 YP_001000918.1 CDS hemE NC_008787.1 1172578 1173600 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1172578..1173600 Campylobacter jejuni subsp. jejuni 81-176 4682220 YP_001000919.1 CDS CJJ81176_1259 NC_008787.1 1173597 1174499 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1173597..1174499 Campylobacter jejuni subsp. jejuni 81-176 4682518 YP_001000920.1 CDS CJJ81176_1260 NC_008787.1 1174496 1175692 R hypothetical protein complement(1174496..1175692) Campylobacter jejuni subsp. jejuni 81-176 4683261 YP_001000921.1 CDS uvrC NC_008787.1 1175694 1177496 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(1175694..1177496) Campylobacter jejuni subsp. jejuni 81-176 4682477 YP_001000922.1 CDS CJJ81176_1262 NC_008787.1 1177489 1177983 R hypothetical protein complement(1177489..1177983) Campylobacter jejuni subsp. jejuni 81-176 4683366 YP_001000923.1 CDS CJJ81176_1263 NC_008787.1 1177987 1178118 D hypothetical protein 1177987..1178118 Campylobacter jejuni subsp. jejuni 81-176 4683460 YP_001000924.1 CDS guaA NC_008787.1 1178122 1179657 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1178122..1179657 Campylobacter jejuni subsp. jejuni 81-176 4683567 YP_001000925.1 CDS CJJ81176_1265 NC_008787.1 1179743 1181203 D hypothetical protein 1179743..1181203 Campylobacter jejuni subsp. jejuni 81-176 4682410 YP_001000926.1 CDS purD NC_008787.1 1181443 1182693 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1181443..1182693 Campylobacter jejuni subsp. jejuni 81-176 4682619 YP_001000927.1 CDS CJJ81176_1267 NC_008787.1 1182690 1183142 D identified by match to protein family HMM PF06271; hypothetical protein 1182690..1183142 Campylobacter jejuni subsp. jejuni 81-176 4683187 YP_001000928.1 CDS CJJ81176_1268 NC_008787.1 1183153 1185180 D identified by match to protein family HMM PF04453; organic solvent tolerance protein, putative 1183153..1185180 Campylobacter jejuni subsp. jejuni 81-176 4682887 YP_001000929.1 CDS pnp NC_008787.1 1185250 1187409 D identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase 1185250..1187409 Campylobacter jejuni subsp. jejuni 81-176 4682679 YP_001000930.1 CDS CJJ81176_1270 NC_008787.1 1187406 1187888 D identified by match to protein family HMM PF03167; hypothetical protein 1187406..1187888 Campylobacter jejuni subsp. jejuni 81-176 4682994 YP_001000931.1 CDS CJJ81176_1271 NC_008787.1 1187946 1188155 D identified by match to protein family HMM PF01361; match to protein family HMM TIGR00013; hypothetical protein 1187946..1188155 Campylobacter jejuni subsp. jejuni 81-176 4683266 YP_001000932.1 CDS CJJ81176_1272 NC_008787.1 1188152 1188814 R hypothetical protein complement(1188152..1188814) Campylobacter jejuni subsp. jejuni 81-176 4683440 YP_001000933.1 CDS CJJ81176_1273 NC_008787.1 1188832 1190016 R identified by match to protein family HMM PF07690; multidrug resistance efflux transporter, authentic frameshift complement(1188832..1190016) Campylobacter jejuni subsp. jejuni 81-176 4683351 YP_001000934.1 CDS CJJ81176_1274 NC_008787.1 1190070 1190525 D identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase family protein 1190070..1190525 Campylobacter jejuni subsp. jejuni 81-176 4682762 YP_001000935.1 CDS porA NC_008787.1 1190777 1192051 D identified by match to protein family HMM PF05538; major outer membrane protein 1190777..1192051 Campylobacter jejuni subsp. jejuni 81-176 4683701 YP_001000936.1 CDS dnaJ-2 NC_008787.1 1192166 1193290 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(1192166..1193290) Campylobacter jejuni subsp. jejuni 81-176 4683708 YP_001000937.1 CDS racR NC_008787.1 1193447 1194118 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1193447..1194118 Campylobacter jejuni subsp. jejuni 81-176 4682254 YP_001000938.1 CDS racS NC_008787.1 1194175 1195350 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1194175..1195350 Campylobacter jejuni subsp. jejuni 81-176 4682906 YP_001000939.1 CDS recR NC_008787.1 1195350 1195922 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1195350..1195922 Campylobacter jejuni subsp. jejuni 81-176 4682534 YP_001000940.1 CDS hydD NC_008787.1 1195919 1196455 R identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072; hydrogenase maturation protease HydD complement(1195919..1196455) Campylobacter jejuni subsp. jejuni 81-176 4683143 YP_001000941.1 CDS hydC NC_008787.1 1196452 1197168 R identified by match to protein family HMM PF01292; match to protein family HMM TIGR02125; quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit complement(1196452..1197168) Campylobacter jejuni subsp. jejuni 81-176 4683769 YP_001000942.1 CDS hydB NC_008787.1 1197155 1198870 R identified by match to protein family HMM PF00374; quinone-reactive Ni/Fe-hydrogenase, large subunit complement(1197155..1198870) Campylobacter jejuni subsp. jejuni 81-176 4683425 YP_001000943.1 CDS hydA NC_008787.1 1198873 1199955 R identified by match to protein family HMM PF01058; match to protein family HMM PF08425; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409; quinone-reactive Ni/Fe-hydrogenase, small subunit complement(1198873..1199955) Campylobacter jejuni subsp. jejuni 81-176 4683505 YP_001000944.1 CDS mnmC NC_008787.1 1200132 1201973 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(1200132..1201973) Campylobacter jejuni subsp. jejuni 81-176 4682848 YP_001000945.1 CDS CJJ81176_1285 NC_008787.1 1201970 1203949 R identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase complement(1201970..1203949) Campylobacter jejuni subsp. jejuni 81-176 4682242 YP_001000946.1 CDS CJJ81176_1286 NC_008787.1 1203949 1205040 R identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase family oxidoreductase complement(1203949..1205040) Campylobacter jejuni subsp. jejuni 81-176 4682352 YP_001000947.1 CDS tyrS NC_008787.1 1205037 1206242 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(1205037..1206242) Campylobacter jejuni subsp. jejuni 81-176 4682239 YP_001000948.1 CDS CJJ81176_1288 NC_008787.1 1206254 1208425 R identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; RelA/SpoT family protein complement(1206254..1208425) Campylobacter jejuni subsp. jejuni 81-176 4682897 YP_001000949.1 CDS rpoZ NC_008787.1 1208433 1208657 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(1208433..1208657) Campylobacter jejuni subsp. jejuni 81-176 4682590 YP_001000950.1 CDS pyrH NC_008787.1 1208668 1209387 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(1208668..1209387) Campylobacter jejuni subsp. jejuni 81-176 4683198 YP_001000951.1 CDS CJJ81176_1291 NC_008787.1 1209439 1210632 R identified by match to protein family HMM PF01551; M24/M37 family peptidase complement(1209439..1210632) Campylobacter jejuni subsp. jejuni 81-176 4683157 YP_001000952.1 CDS CJJ81176_1292 NC_008787.1 1210629 1211387 R cell division protein FtsX, putative complement(1210629..1211387) Campylobacter jejuni subsp. jejuni 81-176 4682622 YP_001000953.1 CDS lolD NC_008787.1 1211422 1212087 R identified by match to protein family HMM PF00005; lipoprotein releasing system ATP-binding protein LolD complement(1211422..1212087) Campylobacter jejuni subsp. jejuni 81-176 4682850 YP_001000954.1 CDS trmB NC_008787.1 1212157 1213335 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1212157..1213335) Campylobacter jejuni subsp. jejuni 81-176 4682515 YP_001000955.1 CDS CJJ81176_1295 NC_008787.1 1213335 1214567 R identified by match to protein family HMM PF00041; fibronectin type III domain-containing protein complement(1213335..1214567) Campylobacter jejuni subsp. jejuni 81-176 4683528 YP_001000956.1 CDS CJJ81176_1296 NC_008787.1 1214515 1215483 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase A complement(1214515..1215483) Campylobacter jejuni subsp. jejuni 81-176 4682100 YP_001000957.1 CDS CJJ81176_1297 NC_008787.1 1215561 1216661 D identified by match to protein family HMM PF01098; rod shape-determining protein RodA, putative 1215561..1216661 Campylobacter jejuni subsp. jejuni 81-176 4682775 YP_001000958.1 CDS CJJ81176_1300 NC_008787.1 1217115 1218458 D identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933; TrkH family potassium uptake protein 1217115..1218458 Campylobacter jejuni subsp. jejuni 81-176 4683729 YP_001000959.1 CDS CJJ81176_1301 NC_008787.1 1218469 1219119 D identified by match to protein family HMM PF02080; match to protein family HMM PF02254; potassium uptake protein TrkA, putative 1218469..1219119 Campylobacter jejuni subsp. jejuni 81-176 4683389 YP_001000960.1 CDS CJJ81176_1302 NC_008787.1 1219116 1219787 R identified by match to protein family HMM PF02621; hypothetical protein complement(1219116..1219787) Campylobacter jejuni subsp. jejuni 81-176 4683746 YP_001000961.1 CDS upp NC_008787.1 1219793 1220419 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(1219793..1220419) Campylobacter jejuni subsp. jejuni 81-176 4682485 YP_001000962.1 CDS CJJ81176_1304 NC_008787.1 1220416 1221651 R identified by match to protein family HMM PF00390; match to protein family HMM PF03949; NADP-dependent malic enzyme, truncation complement(1220416..1221651) Campylobacter jejuni subsp. jejuni 81-176 4683451 YP_001000963.1 CDS gltX NC_008787.1 1221653 1223044 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(1221653..1223044) Campylobacter jejuni subsp. jejuni 81-176 4683248 YP_001000964.1 CDS CJJ81176_1306 NC_008787.1 1223109 1223924 D hypothetical protein 1223109..1223924 Campylobacter jejuni subsp. jejuni 81-176 4683531 YP_001000965.1 CDS accC-2 NC_008787.1 1223962 1225293 R biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase complement(1223962..1225293) Campylobacter jejuni subsp. jejuni 81-176 4683344 YP_001000966.1 CDS accB NC_008787.1 1225295 1225750 R identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(1225295..1225750) Campylobacter jejuni subsp. jejuni 81-176 4682166 YP_001000967.1 CDS dcd NC_008787.1 1225898 1226458 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1225898..1226458 Campylobacter jejuni subsp. jejuni 81-176 4683020 YP_001000968.1 CDS flmA NC_008787.1 1226507 1227511 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; polysaccharide biosynthesis protein 1226507..1227511 Campylobacter jejuni subsp. jejuni 81-176 4683631 YP_001000969.1 CDS CJJ81176_1311 NC_008787.1 1227512 1228642 D identified by match to protein family HMM PF01041; match to protein family HMM PF01212; aminotransferase 1227512..1228642 Campylobacter jejuni subsp. jejuni 81-176 4682420 YP_001000970.1 CDS CJJ81176_1312 NC_008787.1 1228635 1229393 D hypothetical protein 1228635..1229393 Campylobacter jejuni subsp. jejuni 81-176 4682105 YP_001000971.1 CDS CJJ81176_1313 NC_008787.1 1229404 1229943 D hypothetical protein 1229404..1229943 Campylobacter jejuni subsp. jejuni 81-176 4682176 YP_001000972.1 CDS CJJ81176_1314 NC_008787.1 1229938 1230834 R hypothetical protein complement(1229938..1230834) Campylobacter jejuni subsp. jejuni 81-176 4682981 YP_001000973.1 CDS CJJ81176_1315 NC_008787.1 1230977 1231696 D hypothetical protein 1230977..1231696 Campylobacter jejuni subsp. jejuni 81-176 4682827 YP_001000974.1 CDS CJJ81176_1316 NC_008787.1 1231701 1231928 D hypothetical protein 1231701..1231928 Campylobacter jejuni subsp. jejuni 81-176 4682351 YP_001000975.1 CDS CJJ81176_1317 NC_008787.1 1231921 1233279 D hypothetical protein 1231921..1233279 Campylobacter jejuni subsp. jejuni 81-176 4683185 YP_001000976.1 CDS CJJ81176_1318 NC_008787.1 1233276 1234838 D identified by match to protein family HMM TIGR01681; match to protein family HMM TIGR01686; HAD family phosphatase 1233276..1234838 Campylobacter jejuni subsp. jejuni 81-176 4683235 YP_001000977.1 CDS CJJ81176_1319 NC_008787.1 1234828 1235889 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; paralogs which do not contain the N-X-R ACP-binding site motif; 3-oxoacyl-(acyl carrier protein) synthase III 1234828..1235889 Campylobacter jejuni subsp. jejuni 81-176 4683429 YP_001000978.1 CDS CJJ81176_1320 NC_008787.1 1235889 1236110 D acyl carrier protein, putative 1235889..1236110 Campylobacter jejuni subsp. jejuni 81-176 4683513 YP_001000979.1 CDS CJJ81176_1321 NC_008787.1 1236124 1236702 R hypothetical protein complement(1236124..1236702) Campylobacter jejuni subsp. jejuni 81-176 4683635 YP_001000980.1 CDS CJJ81176_1322 NC_008787.1 1237399 1238910 D identified by match to protein family HMM PF00501; amino acid adenylation domain-containing protein 1237399..1238910 Campylobacter jejuni subsp. jejuni 81-176 4682614 YP_001000981.1 CDS CJJ81176_1323 NC_008787.1 1239050 1239622 D identified by match to protein family HMM PF00583; acetyltransferase 1239050..1239622 Campylobacter jejuni subsp. jejuni 81-176 4682730 YP_001000982.1 CDS CJJ81176_1324 NC_008787.1 1239639 1239812 R hypothetical protein complement(1239639..1239812) Campylobacter jejuni subsp. jejuni 81-176 4682560 YP_001000983.1 CDS CJJ81176_1325 NC_008787.1 1239899 1240309 D formyl transferase domain-containing protein 1239899..1240309 Campylobacter jejuni subsp. jejuni 81-176 4682851 YP_001000984.1 CDS CJJ81176_1326 NC_008787.1 1240312 1240536 D acyl carrier protein, putative 1240312..1240536 