-- dump date 20140619_021704 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_980060.1 121582658 4682029 1..678 1 NC_008770.1 identified by match to protein family HMM PF04335; VirB8 678 4682029 CJJ81176_pVir0001 Campylobacter jejuni subsp. jejuni 81-176 VirB8 YP_980060.1 1 D 354242 CDS YP_980061.1 121582659 4682030 678..1748 1 NC_008770.1 identified by match to protein family HMM PF03524; VirB9 1748 4682030 CJJ81176_pVir0002 Campylobacter jejuni subsp. jejuni 81-176 VirB9 YP_980061.1 678 D 354242 CDS YP_980062.1 121582660 4682041 1745..2881 1 NC_008770.1 identified by match to protein family HMM PF03743; VirB10 2881 4682041 CJJ81176_pVir0003 Campylobacter jejuni subsp. jejuni 81-176 VirB10 YP_980062.1 1745 D 354242 CDS YP_980063.1 121582661 4682037 2892..3092 1 NC_008770.1 hypothetical protein 3092 4682037 CJJ81176_pVir0004 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980063.1 2892 D 354242 CDS YP_980064.1 121582662 4682040 3085..4038 1 NC_008770.1 identified by match to protein family HMM PF00437; conjugative transfer regulon protein 4038 trbB 4682040 trbB Campylobacter jejuni subsp. jejuni 81-176 conjugative transfer regulon protein YP_980064.1 3085 D 354242 CDS YP_980065.1 121582663 4682045 4048..4455 1 NC_008770.1 hypothetical protein 4455 4682045 CJJ81176_pVir0006 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980065.1 4048 D 354242 CDS YP_980066.1 121582664 4682063 4452..6338 1 NC_008770.1 identified by match to protein family HMM PF02534; hypothetical protein 6338 4682063 CJJ81176_pVir0007 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980066.1 4452 D 354242 CDS YP_980067.1 121582665 4682055 6457..6627 1 NC_008770.1 hypothetical protein 6627 4682055 CJJ81176_pVir0008 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980067.1 6457 D 354242 CDS YP_980068.1 121582666 4682071 6702..7583 1 NC_008770.1 hypothetical protein 7583 4682071 CJJ81176_pVir0009 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980068.1 6702 D 354242 CDS YP_980069.1 121582667 4682035 7728..7997 1 NC_008770.1 hypothetical protein 7997 4682035 CJJ81176_pVir0010 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980069.1 7728 D 354242 CDS YP_980070.1 121582668 4682031 8007..9155 1 NC_008770.1 hypothetical protein 9155 4682031 CJJ81176_pVir0011 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980070.1 8007 D 354242 CDS YP_980071.1 121582669 4682044 9177..11144 1 NC_008770.1 identified by match to protein family HMM PF01131; match to protein family HMM PF01751; DNA topoisomerase I 11144 4682044 CJJ81176_pVir0012 Campylobacter jejuni subsp. jejuni 81-176 DNA topoisomerase I YP_980071.1 9177 D 354242 CDS YP_980072.1 121582670 4682038 11351..11716 1 NC_008770.1 hypothetical protein 11716 4682038 CJJ81176_pVir0013 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980072.1 11351 D 354242 CDS YP_980073.1 121582671 4682061 11732..12190 1 NC_008770.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; hypothetical protein 12190 4682061 CJJ81176_pVir0014 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980073.1 11732 D 354242 CDS YP_980074.1 121582672 4682039 12326..12499 1 NC_008770.1 hypothetical protein 12499 4682039 CJJ81176_pVir0015 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980074.1 12326 D 354242 CDS YP_980075.1 121582673 4682054 12550..13122 1 NC_008770.1 hypothetical protein 13122 4682054 CJJ81176_pVir0016 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980075.1 12550 D 354242 CDS YP_980076.1 121582674 4682062 13085..13564 1 NC_008770.1 hypothetical protein 13564 4682062 CJJ81176_pVir0017 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980076.1 13085 D 354242 CDS YP_980077.1 121582675 4682078 13589..13942 1 NC_008770.1 hypothetical protein 13942 4682078 CJJ81176_pVir0018 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980077.1 13589 D 354242 CDS YP_980078.1 121582676 4682050 13932..14057 1 NC_008770.1 hypothetical protein 14057 4682050 CJJ81176_pVir0019 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980078.1 13932 D 354242 CDS YP_980079.1 121582677 4682070 14157..14702 1 NC_008770.1 hypothetical protein 14702 4682070 CJJ81176_pVir0020 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980079.1 14157 D 354242 CDS YP_980080.1 121582678 4682058 14699..15112 1 NC_008770.1 hypothetical protein 15112 4682058 CJJ81176_pVir0021 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980080.1 14699 D 354242 CDS YP_980081.1 121582679 4682043 15109..15516 1 NC_008770.1 hypothetical protein 15516 4682043 CJJ81176_pVir0022 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980081.1 15109 D 354242 CDS YP_980082.1 121582680 4682034 15527..15850 1 NC_008770.1 hypothetical protein 15850 4682034 CJJ81176_pVir0023 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980082.1 15527 D 354242 CDS YP_980083.1 121582681 4682052 15919..16152 1 NC_008770.1 hypothetical protein 16152 4682052 CJJ81176_pVir0024 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980083.1 15919 D 354242 CDS YP_980084.1 121582682 4682036 16642..17310 1 NC_008770.1 identified by match to protein family HMM PF01656; para protein 17310 4682036 CJJ81176_pVir0025 Campylobacter jejuni subsp. jejuni 81-176 para protein YP_980084.1 16642 D 354242 CDS YP_980085.1 121582683 4682069 17320..17949 1 NC_008770.1 hypothetical protein 17949 4682069 CJJ81176_pVir0026 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980085.1 17320 D 354242 CDS YP_980086.1 121582684 4682076 complement(17973..18809) 1 NC_008770.1 identified by match to protein family HMM PF01051; RepE replication protein, putative 18809 4682076 CJJ81176_pVir0027 Campylobacter jejuni subsp. jejuni 81-176 RepE replication protein, putative YP_980086.1 17973 R 354242 CDS YP_980087.1 121582685 4682072 19930..21051 1 NC_008770.1 hypothetical protein 21051 4682072 CJJ81176_pVir0028 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980087.1 19930 D 354242 CDS YP_980088.1 121582686 4682047 21048..21926 1 NC_008770.1 hypothetical protein 21926 4682047 CJJ81176_pVir0029 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980088.1 21048 D 354242 CDS YP_980089.1 121582687 4682057 22030..22812 1 NC_008770.1 identified by match to protein family HMM PF07424; cpp45 22812 4682057 CJJ81176_pVir0030 Campylobacter jejuni subsp. jejuni 81-176 cpp45 YP_980089.1 22030 D 354242 CDS YP_980090.1 121582688 4682042 22843..23562 1 NC_008770.1 hypothetical protein 23562 4682042 CJJ81176_pVir0031 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980090.1 22843 D 354242 CDS YP_980091.1 121582689 4682028 23562..24815 1 NC_008770.1 hypothetical protein 24815 4682028 CJJ81176_pVir0032 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980091.1 23562 D 354242 CDS YP_980092.1 121582690 4682051 24799..25227 1 NC_008770.1 hypothetical protein 25227 4682051 CJJ81176_pVir0033 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980092.1 24799 D 354242 CDS YP_980093.1 121582691 4682032 complement(25484..25609) 1 NC_008770.1 hypothetical protein 25609 4682032 CJJ81176_pVir0034 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980093.1 25484 R 354242 CDS YP_980094.1 121582692 4682027 25704..26048 1 NC_008770.1 hypothetical protein 26048 4682027 CJJ81176_pVir0035 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980094.1 25704 D 354242 CDS YP_980095.1 121582693 4682048 26062..26370 1 NC_008770.1 hypothetical protein 26370 4682048 CJJ81176_pVir0036 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980095.1 26062 D 354242 CDS YP_980096.1 121582694 4682056 26380..26601 1 NC_008770.1 hypothetical protein 26601 4682056 CJJ81176_pVir0037 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980096.1 26380 D 354242 CDS YP_980097.1 121582695 4682066 26614..27009 1 NC_008770.1 pTet39 27009 4682066 CJJ81176_pVir0038 Campylobacter jejuni subsp. jejuni 81-176 pTet39 YP_980097.1 26614 D 354242 CDS YP_980098.1 121582696 4682059 27082..27492 1 NC_008770.1 hypothetical protein 27492 4682059 CJJ81176_pVir0039 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980098.1 27082 D 354242 CDS YP_980099.1 121582697 4682079 27489..27920 1 NC_008770.1 hypothetical protein 27920 4682079 CJJ81176_pVir0040 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980099.1 27489 D 354242 CDS YP_980100.1 121582698 4682060 28128..28313 1 NC_008770.1 hypothetical protein 28313 4682060 CJJ81176_pVir0041 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980100.1 28128 D 354242 CDS YP_980101.1 121582699 4682075 28325..28495 1 NC_008770.1 hypothetical protein 28495 4682075 CJJ81176_pVir0042 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980101.1 28325 D 354242 CDS YP_980102.1 121582700 4682065 28575..28703 1 NC_008770.1 hypothetical protein 28703 4682065 CJJ81176_pVir0043 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980102.1 28575 D 354242 CDS YP_980103.1 121582701 4682049 29105..29470 1 NC_008770.1 hypothetical protein 29470 4682049 CJJ81176_pVir0044 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980103.1 29105 D 354242 CDS YP_980104.1 121582702 4682053 29507..29842 1 NC_008770.1 hypothetical protein 29842 4682053 CJJ81176_pVir0045 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980104.1 29507 D 354242 CDS YP_980105.1 121582703 4682046 30039..30401 1 NC_008770.1 hypothetical protein 30401 4682046 CJJ81176_pVir0046 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980105.1 30039 D 354242 CDS YP_980106.1 121582704 4682073 30634..31038 1 NC_008770.1 hypothetical protein 31038 4682073 CJJ81176_pVir0047 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980106.1 30634 D 354242 CDS YP_980107.1 121582705 4682067 31284..31676 1 NC_008770.1 hypothetical protein 31676 4682067 CJJ81176_pVir0048 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980107.1 31284 D 354242 CDS YP_980108.1 121582706 4682064 complement(31903..33474) 1 NC_008770.1 hypothetical protein 33474 4682064 CJJ81176_pVir0049 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980108.1 31903 R 354242 CDS YP_980109.1 121582707 4682033 complement(33855..34103) 1 NC_008770.1 hypothetical protein 34103 4682033 CJJ81176_pVir0050 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980109.1 33855 R 354242 CDS YP_980110.1 121582708 4682074 34305..34610 1 NC_008770.1 hypothetical protein 34610 4682074 CJJ81176_pVir0051 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980110.1 34305 D 354242 CDS YP_980111.1 121582709 4682077 34610..34852 1 NC_008770.1 hypothetical protein 34852 4682077 CJJ81176_pVir0052 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_980111.1 34610 D 354242 CDS YP_980112.1 121582710 4682068 34862..37330 1 NC_008770.1 identified by match to protein family HMM PF03135; VirB4 37330 4682068 CJJ81176_pVir0053 Campylobacter jejuni subsp. jejuni 81-176 VirB4 YP_980112.1 34862 D 354242 CDS YP_999720.1 121612751 4682521 1..1323 1 NC_008787.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1323 dnaA 4682521 dnaA Campylobacter jejuni subsp. jejuni 81-176 chromosomal replication initiation protein YP_999720.1 1 D 354242 CDS YP_999721.1 121612492 4683605 1483..2550 1 NC_008787.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2550 dnaN 4683605 dnaN Campylobacter jejuni subsp. jejuni 81-176 DNA polymerase III subunit beta YP_999721.1 1483 D 354242 CDS YP_999722.1 121612557 4683674 2579..4888 1 NC_008787.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4888 gyrB 4683674 gyrB Campylobacter jejuni subsp. jejuni 81-176 DNA gyrase subunit B YP_999722.1 2579 D 354242 CDS YP_999723.1 121612266 4682941 complement(4914..5255) 1 NC_008787.1 hypothetical protein 5255 4682941 CJJ81176_0030 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999723.1 4914 R 354242 CDS YP_999724.1 121613203 4682486 complement(5258..6496) 1 NC_008787.1 identified by match to protein family HMM PF00174; match to protein family HMM PF03404; molybdopterin oxidoreductase family protein 6496 4682486 CJJ81176_0031 Campylobacter jejuni subsp. jejuni 81-176 molybdopterin oxidoreductase family protein YP_999724.1 5258 R 354242 CDS YP_999725.1 121612732 4683052 6707..8008 1 NC_008787.1 identified by match to protein family HMM PF03553; match to protein family HMM PF03600; match to protein family HMM PF06808; Na+/H+ antiporter family protein 8008 4683052 CJJ81176_0032 Campylobacter jejuni subsp. jejuni 81-176 Na+/H+ antiporter family protein YP_999725.1 6707 D 354242 CDS YP_999726.1 121613706 4683618 8142..12629 1 NC_008787.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; glutamate synthase, large subunit 12629 gltB 4683618 gltB Campylobacter jejuni subsp. jejuni 81-176 glutamate synthase, large subunit YP_999726.1 8142 D 354242 CDS YP_999727.1 121612537 4682218 12649..14370 1 NC_008787.1 identified by match to protein family HMM PF03235; match to protein family HMM PF07510; hypothetical protein 14370 4682218 CJJ81176_0034 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999727.1 12649 D 354242 CDS YP_999728.1 121613542 4683174 14381..15826 1 NC_008787.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 15826 gltD 4683174 gltD Campylobacter jejuni subsp. jejuni 81-176 glutamate synthase subunit beta YP_999728.1 14381 D 354242 CDS YP_999729.1 121612583 4682106 complement(15827..16402) 1 NC_008787.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 16402 rnhB 4682106 rnhB Campylobacter jejuni subsp. jejuni 81-176 ribonuclease HII YP_999729.1 15827 R 354242 CDS YP_999730.1 121613207 4682587 complement(16435..16674) 1 NC_008787.1 identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; competence protein ComEA 16674 comEA 4682587 comEA Campylobacter jejuni subsp. jejuni 81-176 competence protein ComEA YP_999730.1 16435 R 354242 CDS YP_999731.1 121612692 4683039 complement(16739..17290) 1 NC_008787.1 identified by match to protein family HMM PF00301; match to protein family HMM PF02915; rubrerythrin 17290 rbr 4683039 rbr Campylobacter jejuni subsp. jejuni 81-176 rubrerythrin YP_999731.1 16739 R 354242 CDS YP_999732.1 121613697 4683668 17546..19222 1 NC_008787.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 19222 ilvD 4683668 ilvD Campylobacter jejuni subsp. jejuni 81-176 dihydroxy-acid dehydratase YP_999732.1 17546 D 354242 CDS YP_999733.1 121612806 4682377 complement(19234..19383) 1 NC_008787.1 inner membrane protein YagU 19383 4682377 CJJ81176_0040 Campylobacter jejuni subsp. jejuni 81-176 inner membrane protein YagU YP_999733.1 19234 R 354242 CDS YP_999734.1 121612314 4683523 complement(19349..19630) 1 NC_008787.1 membrane protein, putative, degenerate 19630 4683523 CJJ81176_0041 Campylobacter jejuni subsp. jejuni 81-176 membrane protein, putative, degenerate YP_999734.1 19349 R 354242 CDS YP_999735.1 121613008 4682389 complement(19722..20948) 1 NC_008787.1 hypothetical protein 20948 4682389 CJJ81176_0042 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999735.1 19722 R 354242 CDS YP_999736.1 121612477 4683326 21025..21699 1 NC_008787.1 identified by match to protein family HMM PF02568; match to protein family HMM PF06508; match to protein family HMM TIGR00364; exsB protein 21699 4683326 CJJ81176_0043 Campylobacter jejuni subsp. jejuni 81-176 exsB protein YP_999736.1 21025 D 354242 CDS YP_999737.1 121613521 4682788 complement(21720..23246) 1 NC_008787.1 identified by match to protein family HMM PF02600; DsbB family disulfide bond formation protein 23246 4682788 CJJ81176_0044 Campylobacter jejuni subsp. jejuni 81-176 DsbB family disulfide bond formation protein YP_999737.1 21720 R 354242 CDS YP_999738.1 121613284 4682091 complement(23258..23425) 1 NC_008787.1 hypothetical protein 23425 4682091 CJJ81176_0045 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999738.1 23258 R 354242 CDS YP_999739.1 121612100 4682958 complement(23531..25285) 1 NC_008787.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 25285 4682958 CJJ81176_0046 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_999739.1 23531 R 354242 CDS YP_999740.1 121612556 4682359 complement(25299..26213) 1 NC_008787.1 identified by match to protein family HMM PF03150; cytochrome c551 peroxidase 26213 ccpA-1 4682359 ccpA-1 Campylobacter jejuni subsp. jejuni 81-176 cytochrome c551 peroxidase YP_999740.1 25299 R 354242 CDS YP_999741.1 121612391 4682940 complement(26277..27155) 1 NC_008787.1 identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase family protein 27155 4682940 CJJ81176_0048 Campylobacter jejuni subsp. jejuni 81-176 fumarylacetoacetate hydrolase family protein YP_999741.1 26277 R 354242 CDS YP_999742.1 121613293 4682257 complement(27267..28169) 1 NC_008787.1 identified by match to protein family HMM PF00849; RNA pseudouridine synthase family protein 28169 4682257 CJJ81176_0049 Campylobacter jejuni subsp. jejuni 81-176 RNA pseudouridine synthase family protein YP_999742.1 27267 R 354242 CDS YP_999743.1 121612216 4682961 28247..29575 1 NC_008787.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 29575 purB-1 4682961 purB-1 Campylobacter jejuni subsp. jejuni 81-176 adenylosuccinate lyase YP_999743.1 28247 D 354242 CDS YP_999744.1 121613048 4682595 29591..31960 1 NC_008787.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 31960 nrdA 4682595 nrdA Campylobacter jejuni subsp. jejuni 81-176 ribonucleotide-diphosphate reductase subunit alpha YP_999744.1 29591 D 354242 CDS YP_999745.1 121612756 4683224 complement(31999..33384) 1 NC_008787.1 identified by match to protein family HMM PF00375; sodium/dicarboxylate symporter 33384 4683224 CJJ81176_0052 Campylobacter jejuni subsp. jejuni 81-176 sodium/dicarboxylate symporter YP_999745.1 31999 R 354242 CDS YP_999746.1 121613393 4683598 complement(33504..34127) 1 NC_008787.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 34127 thyX 4683598 thyX Campylobacter jejuni subsp. jejuni 81-176 FAD-dependent thymidylate synthase YP_999746.1 33504 R 354242 CDS YP_999747.1 121612860 4682821 34247..35878 1 NC_008787.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 35878 pyrG 4682821 pyrG Campylobacter jejuni subsp. jejuni 81-176 CTP synthetase YP_999747.1 34247 D 354242 CDS YP_999748.1 121612339 4683476 35865..37436 1 NC_008787.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 37436 recJ 4683476 recJ Campylobacter jejuni subsp. jejuni 81-176 single-stranded-DNA-specific exonuclease RecJ YP_999748.1 35865 D 354242 CDS YP_999749.1 121612621 4682336 37522..38568 1 NC_008787.1 identified by match to protein family HMM PF00710; match to protein family HMM TIGR00520; L-asparaginase 38568 ansA 4682336 ansA Campylobacter jejuni subsp. jejuni 81-176 L-asparaginase YP_999749.1 37522 D 354242 CDS YP_999750.1 121613586 4682570 complement(44542..44694) 1 NC_008787.1 hypothetical protein 44694 4682570 CJJ81176_0061 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999750.1 44542 R 354242 CDS YP_999751.1 121612652 4682187 45264..47234 1 NC_008787.1 hypothetical protein 47234 4682187 CJJ81176_0063 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999751.1 45264 D 354242 CDS YP_999752.1 121612148 4683716 47275..49344 1 NC_008787.1 cytochrome c family protein 49344 4683716 CJJ81176_0064 Campylobacter jejuni subsp. jejuni 81-176 cytochrome c family protein YP_999752.1 47275 D 354242 CDS YP_999753.1 121612852 4682575 49388..49972 1 NC_008787.1 hypothetical protein 49972 4682575 CJJ81176_0065 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999753.1 49388 D 354242 CDS YP_999754.1 121612515 4683482 49965..52670 1 NC_008787.1 identified by match to protein family HMM PF01578; cytochrome c biogenesis protein 52670 4683482 CJJ81176_0066 Campylobacter jejuni subsp. jejuni 81-176 cytochrome c biogenesis protein YP_999754.1 49965 D 354242 CDS YP_999755.1 121613257 4683465 complement(52705..54375) 1 NC_008787.1 identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase 54375 ggt 4683465 ggt Campylobacter jejuni subsp. jejuni 81-176 gamma-glutamyltransferase YP_999755.1 52705 R 354242 CDS YP_999756.1 121612693 4682987 54605..58339 1 NC_008787.1 type II restriction-modification enzyme 58339 4682987 CJJ81176_0068 Campylobacter jejuni subsp. jejuni 81-176 type II restriction-modification enzyme YP_999756.1 54605 D 354242 CDS YP_999757.1 121613607 4683669 58339..59223 1 NC_008787.1 hypothetical protein 59223 4683669 CJJ81176_0069 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999757.1 58339 D 354242 CDS YP_999758.1 121612434 4683784 59461..60903 1 NC_008787.1 identified by match to protein family HMM PF00912; transglycosylase domain-containing protein 60903 4683784 CJJ81176_0070 Campylobacter jejuni subsp. jejuni 81-176 transglycosylase domain-containing protein YP_999758.1 59461 D 354242 CDS YP_999759.1 121613387 4682188 61018..62559 1 NC_008787.1 putative integral membrane protein 62559 4682188 CJJ81176_0071 Campylobacter jejuni subsp. jejuni 81-176 putative integral membrane protein YP_999759.1 61018 D 354242 CDS YP_999760.1 121612271 4682835 complement(62588..63289) 1 NC_008787.1 identified by match to protein family HMM PF04402; hypothetical protein 63289 4682835 CJJ81176_0072 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999760.1 62588 R 354242 CDS YP_999761.1 121613225 4682476 complement(63276..64487) 1 NC_008787.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710; Bcr/CflA subfamily drug resistance transporter 64487 4682476 CJJ81176_0073 Campylobacter jejuni subsp. jejuni 81-176 Bcr/CflA subfamily drug resistance transporter YP_999761.1 63276 R 354242 CDS YP_999762.1 121612999 4683017 64590..65939 1 NC_008787.1 hypothetical protein 65939 4683017 CJJ81176_0074 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999762.1 64590 D 354242 CDS YP_999763.1 121612292 4683293 complement(65963..67006) 1 NC_008787.1 identified by match to protein family HMM PF00034; cytochrome c family protein 67006 4683293 CJJ81176_0075 Campylobacter jejuni subsp. jejuni 81-176 cytochrome c family protein YP_999763.1 65963 R 354242 CDS YP_999764.1 121613635 4682436 complement(67184..67831) 1 NC_008787.1 hypothetical protein 67831 4682436 CJJ81176_0076 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999764.1 67184 R 354242 CDS YP_999765.1 121612682 4682678 complement(67831..69639) 1 NC_008787.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 69639 typA 4682678 typA Campylobacter jejuni subsp. jejuni 81-176 GTP-binding protein TypA YP_999765.1 67831 R 354242 CDS YP_999766.1 121612574 4683678 69774..70097 1 NC_008787.1 hypothetical protein 70097 4683678 CJJ81176_0078 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999766.1 69774 D 354242 CDS YP_999767.1 121612481 4682689 70117..71946 1 NC_008787.1 hypothetical protein 71946 4682689 CJJ81176_0079 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999767.1 70117 D 354242 CDS YP_999768.1 121613172 4683683 72000..72884 1 NC_008787.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 72884 flgD 4683683 flgD Campylobacter jejuni subsp. jejuni 81-176 flagellar basal body rod modification protein YP_999768.1 72000 D 354242 CDS YP_999769.1 121612241 4683095 72888..74525 1 NC_008787.1 identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559; flagellar hook protein 74525 flgE-1 4683095 flgE-1 Campylobacter jejuni subsp. jejuni 81-176 flagellar hook protein YP_999769.1 72888 D 354242 CDS YP_999770.1 121612936 4682778 complement(74529..76397) 1 NC_008787.1 hypothetical protein 76397 4682778 CJJ81176_0082 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999770.1 74529 R 354242 CDS YP_999771.1 121613643 4683756 complement(76682..77116) 1 NC_008787.1 identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hypothetical protein 77116 4683756 CJJ81176_0083 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999771.1 76682 R 354242 CDS YP_999772.1 121612159 4682338 77645..77764 1 NC_008787.1 hypothetical protein 77764 4682338 CJJ81176_0084 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999772.1 77645 D 354242 CDS YP_999773.1 121613331 4682617 77987..78322 1 NC_008787.1 anion transporter 78322 4682617 CJJ81176_0085 Campylobacter jejuni subsp. jejuni 81-176 anion transporter YP_999773.1 77987 D 354242 CDS YP_999774.1 121612408 4682901 78274..78453 1 NC_008787.1 anion transporter 78453 4682901 CJJ81176_0086 Campylobacter jejuni subsp. jejuni 81-176 anion transporter YP_999774.1 78274 D 354242 CDS YP_999775.1 121613497 4682224 78413..78604 1 NC_008787.1 2-oxoglutarate/malate translocator 78604 4682224 CJJ81176_0087 Campylobacter jejuni subsp. jejuni 81-176 2-oxoglutarate/malate translocator YP_999775.1 78413 D 354242 CDS YP_999776.1 121612875 4682706 78615..78782 1 NC_008787.1 anion transporter 78782 4682706 CJJ81176_0088 Campylobacter jejuni subsp. jejuni 81-176 anion transporter YP_999776.1 78615 D 354242 CDS YP_999777.1 121613645 4683441 78801..79151 1 NC_008787.1 2-oxoglutarate/malate translocator 79151 4683441 CJJ81176_0089 Campylobacter jejuni subsp. jejuni 81-176 2-oxoglutarate/malate translocator YP_999777.1 78801 D 354242 CDS YP_999778.1 121613044 4682268 complement(79179..80195) 1 NC_008787.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 80195 mnmA 4682268 mnmA Campylobacter jejuni subsp. jejuni 81-176 tRNA-specific 2-thiouridylase MnmA YP_999778.1 79179 R 354242 CDS YP_999779.1 121612195 4683236 complement(80195..80800) 1 NC_008787.1 identified by match to protein family HMM PF03641; lysine decarboxylase family protein 80800 4683236 CJJ81176_0091 Campylobacter jejuni subsp. jejuni 81-176 lysine decarboxylase family protein YP_999779.1 80195 R 354242 CDS YP_999780.1 121613153 4682642 complement(80921..81709) 1 NC_008787.1 hypothetical protein 81709 4682642 CJJ81176_0092 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999780.1 80921 R 354242 CDS YP_999781.1 121612458 4683136 complement(81723..82316) 1 NC_008787.1 hypothetical protein 82316 4683136 CJJ81176_0093 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999781.1 81723 R 354242 CDS YP_999782.1 121613168 4682151 82860..83504 1 NC_008787.1 HmcD domain-containing protein 83504 4682151 CJJ81176_0094 Campylobacter jejuni subsp. jejuni 81-176 HmcD domain-containing protein YP_999782.1 82860 D 354242 CDS YP_999783.1 121612336 4683085 83489..83692 1 NC_008787.1 peptidase family protein 83692 4683085 CJJ81176_0095 Campylobacter jejuni subsp. jejuni 81-176 peptidase family protein YP_999783.1 83489 D 354242 CDS YP_999784.1 121613047 4682345 83698..84087 1 NC_008787.1 identified by match to protein family HMM PF03412; peptidase family protein 84087 4682345 CJJ81176_0096 Campylobacter jejuni subsp. jejuni 81-176 peptidase family protein YP_999784.1 83698 D 354242 CDS YP_999785.1 121612924 4683223 complement(84136..84957) 1 NC_008787.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliY 84957 fliY 4683223 fliY Campylobacter jejuni subsp. jejuni 81-176 flagellar motor switch protein FliY YP_999785.1 84136 R 354242 CDS YP_999786.1 121613064 4683402 complement(84975..86054) 1 NC_008787.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 86054 fliM 4683402 fliM Campylobacter jejuni subsp. jejuni 81-176 flagellar motor switch protein FliM YP_999786.1 84975 R 354242 CDS YP_999787.1 121612660 4683208 complement(86054..86746) 1 NC_008787.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 86746 fliA 4683208 fliA Campylobacter jejuni subsp. jejuni 81-176 flagellar biosynthesis sigma factor YP_999787.1 86054 R 354242 CDS YP_999788.1 121613389 4683718 complement(86727..87083) 1 NC_008787.1 hypothetical protein 87083 4683718 CJJ81176_0100 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999788.1 86727 R 354242 CDS YP_999789.1 121613262 4682831 complement(87102..87968) 1 NC_008787.1 identified by match to protein family HMM PF01656; ParaA family ATPase 87968 4682831 CJJ81176_0101 Campylobacter jejuni subsp. jejuni 81-176 ParaA family ATPase YP_999789.1 87102 R 354242 CDS YP_999790.1 121613495 4682976 complement(87961..89415) 1 NC_008787.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 89415 flhF 4682976 flhF Campylobacter jejuni subsp. jejuni 81-176 flagellar biosynthesis regulator FlhF YP_999790.1 87961 R 354242 CDS YP_999791.1 121612539 4682710 complement(89425..89898) 1 NC_008787.1 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 89898 folK 4682710 folK Campylobacter jejuni subsp. jejuni 81-176 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_999791.1 89425 R 354242 CDS YP_999792.1 121612990 4683193 complement(89901..90380) 1 NC_008787.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 90380 aroQ 4683193 aroQ Campylobacter jejuni subsp. jejuni 81-176 3-dehydroquinate dehydratase YP_999792.1 89901 R 354242 CDS YP_999793.1 121612374 4683298 90471..91700 1 NC_008787.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase 91700 4683298 CJJ81176_0105 Campylobacter jejuni subsp. jejuni 81-176 chlorohydrolase YP_999793.1 90471 D 354242 CDS YP_999794.1 121613641 4682283 91688..92584 1 NC_008787.1 identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 36K type 92584 sppA 4682283 sppA Campylobacter jejuni subsp. jejuni 81-176 signal peptide peptidase SppA, 36K type YP_999794.1 91688 D 354242 CDS YP_999795.1 121612896 4682124 92663..93694 1 NC_008787.1 hypothetical protein 93694 4682124 CJJ81176_0107 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999795.1 92663 D 354242 CDS YP_999796.1 121612413 4683424 93707..93829 1 NC_008787.1 hypothetical protein 93829 4683424 CJJ81176_1709 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999796.1 93707 D 354242 CDS YP_999797.1 121613131 4682234 complement(93936..94052) 1 NC_008787.1 hemerythrin family non-heme iron protein 94052 4682234 CJJ81176_0108 Campylobacter jejuni subsp. jejuni 81-176 hemerythrin family non-heme iron protein YP_999797.1 93936 R 354242 CDS YP_999798.1 121612681 4683138 complement(94262..94558) 1 NC_008787.1 hypothetical protein 94558 4683138 CJJ81176_0109 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999798.1 94262 R 354242 CDS YP_999799.1 121613178 4683689 complement(94731..95387) 1 NC_008787.1 identified by match to protein family HMM PF02589; hypothetical protein 95387 4683689 CJJ81176_0110 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999799.1 94731 R 354242 CDS YP_999800.1 121612415 4683077 complement(95380..96819) 1 NC_008787.1 identified by match to protein family HMM PF00037; match to protein family HMM TIGR00273; iron-sulfur cluster binding protein 96819 4683077 CJJ81176_0111 Campylobacter jejuni subsp. jejuni 81-176 iron-sulfur cluster binding protein YP_999800.1 95380 R 354242 CDS YP_999801.1 121612704 4682229 complement(96816..97556) 1 NC_008787.1 identified by match to protein family HMM PF02754; hypothetical protein 97556 4682229 CJJ81176_0112 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999801.1 96816 R 354242 CDS YP_999802.1 121612542 4683663 complement(97679..99361) 1 NC_008787.1 identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795; L-lactate permease 99361 lctP 4683663 lctP Campylobacter jejuni subsp. jejuni 81-176 L-lactate permease YP_999802.1 97679 R 354242 CDS YP_999803.1 121613490 4683067 complement(99533..100102) 1 NC_008787.1 identified by match to protein family HMM PF03498; cytolethal distending toxin, subunit C 100102 cdtC 4683067 cdtC Campylobacter jejuni subsp. jejuni 81-176 cytolethal distending toxin, subunit C YP_999803.1 99533 R 354242 CDS YP_999804.1 121612768 4682711 complement(100113..100910) 1 NC_008787.1 identified by match to protein family HMM PF03372; cytolethal distending toxin, subunit B 100910 cdtB 4682711 cdtB Campylobacter jejuni subsp. jejuni 81-176 cytolethal distending toxin, subunit B YP_999804.1 100113 R 354242 CDS YP_999805.1 121613564 4683576 complement(100907..101713) 1 NC_008787.1 identified by match to protein family HMM PF03498; cytolethal distending toxin, subunit A 101713 cdtA 4683576 cdtA Campylobacter jejuni subsp. jejuni 81-176 cytolethal distending toxin, subunit A YP_999805.1 100907 R 354242 CDS YP_999806.1 121613710 4682145 101790..102059 1 NC_008787.1 hypothetical protein 102059 4682145 CJJ81176_0117 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999806.1 101790 D 354242 CDS YP_999807.1 121612182 4682308 102060..103622 1 NC_008787.1 identified by match to protein family HMM PF01654; cytochrome d ubiquinol oxidase, subunit I 103622 cydA 4682308 cydA Campylobacter jejuni subsp. jejuni 81-176 cytochrome d ubiquinol oxidase, subunit I YP_999807.1 102060 D 354242 CDS YP_999808.1 121613219 4682670 103622..104746 1 NC_008787.1 identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome d ubiquinol oxidase, subunit II 104746 cydB 4682670 cydB Campylobacter jejuni subsp. jejuni 81-176 cytochrome d ubiquinol oxidase, subunit II YP_999808.1 103622 D 354242 CDS YP_999809.1 121612261 4683027 complement(104940..105635) 1 NC_008787.1 identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035; aspartate racemase, putative 105635 4683027 CJJ81176_0120 Campylobacter jejuni subsp. jejuni 81-176 aspartate racemase, putative YP_999809.1 104940 R 354242 CDS YP_999810.1 121612589 4682509 complement(105755..106450) 1 NC_008787.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 106450 ung 4682509 ung Campylobacter jejuni subsp. jejuni 81-176 uracil-DNA glycosylase YP_999810.1 105755 R 354242 CDS YP_999811.1 121613732 4682540 106721..108127 1 NC_008787.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 108127 aspA 4682540 aspA Campylobacter jejuni subsp. jejuni 81-176 aspartate ammonia-lyase YP_999811.1 106721 D 354242 CDS YP_999812.1 121612684 4683300 108153..109481 1 NC_008787.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 109481 dcuA 4683300 dcuA Campylobacter jejuni subsp. jejuni 81-176 anaerobic C4-dicarboxylate transporter YP_999812.1 108153 D 354242 CDS YP_999813.1 121613226 4683692 109589..110950 1 NC_008787.1 putative lipoprotein 110950 4683692 CJJ81176_0124 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_999813.1 109589 D 354242 CDS YP_999814.1 121613232 4683028 110960..111328 1 NC_008787.1 putative lipoprotein 111328 4683028 CJJ81176_0125 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_999814.1 110960 D 354242 CDS YP_999815.1 121613530 4683012 111352..111975 1 NC_008787.1 identified by match to protein family HMM TIGR02722; putative lipoprotein 111975 4683012 CJJ81176_0126 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_999815.1 111352 D 354242 CDS YP_999816.1 121613576 4682096 112057..113394 1 NC_008787.1 hypothetical protein 113394 4682096 CJJ81176_0127 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999816.1 112057 D 354242 CDS YP_999817.1 121612858 4683182 113404..114606 1 NC_008787.1 hypothetical protein 114606 4683182 CJJ81176_0128 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999817.1 113404 D 354242 CDS YP_999818.1 121612829 4683472 114765..115073 1 NC_008787.1 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 115073 rplU 4683472 rplU Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L21 YP_999818.1 114765 D 354242 CDS YP_999819.1 121613378 4683508 115084..115338 1 NC_008787.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 115338 rpmA 4683508 rpmA Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L27 YP_999819.1 115084 D 354242 CDS YP_999820.1 121613578 4682840 115444..116514 1 NC_008787.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 116514 obgE 4682840 obgE Campylobacter jejuni subsp. jejuni 81-176 GTPase ObgE YP_999820.1 115444 D 354242 CDS YP_999821.1 121612918 4683101 116566..117357 1 NC_008787.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 117357 proB 4683101 proB Campylobacter jejuni subsp. jejuni 81-176 gamma-glutamyl kinase YP_999821.1 116566 D 354242 CDS YP_999822.1 121612514 4683400 117431..118348 1 NC_008787.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 118348 fmt 4683400 fmt Campylobacter jejuni subsp. jejuni 81-176 methionyl-tRNA formyltransferase YP_999822.1 117431 D 354242 CDS YP_999823.1 121613004 4683464 118311..118964 1 NC_008787.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 118964 4683464 CJJ81176_0134 Campylobacter jejuni subsp. jejuni 81-176 biotin--protein ligase YP_999823.1 118311 D 354242 CDS YP_999824.1 121613358 4683278 118961..119746 1 NC_008787.1 identified by match to protein family HMM PF01656; ParA family chromosome partitioning ATPase 119746 4683278 CJJ81176_0135 Campylobacter jejuni subsp. jejuni 81-176 ParA family chromosome partitioning ATPase YP_999824.1 118961 D 354242 CDS YP_999825.1 121612620 4682866 119752..120588 1 NC_008787.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB family chromosome partitioning protein 120588 4682866 CJJ81176_0136 Campylobacter jejuni subsp. jejuni 81-176 ParB family chromosome partitioning protein YP_999825.1 119752 D 354242 CDS YP_999826.1 121612882 4682196 120649..121074 1 NC_008787.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 121074 4682196 CJJ81176_0137 Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit B' YP_999826.1 120649 D 354242 CDS YP_999827.1 121613745 4683438 121085..121597 1 NC_008787.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 121597 4683438 CJJ81176_0138 Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit B YP_999827.1 121085 D 354242 CDS YP_999828.1 121612819 4682589 121600..122121 1 NC_008787.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 122121 atpH 4682589 atpH Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit delta YP_999828.1 121600 D 354242 CDS YP_999829.1 121612946 4683520 122135..123640 1 NC_008787.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 123640 atpA 4683520 atpA Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit alpha YP_999829.1 122135 D 354242 CDS YP_999830.1 121612327 4683352 123649..124533 1 NC_008787.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 124533 atpG 4683352 atpG Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit gamma YP_999830.1 123649 D 354242 CDS YP_999831.1 121613266 4682363 124558..125955 1 NC_008787.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 125955 atpD 4682363 atpD Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit beta YP_999831.1 124558 D 354242 CDS YP_999832.1 121613437 4683499 125959..126348 1 NC_008787.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 126348 atpC 4683499 atpC Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit epsilon YP_999832.1 125959 D 354242 CDS YP_999833.1 121612706 4682757 126348..126902 1 NC_008787.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 126902 4682757 CJJ81176_0144 Campylobacter jejuni subsp. jejuni 81-176 MotA/TolQ/ExbB proton channel family protein YP_999833.1 126348 D 354242 CDS YP_999834.1 121613398 4683655 126911..127300 1 NC_008787.1 identified by match to protein family HMM PF02472; match to protein family HMM TIGR02801; TonB system transport protein ExbD, putative 127300 4683655 CJJ81176_0145 Campylobacter jejuni subsp. jejuni 81-176 TonB system transport protein ExbD, putative YP_999834.1 126911 D 354242 CDS YP_999835.1 121612657 4682805 127303..128082 1 NC_008787.1 TonB domain-containing protein 128082 4682805 CJJ81176_0146 Campylobacter jejuni subsp. jejuni 81-176 TonB domain-containing protein YP_999835.1 127303 D 354242 CDS YP_999836.1 121613592 4683715 128092..129300 1 NC_008787.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 129300 tolB 4683715 tolB Campylobacter jejuni subsp. jejuni 81-176 translocation protein TolB YP_999836.1 128092 D 354242 CDS YP_999837.1 121612869 4683364 129377..129874 1 NC_008787.1 identified by match to protein family HMM PF00691; match to protein family HMM TIGR02802; peptidoglycan-associated lipoprotein Omp18 129874 4683364 CJJ81176_0148 Campylobacter jejuni subsp. jejuni 81-176 peptidoglycan-associated lipoprotein Omp18 YP_999837.1 129377 D 354242 CDS YP_999838.1 121613259 4683459 129878..130825 1 NC_008787.1 hypothetical protein 130825 4683459 CJJ81176_0149 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999838.1 129878 D 354242 CDS YP_999839.1 121613510 4682975 130840..131415 1 NC_008787.1 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 131415 slyD 4682975 slyD Campylobacter jejuni subsp. jejuni 81-176 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD YP_999839.1 130840 D 354242 CDS YP_999840.1 121612470 4682687 131415..132335 1 NC_008787.1 identified by match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 132335 fabD 4682687 fabD Campylobacter jejuni subsp. jejuni 81-176 malonyl CoA-acyl carrier protein transacylase YP_999840.1 131415 D 354242 CDS YP_999841.1 121613059 4682121 132335..133021 1 NC_008787.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 133021 mtnA 4682121 mtnA Campylobacter jejuni subsp. jejuni 81-176 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_999841.1 132335 D 354242 CDS YP_999842.1 121612303 4683219 133018..133773 1 NC_008787.1 identified by match to protein family HMM PF01171; PP-loop family protein 133773 4683219 CJJ81176_0153 Campylobacter jejuni subsp. jejuni 81-176 PP-loop family protein YP_999842.1 133018 D 354242 CDS YP_999843.1 121613052 4682425 133778..134299 1 NC_008787.1 pyrazinamidase/nicotinamidase, putative 134299 4682425 CJJ81176_0154 Campylobacter jejuni subsp. jejuni 81-176 pyrazinamidase/nicotinamidase, putative YP_999843.1 133778 D 354242 CDS YP_999844.1 121612920 4683226 134299..134913 1 NC_008787.1 putative recombination protein RecO 134913 4683226 CJJ81176_0155 Campylobacter jejuni subsp. jejuni 81-176 putative recombination protein RecO YP_999844.1 134299 D 354242 CDS YP_999845.1 121613427 4683398 134910..135314 1 NC_008787.1 identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; putative metalloprotease 135314 4683398 CJJ81176_0156 Campylobacter jejuni subsp. jejuni 81-176 putative metalloprotease YP_999845.1 134910 D 354242 CDS YP_999846.1 121612405 4682761 135405..136658 1 NC_008787.1 hypothetical protein 136658 4682761 CJJ81176_0157 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999846.1 135405 D 354242 CDS YP_999847.1 121612695 4682247 complement(136655..137572) 1 NC_008787.1 identified by match to protein family HMM PF01207; tRNA-dihydrouridine synthase B 137572 dusB 4682247 dusB Campylobacter jejuni subsp. jejuni 81-176 tRNA-dihydrouridine synthase B YP_999847.1 136655 R 354242 CDS YP_999848.1 121613318 4683677 complement(137569..138429) 1 NC_008787.1 hypothetical protein 138429 4683677 CJJ81176_0159 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999848.1 137569 R 354242 CDS YP_999849.1 121612516 4682920 complement(138545..138907) 1 NC_008787.1 identified by match to protein family HMM PF01258; dnaK suppressor protein, putative 138907 4682920 CJJ81176_0160 Campylobacter jejuni subsp. jejuni 81-176 dnaK suppressor protein, putative YP_999849.1 138545 R 354242 CDS YP_999850.1 121613444 4683408 complement(138919..139368) 1 NC_008787.1 identified by match to protein family HMM PF02590; hypothetical protein 139368 4683408 CJJ81176_0161 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999850.1 138919 R 354242 CDS YP_999851.1 121612636 4682752 complement(139370..140212) 1 NC_008787.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 140212 accD 4682752 accD Campylobacter jejuni subsp. jejuni 81-176 acetyl-CoA carboxylase subunit beta YP_999851.1 139370 R 354242 CDS YP_999852.1 121613474 4683740 complement(140221..140943) 1 NC_008787.1 identified by match to protein family HMM PF00459; inositol monophosphatase family protein 140943 4683740 CJJ81176_0163 Campylobacter jejuni subsp. jejuni 81-176 inositol monophosphatase family protein YP_999852.1 140221 R 354242 CDS YP_999853.1 121612878 4682724 complement(140943..143162) 1 NC_008787.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; OMP85 family outer membrane protein 143162 4682724 CJJ81176_0164 Campylobacter jejuni subsp. jejuni 81-176 OMP85 family outer membrane protein YP_999853.1 140943 R 354242 CDS YP_999854.1 121613622 4683446 143239..144066 1 NC_008787.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 144066 tyrA 4683446 tyrA Campylobacter jejuni subsp. jejuni 81-176 prephenate dehydrogenase YP_999854.1 143239 D 354242 CDS YP_999855.1 121612903 4683378 144146..145519 1 NC_008787.1 identified by match to protein family HMM PF01551; M24/M37 family peptidase 145519 4683378 CJJ81176_0166 Campylobacter jejuni subsp. jejuni 81-176 M24/M37 family peptidase YP_999855.1 144146 D 354242 CDS YP_999856.1 121612939 4683421 145519..146403 1 NC_008787.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 146403 lpxC 4683421 lpxC Campylobacter jejuni subsp. jejuni 81-176 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_999856.1 145519 D 354242 CDS YP_999857.1 121612260 4683383 146442..146843 1 NC_008787.1 hypothetical protein 146843 4683383 CJJ81176_0168 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999857.1 146442 D 354242 CDS YP_999858.1 121613224 4682508 146852..147730 1 NC_008787.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 147730 thrB 4682508 thrB Campylobacter jejuni subsp. jejuni 81-176 homoserine kinase YP_999858.1 146852 D 354242 CDS YP_999859.1 121613401 4683016 147755..148012 1 NC_008787.1 identified by match to protein family HMM PF04296; hypothetical protein 148012 4683016 CJJ81176_0170 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999859.1 147755 D 354242 CDS YP_999860.1 121613218 4682810 147999..150614 1 NC_008787.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 150614 infB 4682810 infB Campylobacter jejuni subsp. jejuni 81-176 translation initiation factor IF-2 YP_999860.1 147999 D 354242 CDS YP_999861.1 121612306 4683026 150611..150973 1 NC_008787.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 150973 rbfA 4683026 rbfA Campylobacter jejuni subsp. jejuni 81-176 ribosome-binding factor A YP_999861.1 150611 D 354242 CDS YP_999862.1 121613126 4682403 150963..151385 1 NC_008787.1 identified by match to protein family HMM PF02576; hypothetical protein 151385 4682403 CJJ81176_0173 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999862.1 150963 D 354242 CDS YP_999863.1 121612502 4683145 151590..153401 1 NC_008787.1 identified by match to protein family HMM PF07728; McrBC restriction endonuclease system, McrB subunit, putative 153401 4683145 CJJ81176_0174 Campylobacter jejuni subsp. jejuni 81-176 McrBC restriction endonuclease system, McrB subunit, putative YP_999863.1 151590 D 354242 CDS YP_999864.1 121613733 4683529 153401..153880 1 NC_008787.1 hypothetical protein 153880 4683529 CJJ81176_0175 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999864.1 153401 D 354242 CDS YP_999865.1 121613370 4683301 153871..154737 1 NC_008787.1 hypothetical protein 154737 4683301 CJJ81176_0176 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999865.1 153871 D 354242 CDS YP_999866.1 121612280 4682856 complement(154726..155529) 1 NC_008787.1 identified by match to protein family HMM PF00950; match to protein family HMM PF01032; cation ABC transporter, permease protein 155529 4682856 CJJ81176_0177 Campylobacter jejuni subsp. jejuni 81-176 cation ABC transporter, permease protein YP_999866.1 154726 R 354242 CDS YP_999867.1 121612843 4682457 complement(155522..156376) 1 NC_008787.1 identified by match to protein family HMM PF00005; cation ABC transporter, ATP-binding protein 156376 4682457 CJJ81176_0178 Campylobacter jejuni subsp. jejuni 81-176 cation ABC transporter, ATP-binding protein YP_999867.1 155522 R 354242 CDS YP_999868.1 121612478 4683493 complement(156389..157279) 1 NC_008787.1 identified by match to protein family HMM PF01297; cation ABC transporter, periplasmic cation-binding protein 157279 4683493 CJJ81176_0179 Campylobacter jejuni subsp. jejuni 81-176 cation ABC transporter, periplasmic cation-binding protein YP_999868.1 156389 R 354242 CDS YP_999869.1 121613238 4683774 157478..159457 1 NC_008787.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 159457 4683774 CJJ81176_0180 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_999869.1 157478 D 354242 CDS YP_999870.1 121612931 4683002 159592..161373 1 NC_008787.1 identified by match to protein family HMM PF05787; match to protein family HMM TIGR01409; hypothetical protein 161373 4683002 CJJ81176_0181 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999870.1 159592 D 354242 CDS YP_999871.1 121613636 4683391 complement(161411..162349) 1 NC_008787.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 162349 trxB 4683391 trxB Campylobacter jejuni subsp. jejuni 81-176 thioredoxin-disulfide reductase YP_999871.1 161411 R 354242 CDS YP_999872.1 121612861 4683578 complement(162483..162797) 1 NC_008787.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 162797 trx 4683578 trx Campylobacter jejuni subsp. jejuni 81-176 thioredoxin YP_999872.1 162483 R 354242 CDS YP_999873.1 121612956 4683477 complement(162854..163192) 1 NC_008787.1 identified by match to protein family HMM PF02021; hypothetical protein 163192 4683477 CJJ81176_0184 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999873.1 162854 R 354242 CDS YP_999874.1 121612210 4683334 complement(163192..164439) 1 NC_008787.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 164439 hom 4683334 hom Campylobacter jejuni subsp. jejuni 81-176 homoserine dehydrogenase YP_999874.1 163192 R 354242 CDS YP_999875.1 121613169 4682601 complement(164443..165645) 1 NC_008787.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 165645 4682601 CJJ81176_0186 Campylobacter jejuni subsp. jejuni 81-176 aspartate aminotransferase YP_999875.1 164443 R 354242 CDS YP_999876.1 121612426 4683086 complement(165657..166463) 1 NC_008787.1 hypothetical protein 166463 4683086 CJJ81176_0187 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999876.1 165657 R 354242 CDS YP_999877.1 121612535 4682202 complement(166457..167395) 1 NC_008787.1 hypothetical protein 167395 4682202 CJJ81176_0188 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999877.1 166457 R 354242 CDS YP_999878.1 121613667 4683160 complement(167388..168071) 1 NC_008787.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase 168071 4683160 CJJ81176_0189 Campylobacter jejuni subsp. jejuni 81-176 RNA methyltransferase YP_999878.1 167388 R 354242 CDS YP_999879.1 121612798 4682419 complement(168085..168909) 1 NC_008787.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 168909 4682419 CJJ81176_0190 Campylobacter jejuni subsp. jejuni 81-176 tetrapyrrole methylase family protein YP_999879.1 168085 R 354242 CDS YP_999880.1 121612224 4683548 complement(168912..169112) 1 NC_008787.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 169112 rpmE 4683548 rpmE Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L31 YP_999880.1 168912 R 354242 CDS YP_999881.1 121613031 4682572 complement(169191..169847) 1 NC_008787.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 169847 4682572 CJJ81176_0192 Campylobacter jejuni subsp. jejuni 81-176 16S ribosomal RNA methyltransferase RsmE YP_999881.1 169191 R 354242 CDS YP_999882.1 121612841 4683245 complement(169849..170256) 1 NC_008787.1 hypothetical protein 170256 4683245 CJJ81176_0193 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999882.1 169849 R 354242 CDS YP_999883.1 121612824 4683479 complement(170256..170681) 1 NC_008787.1 cytochrome c family protein 170681 4683479 CJJ81176_0194 Campylobacter jejuni subsp. jejuni 81-176 cytochrome c family protein YP_999883.1 170256 R 354242 CDS YP_999884.1 121612162 4683503 complement(170681..171262) 1 NC_008787.1 6-pyruvoyl tetrahydrobiopterin synthase-like protein 171262 4683503 CJJ81176_0195 Campylobacter jejuni subsp. jejuni 81-176 6-pyruvoyl tetrahydrobiopterin synthase-like protein YP_999884.1 170681 R 354242 CDS YP_999885.1 121613080 4682635 complement(171259..172002) 1 NC_008787.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 172002 4682635 CJJ81176_0196 Campylobacter jejuni subsp. jejuni 81-176 radical SAM domain-containing protein YP_999885.1 171259 R 354242 CDS YP_999886.1 121612497 4683190 complement(172005..172967) 1 NC_008787.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 172967 moaA 4683190 moaA Campylobacter jejuni subsp. jejuni 81-176 molybdenum cofactor biosynthesis protein A YP_999886.1 172005 R 354242 CDS YP_999887.1 121612438 4683632 complement(172980..173495) 1 NC_008787.1 hypothetical protein 173495 4683632 CJJ81176_0198 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999887.1 172980 R 354242 CDS YP_999888.1 121613443 4682185 complement(173492..173692) 1 NC_008787.1 hypothetical protein 173692 4682185 CJJ81176_0199 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999888.1 173492 R 354242 CDS YP_999889.1 121612687 4682749 complement(173980..174864) 1 NC_008787.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 174864 ubiA 4682749 ubiA Campylobacter jejuni subsp. jejuni 81-176 prenyltransferase YP_999889.1 173980 R 354242 CDS YP_999890.1 121613065 4683685 174935..175804 1 NC_008787.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 175804 miaA 4683685 miaA Campylobacter jejuni subsp. jejuni 81-176 tRNA delta(2)-isopentenylpyrophosphate transferase YP_999890.1 174935 D 354242 CDS YP_999891.1 121612473 4683209 complement(175790..176353) 1 NC_008787.1 identified by match to protein family HMM PF02659; hypothetical protein 176353 4683209 CJJ81176_0202 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999891.1 175790 R 354242 CDS YP_999892.1 121612377 4682574 complement(176711..176893) 1 NC_008787.1 hypothetical protein 176893 4682574 CJJ81176_0204 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999892.1 176711 R 354242 CDS YP_999893.1 121612707 4682282 177161..177823 1 NC_008787.1 identified by match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase, Fe 177823 sodB 4682282 sodB Campylobacter jejuni subsp. jejuni 81-176 superoxide dismutase, Fe YP_999893.1 177161 D 354242 CDS YP_999894.1 121613451 4683656 177892..178110 1 NC_008787.1 hypothetical protein 178110 4683656 CJJ81176_0206 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999894.1 177892 D 354242 CDS YP_999895.1 121613605 4682743 178220..178582 1 NC_008787.1 hypothetical protein 178582 4682743 CJJ81176_0207 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999895.1 178220 D 354242 CDS YP_999896.1 121612631 4683771 complement(178595..179800) 1 NC_008787.1 identified by match to protein family HMM PF03435; saccharopine dehydrogenase 179800 4683771 CJJ81176_0208 Campylobacter jejuni subsp. jejuni 81-176 saccharopine dehydrogenase YP_999896.1 178595 R 354242 CDS YP_999897.1 121613129 4683753 complement(179842..180750) 1 NC_008787.1 identified by match to protein family HMM PF00005; iron ABC transporter, ATP binding subunit 180750 4683753 CJJ81176_0209 Campylobacter jejuni subsp. jejuni 81-176 iron ABC transporter, ATP binding subunit YP_999897.1 179842 R 354242 CDS YP_999898.1 121612175 4683124 complement(180734..182350) 1 NC_008787.1 identified by match to protein family HMM PF00528; iron ABC transporter, permease protein 182350 4683124 CJJ81176_0210 Campylobacter jejuni subsp. jejuni 81-176 iron ABC transporter, permease protein YP_999898.1 180734 R 354242 CDS YP_999899.1 121612406 4682692 complement(182350..183354) 1 NC_008787.1 identified by match to protein family HMM PF01547; iron ABC transporter, periplasmic iron-binding protein 183354 4682692 CJJ81176_0211 Campylobacter jejuni subsp. jejuni 81-176 iron ABC transporter, periplasmic iron-binding protein YP_999899.1 182350 R 354242 CDS YP_999900.1 121612367 4682230 complement(183365..183481) 1 NC_008787.1 hypothetical protein 183481 4682230 CJJ81176_0212 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999900.1 183365 R 354242 CDS YP_999901.1 121613512 4682295 183674..184873 1 NC_008787.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; putative transporter 184873 4682295 CJJ81176_0213 Campylobacter jejuni subsp. jejuni 81-176 putative transporter YP_999901.1 183674 D 354242 CDS YP_999902.1 121612599 4683750 185044..186330 1 NC_008787.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; transporter, putative 186330 4683750 CJJ81176_0214 Campylobacter jejuni subsp. jejuni 81-176 transporter, putative YP_999902.1 185044 D 354242 CDS YP_999903.1 121613728 4682388 complement(186343..187527) 1 NC_008787.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 187527 4682388 CJJ81176_0215 Campylobacter jejuni subsp. jejuni 81-176 Ser/Thr protein phosphatase family protein YP_999903.1 186343 R 354242 CDS YP_999904.1 121613234 4682175 complement(187537..187746) 1 NC_008787.1 identified by match to protein family HMM PF03831; PhnA domain-containing protein 187746 4682175 CJJ81176_0216 Campylobacter jejuni subsp. jejuni 81-176 PhnA domain-containing protein YP_999904.1 187537 R 354242 CDS YP_999905.1 121613682 4683014 complement(187739..188458) 1 NC_008787.1 identified by match to protein family HMM PF03741; TerC family integral membrane protein 188458 4683014 CJJ81176_0217 Campylobacter jejuni subsp. jejuni 81-176 TerC family integral membrane protein YP_999905.1 187739 R 354242 CDS YP_999906.1 121612961 4682341 complement(188530..189096) 1 NC_008787.1 identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase 189096 purN 4682341 purN Campylobacter jejuni subsp. jejuni 81-176 phosphoribosylglycinamide formyltransferase YP_999906.1 188530 R 354242 CDS YP_999907.1 121612474 4683331 complement(189087..190457) 1 NC_008787.1 identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; hypothetical protein 190457 4683331 CJJ81176_0219 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999907.1 189087 R 354242 CDS YP_999908.1 121612716 4682080 complement(190441..191139) 1 NC_008787.1 identified by match to protein family HMM PF01936; hypothetical protein 191139 4682080 CJJ81176_0220 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999908.1 190441 R 354242 CDS YP_999909.1 121612380 4683637 complement(191141..192646) 1 NC_008787.1 identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg chelatase-related protein 192646 4683637 CJJ81176_0221 Campylobacter jejuni subsp. jejuni 81-176 Mg chelatase-related protein YP_999909.1 191141 R 354242 CDS YP_999910.1 121612384 4682275 complement(192643..193170) 1 NC_008787.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 193170 def 4682275 def Campylobacter jejuni subsp. jejuni 81-176 peptide deformylase YP_999910.1 192643 R 354242 CDS YP_999911.1 121612255 4682263 complement(193206..193790) 1 NC_008787.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 193790 clpP 4682263 clpP Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent Clp protease proteolytic subunit YP_999911.1 193206 R 354242 CDS YP_999912.1 121612935 4682507 complement(193790..195124) 1 NC_008787.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 195124 tig 4682507 tig Campylobacter jejuni subsp. jejuni 81-176 trigger factor YP_999912.1 193790 R 354242 CDS YP_999913.1 121612522 4683363 195268..195840 1 NC_008787.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 195840 folE 4683363 folE Campylobacter jejuni subsp. jejuni 81-176 GTP cyclohydrolase I YP_999913.1 195268 D 354242 CDS YP_999914.1 121613240 4683388 195840..197225 1 NC_008787.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 197225 fliI 4683388 fliI Campylobacter jejuni subsp. jejuni 81-176 flagellum-specific ATP synthase YP_999914.1 195840 D 354242 CDS YP_999915.1 121613314 4682992 complement(197228..198565) 1 NC_008787.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 198565 purF 4682992 purF Campylobacter jejuni subsp. jejuni 81-176 amidophosphoribosyltransferase YP_999915.1 197228 R 354242 CDS YP_999916.1 121612567 4682912 complement(198567..199295) 1 NC_008787.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 199295 dapB 4682912 dapB Campylobacter jejuni subsp. jejuni 81-176 dihydrodipicolinate reductase YP_999916.1 198567 R 354242 CDS YP_999917.1 121613547 4682800 complement(199358..200539) 1 NC_008787.1 identified by match to protein family HMM PF00004; recombination factor protein RarA 200539 4682800 CJJ81176_0229 Campylobacter jejuni subsp. jejuni 81-176 recombination factor protein RarA YP_999917.1 199358 R 354242 CDS YP_999918.1 121612793 4682111 complement(200539..201666) 1 NC_008787.1 hypothetical protein 201666 4682111 CJJ81176_0230 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999918.1 200539 R 354242 CDS YP_999919.1 121612608 4683547 complement(201801..202148) 1 NC_008787.1 hypothetical protein 202148 4683547 CJJ81176_0231 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999919.1 201801 R 354242 CDS YP_999920.1 121613535 4682310 complement(202247..202852) 1 NC_008787.1 hypothetical protein 202852 4682310 CJJ81176_0232 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999920.1 202247 R 354242 CDS YP_999921.1 121612580 4682101 complement(202803..203030) 1 NC_008787.1 hypothetical protein 203030 4682101 CJJ81176_0233 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999921.1 202803 R 354242 CDS YP_999922.1 121613321 4682653 complement(203008..203145) 1 NC_008787.1 hypothetical protein 203145 4682653 CJJ81176_0234 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999922.1 203008 R 354242 CDS YP_999923.1 121612409 4682911 203388..204734 1 NC_008787.1 identified by match to protein family HMM PF03600; match to protein family HMM PF06808; citrate transporter, authentic frameshift 204734 4682911 CJJ81176_0235 Campylobacter jejuni subsp. jejuni 81-176 citrate transporter, authentic frameshift YP_999923.1 203388 D 354242 CDS YP_999924.1 121613125 4682225 204920..206914 1 NC_008787.1 identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733; OPT family oligopeptide transporter 206914 4682225 CJJ81176_0236 Campylobacter jejuni subsp. jejuni 81-176 OPT family oligopeptide transporter YP_999924.1 204920 D 354242 CDS YP_999925.1 121612212 4683150 206988..207791 1 NC_008787.1 identified by match to protein family HMM PF02673; match to protein family HMM TIGR00753; undecaprenol kinase, putative 207791 4683150 CJJ81176_0237 Campylobacter jejuni subsp. jejuni 81-176 undecaprenol kinase, putative YP_999925.1 206988 D 354242 CDS YP_999926.1 121612820 4682620 207922..209730 1 NC_008787.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 209730 thrS 4682620 thrS Campylobacter jejuni subsp. jejuni 81-176 threonyl-tRNA synthetase YP_999926.1 207922 D 354242 CDS YP_999927.1 121612832 4683580 209727..210245 1 NC_008787.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 210245 infC 4683580 infC Campylobacter jejuni subsp. jejuni 81-176 translation initiation factor IF-3 YP_999927.1 209727 D 354242 CDS YP_999928.1 121613412 4683494 210284..211375 1 NC_008787.1 identified by match to protein family HMM PF02086; D12 class N6 adenine-specific DNA methyltransferase 211375 4683494 CJJ81176_0240 Campylobacter jejuni subsp. jejuni 81-176 D12 class N6 adenine-specific DNA methyltransferase YP_999928.1 210284 D 354242 CDS YP_999929.1 121612618 4682803 211605..211730 1 NC_008787.1 hypothetical protein 211730 4682803 CJJ81176_0241 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999929.1 211605 D 354242 CDS YP_999930.1 121612683 4682252 211850..212296 1 NC_008787.1 hypothetical protein 212296 4682252 CJJ81176_0242 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999930.1 211850 D 354242 CDS YP_999931.1 121613385 4683679 212460..212690 1 NC_008787.1 hypothetical protein 212690 4683679 CJJ81176_0243 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999931.1 212460 D 354242 CDS YP_999932.1 121612616 4682829 212753..213331 1 NC_008787.1 hypothetical protein 213331 4682829 CJJ81176_0244 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999932.1 212753 D 354242 CDS YP_999933.1 121613660 4682241 213489..213752 1 NC_008787.1 hypothetical protein 213752 4682241 CJJ81176_0245 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999933.1 213489 D 354242 CDS YP_999934.1 121612881 4682556 213727..213885 1 NC_008787.1 pathogenicity domain-containing protein 213885 4682556 CJJ81176_0246 Campylobacter jejuni subsp. jejuni 81-176 pathogenicity domain-containing protein YP_999934.1 213727 D 354242 CDS YP_999935.1 121612985 4683437 214455..214622 1 NC_008787.1 hypothetical protein 214622 4683437 CJJ81176_0247 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999935.1 214455 D 354242 CDS YP_999936.1 121612279 4683311 214736..214867 1 NC_008787.1 pathogenicity protein, putative, truncation 214867 4683311 CJJ81176_0248 Campylobacter jejuni subsp. jejuni 81-176 pathogenicity protein, putative, truncation YP_999936.1 214736 D 354242 CDS YP_999937.1 121612610 4682460 214948..215976 1 NC_008787.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 215976 argC 4682460 argC Campylobacter jejuni subsp. jejuni 81-176 N-acetyl-gamma-glutamyl-phosphate reductase YP_999937.1 214948 D 354242 CDS YP_999938.1 121612506 4682323 215985..216431 1 NC_008787.1 identified by match to protein family HMM PF00583; acetyltransferase 216431 4682323 CJJ81176_0250 Campylobacter jejuni subsp. jejuni 81-176 acetyltransferase YP_999938.1 215985 D 354242 CDS YP_999939.1 121612848 4683552 216441..217280 1 NC_008787.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 217280 argB 4683552 argB Campylobacter jejuni subsp. jejuni 81-176 acetylglutamate kinase YP_999939.1 216441 D 354242 CDS YP_999940.1 121613570 4683517 217290..218471 1 NC_008787.1 identified by match to protein family HMM PF00202; match to protein family HMM TIGR00707; acetylornithine aminotransferase 218471 argD 4683517 argD Campylobacter jejuni subsp. jejuni 81-176 acetylornithine aminotransferase YP_999940.1 217290 D 354242 CDS YP_999941.1 121613075 4682528 complement(218491..219120) 1 NC_008787.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 219120 pcm 4682528 pcm Campylobacter jejuni subsp. jejuni 81-176 protein-L-isoaspartate O-methyltransferase YP_999941.1 218491 R 354242 CDS YP_999942.1 121612504 4683199 219209..219757 1 NC_008787.1 identified by match to protein family HMM PF00132; hexapaptide repeat-containing transferase 219757 4683199 CJJ81176_0254 Campylobacter jejuni subsp. jejuni 81-176 hexapaptide repeat-containing transferase YP_999942.1 219209 D 354242 CDS YP_999943.1 121612146 4683544 complement(219726..221096) 1 NC_008787.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 221096 4683544 CJJ81176_0255 Campylobacter jejuni subsp. jejuni 81-176 nicotinate phosphoribosyltransferase YP_999943.1 219726 R 354242 CDS YP_999944.1 121613260 4682562 complement(221086..222108) 1 NC_008787.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 222108 nrdF 4682562 nrdF Campylobacter jejuni subsp. jejuni 81-176 ribonucleotide-diphosphate reductase subunit beta YP_999944.1 221086 R 354242 CDS YP_999945.1 121612624 4682990 complement(222122..222532) 1 NC_008787.1 identified by match to protein family HMM PF06271; hypothetical protein 222532 4682990 CJJ81176_0257 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999945.1 222122 R 354242 CDS YP_999946.1 121613361 4682147 complement(222533..223141) 1 NC_008787.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 223141 pyrE 4682147 pyrE Campylobacter jejuni subsp. jejuni 81-176 orotate phosphoribosyltransferase YP_999946.1 222533 R 354242 CDS YP_999947.1 121612237 4682861 complement(223144..223701) 1 NC_008787.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 223701 frr 4682861 frr Campylobacter jejuni subsp. jejuni 81-176 ribosome recycling factor YP_999947.1 223144 R 354242 CDS YP_999948.1 121613335 4682565 complement(223717..224088) 1 NC_008787.1 identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 224088 secG 4682565 secG Campylobacter jejuni subsp. jejuni 81-176 preprotein translocase subunit SecG YP_999948.1 223717 R 354242 CDS YP_999949.1 121612142 4682895 complement(224192..224887) 1 NC_008787.1 identified by match to protein family HMM PF01027; hypothetical protein 224887 4682895 CJJ81176_0261 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999949.1 224192 R 354242 CDS YP_999950.1 121613517 4682547 225047..225682 1 NC_008787.1 identified by match to protein family HMM PF00484; carbonic anhydrase 225682 cynT 4682547 cynT Campylobacter jejuni subsp. jejuni 81-176 carbonic anhydrase YP_999950.1 225047 D 354242 CDS YP_999951.1 121613243 4683747 225679..227562 1 NC_008787.1 identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein 227562 4683747 CJJ81176_0263 Campylobacter jejuni subsp. jejuni 81-176 mechanosensitive ion channel family protein YP_999951.1 225679 D 354242 CDS YP_999952.1 121613377 4683005 complement(227587..228558) 1 NC_008787.1 identified by match to protein family HMM PF01106; match to protein family HMM PF01592; match to protein family HMM PF04324; NifU family protein 228558 4683005 CJJ81176_0264 Campylobacter jejuni subsp. jejuni 81-176 NifU family protein YP_999952.1 227587 R 354242 CDS YP_999953.1 121612995 4682847 complement(228568..229749) 1 NC_008787.1 identified by match to protein family HMM PF00266; cysteine desulfurase, putative 229749 4682847 CJJ81176_0265 Campylobacter jejuni subsp. jejuni 81-176 cysteine desulfurase, putative YP_999953.1 228568 R 354242 CDS YP_999954.1 121612294 4683289 complement(229927..230328) 1 NC_008787.1 identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hypothetical protein 230328 4683289 CJJ81176_0266 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999954.1 229927 R 354242 CDS YP_999955.1 121612787 4682432 complement(230465..231631) 1 NC_008787.1 hypothetical protein 231631 4682432 CJJ81176_0267 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999955.1 230465 R 354242 CDS YP_999956.1 121613715 4683551 complement(231702..231830) 1 NC_008787.1 hypothetical protein 231830 4683551 CJJ81176_0268 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999956.1 231702 R 354242 CDS YP_999957.1 121612551 4682492 231787..231978 1 NC_008787.1 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 231978 rpmI 4682492 rpmI Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L35 YP_999957.1 231787 D 354242 CDS YP_999958.1 121613523 4682979 232072..232425 1 NC_008787.