Campylobacter jejuni subsp. jejuni 81-176 4683134 YP_001000985.1 CDS CJJ81176_1327 NC_008787.1 1240529 1241740 R hypothetical protein complement(1240529..1241740) Campylobacter jejuni subsp. jejuni 81-176 4682434 YP_001000986.1 CDS neuA NC_008787.1 1241832 1242530 D identified by match to protein family HMM PF00483; match to protein family HMM PF02348; acylneuraminate cytidylyltransferase 1241832..1242530 Campylobacter jejuni subsp. jejuni 81-176 4683584 YP_001000987.1 CDS CJJ81176_1329 NC_008787.1 1242514 1243338 D flagellar protein, putative 1242514..1243338 Campylobacter jejuni subsp. jejuni 81-176 4683251 YP_001000988.1 CDS CJJ81176_1330 NC_008787.1 1243335 1243808 D identified by match to protein family HMM PF00583; acetyltransferase 1243335..1243808 Campylobacter jejuni subsp. jejuni 81-176 4682272 YP_001000989.1 CDS hisF-1 NC_008787.1 1243773 1244519 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamide and glutamine to imidazole-glycerolphosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(1243773..1244519) Campylobacter jejuni subsp. jejuni 81-176 4683628 YP_001000990.1 CDS hisH NC_008787.1 1244520 1245125 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(1244520..1245125) Campylobacter jejuni subsp. jejuni 81-176 4682930 YP_001000991.1 CDS CJJ81176_1333 NC_008787.1 1245122 1246258 R flagellin modification protein, PseA complement(1245122..1246258) Campylobacter jejuni subsp. jejuni 81-176 4683449 YP_001000992.1 CDS neuB NC_008787.1 1246516 1247547 D identified by match to protein family HMM PF01354; match to protein family HMM PF03102; N-acetylneuraminic acid synthetase 1246516..1247547 Campylobacter jejuni subsp. jejuni 81-176 4682154 YP_001000993.1 CDS CJJ81176_1335 NC_008787.1 1247580 1249394 D identified by match to protein family HMM PF01973; motility accessory factor 1247580..1249394 Campylobacter jejuni subsp. jejuni 81-176 4682746 YP_001000994.1 CDS CJJ81176_1336 NC_008787.1 1249415 1251379 D identified by match to protein family HMM PF01973; PseD 1249415..1251379 Campylobacter jejuni subsp. jejuni 81-176 4683243 YP_001000995.1 CDS CJJ81176_1337 NC_008787.1 1251366 1253264 D identified by match to protein family HMM PF01973; PseE 1251366..1253264 Campylobacter jejuni subsp. jejuni 81-176 4683519 YP_001000996.1 CDS CJJ81176_1338 NC_008787.1 1253296 1255026 R FlaB; structural flagella protein; in Helicobacter the flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin complement(1253296..1255026) Campylobacter jejuni subsp. jejuni 81-176 4682956 YP_001000997.1 CDS CJJ81176_1339 NC_008787.1 1255200 1256930 R FlaA; structural flagella protein; in Helicobacter the flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin complement(1255200..1256930) Campylobacter jejuni subsp. jejuni 81-176 4682159 YP_001000998.1 CDS CJJ81176_1340 NC_008787.1 1257013 1258839 R identified by match to protein family HMM PF01973; motility accessory factor complement(1257013..1258839) Campylobacter jejuni subsp. jejuni 81-176 4683084 YP_001000999.1 CDS CJJ81176_1341 NC_008787.1 1258851 1260101 R hypothetical protein complement(1258851..1260101) Campylobacter jejuni subsp. jejuni 81-176 4682705 YP_001001000.1 CDS ctsG NC_008787.1 1260101 1260616 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; transformation system protein complement(1260101..1260616) Campylobacter jejuni subsp. jejuni 81-176 4683281 YP_001001001.1 CDS gcp NC_008787.1 1260617 1261624 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(1260617..1261624) Campylobacter jejuni subsp. jejuni 81-176 4683073 YP_001001002.1 CDS CJJ81176_1344 NC_008787.1 1261621 1263015 R hypothetical protein complement(1261621..1263015) Campylobacter jejuni subsp. jejuni 81-176 4683516 YP_001001003.1 CDS dxr NC_008787.1 1263017 1264087 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1263017..1264087) Campylobacter jejuni subsp. jejuni 81-176 4682792 YP_001001004.1 CDS cdsA NC_008787.1 1264084 1264809 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(1264084..1264809) Campylobacter jejuni subsp. jejuni 81-176 4682207 YP_001001005.1 CDS CJJ81176_1347 NC_008787.1 1264818 1265156 R hypothetical protein complement(1264818..1265156) Campylobacter jejuni subsp. jejuni 81-176 4683320 YP_001001006.1 CDS CJJ81176_1348 NC_008787.1 1265158 1266465 R identified by match to protein family HMM PF05670; fibronectin/fibrinogen binding protein, putative complement(1265158..1266465) Campylobacter jejuni subsp. jejuni 81-176 4682502 YP_001001007.1 CDS CJJ81176_1349 NC_008787.1 1266527 1267102 D putative molybdopterin-guanine dinucleotide biosynthesis protein 1266527..1267102 Campylobacter jejuni subsp. jejuni 81-176 4683554 YP_001001008.1 CDS pldA NC_008787.1 1267099 1268088 D identified by match to protein family HMM PF02253; phospholipase A 1267099..1268088 Campylobacter jejuni subsp. jejuni 81-176 4682765 YP_001001009.1 CDS ceuB NC_008787.1 1268177 1269145 D identified by match to protein family HMM PF01032; enterochelin ABC transporter, permease protein 1268177..1269145 Campylobacter jejuni subsp. jejuni 81-176 4682825 YP_001001010.1 CDS ceuC NC_008787.1 1269138 1270076 D identified by match to protein family HMM PF01032; enterochelin ABC transporter, permease protein 1269138..1270076 Campylobacter jejuni subsp. jejuni 81-176 4683374 YP_001001011.1 CDS ceuD NC_008787.1 1270073 1270828 D identified by match to protein family HMM PF00005; enterochelin ABC transporter, ATP-binding protein 1270073..1270828 Campylobacter jejuni subsp. jejuni 81-176 4682223 YP_001001012.1 CDS CJJ81176_1354 NC_008787.1 1270841 1271833 D identified by match to protein family HMM PF01497; enterochelin ABC transporter, periplasmic enterochelin-binding protein, authentic frameshift 1270841..1271833 Campylobacter jejuni subsp. jejuni 81-176 4683229 YP_001001013.1 CDS CJJ81176_1355 NC_008787.1 1271987 1272208 D hypothetical protein 1271987..1272208 Campylobacter jejuni subsp. jejuni 81-176 4682512 YP_001001014.1 CDS CJJ81176_1356 NC_008787.1 1272209 1272490 D identified by match to protein family HMM PF05016; RelE/ParE family plasmid stabilization system protein 1272209..1272490 Campylobacter jejuni subsp. jejuni 81-176 4683045 YP_001001015.1 CDS CJJ81176_1358 NC_008787.1 1272850 1273404 R hypothetical protein complement(1272850..1273404) Campylobacter jejuni subsp. jejuni 81-176 4682429 YP_001001016.1 CDS nrfA NC_008787.1 1273540 1275372 R identified by match to protein family HMM PF02335; cytochrome c552 complement(1273540..1275372) Campylobacter jejuni subsp. jejuni 81-176 4683776 YP_001001017.1 CDS nrfH NC_008787.1 1275387 1275902 R identified by match to protein family HMM PF03264; match to protein family HMM TIGR03153; cytochrome c-type protein nrfH complement(1275387..1275902) Campylobacter jejuni subsp. jejuni 81-176 4683709 YP_001001018.1 CDS ppk NC_008787.1 1276090 1278174 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1276090..1278174 Campylobacter jejuni subsp. jejuni 81-176 4682449 YP_001001019.1 CDS CJJ81176_1363 NC_008787.1 1278618 1279070 R hypothetical protein complement(1278618..1279070) Campylobacter jejuni subsp. jejuni 81-176 4683778 YP_001001020.1 CDS ruvB NC_008787.1 1279119 1280126 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1279119..1280126 Campylobacter jejuni subsp. jejuni 81-176 4682374 YP_001001021.1 CDS CJJ81176_1365 NC_008787.1 1280130 1281173 D identified by match to protein family HMM PF01594; hypothetical protein 1280130..1281173 Campylobacter jejuni subsp. jejuni 81-176 4683732 YP_001001022.1 CDS fumC NC_008787.1 1281203 1282594 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(1281203..1282594) Campylobacter jejuni subsp. jejuni 81-176 4683712 YP_001001023.1 CDS CJJ81176_1367 NC_008787.1 1282650 1285775 R identified by match to protein family HMM PF00082; match to protein family HMM PF03797; match to protein family HMM TIGR02601; serine protease complement(1282650..1285775) Campylobacter jejuni subsp. jejuni 81-176 4683250 YP_001001024.1 CDS glmS NC_008787.1 1285778 1287574 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(1285778..1287574) Campylobacter jejuni subsp. jejuni 81-176 4682820 YP_001001025.1 CDS CJJ81176_1369 NC_008787.1 1287579 1289927 R GlnD family protein complement(1287579..1289927) Campylobacter jejuni subsp. jejuni 81-176 4683053 YP_001001026.1 CDS CJJ81176_1370 NC_008787.1 1290071 1291135 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; hypothetical protein 1290071..1291135 Campylobacter jejuni subsp. jejuni 81-176 4683405 YP_001001027.1 CDS CJJ81176_1371 NC_008787.1 1291197 1294562 D identified by match to protein family HMM PF00082; match to protein family HMM PF03797; match to protein family HMM TIGR01414; match to protein family HMM TIGR02601; serine protease 1291197..1294562 Campylobacter jejuni subsp. jejuni 81-176 4682857 YP_001001028.1 CDS CJJ81176_1372 NC_008787.1 1294609 1295928 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease family protein 1294609..1295928 Campylobacter jejuni subsp. jejuni 81-176 4682448 YP_001001029.1 CDS CJJ81176_1373 NC_008787.1 1295942 1296385 D identified by match to protein family HMM PF00156; putative nucleotide phosphoribosyltransferase 1295942..1296385 Campylobacter jejuni subsp. jejuni 81-176 4682531 YP_001001030.1 CDS CJJ81176_1374 NC_008787.1 1296430 1297128 D identified by match to protein family HMM PF04333; VacJ family lipoprotein 1296430..1297128 Campylobacter jejuni subsp. jejuni 81-176 4682875 YP_001001031.1 CDS CJJ81176_1375 NC_008787.1 1297138 1297707 D identified by match to protein family HMM PF05494; toluene tolerance protein, putative 1297138..1297707 Campylobacter jejuni subsp. jejuni 81-176 4683575 YP_001001032.1 CDS CJJ81176_1376 NC_008787.1 1297707 1300178 D identified by match to protein family HMM PF02460; hypothetical protein 1297707..1300178 Campylobacter jejuni subsp. jejuni 81-176 4683006 YP_001001033.1 CDS CJJ81176_1377 NC_008787.1 1300209 1300811 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase complement(1300209..1300811) Campylobacter jejuni subsp. jejuni 81-176 4683009 YP_001001034.1 CDS CJJ81176_1378 NC_008787.1 1300978 1302279 D identified by match to protein family HMM PF07690; multidrug resistance efflux transporter, putative 1300978..1302279 Campylobacter jejuni subsp. jejuni 81-176 4683485 YP_001001035.1 CDS CJJ81176_1379 NC_008787.1 1302282 1303955 R identified by match to protein family HMM PF00037; iron-sulfur cluster-binding domain-containing protein complement(1302282..1303955) Campylobacter jejuni subsp. jejuni 81-176 4683428 YP_001001036.1 CDS selA NC_008787.1 1304033 1305355 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 1304033..1305355 Campylobacter jejuni subsp. jejuni 81-176 4683510 YP_001001037.1 CDS selB NC_008787.1 1305352 1307157 D identified by match to protein family HMM PF00009; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475; selenocysteine-specific elongation factor 1305352..1307157 Campylobacter jejuni subsp. jejuni 81-176 4683324 YP_001001038.1 CDS CJJ81176_1382 NC_008787.1 1307206 1307916 D hypothetical protein 1307206..1307916 Campylobacter jejuni subsp. jejuni 81-176 4683768 YP_001001039.1 CDS CJJ81176_1383 NC_008787.1 1307922 1308473 D putative lipoprotein 1307922..1308473 Campylobacter jejuni subsp. jejuni 81-176 4683113 YP_001001040.1 CDS fldA NC_008787.1 1308496 1308987 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA complement(1308496..1308987) Campylobacter jejuni subsp. jejuni 81-176 4683088 YP_001001041.1 CDS CJJ81176_1385 NC_008787.1 1308987 1309682 R hypothetical protein complement(1308987..1309682) Campylobacter jejuni subsp. jejuni 81-176 4682330 YP_001001042.1 CDS CJJ81176_1386 NC_008787.1 1309685 1309999 R hypothetical protein complement(1309685..1309999) Campylobacter jejuni subsp. jejuni 81-176 4682118 YP_001001043.1 CDS katA NC_008787.1 1310170 1311594 D identified by match to protein family HMM PF00199; catalase 1310170..1311594 Campylobacter jejuni subsp. jejuni 81-176 4682552 YP_001001044.1 CDS CJJ81176_1388 NC_008787.1 1311651 1312121 D identified by match to protein family HMM PF00023; ankyrin repeat-containing protein 1311651..1312121 Campylobacter jejuni subsp. jejuni 81-176 4683342 YP_001001045.1 CDS CJJ81176_1389 NC_008787.1 1312122 1312778 R hypothetical protein complement(1312122..1312778) Campylobacter jejuni subsp. jejuni 81-176 4683586 YP_001001046.1 CDS CJJ81176_1390 NC_008787.1 1312946 1313308 D identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP, putative 1312946..1313308 Campylobacter jejuni subsp. jejuni 81-176 4683734 YP_001001047.1 CDS CJJ81176_1391 NC_008787.1 1313312 1314751 D identified by match to protein family HMM PF03606; match to protein family HMM TIGR00771; cryptic C4-dicarboxylate transporter DcuD, authentic frameshift 1313312..1314751 Campylobacter jejuni subsp. jejuni 81-176 4683078 YP_001001048.1 CDS metC NC_008787.1 1314764 1315927 D identified by match to protein family HMM PF01053; cystathionine beta-lyase 1314764..1315927 Campylobacter jejuni subsp. jejuni 81-176 4683766 YP_001001049.1 CDS purB-2 NC_008787.1 1315937 1317304 