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 232425 rplT 4682979 rplT Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L20 YP_999958.1 232072 D 354242 CDS YP_999959.1 121613161 4682093 complement(232477..232731) 1 NC_008787.1 MCP-domain-containing signal transduction protein 232731 4682093 CJJ81176_0271 Campylobacter jejuni subsp. jejuni 81-176 MCP-domain-containing signal transduction protein YP_999959.1 232477 R 354242 CDS YP_999960.1 121613110 4683112 complement(233117..233290) 1 NC_008787.1 MCP-domain-containing signal transduction protein 233290 4683112 CJJ81176_0272 Campylobacter jejuni subsp. jejuni 81-176 MCP-domain-containing signal transduction protein YP_999960.1 233117 R 354242 CDS YP_999961.1 121612190 4683161 complement(233407..233778) 1 NC_008787.1 MCP-domain-containing signal transduction protein 233778 4683161 CJJ81176_0273 Campylobacter jejuni subsp. jejuni 81-176 MCP-domain-containing signal transduction protein YP_999961.1 233407 R 354242 CDS YP_999962.1 121612778 4682649 complement(233783..234454) 1 NC_008787.1 hypothetical protein 234454 4682649 CJJ81176_0274 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999962.1 233783 R 354242 CDS YP_999963.1 121612647 4683566 234632..235489 1 NC_008787.1 hypothetical protein 235489 4683566 CJJ81176_0275 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999963.1 234632 D 354242 CDS YP_999964.1 121612460 4683731 235520..235996 1 NC_008787.1 hypothetical protein 235996 4683731 CJJ81176_0276 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999964.1 235520 D 354242 CDS YP_999965.1 121613388 4682155 complement(235965..237275) 1 NC_008787.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily protein 237275 4682155 CJJ81176_0277 Campylobacter jejuni subsp. jejuni 81-176 major facilitator superfamily protein YP_999965.1 235965 R 354242 CDS YP_999966.1 121613188 4682830 complement(237278..237433) 1 NC_008787.1 hypothetical protein 237433 4682830 CJJ81176_0278 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999966.1 237278 R 354242 CDS YP_999967.1 121613195 4683061 237526..237999 1 NC_008787.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 237999 moaC 4683061 moaC Campylobacter jejuni subsp. jejuni 81-176 molybdenum cofactor biosynthesis protein MoaC YP_999967.1 237526 D 354242 CDS YP_999968.1 121612313 4683060 237977..238240 1 NC_008787.1 hypothetical protein 238240 4683060 CJJ81176_0280 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999968.1 237977 D 354242 CDS YP_999969.1 121613015 4682392 238254..239390 1 NC_008787.1 hypothetical protein 239390 4682392 CJJ81176_0281 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999969.1 238254 D 354242 CDS YP_999970.1 121613613 4683277 complement(239410..240189) 1 NC_008787.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 240189 xth 4683277 xth Campylobacter jejuni subsp. jejuni 81-176 exodeoxyribonuclease III YP_999970.1 239410 R 354242 CDS YP_999971.1 121612927 4683782 240286..241824 1 NC_008787.1 identified by match to protein family HMM PF00884; match to protein family HMM PF08019; sulfatase, putative 241824 4683782 CJJ81176_0283 Campylobacter jejuni subsp. jejuni 81-176 sulfatase, putative YP_999971.1 240286 D 354242 CDS YP_999972.1 121613560 4683385 241821..242177 1 NC_008787.1 identified by match to protein family HMM PF01219; diacylglycerol kinase 242177 dgkA 4683385 dgkA Campylobacter jejuni subsp. jejuni 81-176 diacylglycerol kinase YP_999972.1 241821 D 354242 CDS YP_999973.1 121612846 4682522 242174..242419 1 NC_008787.1 hypothetical protein 242419 4682522 CJJ81176_0285 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999973.1 242174 D 354242 CDS YP_999974.1 121613442 4683480 242409..243416 1 NC_008787.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 243416 pyrC 4683480 pyrC Campylobacter jejuni subsp. jejuni 81-176 dihydroorotase YP_999974.1 242409 D 354242 CDS YP_999975.1 121612628 4682748 complement(243441..243662) 1 NC_008787.1 hypothetical protein 243662 4682748 CJJ81176_0287 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999975.1 243441 R 354242 CDS YP_999976.1 121612352 4682086 complement(243718..244437) 1 NC_008787.1 hypothetical protein 244437 4682086 CJJ81176_0288 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999976.1 243718 R 354242 CDS YP_999977.1 121613277 4682306 complement(244517..246514) 1 NC_008787.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; match to protein family HMM PF05581; methyl-accepting chemotaxis protein 246514 4682306 CJJ81176_0289 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_999977.1 244517 R 354242 CDS YP_999978.1 121612422 4682971 246707..247582 1 NC_008787.1 identified by match to protein family HMM PF02535; zinc transporter ZupT 247582 4682971 CJJ81176_0290 Campylobacter jejuni subsp. jejuni 81-176 zinc transporter ZupT YP_999978.1 246707 D 354242 CDS YP_999979.1 121613119 4682214 complement(247606..250122) 1 NC_008787.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; biotin sulfoxide reductase 250122 4682214 CJJ81176_0291 Campylobacter jejuni subsp. jejuni 81-176 biotin sulfoxide reductase YP_999979.1 247606 R 354242 CDS YP_999980.1 121612740 4683154 complement(250133..250708) 1 NC_008787.1 putative cytochrome C-type haem-binding periplasmic protein 250708 4683154 CJJ81176_0292 Campylobacter jejuni subsp. jejuni 81-176 putative cytochrome C-type haem-binding periplasmic protein YP_999980.1 250133 R 354242 CDS YP_999981.1 121613656 4683620 complement(251189..251698) 1 NC_008787.1 hypothetical protein 251698 4683620 CJJ81176_0293 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999981.1 251189 R 354242 CDS YP_999982.1 121612316 4682549 complement(251698..252207) 1 NC_008787.1 hypothetical protein 252207 4682549 CJJ81176_0294 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999982.1 251698 R 354242 CDS YP_999983.1 121613302 4682383 complement(252241..253329) 1 NC_008787.1 identified by match to protein family HMM PF01145; SPFH domain-containing protein 253329 4682383 CJJ81176_0295 Campylobacter jejuni subsp. jejuni 81-176 SPFH domain-containing protein YP_999983.1 252241 R 354242 CDS YP_999984.1 121613303 4682934 complement(253342..254256) 1 NC_008787.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 254256 ilvE 4682934 ilvE Campylobacter jejuni subsp. jejuni 81-176 branched-chain amino acid aminotransferase YP_999984.1 253342 R 354242 CDS YP_999985.1 121612329 4682935 254432..254638 1 NC_008787.1 identified by match to protein family HMM PF01361; match to protein family HMM TIGR00013; 4-oxalocrotonate tautomerase family protein 254638 4682935 CJJ81176_0297 Campylobacter jejuni subsp. jejuni 81-176 4-oxalocrotonate tautomerase family protein YP_999985.1 254432 D 354242 CDS YP_999986.1 121612655 4682356 254635..255090 1 NC_008787.1 identified by match to protein family HMM PF00578; anti-oxidant AhpCTSA family protein 255090 4682356 CJJ81176_0298 Campylobacter jejuni subsp. jejuni 81-176 anti-oxidant AhpCTSA family protein YP_999986.1 254635 D 354242 CDS YP_999987.1 121613430 4683725 255090..256181 1 NC_008787.1 identified by match to protein family HMM PF02677; hypothetical protein 256181 4683725 CJJ81176_0299 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999987.1 255090 D 354242 CDS YP_999988.1 121613704 4682801 256276..256716 1 NC_008787.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 256716 fabZ 4682801 fabZ Campylobacter jejuni subsp. jejuni 81-176 (3R)-hydroxymyristoyl-ACP dehydratase YP_999988.1 256276 D 354242 CDS YP_999989.1 121612189 4682343 256716..257507 1 NC_008787.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 257507 lpxA 4682343 lpxA Campylobacter jejuni subsp. jejuni 81-176 UDP-N-acetylglucosamine acyltransferase YP_999989.1 256716 D 354242 CDS YP_999990.1 121613694 4682665 257500..258723 1 NC_008787.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 258723 clpX 4682665 clpX Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent protease ATP-binding subunit ClpX YP_999990.1 257500 D 354242 CDS YP_999991.1 121612694 4682198 258734..259774 1 NC_008787.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 259774 mreB 4682198 mreB Campylobacter jejuni subsp. jejuni 81-176 rod shape-determining protein MreB YP_999991.1 258734 D 354242 CDS YP_999992.1 121613456 4683676 259803..260513 1 NC_008787.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 260513 4683676 CJJ81176_0304 Campylobacter jejuni subsp. jejuni 81-176 rod shape-determining protein MreC YP_999992.1 259803 D 354242 CDS YP_999993.1 121612525 4682732 260774..264043 1 NC_008787.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 264043 carB 4682732 carB Campylobacter jejuni subsp. jejuni 81-176 carbamoyl phosphate synthase large subunit YP_999993.1 260774 D 354242 CDS YP_999994.1 121613686 4683307 264040..264462 1 NC_008787.1 hypothetical protein 264462 4683307 CJJ81176_0306 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_999994.1 264040 D 354242 CDS YP_999995.1 121612805 4682216 complement(264463..265440) 1 NC_008787.1 Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase 265440 tal 4682216 tal Campylobacter jejuni subsp. jejuni 81-176 transaldolase YP_999995.1 264463 R 354242 CDS YP_999996.1 121613049 4683543 complement(265440..266063) 1 NC_008787.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB 266063 serB 4683543 serB Campylobacter jejuni subsp. jejuni 81-176 phosphoserine phosphatase SerB YP_999996.1 265440 R 354242 CDS YP_999997.1 121612156 4683225 complement(266063..266584) 1 NC_008787.1 identified by match to protein family HMM PF01584; purine-binding chemotaxis protein CheW 266584 cheW 4683225 cheW Campylobacter jejuni subsp. jejuni 81-176 purine-binding chemotaxis protein CheW YP_999997.1 266063 R 354242 CDS YP_999998.1 121613274 4682610 complement(266589..268898) 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; chemotaxis protein CheA 268898 cheA 4682610 cheA Campylobacter jejuni subsp. jejuni 81-176 chemotaxis protein CheA YP_999998.1 266589 R 354242 CDS YP_999999.1 121612376 4682972 complement(268902..269858) 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF01584; chemotaxis protein CheV 269858 cheV 4682972 cheV Campylobacter jejuni subsp. jejuni 81-176 chemotaxis protein CheV YP_999999.1 268902 R 354242 CDS YP_001000000.1 121613574 4682281 complement(269851..270486) 1 NC_008787.1 hypothetical protein 270486 4682281 CJJ81176_0312 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000000.1 269851 R 354242 CDS YP_001000001.1 121612714 4682793 complement(270619..271104) 1 NC_008787.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 271104 greA 4682793 greA Campylobacter jejuni subsp. jejuni 81-176 transcription elongation factor GreA YP_001000001.1 270619 R 354242 CDS YP_001000002.1 121612105 4683657 complement(271116..272210) 1 NC_008787.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; ipid-A-disaccharide synthase 272210 lpxB 4683657 lpxB Campylobacter jejuni subsp. jejuni 81-176 ipid-A-disaccharide synthase YP_001000002.1 271116 R 354242 CDS YP_001000003.1 121613001 4682380 complement(272307..273059) 1 NC_008787.1 major antigenic peptide PEB3 273059 4682380 CJJ81176_0315 Campylobacter jejuni subsp. jejuni 81-176 major antigenic peptide PEB3 YP_001000003.1 272307 R 354242 CDS YP_001000004.1 121612520 4683285 complement(273323..274219) 1 NC_008787.1 glycerol-3-phosphate transporter, authentic frameshift 274219 4683285 CJJ81176_0316 Campylobacter jejuni subsp. jejuni 81-176 glycerol-3-phosphate transporter, authentic frameshift YP_001000004.1 273323 R 354242 CDS YP_001000005.1 121613215 4683354 274474..275250 1 NC_008787.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 275250 surE 4683354 surE Campylobacter jejuni subsp. jejuni 81-176 stationary phase survival protein SurE YP_001000005.1 274474 D 354242 CDS YP_001000006.1 121612635 4683037 275240..275893 1 NC_008787.1 identified by match to protein family HMM PF00899; thiF family protein 275893 4683037 CJJ81176_0318 Campylobacter jejuni subsp. jejuni 81-176 thiF family protein YP_001000006.1 275240 D 354242 CDS YP_001000007.1 121613391 4683745 complement(275968..276348) 1 NC_008787.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 276348 panD 4683745 panD Campylobacter jejuni subsp. jejuni 81-176 aspartate alpha-decarboxylase YP_001000007.1 275968 R 354242 CDS YP_001000008.1 121612799 4682823 complement(276345..277193) 1 NC_008787.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 277193 panC 4682823 panC Campylobacter jejuni subsp. jejuni 81-176 pantoate--beta-alanine ligase YP_001000008.1 276345 R 354242 CDS YP_001000009.1 121613376 4683549 complement(277204..278028) 1 NC_008787.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 278028 panB 4683549 panB Campylobacter jejuni subsp. jejuni 81-176 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001000009.1 277204 R 354242 CDS YP_001000010.1 121613185 4682846 complement(278185..279075) 1 NC_008787.1 identified by match to protein family HMM PF00005; molybdenum ABC transporter, ATP-binding protein 279075 modC 4682846 modC Campylobacter jejuni subsp. jejuni 81-176 molybdenum ABC transporter, ATP-binding protein YP_001000010.1 278185 R 354242 CDS YP_001000011.1 121612180 4683066 complement(279085..279753) 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02141; molybdenum ABC transporter, permease protein 279753 modB 4683066 modB Campylobacter jejuni subsp. jejuni 81-176 molybdenum ABC transporter, permease protein YP_001000011.1 279085 R 354242 CDS YP_001000012.1 121612132 4682681 complement(279746..280051) 1 NC_008787.1 identified by match to protein family HMM PF03459; TOBE domain-containing protein 280051 4682681 CJJ81176_0324 Campylobacter jejuni subsp. jejuni 81-176 TOBE domain-containing protein YP_001000012.1 279746 R 354242 CDS YP_001000013.1 121613272 4682496 complement(280144..280893) 1 NC_008787.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdenum ABC transporter, periplasmic molybdenum-binding protein 280893 modA 4682496 modA Campylobacter jejuni subsp. jejuni 81-176 molybdenum ABC transporter, periplasmic molybdenum-binding protein YP_001000013.1 280144 R 354242 CDS YP_001000014.1 121612742 4682962 complement(280947..281633) 1 NC_008787.1 identified by match to protein family HMM TIGR02072; biotin biosynthesis protein BioC 281633 4682962 CJJ81176_0326 Campylobacter jejuni subsp. jejuni 81-176 biotin biosynthesis protein BioC YP_001000014.1 280947 R 354242 CDS YP_001000015.1 121613050 4683600 complement(281630..282241) 1 NC_008787.1 identified by match to protein family HMM PF04301; hypothetical protein 282241 4683600 CJJ81176_0327 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000015.1 281630 R 354242 CDS YP_001000016.1 121613739 4683220 complement(282238..283380) 1 NC_008787.1 identified by match to protein family HMM PF00155; 8-amino-7-oxononanoate synthase 283380 bioF 4683220 bioF Campylobacter jejuni subsp. jejuni 81-176 8-amino-7-oxononanoate synthase YP_001000016.1 282238 R 354242 CDS YP_001000017.1 121613473 4682316 283447..284730 1 NC_008787.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase 284730 bioA 4682316 bioA Campylobacter jejuni subsp. jejuni 81-176 adenosylmethionine--8-amino-7-oxononanoate transaminase YP_001000017.1 283447 D 354242 CDS YP_001000018.1 121612750 4683435 complement(284717..285322) 1 NC_008787.1 identified by match to protein family HMM TIGR00347; dethiobiotin synthetase 285322 bioD 4683435 bioD Campylobacter jejuni subsp. jejuni 81-176 dethiobiotin synthetase YP_001000018.1 284717 R 354242 CDS YP_001000019.1 121612529 4683604 complement(285332..285646) 1 NC_008787.1 identified by match to protein family HMM PF00893; SMR family multidrug efflux pump 285646 4683604 CJJ81176_0331 Campylobacter jejuni subsp. jejuni 81-176 SMR family multidrug efflux pump YP_001000019.1 285332 R 354242 CDS YP_001000020.1 121613021 4683265 complement(285650..285988) 1 NC_008787.1 identified by match to protein family HMM PF00893; SMR family multidrug efflux pump 285988 4683265 CJJ81176_0332 Campylobacter jejuni subsp. jejuni 81-176 SMR family multidrug efflux pump YP_001000020.1 285650 R 354242 CDS YP_001000021.1 121612154 4683271 286122..286658 1 NC_008787.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 286658 rplY 4683271 rplY Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L25/general stress protein Ctc YP_001000021.1 286122 D 354242 CDS YP_001000022.1 121613036 4682510 286655..287200 1 NC_008787.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 287200 pth 4682510 pth Campylobacter jejuni subsp. jejuni 81-176 peptidyl-tRNA hydrolase YP_001000022.1 286655 D 354242 CDS YP_001000023.1 121612521 4683246 287202..288260 1 NC_008787.1 identified by match to protein family HMM PF03739; hypothetical protein 288260 4683246 CJJ81176_0335 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000023.1 287202 D 354242 CDS YP_001000024.1 121612594 4683355 288304..289512 1 NC_008787.1 identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 289512 lysA 4683355 lysA Campylobacter jejuni subsp. jejuni 81-176 diaminopimelate decarboxylase YP_001000024.1 288304 D 354242 CDS YP_001000025.1 121613546 4682125 289514..290281 1 NC_008787.1 identified by match to protein family HMM TIGR01460; HAD family hydrolase 290281 4682125 CJJ81176_0337 Campylobacter jejuni subsp. jejuni 81-176 HAD family hydrolase YP_001000025.1 289514 D 354242 CDS YP_001000026.1 121612831 4682110 290269..291342 1 NC_008787.1 identified by match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM TIGR01807; chorismate mutase/prephenate dehydratase 291342 pheA 4682110 pheA Campylobacter jejuni subsp. jejuni 81-176 chorismate mutase/prephenate dehydratase YP_001000026.1 290269 D 354242 CDS YP_001000027.1 121613599 4683506 291332..292426 1 NC_008787.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 292426 hisC 4683506 hisC Campylobacter jejuni subsp. jejuni 81-176 histidinol-phosphate aminotransferase YP_001000027.1 291332 D 354242 CDS YP_001000028.1 121612614 4683375 292478..294160 1 NC_008787.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 294160 fliF 4683375 fliF Campylobacter jejuni subsp. jejuni 81-176 flagellar MS-ring protein YP_001000028.1 292478 D 354242 CDS YP_001000029.1 121613519 4682226 294160..295188 1 NC_008787.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 295188 fliG 4682226 fliG Campylobacter jejuni subsp. jejuni 81-176 flagellar motor switch protein G YP_001000029.1 294160 D 354242 CDS YP_001000030.1 121613227 4682116 295196..296026 1 NC_008787.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 296026 fliH 4682116 fliH Campylobacter jejuni subsp. jejuni 81-176 flagellar assembly protein H YP_001000030.1 295196 D 354242 CDS YP_001000031.1 121613549 4683029 296019..297866 1 NC_008787.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 297866 dxs 4683029 dxs Campylobacter jejuni subsp. jejuni 81-176 1-deoxy-D-xylulose-5-phosphate synthase YP_001000031.1 296019 D 354242 CDS YP_001000032.1 121612833 4682109 297952..298362 1 NC_008787.1 identified by match to protein family HMM PF01475; FUR family transcriptional regulator 298362 4682109 CJJ81176_0344 Campylobacter jejuni subsp. jejuni 81-176 FUR family transcriptional regulator YP_001000032.1 297952 D 354242 CDS YP_001000033.1 121613735 4683495 298408..299604 1 NC_008787.1 hypothetical protein 299604 4683495 CJJ81176_0345 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000033.1 298408 D 354242 CDS YP_001000034.1 121612772 4683098 299607..300314 1 NC_008787.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 300314 ubiE 4683098 ubiE Campylobacter jejuni subsp. jejuni 81-176 ubiquinone/menaquinone biosynthesis methyltransferase YP_001000034.1 299607 D 354242 CDS YP_001000035.1 121613063 4683572 300311..301474 1 NC_008787.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 301474 xseA 4683572 xseA Campylobacter jejuni subsp. jejuni 81-176 exodeoxyribonuclease VII large subunit YP_001000035.1 300311 D 354242 CDS YP_001000036.1 121612480 4683215 301484..302560 1 NC_008787.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 302560 serC 4683215 serC Campylobacter jejuni subsp. jejuni 81-176 phosphoserine aminotransferase YP_001000036.1 301484 D 354242 CDS YP_001000037.1 121613465 4683682 302557..302907 1 NC_008787.1 identified by match to protein family HMM PF01042; endoribonuclease L-PSP family protein 302907 4683682 CJJ81176_0349 Campylobacter jejuni subsp. jejuni 81-176 endoribonuclease L-PSP family protein YP_001000037.1 302557 D 354242 CDS YP_001000038.1 121613165 4682943 complement(302904..303878) 1 NC_008787.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 303878 fabH 4682943 fabH Campylobacter jejuni subsp. jejuni 81-176 3-oxoacyl-(acyl carrier protein) synthase III YP_001000038.1 302904 R 354242 CDS YP_001000039.1 121612547 4682796 complement(303871..304857) 1 NC_008787.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 304857 plsX 4682796 plsX Campylobacter jejuni subsp. jejuni 81-176 putative glycerol-3-phosphate acyltransferase PlsX YP_001000039.1 303871 R 354242 CDS YP_001000040.1 121613299 4683090 complement(304863..305009) 1 NC_008787.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 305009 rpmF 4683090 rpmF Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L32 YP_001000040.1 304863 R 354242 CDS YP_001000041.1 121612324 4682937 complement(305033..305386) 1 NC_008787.1 hypothetical protein 305386 4682937 CJJ81176_0353 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000041.1 305033 R 354242 CDS YP_001000042.1 121613085 4682366 complement(305387..305800) 1 NC_008787.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 305800 ndk 4682366 ndk Campylobacter jejuni subsp. jejuni 81-176 nucleoside diphosphate kinase YP_001000042.1 305387 R 354242 CDS YP_001000043.1 121612302 4683189 complement(305913..306197) 1 NC_008787.1 identified by match to protein family HMM PF00037; ferredoxin, 4Fe-4S 306197 4683189 CJJ81176_0355 Campylobacter jejuni subsp. jejuni 81-176 ferredoxin, 4Fe-4S YP_001000043.1 305913 R 354242 CDS YP_001000044.1 121613748 4682424 306403..306999 1 NC_008787.1 identified by match to protein family HMM PF00578; anti-oxidant AhpCTSA family protein 306999 4682424 CJJ81176_0356 Campylobacter jejuni subsp. jejuni 81-176 anti-oxidant AhpCTSA family protein YP_001000044.1 306403 D 354242 CDS YP_001000045.1 121613536 4682192 307118..308224 1 NC_008787.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 308224 flhB 4682192 flhB Campylobacter jejuni subsp. jejuni 81-176 flagellar biosynthesis protein FlhB YP_001000045.1 307118 D 354242 CDS YP_001000046.1 121612816 4682104 complement(308211..308954) 1 NC_008787.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 308954 motB 4682104 motB Campylobacter jejuni subsp. jejuni 81-176 flagellar motor protein MotB YP_001000046.1 308211 R 354242 CDS YP_001000047.1 121612656 4683521 complement(308957..309733) 1 NC_008787.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 309733 4683521 CJJ81176_0359 Campylobacter jejuni subsp. jejuni 81-176 flagellar motor protein MotA YP_001000047.1 308957 R 354242 CDS YP_001000048.1 121613724 4683714 complement(309749..312388) 1 NC_008787.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 312388 polA 4683714 polA Campylobacter jejuni subsp. jejuni 81-176 DNA polymerase I YP_001000048.1 309749 R 354242 CDS YP_001000049.1 121612794 4682554 312552..312764 1 NC_008787.1 major facilitator family transporter 312764 4682554 CJJ81176_0361 Campylobacter jejuni subsp. jejuni 81-176 major facilitator family transporter YP_001000049.1 312552 D 354242 CDS YP_001000050.1 121613375 4683540 312848..312964 1 NC_008787.1 inner membrane metabolite transport protein YdfJ 312964 4683540 CJJ81176_0362 Campylobacter jejuni subsp. jejuni 81-176 inner membrane metabolite transport protein YdfJ YP_001000050.1 312848 D 354242 CDS YP_001000051.1 121613278 4682837 313004..313912 1 NC_008787.1 inner membrane metabolite transport protein YdfJ 313912 4682837 CJJ81176_0363 Campylobacter jejuni subsp. jejuni 81-176 inner membrane metabolite transport protein YdfJ YP_001000051.1 313004 D 354242 CDS YP_001000052.1 121612749 4682964 313909..314916 1 NC_008787.1 identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase family protein 314916 4682964 CJJ81176_0364 Campylobacter jejuni subsp. jejuni 81-176 inosine-uridine preferring nucleoside hydrolase family protein YP_001000052.1 313909 D 354242 CDS YP_001000053.1 121613679 4683607 complement(314872..315315) 1 NC_008787.1 hypothetical protein 315315 4683607 CJJ81176_0365 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000053.1 314872 R 354242 CDS YP_001000054.1 121612998 4682340 complement(315320..318145) 1 NC_008787.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 318145 uvrA 4682340 uvrA Campylobacter jejuni subsp. jejuni 81-176 excinuclease ABC subunit A YP_001000054.1 315320 R 354242 CDS YP_001000055.1 121612892 4683292 complement(318218..319003) 1 NC_008787.1 identified by match to protein family HMM PF01925; hypothetical protein 319003 4683292 CJJ81176_0367 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000055.1 318218 R 354242 CDS YP_001000056.1 121613263 4683432 319126..319251 1 NC_008787.1 hypothetical protein 319251 4683432 CJJ81176_0368 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000056.1 319126 D 354242 CDS YP_001000057.1 121612335 4682977 319416..320666 1 NC_008787.1 identified by match to protein family HMM PF00425; anthranilate synthase component I 320666 trpE 4682977 trpE Campylobacter jejuni subsp. jejuni 81-176 anthranilate synthase component I YP_001000057.1 319416 D 354242 CDS YP_001000058.1 121612640 4682354 320663..322264 1 NC_008787.1 identified by match to protein family HMM PF00117; match to protein family HMM PF00591; match to protein family HMM TIGR00566; match to protein family HMM TIGR01245; anthranilate synthase component II 322264 trpD 4682354 trpD Campylobacter jejuni subsp. jejuni 81-176 anthranilate synthase component II YP_001000058.1 320663 D 354242 CDS YP_001000059.1 121613403 4683726 322251..322850 1 NC_008787.1 identified by match to protein family HMM PF00697; N-(5'phosphoribosyl)anthranilate isomerase 322850 trpF 4683726 trpF Campylobacter jejuni subsp. jejuni 81-176 N-(5'phosphoribosyl)anthranilate isomerase YP_001000059.1 322251 D 354242 CDS YP_001000060.1 121612226 4682819 322847..324025 1 NC_008787.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 324025 trpB 4682819 trpB Campylobacter jejuni subsp. jejuni 81-176 tryptophan synthase subunit beta YP_001000060.1 322847 D 354242 CDS YP_001000061.1 121613100 4682566 324018..324767 1 NC_008787.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 324767 trpA 4682566 trpA Campylobacter jejuni subsp. jejuni 81-176 tryptophan synthase subunit alpha YP_001000061.1 324018 D 354242 CDS YP_001000062.1 121612741 4683163 324838..325260 1 NC_008787.1 hypothetical protein 325260 4683163 CJJ81176_0374 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000062.1 324838 D 354242 CDS YP_001000063.1 121613695 4683621 325260..325568 1 NC_008787.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 325568 fliN 4683621 fliN Campylobacter jejuni subsp. jejuni 81-176 flagellar motor switch protein YP_001000063.1 325260 D 354242 CDS YP_001000064.1 121613484 4682199 325569..326366 1 NC_008787.1 hypothetical protein 326366 4682199 CJJ81176_0376 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000064.1 325569 D 354242 CDS YP_001000065.1 121613352 4682726 complement(326363..327823) 1 NC_008787.1 identified by match to protein family HMM PF02541; Ppx/GppA family phosphatase 327823 4682726 CJJ81176_0377 Campylobacter jejuni subsp. jejuni 81-176 Ppx/GppA family phosphatase YP_001000065.1 326363 R 354242 CDS YP_001000066.1 121613118 4682870 complement(327823..328068) 1 NC_008787.1 identified by match to protein family HMM PF00037; ferredoxin, 4Fe-4S 328068 4682870 CJJ81176_0378 Campylobacter jejuni subsp. jejuni 81-176 ferredoxin, 4Fe-4S YP_001000066.1 327823 R 354242 CDS YP_001000067.1 121612439 4683153 complement(328181..328852) 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 328852 4683153 CJJ81176_0379 Campylobacter jejuni subsp. jejuni 81-176 DNA-binding response regulator YP_001000067.1 328181 R 354242 CDS YP_001000068.1 121612949 4682186 complement(328931..329248) 1 NC_008787.1 identified by match to protein family HMM PF02152; FolB domain-containing protein 329248 4682186 CJJ81176_0380 Campylobacter jejuni subsp. jejuni 81-176 FolB domain-containing protein YP_001000068.1 328931 R 354242 CDS YP_001000069.1 121612889 4683361 complement(329233..329841) 1 NC_008787.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 329841 4683361 CJJ81176_0381 Campylobacter jejuni subsp. jejuni 81-176 putative glycerol-3-phosphate acyltransferase PlsY YP_001000069.1 329233 R 354242 CDS YP_001000070.1 121612870 4683423 330036..331061 1 NC_008787.1 identified by match to protein family HMM PF03150; cytochrome c551 peroxidase 331061 ccpA-2 4683423 ccpA-2 Campylobacter jejuni subsp. jejuni 81-176 cytochrome c551 peroxidase YP_001000070.1 330036 D 354242 CDS YP_001000071.1 121613327 4683452 331137..332492 1 NC_008787.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 332492 glmM 4683452 glmM Campylobacter jejuni subsp. jejuni 81-176 phosphoglucosamine mutase YP_001000071.1 331137 D 354242 CDS YP_001000072.1 121612661 4682903 332485..332955 1 NC_008787.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 332955 lspA 4682903 lspA Campylobacter jejuni subsp. jejuni 81-176 lipoprotein signal peptidase YP_001000072.1 332485 D 354242 CDS YP_001000073.1 121612167 4683719 332939..333391 1 NC_008787.1 identified by match to protein family HMM PF03653; match to protein family HMM TIGR00701; hypothetical protein 333391 4683719 CJJ81176_0385 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000073.1 332939 D 354242 CDS YP_001000074.1 121613094 4682658 complement(333388..334734) 1 NC_008787.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 334734 4682658 CJJ81176_0386 Campylobacter jejuni subsp. jejuni 81-176 coproporphyrinogen III oxidase YP_001000074.1 333388 R 354242 CDS YP_001000075.1 121613250 4683184 334863..335114 1 NC_008787.1 hypothetical protein 335114 4683184 CJJ81176_0387 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000075.1 334863 D 354242 CDS YP_001000076.1 121612467 4683000 complement(335137..336615) 1 NC_008787.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; RND efflux system, outer membrane lipoprotein CmeC 336615 cmeC 4683000 cmeC Campylobacter jejuni subsp. jejuni 81-176 RND efflux system, outer membrane lipoprotein CmeC YP_001000076.1 335137 R 354242 CDS YP_001000077.1 121612937 4682137 complement(336608..339730) 1 NC_008787.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; RND efflux system, inner membrane transporter CmeB 339730 cmeB 4682137 cmeB Campylobacter jejuni subsp. jejuni 81-176 RND efflux system, inner membrane transporter CmeB YP_001000077.1 336608 R 354242 CDS YP_001000078.1 121612236 4683757 complement(339730..340833) 1 NC_008787.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND efflux system, membrane fusion protein CmeA 340833 cmeA 4683757 cmeA Campylobacter jejuni subsp. jejuni 81-176 RND efflux system, membrane fusion protein CmeA YP_001000078.1 339730 R 354242 CDS YP_001000079.1 121612760 4682564 complement(340928..341560) 1 NC_008787.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 341560 4682564 CJJ81176_0391 Campylobacter jejuni subsp. jejuni 81-176 TetR family transcriptional regulator YP_001000079.1 340928 R 354242 CDS YP_001000080.1 121613062 4683590 complement(341547..342923) 1 NC_008787.1 identified by match to protein family HMM PF00037; match to protein family HMM TIGR02745; iron-sulfur cluster-binding domain-containing protein 342923 4683590 CJJ81176_0392 Campylobacter jejuni subsp. jejuni 81-176 iron-sulfur cluster-binding domain-containing protein YP_001000080.1 341547 R 354242 CDS YP_001000081.1 121612844 4683214 343082..343294 1 NC_008787.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 343294 rpsU 4683214 rpsU Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S21 YP_001000081.1 343082 D 354242 CDS YP_001000082.1 121613566 4683490 complement(343291..343437) 1 NC_008787.1 colicin E1 immunity protein 343437 4683490 CJJ81176_0394 Campylobacter jejuni subsp. jejuni 81-176 colicin E1 immunity protein YP_001000082.1 343291 R 354242 CDS YP_001000083.1 121612622 4682832 343411..344016 1 NC_008787.1 hypothetical protein 344016 4682832 CJJ81176_0395 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000083.1 343411 D 354242 CDS YP_001000084.1 121613449 4682140 344026..345195 1 NC_008787.1 identified by match to protein family HMM PF03738; glutathionylspermidine synthase family protein 345195 4682140 CJJ81176_0396 Campylobacter jejuni subsp. jejuni 81-176 glutathionylspermidine synthase family protein YP_001000084.1 344026 D 354242 CDS YP_001000085.1 121613285 4682737 345198..346133 1 NC_008787.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 346133 4682737 CJJ81176_0397 Campylobacter jejuni subsp. jejuni 81-176 2-hydroxyacid dehydrogenase YP_001000085.1 345198 D 354242 CDS YP_001000086.1 121612347 4682959 346123..346614 1 NC_008787.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 346614 4682959 CJJ81176_0398 Campylobacter jejuni subsp. jejuni 81-176 putative nucleotide-binding protein YP_001000086.1 346123 D 354242 CDS YP_001000087.1 121613055 4682334 346623..347099 1 NC_008787.1 putative lipoprotein 347099 4682334 CJJ81176_0399 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000087.1 346623 D 354242 CDS YP_001000088.1 121612130 4683239 347110..347934 1 NC_008787.1 hypothetical protein 347934 4683239 CJJ81176_0400 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000088.1 347110 D 354242 CDS YP_001000089.1 121613485 4682481 347934..349646 1 NC_008787.1 identified by match to protein family HMM PF00004; ATPase, AAA family protein 349646 4682481 CJJ81176_0401 Campylobacter jejuni subsp. jejuni 81-176 ATPase, AAA family protein YP_001000089.1 347934 D 354242 CDS YP_001000090.1 121613477 4682727 complement(349611..350183) 1 NC_008787.1 identified by match to protein family HMM PF01794; hypothetical protein 350183 4682727 CJJ81176_0402 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000090.1 349611 R 354242 CDS YP_001000091.1 121612585 4683411 complement(350183..351076) 1 NC_008787.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 351076 4683411 CJJ81176_0403 Campylobacter jejuni subsp. jejuni 81-176 putative sulfite oxidase subunit YedY YP_001000091.1 350183 R 354242 CDS YP_001000092.1 121613342 4682606 complement(351131..351811) 1 NC_008787.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 351811 pyrF 4682606 pyrF Campylobacter jejuni subsp. jejuni 81-176 orotidine 5'-phosphate decarboxylase YP_001000092.1 351131 R 354242 CDS YP_001000093.1 121612229 4682884 complement(351808..352206) 1 NC_008787.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 352206 nusB 4682884 nusB Campylobacter jejuni subsp. jejuni 81-176 transcription antitermination protein NusB YP_001000093.1 351808 R 354242 CDS YP_001000094.1 121613020 4682584 complement(352206..352670) 1 NC_008787.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 352670 ribH 4682584 ribH Campylobacter jejuni subsp. jejuni 81-176 6,7-dimethyl-8-ribityllumazine synthase YP_001000094.1 352206 R 354242 CDS YP_001000095.1 121612393 4683270 complement(352667..353482) 1 NC_008787.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 353482 kdsA 4683270 kdsA Campylobacter jejuni subsp. jejuni 81-176 2-dehydro-3-deoxyphosphooctonate aldolase YP_001000095.1 352667 R 354242 CDS YP_001000096.1 121612962 4682255 complement(353479..354411) 1 NC_008787.1 identified by match to protein family HMM PF00892; integral membrane protein 354411 4682255 CJJ81176_0408 Campylobacter jejuni subsp. jejuni 81-176 integral membrane protein YP_001000096.1 353479 R 354242 CDS YP_001000097.1 121612239 4683336 354512..355894 1 NC_008787.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 355894 engA 4683336 engA Campylobacter jejuni subsp. jejuni 81-176 GTP-binding protein EngA YP_001000097.1 354512 D 354242 CDS YP_001000098.1 121612763 4682536 355881..356378 1 NC_008787.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 356378 aroK 4682536 aroK Campylobacter jejuni subsp. jejuni 81-176 shikimate kinase YP_001000098.1 355881 D 354242 CDS YP_001000099.1 121613675 4683583 356375..357334 1 NC_008787.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 357334 trpS 4683583 trpS Campylobacter jejuni subsp. jejuni 81-176 tryptophanyl-tRNA synthetase YP_001000099.1 356375 D 354242 CDS YP_001000100.1 121613220 4682634 357345..358580 1 NC_008787.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 358580 serS 4682634 serS Campylobacter jejuni subsp. jejuni 81-176 seryl-tRNA synthetase YP_001000100.1 357345 D 354242 CDS YP_001000101.1 121612269 4683030 358590..361052 1 NC_008787.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; TPR domain-containing protein 361052 4683030 CJJ81176_0413 Campylobacter jejuni subsp. jejuni 81-176 TPR domain-containing protein YP_001000101.1 358590 D 354242 CDS YP_001000102.1 121613003 4682480 complement(361083..361718) 1 NC_008787.1 hypothetical protein 361718 4682480 CJJ81176_0414 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000102.1 361083 R 354242 CDS YP_001000103.1 121612912 4683291 complement(361816..363258) 1 NC_008787.1 identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 363258 pyk 4683291 pyk Campylobacter jejuni subsp. jejuni 81-176 pyruvate kinase YP_001000103.1 361816 R 354242 CDS YP_001000104.1 121613638 4683396 complement(363307..364653) 1 NC_008787.1 identified by match to protein family HMM PF01266; match to protein family HMM PF06039; malate:quinone oxidoreductase, putative 364653 4683396 CJJ81176_0416 Campylobacter jejuni subsp. jejuni 81-176 malate:quinone oxidoreductase, putative YP_001000104.1 363307 R 354242 CDS YP_001000105.1 121612678 4682117 complement(364772..365401) 1 NC_008787.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 365401 4682117 CJJ81176_0417 Campylobacter jejuni subsp. jejuni 81-176 pantothenate kinase YP_001000105.1 364772 R 354242 CDS YP_001000106.1 121613450 4683690 complement(365388..365678) 1 NC_008787.1 tram-like protein 365678 4683690 CJJ81176_0418 Campylobacter jejuni subsp. jejuni 81-176 tram-like protein YP_001000106.1 365388 R 354242 CDS YP_001000107.1 121612489 4682742 complement(365675..366673) 1 NC_008787.1 putative lipoprotein 366673 4682742 CJJ81176_0419 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000107.1 365675 R 354242 CDS YP_001000108.1 121613251 4683721 complement(366670..367248) 1 NC_008787.1 hypothetical protein 367248 4683721 CJJ81176_0420 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000108.1 366670 R 354242 CDS YP_001000109.1 121612234 4683001 367392..367676 1 NC_008787.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 367676 gatC 4683001 gatC Campylobacter jejuni subsp. jejuni 81-176 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001000109.1 367392 D 354242 CDS YP_001000110.1 121612184 4682543 367745..368308 1 NC_008787.1 identified by match to protein family HMM PF02674; cvpA family protein 368308 4682543 CJJ81176_0422 Campylobacter jejuni subsp. jejuni 81-176 cvpA family protein YP_001000110.1 367745 D 354242 CDS YP_001000111.1 121613164 4682662 368310..368783 1 NC_008787.1 identified by match to protein family HMM PF01475; ferric uptake regulation protein 368783 fur 4682662 fur Campylobacter jejuni subsp. jejuni 81-176 ferric uptake regulation protein YP_001000111.1 368310 D 354242 CDS YP_001000112.1 121612659 4682795 368784..370289 1 NC_008787.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 370289 lysS 4682795 lysS Campylobacter jejuni subsp. jejuni 81-176 lysyl-tRNA synthetase YP_001000112.1 368784 D 354242 CDS YP_001000113.1 121613405 4683711 370286..371530 1 NC_008787.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 371530 glyA 4683711 glyA Campylobacter jejuni subsp. jejuni 81-176 serine hydroxymethyltransferase YP_001000113.1 370286 D 354242 CDS YP_001000114.1 121612581 4682814 371527..372306 1 NC_008787.1 hypothetical protein 372306 4682814 CJJ81176_0427 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000114.1 371527 D 354242 CDS YP_001000115.1 121613408 4682654 372320..373156 1 NC_008787.1 identified by match to protein family HMM PF05036; hypothetical protein 373156 4682654 CJJ81176_0428 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000115.1 372320 D 354242 CDS YP_001000116.1 121613005 4682797 373153..373941 1 NC_008787.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 373941 aroE 4682797 aroE Campylobacter jejuni subsp. jejuni 81-176 shikimate 5-dehydrogenase YP_001000116.1 373153 D 354242 CDS YP_001000117.1 121613559 4683279 complement(374015..374914) 1 NC_008787.1 putative lipoprotein 374914 4683279 CJJ81176_0430 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000117.1 374015 R 354242 CDS YP_001000118.1 121613223 4682139 375004..375819 1 NC_008787.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 375819 lgt 4682139 lgt Campylobacter jejuni subsp. jejuni 81-176 prolipoprotein diacylglyceryl transferase YP_001000118.1 375004 D 354242 CDS YP_001000119.1 121612270 4683035 375889..376671 1 NC_008787.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 376671 frdC 4683035 frdC Campylobacter jejuni subsp. jejuni 81-176 fumarate reductase cytochrome b-556 subunit YP_001000119.1 375889 D 354242 CDS YP_001000120.1 121612275 4682475 376655..378646 1 NC_008787.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 378646 frdA 4682475 frdA Campylobacter jejuni subsp. jejuni 81-176 fumarate reductase flavoprotein subunit YP_001000120.1 376655 D 354242 CDS YP_001000121.1 121613625 4682472 378639..379364 1 NC_008787.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 379364 frdB 4682472 frdB Campylobacter jejuni subsp. jejuni 81-176 fumarate reductase iron-sulfur subunit YP_001000121.1 378639 D 354242 CDS YP_001000122.1 121612321 4683144 379392..381578 1 NC_008787.1 identified by match to protein family HMM PF00350; match to protein family HMM PF01926; GTP-binding protein 381578 4683144 CJJ81176_0435 Campylobacter jejuni subsp. jejuni 81-176 GTP-binding protein YP_001000122.1 379392 D 354242 CDS YP_001000123.1 121613312 4682369 381688..383397 1 NC_008787.1 identified by match to protein family HMM PF00350; match to protein family HMM PF01926; GTP-binding protein 383397 4682369 CJJ81176_0436 Campylobacter jejuni subsp. jejuni 81-176 GTP-binding protein YP_001000123.1 381688 D 354242 CDS YP_001000124.1 121612488 4682918 383397..384101 1 NC_008787.1 hypothetical protein 384101 4682918 CJJ81176_0437 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000124.1 383397 D 354242 CDS YP_001000125.1 121613212 4683720 384237..384965 1 NC_008787.1 hypothetical protein 384965 4683720 CJJ81176_0438 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000125.1 384237 D 354242 CDS YP_001000126.1 121612363 4683040 384967..386688 1 NC_008787.1 identified by match to protein family HMM PF00732; oxidoreductase, putative 386688 4683040 CJJ81176_0439 Campylobacter jejuni subsp. jejuni 81-176 oxidoreductase, putative YP_001000126.1 384967 D 354242 CDS YP_001000127.1 121613297 4682297 386977..387168 1 NC_008787.1 hypothetical protein 387168 4682297 CJJ81176_0440 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000127.1 386977 D 354242 CDS YP_001000128.1 121613101 4682955 complement(387247..387972) 1 NC_008787.1 hypothetical protein 387972 4682955 CJJ81176_0441 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000128.1 387247 R 354242 CDS YP_001000129.1 121612369 4683164 388079..388441 1 NC_008787.1 HIT family protein 388441 4683164 CJJ81176_0442 Campylobacter jejuni subsp. jejuni 81-176 HIT family protein YP_001000129.1 388079 D 354242 CDS YP_001000130.1 121612795 4682286 388515..389087 1 NC_008787.1 identified by match to protein family HMM PF04264; hypothetical protein 389087 4682286 CJJ81176_0443 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000130.1 388515 D 354242 CDS YP_001000131.1 121612299 4683541 complement(389091..390047) 1 NC_008787.1 hypothetical protein 390047 4683541 CJJ81176_0444 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000131.1 389091 R 354242 CDS YP_001000132.1 121612605 4682435 390020..390169 1 NC_008787.1 hypothetical protein 390169 4682435 CJJ81176_0445 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000132.1 390020 D 354242 CDS YP_001000133.1 121613582 4682348 390215..391792 1 NC_008787.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 391792 4682348 CJJ81176_0446 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein YP_001000133.1 390215 D 354242 CDS YP_001000134.1 121613189 4683240 391785..392117 1 NC_008787.1 hypothetical protein 392117 4683240 CJJ81176_0447 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000134.1 391785 D 354242 CDS YP_001000135.1 121612462 4683062 392193..392576 1 NC_008787.1 hypothetical protein 392576 4683062 CJJ81176_0448 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000135.1 392193 D 354242 CDS YP_001000136.1 121612973 4682143 complement(392620..393204) 1 NC_008787.1 identified by match to protein family HMM PF01205; hypothetical protein 393204 4682143 CJJ81176_0449 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000136.1 392620 R 354242 CDS YP_001000137.1 121612150 4683325 393331..394557 1 NC_008787.1 hypothetical protein 394557 4683325 CJJ81176_0450 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000137.1 393331 D 354242 CDS YP_001000138.1 121612131 4682579 394550..395287 1 NC_008787.1 hypothetical protein 395287 4682579 CJJ81176_0451 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000138.1 394550 D 354242 CDS YP_001000139.1 121612898 4682184 complement(401151..401303) 1 NC_008787.1 hypothetical protein 401303 4682184 CJJ81176_0456 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000139.1 401151 R 354242 CDS YP_001000140.1 121612791 4682142 complement(401632..402840) 1 NC_008787.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 402840 murD 4682142 murD Campylobacter jejuni subsp. jejuni 81-176 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001000140.1 401632 R 354242 CDS YP_001000141.1 121613713 4683555 complement(402840..403901) 1 NC_008787.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 403901 mraY 4683555 mraY Campylobacter jejuni subsp. jejuni 81-176 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001000141.1 402840 R 354242 CDS YP_001000142.1 121612982 4682786 403981..405459 1 NC_008787.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 405459 pgm 4682786 pgm Campylobacter jejuni subsp. jejuni 81-176 phosphoglyceromutase YP_001000142.1 403981 D 354242 CDS YP_001000143.1 121612315 4683308 405531..406274 1 NC_008787.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 406274 fabG 4683308 fabG Campylobacter jejuni subsp. jejuni 81-176 3-ketoacyl-(acyl-carrier-protein) reductase YP_001000143.1 405531 D 354242 CDS YP_001000144.1 121612251 4682390 406284..406691 1 NC_008787.1 identified by match to protein family HMM PF01243; hypothetical protein 406691 4682390 CJJ81176_0462 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000144.1 406284 D 354242 CDS YP_001000145.1 121613173 4682784 407028..408863 1 NC_008787.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM TIGR01409; succinate dehydrogenase, flavoprotein subunit 408863 sdhA 4682784 sdhA Campylobacter jejuni subsp. jejuni 81-176 succinate dehydrogenase, flavoprotein subunit YP_001000145.1 407028 D 354242 CDS YP_001000146.1 121612437 4683096 408860..409825 1 NC_008787.1 identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; succinate dehydrogenase, iron-sulfur protein subunit 409825 sdhB 4683096 sdhB Campylobacter jejuni subsp. jejuni 81-176 succinate dehydrogenase, iron-sulfur protein subunit YP_001000146.1 408860 D 354242 CDS YP_001000147.1 121613438 4682195 409829..410686 1 NC_008787.1 identified by match to protein family HMM PF02754; succinate dehydrogenase, C subunit 410686 sdhC 4682195 sdhC Campylobacter jejuni subsp. jejuni 81-176 succinate dehydrogenase, C subunit YP_001000147.1 409829 D 354242 CDS YP_001000148.1 121612526 4682740 complement(410710..411375) 1 NC_008787.1 identified by match to protein family HMM PF03070; TenA/Thi-4 family protein 411375 4682740 CJJ81176_0466 Campylobacter jejuni subsp. jejuni 81-176 TenA/Thi-4 family protein YP_001000148.1 410710 R 354242 CDS YP_001000149.1 121613287 4683256 411353..411469 1 NC_008787.1 hypothetical protein 411469 4683256 CJJ81176_0467 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000149.1 411353 D 354242 CDS YP_001000150.1 121612665 4682949 411488..411721 1 NC_008787.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 411721 acpP 4682949 acpP Campylobacter jejuni subsp. jejuni 81-176 acyl carrier protein YP_001000150.1 411488 D 354242 CDS YP_001000151.1 121613487 4683703 411747..412961 1 NC_008787.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 412961 fabF 4683703 fabF Campylobacter jejuni subsp. jejuni 81-176 3-oxoacyl-(acyl carrier protein) synthase II YP_001000151.1 411747 D 354242 CDS YP_001000152.1 121612933 4682708 412963..413901 1 NC_008787.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 413901 accA 4682708 accA Campylobacter jejuni subsp. jejuni 81-176 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001000152.1 412963 D 354242 CDS YP_001000153.1 121612217 4683395 413993..416107 1 NC_008787.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor, putative, degenerate 416107 4683395 CJJ81176_0471 Campylobacter jejuni subsp. jejuni 81-176 TonB-dependent receptor, putative, degenerate YP_001000153.1 413993 D 354242 CDS YP_001000154.1 121612700 4682596 416190..416786 1 NC_008787.1 identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052; NUDIX domain-containing protein 416786 4682596 CJJ81176_0472 Campylobacter jejuni subsp. jejuni 81-176 NUDIX domain-containing protein YP_001000154.1 416190 D 354242 CDS YP_001000155.1 121613235 4683659 complement(416818..417915) 1 NC_008787.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 417915 4683659 CJJ81176_0473 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_001000155.1 416818 R 354242 CDS YP_001000156.1 121612826 4683015 complement(417925..418140) 1 NC_008787.1 identified by match to protein family HMM PF04325; hypothetical protein 418140 4683015 CJJ81176_0474 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000156.1 417925 R 354242 CDS YP_001000157.1 121613410 4683515 complement(418323..418517) 1 NC_008787.1 required for 70S ribosome assembly; 50S ribosomal protein L28 418517 rpmB 4683515 rpmB Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L28 YP_001000157.1 418323 R 354242 CDS YP_001000158.1 121612304 4682769 418657..419304 1 NC_008787.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 419304 rpe 4682769 rpe Campylobacter jejuni subsp. jejuni 81-176 ribulose-phosphate 3-epimerase YP_001000158.1 418657 D 354242 CDS YP_001000159.1 121612917 4682411 419301..420062 1 NC_008787.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 420062 4682411 CJJ81176_0477 Campylobacter jejuni subsp. jejuni 81-176 DNA polymerase III subunit epsilon YP_001000159.1 419301 D 354242 CDS YP_001000160.1 121613325 4683455 420245..421537 1 NC_008787.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 421537 thiC 4683455 thiC Campylobacter jejuni subsp. jejuni 81-176 thiamine biosynthesis protein ThiC YP_001000160.1 420245 D 354242 CDS YP_001000161.1 121613409 4682909 complement(421529..422047) 1 NC_008787.1 hypothetical protein 422047 4682909 CJJ81176_0479 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000161.1 421529 R 354242 CDS YP_001000162.1 121612456 4682798 complement(422037..422564) 1 NC_008787.1 hypothetical protein 422564 4682798 CJJ81176_0480 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000162.1 422037 R 354242 CDS YP_001000163.1 121612691 4682149 complement(422561..423520) 1 NC_008787.1 hypothetical protein 423520 4682149 CJJ81176_0481 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000163.1 422561 R 354242 CDS YP_001000164.1 121613056 4683681 complement(423522..424172) 1 NC_008787.1 identified by match to protein family HMM PF04028; hypothetical protein 424172 4683681 CJJ81176_0482 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000164.1 423522 R 354242 CDS YP_001000165.1 121613595 4683234 complement(424135..425436) 1 NC_008787.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 425436 miaB 4683234 miaB Campylobacter jejuni subsp. jejuni 81-176 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001000165.1 424135 R 354242 CDS YP_001000166.1 121613328 4683373 complement(425433..425675) 1 NC_008787.1 hypothetical protein 425675 4683373 CJJ81176_0484 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000166.1 425433 R 354242 CDS YP_001000167.1 121612185 4682896 425803..426891 1 NC_008787.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 426891 nusA 4682896 nusA Campylobacter jejuni subsp. jejuni 81-176 transcription elongation factor NusA YP_001000167.1 425803 D 354242 CDS YP_001000168.1 121613511 4682663 complement(426907..428094) 1 NC_008787.1 identified by match to protein family HMM PF04332; match to protein family HMM PF07690; transporter, putative 428094 4682663 CJJ81176_0486 Campylobacter jejuni subsp. jejuni 81-176 transporter, putative YP_001000168.1 426907 R 354242 CDS YP_001000169.1 121612400 4682688 428168..429214 1 NC_008787.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; hypothetical protein 429214 4682688 CJJ81176_0487 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000169.1 428168 D 354242 CDS YP_001000170.1 121613016 4682244 429214..430434 1 NC_008787.1 identified by match to protein family HMM PF05193; peptidase, putative 430434 4682244 CJJ81176_0488 Campylobacter jejuni subsp. jejuni 81-176 peptidase, putative YP_001000170.1 429214 D 354242 CDS YP_001000171.1 121612291 4683268 430424..432247 1 NC_008787.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 432247 recG 4683268 recG Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent DNA helicase RecG YP_001000171.1 430424 D 354242 CDS YP_001000172.1 121613002 4682444 complement(432244..432627) 1 NC_008787.1 hypothetical protein 432627 4682444 CJJ81176_0490 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000172.1 432244 R 354242 CDS YP_001000173.1 121613208 4683290 432713..433318 1 NC_008787.1 identified by match to protein family HMM PF00027; putative transcriptional regulator 433318 4683290 CJJ81176_0491 Campylobacter jejuni subsp. jejuni 81-176 putative transcriptional regulator YP_001000173.1 432713 D 354242 CDS YP_001000174.1 121612476 4683042 433335..434036 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 434036 4683042 CJJ81176_0492 Campylobacter jejuni subsp. jejuni 81-176 His/Glu/Gln/Arg/opine ABC transporter permease YP_001000174.1 433335 D 354242 CDS YP_001000175.1 121612627 4682787 434029..434685 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 434685 4682787 CJJ81176_0493 Campylobacter jejuni subsp. jejuni 81-176 His/Glu/Gln/Arg/opine ABC transporter permease YP_001000175.1 434029 D 354242 CDS YP_001000176.1 121613136 4682161 434687..435424 1 NC_008787.1 identified by match to protein family HMM PF00005; amino acid ABC transporter, ATP-binding protein 435424 4682161 CJJ81176_0494 Campylobacter jejuni subsp. jejuni 81-176 amino acid ABC transporter, ATP-binding protein YP_001000176.1 434687 D 354242 CDS YP_001000177.1 121612430 4682314 436080..437279 1 NC_008787.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 437279 tuf 4682314 tuf Campylobacter jejuni subsp. jejuni 81-176 elongation factor Tu YP_001000177.1 436080 D 354242 CDS YP_001000178.1 121612954 4682200 437332..437490 1 NC_008787.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 437490 rpmG 4682200 rpmG Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L33 YP_001000178.1 437332 D 354242 CDS YP_001000179.1 121613109 4682597 437597..437776 1 NC_008787.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 437776 secE 4682597 secE Campylobacter jejuni subsp. jejuni 81-176 preprotein translocase subunit SecE YP_001000179.1 437597 D 354242 CDS YP_001000180.1 121613601 4683168 437786..438319 1 NC_008787.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 438319 nusG 4683168 nusG Campylobacter jejuni subsp. jejuni 81-176 transcription antitermination protein NusG YP_001000180.1 437786 D 354242 CDS YP_001000181.1 121613479 4683777 438345..438770 1 NC_008787.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 438770 rplK 4683777 rplK Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L11 YP_001000181.1 438345 D 354242 CDS YP_001000182.1 121612670 4682721 438825..439526 1 NC_008787.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 439526 rplA 4682721 rplA Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L1 YP_001000182.1 438825 D 354242 CDS YP_001000183.1 121612441 4683706 439678..440157 1 NC_008787.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 440157 rplJ 4683706 rplJ Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L10 YP_001000183.1 439678 D 354242 CDS YP_001000184.1 121613176 4682178 440178..440555 1 NC_008787.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 440555 rplL 4682178 rplL Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L7/L12 YP_001000184.1 440178 D 354242 CDS YP_001000185.1 121613040 4683081 440665..444801 1 NC_008787.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 444801 rpoB 4683081 rpoB Campylobacter jejuni subsp. jejuni 81-176 DNA-directed RNA polymerase subunit beta YP_001000185.1 440665 D 354242 CDS YP_001000186.1 121612351 4683228 444794..449347 1 NC_008787.1 identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase, beta' subunit 449347 rpoC 4683228 rpoC Campylobacter jejuni subsp. jejuni 81-176 DNA-directed RNA polymerase, beta' subunit YP_001000186.1 444794 D 354242 CDS YP_001000187.1 121613664 4682326 449467..449853 1 NC_008787.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 449853 rpsL 4682326 rpsL Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S12 YP_001000187.1 449467 D 354242 CDS YP_001000188.1 121612104 4682210 449923..450393 1 NC_008787.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 450393 rpsG 4682210 rpsG Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S7 YP_001000188.1 449923 D 354242 CDS YP_001000189.1 121612720 4682358 450406..452481 1 NC_008787.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 452481 fusA 4682358 fusA Campylobacter jejuni subsp. jejuni 81-176 elongation factor G YP_001000189.1 450406 D 354242 CDS YP_001000190.1 121613500 4682713 452604..452753 1 NC_008787.1 hypothetical protein 452753 4682713 CJJ81176_0515 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000190.1 452604 D 354242 CDS YP_001000191.1 121612928 4682699 452759..453460 1 NC_008787.1 identified by match to protein family HMM PF05175; hypothetical protein 453460 4682699 CJJ81176_0516 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000191.1 452759 D 354242 CDS YP_001000192.1 121613669 4683386 453450..453824 1 NC_008787.1 identified by match to protein family HMM PF03692; hypothetical protein 453824 4683386 CJJ81176_0517 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000192.1 453450 D 354242 CDS YP_001000193.1 121613186 4682673 453836..455074 1 NC_008787.1 putative lipoprotein 455074 4682673 CJJ81176_0518 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000193.1 453836 D 354242 CDS YP_001000194.1 121612469 4683069 455071..455847 1 NC_008787.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 455847 trpC 4683069 trpC Campylobacter jejuni subsp. jejuni 81-176 indole-3-glycerol-phosphate synthase YP_001000194.1 455071 D 354242 CDS YP_001000195.1 121613453 4682135 455857..456342 1 NC_008787.1 identified by match to protein family HMM PF01230; Hit family protein 456342 4682135 CJJ81176_0520 Campylobacter jejuni subsp. jejuni 81-176 Hit family protein YP_001000195.1 455857 D 354242 CDS YP_001000196.1 121612708 4682763 456332..457336 1 NC_008787.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 457336 ybbB 4682763 ybbB Campylobacter jejuni subsp. jejuni 81-176 tRNA 2-selenouridine synthase YP_001000196.1 456332 D 354242 CDS YP_001000197.1 121612259 4683653 complement(457709..457825) 1 NC_008787.1 hypothetical protein 457825 4683653 CJJ81176_0522 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000197.1 457709 R 354242 CDS YP_001000198.1 121612734 4682113 457960..458142 1 NC_008787.1 hypothetical protein 458142 4682113 CJJ81176_0523 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000198.1 457960 D 354242 CDS YP_001000199.1 121612498 4683627 458144..458299 1 NC_008787.1 putative periplasmic protein 458299 4683627 CJJ81176_0524 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000199.1 458144 D 354242 CDS YP_001000200.1 121612214 4683649 458296..458739 1 NC_008787.1 putative periplasmic protein 458739 4683649 CJJ81176_0525 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000200.1 458296 D 354242 CDS YP_001000201.1 121613112 4682603 458769..458885 1 NC_008787.1 putative periplasmic protein 458885 4682603 CJJ81176_0526 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000201.1 458769 D 354242 CDS YP_001000202.1 121612800 4683151 458930..459799 1 NC_008787.1 putative periplasmic protein 459799 4683151 CJJ81176_0527 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000202.1 458930 D 354242 CDS YP_001000203.1 121613750 4683535 460185..460313 1 NC_008787.1 hypothetical protein 460313 4683535 CJJ81176_0528 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000203.1 460185 D 354242 CDS YP_001000204.1 121612600 4682182 460410..462071 1 NC_008787.1 identified by match to protein family HMM PF05860; match to protein family HMM TIGR01901; putative periplasmic protein 462071 4682182 CJJ81176_0529 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000204.1 460410 D 354242 CDS YP_001000205.1 121612311 4682395 462333..463988 1 NC_008787.1 identified by match to protein family HMM PF01103; putative outer-membrane protein 463988 4682395 CJJ81176_0530 Campylobacter jejuni subsp. jejuni 81-176 putative outer-membrane protein YP_001000205.1 462333 D 354242 CDS YP_001000206.1 121612813 4682394 complement(463992..464921) 1 NC_008787.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 464921 hemH 4682394 hemH Campylobacter jejuni subsp. jejuni 81-176 ferrochelatase YP_001000206.1 463992 R 354242 CDS YP_001000207.1 121612124 4683532 complement(464918..465784) 1 NC_008787.1 identified by match to protein family HMM PF01408; Gfo/Idh/MocA family oxidoreductase 465784 4683532 CJJ81176_0532 Campylobacter jejuni subsp. jejuni 81-176 Gfo/Idh/MocA family oxidoreductase YP_001000207.1 464918 R 354242 CDS YP_001000208.1 121613019 4682463 complement(465789..466862) 1 NC_008787.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; DegT/DnrJ/EryC1/StrS aminotransferase family protein 466862 4682463 CJJ81176_0533 Campylobacter jejuni subsp. jejuni 81-176 DegT/DnrJ/EryC1/StrS aminotransferase family protein YP_001000208.1 465789 R 354242 CDS YP_001000209.1 121612666 4683267 466977..469505 1 NC_008787.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 469505 alaS 4683267 alaS Campylobacter jejuni subsp. jejuni 81-176 alanyl-tRNA synthetase YP_001000209.1 466977 D 354242 CDS YP_001000210.1 121613120 4683694 469505..470056 1 NC_008787.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 470056 4683694 CJJ81176_0535 Campylobacter jejuni subsp. jejuni 81-176 Maf-like protein YP_001000210.1 469505 D 354242 CDS YP_001000211.1 121612837 4683133 470053..471984 1 NC_008787.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1A 471984 pbpA 4683133 pbpA Campylobacter jejuni subsp. jejuni 81-176 penicillin-binding protein 1A YP_001000211.1 470053 D 354242 CDS YP_001000212.1 121613623 4683502 complement(472012..474585) 1 NC_008787.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; ATP-dependent chaperone protein ClpB 474585 clpB 4683502 clpB Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent chaperone protein ClpB YP_001000212.1 472012 R 354242 CDS YP_001000213.1 121612705 4683379 complement(474697..474987) 1 NC_008787.1 identified by match to protein family HMM PF02583; hypothetical protein 474987 4683379 CJJ81176_0538 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000213.1 474697 R 354242 CDS YP_001000214.1 121613476 4683664 475105..476439 1 NC_008787.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease 476439 ctpA 4683664 ctpA Campylobacter jejuni subsp. jejuni 81-176 carboxyl-terminal protease YP_001000214.1 475105 D 354242 CDS YP_001000215.1 121612696 4683410 476441..477151 1 NC_008787.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 477151 purC 4683410 purC Campylobacter jejuni subsp. jejuni 81-176 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001000215.1 476441 D 354242 CDS YP_001000216.1 121613644 4683661 477160..477405 1 NC_008787.1 identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302; phosphoribosylformylglycinamidine synthase, purS protein 477405 purS 4683661 purS Campylobacter jejuni subsp. jejuni 81-176 phosphoribosylformylglycinamidine synthase, purS protein YP_001000216.1 477160 D 354242 CDS YP_001000217.1 121612879 4682267 477407..478054 1 NC_008787.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 478054 purQ 4682267 purQ Campylobacter jejuni subsp. jejuni 81-176 phosphoribosylformylglycinamidine synthase I YP_001000217.1 477407 D 354242 CDS YP_001000218.1 121613028 4683447 478138..479247 1 NC_008787.1 hypothetical protein 479247 4683447 CJJ81176_0543 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000218.1 478138 D 354242 CDS YP_001000219.1 121612293 4683262 479228..479920 1 NC_008787.1 identified by match to protein family HMM PF01553; 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative 479920 4683262 CJJ81176_0544 Campylobacter jejuni subsp. jejuni 81-176 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative YP_001000219.1 479228 D 354242 CDS YP_001000220.1 121612809 4682437 479914..480282 1 NC_008787.1 identified by match to protein family HMM PF02537; match to protein family HMM TIGR00494; crcB protein 480282 4682437 CJJ81176_0545 Campylobacter jejuni subsp. jejuni 81-176 crcB protein YP_001000220.1 479914 D 354242 CDS YP_001000221.1 121612114 4683534 480354..482180 1 NC_008787.1 molecular chaperone; heat shock protein 90 482180 htpG 4683534 htpG Campylobacter jejuni subsp. jejuni 81-176 heat shock protein 90 YP_001000221.1 480354 D 354242 CDS YP_001000222.1 121613054 4682402 482177..482494 1 NC_008787.1 hypothetical protein 482494 4682402 CJJ81176_0547 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000222.1 482177 D 354242 CDS YP_001000223.1 121613503 4683238 482494..482928 1 NC_008787.1 hypothetical protein 482928 4683238 CJJ81176_0548 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000223.1 482494 D 354242 CDS YP_001000224.1 121612688 4682696 482932..484701 1 NC_008787.1 identified by match to protein family HMM PF02690; Na/Pi-cotransporter, putative 484701 4682696 CJJ81176_0549 Campylobacter jejuni subsp. jejuni 81-176 Na/Pi-cotransporter, putative YP_001000224.1 482932 D 354242 CDS YP_001000225.1 121613241 4683672 complement(484698..486506) 1 NC_008787.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 486506 4683672 CJJ81176_0550 Campylobacter jejuni subsp. jejuni 81-176 penicillin-binding protein YP_001000225.1 484698 R 354242 CDS YP_001000226.1 121613420 4682993 complement(486513..486809) 1 NC_008787.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 486809 fliE 4682993 fliE Campylobacter jejuni subsp. jejuni 81-176 flagellar hook-basal body protein FliE YP_001000226.1 486513 R 354242 CDS YP_001000227.1 121612733 4682789 complement(486816..487310) 1 NC_008787.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 487310 flgC 4682789 flgC Campylobacter jejuni subsp. jejuni 81-176 flagellar basal body rod protein FlgC YP_001000227.1 486816 R 354242 CDS YP_001000228.1 121613256 4683619 complement(487320..487751) 1 NC_008787.