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1315937..1317304 Campylobacter jejuni subsp. jejuni 81-176 4683439 YP_001001050.1 CDS CJJ81176_1394 NC_008787.1 1317313 1318653 D identified by match to protein family HMM PF03972; MmgE/PrpD family protein 1317313..1318653 Campylobacter jejuni subsp. jejuni 81-176 4683453 YP_001001051.1 CDS CJJ81176_1395 NC_008787.1 1318846 1318959 D feoA family protein 1318846..1318959 Campylobacter jejuni subsp. jejuni 81-176 4683272 YP_001001052.1 CDS CJJ81176_1396 NC_008787.1 1318956 1319714 D identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650; ferrous iron transport protein B, authentic frameshift 1318956..1319714 Campylobacter jejuni subsp. jejuni 81-176 4683135 YP_001001053.1 CDS feoB NC_008787.1 1319689 1320798 D identified by match to protein family HMM PF07664; match to protein family HMM PF07670; ferrous iron transport protein B 1319689..1320798 Campylobacter jejuni subsp. jejuni 81-176 4683434 YP_001001054.1 CDS CJJ81176_1398 NC_008787.1 1320795 1322288 R identified by match to protein family HMM PF01058; match to protein family HMM TIGR00391; hydrogenase, (NiFe)/(NiFeSe) small subunit family complement(1320795..1322288) Campylobacter jejuni subsp. jejuni 81-176 4682337 YP_001001055.1 CDS fabI NC_008787.1 1322292 1323116 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(1322292..1323116) Campylobacter jejuni subsp. jejuni 81-176 4682889 YP_001001056.1 CDS tpiA NC_008787.1 1323120 1323791 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(1323120..1323791) Campylobacter jejuni subsp. jejuni 81-176 4682527 YP_001001057.1 CDS pgk NC_008787.1 1323788 1324990 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(1323788..1324990) Campylobacter jejuni subsp. jejuni 81-176 4682569 YP_001001058.1 CDS gapA NC_008787.1 1324993 1325991 R identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde 3-phosphate dehydrogenase A complement(1324993..1325991) Campylobacter jejuni subsp. jejuni 81-176 4683253 YP_001001059.1 CDS nadD NC_008787.1 1326051 1326596 D identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate (nicotinamide) nucleotide adenylyltransferase 1326051..1326596 Campylobacter jejuni subsp. jejuni 81-176 4682144 YP_001001060.1 CDS CJJ81176_1404 NC_008787.1 1326624 1326950 D identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; hypothetical protein 1326624..1326950 Campylobacter jejuni subsp. jejuni 81-176 4682731 YP_001001061.1 CDS CJJ81176_1405 NC_008787.1 1326983 1327360 R identified by match to protein family HMM PF06476; hypothetical protein complement(1326983..1327360) Campylobacter jejuni subsp. jejuni 81-176 4683570 YP_001001062.1 CDS algC NC_008787.1 1327407 1328777 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphomannomutase/phosphoglucomutase complement(1327407..1328777) Campylobacter jejuni subsp. jejuni 81-176 4682855 YP_001001063.1 CDS fliL NC_008787.1 1328899 1329435 D interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1328899..1329435 Campylobacter jejuni subsp. jejuni 81-176 4683397 YP_001001064.1 CDS acpS NC_008787.1 1329435 1329782 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1329435..1329782 Campylobacter jejuni subsp. jejuni 81-176 4682970 YP_001001065.1 CDS CJJ81176_1409 NC_008787.1 1329783 1330202 R hypothetical protein complement(1329783..1330202) Campylobacter jejuni subsp. jejuni 81-176 4682328 YP_001001066.1 CDS CJJ81176_1410 NC_008787.1 1330199 1331560 R identified by match to protein family HMM PF00067; cytochrome P450 family protein complement(1330199..1331560) Campylobacter jejuni subsp. jejuni 81-176 4682530 YP_001001067.1 CDS CJJ81176_1411 NC_008787.1 1331557 1332678 R hypothetical protein complement(1331557..1332678) Campylobacter jejuni subsp. jejuni 81-176 4683507 YP_001001068.1 CDS kpsS NC_008787.1 1332750 1333934 R identified by match to protein family HMM PF05159; capsule polysaccharide export protein KpsS complement(1332750..1333934) Campylobacter jejuni subsp. jejuni 81-176 4682675 YP_001001069.1 CDS kpsC NC_008787.1 1333931 1336000 R identified by match to protein family HMM PF05159; capsule polysaccharide export protein KpsC complement(1333931..1336000) Campylobacter jejuni subsp. jejuni 81-176 4683284 YP_001001070.1 CDS CJJ81176_1414 NC_008787.1 1335997 1336509 R converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase complement(1335997..1336509) Campylobacter jejuni subsp. jejuni 81-176 4683612 YP_001001071.1 CDS CJJ81176_1415 NC_008787.1 1336499 1337260 R identified by match to protein family HMM PF00483; putative sugar-1-phosphate nucleotidyltransferase complement(1336499..1337260) Campylobacter jejuni subsp. jejuni 81-176 4683083 YP_001001072.1 CDS CJJ81176_1416 NC_008787.1 1337262 1337864 R identified by match to protein family HMM PF00117; class I glutamine amidotransferase, putative complement(1337262..1337864) Campylobacter jejuni subsp. jejuni 81-176 4682327 YP_001001073.1 CDS CJJ81176_1417 NC_008787.1 1337855 1340194 R hypothetical protein complement(1337855..1340194) Campylobacter jejuni subsp. jejuni 81-176 4682980 YP_001001074.1 CDS CJJ81176_1418 NC_008787.1 1340209 1340988 R identified by match to protein family HMM PF01209; putative methyltransferase complement(1340209..1340988) Campylobacter jejuni subsp. jejuni 81-176 4682293 YP_001001075.1 CDS CJJ81176_1419 NC_008787.1 1341022 1341795 R putative methyltransferase complement(1341022..1341795) Campylobacter jejuni subsp. jejuni 81-176 4683152 YP_001001076.1 CDS CJJ81176_1420 NC_008787.1 1341847 1343541 R putative sugar transferase complement(1341847..1343541) Campylobacter jejuni subsp. jejuni 81-176 4683043 YP_001001077.1 CDS CJJ81176_1421 NC_008787.1 1343513 1343626 R putative glycosyltransferase complement(1343513..1343626) Campylobacter jejuni subsp. jejuni 81-176 4682181 YP_001001078.1 CDS CJJ81176_1422 NC_008787.1 1343639 1344313 R identified by match to protein family HMM PF00483; capsular biosynthesis nucleotidyltransferase, putative complement(1343639..1344313) Campylobacter jejuni subsp. jejuni 81-176 4683316 YP_001001079.1 CDS gmhA-2 NC_008787.1 1344301 1344906 R identified by match to protein family HMM TIGR00441; phosphoheptose isomerase complement(1344301..1344906) Campylobacter jejuni subsp. jejuni 81-176 4682119 YP_001001080.1 CDS CJJ81176_1424 NC_008787.1 1344894 1345913 R identified by match to protein family HMM PF00288; capsular biosynthesis sugar kinase, putative complement(1344894..1345913) Campylobacter jejuni subsp. jejuni 81-176 4683601 YP_001001081.1 CDS CJJ81176_1425 NC_008787.1 1345988 1346926 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; HrEpiB complement(1345988..1346926) Campylobacter jejuni subsp. jejuni 81-176 4683092 YP_001001082.1 CDS wcbK NC_008787.1 1346950 1347984 R identified by match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; GDP-mannose 4,6-dehydratase complement(1346950..1347984) Campylobacter jejuni subsp. jejuni 81-176 4683738 YP_001001083.1 CDS fcl NC_008787.1 1347993 1349051 R identified by match to protein family HMM PF01370; GDP-fucose synthetase complement(1347993..1349051) Campylobacter jejuni subsp. jejuni 81-176 4682946 YP_001001084.1 CDS CJJ81176_1428 NC_008787.1 1349061 1349681 R hypothetical protein complement(1349061..1349681) Campylobacter jejuni subsp. jejuni 81-176 4683426 YP_001001085.1 CDS CJJ81176_1429 NC_008787.1 1349668 1349985 R hypothetical protein complement(1349668..1349985) Campylobacter jejuni subsp. jejuni 81-176 4682843 YP_001001086.1 CDS CJJ81176_1430 NC_008787.1 1349988 1350533 R identified by match to protein family HMM PF00908; putative nucleotide-sugar epimerase-dehydratase complement(1349988..1350533) Campylobacter jejuni subsp. jejuni 81-176 4683260 YP_001001087.1 CDS CJJ81176_1431 NC_008787.1 1350533 1352233 R putative sugar transferase complement(1350533..1352233) Campylobacter jejuni subsp. jejuni 81-176 4682504 YP_001001088.1 CDS CJJ81176_1432 NC_008787.1 1352230 1353939 R identified by match to protein family HMM PF00535; galactosyltransferase complement(1352230..1353939) Campylobacter jejuni subsp. jejuni 81-176 4682942 YP_001001089.1 CDS CJJ81176_1433 NC_008787.1 1353945 1355426 R identified by match to protein family HMM PF00535; putative sugar transferase complement(1353945..1355426) Campylobacter jejuni subsp. jejuni 81-176 4683457 YP_001001090.1 CDS CJJ81176_1434 NC_008787.1 1355432 1356637 R identified by match to protein family HMM PF01501; putative sugar transferase complement(1355432..1356637) Campylobacter jejuni subsp. jejuni 81-176 4682373 YP_001001091.1 CDS CJJ81176_1435 NC_008787.1 1356648 1358459 R putative sugar transferase complement(1356648..1358459) Campylobacter jejuni subsp. jejuni 81-176 4682544 YP_001001092.1 CDS CJJ81176_1436 NC_008787.1 1358452 1360632 R identified by match to protein family HMM PF05159; putative glycosyl transferase complement(1358452..1360632) Campylobacter jejuni subsp. jejuni 81-176 4683497 YP_001001093.1 CDS kpsF NC_008787.1 1360629 1361576 R identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; arabinose-5-phosphate isomerase complement(1360629..1361576) Campylobacter jejuni subsp. jejuni 81-176 4682462 YP_001001094.1 CDS kpsD NC_008787.1 1361586 1363244 R identified by match to protein family HMM PF02563; capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein complement(1361586..1363244) Campylobacter jejuni subsp. jejuni 81-176 4683574 YP_001001095.1 CDS kpsE NC_008787.1 1363246 1364364 R identified by match to protein family HMM PF02706; capsular polysaccharide ABC transporter complement(1363246..1364364) Campylobacter jejuni subsp. jejuni 81-176 4682716 YP_001001096.1 CDS kpsT NC_008787.1 1364364 1365026 R identified by match to protein family HMM PF00005; capsular polysaccharide ABC transporter, ATP-binding protein complement(1364364..1365026) Campylobacter jejuni subsp. jejuni 81-176 4682871 YP_001001097.1 CDS kpsM NC_008787.1 1365023 1365805 R identified by match to protein family HMM PF01061; capsular polysaccharide ABC transporter, permease protein complement(1365023..1365805) Campylobacter jejuni subsp. jejuni 81-176 4683743 YP_001001098.1 CDS CJJ81176_1442 NC_008787.1 1365877 1366284 R hypothetical protein complement(1365877..1366284) Campylobacter jejuni subsp. jejuni 81-176 4682794 YP_001001099.1 CDS CJJ81176_1443 NC_008787.1 1366359 1366922 D hypothetical protein 1366359..1366922 Campylobacter jejuni subsp. jejuni 81-176 4683458 YP_001001100.1 CDS CJJ81176_1444 NC_008787.1 1366958 1367647 D deoxyuridine triphosphatase domain-containing protein 1366958..1367647 Campylobacter jejuni subsp. jejuni 81-176 4682674 YP_001001101.1 CDS CJJ81176_1445 NC_008787.1 1367649 1368362 D identified by match to protein family HMM PF04401; hypothetical protein 1367649..1368362 Campylobacter jejuni subsp. jejuni 81-176 4682586 YP_001001102.1 CDS tilS NC_008787.1 1368345 1369310 R identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; tRNA(Ile)-lysidine synthetase complement(1368345..1369310) Campylobacter jejuni subsp. jejuni 81-176 4683625 YP_001001103.1 CDS yliG NC_008787.1 1369300 1370619 R identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; putative tRNA modifying protein complement(1369300..1370619) Campylobacter jejuni subsp. jejuni 81-176 4682108 YP_001001104.1 CDS prfB NC_008787.1 1370693 1371790 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 1370693..1371790 Campylobacter jejuni subsp. jejuni 81-176 4682409 YP_001001105.1 CDS CJJ81176_1449 NC_008787.1 1371947 1372126 R hypothetical protein complement(1371947..1372126) Campylobacter jejuni subsp. jejuni 81-176 4682499 YP_001001106.1 CDS truD NC_008787.1 1372383 1373501 R catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D complement(1372383..1373501) Campylobacter jejuni subsp. jejuni 81-176 4683064 YP_001001107.1 CDS CJJ81176_1451 NC_008787.1 1373470 1374291 R catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase complement(1373470..1374291) Campylobacter jejuni subsp. jejuni 81-176 4683347 YP_001001108.1 CDS CJJ81176_1452 NC_008787.1 1374378 1375451 D hypothetical protein 1374378..1375451 Campylobacter jejuni subsp. jejuni 81-176 4683203 YP_001001109.1 CDS CJJ81176_1453 NC_008787.1 1375448 1375831 D hypothetical protein 1375448..1375831 Campylobacter jejuni subsp. jejuni 81-176 4682396 YP_001001110.1 CDS CJJ81176_1454 NC_008787.1 1375821 1376507 D identified by match to protein family HMM PF03602; site-specific DNA methyltransferase, putative 1375821..1376507 Campylobacter jejuni subsp. jejuni 81-176 4682303 YP_001001111.1 CDS flgI NC_008787.1 1376566 1377612 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1376566..1377612 Campylobacter jejuni subsp. jejuni 81-176 4683332 YP_001001112.1 CDS CJJ81176_1456 NC_008787.1 1377612 1377953 D hypothetical protein 1377612..1377953 Campylobacter jejuni subsp. jejuni 81-176 4682095 YP_001001113.1 CDS CJJ81176_1457 NC_008787.1 1378016 1378213 D hypothetical protein 1378016..1378213 Campylobacter jejuni subsp. jejuni 81-176 4682189 YP_001001114.1 CDS CJJ81176_1458 NC_008787.1 1378256 1378690 D hypothetical protein 1378256..1378690 Campylobacter jejuni subsp. jejuni 81-176 4682491 YP_001001115.1 CDS flgK NC_008787.1 1378700 1380526 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 1378700..1380526 Campylobacter jejuni subsp. jejuni 81-176 4682126 YP_001001116.1 CDS CJJ81176_1460 NC_008787.1 1380543 1381076 D identified by match to protein family HMM TIGR02757; hypothetical protein 1380543..1381076 Campylobacter jejuni subsp. jejuni 81-176 4683448 YP_001001117.1 CDS CJJ81176_1461 NC_008787.1 1381066 1381299 D hypothetical protein 1381066..1381299 Campylobacter jejuni subsp. jejuni 81-176 4682672 YP_001001118.1 CDS CJJ81176_1462 NC_008787.1 1381310 1382074 D identified by match to protein family HMM PF01925; hypothetical protein 1381310..1382074 Campylobacter jejuni subsp. jejuni 81-176 4683322 YP_001001119.1 CDS ctsF NC_008787.1 1382071 1383249 R identified by match to protein family HMM PF00482; general secretory pathway protein F complement(1382071..1383249) Campylobacter jejuni subsp. jejuni 81-176 4682471 YP_001001120.1 CDS ctsE NC_008787.1 1383246 1384805 R identified by match to protein family HMM PF00437; general secretory pathway protein E complement(1383246..1384805) Campylobacter jejuni subsp. jejuni 81-176 4682467 YP_001001121.1 CDS ctsX NC_008787.1 1384795 1385382 R transformation system protein complement(1384795..1385382) Campylobacter jejuni subsp. jejuni 81-176 4682273 YP_001001122.1 CDS ctsP NC_008787.1 1385386 1385994 R transformation system protein complement(1385386..1385994) Campylobacter jejuni subsp. jejuni 81-176 4682461 YP_001001123.1 CDS ctsD NC_008787.1 1385987 1387399 R identified by match to protein family HMM PF00263; match to protein family HMM PF07655; match to protein family HMM PF07660; match to protein family HMM TIGR02519; general secretory pathway protein D complement(1385987..1387399) Campylobacter jejuni subsp. jejuni 81-176 4683211 YP_001001124.1 CDS ctsR NC_008787.1 1387377 1387688 R transformation system protein complement(1387377..1387688) Campylobacter jejuni subsp. jejuni 81-176 4683365 YP_001001125.1 CDS CJJ81176_1469 NC_008787.1 1387712 1391272 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate ferredoxin/flavodoxin oxidoreductase complement(1387712..1391272) Campylobacter jejuni subsp. jejuni 81-176 4683518 YP_001001126.1 CDS CJJ81176_1470 NC_008787.1 1391365 1392006 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; HAD-superfamily hydrolase, subfamily IA, variant 1 family protein complement(1391365..1392006) Campylobacter jejuni subsp. jejuni 81-176 4682750 YP_001001127.1 CDS cadF NC_008787.1 1392006 1392965 R identified by match to protein family HMM PF00691; match to protein family HMM PF01389; fibronectin-binding protein complement(1392006..1392965) Campylobacter jejuni subsp. jejuni 81-176 4683585 YP_001001128.1 CDS rpsI NC_008787.1 1393091 1393480 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(1393091..1393480) Campylobacter jejuni subsp. jejuni 81-176 4682563 YP_001001129.1 CDS rplM NC_008787.1 1393483 1393926 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(1393483..1393926) Campylobacter jejuni subsp. jejuni 81-176 4683770 YP_001001130.1 CDS CJJ81176_1474 NC_008787.1 1393992 1396757 R identified by match to protein family HMM PF00580; putative recombination protein RecB complement(1393992..1396757) Campylobacter jejuni subsp. jejuni 81-176 4682300 YP_001001131.1 CDS CJJ81176_1475 NC_008787.1 1396754 1399120 R hypothetical protein complement(1396754..1399120) Campylobacter jejuni subsp. jejuni 81-176 4683556 YP_001001132.1 CDS CJJ81176_1476 NC_008787.1 1399117 1399638 R putative lipoprotein complement(1399117..1399638) Campylobacter jejuni subsp. jejuni 81-176 4682697 YP_001001133.1 CDS CJJ81176_1477 NC_008787.1 1399625 1400227 R hypothetical protein complement(1399625..1400227) Campylobacter jejuni subsp. jejuni 81-176 4682927 YP_001001134.1 CDS CJJ81176_1478 NC_008787.1 1400322 1400540 R hypothetical protein complement(1400322..1400540) Campylobacter jejuni subsp. jejuni 81-176 4682379 YP_001001135.1 CDS ccoP NC_008787.1 1400540 1401403 R identified by match to protein family HMM PF00034; match to protein family HMM TIGR00782; cytochrome c oxidase, cbb3-type, subunit III complement(1400540..1401403) Campylobacter jejuni subsp. jejuni 81-176 4682329 YP_001001136.1 CDS ccoQ NC_008787.1 1401403 1401669 R identified by match to protein family HMM TIGR02736; cytochrome c oxidase, cbb3-type, subunit IV complement(1401403..1401669) Campylobacter jejuni subsp. jejuni 81-176 4682998 YP_001001137.1 CDS ccoO NC_008787.1 1401671 1402336 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(1401671..1402336) Campylobacter jejuni subsp. jejuni 81-176 4683420 YP_001001138.1 CDS ccoN NC_008787.1 1402349 1403815 R CcoN; FixN; cbb3-type cytochrome c oxidase subunit I complement(1402349..1403815) Campylobacter jejuni subsp. jejuni 81-176 4682278 YP_001001139.1 CDS CJJ81176_1483 NC_008787.1 1403941 1404621 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(1403941..1404621) Campylobacter jejuni subsp. jejuni 81-176 4682082 YP_001001140.1 CDS CJJ81176_1484 NC_008787.1 1404624 1405835 R identified by match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box sensor histidine kinase, putative complement(1404624..1405835) Campylobacter jejuni subsp. jejuni 81-176 4682978 YP_001001141.1 CDS CJJ81176_1485 NC_008787.1 1405832 1406491 R hypothetical protein complement(1405832..1406491) Campylobacter jejuni subsp. jejuni 81-176 4682324 YP_001001142.1 CDS carA NC_008787.1 1406488 1407606 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(1406488..1407606) Campylobacter jejuni subsp. jejuni 81-176 4682315 YP_001001143.1 CDS CJJ81176_1487 NC_008787.1 1407606 1408157 R identified by match to protein family HMM PF04368; hypothetical protein complement(1407606..1408157) Campylobacter jejuni subsp. jejuni 81-176 4683550 YP_001001144.1 CDS CJJ81176_1488 NC_008787.1 1408250 1408768 R hypothetical protein complement(1408250..1408768) Campylobacter jejuni subsp. jejuni 81-176 4682535 YP_001001145.1 CDS CJJ81176_1489 NC_008787.1 1408761 1409042 R hypothetical protein complement(1408761..1409042) Campylobacter jejuni subsp. jejuni 81-176 4683180 YP_001001146.1 CDS purA NC_008787.1 1409186 1410436 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(1409186..1410436) Campylobacter jejuni subsp. jejuni 81-176 4682127 YP_001001147.1 CDS CJJ81176_1492 NC_008787.1 1410701 1411909 D identified by match to protein family HMM PF04143; putative inner membrane protein 1410701..1411909 Campylobacter jejuni subsp. jejuni 81-176 4682646 YP_001001148.1 CDS CJJ81176_1493 NC_008787.1 1411913 1412140 D identified by match to protein family HMM PF01206; hypothetical protein 1411913..1412140 Campylobacter jejuni subsp. jejuni 81-176 4682725 YP_001001149.1 CDS putP NC_008787.1 1412156 1413625 R identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02121; sodium/proline permease complement(1412156..1413625) Campylobacter jejuni subsp. jejuni 81-176 4682290 YP_001001150.1 CDS CJJ81176_1495 NC_008787.1 1413643 1417131 R identified by match to protein family HMM PF00171; match to protein family HMM PF01619; bifunctional putA protein, putative complement(1413643..1417131) Campylobacter jejuni subsp. jejuni 81-176 4683216 YP_001001151.1 CDS selD NC_008787.1 1417262 1418188 R identified by match to protein family HMM PF02769; match to protein family HMM TIGR00476; selenide, water dikinase complement(1417262..1418188) Campylobacter jejuni subsp. jejuni 81-176 4682365 YP_001001152.1 CDS CJJ81176_1497 NC_008787.1 1418294 1418866 R identified by match to protein family HMM PF01206; hypothetical protein complement(1418294..1418866) Campylobacter jejuni subsp. jejuni 81-176 4683728 YP_001001153.1 CDS CJJ81176_1498 NC_008787.1 1418977 1421079 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(1418977..1421079) Campylobacter jejuni subsp. jejuni 81-176 4682385 YP_001001154.1 CDS CJJ81176_1499 NC_008787.1 1421192 1421893 R molybdate transport repressor complement(1421192..1421893) Campylobacter jejuni subsp. jejuni 81-176 4683269 YP_001001155.1 CDS fdhD NC_008787.1 1421922 1422704 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(1421922..1422704) Campylobacter jejuni subsp. jejuni 81-176 4682203 YP_001001156.1 CDS fdhC NC_008787.1 1422871 1423803 R identified by match to protein family HMM TIGR01583; formate dehydrogenase, cytochrome b subunit complement(1422871..1423803) Campylobacter jejuni subsp. jejuni 81-176 4683254 YP_001001157.1 CDS fdhB NC_008787.1 1423800 1424441 R identified by match to protein family HMM PF00037; formate dehydrogenase, iron-sulfur subunit complement(1423800..1424441) Campylobacter jejuni subsp. jejuni 81-176 4682598 YP_001001158.1 CDS fdhA NC_008787.1 1424438 1426678 R identified by match to protein family HMM PF00384; match to protein family HMM PF01568; formate dehydrogenase, alpha subunit, selenocysteine-containing complement(1424438..1426678) Campylobacter jejuni subsp. jejuni 81-176 4683103 YP_001001159.1 CDS CJJ81176_1504 NC_008787.1 1426700 1427242 R identified by match to protein family HMM PF04879; match to protein family HMM TIGR01409; formate dehydrogenase complement(1426700..1427242) Campylobacter jejuni subsp. jejuni 81-176 4683463 YP_001001160.1 CDS CJJ81176_1505 NC_008787.1 1427242 1427433 R identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein complement(1427242..1427433) Campylobacter jejuni subsp. jejuni 81-176 4682863 YP_001001161.1 CDS CJJ81176_1506 NC_008787.1 1427408 1428109 R hypothetical protein complement(1427408..1428109) Campylobacter jejuni subsp. jejuni 81-176 4682245 YP_001001162.1 CDS nspC NC_008787.1 1428425 1429573 R identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047; carboxynorspermidine decarboxylase complement(1428425..1429573) Campylobacter jejuni subsp. jejuni 81-176 4683484 YP_001001163.1 CDS CJJ81176_1508 NC_008787.1 1429697 1431238 D identified by match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409; oxidoreductase, putative 1429697..1431238 Campylobacter jejuni subsp. jejuni 81-176 4683673 YP_001001164.1 CDS CJJ81176_1509 NC_008787.1 1431240 1431461 D identified by match to protein family HMM PF02597; thiS family protein 1431240..1431461 Campylobacter jejuni subsp. jejuni 81-176 4683023 YP_001001165.1 CDS CJJ81176_1510 NC_008787.1 1431462 1431908 D identified by match to protein family HMM PF02391; molybdopterin converting factor, subunit 2 1431462..1431908 Campylobacter jejuni subsp. jejuni 81-176 4682222 YP_001001166.1 CDS CJJ81176_1511 NC_008787.1 1431912 1433102 D identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis MoeA protein, putative 1431912..1433102 Campylobacter jejuni subsp. jejuni 81-176 4682520 YP_001001167.1 CDS CJJ81176_1512 NC_008787.1 1433615 1434463 R hypothetical protein complement(1433615..1434463) Campylobacter jejuni subsp. jejuni 81-176 4682427 YP_001001168.1 CDS CJJ81176_1513 NC_008787.1 1434456 1435790 R hypothetical protein complement(1434456..1435790) Campylobacter jejuni subsp. jejuni 81-176 4682945 YP_001001169.1 CDS purM NC_008787.1 1436239 1437228 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(1436239..1437228) Campylobacter jejuni subsp. jejuni 81-176 4682526 YP_001001170.1 CDS coaE NC_008787.1 1437289 1437894 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1437289..1437894 Campylobacter jejuni subsp. jejuni 81-176 4683630 YP_001001171.1 CDS dapF NC_008787.1 1437891 1438640 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1437891..1438640 Campylobacter jejuni subsp. jejuni 81-176 4682924 YP_001001172.1 CDS CJJ81176_1517 NC_008787.1 1438615 1439346 D identified by match to protein family HMM PF01832; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein 1438615..1439346 Campylobacter jejuni subsp. jejuni 81-176 4682163 YP_001001173.1 CDS CJJ81176_1518 NC_008787.1 1439343 1440380 R hypothetical protein complement(1439343..1440380) Campylobacter jejuni subsp. jejuni 81-176 4682271 YP_001001174.1 CDS CJJ81176_1519 NC_008787.1 1440445 1440894 R identified by match to protein family HMM PF00210; bacterioferritin, putative complement(1440445..1440894) Campylobacter jejuni subsp. jejuni 81-176 4683328 YP_001001175.1 CDS pgi NC_008787.1 1441024 1442244 R catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase complement(1441024..1442244) Campylobacter jejuni subsp. jejuni 81-176 4682709 YP_001001176.1 CDS galU NC_008787.1 1442238 1443062 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase complement(1442238..1443062) Campylobacter jejuni subsp. jejuni 81-176 4683430 YP_001001177.1 CDS acs NC_008787.1 1443144 1445117 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(1443144..1445117) Campylobacter jejuni subsp. jejuni 81-176 4682781 YP_001001178.1 CDS CJJ81176_1523 NC_008787.1 1445255 1446250 R identified by match to protein family HMM PF00005; tungsten ABC transporter, ATP-binding protein, putative complement(1445255..1446250) Campylobacter jejuni subsp. jejuni 81-176 4682890 YP_001001179.1 CDS CJJ81176_1524 NC_008787.1 1446252 1446938 R identified by match to protein family HMM PF00528; tungstate ABC