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 487751 flgB 4683619 flgB Campylobacter jejuni subsp. jejuni 81-176 flagellar basal body rod protein FlgB YP_001000228.1 487320 R 354242 CDS YP_001000229.1 121613311 4682986 complement(487831..488919) 1 NC_008787.1 identified by match to protein family HMM PF02618; hypothetical protein 488919 4682986 CJJ81176_0554 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000229.1 487831 R 354242 CDS YP_001000230.1 121612196 4682931 488786..491317 1 NC_008787.1 hypothetical protein 491317 4682931 CJJ81176_0555 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000230.1 488786 D 354242 CDS YP_001000231.1 121612541 4682637 491335..493638 1 NC_008787.1 identified by match to protein family HMM PF03971; match to protein family HMM TIGR00178; isocitrate dehydrogenase, NADP-dependent 493638 icd 4682637 icd Campylobacter jejuni subsp. jejuni 81-176 isocitrate dehydrogenase, NADP-dependent YP_001000231.1 491335 D 354242 CDS YP_001000232.1 121613659 4683126 493635..494537 1 NC_008787.1 identified by match to protein family HMM PF00056; match to protein family HMM PF02866; malate dehydrogenase 494537 mdh 4683126 mdh Campylobacter jejuni subsp. jejuni 81-176 malate dehydrogenase YP_001000232.1 493635 D 354242 CDS YP_001000233.1 121612371 4682667 494538..495701 1 NC_008787.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 495701 sucC 4682667 sucC Campylobacter jejuni subsp. jejuni 81-176 succinyl-CoA synthetase subunit beta YP_001000233.1 494538 D 354242 CDS YP_001000234.1 121613423 4682288 495711..496580 1 NC_008787.1 identified by match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019; succinyl-CoA synthase, alpha subunit 496580 sucD 4682288 sucD Campylobacter jejuni subsp. jejuni 81-176 succinyl-CoA synthase, alpha subunit YP_001000234.1 495711 D 354242 CDS YP_001000235.1 121612357 4682808 496594..496905 1 NC_008787.1 identified by match to protein family HMM PF00037; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 496905 oorD 4682808 oorD Campylobacter jejuni subsp. jejuni 81-176 2-oxoglutarate-acceptor oxidoreductase subunit OorD YP_001000235.1 496594 D 354242 CDS YP_001000236.1 121613267 4682318 496914..498038 1 NC_008787.1 identified by match to protein family HMM PF01855; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 498038 oorA 4682318 oorA Campylobacter jejuni subsp. jejuni 81-176 2-oxoglutarate-acceptor oxidoreductase subunit OorA YP_001000236.1 496914 D 354242 CDS YP_001000237.1 121612137 4683500 498040..498885 1 NC_008787.1 identified by match to protein family HMM PF02775; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 498885 oorB 4683500 oorB Campylobacter jejuni subsp. jejuni 81-176 2-oxoglutarate-acceptor oxidoreductase subunit OorB YP_001000237.1 498040 D 354242 CDS YP_001000238.1 121613037 4682505 498882..499439 1 NC_008787.1 identified by match to protein family HMM PF01558; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 499439 oorC 4682505 oorC Campylobacter jejuni subsp. jejuni 81-176 2-oxoglutarate-acceptor oxidoreductase subunit OorC YP_001000238.1 498882 D 354242 CDS YP_001000239.1 121613466 4683247 499578..499841 1 NC_008787.1 hypothetical protein 499841 4683247 CJJ81176_0564 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000239.1 499578 D 354242 CDS YP_001000240.1 121613454 4682914 499844..500380 1 NC_008787.1 hypothetical protein 500380 4682914 CJJ81176_0565 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000240.1 499844 D 354242 CDS YP_001000241.1 121612193 4682738 500394..501287 1 NC_008787.1 identified by match to protein family HMM PF00348; polyprenyl synthetase family protein 501287 4682738 CJJ81176_0566 Campylobacter jejuni subsp. jejuni 81-176 polyprenyl synthetase family protein YP_001000241.1 500394 D 354242 CDS YP_001000242.1 121612724 4682644 501287..502585 1 NC_008787.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 502585 hemA 4682644 hemA Campylobacter jejuni subsp. jejuni 81-176 glutamyl-tRNA reductase YP_001000242.1 501287 D 354242 CDS YP_001000243.1 121612398 4683643 502569..504278 1 NC_008787.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 504278 proS 4683643 proS Campylobacter jejuni subsp. jejuni 81-176 prolyl-tRNA synthetase YP_001000243.1 502569 D 354242 CDS YP_001000244.1 121613347 4682250 504275..504664 1 NC_008787.1 hypothetical protein 504664 4682250 CJJ81176_0569 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000244.1 504275 D 354242 CDS YP_001000245.1 121612975 4682881 504661..505584 1 NC_008787.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 505584 hemC 4682881 hemC Campylobacter jejuni subsp. jejuni 81-176 porphobilinogen deaminase YP_001000245.1 504661 D 354242 CDS YP_001000246.1 121612503 4683634 505581..507383 1 NC_008787.1 identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative 507383 4683634 CJJ81176_0571 Campylobacter jejuni subsp. jejuni 81-176 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative YP_001000246.1 505581 D 354242 CDS YP_001000247.1 121613608 4683530 507540..507905 1 NC_008787.1 possibly involved in flagella export; flagellar protein FlaG 507905 flaG 4683530 flaG Campylobacter jejuni subsp. jejuni 81-176 flagellar protein FlaG YP_001000247.1 507540 D 354242 CDS YP_001000248.1 121612277 4683762 507908..509836 1 NC_008787.1 Also called hook-associated protein 2; involved in flagellin assembly; flagellar capping protein 509836 fliD 4683762 fliD Campylobacter jejuni subsp. jejuni 81-176 flagellar capping protein YP_001000248.1 507908 D 354242 CDS YP_001000249.1 121612919 4682466 509848..510234 1 NC_008787.1 flagellin specific chaperone; flagellar protein FliS 510234 fliS 4682466 fliS Campylobacter jejuni subsp. jejuni 81-176 flagellar protein FliS YP_001000249.1 509848 D 354242 CDS YP_001000250.1 121613558 4683401 510299..510490 1 NC_008787.1 hypothetical protein 510490 4683401 CJJ81176_0575 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000250.1 510299 D 354242 CDS YP_001000251.1 121613609 4682138 510922..511491 1 NC_008787.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 511491 efp 4682138 efp Campylobacter jejuni subsp. jejuni 81-176 elongation factor P YP_001000251.1 510922 D 354242 CDS YP_001000252.1 121613395 4683763 511650..512342 1 NC_008787.1 identified by match to protein family HMM PF06149; hypothetical protein 512342 4683763 CJJ81176_0577 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000252.1 511650 D 354242 CDS YP_001000253.1 121612453 4682816 512329..513282 1 NC_008787.1 identified by match to protein family HMM PF06166; hypothetical protein 513282 4682816 CJJ81176_0578 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000253.1 512329 D 354242 CDS YP_001000254.1 121613151 4682172 513292..514296 1 NC_008787.1 hypothetical protein 514296 4682172 CJJ81176_0579 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000254.1 513292 D 354242 CDS YP_001000255.1 121613524 4683114 514411..515697 1 NC_008787.1 identified by match to protein family HMM PF03600; match to protein family HMM PF07158; hypothetical protein 515697 4683114 CJJ81176_0580 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000255.1 514411 D 354242 CDS YP_001000256.1 121613315 4683785 515708..516505 1 NC_008787.1 identified by match to protein family HMM PF04909; hypothetical protein 516505 4683785 CJJ81176_0581 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000256.1 515708 D 354242 CDS YP_001000257.1 121612381 4682913 complement(516502..517587) 1 NC_008787.1 hypothetical protein 517587 4682913 CJJ81176_0582 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000257.1 516502 R 354242 CDS YP_001000258.1 121612161 4682276 complement(517584..518816) 1 NC_008787.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 518816 proA 4682276 proA Campylobacter jejuni subsp. jejuni 81-176 gamma-glutamyl phosphate reductase YP_001000258.1 517584 R 354242 CDS YP_001000259.1 121612116 4682613 518887..519822 1 NC_008787.1 identified by match to protein family HMM PF00070; match to protein family HMM PF03486; match to protein family HMM PF07992; pyridine nucleotide-disulphide oxidoreductase family protein 519822 4682613 CJJ81176_0584 Campylobacter jejuni subsp. jejuni 81-176 pyridine nucleotide-disulphide oxidoreductase family protein YP_001000259.1 518887 D 354242 CDS YP_001000260.1 121612390 4682423 520003..521331 1 NC_008787.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein, authentic frameshift 521331 4682423 CJJ81176_0585 Campylobacter jejuni subsp. jejuni 81-176 MATE efflux family protein, authentic frameshift YP_001000260.1 520003 D 354242 CDS YP_001000261.1 121612587 4682256 complement(521379..522308) 1 NC_008787.1 hypothetical protein 522308 4682256 CJJ81176_0586 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000261.1 521379 R 354242 CDS YP_001000262.1 121613691 4682615 522462..523838 1 NC_008787.1 unwinds double stranded DNA; replicative DNA helicase 523838 dnaB 4682615 dnaB Campylobacter jejuni subsp. jejuni 81-176 replicative DNA helicase YP_001000262.1 522462 D 354242 CDS YP_001000263.1 121612607 4683419 523943..524503 1 NC_008787.1 hypothetical protein 524503 4683419 CJJ81176_0588 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000263.1 523943 D 354242 CDS YP_001000264.1 121613135 4682299 524494..524700 1 NC_008787.1 hypothetical protein 524700 4682299 CJJ81176_0589 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000264.1 524494 D 354242 CDS YP_001000265.1 121612361 4683128 524842..525519 1 NC_008787.1 hypothetical protein 525519 4683128 CJJ81176_0590 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000265.1 524842 D 354242 CDS YP_001000266.1 121612662 4682305 525591..526457 1 NC_008787.1 hypothetical protein 526457 4682305 CJJ81176_0591 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000266.1 525591 D 354242 CDS YP_001000267.1 121613417 4683704 526457..527239 1 NC_008787.1 hypothetical protein 527239 4683704 CJJ81176_0592 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000267.1 526457 D 354242 CDS YP_001000268.1 121612906 4682780 527243..527707 1 NC_008787.1 hypothetical protein 527707 4682780 CJJ81176_0593 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000268.1 527243 D 354242 CDS YP_001000269.1 121613637 4683416 527714..528019 1 NC_008787.1 hypothetical protein 528019 4683416 CJJ81176_0594 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000269.1 527714 D 354242 CDS YP_001000270.1 121612992 4683579 528028..528237 1 NC_008787.1 putative ATP 528237 4683579 CJJ81176_0595 Campylobacter jejuni subsp. jejuni 81-176 putative ATP YP_001000270.1 528028 D 354242 CDS YP_001000271.1 121612495 4683296 528194..529096 1 NC_008787.1 hypothetical protein 529096 4683296 CJJ81176_0596 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000271.1 528194 D 354242 CDS YP_001000272.1 121612994 4683615 529241..529963 1 NC_008787.1 transcriptional regulator, putative 529963 4683615 CJJ81176_0597 Campylobacter jejuni subsp. jejuni 81-176 transcriptional regulator, putative YP_001000272.1 529241 D 354242 CDS YP_001000273.1 121612493 4682382 530214..531281 1 NC_008787.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 531281 ribB 4682382 ribB Campylobacter jejuni subsp. jejuni 81-176 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_001000273.1 530214 D 354242 CDS YP_001000274.1 121613236 4683675 531293..531736 1 NC_008787.1 identified by match to protein family HMM PF02637; GatB/Yqey family protein 531736 4683675 CJJ81176_0601 Campylobacter jejuni subsp. jejuni 81-176 GatB/Yqey family protein YP_001000274.1 531293 D 354242 CDS YP_001000275.1 121612686 4683032 531754..533454 1 NC_008787.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine resistant; also known as acetolactate synthase 3 large subunit; acetolactate synthase 3 catalytic subunit 533454 ilvB 4683032 ilvB Campylobacter jejuni subsp. jejuni 81-176 acetolactate synthase 3 catalytic subunit YP_001000275.1 531754 D 354242 CDS YP_001000276.1 121613459 4683684 533451..533915 1 NC_008787.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 533915 ilvH 4683684 ilvH Campylobacter jejuni subsp. jejuni 81-176 acetolactate synthase 3 regulatory subunit YP_001000276.1 533451 D 354242 CDS YP_001000277.1 121612208 4682735 533912..534877 1 NC_008787.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 534877 lpxD 4682735 lpxD Campylobacter jejuni subsp. jejuni 81-176 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001000277.1 533912 D 354242 CDS YP_001000278.1 121612914 4682607 complement(534866..535894) 1 NC_008787.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 535894 queA 4682607 queA Campylobacter jejuni subsp. jejuni 81-176 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_001000278.1 534866 R 354242 CDS YP_001000279.1 121612929 4683509 complement(535887..536624) 1 NC_008787.1 identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; Sec-independent protein translocase TatC 536624 tatC 4683509 tatC Campylobacter jejuni subsp. jejuni 81-176 Sec-independent protein translocase TatC YP_001000279.1 535887 R 354242 CDS YP_001000280.1 121613026 4683387 complement(536625..537032) 1 NC_008787.1 mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 537032 tatB 4683387 tatB Campylobacter jejuni subsp. jejuni 81-176 sec-independent translocase YP_001000280.1 536625 R 354242 CDS YP_001000281.1 121613561 4683258 complement(537091..538158) 1 NC_008787.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 538158 4683258 CJJ81176_0608 Campylobacter jejuni subsp. jejuni 81-176 coproporphyrinogen III oxidase YP_001000281.1 537091 R 354242 CDS YP_001000282.1 121612395 4682523 538259..538729 1 NC_008787.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 538729 nidH 4682523 nidH Campylobacter jejuni subsp. jejuni 81-176 dinucleoside polyphosphate hydrolase YP_001000282.1 538259 D 354242 CDS YP_001000283.1 121612667 4682249 538731..539933 1 NC_008787.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 539933 4682249 CJJ81176_0610 Campylobacter jejuni subsp. jejuni 81-176 aspartate kinase YP_001000283.1 538731 D 354242 CDS YP_001000284.1 121612179 4683695 539934..540470 1 NC_008787.1 hypothetical protein 540470 4683695 CJJ81176_0611 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000284.1 539934 D 354242 CDS YP_001000285.1 121613355 4682684 540476..541075 1 NC_008787.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 541075 4682684 CJJ81176_0612 Campylobacter jejuni subsp. jejuni 81-176 DNA polymerase III subunit delta' YP_001000285.1 540476 D 354242 CDS YP_001000286.1 121613043 4682877 541077..542219 1 NC_008787.1 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 542219 folP 4682877 folP Campylobacter jejuni subsp. jejuni 81-176 dihydropteroate synthase YP_001000286.1 541077 D 354242 CDS YP_001000287.1 121612203 4683233 542220..544163 1 NC_008787.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 544163 ligA 4683233 ligA Campylobacter jejuni subsp. jejuni 81-176 NAD-dependent DNA ligase LigA YP_001000287.1 542220 D 354242 CDS YP_001000288.1 121613689 4682630 544201..545148 1 NC_008787.1 hypothetical protein 545148 4682630 CJJ81176_0615 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000288.1 544201 D 354242 CDS YP_001000289.1 121612817 4682406 545145..545906 1 NC_008787.1 identified by match to protein family HMM PF01479; match to protein family HMM PF01728; hemolysin A 545906 tlyA 4682406 tlyA Campylobacter jejuni subsp. jejuni 81-176 hemolysin A YP_001000289.1 545145 D 354242 CDS YP_001000290.1 121613196 4683522 545872..546726 1 NC_008787.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 546726 4683522 CJJ81176_0617 Campylobacter jejuni subsp. jejuni 81-176 bifunctional riboflavin kinase/FMN adenylyltransferase YP_001000290.1 545872 D 354242 CDS YP_001000291.1 121613142 4683063 546716..547423 1 NC_008787.1 identified by match to protein family HMM TIGR00740; methyltransferase, putative 547423 4683063 CJJ81176_0618 Campylobacter jejuni subsp. jejuni 81-176 methyltransferase, putative YP_001000291.1 546716 D 354242 CDS YP_001000292.1 121612436 4683117 complement(547413..547628) 1 NC_008787.1 putative lipoprotein 547628 4683117 CJJ81176_0619 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000292.1 547413 R 354242 CDS YP_001000293.1 121612412 4682194 complement(547625..548065) 1 NC_008787.1 hypothetical protein 548065 4682194 CJJ81176_0620 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000293.1 547625 R 354242 CDS YP_001000294.1 121612943 4682233 complement(548123..548755) 1 NC_008787.1 identified by match to protein family HMM PF03458; hypothetical protein 548755 4682233 CJJ81176_0621 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000294.1 548123 R 354242 CDS YP_001000295.1 121612258 4683780 complement(548766..549416) 1 NC_008787.1 identified by match to protein family HMM PF01223; DNA/RNA non-specific endonuclease 549416 4683780 CJJ81176_0622 Campylobacter jejuni subsp. jejuni 81-176 DNA/RNA non-specific endonuclease YP_001000295.1 548766 R 354242 CDS YP_001000296.1 121613661 4682112 complement(549413..550039) 1 NC_008787.1 identified by match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 550039 nth 4682112 nth Campylobacter jejuni subsp. jejuni 81-176 endonuclease III YP_001000296.1 549413 R 354242 CDS YP_001000297.1 121612905 4682557 550120..550941 1 NC_008787.1 identified by match to protein family HMM PF00639; major antigenic peptide PEB4 550941 4682557 CJJ81176_0624 Campylobacter jejuni subsp. jejuni 81-176 major antigenic peptide PEB4 YP_001000297.1 550120 D 354242 CDS YP_001000298.1 121613445 4683407 550941..552005 1 NC_008787.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 552005 fbaA 4683407 fbaA Campylobacter jejuni subsp. jejuni 81-176 fructose-bisphosphate aldolase YP_001000298.1 550941 D 354242 CDS YP_001000299.1 121612532 4682753 552100..553542 1 NC_008787.1 hypothetical protein 553542 4682753 CJJ81176_0626 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000299.1 552100 D 354242 CDS YP_001000300.1 121613602 4683212 553539..554492 1 NC_008787.1 identified by match to protein family HMM PF00691; chemotaxis protein MotB, putative 554492 4683212 CJJ81176_0627 Campylobacter jejuni subsp. jejuni 81-176 chemotaxis protein MotB, putative YP_001000300.1 553539 D 354242 CDS YP_001000301.1 121613124 4683772 554479..555354 1 NC_008787.1 hypothetical protein 555354 4683772 CJJ81176_0628 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000301.1 554479 D 354242 CDS YP_001000302.1 121612598 4683149 complement(555346..556689) 1 NC_008787.1 identified by match to protein family HMM PF00209; sodium-dependent transporter, putative 556689 4683149 CJJ81176_0629 Campylobacter jejuni subsp. jejuni 81-176 sodium-dependent transporter, putative YP_001000302.1 555346 R 354242 CDS YP_001000303.1 121612109 4682387 complement(556740..557408) 1 NC_008787.1 identified by match to protein family HMM PF03473; match to protein family HMM PF03475; MOSC domain-containing protein 557408 4682387 CJJ81176_0630 Campylobacter jejuni subsp. jejuni 81-176 MOSC domain-containing protein YP_001000303.1 556740 R 354242 CDS YP_001000304.1 121613317 4682399 complement(557405..559108) 1 NC_008787.1 identified by match to protein family HMM PF00085; match to protein family HMM PF02683; thiol:disulfide interchange protein DsbD 559108 dsbD 4682399 dsbD Campylobacter jejuni subsp. jejuni 81-176 thiol:disulfide interchange protein DsbD YP_001000304.1 557405 R 354242 CDS YP_001000305.1 121612417 4682925 559203..559691 1 NC_008787.1 identified by match to protein family HMM PF03976; hypothetical protein 559691 4682925 CJJ81176_0632 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000305.1 559203 D 354242 CDS YP_001000306.1 121612632 4682209 559672..560085 1 NC_008787.1 identified by match to protein family HMM PF03976; polyphosphate kinase 2 560085 4682209 CJJ81176_0633 Campylobacter jejuni subsp. jejuni 81-176 polyphosphate kinase 2 YP_001000306.1 559672 D 354242 CDS YP_001000307.1 121613567 4683742 560094..561284 1 NC_008787.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; carboxypeptidase 561284 4683742 CJJ81176_0634 Campylobacter jejuni subsp. jejuni 81-176 carboxypeptidase YP_001000307.1 560094 D 354242 CDS YP_001000308.1 121612494 4682833 561363..562535 1 NC_008787.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; macrolide-specific efflux protein macA 562535 4682833 CJJ81176_0635 Campylobacter jejuni subsp. jejuni 81-176 macrolide-specific efflux protein macA YP_001000308.1 561363 D 354242 CDS YP_001000309.1 121613435 4683614 562535..564460 1 NC_008787.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02687; macrolide-specific efflux protein macB 564460 4683614 CJJ81176_0636 Campylobacter jejuni subsp. jejuni 81-176 macrolide-specific efflux protein macB YP_001000309.1 562535 D 354242 CDS YP_001000310.1 121612200 4682755 564462..565832 1 NC_008787.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 565832 4682755 CJJ81176_0637 Campylobacter jejuni subsp. jejuni 81-176 outer membrane efflux protein YP_001000310.1 564462 D 354242 CDS YP_001000311.1 121613122 4682625 complement(565834..567012) 1 NC_008787.1 hypothetical protein 567012 4682625 CJJ81176_0638 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000311.1 565834 R 354242 CDS YP_001000312.1 121612115 4683141 complement(566999..568009) 1 NC_008787.1 identified by match to protein family HMM PF04311; hypothetical protein 568009 4683141 CJJ81176_0639 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000312.1 566999 R 354242 CDS YP_001000313.1 121613091 4682422 complement(568010..569386) 1 NC_008787.1 identified by match to protein family HMM PF03062; alginate O-acetyltransferase AlgI 569386 algI 4682422 algI Campylobacter jejuni subsp. jejuni 81-176 alginate O-acetyltransferase AlgI YP_001000313.1 568010 R 354242 CDS YP_001000314.1 121612745 4683176 complement(569429..569932) 1 NC_008787.1 identified by match to protein family HMM PF00210; nonheme iron-containing ferritin 569932 ftn 4683176 ftn Campylobacter jejuni subsp. jejuni 81-176 nonheme iron-containing ferritin YP_001000314.1 569429 R 354242 CDS YP_001000315.1 121613740 4683609 570112..571107 1 NC_008787.1 phosphate ABC transporter, periplasmic phosphate-binding protein, putative 571107 4683609 CJJ81176_0642 Campylobacter jejuni subsp. jejuni 81-176 phosphate ABC transporter, periplasmic phosphate-binding protein, putative YP_001000315.1 570112 D 354242 CDS YP_001000316.1 121612553 4683560 571117..572031 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter, permease protein PstC, putative 572031 4683560 CJJ81176_0643 Campylobacter jejuni subsp. jejuni 81-176 phosphate ABC transporter, permease protein PstC, putative YP_001000316.1 571117 D 354242 CDS YP_001000317.1 121612431 4682995 572028..573116 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter, permease protein PstA, putative 573116 4682995 CJJ81176_0644 Campylobacter jejuni subsp. jejuni 81-176 phosphate ABC transporter, permease protein PstA, putative YP_001000317.1 572028 D 354242 CDS YP_001000318.1 121613221 4682201 573113..573853 1 NC_008787.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 573853 pstB 4682201 pstB Campylobacter jejuni subsp. jejuni 81-176 phosphate ABC transporter ATP-binding protein YP_001000318.1 573113 D 354242 CDS YP_001000319.1 121612284 4683031 573915..574526 1 NC_008787.1 hypothetical protein 574526 4683031 CJJ81176_0646 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000319.1 573915 D 354242 CDS YP_001000320.1 121612761 4682451 574496..575143 1 NC_008787.1 hypothetical protein 575143 4682451 CJJ81176_0647 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000320.1 574496 D 354242 CDS YP_001000321.1 121613102 4683591 575233..576549 1 NC_008787.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 576549 4683591 CJJ81176_0648 Campylobacter jejuni subsp. jejuni 81-176 MATE efflux family protein YP_001000321.1 575233 D 354242 CDS YP_001000322.1 121613092 4683314 576525..577172 1 NC_008787.1 identified by match to protein family HMM PF01863; hypothetical protein 577172 4683314 CJJ81176_0649 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000322.1 576525 D 354242 CDS YP_001000323.1 121612177 4683179 577214..578734 1 NC_008787.1 hypothetical protein 578734 4683179 CJJ81176_0650 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000323.1 577214 D 354242 CDS YP_001000324.1 121613174 4682680 578715..580901 1 NC_008787.1 identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF 580901 hypF 4682680 hypF Campylobacter jejuni subsp. jejuni 81-176 [NiFe] hydrogenase maturation protein HypF YP_001000324.1 578715 D 354242 CDS YP_001000325.1 121613480 4683071 580974..581717 1 NC_008787.1 identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase accessory protein HypB 581717 hypB 4683071 hypB Campylobacter jejuni subsp. jejuni 81-176 hydrogenase accessory protein HypB YP_001000325.1 580974 D 354242 CDS YP_001000326.1 121613492 4682728 581717..581998 1 NC_008787.1 identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC/HupF 581998 hypC 4682728 hypC Campylobacter jejuni subsp. jejuni 81-176 hydrogenase assembly chaperone HypC/HupF YP_001000326.1 581717 D 354242 CDS YP_001000327.1 121612566 4682714 581982..583073 1 NC_008787.1 identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075; hydrogenase expression/formation protein HypD 583073 hypD 4682714 hypD Campylobacter jejuni subsp. jejuni 81-176 hydrogenase expression/formation protein HypD YP_001000327.1 581982 D 354242 CDS YP_001000328.1 121613323 4682799 583070..584044 1 NC_008787.1 identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE 584044 hypE 4682799 hypE Campylobacter jejuni subsp. jejuni 81-176 hydrogenase expression/formation protein HypE YP_001000328.1 583070 D 354242 CDS YP_001000329.1 121612187 4682907 584044..584388 1 NC_008787.1 identified by match to protein family HMM PF01155; match to protein family HMM TIGR00100; hydrogenase nickel insertion protein HypA 584388 hypA 4682907 hypA Campylobacter jejuni subsp. jejuni 81-176 hydrogenase nickel insertion protein HypA YP_001000329.1 584044 D 354242 CDS YP_001000330.1 121613707 4682660 complement(584630..585367) 1 NC_008787.1 identified by match to protein family HMM PF04313; prophage Lp2 protein 6 585367 4682660 CJJ81176_0657 Campylobacter jejuni subsp. jejuni 81-176 prophage Lp2 protein 6 YP_001000330.1 584630 R 354242 CDS YP_001000331.1 121612153 4682219 complement(585430..586398) 1 NC_008787.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 586398 4682219 CJJ81176_0658 Campylobacter jejuni subsp. jejuni 81-176 DNA polymerase III subunit delta YP_001000331.1 585430 R 354242 CDS YP_001000332.1 121612615 4682591 complement(586391..588325) 1 NC_008787.1 identified by match to protein family HMM PF00773; match to protein family HMM PF08206; RNB-like protein 588325 4682591 CJJ81176_0659 Campylobacter jejuni subsp. jejuni 81-176 RNB-like protein YP_001000332.1 586391 R 354242 CDS YP_001000333.1 121613543 4682227 588444..589466 1 NC_008787.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 589466 ilvC 4682227 ilvC Campylobacter jejuni subsp. jejuni 81-176 ketol-acid reductoisomerase YP_001000333.1 588444 D 354242 CDS YP_001000334.1 121613073 4682107 589470..590552 1 NC_008787.1 identified by match to protein family HMM PF04748; hypothetical protein 590552 4682107 CJJ81176_0661 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000334.1 589470 D 354242 CDS YP_001000335.1 121612378 4683205 590542..591315 1 NC_008787.1 identified by match to protein family HMM PF02481; DNA processing protein A 591315 dprA 4683205 dprA Campylobacter jejuni subsp. jejuni 81-176 DNA processing protein A YP_001000335.1 590542 D 354242 CDS YP_001000336.1 121612111 4682279 591312..591695 1 NC_008787.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 591695 4682279 CJJ81176_0663 Campylobacter jejuni subsp. jejuni 81-176 Holliday junction resolvase-like protein YP_001000336.1 591312 D 354242 CDS YP_001000337.1 121613038 4682397 591724..592563 1 NC_008787.1 identified by match to protein family HMM PF01189; NOL1/NOP2/sun family protein 592563 4682397 CJJ81176_0664 Campylobacter jejuni subsp. jejuni 81-176 NOL1/NOP2/sun family protein YP_001000337.1 591724 D 354242 CDS YP_001000338.1 121612764 4683242 complement(592739..593236) 1 NC_008787.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 593236 msrA 4683242 msrA Campylobacter jejuni subsp. jejuni 81-176 methionine sulfoxide reductase A YP_001000338.1 592739 R 354242 CDS YP_001000339.1 121613702 4683594 complement(593277..593795) 1 NC_008787.1 identified by match to protein family HMM PF00719; inorganic pyrophosphatase 593795 ppa 4683594 ppa Campylobacter jejuni subsp. jejuni 81-176 inorganic pyrophosphatase YP_001000339.1 593277 R 354242 CDS YP_001000340.1 121613132 4682292 complement(593805..594383) 1 NC_008787.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 594383 adk 4682292 adk Campylobacter jejuni subsp. jejuni 81-176 adenylate kinase YP_001000340.1 593805 R 354242 CDS YP_001000341.1 121612173 4683139 complement(594380..596131) 1 NC_008787.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 596131 aspS 4683139 aspS Campylobacter jejuni subsp. jejuni 81-176 aspartyl-tRNA synthetase YP_001000341.1 594380 R 354242 CDS YP_001000342.1 121613722 4682669 596222..597082 1 NC_008787.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 597082 pnk 4682669 pnk Campylobacter jejuni subsp. jejuni 81-176 inorganic polyphosphate/ATP-NAD kinase YP_001000342.1 596222 D 354242 CDS YP_001000343.1 121613072 4682167 597082..598605 1 NC_008787.1 identified by match to protein family HMM PF02463; DNA repair protein RecN 598605 recN 4682167 recN Campylobacter jejuni subsp. jejuni 81-176 DNA repair protein RecN YP_001000343.1 597082 D 354242 CDS YP_001000344.1 121613539 4683204 598708..599952 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254; response regulator/GGDEF domain-containing protein 599952 4683204 CJJ81176_0671 Campylobacter jejuni subsp. jejuni 81-176 response regulator/GGDEF domain-containing protein YP_001000344.1 598708 D 354242 CDS YP_001000345.1 121612578 4682371 599943..600758 1 NC_008787.1 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 600758 4682371 CJJ81176_0672 Campylobacter jejuni subsp. jejuni 81-176 TatD family hydrolase YP_001000345.1 599943 D 354242 CDS YP_001000346.1 121612334 4682722 600758..601876 1 NC_008787.1 identified by match to protein family HMM PF01464; match to protein family HMM PF01476; membrane-bound lytic murein transglycosylase D, putative 601876 4682722 CJJ81176_0673 Campylobacter jejuni subsp. jejuni 81-176 membrane-bound lytic murein transglycosylase D, putative YP_001000346.1 600758 D 354242 CDS YP_001000347.1 121613481 4682353 601863..602663 1 NC_008787.1 identified by match to protein family HMM PF03330; match to protein family HMM PF05036; match to protein family HMM TIGR00413; rare lipoprotein A 602663 rlpA 4682353 rlpA Campylobacter jejuni subsp. jejuni 81-176 rare lipoprotein A YP_001000347.1 601863 D 354242 CDS YP_001000348.1 121612209 4682729 602669..603157 1 NC_008787.1 identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; YrbI family phosphatase 603157 4682729 CJJ81176_0675 Campylobacter jejuni subsp. jejuni 81-176 YrbI family phosphatase YP_001000348.1 602669 D 354242 CDS YP_001000349.1 121613289 4682608 603211..603663 1 NC_008787.1 identified by match to protein family HMM PF06835; hypothetical protein 603663 4682608 CJJ81176_0676 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000349.1 603211 D 354242 CDS YP_001000350.1 121613362 4682951 603645..604106 1 NC_008787.1 identified by match to protein family HMM PF03968; OstA family protein 604106 4682951 CJJ81176_0677 Campylobacter jejuni subsp. jejuni 81-176 OstA family protein YP_001000350.1 603645 D 354242 CDS YP_001000351.1 121612815 4682864 604103..604699 1 NC_008787.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 604699 engB 4682864 engB Campylobacter jejuni subsp. jejuni 81-176 ribosome biogenesis GTP-binding protein YsxC YP_001000351.1 604103 D 354242 CDS YP_001000352.1 121612792 4683526 604696..605190 1 NC_008787.1 hypothetical protein 605190 4683526 CJJ81176_0679 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000352.1 604696 D 354242 CDS YP_001000353.1 121613597 4683546 605191..606996 1 NC_008787.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 2 606996 pbpC 4683546 pbpC Campylobacter jejuni subsp. jejuni 81-176 penicillin-binding protein 2 YP_001000353.1 605191 D 354242 CDS YP_001000354.1 121613066 4683369 complement(607117..608907) 1 NC_008787.1 identified by match to protein family HMM PF00557; M24 family peptidase 608907 4683369 CJJ81176_0681 Campylobacter jejuni subsp. jejuni 81-176 M24 family peptidase YP_001000354.1 607117 R 354242 CDS YP_001000355.1 121612118 4683210 complement(608923..610005) 1 NC_008787.1 identified by match to protein family HMM PF00854; di-/tripeptide transporter 610005 4683210 CJJ81176_0682 Campylobacter jejuni subsp. jejuni 81-176 di-/tripeptide transporter YP_001000355.1 608923 R 354242 CDS YP_001000356.1 121612101 4682426 complement(609978..610475) 1 NC_008787.1 di-/tripeptide transporter 610475 4682426 CJJ81176_0683 Campylobacter jejuni subsp. jejuni 81-176 di-/tripeptide transporter YP_001000356.1 609978 R 354242 CDS YP_001000357.1 121613291 4682360 complement(610646..610891) 1 NC_008787.1 di-/tripeptide transporter 610891 4682360 CJJ81176_0684 Campylobacter jejuni subsp. jejuni 81-176 di-/tripeptide transporter YP_001000357.1 610646 R 354242 CDS YP_001000358.1 121612355 4682953 complement(611119..612174) 1 NC_008787.1 di-/tripeptide transporter 612174 4682953 CJJ81176_0685 Campylobacter jejuni subsp. jejuni 81-176 di-/tripeptide transporter YP_001000358.1 611119 R 354242 CDS YP_001000359.1 121613529 4682320 complement(612301..612849) 1 NC_008787.1 hypothetical protein 612849 4682320 CJJ81176_0686 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000359.1 612301 R 354242 CDS YP_001000360.1 121612452 4682099 complement(612842..613897) 1 NC_008787.1 hypothetical protein 613897 4682099 CJJ81176_0687 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000360.1 612842 R 354242 CDS YP_001000361.1 121613147 4682171 complement(613935..614810) 1 NC_008787.