transporter, permease protein, putative complement(1446252..1446938) Campylobacter jejuni subsp. jejuni 81-176 4682237 YP_001001180.1 CDS CJJ81176_1525 NC_008787.1 1447017 1447826 D tungstate ABC transporter, periplasmic tungstate-binding protein, putative 1447017..1447826 Campylobacter jejuni subsp. jejuni 81-176 4682905 YP_001001181.1 CDS CJJ81176_1526 NC_008787.1 1447968 1448735 D identified by match to protein family HMM PF03746; LamB/YcsF family protein 1447968..1448735 Campylobacter jejuni subsp. jejuni 81-176 4682412 YP_001001182.1 CDS CJJ81176_1527 NC_008787.1 1448745 1449485 D identified by match to protein family HMM PF02682; match to protein family HMM TIGR00370; hypothetical protein 1448745..1449485 Campylobacter jejuni subsp. jejuni 81-176 4682841 YP_001001183.1 CDS CJJ81176_1528 NC_008787.1 1449466 1450431 D identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724; hypothetical protein 1449466..1450431 Campylobacter jejuni subsp. jejuni 81-176 4683492 YP_001001184.1 CDS CJJ81176_1529 NC_008787.1 1450428 1451324 R identified by match to protein family HMM PF00892; integral membrane protein complement(1450428..1451324) Campylobacter jejuni subsp. jejuni 81-176 4682922 YP_001001185.1 CDS CJJ81176_1530 NC_008787.1 1451357 1451935 R identified by match to protein family HMM PF02525; flavodoxin-like fold domain-containing protein complement(1451357..1451935) Campylobacter jejuni subsp. jejuni 81-176 4682517 YP_001001186.1 CDS CJJ81176_1531 NC_008787.1 1452035 1452382 D identified by match to protein family HMM PF01638; transcriptional regulator, putative 1452035..1452382 Campylobacter jejuni subsp. jejuni 81-176 4682162 YP_001001187.1 CDS CJJ81176_1532 NC_008787.1 1452370 1452819 D identified by match to protein family HMM PF08212; putative homolog of BLC protein 1452370..1452819 Campylobacter jejuni subsp. jejuni 81-176 4683091 YP_001001188.1 CDS CJJ81176_1533 NC_008787.1 1452821 1453897 R identified by match to protein family HMM PF00107; zinc-binding dehydrogenase family oxidoreductase complement(1452821..1453897) Campylobacter jejuni subsp. jejuni 81-176 4683723 YP_001001189.1 CDS CJJ81176_1534 NC_008787.1 1454125 1457220 R identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I restriction-modification enzyme, R subunit complement(1454125..1457220) Campylobacter jejuni subsp. jejuni 81-176 4682132 YP_001001190.1 CDS CJJ81176_1535 NC_008787.1 1457223 1458989 R RloH complement(1457223..1458989) Campylobacter jejuni subsp. jejuni 81-176 4683727 YP_001001191.1 CDS CJJ81176_1536 NC_008787.1 1459000 1460142 R identified by match to protein family HMM PF01420; hypothetical protein complement(1459000..1460142) Campylobacter jejuni subsp. jejuni 81-176 4683259 YP_001001192.1 CDS CJJ81176_1537 NC_008787.1 1460154 1460315 D hypothetical protein 1460154..1460315 Campylobacter jejuni subsp. jejuni 81-176 4682177 YP_001001193.1 CDS CJJ81176_1538 NC_008787.1 1460361 1461812 R identified by match to protein family HMM PF04326; MloB complement(1460361..1461812) Campylobacter jejuni subsp. jejuni 81-176 4683118 YP_001001194.1 CDS CJJ81176_1539 NC_008787.1 1461824 1463326 R identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit complement(1461824..1463326) Campylobacter jejuni subsp. jejuni 81-176 4682707 YP_001001195.1 CDS CJJ81176_1540 NC_008787.1 1463390 1463503 D hypothetical protein 1463390..1463503 Campylobacter jejuni subsp. jejuni 81-176 4683257 YP_001001196.1 CDS CJJ81176_1541 NC_008787.1 1463696 1464331 R hypothetical protein complement(1463696..1464331) Campylobacter jejuni subsp. jejuni 81-176 4682332 YP_001001197.1 CDS CJJ81176_1542 NC_008787.1 1464524 1464856 D identified by match to protein family HMM PF01638; transcriptional regulator 1464524..1464856 Campylobacter jejuni subsp. jejuni 81-176 4683588 YP_001001198.1 CDS CJJ81176_1543 NC_008787.1 1464941 1465063 D permease, putative 1464941..1465063 Campylobacter jejuni subsp. jejuni 81-176 4683330 YP_001001199.1 CDS CJJ81176_1544 NC_008787.1 1465247 1465888 D identified by match to protein family HMM PF03773; hypothetical protein 1465247..1465888 Campylobacter jejuni subsp. jejuni 81-176 4682284 YP_001001200.1 CDS arsR NC_008787.1 1465898 1466077 D identified by match to protein family HMM PF01022; arsenical resistance operon repressor 1465898..1466077 Campylobacter jejuni subsp. jejuni 81-176 4682939 YP_001001201.1 CDS CJJ81176_1546 NC_008787.1 1466068 1466220 D arsenical resistance operon repressor 1466068..1466220 Campylobacter jejuni subsp. jejuni 81-176 4683094 YP_001001202.1 CDS CJJ81176_1547 NC_008787.1 1466228 1466659 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(1466228..1466659) Campylobacter jejuni subsp. jejuni 81-176 4683733 YP_001001203.1 CDS CJJ81176_1548 NC_008787.1 1466772 1467653 D identified by match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1466772..1467653 Campylobacter jejuni subsp. jejuni 81-176 4682996 YP_001001204.1 CDS CJJ81176_1549 NC_008787.1 1468028 1468738 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1468028..1468738 Campylobacter jejuni subsp. jejuni 81-176 4682173 YP_001001205.1 CDS pflA NC_008787.1 1468781 1471147 R paralyzed flagella protein PflA complement(1468781..1471147) Campylobacter jejuni subsp. jejuni 81-176 4683382 YP_001001206.1 CDS nuoN NC_008787.1 1471169 1472557 R identified by match to protein family HMM PF00361; NADH-quinone oxidoreductase, N subunit complement(1471169..1472557) Campylobacter jejuni subsp. jejuni 81-176 4682578 YP_001001207.1 CDS nuoM NC_008787.1 1472547 1474034 R identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972; NADH-quinone oxidoreductase, M subunit complement(1472547..1474034) Campylobacter jejuni subsp. jejuni 81-176 4682882 YP_001001208.1 CDS nuoL NC_008787.1 1474036 1475826 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(1474036..1475826) Campylobacter jejuni subsp. jejuni 81-176 4682136 YP_001001209.1 CDS nuoK NC_008787.1 1475828 1476124 R identified by match to protein family HMM PF00420; NADH-quinone oxidoreductase, K subunit complement(1475828..1476124) Campylobacter jejuni subsp. jejuni 81-176 4683310 YP_001001210.1 CDS nuoJ NC_008787.1 1476121 1476639 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(1476121..1476639) Campylobacter jejuni subsp. jejuni 81-176 4682468 YP_001001211.1 CDS nuoI NC_008787.1 1476636 1477277 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(1476636..1477277) Campylobacter jejuni subsp. jejuni 81-176 4683137 YP_001001212.1 CDS nuoH NC_008787.1 1477287 1478285 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(1477287..1478285) Campylobacter jejuni subsp. jejuni 81-176 4682621 YP_001001213.1 CDS nuoG NC_008787.1 1478278 1480740 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G complement(1478278..1480740) Campylobacter jejuni subsp. jejuni 81-176 4682966 YP_001001214.1 CDS CJJ81176_1559 NC_008787.1 1480737 1481429 R hypothetical protein complement(1480737..1481429) Campylobacter jejuni subsp. jejuni 81-176 4683525 YP_001001215.1 CDS CJJ81176_1560 NC_008787.1 1481426 1481566 R hypothetical protein complement(1481426..1481566) Campylobacter jejuni subsp. jejuni 81-176 4682431 YP_001001216.1 CDS nuoD NC_008787.1 1481650 1482876 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(1481650..1482876) Campylobacter jejuni subsp. jejuni 81-176 4682938 YP_001001217.1 CDS nuoC NC_008787.1 1482878 1483669 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit C complement(1482878..1483669) Campylobacter jejuni subsp. jejuni 81-176 4682548 YP_001001218.1 CDS nuoB NC_008787.1 1483669 1484172 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1483669..1484172) Campylobacter jejuni subsp. jejuni 81-176 4683194 YP_001001219.1 CDS nuoA NC_008787.1 1484154 1484543 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit A complement(1484154..1484543) Campylobacter jejuni subsp. jejuni 81-176 4682982 YP_001001220.1 CDS CJJ81176_1565 NC_008787.1 1484756 1485421 R identified by match to protein family HMM PF00005; peptide ABC transporter, ATP-binding protein complement(1484756..1485421) Campylobacter jejuni subsp. jejuni 81-176 4682464 YP_001001221.1 CDS CJJ81176_1566 NC_008787.1 1485414 1486124 R identified by match to protein family HMM PF00005; peptide ABC transporter, ATP-binding protein complement(1485414..1486124) Campylobacter jejuni subsp. jejuni 81-176 4683775 YP_001001222.1 CDS CJJ81176_1567 NC_008787.1 1486121 1486909 R identified by match to protein family HMM PF00528; peptide ABC transporter, permease protein complement(1486121..1486909) Campylobacter jejuni subsp. jejuni 81-176 4682893 YP_001001223.1 CDS CJJ81176_1568 NC_008787.1 1486902 1487846 R identified by match to protein family HMM PF00528; peptide ABC transporter, permease protein complement(1486902..1487846) Campylobacter jejuni subsp. jejuni 81-176 4682777 YP_001001224.1 CDS CJJ81176_1569 NC_008787.1 1487846 1489381 R identified by match to protein family HMM PF00496; peptide ABC transporter, periplasmic peptide-binding protein complement(1487846..1489381) Campylobacter jejuni subsp. jejuni 81-176 4682302 YP_001001225.1 CDS CJJ81176_1570 NC_008787.1 1489716 1492040 D identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR02166; anaerobic dimethyl sulfoxide reductase chain A 1489716..1492040 Campylobacter jejuni subsp. jejuni 81-176 4682122 YP_001001226.1 CDS dmsB NC_008787.1 1492051 1492707 D identified by match to protein family HMM PF00037; match to protein family HMM TIGR02951; dimethylsulfoxide reductase, chain B 1492051..1492707 Campylobacter jejuni subsp. jejuni 81-176 4682878 YP_001001227.1 CDS CJJ81176_1572 NC_008787.1 1492694 1493560 D hypothetical protein 1492694..1493560 Campylobacter jejuni subsp. jejuni 81-176 4682874 YP_001001228.1 CDS CJJ81176_1573 NC_008787.1 1493560 1494117 D hypothetical protein 1493560..1494117 Campylobacter jejuni subsp. jejuni 81-176 4682767 YP_001001229.1 CDS CJJ81176_1574 NC_008787.1 1494184 1494606 D identified by match to protein family HMM PF00042; flavohemoprotein, truncation 1494184..1494606 Campylobacter jejuni subsp. jejuni 81-176 4683670 YP_001001230.1 CDS CJJ81176_1575 NC_008787.1 1494626 1496257 R efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane component/ATP-binding component complement(1494626..1496257) Campylobacter jejuni subsp. jejuni 81-176 4682331 YP_001001231.1 CDS CJJ81176_1576 NC_008787.1 1496307 1497602 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; proline/betaine transporter, putative, authentic frameshift complement(1496307..1497602) Campylobacter jejuni subsp. jejuni 81-176 4683172 YP_001001232.1 CDS CJJ81176_1577 NC_008787.1 1497690 1498487 D identified by match to protein family HMM PF00753; hypothetical protein 1497690..1498487 Campylobacter jejuni subsp. jejuni 81-176 4683781 YP_001001233.1 CDS infA NC_008787.1 1498575 1498793 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1498575..1498793 Campylobacter jejuni subsp. jejuni 81-176 4683475 YP_001001234.1 CDS rpmJ NC_008787.1 1498965 1499078 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 1498965..1499078 Campylobacter jejuni subsp. jejuni 81-176 4682774 YP_001001235.1 CDS rpsM NC_008787.1 1499081 1499446 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1499081..1499446 Campylobacter jejuni subsp. jejuni 81-176 4682446 YP_001001236.1 CDS rpsK NC_008787.1 1499456 1499848 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1499456..1499848 Campylobacter jejuni subsp. jejuni 81-176 4682771 YP_001001237.1 CDS rpsD NC_008787.1 1499876 1500502 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1499876..1500502 Campylobacter jejuni subsp. jejuni 81-176 4683623 YP_001001238.1 CDS rpoA NC_008787.1 1500515 1501528 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1500515..1501528 Campylobacter jejuni subsp. jejuni 81-176 4682542 YP_001001239.1 CDS rplQ NC_008787.1 1501532 1501885 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1501532..1501885 Campylobacter jejuni subsp. jejuni 81-176 4683640 YP_001001240.1 CDS hisG NC_008787.1 1502058 1502957 D long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 1502058..1502957 Campylobacter jejuni subsp. jejuni 81-176 4682744 YP_001001241.1 CDS hisD NC_008787.1 1502965 1504251 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1502965..1504251 Campylobacter jejuni subsp. jejuni 81-176 4683658 YP_001001242.1 CDS hisB NC_008787.1 1504248 1505306 D catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1504248..1505306 Campylobacter jejuni subsp. jejuni 81-176 4682862 YP_001001243.1 CDS hisH NC_008787.1 1505303 1505890 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1505303..1505890 Campylobacter jejuni subsp. jejuni 81-176 4682813 YP_001001244.1 CDS hisA NC_008787.1 1505887 1506618 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1505887..1506618 Campylobacter jejuni subsp. jejuni 81-176 4682484 YP_001001245.1 CDS CJJ81176_1589 NC_008787.1 1506603 1507505 D identified by match to protein family HMM PF04373; HrgA protein 1506603..1507505 Campylobacter jejuni subsp. jejuni 81-176 4683206 YP_001001246.1 CDS hisF-2 NC_008787.1 1507506 1508273 