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 614810 era 4682171 era Campylobacter jejuni subsp. jejuni 81-176 GTP-binding protein Era YP_001000361.1 613935 R 354242 CDS YP_001000362.1 121612676 4683122 complement(614807..616126) 1 NC_008787.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 616126 hslU 4683122 hslU Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent protease ATP-binding subunit HslU YP_001000362.1 614807 R 354242 CDS YP_001000363.1 121613396 4683698 complement(616123..616665) 1 NC_008787.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 616665 hslV 4683698 hslV Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent protease peptidase subunit YP_001000363.1 616123 R 354242 CDS YP_001000364.1 121612433 4682826 complement(616665..617108) 1 NC_008787.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 617108 rplI 4682826 rplI Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L9 YP_001000364.1 616665 R 354242 CDS YP_001000365.1 121613552 4682191 complement(617121..618341) 1 NC_008787.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 618341 argG 4682191 argG Campylobacter jejuni subsp. jejuni 81-176 argininosuccinate synthase YP_001000365.1 617121 R 354242 CDS YP_001000366.1 121612606 4682131 618496..618741 1 NC_008787.1 identified by match to protein family HMM PF01479; S4 domain-containing protein 618741 4682131 CJJ81176_0693 Campylobacter jejuni subsp. jejuni 81-176 S4 domain-containing protein YP_001000366.1 618496 D 354242 CDS YP_001000367.1 121613712 4682298 618738..619145 1 NC_008787.1 identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 619145 4682298 CJJ81176_0694 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000367.1 618738 D 354242 CDS YP_001000368.1 121612754 4682785 619129..619866 1 NC_008787.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 619866 4682785 CJJ81176_0695 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein YP_001000368.1 619129 D 354242 CDS YP_001000369.1 121612228 4683602 619866..621116 1 NC_008787.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 621116 rpoN 4683602 rpoN Campylobacter jejuni subsp. jejuni 81-176 RNA polymerase factor sigma-54 YP_001000369.1 619866 D 354242 CDS YP_001000370.1 121612823 4682583 621280..622704 1 NC_008787.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 622704 dcuB 4682583 dcuB Campylobacter jejuni subsp. jejuni 81-176 anaerobic C4-dicarboxylate transporter YP_001000370.1 621280 D 354242 CDS YP_001000371.1 121612366 4683512 622846..622959 1 NC_008787.1 hypothetical protein 622959 4683512 CJJ81176_0698 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000371.1 622846 D 354242 CDS YP_001000372.1 121613301 4682294 623043..624734 1 NC_008787.1 identified by match to protein family HMM PF03814; match to protein family HMM TIGR00680; potassium-transporting ATPase, A subunit, degenerate 624734 4682294 CJJ81176_0699 Campylobacter jejuni subsp. jejuni 81-176 potassium-transporting ATPase, A subunit, degenerate YP_001000372.1 623043 D 354242 CDS YP_001000373.1 121612835 4682933 624744..626789 1 NC_008787.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 626789 4682933 CJJ81176_0700 Campylobacter jejuni subsp. jejuni 81-176 potassium-transporting ATPase subunit B YP_001000373.1 624744 D 354242 CDS YP_001000374.1 121613457 4683498 626791..627399 1 NC_008787.1 identified by match to protein family HMM PF02669; potassium-transporting ATPase, C subunit, putative 627399 4683498 CJJ81176_0701 Campylobacter jejuni subsp. jejuni 81-176 potassium-transporting ATPase, C subunit, putative YP_001000374.1 626791 D 354242 CDS YP_001000375.1 121613633 4682733 627402..629330 1 NC_008787.1 identified by match to protein family HMM PF02702; truncated KdpD protein 629330 4682733 CJJ81176_0702 Campylobacter jejuni subsp. jejuni 81-176 truncated KdpD protein YP_001000375.1 627402 D 354242 CDS YP_001000376.1 121612747 4683514 complement(629325..631298) 1 NC_008787.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 631298 uvrB 4683514 uvrB Campylobacter jejuni subsp. jejuni 81-176 excinuclease ABC subunit B YP_001000376.1 629325 R 354242 CDS YP_001000377.1 121612166 4683611 631452..631682 1 NC_008787.1 hypothetical protein 631682 4683611 CJJ81176_0704 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000377.1 631452 D 354242 CDS YP_001000378.1 121613105 4682657 631672..631914 1 NC_008787.1 hypothetical protein 631914 4682657 CJJ81176_0705 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000378.1 631672 D 354242 CDS YP_001000379.1 121612365 4683166 631911..632348 1 NC_008787.1 hypothetical protein 632348 4683166 CJJ81176_0706 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000379.1 631911 D 354242 CDS YP_001000380.1 121613171 4682301 632330..634183 1 NC_008787.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 634183 priA 4682301 priA Campylobacter jejuni subsp. jejuni 81-176 primosome assembly protein PriA YP_001000380.1 632330 D 354242 CDS YP_001000381.1 121612281 4683080 complement(634193..635587) 1 NC_008787.1 invasion phenotype protein 635587 4683080 CJJ81176_0708 Campylobacter jejuni subsp. jejuni 81-176 invasion phenotype protein YP_001000381.1 634193 R 354242 CDS YP_001000382.1 121612967 4682458 635733..636806 1 NC_008787.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 636806 ispG 4682458 ispG Campylobacter jejuni subsp. jejuni 81-176 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001000382.1 635733 D 354242 CDS YP_001000383.1 121612803 4683341 complement(636836..637534) 1 NC_008787.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 637534 flgH 4683341 flgH Campylobacter jejuni subsp. jejuni 81-176 flagellar basal body L-ring protein YP_001000383.1 636836 R 354242 CDS YP_001000384.1 121613717 4683539 637594..639129 1 NC_008787.1 identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651; phosphate acetyltransferase 639129 pta 4683539 pta Campylobacter jejuni subsp. jejuni 81-176 phosphate acetyltransferase YP_001000384.1 637594 D 354242 CDS YP_001000385.1 121612307 4682442 639143..640333 1 NC_008787.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 640333 ackA 4682442 ackA Campylobacter jejuni subsp. jejuni 81-176 acetate kinase YP_001000385.1 639143 D 354242 CDS YP_001000386.1 121612979 4682404 complement(640361..644113) 1 NC_008787.1 identified by match to protein family HMM PF04313; hypothetical protein 644113 4682404 CJJ81176_0713 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000386.1 640361 R 354242 CDS YP_001000387.1 121613261 4683317 644263..644754 1 NC_008787.1 hypothetical protein 644754 4683317 CJJ81176_0714 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000387.1 644263 D 354242 CDS YP_001000388.1 121612518 4682991 complement(644742..645680) 1 NC_008787.1 hypothetical protein 645680 4682991 CJJ81176_0715 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000388.1 644742 R 354242 CDS YP_001000389.1 121613568 4683346 complement(645680..646612) 1 NC_008787.1 identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 646612 mraW 4683346 mraW Campylobacter jejuni subsp. jejuni 81-176 S-adenosyl-methyltransferase MraW YP_001000389.1 645680 R 354242 CDS YP_001000390.1 121613493 4683200 646777..648267 1 NC_008787.1 peptidyl-prolyl cis-trans isomerase D,-like protein 648267 4683200 CJJ81176_0717 Campylobacter jejuni subsp. jejuni 81-176 peptidyl-prolyl cis-trans isomerase D,-like protein YP_001000390.1 646777 D 354242 CDS YP_001000391.1 121612536 4682715 648270..649652 1 NC_008787.1 identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 649652 ftsA 4682715 ftsA Campylobacter jejuni subsp. jejuni 81-176 cell division protein FtsA YP_001000391.1 648270 D 354242 CDS YP_001000392.1 121613619 4683173 649668..650780 1 NC_008787.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 650780 ftsZ 4683173 ftsZ Campylobacter jejuni subsp. jejuni 81-176 cell division protein FtsZ YP_001000392.1 649668 D 354242 CDS YP_001000393.1 121612923 4683767 650936..651748 1 NC_008787.1 identified by match to protein family HMM PF00460; match to protein family HMM PF06429; flagellar basal-body rod protein 651748 4683767 CJJ81176_0720 Campylobacter jejuni subsp. jejuni 81-176 flagellar basal-body rod protein YP_001000393.1 650936 D 354242 CDS YP_001000394.1 121613571 4683393 651777..652568 1 NC_008787.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 652568 flgG 4683393 flgG Campylobacter jejuni subsp. jejuni 81-176 flagellar basal body rod protein FlgG YP_001000394.1 651777 D 354242 CDS YP_001000395.1 121612317 4682529 complement(652635..654065) 1 NC_008787.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 654065 glnA 4682529 glnA Campylobacter jejuni subsp. jejuni 81-176 glutamine synthetase, type I YP_001000395.1 652635 R 354242 CDS YP_001000396.1 121613498 4682384 654268..654963 1 NC_008787.1 hypothetical protein 654963 4682384 CJJ81176_0723 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000396.1 654268 D 354242 CDS YP_001000397.1 121613198 4682703 654960..656213 1 NC_008787.1 identified by match to protein family HMM PF01136; U32 family peptidase 656213 4682703 CJJ81176_0724 Campylobacter jejuni subsp. jejuni 81-176 U32 family peptidase YP_001000397.1 654960 D 354242 CDS YP_001000398.1 121612475 4683044 656214..656708 1 NC_008787.1 identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 656708 purE 4683044 purE Campylobacter jejuni subsp. jejuni 81-176 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001000398.1 656214 D 354242 CDS YP_001000399.1 121613096 4682081 656718..657254 1 NC_008787.1 hypothetical protein 657254 4682081 CJJ81176_0726 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000399.1 656718 D 354242 CDS YP_001000400.1 121613687 4683169 657266..658129 1 NC_008787.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 658129 glyQ 4683169 glyQ Campylobacter jejuni subsp. jejuni 81-176 glycyl-tRNA synthetase subunit alpha YP_001000400.1 657266 D 354242 CDS YP_001000401.1 121613154 4682217 658116..658841 1 NC_008787.1 identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein 658841 4682217 CJJ81176_0728 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000401.1 658116 D 354242 CDS YP_001000402.1 121613455 4683109 658851..659567 1 NC_008787.1 identified by match to protein family HMM PF02591; hypothetical protein 659567 4683109 CJJ81176_0729 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000402.1 658851 D 354242 CDS YP_001000403.1 121613279 4682739 659564..660721 1 NC_008787.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 660721 waaA 4682739 waaA Campylobacter jejuni subsp. jejuni 81-176 3-deoxy-D-manno-octulosonic-acid transferase YP_001000403.1 659564 D 354242 CDS YP_001000404.1 121612323 4682965 660702..661454 1 NC_008787.1 identified by match to protein family HMM PF00849; RNA pseudouridine synthase family protein 661454 4682965 CJJ81176_0731 Campylobacter jejuni subsp. jejuni 81-176 RNA pseudouridine synthase family protein YP_001000404.1 660702 D 354242 CDS YP_001000405.1 121613116 4682375 661522..662859 1 NC_008787.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 662859 ffh 4682375 ffh Campylobacter jejuni subsp. jejuni 81-176 signal recognition particle protein YP_001000405.1 661522 D 354242 CDS YP_001000406.1 121612199 4683147 662924..663151 1 NC_008787.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 663151 rpsP 4683147 rpsP Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S16 YP_001000406.1 662924 D 354242 CDS YP_001000407.1 121613747 4682632 663154..663396 1 NC_008787.1 hypothetical protein 663396 4682632 CJJ81176_0734 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000407.1 663154 D 354242 CDS YP_001000408.1 121612604 4682772 663389..663928 1 NC_008787.1 identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 663928 rimM 4682772 rimM Campylobacter jejuni subsp. jejuni 81-176 16S rRNA processing protein RimM YP_001000408.1 663389 D 354242 CDS YP_001000409.1 121613550 4682347 663925..664629 1 NC_008787.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 664629 trmD 4682347 trmD Campylobacter jejuni subsp. jejuni 81-176 tRNA (guanine-N(1)-)-methyltransferase YP_001000409.1 663925 D 354242 CDS YP_001000410.1 121612407 4682519 664640..664996 1 NC_008787.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 664996 rplS 4682519 rplS Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L19 YP_001000410.1 664640 D 354242 CDS YP_001000411.1 121613557 4682231 665129..665542 1 NC_008787.1 identified by match to protein family HMM PF00576; match to protein family HMM TIGR02962; transthyretin-like protein 665542 4682231 CJJ81176_0738 Campylobacter jejuni subsp. jejuni 81-176 transthyretin-like protein YP_001000411.1 665129 D 354242 CDS YP_001000412.1 121612264 4682085 665566..666906 1 NC_008787.1 identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358; 3-deoxy-7-phosphoheptulonate synthase 666906 4682085 CJJ81176_0739 Campylobacter jejuni subsp. jejuni 81-176 3-deoxy-7-phosphoheptulonate synthase YP_001000412.1 665566 D 354242 CDS YP_001000413.1 121612619 4682488 666903..667232 1 NC_008787.1 identified by match to protein family HMM PF03960; hypothetical protein 667232 4682488 CJJ81176_0740 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000413.1 666903 D 354242 CDS YP_001000414.1 121613428 4682253 667680..671282 1 NC_008787.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 671282 dnaE 4682253 dnaE Campylobacter jejuni subsp. jejuni 81-176 DNA polymerase III subunit alpha YP_001000414.1 667680 D 354242 CDS YP_001000415.1 121613343 4682773 complement(671295..671927) 1 NC_008787.1 identified by match to protein family HMM TIGR00044; hypothetical protein 671927 4682773 CJJ81176_0742 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000415.1 671295 R 354242 CDS YP_001000416.1 121612344 4682885 complement(671963..672712) 1 NC_008787.1 identified by match to protein family HMM PF00669; flagellin subunit protein FlaC 672712 flaC 4682885 flaC Campylobacter jejuni subsp. jejuni 81-176 flagellin subunit protein FlaC YP_001000416.1 671963 R 354242 CDS YP_001000417.1 121612181 4682321 complement(672751..673221) 1 NC_008787.1 hypothetical protein 673221 4682321 CJJ81176_0744 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000417.1 672751 R 354242 CDS YP_001000418.1 121613646 4682682 complement(673234..674049) 1 NC_008787.1 identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; HemK family modification methylase 674049 4682682 CJJ81176_0745 Campylobacter jejuni subsp. jejuni 81-176 HemK family modification methylase YP_001000418.1 673234 R 354242 CDS YP_001000419.1 121612499 4682129 complement(674046..675233) 1 NC_008787.1 identified by match to protein family HMM PF01435; M48 family peptidase 675233 4682129 CJJ81176_0746 Campylobacter jejuni subsp. jejuni 81-176 M48 family peptidase YP_001000419.1 674046 R 354242 CDS YP_001000420.1 121612385 4683650 675361..675546 1 NC_008787.1 hypothetical protein 675546 4683650 CJJ81176_0747 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000420.1 675361 D 354242 CDS YP_001000421.1 121613022 4682264 complement(675543..676085) 1 NC_008787.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 676085 mogA 4682264 mogA Campylobacter jejuni subsp. jejuni 81-176 molybdenum cofactor biosynthesis protein MogA YP_001000421.1 675543 R 354242 CDS YP_001000422.1 121613097 4683312 complement(676106..677089) 1 NC_008787.1 identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383; magnesium and cobalt transport protein CorA 677089 corA 4683312 corA Campylobacter jejuni subsp. jejuni 81-176 magnesium and cobalt transport protein CorA YP_001000422.1 676106 R 354242 CDS YP_001000423.1 121613181 4683170 677206..678252 1 NC_008787.1 ABC transporter, periplasmic substrate-binding protein 678252 4683170 CJJ81176_0750 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, periplasmic substrate-binding protein YP_001000423.1 677206 D 354242 CDS YP_001000424.1 121612174 4683074 678263..679588 1 NC_008787.1 hypothetical protein 679588 4683074 CJJ81176_0751 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000424.1 678263 D 354242 CDS YP_001000425.1 121613313 4682691 679588..680394 1 NC_008787.1 hypothetical protein 680394 4682691 CJJ81176_0752 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000425.1 679588 D 354242 CDS YP_001000426.1 121612356 4682919 680391..681230 1 NC_008787.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 681230 4682919 CJJ81176_0753 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, permease protein YP_001000426.1 680391 D 354242 CDS YP_001000427.1 121613458 4682317 681231..682010 1 NC_008787.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 682010 4682317 CJJ81176_0754 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, permease protein YP_001000427.1 681231 D 354242 CDS YP_001000428.1 121612568 4682734 682014..683003 1 NC_008787.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 683003 4682734 CJJ81176_0755 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein YP_001000428.1 682014 D 354242 CDS YP_001000429.1 121612942 4682811 683000..683638 1 NC_008787.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD family hydrolase 683638 4682811 CJJ81176_0756 Campylobacter jejuni subsp. jejuni 81-176 HAD family hydrolase YP_001000429.1 683000 D 354242 CDS YP_001000430.1 121612379 4683779 complement(683662..684417) 1 NC_008787.1 identified by match to protein family HMM PF00497; cjaC protein 684417 cjaC 4683779 cjaC Campylobacter jejuni subsp. jejuni 81-176 cjaC protein YP_001000430.1 683662 R 354242 CDS YP_001000431.1 121613399 4682280 684738..685379 1 NC_008787.1 hypothetical protein 685379 4682280 CJJ81176_0758 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000431.1 684738 D 354242 CDS YP_001000432.1 121612895 4682806 685401..687329 1 NC_008787.1 hypothetical protein 687329 4682806 CJJ81176_0759 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000432.1 685401 D 354242 CDS YP_001000433.1 121613631 4683427 687341..687775 1 NC_008787.1 identified by match to protein family HMM PF05860; match to protein family HMM TIGR01901; hemagglutination domain-containing protein 687775 4683427 CJJ81176_0760 Campylobacter jejuni subsp. jejuni 81-176 hemagglutination domain-containing protein YP_001000433.1 687341 D 354242 CDS YP_001000434.1 121612966 4682266 688041..689189 1 NC_008787.1 hypothetical protein 689189 4682266 CJJ81176_0761 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000434.1 688041 D 354242 CDS YP_001000435.1 121612290 4683340 689255..689380 1 NC_008787.1 hypothetical protein 689380 4683340 CJJ81176_0762 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000435.1 689255 D 354242 CDS YP_001000436.1 121613083 4682443 689540..690619 1 NC_008787.1 hypothetical protein 690619 4682443 CJJ81176_0763 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000436.1 689540 D 354242 CDS YP_001000437.1 121613175 4683195 690715..692241 1 NC_008787.1 putative outer-membrane protein 692241 4683195 CJJ81176_0764 Campylobacter jejuni subsp. jejuni 81-176 putative outer-membrane protein YP_001000437.1 690715 D 354242 CDS YP_001000438.1 121612424 4683072 692260..692403 1 NC_008787.1 hypothetical protein 692403 4683072 CJJ81176_0765 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000438.1 692260 D 354242 CDS YP_001000439.1 121613364 4682817 complement(698302..698454) 1 NC_008787.1 hypothetical protein 698454 4682817 CJJ81176_0770 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000439.1 698302 R 354242 CDS YP_001000440.1 121613468 4682236 698848..700029 1 NC_008787.1 hypothetical protein 700029 4682236 CJJ81176_0772 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000440.1 698848 D 354242 CDS YP_001000441.1 121613134 4682854 700246..701037 1 NC_008787.1 Acts as a negative regulator of the grpE-dnaK-dnaJ and groELS class I heat shock operons by preventing heat-shock induction; heat-inducible transcription repressor 701037 hrcA 4682854 hrcA Campylobacter jejuni subsp. jejuni 81-176 heat-inducible transcription repressor YP_001000441.1 700246 D 354242 CDS YP_001000442.1 121612117 4683127 701034..701564 1 NC_008787.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 701564 grpE 4683127 grpE Campylobacter jejuni subsp. jejuni 81-176 heat shock protein GrpE YP_001000442.1 701034 D 354242 CDS YP_001000443.1 121613084 4682428 701587..703458 1 NC_008787.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 703458 dnaK 4682428 dnaK Campylobacter jejuni subsp. jejuni 81-176 molecular chaperone DnaK YP_001000443.1 701587 D 354242 CDS YP_001000444.1 121612129 4683188 703597..705507 1 NC_008787.1 identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit 705507 4683188 CJJ81176_0776 Campylobacter jejuni subsp. jejuni 81-176 type I restriction-modification system, M subunit YP_001000444.1 703597 D 354242 CDS YP_001000445.1 121613222 4682478 705504..706772 1 NC_008787.1 identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein 706772 4682478 CJJ81176_0777 Campylobacter jejuni subsp. jejuni 81-176 type I restriction modification DNA specificity domain-containing protein YP_001000445.1 705504 D 354242 CDS YP_001000446.1 121613205 4683034 706872..707465 1 NC_008787.1 hypothetical protein 707465 4683034 CJJ81176_0778 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000446.1 706872 D 354242 CDS YP_001000447.1 121613538 4683050 707481..708470 1 NC_008787.1 hypothetical protein 708470 4683050 CJJ81176_0779 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000447.1 707481 D 354242 CDS YP_001000448.1 121612543 4682370 708487..711402 1 NC_008787.1 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; type I site-specific deoxyribonuclease chain R 711402 4682370 CJJ81176_0780 Campylobacter jejuni subsp. jejuni 81-176 type I site-specific deoxyribonuclease chain R YP_001000448.1 708487 D 354242 CDS YP_001000449.1 121613688 4683068 711498..712460 1 NC_008787.1 hypothetical protein 712460 4683068 CJJ81176_0781 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000449.1 711498 D 354242 CDS YP_001000450.1 121612645 4682405 712530..712871 1 NC_008787.1 hypothetical protein 712871 4682405 CJJ81176_0782 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000450.1 712530 D 354242 CDS YP_001000451.1 121613603 4683737 complement(712921..714090) 1 NC_008787.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 714090 aspC 4683737 aspC Campylobacter jejuni subsp. jejuni 81-176 aspartate aminotransferase YP_001000451.1 712921 R 354242 CDS YP_001000452.1 121612414 4683773 complement(714262..714900) 1 NC_008787.1 identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine acetyltransferase 714900 cysE 4683773 cysE Campylobacter jejuni subsp. jejuni 81-176 serine acetyltransferase YP_001000452.1 714262 R 354242 CDS YP_001000453.1 121613374 4682228 complement(714901..716733) 1 NC_008787.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 716733 speA 4682228 speA Campylobacter jejuni subsp. jejuni 81-176 arginine decarboxylase YP_001000453.1 714901 R 354242 CDS YP_001000454.1 121612446 4682836 complement(716733..717959) 1 NC_008787.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 717959 hisS 4682836 hisS Campylobacter jejuni subsp. jejuni 81-176 histidyl-tRNA synthetase YP_001000454.1 716733 R 354242 CDS YP_001000455.1 121612951 4682169 complement(717956..718534) 1 NC_008787.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 718534 tmk 4682169 tmk Campylobacter jejuni subsp. jejuni 81-176 thymidylate kinase YP_001000455.1 717956 R 354242 CDS YP_001000456.1 121612588 4683349 complement(718525..719001) 1 NC_008787.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 719001 coaD 4683349 coaD Campylobacter jejuni subsp. jejuni 81-176 phosphopantetheine adenylyltransferase YP_001000456.1 718525 R 354242 CDS YP_001000457.1 121613191 4682539 complement(719041..719604) 1 NC_008787.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 719604 4682539 CJJ81176_0789 Campylobacter jejuni subsp. jejuni 81-176 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001000457.1 719041 R 354242 CDS YP_001000458.1 121613741 4683056 complement(719601..720263) 1 NC_008787.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 720263 flgA 4683056 flgA Campylobacter jejuni subsp. jejuni 81-176 flagellar basal body P-ring biosynthesis protein FlgA YP_001000458.1 719601 R 354242 CDS YP_001000459.1 121612528 4683561 complement(720347..721123) 1 NC_008787.1 identified by match to protein family HMM PF03180; NLPA family lipoprotein 721123 4683561 CJJ81176_0791 Campylobacter jejuni subsp. jejuni 81-176 NLPA family lipoprotein YP_001000459.1 720347 R 354242 CDS YP_001000460.1 121612169 4683264 complement(721133..721903) 1 NC_008787.1 identified by match to protein family HMM PF03180; NLPA family lipoprotein 721903 4683264 CJJ81176_0792 Campylobacter jejuni subsp. jejuni 81-176 NLPA family lipoprotein YP_001000460.1 721133 R 354242 CDS YP_001000461.1 121613296 4682652 complement(721952..722725) 1 NC_008787.1 identified by match to protein family HMM PF03180; NLPA family lipoprotein 722725 4682652 CJJ81176_0793 Campylobacter jejuni subsp. jejuni 81-176 NLPA family lipoprotein YP_001000461.1 721952 R 354242 CDS YP_001000462.1 121612450 4682954 complement(722917..723828) 1 NC_008787.1 identified by match to protein family HMM PF00528; ABC transporter, permease protein 723828 4682954 CJJ81176_0794 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, permease protein YP_001000462.1 722917 R 354242 CDS YP_001000463.1 121612538 4682165 complement(723825..724835) 1 NC_008787.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 724835 4682165 CJJ81176_0795 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein YP_001000463.1 723825 R 354242 CDS YP_001000464.1 121613655 4683192 complement(724840..727452) 1 NC_008787.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 727452 valS 4683192 valS Campylobacter jejuni subsp. jejuni 81-176 valyl-tRNA synthetase YP_001000464.1 724840 R 354242 CDS YP_001000465.1 121612758 4682213 complement(727475..728494) 1 NC_008787.1 hypothetical protein 728494 4682213 CJJ81176_0797 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000465.1 727475 R 354242 CDS YP_001000466.1 121613648 4683592 728623..730653 1 NC_008787.1 identified by match to protein family HMM PF00580; putative ATP-dependent DNA helicase 730653 4683592 CJJ81176_0798 Campylobacter jejuni subsp. jejuni 81-176 putative ATP-dependent DNA helicase YP_001000466.1 728623 D 354242 CDS YP_001000467.1 121612113 4682647 730694..731434 1 NC_008787.1 major antigenic peptide PEB2 731434 4682647 CJJ81176_0799 Campylobacter jejuni subsp. jejuni 81-176 major antigenic peptide PEB2 YP_001000467.1 730694 D 354242 CDS YP_001000468.1 121613237 4682401 731533..732060 1 NC_008787.1 identified by match to protein family HMM PF00578; thiol peroxidase 732060 tpx 4682401 tpx Campylobacter jejuni subsp. jejuni 81-176 thiol peroxidase YP_001000468.1 731533 D 354242 CDS YP_001000469.1 121612508 4683033 732307..735078 1 NC_008787.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 735078 napA 4683033 napA Campylobacter jejuni subsp. jejuni 81-176 nitrate reductase catalytic subunit YP_001000469.1 732307 D 354242 CDS YP_001000470.1 121613229 4683486 735096..735836 1 NC_008787.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 735836 napG 4683486 napG Campylobacter jejuni subsp. jejuni 81-176 quinol dehydrogenase periplasmic component YP_001000470.1 735096 D 354242 CDS YP_001000471.1 121612888 4683021 735836..736615 1 NC_008787.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 736615 napH 4683021 napH Campylobacter jejuni subsp. jejuni 81-176 quinol dehydrogenase membrane component YP_001000471.1 735836 D 354242 CDS YP_001000472.1 121613406 4683422 736615..737136 1 NC_008787.1 identified by match to protein family HMM PF03892; periplasmic nitrate reductase, small subunit 737136 napB 4683422 napB Campylobacter jejuni subsp. jejuni 81-176 periplasmic nitrate reductase, small subunit YP_001000472.1 736615 D 354242 CDS YP_001000473.1 121612123 4683093 737141..738055 1 NC_008787.1 napL protein 738055 napL 4683093 napL Campylobacter jejuni subsp. jejuni 81-176 napL protein YP_001000473.1 737141 D 354242 CDS YP_001000474.1 121613698 4682454 738048..738386 1 NC_008787.1 napD protein 738386 napD 4682454 napD Campylobacter jejuni subsp. jejuni 81-176 napD protein YP_001000474.1 738048 D 354242 CDS YP_001000475.1 121612971 4682413 738396..738569 1 NC_008787.1 hypothetical protein 738569 4682413 CJJ81176_0807 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000475.1 738396 D 354242 CDS YP_001000476.1 121612225 4683329 738651..738896 1 NC_008787.1 hypothetical protein 738896 4683329 CJJ81176_0808 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000476.1 738651 D 354242 CDS YP_001000477.1 121613182 4682573 738893..739384 1 NC_008787.1 hypothetical protein 739384 4682573 CJJ81176_0809 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000477.1 738893 D 354242 CDS YP_001000478.1 121612457 4683075 739353..740471 1 NC_008787.1 identified by match to protein family HMM PF01743; polyA polymerase family protein 740471 4683075 CJJ81176_0810 Campylobacter jejuni subsp. jejuni 81-176 polyA polymerase family protein YP_001000478.1 739353 D 354242 CDS YP_001000479.1 121612577 4682150 740468..741292 1 NC_008787.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 741292 purU 4682150 purU Campylobacter jejuni subsp. jejuni 81-176 formyltetrahydrofolate deformylase YP_001000479.1 740468 D 354242 CDS YP_001000480.1 121613123 4682702 complement(741289..742557) 1 NC_008787.1 identified by match to protein family HMM PF00266; aminotransferase, putative 742557 4682702 CJJ81176_0812 Campylobacter jejuni subsp. jejuni 81-176 aminotransferase, putative YP_001000480.1 741289 R 354242 CDS YP_001000481.1 121613525 4683142 742599..743477 1 NC_008787.1 identified by match to protein family HMM PF03008; hypothetical protein 743477 4683142 CJJ81176_0813 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000481.1 742599 D 354242 CDS YP_001000482.1 121612725 4683786 743481..744500 1 NC_008787.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 744500 4683786 CJJ81176_0814 Campylobacter jejuni subsp. jejuni 81-176 sensor histidine kinase YP_001000482.1 743481 D 354242 CDS YP_001000483.1 121612722 4683644 744619..745893 1 NC_008787.1 hypothetical protein 745893 4683644 CJJ81176_0815 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000483.1 744619 D 354242 CDS YP_001000484.1 121613032 4683645 complement(745952..747379) 1 NC_008787.1 Mur ligase family protein 747379 4683645 CJJ81176_0816 Campylobacter jejuni subsp. jejuni 81-176 Mur ligase family protein YP_001000484.1 745952 R 354242 CDS YP_001000485.1 121612103 4683252 complement(747380..748099) 1 NC_008787.1 identified by match to protein family HMM PF00561; hypothetical protein 748099 4683252 CJJ81176_0817 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000485.1 747380 R 354242 CDS YP_001000486.1 121612991 4682357 complement(748101..748316) 1 NC_008787.1 identified by match to protein family HMM TIGR01552; prevent-host-death family protein 748316 4682357 CJJ81176_0818 Campylobacter jejuni subsp. jejuni 81-176 prevent-host-death family protein YP_001000486.1 748101 R 354242 CDS YP_001000487.1 121612276 4683299 complement(748376..749416) 1 NC_008787.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 749416 ddl 4683299 ddl Campylobacter jejuni subsp. jejuni 81-176 D-alanyl-alanine synthetase A YP_001000487.1 748376 R 354242 CDS YP_001000488.1 121613230 4682465 complement(749426..749977) 1 NC_008787.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 749977 ruvA 4682465 ruvA Campylobacter jejuni subsp. jejuni 81-176 Holliday junction DNA helicase RuvA YP_001000488.1 749426 R 354242 CDS YP_001000489.1 121613381 4683018 complement(749953..751812) 1 NC_008787.1 hypothetical protein 751812 4683018 CJJ81176_0821 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000489.1 749953 R 354242 CDS YP_001000490.1 121612540 4682845 751916..753367 1 NC_008787.1 identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN 753367 mviN 4682845 mviN Campylobacter jejuni subsp. jejuni 81-176 integral membrane protein MviN YP_001000490.1 751916 D 354242 CDS YP_001000491.1 121612326 4683125 753367..754755 1 NC_008787.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 754755 cysS 4683125 cysS Campylobacter jejuni subsp. jejuni 81-176 cysteinyl-tRNA synthetase YP_001000491.1 753367 D 354242 CDS YP_001000492.1 121613275 4682362 754748..756490 1 NC_008787.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter, ATP-binding protein/permease MsbA, putative 756490 4682362 CJJ81176_0824 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein/permease MsbA, putative YP_001000492.1 754748 D 354242 CDS YP_001000493.1 121612110 4682973 756522..757580 1 NC_008787.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 757580 pyrD 4682973 pyrD Campylobacter jejuni subsp. jejuni 81-176 dihydroorotate dehydrogenase 2 YP_001000493.1 756522 D 354242 CDS YP_001000494.1 121613273 4682400 757577..758827 1 NC_008787.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 758827 4682400 CJJ81176_0826 Campylobacter jejuni subsp. jejuni 81-176 M16 family peptidase YP_001000494.1 757577 D 354242 CDS YP_001000495.1 121613216 4682963 758820..759716 1 NC_008787.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 759716 dapA 4682963 dapA Campylobacter jejuni subsp. jejuni 81-176 dihydrodipicolinate synthase YP_001000495.1 758820 D 354242 CDS YP_001000496.1 121613526 4683022 759716..760495 1 NC_008787.1 Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase 760495 4683022 CJJ81176_0828 Campylobacter jejuni subsp. jejuni 81-176 7-alpha-hydroxysteroid dehydrogenase YP_001000496.1 759716 D 354242 CDS YP_001000497.1 121612922 4682088 complement(760536..760841) 1 NC_008787.1 hypothetical protein 760841 4682088 CJJ81176_0829 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000497.1 760536 R 354242 CDS YP_001000498.1 121613616 4683392 complement(760853..761449) 1 NC_008787.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 761449 4683392 CJJ81176_0830 Campylobacter jejuni subsp. jejuni 81-176 metallo-beta-lactamase family protein YP_001000498.1 760853 R 354242 CDS YP_001000499.1 121613744 4683760 761523..762263 1 NC_008787.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 762263 nadE 4683760 nadE Campylobacter jejuni subsp. jejuni 81-176 NAD synthetase YP_001000499.1 761523 D 354242 CDS YP_001000500.1 121612976 4682588 762267..763193 1 NC_008787.