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1507506..1508273 Campylobacter jejuni subsp. jejuni 81-176 4682287 YP_001001247.1 CDS hisI NC_008787.1 1508275 1508898 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1508275..1508898 Campylobacter jejuni subsp. jejuni 81-176 4682128 YP_001001248.1 CDS CJJ81176_1592 NC_008787.1 1508922 1510082 R 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative complement(1508922..1510082) Campylobacter jejuni subsp. jejuni 81-176 4683306 YP_001001249.1 CDS mrp NC_008787.1 1510108 1511214 R identified by match to protein family HMM PF01883; ATP/GTP-binding protein complement(1510108..1511214) Campylobacter jejuni subsp. jejuni 81-176 4682929 YP_001001250.1 CDS ispDF NC_008787.1 1511337 1512452 D bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein 1511337..1512452 Campylobacter jejuni subsp. jejuni 81-176 4683589 YP_001001251.1 CDS CJJ81176_1595 NC_008787.1 1512449 1513336 D identified by match to protein family HMM PF00072; DNA-binding response regulator, putative 1512449..1513336 Campylobacter jejuni subsp. jejuni 81-176 4682559 YP_001001252.1 CDS CJJ81176_1596 NC_008787.1 1513314 1514474 D ATP-sulfurylase family protein 1513314..1514474 Campylobacter jejuni subsp. jejuni 81-176 4683079 YP_001001253.1 CDS pgpA NC_008787.1 1514479 1514979 D identified by match to protein family HMM PF04608; phosphatidylglycerophosphatase A 1514479..1514979 Campylobacter jejuni subsp. jejuni 81-176 4682269 YP_001001254.1 CDS rpsT NC_008787.1 1515058 1515321 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1515058..1515321 Campylobacter jejuni subsp. jejuni 81-176 4683165 YP_001001255.1 CDS prfA NC_008787.1 1515340 1516407 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1515340..1516407 Campylobacter jejuni subsp. jejuni 81-176 4683582 YP_001001256.1 CDS CJJ81176_1600 NC_008787.1 1516421 1517176 R identified by match to protein family HMM PF01243; hypothetical protein complement(1516421..1517176) Campylobacter jejuni subsp. jejuni 81-176 4682720 YP_001001257.1 CDS chuA NC_008787.1 1517370 1519478 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent heme receptor 1517370..1519478 Campylobacter jejuni subsp. jejuni 81-176 4682551 YP_001001258.1 CDS CJJ81176_1602 NC_008787.1 1519453 1520439 D identified by match to protein family HMM PF01032; hemin ABC transporter, permease protein, putative 1519453..1520439 Campylobacter jejuni subsp. jejuni 81-176 4683286 YP_001001259.1 CDS CJJ81176_1603 NC_008787.1 1520439 1521215 D identified by match to protein family HMM PF00005; hemin ABC transporter, ATP-binding protein, putative 1520439..1521215 Campylobacter jejuni subsp. jejuni 81-176 4683553 YP_001001260.1 CDS CJJ81176_1604 NC_008787.1 1521212 1522018 D identified by match to protein family HMM PF01497; hemin ABC transporter, periplasmic hemin-binding protein, putative 1521212..1522018 Campylobacter jejuni subsp. jejuni 81-176 4683108 YP_001001261.1 CDS CJJ81176_1605 NC_008787.1 1522015 1522932 R identified by match to protein family HMM PF04055; hypothetical protein complement(1522015..1522932) Campylobacter jejuni subsp. jejuni 81-176 4683730 YP_001001262.1 CDS kgtP NC_008787.1 1523038 1524297 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; alpha-ketoglutarate permease 1523038..1524297 Campylobacter jejuni subsp. jejuni 81-176 4682092 YP_001001263.1 CDS mutY NC_008787.1 1524283 1525302 R identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase complement(1524283..1525302) Campylobacter jejuni subsp. jejuni 81-176 4682417 YP_001001264.1 CDS CJJ81176_1608 NC_008787.1 1525375 1526127 D hypothetical protein 1525375..1526127 Campylobacter jejuni subsp. jejuni 81-176 4682666 YP_001001265.1 CDS ribD NC_008787.1 1526775 1527785 D identified by match to protein family HMM PF00383; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 1526775..1527785 Campylobacter jejuni subsp. jejuni 81-176 4682258 YP_001001266.1 CDS CJJ81176_1614 NC_008787.1 1527775 1528287 D hypothetical protein 1527775..1528287 Campylobacter jejuni subsp. jejuni 81-176 4682296 YP_001001267.1 CDS sdaA NC_008787.1 1528295 1529659 R identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine ammonia-lyase complement(1528295..1529659) Campylobacter jejuni subsp. jejuni 81-176 4683707 YP_001001268.1 CDS sdaC NC_008787.1 1529674 1530924 R identified by match to protein family HMM PF03222; match to protein family HMM PF03845; serine transporter complement(1529674..1530924) Campylobacter jejuni subsp. jejuni 81-176 4682779 YP_001001269.1 CDS CJJ81176_1617 NC_008787.1 1531185 1531601 R hypothetical protein complement(1531185..1531601) Campylobacter jejuni subsp. jejuni 81-176 4683443 YP_001001270.1 CDS CJJ81176_1618 NC_008787.1 1531666 1532409 R hypothetical protein complement(1531666..1532409) Campylobacter jejuni subsp. jejuni 81-176 4682084 YP_001001271.1 CDS exbB-2 NC_008787.1 1532555 1532992 D identified by match to protein family HMM PF01618; match to protein family HMM TIGR02805; TonB system transport protein ExbB 1532555..1532992 Campylobacter jejuni subsp. jejuni 81-176 4682433 YP_001001272.1 CDS exbD NC_008787.1 1532964 1533374 D identified by match to protein family HMM PF02472; match to protein family HMM TIGR02804; biopolymer transport exbD protein 1532964..1533374 Campylobacter jejuni subsp. jejuni 81-176 4682969 YP_001001273.1 CDS CJJ81176_1621 NC_008787.1 1533371 1534054 D identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB-dependent receptor, putative, authentic frameshift 1533371..1534054 Campylobacter jejuni subsp. jejuni 81-176 4682865 YP_001001274.1 CDS CJJ81176_1622 NC_008787.1 1534074 1534943 R hypothetical protein complement(1534074..1534943) Campylobacter jejuni subsp. jejuni 81-176 4682087 YP_001001275.1 CDS CJJ81176_1623 NC_008787.1 1534947 1535108 R putative periplasmic protein complement(1534947..1535108) Campylobacter jejuni subsp. jejuni 81-176 4682677 YP_001001276.1 CDS CJJ81176_1624 NC_008787.1 1535203 1536186 D hypothetical protein 1535203..1536186 Campylobacter jejuni subsp. jejuni 81-176 4683403 YP_001001277.1 CDS aroC NC_008787.1 1536273 1537361 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1536273..1537361) Campylobacter jejuni subsp. jejuni 81-176 4682989 YP_001001278.1 CDS rnc NC_008787.1 1537361 1538038 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(1537361..1538038) Campylobacter jejuni subsp. jejuni 81-176 4682450 YP_001001279.1 CDS rnhA NC_008787.1 1538022 1538462 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H complement(1538022..1538462) Campylobacter jejuni subsp. jejuni 81-176 4683041 YP_001001280.1 CDS CJJ81176_1628 NC_008787.1 1538449 1539435 R identified by match to protein family HMM PF07719; hypothetical protein complement(1538449..1539435) Campylobacter jejuni subsp. jejuni 81-176 4682541 YP_001001281.1 CDS dnaG NC_008787.1 1539478 1541322 D synthesizes RNA primers at the replication forks; DNA primase 1539478..1541322 Campylobacter jejuni subsp. jejuni 81-176 4682822 YP_001001282.1 CDS CJJ81176_1630 NC_008787.1 1541404 1541676 D identified by match to protein family HMM PF01106; NifU family protein 1541404..1541676 Campylobacter jejuni subsp. jejuni 81-176 4683559 YP_001001283.1 CDS CJJ81176_1631 NC_008787.1 1541663 1542214 D hypothetical protein 1541663..1542214 Campylobacter jejuni subsp. jejuni 81-176 4682459 YP_001001284.1 CDS murE NC_008787.1 1542198 1543481 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1542198..1543481 Campylobacter jejuni subsp. jejuni 81-176 4683319 YP_001001285.1 CDS CJJ81176_1633 NC_008787.1 1543485 1543796 D identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 1543485..1543796 Campylobacter jejuni subsp. jejuni 81-176 4682134 YP_001001286.1 CDS CJJ81176_1634 NC_008787.1 1543817 1544887 D PDZ domain-containing protein 1543817..1544887 Campylobacter jejuni subsp. jejuni 81-176 4683359 YP_001001287.1 CDS ispA NC_008787.1 1544884 1545729 D identified by match to protein family HMM PF00348; geranyltranstransferase 1544884..1545729 Campylobacter jejuni subsp. jejuni 81-176 4683722 YP_001001288.1 CDS tkt NC_008787.1 1545739 1547637 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1545739..1547637 Campylobacter jejuni subsp. jejuni 81-176 4683368 YP_001001289.1 CDS CJJ81176_1637 NC_008787.1 1547639 1548748 D identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; ABC transporter, permease protein, putative 1547639..1548748 Campylobacter jejuni subsp. jejuni 81-176 4683287 YP_001001290.1 CDS CJJ81176_1638 NC_008787.1 1548749 1549471 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1548749..1549471 Campylobacter jejuni subsp. jejuni 81-176 4682183 YP_001001291.1 CDS CJJ81176_1639 NC_008787.1 1549474 1550364 D identified by match to protein family HMM PF02470; ABC transporter, periplasmic substrate-binding protein, putative 1549474..1550364 Campylobacter jejuni subsp. jejuni 81-176 4682193 YP_001001292.1 CDS CJJ81176_1640 NC_008787.1 1550364 1550963 D putative lipoprotein 1550364..1550963 Campylobacter jejuni subsp. jejuni 81-176 4683571 YP_001001293.1 CDS CJJ81176_1641 NC_008787.1 1551019 1551519 D hypothetical protein 1551019..1551519 Campylobacter jejuni subsp. jejuni 81-176 4682546 YP_001001294.1 CDS map NC_008787.1 1551891 1552649 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1551891..1552649) Campylobacter jejuni subsp. jejuni 81-176 4683596 YP_001001295.1 CDS murI NC_008787.1 1552659 1553402 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(1552659..1553402) Campylobacter jejuni subsp. jejuni 81-176 4682439 YP_001001296.1 CDS nlpC NC_008787.1 1553404 1553865 R identified by match to protein family HMM PF00877; lipoprotein NlpC complement(1553404..1553865) Campylobacter jejuni subsp. jejuni 81-176 4683321 YP_001001297.1 CDS nhaA NC_008787.1 1553874 1555043 R exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter complement(1553874..1555043) Campylobacter jejuni subsp. jejuni 81-176 4683487 YP_001001298.1 CDS nhaA-2 NC_008787.1 1555040 1556188 R identified by match to protein family HMM PF06965; match to protein family HMM TIGR00773; Na+/H+ antiporter NhaA complement(1555040..1556188) Campylobacter jejuni subsp. jejuni 81-176 4682790 YP_001001299.1 CDS CJJ81176_1647 NC_008787.1 1556330 1556512 R hypothetical protein complement(1556330..1556512) Campylobacter jejuni subsp. jejuni 81-176 4683654 YP_001001300.1 CDS CJJ81176_1648 NC_008787.1 1556873 1557085 D hypothetical protein 1556873..1557085 Campylobacter jejuni subsp. jejuni 81-176 4683765 YP_001001301.1 CDS CJJ81176_1649 NC_008787.1 1557435 1559525 D identified by match to protein family HMM PF03239; FTR1 family iron permease 1557435..1559525 Campylobacter jejuni subsp. jejuni 81-176 4683110 YP_001001302.1 CDS CJJ81176_1650 NC_008787.1 1559522 1560061 D hypothetical protein 1559522..1560061 Campylobacter jejuni subsp. jejuni 81-176 4682626 YP_001001303.1 CDS CJJ81176_1651 NC_008787.1 1560144 1561547 D identified by match to protein family HMM PF04945; hypothetical protein 1560144..1561547 Campylobacter jejuni subsp. jejuni 81-176 4682160 YP_001001304.1 CDS CJJ81176_1652 NC_008787.1 1561537 1562826 D identified by match to protein family HMM PF02687; ABC transporter, permease protein 1561537..1562826 Campylobacter jejuni subsp. jejuni 81-176 4682756 YP_001001305.1 CDS CJJ81176_1653 NC_008787.1 1562816 1563934 D identified by match to protein family HMM PF02687; ABC transporter, permease protein 1562816..1563934 Campylobacter jejuni subsp. jejuni 81-176 4683468 YP_001001306.1 CDS CJJ81176_1654 NC_008787.1 1563934 1564584 D identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1563934..1564584 Campylobacter jejuni subsp. jejuni 81-176 4682791 YP_001001307.1 CDS CJJ81176_1655 NC_008787.1 1564581 1565069 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; thiredoxin,-like protein 1564581..1565069 Campylobacter jejuni subsp. jejuni 81-176 4682568 YP_001001308.1 CDS CJJ81176_1656 NC_008787.1 1565264 1565533 D identified by match to protein family HMM PF08534; thioredoxin family protein 1565264..1565533 Campylobacter jejuni subsp. jejuni 81-176 4683107 YP_001001309.1 CDS CJJ81176_1657 NC_008787.1 1565543 1565980 R identified by match to protein family HMM PF04214; hypothetical protein complement(1565543..1565980) Campylobacter jejuni subsp. jejuni 81-176 4682414 YP_001001310.1 CDS CJJ81176_1658 NC_008787.1 1566071 1566214 R hypothetical protein complement(1566071..1566214) Campylobacter jejuni subsp. jejuni 81-176 4683360 YP_001001311.1 CDS CJJ81176_1659 NC_008787.1 1566448 1566585 R hypothetical protein complement(1566448..1566585) Campylobacter jejuni subsp. jejuni 81-176 4682908 YP_001001312.1 CDS CJJ81176_1665 NC_008787.1 1567354 1568202 R catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase complement(1567354..1568202) Campylobacter jejuni subsp. jejuni 81-176 4682164 YP_001001313.1 CDS CJJ81176_1666 NC_008787.1 1568202 1568864 R hypothetical protein complement(1568202..1568864) Campylobacter jejuni subsp. jejuni 81-176 4682364 YP_001001314.1 CDS CJJ81176_1667 NC_008787.1 1568854 1569057 R hypothetical protein complement(1568854..1569057) Campylobacter jejuni subsp. jejuni 81-176 4683244 YP_001001315.1 CDS eno NC_008787.1 1569123 1570367 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(1569123..1570367) Campylobacter jejuni subsp. jejuni 81-176 4682309 YP_001001316.1 CDS recA NC_008787.1 1570367 1571398 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(1570367..1571398) Campylobacter jejuni subsp. jejuni 81-176 4683309 YP_001001317.1 CDS CJJ81176_1670 NC_008787.1 1571505 1572365 D identified by match to protein family HMM PF02642; hypothetical protein 1571505..1572365 Campylobacter jejuni subsp. jejuni 81-176 4682500 YP_001001318.1 CDS fliQ NC_008787.1 1572377 1572646 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1572377..1572646 Campylobacter jejuni subsp. jejuni 81-176 4682694 YP_001001319.1 CDS murB NC_008787.1 1572643 1573419 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1572643..1573419 Campylobacter jejuni subsp. jejuni 81-176 4682577 YP_001001320.1 CDS CJJ81176_1673 NC_008787.1 1573442 1574206 R hypothetical protein complement(1573442..1574206) Campylobacter jejuni subsp. jejuni 81-176 4683116 YP_001001321.1 CDS cysQ NC_008787.1 1574252 1575016 R identified by match to protein family HMM PF00459; cysQ protein complement(1574252..1575016) Campylobacter jejuni subsp. jejuni 81-176 4683599 YP_001001322.1 CDS gltA NC_008787.1 1575097 1576365 R identified by match to protein family HMM PF00285; match to protein family HMM TIGR01798; citrate synthase complement(1575097..1576365) Campylobacter jejuni subsp. jejuni 81-176 4683222 YP_001001323.1 CDS CJJ81176_1676 NC_008787.1 1576480 1577655 R identified by match to protein family HMM PF00999; sodium/hydrogen exchanger family protein complement(1576480..1577655) Campylobacter jejuni subsp. jejuni 81-176 4683197 YP_001001324.1 CDS bioB NC_008787.1 1577636 1578472 R catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase complement(1577636..1578472) Campylobacter jejuni subsp. jejuni 81-176 4682612 YP_001001325.1 CDS topA NC_008787.1 1578474 1580576 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(1578474..1580576) Campylobacter jejuni subsp. jejuni 81-176 4683417 YP_001001326.1 CDS CJJ81176_1679 NC_008787.1 1580771 1582042 D identified by match to protein family HMM PF07690; major facilitator superfamily protein 1580771..1582042 Campylobacter jejuni subsp. jejuni 81-176 4682754 YP_001001327.1 CDS CJJ81176_1680 NC_008787.1 1582110 1584122 R identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; dipeptidyl-peptidase complement(1582110..1584122) Campylobacter jejuni subsp. jejuni 81-176 4683735 YP_001001328.1 CDS CJJ81176_1681 NC_008787.1 1584119 1584430 R hypothetical protein complement(1584119..1584430) Campylobacter jejuni subsp. jejuni 81-176 4683011 YP_001001329.1 CDS CJJ81176_1682 NC_008787.1 1584418 1584789 R hypothetical protein complement(1584418..1584789) Campylobacter jejuni subsp. jejuni 81-176 4682381 YP_001001330.1 CDS CJJ81176_1683 NC_008787.1 1584804 1585052 R hypothetical protein complement(1584804..1585052) Campylobacter jejuni subsp. jejuni 81-176 4682342 YP_001001331.1 CDS CJJ81176_1684 NC_008787.1 1585049 1585321 R hypothetical protein complement(1585049..1585321) Campylobacter jejuni subsp. jejuni 81-176 4683217 YP_001001332.1 CDS secY NC_008787.1 1585547 1586812 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(1585547..1586812) Campylobacter jejuni subsp. jejuni 81-176 4682639 YP_001001333.1 CDS rplO NC_008787.1 1586812 1587204 R late assembly protein; 50S ribosomal protein L15 complement(1586812..1587204) Campylobacter jejuni subsp. jejuni 81-176 4682888 YP_001001334.1 CDS rpsE NC_008787.1 1587209 1587652 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(1587209..1587652) Campylobacter jejuni subsp. jejuni 81-176 4682719 YP_001001335.1 CDS rplR NC_008787.1 1587664 1588020 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(1587664..1588020) Campylobacter jejuni subsp. jejuni 81-176 4683542 YP_001001336.1 CDS rplF NC_008787.1 1588030 1588566 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(1588030..1588566) Campylobacter jejuni subsp. jejuni 81-176 4682441 YP_001001337.1 CDS rpsH NC_008787.1 1588645 1589040 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(1588645..1589040) Campylobacter jejuni subsp. jejuni 81-176 4682576 YP_001001338.1 CDS rpsN NC_008787.1 1589050 1589235 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(1589050..1589235) Campylobacter jejuni subsp. jejuni 81-176 4683302 YP_001001339.1 CDS rplE NC_008787.1 1589237 1589782 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(1589237..1589782) Campylobacter jejuni subsp. jejuni 81-176 4682447 YP_001001340.1 CDS rplX NC_008787.1 1589786 1590019 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(1589786..1590019) Campylobacter jejuni subsp. jejuni 81-176 4682947 YP_001001341.1 CDS rplN NC_008787.1 1590019 1590387 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(1590019..1590387) Campylobacter jejuni subsp. jejuni 81-176 4682967 YP_001001342.1 CDS rpsQ NC_008787.1 1590387 1590638 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(1590387..1590638) Campylobacter jejuni subsp. jejuni 81-176 4683610 YP_001001343.1 CDS rpmC NC_008787.1 1590648 1590833 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(1590648..1590833) Campylobacter jejuni subsp. jejuni 81-176 4682493 YP_001001344.1 CDS rplP NC_008787.1 1590820 1591245 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(1590820..1591245) Campylobacter jejuni subsp. jejuni 81-176 4683633 YP_001001345.1 CDS rpsC NC_008787.1 1591248 1591949 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(1591248..1591949) Campylobacter jejuni subsp. jejuni 81-176 4683273 YP_001001346.1 CDS rplV NC_008787.1 1591949 1592392 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(1591949..1592392) Campylobacter jejuni subsp. jejuni 81-176 4683608 YP_001001347.1 CDS rpsS NC_008787.1 1592403 1592684 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(1592403..1592684) Campylobacter jejuni subsp. jejuni 81-176 4683665 YP_001001348.1 CDS rplB NC_008787.1 1592686 1593516 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(1592686..1593516) Campylobacter jejuni subsp. jejuni 81-176 4682594 YP_001001349.1 CDS rplW NC_008787.1 1593518 1593799 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(1593518..1593799) Campylobacter jejuni subsp. jejuni 81-176 4682349 YP_001001350.1 CDS rplD NC_008787.1 1593802 1594416 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(1593802..1594416) Campylobacter jejuni subsp. jejuni 81-176 4682957 YP_001001351.1 CDS rplC NC_008787.1 1594413 1594988 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(1594413..1594988) Campylobacter jejuni subsp. jejuni 81-176 4682650 YP_001001352.1 CDS rpsJ NC_008787.1 1594998 1595309 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(1594998..1595309) Campylobacter jejuni subsp. jejuni 81-176 4683175 YP_001001353.1 CDS CJJ81176_0003 NC_008787.1 1595507 1596268 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein complement(1595507..1596268) Campylobacter jejuni subsp. jejuni 81-176 4682146 YP_001001354.1 CDS CJJ81176_0004 NC_008787.1 1596303 1598291 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; metallo-beta-lactamase family protein complement(1596303..1598291) Campylobacter jejuni subsp. jejuni 81-176 4683471 YP_001001355.1 CDS ksgA NC_008787.1 1598266 1599066 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(1598266..1599066) Campylobacter jejuni subsp. jejuni 81-176 4682838 YP_001001356.1 CDS CJJ81176_0006 NC_008787.1 1599146 1599682 D hypothetical protein 1599146..1599682 Campylobacter jejuni subsp. jejuni 81-176 4682701 YP_001001357.1 CDS CJJ81176_0007 NC_008787.1 1599705 1600775 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1599705..1600775 Campylobacter jejuni subsp. jejuni 81-176 4683415 YP_001001358.1 CDS CJJ81176_0010 NC_008787.1 1601640 1602251 D lipopolysaccharide core biosynthesis protien, putative 1601640..1602251 Campylobacter jejuni subsp. jejuni 81-176 4682483 YP_001001359.1 CDS CJJ81176_0013 NC_008787.1 1602572 1603102 D identified by match to protein family HMM PF00583; acetyltransferase 1602572..1603102 Campylobacter jejuni subsp. jejuni 81-176 4682571 YP_001001360.1 CDS leuD NC_008787.1 1603082 1603684 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(1603082..1603684) Campylobacter jejuni subsp. jejuni 81-176 4682782 YP_001001361.1 CDS leuC NC_008787.1 1603686 1605092 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(1603686..1605092) Campylobacter jejuni subsp. jejuni 81-176 4682418 YP_001001362.1 CDS leuB NC_008787.1 1605085 1606161 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1605085..1606161) Campylobacter jejuni subsp. jejuni 81-176 4683356 YP_001001363.1 CDS leuA NC_008787.1 1606158 1607693 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(1606158..1607693) Campylobacter jejuni subsp. jejuni 81-176 4683377 YP_001001364.1 CDS CJJ81176_0018 NC_008787.1 1608013 1608642 D hypothetical protein 1608013..1608642 Campylobacter jejuni subsp. jejuni 81-176 4682489 YP_001001365.1 CDS CJJ81176_0019 NC_008787.1 1608678 1609322 R hypothetical protein complement(1608678..1609322) Campylobacter jejuni subsp. jejuni 81-176 4683337 YP_001001366.1 CDS CJJ81176_0020 NC_008787.1 1609460 1609843 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(1609460..1609843) Campylobacter jejuni subsp. jejuni 81-176 4682180 YP_001001367.1 CDS CJJ81176_0021 NC_008787.1 1610003 1610602 D identified by match to protein family HMM PF07992; hypothetical protein 1610003..1610602 Campylobacter jejuni subsp. jejuni 81-176 4683274 YP_001001368.1 CDS metA NC_008787.1 1610607 1611488 R catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase complement(1610607..1611488) Campylobacter jejuni subsp. jejuni 81-176 4683755 YP_001001369.1 CDS metX NC_008787.1 1611571 1612842 R identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326; homoserine O-acetyltransferase complement(1611571..1612842) Campylobacter jejuni subsp. jejuni 81-176 4683013 YP_001001370.1 CDS CJJ81176_0024 NC_008787.1 1613087 1613242 R hypothetical protein complement(1613087..1613242) Campylobacter jejuni subsp. jejuni 81-176 4682712 YP_001001371.1 CDS flgE NC_008787.1 1613268 1615784 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(1613268..1615784) Campylobacter jejuni subsp. jejuni 81-176 4682758 YP_001001372.1 CDS ruvC NC_008787.1 1615977 1616459 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(1615977..1616459) Campylobacter jejuni subsp. jejuni 81-176 4683036 YP_001004005.1 CDS CJJ81176_pTet0001 NC_008790.1 66 1139 D hypothetical protein 66..1139 Campylobacter jejuni subsp. jejuni 81-176 4711580 YP_001004006.1 CDS CJJ81176_pTet0002 NC_008790.1 1313 1501 D hypothetical protein 1313..1501 Campylobacter jejuni subsp. jejuni 81-176 4711559 YP_001004007.1 CDS CJJ81176_pTet0003 NC_008790.1 1416 1796 D cpp7 1416..1796 Campylobacter jejuni subsp. jejuni 81-176 4711561 YP_001004008.1 CDS CJJ81176_pTet0004 NC_008790.1 1938 2336 D cpp8 1938..2336 Campylobacter jejuni subsp. jejuni 81-176 4711602 YP_001004009.1 CDS CJJ81176_pTet0005 NC_008790.1 2333 2845 D cpp9 2333..2845 Campylobacter jejuni subsp. jejuni 81-176 4711557 YP_001004010.1 CDS CJJ81176_pTet0006 NC_008790.1 2842 3399 D cpp10 2842..3399 Campylobacter jejuni subsp. jejuni 81-176 4711560 YP_001004011.1 CDS CJJ81176_pTet0007 NC_008790.1 3404 3670 D cpp11 3404..3670 Campylobacter jejuni subsp. jejuni 81-176 4711563 YP_001004012.1 CDS CJJ81176_pTet0008 NC_008790.1 3729 4289 D cpp12 3729..4289 Campylobacter jejuni subsp. jejuni 81-176 4711605 YP_001004013.1 CDS CJJ81176_pTet0009 NC_008790.1 4292 4558 D cpp13 4292..4558 Campylobacter jejuni subsp. jejuni 81-176 4711569 YP_001004014.1 CDS CJJ81176_pTet0010 NC_008790.1 4605 10403 D identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF02384; match to protein family HMM PF04851; cpp14 4605..10403 Campylobacter jejuni subsp. jejuni 81-176 4711562 YP_001004015.1 CDS CJJ81176_pTet0011 NC_008790.1 10425 11129 R cpp16 complement(10425..11129) Campylobacter jejuni subsp. jejuni 81-176 4711571 YP_001004016.1 CDS CJJ81176_pTet0012 NC_008790.1 11155 12543 R cpp17 complement(11155..12543) Campylobacter jejuni subsp. jejuni 81-176 4711606 YP_001004017.1 CDS CJJ81176_pTet0013 NC_008790.1 12543 13094 R cpp18 complement(12543..13094) Campylobacter jejuni subsp. jejuni 81-176 4711568 YP_001004018.1 CDS CJJ81176_pTet0014 NC_008790.1 13295 13576 D cpp19 13295..13576 Campylobacter jejuni subsp. jejuni 81-176 4711564 YP_001004019.1 CDS CJJ81176_pTet0015 NC_008790.1 13605 14216 D cpp20 13605..14216 Campylobacter jejuni subsp. jejuni 81-176 4711572 YP_001004020.1 CDS CJJ81176_pTet0016 NC_008790.1 14220 14873 D cpp21 14220..14873 Campylobacter jejuni subsp. jejuni 81-176 4711608 YP_001004021.1 CDS CJJ81176_pTet0017 NC_008790.1 14992 16218 D cpp22 14992..16218 Campylobacter jejuni subsp. jejuni 81-176 4711573 YP_001004022.1 CDS CJJ81176_pTet0018 NC_008790.1 16326 16589 D cpp23 16326..16589 Campylobacter jejuni subsp. jejuni 81-176 4711567 YP_001004023.1 CDS CJJ81176_pTet0019 