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 763193 lpxK 4682588 lpxK Campylobacter jejuni subsp. jejuni 81-176 tetraacyldisaccharide 4'-kinase YP_001000500.1 762267 D 354242 CDS YP_001000501.1 121613411 4683318 763190..764602 1 NC_008787.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 764602 thrC 4683318 thrC Campylobacter jejuni subsp. jejuni 81-176 threonine synthase YP_001000501.1 763190 D 354242 CDS YP_001000502.1 121612623 4682770 764599..765318 1 NC_008787.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 765318 kdsB 4682770 kdsB Campylobacter jejuni subsp. jejuni 81-176 3-deoxy-manno-octulosonate cytidylyltransferase YP_001000502.1 764599 D 354242 CDS YP_001000503.1 121612887 4682141 765409..766743 1 NC_008787.1 hypothetical protein 766743 4682141 CJJ81176_0835 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000503.1 765409 D 354242 CDS YP_001000504.1 121613400 4683431 766837..767607 1 NC_008787.1 identified by match to protein family HMM PF00497; amino acid-binding protein 767607 4683431 CJJ81176_0836 Campylobacter jejuni subsp. jejuni 81-176 amino acid-binding protein YP_001000504.1 766837 D 354242 CDS YP_001000505.1 121612246 4682809 complement(767623..768357) 1 NC_008787.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 768357 fliP 4682809 fliP Campylobacter jejuni subsp. jejuni 81-176 flagellar biosynthesis protein FliP YP_001000505.1 767623 R 354242 CDS YP_001000506.1 121613630 4682533 768500..769789 1 NC_008787.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 769789 glmU 4682533 glmU Campylobacter jejuni subsp. jejuni 81-176 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001000506.1 768500 D 354242 CDS YP_001000507.1 121612856 4682265 769786..770940 1 NC_008787.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 770940 coaBC 4682265 coaBC Campylobacter jejuni subsp. jejuni 81-176 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_001000507.1 769786 D 354242 CDS YP_001000508.1 121613752 4683466 770943..771554 1 NC_008787.1 hypothetical protein 771554 4683466 CJJ81176_0840 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000508.1 770943 D 354242 CDS YP_001000509.1 121612397 4682235 771558..772226 1 NC_008787.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase 772226 uppS 4682235 uppS Campylobacter jejuni subsp. jejuni 81-176 undecaprenyl diphosphate synthase YP_001000509.1 771558 D 354242 CDS YP_001000510.1 121613088 4682262 772223..772999 1 NC_008787.1 identified by match to protein family HMM PF01478; match to protein family HMM PF06750; A24 family peptidase 772999 4682262 CJJ81176_0842 Campylobacter jejuni subsp. jejuni 81-176 A24 family peptidase YP_001000510.1 772223 D 354242 CDS YP_001000511.1 121613133 4683177 772999..774024 1 NC_008787.1 identified by match to protein family HMM PF03739; hypothetical protein 774024 4683177 CJJ81176_0843 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000511.1 772999 D 354242 CDS YP_001000512.1 121613330 4683140 774021..774746 1 NC_008787.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 774746 truA 4683140 truA Campylobacter jejuni subsp. jejuni 81-176 tRNA pseudouridine synthase A YP_001000512.1 774021 D 354242 CDS YP_001000513.1 121613621 4682900 complement(774743..775954) 1 NC_008787.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 775954 ilvA 4682900 ilvA Campylobacter jejuni subsp. jejuni 81-176 threonine dehydratase YP_001000513.1 774743 R 354242 CDS YP_001000514.1 121612172 4683759 complement(775954..776367) 1 NC_008787.1 identified by match to protein family HMM PF02629; CoA-binding domain-containing protein 776367 4683759 CJJ81176_0846 Campylobacter jejuni subsp. jejuni 81-176 CoA-binding domain-containing protein YP_001000514.1 775954 R 354242 CDS YP_001000515.1 121612345 4682668 776486..776902 1 NC_008787.1 identified by match to protein family HMM PF04323; hypothetical protein 776902 4682668 CJJ81176_0847 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000515.1 776486 D 354242 CDS YP_001000516.1 121613439 4682322 complement(776889..777962) 1 NC_008787.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 777962 trmA 4682322 trmA Campylobacter jejuni subsp. jejuni 81-176 tRNA (uracil-5-)-methyltransferase YP_001000516.1 776889 R 354242 CDS YP_001000517.1 121613640 4682741 complement(777959..779692) 1 NC_008787.1 identified by match to protein family HMM PF03553; Na+/H+ antiporter family protein 779692 4682741 CJJ81176_0849 Campylobacter jejuni subsp. jejuni 81-176 Na+/H+ antiporter family protein YP_001000517.1 777959 R 354242 CDS YP_001000518.1 121612926 4682123 complement(779689..780438) 1 NC_008787.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase/reductase family oxidoreductase 780438 4682123 CJJ81176_0850 Campylobacter jejuni subsp. jejuni 81-176 short chain dehydrogenase/reductase family oxidoreductase YP_001000518.1 779689 R 354242 CDS YP_001000519.1 121612267 4683384 complement(780435..781661) 1 NC_008787.1 identified by match to protein family HMM PF00023; ankyrin repeat-containing protein 781661 4683384 CJJ81176_0851 Campylobacter jejuni subsp. jejuni 81-176 ankyrin repeat-containing protein YP_001000519.1 780435 R 354242 CDS YP_001000520.1 121612675 4682487 complement(781721..784267) 1 NC_008787.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 784267 acnB 4682487 acnB Campylobacter jejuni subsp. jejuni 81-176 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001000520.1 781721 R 354242 CDS YP_001000521.1 121613265 4683687 784322..784774 1 NC_008787.1 identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine S-methyltransferase 784774 ogt 4683687 ogt Campylobacter jejuni subsp. jejuni 81-176 methylated-DNA--protein-cysteine S-methyltransferase YP_001000521.1 784322 D 354242 CDS YP_001000522.1 121612484 4682983 complement(784766..785707) 1 NC_008787.1 hypothetical protein 785707 4682983 CJJ81176_0854 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000522.1 784766 R 354242 CDS YP_001000523.1 121612346 4683754 complement(785711..787597) 1 NC_008787.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 787597 metS 4683754 metS Campylobacter jejuni subsp. jejuni 81-176 methionyl-tRNA synthetase YP_001000523.1 785711 R 354242 CDS YP_001000524.1 121613051 4682333 complement(787607..787771) 1 NC_008787.1 hypothetical protein 787771 4682333 CJJ81176_0856 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000524.1 787607 R 354242 CDS YP_001000525.1 121612163 4683221 complement(787797..788639) 1 NC_008787.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 788639 fbp 4683221 fbp Campylobacter jejuni subsp. jejuni 81-176 fructose-1,6-bisphosphatase YP_001000525.1 787797 R 354242 CDS YP_001000526.1 121613662 4682636 complement(788641..789132) 1 NC_008787.1 identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176; molybdopterin-guanine dinucleotide biosynthesis protein MobB 789132 mobB 4682636 mobB Campylobacter jejuni subsp. jejuni 81-176 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_001000526.1 788641 R 354242 CDS YP_001000527.1 121612854 4683641 complement(789610..791235) 1 NC_008787.1 identified by match to protein family HMM PF01464; soluble lytic murein transglycosylase, putative 791235 4683641 CJJ81176_0859 Campylobacter jejuni subsp. jejuni 81-176 soluble lytic murein transglycosylase, putative YP_001000527.1 789610 R 354242 CDS YP_001000528.1 121613590 4683474 complement(791232..791513) 1 NC_008787.1 identified by match to protein family HMM PF02325; YGGT family protein 791513 4683474 CJJ81176_0860 Campylobacter jejuni subsp. jejuni 81-176 YGGT family protein YP_001000528.1 791232 R 354242 CDS YP_001000529.1 121612680 4683370 complement(791516..792811) 1 NC_008787.1 charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase 792811 gltX-1 4683370 gltX-1 Campylobacter jejuni subsp. jejuni 81-176 glutamylglutaminyl-tRNA synthetase YP_001000529.1 791516 R 354242 CDS YP_001000530.1 121613350 4683688 792897..794021 1 NC_008787.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 794021 4683688 CJJ81176_0862 Campylobacter jejuni subsp. jejuni 81-176 Ser/Thr protein phosphatase family protein YP_001000530.1 792897 D 354242 CDS YP_001000531.1 121612932 4682872 794018..794818 1 NC_008787.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 794818 psd 4682872 psd Campylobacter jejuni subsp. jejuni 81-176 phosphatidylserine decarboxylase YP_001000531.1 794018 D 354242 CDS YP_001000532.1 121612445 4683394 complement(794815..795096) 1 NC_008787.1 identified by match to protein family HMM TIGR00789; FlhB domain-containing protein 795096 4683394 CJJ81176_0864 Campylobacter jejuni subsp. jejuni 81-176 FlhB domain-containing protein YP_001000532.1 794815 R 354242 CDS YP_001000533.1 121613569 4682174 complement(795093..797342) 1 NC_008787.1 hypothetical protein 797342 4682174 CJJ81176_0865 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000533.1 795093 R 354242 CDS YP_001000534.1 121612847 4683201 complement(797335..798522) 1 NC_008787.1 identified by match to protein family HMM PF07690; major facilitator family protein 798522 4683201 CJJ81176_0866 Campylobacter jejuni subsp. jejuni 81-176 major facilitator family protein YP_001000534.1 797335 R 354242 CDS YP_001000535.1 121613394 4683481 complement(798500..799003) 1 NC_008787.1 hypothetical protein 799003 4683481 CJJ81176_0867 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000535.1 798500 R 354242 CDS YP_001000536.1 121612690 4682815 complement(799003..799218) 1 NC_008787.1 hypothetical protein 799218 4682815 CJJ81176_0868 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000536.1 799003 R 354242 CDS YP_001000537.1 121613210 4683680 complement(799329..800603) 1 NC_008787.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 800603 hemL 4683680 hemL Campylobacter jejuni subsp. jejuni 81-176 glutamate-1-semialdehyde aminotransferase YP_001000537.1 799329 R 354242 CDS YP_001000538.1 121612482 4683046 complement(800600..800947) 1 NC_008787.1 hypothetical protein 800947 4683046 CJJ81176_0870 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000538.1 800600 R 354242 CDS YP_001000539.1 121613160 4683105 801027..801875 1 NC_008787.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 801875 folD 4683105 folD Campylobacter jejuni subsp. jejuni 81-176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001000539.1 801027 D 354242 CDS YP_001000540.1 121612845 4683111 801885..802733 1 NC_008787.1 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 802733 lepB 4683111 lepB Campylobacter jejuni subsp. jejuni 81-176 signal peptidase I YP_001000540.1 801885 D 354242 CDS YP_001000541.1 121612389 4683491 complement(802755..803915) 1 NC_008787.1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis MoeA protein, putative 803915 4683491 CJJ81176_0873 Campylobacter jejuni subsp. jejuni 81-176 molybdopterin biosynthesis MoeA protein, putative YP_001000541.1 802755 R 354242 CDS YP_001000542.1 121612784 4682260 complement(803912..805168) 1 NC_008787.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 805168 murA 4682260 murA Campylobacter jejuni subsp. jejuni 81-176 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001000542.1 803912 R 354242 CDS YP_001000543.1 121613288 4683558 complement(805234..805662) 1 NC_008787.1 hypothetical protein 805662 4683558 CJJ81176_0875 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000543.1 805234 R 354242 CDS YP_001000544.1 121612941 4682950 805757..806629 1 NC_008787.1 identified by match to protein family HMM PF00892; integral membrane protein 806629 4682950 CJJ81176_0876 Campylobacter jejuni subsp. jejuni 81-176 integral membrane protein YP_001000544.1 805757 D 354242 CDS YP_001000545.1 121612461 4683381 complement(806616..807182) 1 NC_008787.1 identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; para-aminobenzoate synthase glutamine amidotransferase, component II 807182 pabA 4683381 pabA Campylobacter jejuni subsp. jejuni 81-176 para-aminobenzoate synthase glutamine amidotransferase, component II YP_001000545.1 806616 R 354242 CDS YP_001000546.1 121612257 4682156 complement(807179..808963) 1 NC_008787.1 identified by match to protein family HMM PF00425; para-aminobenzoate synthase glutamine amidotransferase, component I 808963 pabB 4682156 pabB Campylobacter jejuni subsp. jejuni 81-176 para-aminobenzoate synthase glutamine amidotransferase, component I YP_001000546.1 807179 R 354242 CDS YP_001000547.1 121612957 4682503 complement(808953..810017) 1 NC_008787.1 identified by match to protein family HMM PF00589; phage integrase family site specific recombinase 810017 4682503 CJJ81176_0879 Campylobacter jejuni subsp. jejuni 81-176 phage integrase family site specific recombinase YP_001000547.1 808953 R 354242 CDS YP_001000548.1 121613617 4683335 810644..811306 1 NC_008787.1 thiol:disulfide interchange protein DsbA 811306 dsbA 4683335 dsbA Campylobacter jejuni subsp. jejuni 81-176 thiol:disulfide interchange protein DsbA YP_001000548.1 810644 D 354242 CDS YP_001000549.1 121613190 4683761 811318..812112 1 NC_008787.1 putative disulfide oxidoreductase 812112 dsbB 4683761 dsbB Campylobacter jejuni subsp. jejuni 81-176 putative disulfide oxidoreductase YP_001000549.1 811318 D 354242 CDS YP_001000550.1 121612884 4683055 812200..814062 1 NC_008787.1 identified by match to protein family HMM PF05935; arylsulfate sulfotransferase, degenerate 814062 4683055 CJJ81176_0882 Campylobacter jejuni subsp. jejuni 81-176 arylsulfate sulfotransferase, degenerate YP_001000550.1 812200 D 354242 CDS YP_001000551.1 121613081 4683442 814118..814789 1 NC_008787.1 identified by match to protein family HMM PF01323; thiol:disulfide interchange protein DsbA, putative 814789 4683442 CJJ81176_0883 Campylobacter jejuni subsp. jejuni 81-176 thiol:disulfide interchange protein DsbA, putative YP_001000551.1 814118 D 354242 CDS YP_001000552.1 121612102 4683191 complement(814823..815200) 1 NC_008787.1 cytochrome c family protein, degenerate 815200 4683191 CJJ81176_0884 Campylobacter jejuni subsp. jejuni 81-176 cytochrome c family protein, degenerate YP_001000552.1 814823 R 354242 CDS YP_001000553.1 121613336 4682361 complement(815264..815809) 1 NC_008787.1 cytochrome C 815809 4682361 CJJ81176_0885 Campylobacter jejuni subsp. jejuni 81-176 cytochrome C YP_001000553.1 815264 R 354242 CDS YP_001000554.1 121612699 4682892 816019..816159 1 NC_008787.1 hypothetical protein 816159 4682892 CJJ81176_0886 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000554.1 816019 D 354242 CDS YP_001000555.1 121612192 4683671 complement(816147..816779) 1 NC_008787.1 putative periplasmic protein 816779 4683671 CJJ81176_0887 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000555.1 816147 R 354242 CDS YP_001000556.1 121612411 4682643 complement(816776..817018) 1 NC_008787.1 hypothetical protein 817018 4682643 CJJ81176_0888 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000556.1 816776 R 354242 CDS YP_001000557.1 121612769 4682238 complement(817002..818048) 1 NC_008787.1 hypothetical protein 818048 4682238 CJJ81176_0889 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000557.1 817002 R 354242 CDS YP_001000558.1 121613700 4683577 complement(818057..820192) 1 NC_008787.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 820192 flhA 4683577 flhA Campylobacter jejuni subsp. jejuni 81-176 flagellar biosynthesis protein FlhA YP_001000558.1 818057 R 354242 CDS YP_001000559.1 121612186 4682372 complement(820218..820628) 1 NC_008787.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; RrF2 family protein, putative 820628 4682372 CJJ81176_0891 Campylobacter jejuni subsp. jejuni 81-176 RrF2 family protein, putative YP_001000559.1 820218 R 354242 CDS YP_001000560.1 121612863 4682659 820803..821075 1 NC_008787.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 821075 rpsO 4682659 rpsO Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S15 YP_001000560.1 820803 D 354242 CDS YP_001000561.1 121613467 4683469 complement(821161..824001) 1 NC_008787.1 identified by match to protein family HMM PF01580; cell division protein FtsK, putative 824001 4683469 CJJ81176_0893 Campylobacter jejuni subsp. jejuni 81-176 cell division protein FtsK, putative YP_001000561.1 821161 R 354242 CDS YP_001000562.1 121612548 4682915 complement(824111..826363) 1 NC_008787.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; lagellar hook-associated protein FlgL 826363 4682915 CJJ81176_0894 Campylobacter jejuni subsp. jejuni 81-176 lagellar hook-associated protein FlgL YP_001000562.1 824111 R 354242 CDS YP_001000563.1 121613319 4682179 complement(826745..828676) 1 NC_008787.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 828676 4682179 CJJ81176_0897 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein YP_001000563.1 826745 R 354242 CDS YP_001000564.1 121612396 4682921 complement(828680..829969) 1 NC_008787.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 829969 4682921 CJJ81176_0898 Campylobacter jejuni subsp. jejuni 81-176 sensor histidine kinase YP_001000564.1 828680 R 354242 CDS YP_001000565.1 121613098 4682261 complement(829963..830625) 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 830625 4682261 CJJ81176_0899 Campylobacter jejuni subsp. jejuni 81-176 DNA-binding response regulator YP_001000565.1 829963 R 354242 CDS YP_001000566.1 121612205 4683171 complement(830612..832195) 1 NC_008787.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 832195 serA 4683171 serA Campylobacter jejuni subsp. jejuni 81-176 D-3-phosphoglycerate dehydrogenase YP_001000566.1 830612 R 354242 CDS YP_001000567.1 121612780 4682623 complement(832192..832680) 1 NC_008787.1 hypothetical protein 832680 4682623 CJJ81176_0901 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000567.1 832192 R 354242 CDS YP_001000568.1 121613103 4683568 complement(832680..834350) 1 NC_008787.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 834350 rpsA 4683568 rpsA Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S1 YP_001000568.1 832680 R 354242 CDS YP_001000569.1 121612663 4683315 complement(834482..835315) 1 NC_008787.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 835315 ispH 4683315 ispH Campylobacter jejuni subsp. jejuni 81-176 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001000569.1 834482 R 354242 CDS YP_001000570.1 121613725 4683705 complement(835305..836576) 1 NC_008787.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 836576 aroA 4683705 aroA Campylobacter jejuni subsp. jejuni 81-176 3-phosphoshikimate 1-carboxyvinyltransferase YP_001000570.1 835305 R 354242 CDS YP_001000571.1 121612808 4682555 complement(836588..838909) 1 NC_008787.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 838909 pheT 4682555 pheT Campylobacter jejuni subsp. jejuni 81-176 phenylalanyl-tRNA synthetase subunit beta YP_001000571.1 836588 R 354242 CDS YP_001000572.1 121613504 4683533 complement(838906..839898) 1 NC_008787.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 839898 pheS 4683533 pheS Campylobacter jejuni subsp. jejuni 81-176 phenylalanyl-tRNA synthetase subunit alpha YP_001000572.1 838906 R 354242 CDS YP_001000573.1 121612658 4682685 840021..840386 1 NC_008787.1 identified by match to protein family HMM PF01230; HIT family protein 840386 4682685 CJJ81176_0907 Campylobacter jejuni subsp. jejuni 81-176 HIT family protein YP_001000573.1 840021 D 354242 CDS YP_001000574.1 121613365 4683710 complement(840416..840985) 1 NC_008787.1 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme 840985 thiJ 4683710 thiJ Campylobacter jejuni subsp. jejuni 81-176 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme YP_001000574.1 840416 R 354242 CDS YP_001000575.1 121613286 4682869 complement(840978..841157) 1 NC_008787.1 hypothetical protein 841157 4682869 CJJ81176_0909 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000575.1 840978 R 354242 CDS YP_001000576.1 121612320 4682948 841241..841984 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine amino acid ABC transporter permease 841984 4682948 CJJ81176_0910 Campylobacter jejuni subsp. jejuni 81-176 His/Glu/Gln/Arg/opine amino acid ABC transporter permease YP_001000576.1 841241 D 354242 CDS YP_001000577.1 121612318 4682368 841977..842705 1 NC_008787.1 identified by match to protein family HMM PF00005; amino acid ABC transporter, ATP-binding protein 842705 4682368 CJJ81176_0911 Campylobacter jejuni subsp. jejuni 81-176 amino acid ABC transporter, ATP-binding protein YP_001000577.1 841977 D 354242 CDS YP_001000578.1 121613140 4682378 complement(842733..844199) 1 NC_008787.1 identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino acid carrier protein 844199 4682378 CJJ81176_0912 Campylobacter jejuni subsp. jejuni 81-176 amino acid carrier protein YP_001000578.1 842733 R 354242 CDS YP_001000579.1 121612429 4683202 complement(844303..844770) 1 NC_008787.1 identified by match to protein family HMM PF00588; RNA methyltransferase 844770 4683202 CJJ81176_0913 Campylobacter jejuni subsp. jejuni 81-176 RNA methyltransferase YP_001000579.1 844303 R 354242 CDS YP_001000580.1 121613298 4682205 complement(844773..845759) 1 NC_008787.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 845759 alr 4682205 alr Campylobacter jejuni subsp. jejuni 81-176 alanine racemase YP_001000580.1 844773 R 354242 CDS YP_001000581.1 121612822 4682936 complement(845760..846737) 1 NC_008787.1 hypothetical protein 846737 4682936 CJJ81176_0915 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000581.1 845760 R 354242 CDS YP_001000582.1 121613012 4683511 846895..847365 1 NC_008787.1 hypothetical protein 847365 4683511 CJJ81176_0916 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000582.1 846895 D 354242 CDS YP_001000583.1 121613127 4683282 847451..847870 1 NC_008787.1 identified by match to protein family HMM PF04314; hypothetical protein 847870 4683282 CJJ81176_0917 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000583.1 847451 D 354242 CDS YP_001000584.1 121613628 4683146 847874..848326 1 NC_008787.1 hypothetical protein 848326 4683146 CJJ81176_0918 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000584.1 847874 D 354242 CDS YP_001000585.1 121613334 4683376 848323..848883 1 NC_008787.1 identified by match to protein family HMM PF02630; SCO1/SenC family protein 848883 4683376 CJJ81176_0919 Campylobacter jejuni subsp. jejuni 81-176 SCO1/SenC family protein YP_001000585.1 848323 D 354242 CDS YP_001000586.1 121612155 4682894 complement(848890..849651) 1 NC_008787.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 849651 cysK 4682894 cysK Campylobacter jejuni subsp. jejuni 81-176 cysteine synthase A YP_001000586.1 848890 R 354242 CDS YP_001000587.1 121613433 4682511 complement(849914..850210) 1 NC_008787.1 identified by match to protein family HMM PF00216; DNA-binding protein HU 850210 hup 4682511 hup Campylobacter jejuni subsp. jejuni 81-176 DNA-binding protein HU YP_001000587.1 849914 R 354242 CDS YP_001000588.1 121612338 4682759 complement(850312..852144) 1 NC_008787.1 invasion antigen B 852144 ciaB 4682759 ciaB Campylobacter jejuni subsp. jejuni 81-176 invasion antigen B YP_001000588.1 850312 R 354242 CDS YP_001000589.1 121613649 4682335 852206..852619 1 NC_008787.1 identified by match to protein family HMM PF03061; thioesterase family protein 852619 4682335 CJJ81176_0922 Campylobacter jejuni subsp. jejuni 81-176 thioesterase family protein YP_001000589.1 852206 D 354242 CDS YP_001000590.1 121612197 4682648 complement(852659..852859) 1 NC_008787.1 identified by match to protein family HMM PF04328; hypothetical protein 852859 4682648 CJJ81176_0923 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000590.1 852659 R 354242 CDS YP_001000591.1 121613419 4682638 complement(852837..854948) 1 NC_008787.1 identified by match to protein family HMM PF02554; carbon starvation protein A 854948 cstA 4682638 cstA Campylobacter jejuni subsp. jejuni 81-176 carbon starvation protein A YP_001000591.1 852837 R 354242 CDS YP_001000592.1 121612719 4682768 complement(855115..856044) 1 NC_008787.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 856044 prsA 4682768 prsA Campylobacter jejuni subsp. jejuni 81-176 ribose-phosphate pyrophosphokinase YP_001000592.1 855115 R 354242 CDS YP_001000593.1 121613743 4683648 complement(856152..856811) 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, permease protein PEB1 856811 4683648 CJJ81176_0926 Campylobacter jejuni subsp. jejuni 81-176 amino acid ABC transporter, permease protein PEB1 YP_001000593.1 856152 R 354242 CDS YP_001000594.1 121612211 4683249 complement(856822..857574) 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter, permease protein PEB1 857574 4683249 CJJ81176_0927 Campylobacter jejuni subsp. jejuni 81-176 amino acid ABC transporter, permease protein PEB1 YP_001000594.1 856822 R 354242 CDS YP_001000595.1 121613532 4682602 complement(857576..858355) 1 NC_008787.1 PEB1; bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein 858355 pebA 4682602 pebA Campylobacter jejuni subsp. jejuni 81-176 bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein YP_001000595.1 857576 R 354242 CDS YP_001000596.1 121612723 4682094 complement(858377..859105) 1 NC_008787.1 identified by match to protein family HMM PF00005; amino acid ABC transporter, ATP-binding protein PEB1 859105 pebC 4682094 pebC Campylobacter jejuni subsp. jejuni 81-176 amino acid ABC transporter, ATP-binding protein PEB1 YP_001000596.1 858377 R 354242 CDS YP_001000597.1 121612593 4683646 complement(859241..860029) 1 NC_008787.1 identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein methyltransferase CheR 860029 cheR 4683646 cheR Campylobacter jejuni subsp. jejuni 81-176 chemotaxis protein methyltransferase CheR YP_001000597.1 859241 R 354242 CDS YP_001000598.1 121613513 4682501 complement(860045..860599) 1 NC_008787.1 identified by match to protein family HMM PF01339; protein-glutamate methylesterase CheB 860599 cheB 4682501 cheB Campylobacter jejuni subsp. jejuni 81-176 protein-glutamate methylesterase CheB YP_001000598.1 860045 R 354242 CDS YP_001000599.1 121613326 4683751 860765..861202 1 NC_008787.1 identified by match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B 861202 rpiB 4683751 rpiB Campylobacter jejuni subsp. jejuni 81-176 ribose 5-phosphate isomerase B YP_001000599.1 860765 D 354242 CDS YP_001000600.1 121612643 4682902 861202..861534 1 NC_008787.1 hypothetical protein 861534 4682902 CJJ81176_1732 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000600.1 861202 D 354242 CDS YP_001000601.1 121613579 4683739 861531..862079 1 NC_008787.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 862079 apt 4683739 apt Campylobacter jejuni subsp. jejuni 81-176 adenine phosphoribosyltransferase YP_001000601.1 861531 D 354242 CDS YP_001000602.1 121612853 4683102 862098..862694 1 NC_008787.1 DedA family protein 862694 4683102 CJJ81176_0935 Campylobacter jejuni subsp. jejuni 81-176 DedA family protein YP_001000602.1 862098 D 354242 CDS YP_001000603.1 121612859 4683483 862691..864142 1 NC_008787.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 864142 4683483 CJJ81176_0936 Campylobacter jejuni subsp. jejuni 81-176 leucyl aminopeptidase YP_001000603.1 862691 D 354242 CDS YP_001000604.1 121612151 4683473 864139..865242 1 NC_008787.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 865242 4683473 CJJ81176_0937 Campylobacter jejuni subsp. jejuni 81-176 GTP-dependent nucleic acid-binding protein EngD YP_001000604.1 864139 D 354242 CDS YP_001000605.1 121613058 4682580 complement(865264..866646) 1 NC_008787.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 866646 argH 4682580 argH Campylobacter jejuni subsp. jejuni 81-176 argininosuccinate lyase YP_001000605.1 865264 R 354242 CDS YP_001000606.1 121612404 4683218 complement(866656..868230) 1 NC_008787.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 868230 pckA 4683218 pckA Campylobacter jejuni subsp. jejuni 81-176 phosphoenolpyruvate carboxykinase YP_001000606.1 866656 R 354242 CDS YP_001000607.1 121612122 4682246 complement(868243..870042) 1 NC_008787.1 identified by match to protein family HMM PF00364; match to protein family HMM PF00682; oxaloacetate decarboxylase, alpha subunit, putative 870042 4682246 CJJ81176_0940 Campylobacter jejuni subsp. jejuni 81-176 oxaloacetate decarboxylase, alpha subunit, putative YP_001000607.1 868243 R 354242 CDS YP_001000608.1 121613138 4682453 complement(870075..871415) 1 NC_008787.1 identified by match to protein family HMM PF00209; sodium transporter, putative 871415 4682453 CJJ81176_0941 Campylobacter jejuni subsp. jejuni 81-176 sodium transporter, putative YP_001000608.1 870075 R 354242 CDS YP_001000609.1 121612501 4683129 complement(871428..872762) 1 NC_008787.1 identified by match to protein family HMM PF00209; sodium transporter, putative 872762 4683129 CJJ81176_0942 Campylobacter jejuni subsp. jejuni 81-176 sodium transporter, putative YP_001000609.1 871428 R 354242 CDS YP_001000610.1 121613349 4683587 872996..873334 1 NC_008787.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 873334 atpE 4683587 atpE Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit C YP_001000610.1 872996 D 354242 CDS YP_001000611.1 121612394 4682676 874059..874214 1 NC_008787.1 hypothetical protein 874214 4682676 CJJ81176_0945 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000611.1 874059 D 354242 CDS YP_001000612.1 121613111 4682248 874531..874758 1 NC_008787.1 hypothetical protein 874758 4682248 CJJ81176_0946 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000612.1 874531 D 354242 CDS YP_001000613.1 121613014 4683162 874762..875121 1 NC_008787.1 identified by match to protein family HMM PF03681; hypothetical protein 875121 4683162 CJJ81176_0947 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000613.1 874762 D 354242 CDS YP_001000614.1 121612911 4683276 complement(875453..875584) 1 NC_008787.1 hypothetical protein 875584 4683276 CJJ81176_0948 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000614.1 875453 R 354242 CDS YP_001000615.1 121613652 4683413 complement(875589..876473) 1 NC_008787.1 hypothetical protein 876473 4683413 CJJ81176_0949 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000615.1 875589 R 354242 CDS YP_001000616.1 121612701 4682842 complement(876487..877011) 1 NC_008787.1 hypothetical protein 877011 4682842 CJJ81176_0950 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000616.1 876487 R 354242 CDS YP_001000617.1 121612988 4683660 complement(877026..877148) 1 NC_008787.1 hypothetical protein 877148 4683660 CJJ81176_0951 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000617.1 877026 R 354242 CDS YP_001000618.1 121612512 4683294 complement(877197..878312) 1 NC_008787.1 hypothetical protein 878312 4683294 CJJ81176_0952 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000618.1 877197 R 354242 CDS YP_001000619.1 121613244 4683456 complement(878596..879048) 1 NC_008787.1 hypothetical protein 879048 4683456 CJJ81176_0953 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000619.1 878596 R 354242 CDS YP_001000620.1 121613139 4683010 879618..880529 1 NC_008787.1 identified by match to protein family HMM PF03547; hypothetical protein 880529 4683010 CJJ81176_0954 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000620.1 879618 D 354242 CDS YP_001000621.1 121612254 4683130 complement(880537..884049) 1 NC_008787.1 identified by match to protein family HMM PF00501; match to protein family HMM PF01553; match to protein family HMM PF07690; 2-acyl-glycerophospho-ethanolamine acyltransferase 884049 aas 4683130 aas Campylobacter jejuni subsp. jejuni 81-176 2-acyl-glycerophospho-ethanolamine acyltransferase YP_001000621.1 880537 R 354242 CDS YP_001000622.1 121613128 4682506 complement(884094..884474) 1 NC_008787.1 hypothetical protein 884474 4682506 CJJ81176_0956 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000622.1 884094 R 354242 CDS YP_001000623.1 121612505 4682585 complement(885274..886059) 1 NC_008787.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 886059 4682585 CJJ81176_0964 Campylobacter jejuni subsp. jejuni 81-176 His/Glu/Gln/Arg/opine ABC transporter permease YP_001000623.1 885274 R 354242 CDS YP_001000624.1 121613149 4683545 complement(886082..887287) 1 NC_008787.1 identified by match to protein family HMM PF02687; permease, putative 887287 4683545 CJJ81176_0965 Campylobacter jejuni subsp. jejuni 81-176 permease, putative YP_001000624.1 886082 R 354242 CDS YP_001000625.1 121612268 4683120 complement(887284..889872) 1 NC_008787.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 889872 secA 4683120 secA Campylobacter jejuni subsp. jejuni 81-176 preprotein translocase subunit SecA YP_001000625.1 887284 R 354242 CDS YP_001000626.1 121612737 4682479 889987..890481 1 NC_008787.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 890481 lolA 4682479 lolA Campylobacter jejuni subsp. jejuni 81-176 outer-membrane lipoprotein carrier protein YP_001000626.1 889987 D 354242 CDS YP_001000627.1 121613340 4683617 complement(890478..891212) 1 NC_008787.1 hypothetical protein 891212 4683617 CJJ81176_0968 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000627.1 890478 R 354242 CDS YP_001000628.1 121612263 4682886 complement(891222..892565) 1 NC_008787.1 hypothetical protein 892565 4682886 CJJ81176_0969 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000628.1 891222 R 354242 CDS YP_001000629.1 121612546 4682494 892614..893960 1 NC_008787.1 putative lipoprotein 893960 4682494 CJJ81176_0970 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000629.1 892614 D 354242 CDS YP_001000630.1 121612447 4683089 complement(893972..894844) 1 NC_008787.1 identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase 894844 4683089 CJJ81176_0971 Campylobacter jejuni subsp. jejuni 81-176 carbon-nitrogen family hydrolase YP_001000630.1 893972 R 354242 CDS YP_001000631.1 121612674 4682170 complement(894841..895728) 1 NC_008787.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 895728 4682170 CJJ81176_0972 Campylobacter jejuni subsp. jejuni 81-176 cation efflux family protein YP_001000631.1 894841 R 354242 CDS YP_001000632.1 121612399 4683686 complement(895725..896702) 1 NC_008787.1 identified by match to protein family HMM PF04371; peptidyl-arginine deiminase family protein 896702 4683686 CJJ81176_0973 Campylobacter jejuni subsp. jejuni 81-176 peptidyl-arginine deiminase family protein YP_001000632.1 895725 R 354242 CDS YP_001000633.1 121612285 4682251 complement(896801..897235) 1 NC_008787.1 identified by match to protein family HMM PF03724; putative lipoprotein 897235 4682251 CJJ81176_0974 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000633.1 896801 R 354242 CDS YP_001000634.1 121612989 4682452 complement(897245..898837) 1 NC_008787.