NC_008790.1 16811 17068 R hypothetical protein complement(16811..17068) Campylobacter jejuni subsp. jejuni 81-176 4711574 YP_001004024.1 CDS CJJ81176_pTet0020 NC_008790.1 17102 17287 R hypothetical protein complement(17102..17287) Campylobacter jejuni subsp. jejuni 81-176 4711607 YP_001004025.1 CDS CJJ81176_pTet0021 NC_008790.1 17560 17778 D identified by match to protein family HMM PF03681; hypothetical protein 17560..17778 Campylobacter jejuni subsp. jejuni 81-176 4711575 YP_001004026.1 CDS CJJ81176_pTet0022 NC_008790.1 17771 17974 D identified by match to protein family HMM PF07927; hypothetical protein 17771..17974 Campylobacter jejuni subsp. jejuni 81-176 4711565 YP_001004027.1 CDS CJJ81176_pTet0023 NC_008790.1 17978 19771 D cpp26 17978..19771 Campylobacter jejuni subsp. jejuni 81-176 4711558 YP_001004028.1 CDS CJJ81176_pTet0024 NC_008790.1 19894 20508 R identified by match to protein family HMM PF00239; cpp27 complement(19894..20508) Campylobacter jejuni subsp. jejuni 81-176 4711603 YP_001004029.1 CDS CJJ81176_pTet0025 NC_008790.1 20505 20882 R hypothetical protein complement(20505..20882) Campylobacter jejuni subsp. jejuni 81-176 4711577 YP_001004030.1 CDS CJJ81176_pTet0026 NC_008790.1 20873 21196 R cpp29 complement(20873..21196) Campylobacter jejuni subsp. jejuni 81-176 4711570 YP_001004031.1 CDS CJJ81176_pTet0027 NC_008790.1 21367 21630 D cmgB2 21367..21630 Campylobacter jejuni subsp. jejuni 81-176 4711576 YP_001004032.1 CDS CJJ81176_pTet0028 NC_008790.1 21643 24411 D identified by match to protein family HMM PF03135; match to protein family HMM PF05101; cmgB3/4 21643..24411 Campylobacter jejuni subsp. jejuni 81-176 4711578 YP_001004033.1 CDS CJJ81176_pTet0029 NC_008790.1 24422 24988 D identified by match to protein family HMM TIGR02681; cpp32 24422..24988 Campylobacter jejuni subsp. jejuni 81-176 4711585 YP_001004034.1 CDS CJJ81176_pTet0030 NC_008790.1 24985 25650 D cpp33 24985..25650 Campylobacter jejuni subsp. jejuni 81-176 4711601 YP_001004035.1 CDS CJJ81176_pTet0031 NC_008790.1 25684 26109 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein family 25684..26109 Campylobacter jejuni subsp. jejuni 81-176 4711586 YP_001004036.1 CDS CJJ81176_pTet0032 NC_008790.1 26125 26400 D cpp35 26125..26400 Campylobacter jejuni subsp. jejuni 81-176 4711566 YP_001004037.1 CDS CJJ81176_pTet0033 NC_008790.1 26404 27375 D cmgB5 26404..27375 Campylobacter jejuni subsp. jejuni 81-176 4711588 YP_001004038.1 CDS CJJ81176_pTet0034 NC_008790.1 27372 28370 D identified by match to protein family HMM PF04610; cmgB6 27372..28370 Campylobacter jejuni subsp. jejuni 81-176 4711599 YP_001004039.1 CDS CJJ81176_pTet0035 NC_008790.1 28360 28527 D hypothetical protein 28360..28527 Campylobacter jejuni subsp. jejuni 81-176 4711581 YP_001004040.1 CDS CJJ81176_pTet0036 NC_008790.1 28517 29179 D identified by match to protein family HMM PF04335; cmgB8 28517..29179 Campylobacter jejuni subsp. jejuni 81-176 4711579 YP_001004041.1 CDS CJJ81176_pTet0037 NC_008790.1 29176 30063 D identified by match to protein family HMM PF03524; match to protein family HMM TIGR02781; cmgB9 29176..30063 Campylobacter jejuni subsp. jejuni 81-176 4711589 YP_001004042.1 CDS CJJ81176_pTet0038 NC_008790.1 30090 31265 D identified by match to protein family HMM PF03743; cmgB10 30090..31265 Campylobacter jejuni subsp. jejuni 81-176 4711600 YP_001004043.1 CDS CJJ81176_pTet0039 NC_008790.1 31246 32238 D identified by match to protein family HMM PF00437; match to protein family HMM TIGR02788; cmgB11 31246..32238 Campylobacter jejuni subsp. jejuni 81-176 4711582 YP_001004044.1 CDS CJJ81176_pTet0040 NC_008790.1 32239 34050 D identified by match to protein family HMM PF02534; cmgD4 32239..34050 Campylobacter jejuni subsp. jejuni 81-176 4711590 YP_001004045.1 CDS CJJ81176_pTet0041 NC_008790.1 34031 34468 D cpp44 34031..34468 Campylobacter jejuni subsp. jejuni 81-176 4711583 YP_001004046.1 CDS CJJ81176_pTet0042 NC_008790.1 34480 35244 D identified by match to protein family HMM PF07424; cpp45 34480..35244 Campylobacter jejuni subsp. jejuni 81-176 4711604 YP_001004047.1 CDS CJJ81176_pTet0043 NC_008790.1 35247 36044 D cpp46 35247..36044 Campylobacter jejuni subsp. jejuni 81-176 4711592 YP_001004048.1 CDS CJJ81176_pTet0044 NC_008790.1 36115 36735 D cpp47 36115..36735 Campylobacter jejuni subsp. jejuni 81-176 4711584 YP_001004049.1 CDS CJJ81176_pTet0045 NC_008790.1 36999 39191 D identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01056; DNA topoisomerase III 36999..39191 Campylobacter jejuni subsp. jejuni 81-176 4711593 YP_001004050.1 CDS CJJ81176_pTet0046 NC_008790.1 39297 40718 D cpp50 39297..40718 Campylobacter jejuni subsp. jejuni 81-176 4711596 YP_001004051.1 CDS CJJ81176_pTet0047 NC_008790.1 40737 40916 D hypothetical protein 40737..40916 Campylobacter jejuni subsp. jejuni 81-176 4711591 YP_001004052.1 CDS CJJ81176_pTet0048 NC_008790.1 41275 43194 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; tetO 41275..43194 Campylobacter jejuni subsp. jejuni 81-176 4711598 YP_001004053.1 CDS CJJ81176_pTet0049 NC_008790.1 43589 43771 D hypothetical protein 43589..43771 Campylobacter jejuni subsp. jejuni 81-176 4711594 YP_001004054.1 CDS CJJ81176_pTet0050 NC_008790.1 43962 44285 D hypothetical protein 43962..44285 Campylobacter jejuni subsp. jejuni 81-176 4711587 YP_001004055.1 CDS CJJ81176_pTet0051 NC_008790.1 44244 44600 R hypothetical protein complement(44244..44600) Campylobacter jejuni subsp. jejuni 81-176 4711595 YP_001004056.1 CDS CJJ81176_pTet0052 NC_008790.1 44772 45002 D cpp4 44772..45002 Campylobacter jejuni subsp. jejuni 81-176 4711597 CJJ81176_1705 tRNA CJJ81176_1705 NC_008787.1 40772 40847 D tRNA-Ala 40772..40847 Campylobacter jejuni subsp. jejuni 81-176 4682232 CJJ81176_1706 tRNA CJJ81176_1706 NC_008787.1 40856 40932 D tRNA-Ile 40856..40932 Campylobacter jejuni subsp. jejuni 81-176 4682289 CJJ81176_1710 tRNA CJJ81176_1710 NC_008787.1 176501 176575 D tRNA-Glu 176501..176575 Campylobacter jejuni subsp. jejuni 81-176 4682083 CJJ81176_1712 tRNA CJJ81176_1712 NC_008787.1 397380 397455 D tRNA-Ala 397380..397455 Campylobacter jejuni subsp. jejuni 81-176 4683181 CJJ81176_1713 tRNA CJJ81176_1713 NC_008787.1 397464 397540 D tRNA-Ile 397464..397540 Campylobacter jejuni subsp. jejuni 81-176 4683624 CJJ81176_1716 tRNA CJJ81176_1716 NC_008787.1 435539 435614 D tRNA-Thr 435539..435614 Campylobacter jejuni subsp. jejuni 81-176 4683115 CJJ81176_1717 tRNA CJJ81176_1717 NC_008787.1 435664 435749 D tRNA-Tyr 435664..435749 Campylobacter jejuni subsp. jejuni 81-176 4682133 CJJ81176_1718 tRNA CJJ81176_1718 NC_008787.1 435756 435832 D tRNA-Gly 435756..435832 Campylobacter jejuni subsp. jejuni 81-176 4683667 CJJ81176_1719 tRNA CJJ81176_1719 NC_008787.1 435937 436011 D tRNA-Thr 435937..436011 Campylobacter jejuni subsp. jejuni 81-176 4682474 CJJ81176_1720 tRNA CJJ81176_1720 NC_008787.1 437503 437578 D tRNA-Trp 437503..437578 Campylobacter jejuni subsp. jejuni 81-176 4683350 CJJ81176_1721 tRNA CJJ81176_1721 NC_008787.1 452510 452586 D tRNA-Arg 452510..452586 Campylobacter jejuni subsp. jejuni 81-176 4683639 CJJ81176_1722 tRNA CJJ81176_1722 NC_008787.1 529985 530060 R tRNA-Met complement(529985..530060) Campylobacter jejuni subsp. jejuni 81-176 4683288 CJJ81176_1723 tRNA CJJ81176_1723 NC_008787.1 530095 530169 R tRNA-Gln complement(530095..530169) Campylobacter jejuni subsp. jejuni 81-176 4682490 CJJ81176_1725 tRNA CJJ81176_1725 NC_008787.1 694530 694605 D tRNA-Ala 694530..694605 Campylobacter jejuni subsp. jejuni 81-176 4682592 CJJ81176_1726 tRNA CJJ81176_1726 NC_008787.1 694614 694690 D tRNA-Ile 694614..694690 Campylobacter jejuni subsp. jejuni 81-176 4682495 CJJ81176_1729 tRNA CJJ81176_1729 NC_008787.1 826544 826630 D tRNA-Leu 826544..826630 Campylobacter jejuni subsp. jejuni 81-176 4683024 CJJ81176_1730 tRNA CJJ81176_1730 NC_008787.1 826641 826715 D tRNA-Gly 826641..826715 Campylobacter jejuni subsp. jejuni 81-176 4682440 CJJ81176_1733 tRNA CJJ81176_1733 NC_008787.1 873371 873456 D tRNA-Leu 873371..873456 Campylobacter jejuni subsp. jejuni 81-176 4682879 CJJ81176_1734 tRNA CJJ81176_1734 NC_008787.1 884541 884617 R tRNA-Asp complement(884541..884617) Campylobacter jejuni subsp. jejuni 81-176 4683123 CJJ81176_1735 tRNA CJJ81176_1735 NC_008787.1 884669 884744 R tRNA-Val complement(884669..884744) Campylobacter jejuni subsp. jejuni 81-176 4682553 CJJ81176_1736 tRNA CJJ81176_1736 NC_008787.1 884751 884826 R tRNA-Arg complement(884751..884826) Campylobacter jejuni subsp. jejuni 81-176 4683537 CJJ81176_1737 tRNA CJJ81176_1737 NC_008787.1 884846 884921 R tRNA-Lys complement(884846..884921) Campylobacter jejuni subsp. jejuni 81-176 4682627 CJJ81176_1738 tRNA CJJ81176_1738 NC_008787.1 884926 885002 R tRNA-Asp complement(884926..885002) Campylobacter jejuni subsp. jejuni 81-176 4682532 CJJ81176_1739 tRNA CJJ81176_1739 NC_008787.1 885054 885129 R tRNA-Val complement(885054..885129) Campylobacter jejuni subsp. jejuni 81-176 4682624 CJJ81176_1740 tRNA CJJ81176_1740 NC_008787.1 885137 885212 R tRNA-Lys complement(885137..885212) Campylobacter jejuni subsp. jejuni 81-176 4682415 CJJ81176_1745 tRNA CJJ81176_1745 NC_008787.1 950203 950279 D tRNA-Arg 950203..950279 Campylobacter jejuni subsp. jejuni 81-176 4682090 CJJ81176_1748 tRNA CJJ81176_1748 NC_008787.1 1155761 1155835 R tRNA-Asn complement(1155761..1155835) Campylobacter jejuni subsp. jejuni 81-176 4682834 CJJ81176_1749 tRNA CJJ81176_1749 NC_008787.1 1216715 1216791 D tRNA-Met 1216715..1216791 Campylobacter jejuni subsp. jejuni 81-176 4682376 CJJ81176_1750 tRNA CJJ81176_1750 NC_008787.1 1216899 1216974 R tRNA-Phe complement(1216899..1216974) Campylobacter jejuni subsp. jejuni 81-176 4682645 CJJ81176_1751 tRNA CJJ81176_1751 NC_008787.1 1272697 1272786 R tRNA-Ser complement(1272697..1272786) Campylobacter jejuni subsp. jejuni 81-176 4682346 CJJ81176_1753 tRNA CJJ81176_1753 NC_008787.1 1410464 1410561 R tRNA-Sec complement(1410464..1410561) Campylobacter jejuni subsp. jejuni 81-176 4683213 CJJ81176_1755 tRNA CJJ81176_1755 NC_008787.1 1526199 1526273 D tRNA-Gly 1526199..1526273 Campylobacter jejuni subsp. jejuni 81-176 4683303 CJJ81176_1756 tRNA CJJ81176_1756 NC_008787.1 1526283 1526371 D tRNA-Leu 1526283..1526371 Campylobacter jejuni subsp. jejuni 81-176 4683048 CJJ81176_1757 tRNA CJJ81176_1757 NC_008787.1 1526390 1526463 D tRNA-Cys 1526390..1526463 Campylobacter jejuni subsp. jejuni 81-176 4682157 CJJ81176_1758 tRNA CJJ81176_1758 NC_008787.1 1526485 1526572 D tRNA-Ser 1526485..1526572 Campylobacter jejuni subsp. jejuni 81-176 4682628 CJJ81176_1759 tRNA CJJ81176_1759 NC_008787.1 1566871 1566955 R tRNA-Leu complement(1566871..1566955) Campylobacter jejuni subsp. jejuni 81-176 4682350 CJJ81176_1760 tRNA CJJ81176_1760 NC_008787.1 1566961 1567037 R tRNA-Arg complement(1566961..1567037) Campylobacter jejuni subsp. jejuni 81-176 4682469 CJJ81176_1761 tRNA CJJ81176_1761 NC_008787.1 1567052 1567128 R tRNA-Arg complement(1567052..1567128) Campylobacter jejuni subsp. jejuni 81-176 4682600 CJJ81176_1762 tRNA CJJ81176_1762 NC_008787.1 1567133 1567209 R tRNA-His complement(1567133..1567209) Campylobacter jejuni subsp. jejuni 81-176 4682609 CJJ81176_1763 tRNA CJJ81176_1763 NC_008787.1 1567234 1567311 R tRNA-Pro complement(1567234..1567311) Campylobacter jejuni subsp. jejuni 81-176 4682514 CJJ81176_1764 tRNA CJJ81176_1764 NC_008787.1 1600884 1600960 R tRNA-Met complement(1600884..1600960) Campylobacter jejuni subsp. jejuni 81-176 4682513 CJJ81176_1765 tRNA CJJ81176_1765 NC_008787.1 1601096 1601183 D tRNA-Ser 1601096..1601183 Campylobacter jejuni subsp. jejuni 81-176 4682766 CJJ81176_1766 tRNA CJJ81176_1766 NC_008787.1 1602390 1602465 D tRNA-Ala 1602390..1602465 Campylobacter jejuni subsp. jejuni 81-176 4683693 CJJ81176_1767 tRNA CJJ81176_1767 NC_008787.1 1602469 1602544 D tRNA-Val 1602469..1602544 Campylobacter jejuni subsp. jejuni 81-176 4682243 CJJ81176_1704 rRNA rrsA NC_008787.1 39155 40667 D 16S ribosomal RNA 39155..40667 Campylobacter jejuni subsp. jejuni 81-176 4682197 CJJ81176_1707 rRNA rrlA NC_008787.1 41409 44443 D 23S ribosomal RNA join(41409..42607,42705..44443) Campylobacter jejuni subsp. jejuni 81-176 4682114 CJJ81176_1708 rRNA rrfA NC_008787.1 44720 44839 D 5S ribosomal RNA 44720..44839 Campylobacter jejuni subsp. jejuni 81-176 4683099 CJJ81176_1711 rRNA rrsB NC_008787.1 395765 397275 D 16S ribosomal RNA 395765..397275 Campylobacter jejuni subsp. jejuni 81-176 4682482 CJJ81176_1714 rRNA rrlB NC_008787.1 398017 401052 D 23S ribosomal RNA join(398017..399217,399315..401052) Campylobacter jejuni subsp. jejuni 81-176 4683496 CJJ81176_1715 rRNA rrfB NC_008787.1 401329 401448 D 5S ribosomal RNA 401329..401448 Campylobacter jejuni subsp. jejuni 81-176 4683414 CJJ81176_1724 rRNA rrsC NC_008787.1 692913 694425 D 16S ribosomal RNA 692913..694425 Campylobacter jejuni subsp. jejuni 81-176 4682206 CJJ81176_1727 rRNA rrlC NC_008787.1 695167 698203 D 23S ribosomal RNA join(695167..696367,696465..698203) Campylobacter jejuni subsp. jejuni 81-176 4682473 CJJ81176_1728 rRNA rrfC NC_008787.1 698480 698599 D 5S ribosomal RNA 698480..698599 Campylobacter jejuni subsp. jejuni 81-176 4682868