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; membrane protein, putative, degenerate 898837 4682452 CJJ81176_0975 Campylobacter jejuni subsp. jejuni 81-176 membrane protein, putative, degenerate YP_001000634.1 897245 R 354242 CDS YP_001000635.1 121613431 4683295 complement(898936..900468) 1 NC_008787.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 900468 purH 4683295 purH Campylobacter jejuni subsp. jejuni 81-176 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001000635.1 898936 R 354242 CDS YP_001000636.1 121612916 4682802 complement(900471..901109) 1 NC_008787.1 identified by match to protein family HMM PF00226; DnaJ domain-containing protein 901109 4682802 CJJ81176_0977 Campylobacter jejuni subsp. jejuni 81-176 DnaJ domain-containing protein YP_001000636.1 900471 R 354242 CDS YP_001000637.1 121613184 4683454 complement(901238..903424) 1 NC_008787.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 903424 purL 4683454 purL Campylobacter jejuni subsp. jejuni 81-176 phosphoribosylformylglycinamidine synthase II YP_001000637.1 901238 R 354242 CDS YP_001000638.1 121612630 4683065 complement(903435..904763) 1 NC_008787.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 904763 trmE 4683065 trmE Campylobacter jejuni subsp. jejuni 81-176 tRNA modification GTPase TrmE YP_001000638.1 903435 R 354242 CDS YP_001000639.1 121612959 4683752 complement(904756..905574) 1 NC_008787.1 hypothetical protein 905574 4683752 CJJ81176_0980 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000639.1 904756 R 354242 CDS YP_001000640.1 121613009 4683339 complement(905578..907164) 1 NC_008787.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 907164 4683339 CJJ81176_0981 Campylobacter jejuni subsp. jejuni 81-176 putative inner membrane protein translocase component YidC YP_001000640.1 905578 R 354242 CDS YP_001000641.1 121612282 4683327 complement(907161..907502) 1 NC_008787.1 identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 907502 4683327 CJJ81176_0982 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000641.1 907161 R 354242 CDS YP_001000642.1 121613177 4682455 complement(907499..907825) 1 NC_008787.1 identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 907825 rnpA 4682455 rnpA Campylobacter jejuni subsp. jejuni 81-176 ribonuclease P protein component YP_001000642.1 907499 R 354242 CDS YP_001000643.1 121612388 4683082 complement(907822..907956) 1 NC_008787.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 907956 rpmH 4683082 rpmH Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L34 YP_001000643.1 907822 R 354242 CDS YP_001000644.1 121613489 4682259 908087..908566 1 NC_008787.1 identified by match to protein family HMM PF00583; acetyltransferase 908566 4682259 CJJ81176_0985 Campylobacter jejuni subsp. jejuni 81-176 acetyltransferase YP_001000644.1 908087 D 354242 CDS YP_001000645.1 121612802 4682717 908593..909171 1 NC_008787.1 hypothetical protein 909171 4682717 CJJ81176_0986 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000645.1 908593 D 354242 CDS YP_001000646.1 121612773 4683538 909207..910358 1 NC_008787.1 hypothetical protein 910358 4683538 CJJ81176_0987 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000646.1 909207 D 354242 CDS YP_001000647.1 121613585 4683573 complement(910350..910724) 1 NC_008787.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; thioesterase family protein 910724 4683573 CJJ81176_0988 Campylobacter jejuni subsp. jejuni 81-176 thioesterase family protein YP_001000647.1 910350 R 354242 CDS YP_001000648.1 121613369 4683104 911259..911441 1 NC_008787.1 putative periplasmic protein 911441 4683104 CJJ81176_0990 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000648.1 911259 D 354242 CDS YP_001000649.1 121612986 4682849 911443..911598 1 NC_008787.1 putative periplasmic protein 911598 4682849 CJJ81176_0991 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000649.1 911443 D 354242 CDS YP_001000650.1 121612416 4683304 911595..912038 1 NC_008787.1 putative periplasmic protein 912038 4683304 CJJ81176_0992 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000650.1 911595 D 354242 CDS YP_001000651.1 121612554 4682208 912068..912184 1 NC_008787.1 putative periplasmic protein 912184 4682208 CJJ81176_0993 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000651.1 912068 D 354242 CDS YP_001000652.1 121613499 4683008 912229..913098 1 NC_008787.1 putative periplasmic protein 913098 4683008 CJJ81176_1741 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000652.1 912229 D 354242 CDS YP_001000653.1 121613527 4682704 913484..913612 1 NC_008787.1 hypothetical protein 913612 4682704 CJJ81176_1742 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000653.1 913484 D 354242 CDS YP_001000654.1 121612569 4682089 913709..915370 1 NC_008787.1 identified by match to protein family HMM PF05860; match to protein family HMM TIGR01901; putative periplasmic protein 915370 4682089 CJJ81176_1743 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000654.1 913709 D 354242 CDS YP_001000655.1 121612465 4682812 915632..917287 1 NC_008787.1 identified by match to protein family HMM PF01103; match to protein family HMM PF08479; hypothetical protein 917287 4682812 CJJ81176_1744 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000655.1 915632 D 354242 CDS YP_001000656.1 121613156 4682516 917398..918273 1 NC_008787.1 identified by match to protein family HMM PF08003; methyltransferase, putative 918273 4682516 CJJ81176_0995 Campylobacter jejuni subsp. jejuni 81-176 methyltransferase, putative YP_001000656.1 917398 D 354242 CDS YP_001000657.1 121613158 4683087 918346..918924 1 NC_008787.1 hypothetical protein 918924 4683087 CJJ81176_0996 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000657.1 918346 D 354242 CDS YP_001000658.1 121612459 4683358 complement(918925..919098) 1 NC_008787.1 putative lipoprotein 919098 4683358 CJJ81176_0997 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000658.1 918925 R 354242 CDS YP_001000659.1 121612563 4682152 complement(919107..919634) 1 NC_008787.1 identified by match to protein family HMM PF00565; thermonuclease family protein 919634 4682152 CJJ81176_0998 Campylobacter jejuni subsp. jejuni 81-176 thermonuclease family protein YP_001000659.1 919107 R 354242 CDS YP_001000660.1 121612789 4682917 919702..920970 1 NC_008787.1 aminoacyl-histidine dipeptidase 920970 pepD 4682917 pepD Campylobacter jejuni subsp. jejuni 81-176 aminoacyl-histidine dipeptidase YP_001000660.1 919702 D 354242 CDS YP_001000661.1 121612328 4683565 complement(920953..922200) 1 NC_008787.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; CjaB protein 922200 cjaB 4683565 cjaB Campylobacter jejuni subsp. jejuni 81-176 CjaB protein YP_001000661.1 920953 R 354242 CDS YP_001000662.1 121612178 4682355 complement(922240..923079) 1 NC_008787.1 identified by match to protein family HMM PF00497; CjaA protein 923079 cjaA 4682355 cjaA Campylobacter jejuni subsp. jejuni 81-176 CjaA protein YP_001000662.1 922240 R 354242 CDS YP_001000663.1 121613448 4682683 923299..924417 1 NC_008787.1 surface-exposed lipoprotein 924417 jlpA 4682683 jlpA Campylobacter jejuni subsp. jejuni 81-176 surface-exposed lipoprotein YP_001000663.1 923299 D 354242 CDS YP_001000664.1 121612487 4682736 924509..925249 1 NC_008787.1 identified by match to protein family HMM PF03883; hypothetical protein 925249 4682736 CJJ81176_1003 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000664.1 924509 D 354242 CDS YP_001000665.1 121613231 4683713 complement(925253..926404) 1 NC_008787.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; hippurate hydrolase 926404 hipO 4683713 hipO Campylobacter jejuni subsp. jejuni 81-176 hippurate hydrolase YP_001000665.1 925253 R 354242 CDS YP_001000666.1 121612112 4683019 complement(926406..926981) 1 NC_008787.1 hypothetical protein 926981 4683019 CJJ81176_1005 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000666.1 926406 R 354242 CDS YP_001000667.1 121612134 4682398 complement(927215..927625) 1 NC_008787.1 hypothetical protein 927625 4682398 CJJ81176_1006 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000667.1 927215 R 354242 CDS YP_001000668.1 121612910 4682498 927859..928065 1 NC_008787.1 hypothetical protein 928065 4682498 CJJ81176_1007 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000668.1 927859 D 354242 CDS YP_001000669.1 121613647 4683412 complement(928068..928829) 1 NC_008787.1 hypothetical protein 928829 4683412 CJJ81176_1008 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000669.1 928068 R 354242 CDS YP_001000670.1 121612950 4682130 complement(928826..930091) 1 NC_008787.1 identified by match to protein family HMM PF00037; match to protein family HMM PF02754; iron-sulfur cluster-binding domain-containing protein 930091 4682130 CJJ81176_1009 Campylobacter jejuni subsp. jejuni 81-176 iron-sulfur cluster-binding domain-containing protein YP_001000670.1 928826 R 354242 CDS YP_001000671.1 121612219 4683348 complement(930093..931448) 1 NC_008787.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 931448 hemN 4683348 hemN Campylobacter jejuni subsp. jejuni 81-176 coproporphyrinogen III oxidase YP_001000671.1 930093 R 354242 CDS YP_001000672.1 121612360 4682582 complement(931435..931926) 1 NC_008787.1 hypothetical protein 931926 4682582 CJJ81176_1011 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000672.1 931435 R 354242 CDS YP_001000673.1 121613304 4682304 complement(931923..932843) 1 NC_008787.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 932843 argF 4682304 argF Campylobacter jejuni subsp. jejuni 81-176 ornithine carbamoyltransferase YP_001000673.1 931923 R 354242 CDS YP_001000674.1 121613545 4682926 complement(932840..933823) 1 NC_008787.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 933823 hemB 4682926 hemB Campylobacter jejuni subsp. jejuni 81-176 delta-aminolevulinic acid dehydratase YP_001000674.1 932840 R 354242 CDS YP_001000675.1 121612797 4682525 933881..934441 1 NC_008787.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 934441 ribA 4682525 ribA Campylobacter jejuni subsp. jejuni 81-176 GTP cyclohydrolase II YP_001000675.1 933881 D 354242 CDS YP_001000676.1 121612782 4683557 934442..935008 1 NC_008787.1 identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; methyltransferase GidB 935008 gidB 4683557 gidB Campylobacter jejuni subsp. jejuni 81-176 methyltransferase GidB YP_001000676.1 934442 D 354242 CDS YP_001000677.1 121613736 4683562 complement(935024..935596) 1 NC_008787.1 hypothetical protein 935596 4683562 CJJ81176_1016 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000677.1 935024 R 354242 CDS YP_001000678.1 121612158 4682407 complement(935691..936788) 1 NC_008787.1 identified by match to protein family HMM PF03601; hypothetical protein 936788 4682407 CJJ81176_1017 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000678.1 935691 R 354242 CDS YP_001000679.1 121613078 4682616 936901..937782 1 NC_008787.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 937782 4682616 CJJ81176_1018 Campylobacter jejuni subsp. jejuni 81-176 LysR family transcriptional regulator YP_001000679.1 936901 D 354242 CDS YP_001000680.1 121612947 4683196 937862..939730 1 NC_008787.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 939730 rpoD 4683196 rpoD Campylobacter jejuni subsp. jejuni 81-176 RNA polymerase sigma factor RpoD YP_001000680.1 937862 D 354242 CDS YP_001000681.1 121612727 4683353 complement(939745..940257) 1 NC_008787.1 identified by match to protein family HMM PF00300; phosphohistidine phosphatase SixA 940257 sixA 4683353 sixA Campylobacter jejuni subsp. jejuni 81-176 phosphohistidine phosphatase SixA YP_001000681.1 939745 R 354242 CDS YP_001000682.1 121613089 4683636 complement(940254..940772) 1 NC_008787.1 identified by match to protein family HMM PF01694; rhomboid family protein 940772 4683636 CJJ81176_1021 Campylobacter jejuni subsp. jejuni 81-176 rhomboid family protein YP_001000682.1 940254 R 354242 CDS YP_001000683.1 121612215 4683178 940870..941286 1 NC_008787.1 hypothetical protein 941286 4683178 CJJ81176_1022 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000683.1 940870 D 354242 CDS YP_001000684.1 121612530 4682604 complement(941294..942910) 1 NC_008787.1 identified by match to protein family HMM PF00004; match to protein family HMM PF06480; cell division protein FtsH, putative 942910 4682604 CJJ81176_1023 Campylobacter jejuni subsp. jejuni 81-176 cell division protein FtsH, putative YP_001000684.1 941294 R 354242 CDS YP_001000685.1 121612428 4683280 complement(942914..944164) 1 NC_008787.1 identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; MiaB-like tRNA modifying enzyme 944164 4683280 CJJ81176_1024 Campylobacter jejuni subsp. jejuni 81-176 MiaB-like tRNA modifying enzyme YP_001000685.1 942914 R 354242 CDS YP_001000686.1 121612739 4682204 complement(944161..945732) 1 NC_008787.1 identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein 945732 4682204 CJJ81176_1025 Campylobacter jejuni subsp. jejuni 81-176 mechanosensitive ion channel family protein YP_001000686.1 944161 R 354242 CDS YP_001000687.1 121613531 4683613 complement(945729..946784) 1 NC_008787.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 946784 aroB 4683613 aroB Campylobacter jejuni subsp. jejuni 81-176 3-dehydroquinate synthase YP_001000687.1 945729 R 354242 CDS YP_001000688.1 121612157 4682097 complement(946830..948230) 1 NC_008787.1 identified by match to protein family HMM PF02080; TrkA domain-containing protein 948230 4682097 CJJ81176_1027 Campylobacter jejuni subsp. jejuni 81-176 TrkA domain-containing protein YP_001000688.1 946830 R 354242 CDS YP_001000689.1 121613106 4682611 948260..949381 1 NC_008787.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 949381 tgt 4682611 tgt Campylobacter jejuni subsp. jejuni 81-176 queuine tRNA-ribosyltransferase YP_001000689.1 948260 D 354242 CDS YP_001000690.1 121613520 4683155 949383..950150 1 NC_008787.1 hypothetical protein 950150 4683155 CJJ81176_1029 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000690.1 949383 D 354242 CDS YP_001000691.1 121612801 4682661 complement(950282..950746) 1 NC_008787.1 hypothetical protein 950746 4682661 CJJ81176_1031 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000691.1 950282 R 354242 CDS YP_001000692.1 121612570 4683536 complement(950747..953992) 1 NC_008787.1 identified by match to protein family HMM PF01578; CcmF/CcyK/CcsA family cytochrome c biogenesis protein 953992 4683536 CJJ81176_1032 Campylobacter jejuni subsp. jejuni 81-176 CcmF/CcyK/CcsA family cytochrome c biogenesis protein YP_001000692.1 950747 R 354242 CDS YP_001000693.1 121613528 4682824 complement(954010..954708) 1 NC_008787.1 identified by match to protein family HMM PF00005; high affinity branched-chain amino acid ABC transporter, ATP-binding protein 954708 livF 4682824 livF Campylobacter jejuni subsp. jejuni 81-176 high affinity branched-chain amino acid ABC transporter, ATP-binding protein YP_001000693.1 954010 R 354242 CDS YP_001000694.1 121613505 4682098 complement(954692..955462) 1 NC_008787.1 identified by match to protein family HMM PF00005; high affinity branched-chain amino acid ABC transporter, ATP-binding protein 955462 livG 4682098 livG Campylobacter jejuni subsp. jejuni 81-176 high affinity branched-chain amino acid ABC transporter, ATP-binding protein YP_001000694.1 954692 R 354242 CDS YP_001000695.1 121612562 4682686 complement(955459..956511) 1 NC_008787.1 identified by match to protein family HMM PF02653; high affinity branched-chain amino acid ABC transporter, permease protein 956511 livM 4682686 livM Campylobacter jejuni subsp. jejuni 81-176 high affinity branched-chain amino acid ABC transporter, permease protein YP_001000695.1 955459 R 354242 CDS YP_001000696.1 121613045 4682916 complement(956511..957407) 1 NC_008787.1 identified by match to protein family HMM PF02653; high affinity branched-chain amino acid ABC transporter, permease protein 957407 livH 4682916 livH Campylobacter jejuni subsp. jejuni 81-176 high affinity branched-chain amino acid ABC transporter, permease protein YP_001000696.1 956511 R 354242 CDS YP_001000697.1 121612325 4683237 complement(957426..958535) 1 NC_008787.1 identified by match to protein family HMM PF01094; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 958535 4683237 CJJ81176_1037 Campylobacter jejuni subsp. jejuni 81-176 high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein YP_001000697.1 957426 R 354242 CDS YP_001000698.1 121612759 4682367 complement(958557..959672) 1 NC_008787.1 identified by match to protein family HMM PF01094; high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 959672 4682367 CJJ81176_1038 Campylobacter jejuni subsp. jejuni 81-176 high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein YP_001000698.1 958557 R 354242 CDS YP_001000699.1 121613676 4683593 complement(959703..960137) 1 NC_008787.1 cytochrome c family protein 960137 4683593 CJJ81176_1039 Campylobacter jejuni subsp. jejuni 81-176 cytochrome c family protein YP_001000699.1 959703 R 354242 CDS YP_001000700.1 121612171 4683230 complement(960146..960337) 1 NC_008787.1 porin domain-containing protein 960337 4683230 CJJ81176_1040 Campylobacter jejuni subsp. jejuni 81-176 porin domain-containing protein YP_001000700.1 960146 R 354242 CDS YP_001000701.1 121613086 4682656 complement(960389..960895) 1 NC_008787.1 identified by match to protein family HMM PF03350; hypothetical protein 960895 4682656 CJJ81176_1041 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000701.1 960389 R 354242 CDS YP_001000702.1 121612603 4683186 complement(960904..961935) 1 NC_008787.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 961935 asd 4683186 asd Campylobacter jejuni subsp. jejuni 81-176 aspartate-semialdehyde dehydrogenase YP_001000702.1 960904 R 354242 CDS YP_001000703.1 121613540 4682421 complement(961935..963236) 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent DNA-binding response regulator 963236 4682421 CJJ81176_1043 Campylobacter jejuni subsp. jejuni 81-176 sigma-54 dependent DNA-binding response regulator YP_001000703.1 961935 R 354242 CDS YP_001000704.1 121612838 4682102 complement(963293..963610) 1 NC_008787.1 hypothetical protein 963610 4682102 CJJ81176_1044 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000704.1 963293 R 354242 CDS YP_001000705.1 121612133 4683488 complement(963718..964233) 1 NC_008787.1 identified by match to protein family HMM PF04164; putative lipoprotein 964233 4683488 CJJ81176_1045 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000705.1 963718 R 354242 CDS YP_001000706.1 121613117 4682497 complement(964302..966890) 1 NC_008787.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 966890 gyrA 4682497 gyrA Campylobacter jejuni subsp. jejuni 81-176 DNA gyrase subunit A YP_001000706.1 964302 R 354242 CDS YP_001000707.1 121612312 4683148 complement(966931..967506) 1 NC_008787.1 transformation system protein 967506 ctsW 4683148 ctsW Campylobacter jejuni subsp. jejuni 81-176 transformation system protein YP_001000707.1 966931 R 354242 CDS YP_001000708.1 121613247 4682391 complement(967503..968147) 1 NC_008787.1 outer membrane liproprotein MapA 968147 mapA 4682391 mapA Campylobacter jejuni subsp. jejuni 81-176 outer membrane liproprotein MapA YP_001000708.1 967503 R 354242 CDS YP_001000709.1 121612549 4682997 complement(968224..970020) 1 NC_008787.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 970020 lepA 4682997 lepA Campylobacter jejuni subsp. jejuni 81-176 GTP-binding protein LepA YP_001000709.1 968224 R 354242 CDS YP_001000710.1 121612864 4683025 970146..971420 1 NC_008787.1 identified by match to protein family HMM PF02321; hypothetical protein 971420 4683025 CJJ81176_1050 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000710.1 970146 D 354242 CDS YP_001000711.1 121613587 4683462 971417..972157 1 NC_008787.1 hypothetical protein 972157 4683462 CJJ81176_1051 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000711.1 971417 D 354242 CDS YP_001000712.1 121613194 4683100 972160..975177 1 NC_008787.1 identified by match to protein family HMM PF00873; AcrB/AcrD/AcrF family protein 975177 4683100 CJJ81176_1052 Campylobacter jejuni subsp. jejuni 81-176 AcrB/AcrD/AcrF family protein YP_001000712.1 972160 D 354242 CDS YP_001000713.1 121612561 4683059 complement(975202..976008) 1 NC_008787.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 976008 4683059 CJJ81176_1053 Campylobacter jejuni subsp. jejuni 81-176 adenylosuccinate lyase YP_001000713.1 975202 R 354242 CDS YP_001000714.1 121613462 4682899 complement(976009..976728) 1 NC_008787.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 976728 4682899 CJJ81176_1054 Campylobacter jejuni subsp. jejuni 81-176 arginyl-tRNA-protein transferase YP_001000714.1 976009 R 354242 CDS YP_001000715.1 121612736 4682718 complement(976728..976979) 1 NC_008787.1 hypothetical protein 976979 4682718 CJJ81176_1055 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000715.1 976728 R 354242 CDS YP_001000716.1 121613650 4683616 complement(976983..978428) 1 NC_008787.1 biotin carboxylase; catalyses the carboxylation of the carrier protein which then transfers the carboxyl group to form malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase subunit A 978428 accC-1 4683616 accC-1 Campylobacter jejuni subsp. jejuni 81-176 acetyl-CoA carboxylase subunit A YP_001000716.1 976983 R 354242 CDS YP_001000717.1 121612876 4682858 978568..979731 1 NC_008787.1 identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell cycle protein FtsW 979731 4682858 CJJ81176_1057 Campylobacter jejuni subsp. jejuni 81-176 cell cycle protein FtsW YP_001000717.1 978568 D 354242 CDS YP_001000718.1 121613146 4683450 979728..980756 1 NC_008787.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 980756 murG 4683450 murG Campylobacter jejuni subsp. jejuni 81-176 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001000718.1 979728 D 354242 CDS YP_001000719.1 121612194 4683121 complement(980727..981059) 1 NC_008787.1 hypothetical protein 981059 4683121 CJJ81176_1059 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000719.1 980727 R 354242 CDS YP_001000720.1 121613013 4682641 complement(981022..981351) 1 NC_008787.1 putative transmembrane transport protein 981351 4682641 CJJ81176_1060 Campylobacter jejuni subsp. jejuni 81-176 putative transmembrane transport protein YP_001000720.1 981022 R 354242 CDS YP_001000721.1 121612310 4683283 complement(981329..981808) 1 NC_008787.1 putative transmembrane transport protein 981808 4683283 CJJ81176_1061 Campylobacter jejuni subsp. jejuni 81-176 putative transmembrane transport protein YP_001000721.1 981329 R 354242 CDS YP_001000722.1 121613726 4682393 complement(981892..982743) 1 NC_008787.1 hypothetical protein 982743 4682393 CJJ81176_1062 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000722.1 981892 R 354242 CDS YP_001000723.1 121612987 4682928 complement(982806..983696) 1 NC_008787.1 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 983696 4682928 CJJ81176_1063 Campylobacter jejuni subsp. jejuni 81-176 AraC family transcriptional regulator YP_001000723.1 982806 R 354242 CDS YP_001000724.1 121613518 4683305 complement(983693..984298) 1 NC_008787.1 identified by match to protein family HMM PF02581; thiamine-phosphate pyrophosphorylase, putative 984298 4683305 CJJ81176_1064 Campylobacter jejuni subsp. jejuni 81-176 thiamine-phosphate pyrophosphorylase, putative YP_001000724.1 983693 R 354242 CDS YP_001000725.1 121612673 4682115 complement(984288..985433) 1 NC_008787.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 985433 thiH 4682115 thiH Campylobacter jejuni subsp. jejuni 81-176 thiamine biosynthesis protein ThiH YP_001000725.1 984288 R 354242 CDS YP_001000726.1 121613413 4683697 complement(985436..986212) 1 NC_008787.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 986212 thiG 4683697 thiG Campylobacter jejuni subsp. jejuni 81-176 thiazole synthase YP_001000726.1 985436 R 354242 CDS YP_001000727.1 121612454 4682804 complement(986215..987018) 1 NC_008787.1 catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF 987018 thiF 4682804 thiF Campylobacter jejuni subsp. jejuni 81-176 thiamine biosynthesis protein ThiF YP_001000727.1 986215 R 354242 CDS YP_001000728.1 121613665 4682158 complement(987015..987206) 1 NC_008787.1 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 987206 thiS 4682158 thiS Campylobacter jejuni subsp. jejuni 81-176 thiamine biosynthesis protein ThiS YP_001000728.1 987015 R 354242 CDS YP_001000729.1 121612679 4682211 complement(987216..988313) 1 NC_008787.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 988313 dapE 4682211 dapE Campylobacter jejuni subsp. jejuni 81-176 succinyl-diaminopimelate desuccinylase YP_001000729.1 987216 R 354242 CDS YP_001000730.1 121613345 4683691 complement(988317..988916) 1 NC_008787.1 identified by match to protein family HMM PF01810; amino acid transporter LysE 988916 4683691 CJJ81176_1070 Campylobacter jejuni subsp. jejuni 81-176 amino acid transporter LysE YP_001000730.1 988317 R 354242 CDS YP_001000731.1 121613447 4682883 complement(988909..989610) 1 NC_008787.1 identified by match to protein family HMM PF02146; NAD-dependent deacetylase 989610 4682883 CJJ81176_1071 Campylobacter jejuni subsp. jejuni 81-176 NAD-dependent deacetylase YP_001000731.1 988909 R 354242 CDS YP_001000732.1 121612653 4682751 complement(989607..991814) 1 NC_008787.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 991814 mutS 4682751 mutS Campylobacter jejuni subsp. jejuni 81-176 recombination and DNA strand exchange inhibitor protein YP_001000732.1 989607 R 354242 CDS YP_001000733.1 121613718 4683717 complement(991807..992157) 1 NC_008787.1 hypothetical protein 992157 4683717 CJJ81176_1073 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000733.1 991807 R 354242 CDS YP_001000734.1 121612221 4682545 complement(992150..993445) 1 NC_008787.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 993445 murC 4682545 murC Campylobacter jejuni subsp. jejuni 81-176 UDP-N-acetylmuramate--L-alanine ligase YP_001000734.1 992150 R 354242 CDS YP_001000735.1 121613023 4682599 complement(993512..995485) 1 NC_008787.1 identified by match to protein family HMM PF00884; putative integral membrane protein 995485 4682599 CJJ81176_1075 Campylobacter jejuni subsp. jejuni 81-176 putative integral membrane protein YP_001000735.1 993512 R 354242 CDS YP_001000736.1 121612517 4683313 complement(995497..996273) 1 NC_008787.1 carbon-nitrogen family hydrolase 996273 4683313 CJJ81176_1076 Campylobacter jejuni subsp. jejuni 81-176 carbon-nitrogen family hydrolase YP_001000736.1 995497 R 354242 CDS YP_001000737.1 121613254 4683409 complement(996266..996439) 1 NC_008787.1 exodeoxyribonuclease VII, small subunit, putative 996439 4683409 CJJ81176_1077 Campylobacter jejuni subsp. jejuni 81-176 exodeoxyribonuclease VII, small subunit, putative YP_001000737.1 996266 R 354242 CDS YP_001000738.1 121613583 4682988 complement(996436..997893) 1 NC_008787.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 997893 guaB 4682988 guaB Campylobacter jejuni subsp. jejuni 81-176 inosine 5'-monophosphate dehydrogenase YP_001000738.1 996436 R 354242 CDS YP_001000739.1 121612634 4683241 complement(997903..999264) 1 NC_008787.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 999264 gatA 4683241 gatA Campylobacter jejuni subsp. jejuni 81-176 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001000739.1 997903 R 354242 CDS YP_001000740.1 121612940 4683744 complement(999365..1002118) 1 NC_008787.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1002118 ileS 4683744 ileS Campylobacter jejuni subsp. jejuni 81-176 isoleucyl-tRNA synthetase YP_001000740.1 999365 R 354242 CDS YP_001000741.1 121612250 4683380 1002217..1003305 1 NC_008787.1 identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; competence/damage-inducible domain-containing protein 1003305 4683380 CJJ81176_1081 Campylobacter jejuni subsp. jejuni 81-176 competence/damage-inducible domain-containing protein YP_001000741.1 1002217 D 354242 CDS YP_001000742.1 121612697 4682783 1003317..1003742 1 NC_008787.1 identified by match to protein family HMM PF00583; acetyltransferase 1003742 4682783 CJJ81176_1082 Campylobacter jejuni subsp. jejuni 81-176 acetyltransferase YP_001000742.1 1003317 D 354242 CDS YP_001000743.1 121613422 4683662 1003806..1004426 1 NC_008787.1 identified by match to protein family HMM PF00881; nitroreducatase family protein, authentic frameshift 1004426 4683662 CJJ81176_1083 Campylobacter jejuni subsp. jejuni 81-176 nitroreducatase family protein, authentic frameshift YP_001000743.1 1003806 D 354242 CDS YP_001000744.1 121612908 4682807 1004426..1005031 1 NC_008787.1 identified by match to protein family HMM PF00881; nitroreductase family protein 1005031 4682807 CJJ81176_1084 Campylobacter jejuni subsp. jejuni 81-176 nitroreductase family protein YP_001000744.1 1004426 D 354242 CDS YP_001000745.1 121613620 4683404 1005156..1005692 1 NC_008787.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1005692 pgsA 4683404 pgsA Campylobacter jejuni subsp. jejuni 81-176 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001000745.1 1005156 D 354242 CDS YP_001000746.1 121612227 4683758 1005689..1006795 1 NC_008787.1 identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease, putative 1006795 4683758 CJJ81176_1086 Campylobacter jejuni subsp. jejuni 81-176 membrane-associated zinc metalloprotease, putative YP_001000746.1 1005689 D 354242 CDS YP_001000747.1 121613011 4682567 1006788..1007654 1 NC_008787.1 identified by match to protein family HMM PF04393; hypothetical protein 1007654 4682567 CJJ81176_1087 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000747.1 1006788 D 354242 CDS YP_001000748.1 121612432 4683275 1007741..1008118 1 NC_008787.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1008118 rpsF 4683275 rpsF Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S6 YP_001000748.1 1007741 D 354242 CDS YP_001000749.1 121613258 4682190 1008127..1008675 1 NC_008787.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1008675 ssb 4682190 ssb Campylobacter jejuni subsp. jejuni 81-176 single-stranded DNA-binding protein YP_001000749.1 1008127 D 354242 CDS YP_001000750.1 121613108 4682974 1008686..1008946 1 NC_008787.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1008946 rpsR 4682974 rpsR Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S18 YP_001000750.1 1008686 D 354242 CDS YP_001000751.1 121612165 4683167 complement(1009006..1011381) 1 NC_008787.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La 1011381 lon 4683167 lon Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent protease La YP_001000751.1 1009006 R 354242 CDS YP_001000752.1 121613300 4682640 complement(1011398..1012045) 1 NC_008787.1 putative lipoprotein 1012045 4682640 CJJ81176_1092 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000752.1 1011398 R 354242 CDS YP_001000753.1 121612373 4682932 1012206..1012595 1 NC_008787.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 1012595 4682932 CJJ81176_1093 Campylobacter jejuni subsp. jejuni 81-176 flagellar assembly protein FliW YP_001000753.1 1012206 D 354242 CDS YP_001000754.1 121612664 4682291 1012595..1013326 1 NC_008787.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 1013326 proC 4682291 proC Campylobacter jejuni subsp. jejuni 81-176 pyrroline-5-carboxylate reductase YP_001000754.1 1012595 D 354242 CDS YP_001000755.1 121613360 4683702 1013323..1013625 1 NC_008787.1 transformation system protein 1013625 ctsT 4683702 ctsT Campylobacter jejuni subsp. jejuni 81-176 transformation system protein YP_001000755.1 1013323 D 354242 CDS YP_001000756.1 121612857 4682860 1013622..1014284 1 NC_008787.1 hypothetical protein 1014284 4682860 CJJ81176_1096 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000756.1 1013622 D 354242 CDS YP_001000757.1 121612244 4683467 1014281..1014733 1 NC_008787.1 hypothetical protein 1014733 4683467 CJJ81176_1097 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000757.1 1014281 D 354242 CDS YP_001000758.1 121613591 4682537 complement(1014730..1015359) 1 NC_008787.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 1015359 hemD 4682537 hemD Campylobacter jejuni subsp. jejuni 81-176 uroporphyrinogen-III synthase YP_001000758.1 1014730 R 354242 CDS YP_001000759.1 121612993 4683371 complement(1015337..1015969) 1 NC_008787.1 identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate pyrophosphorylase 1015969 thiE 4683371 thiE Campylobacter jejuni subsp. jejuni 81-176 thiamine-phosphate pyrophosphorylase YP_001000759.1 1015337 R 354242 CDS YP_001000760.1 121612839 4683297 complement(1015959..1016771) 1 NC_008787.1 identified by match to protein family HMM PF01256; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 1016771 thiD 4683297 thiD Campylobacter jejuni subsp. jejuni 81-176 phosphomethylpyrimidine kinase YP_001000760.1 1015959 R 354242 CDS YP_001000761.1 121612421 4683489 complement(1016768..1017454) 1 NC_008787.1 identified by match to protein family HMM PF00730; endonuclease III, putative 1017454 4683489 CJJ81176_1101 Campylobacter jejuni subsp. jejuni 81-176 endonuclease III, putative YP_001000761.1 1016768 R 354242 CDS YP_001000762.1 121612637 4682221 complement(1017451..1018212) 1 NC_008787.1 identified by match to protein family HMM PF05673; hypothetical protein 1018212 4682221 CJJ81176_1102 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000762.1 1017451 R 354242 CDS YP_001000763.1 121613373 4683741 complement(1018214..1021150) 1 NC_008787.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor 1021150 mfd 4683741 mfd Campylobacter jejuni subsp. jejuni 81-176 transcription-repair coupling factor YP_001000763.1 1018214 R 354242 CDS YP_001000764.1 121612850 4682853 complement(1021150..1021545) 1 NC_008787.1 identified by match to protein family HMM PF04519; hypothetical protein 1021545 4682853 CJJ81176_1104 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000764.1 1021150 R 354242 CDS YP_001000765.1 121613614 4683470 complement(1021482..1022384) 1 NC_008787.1 identified by match to protein family HMM PF01551; M24/M37 family peptidase 1022384 4683470 CJJ81176_1105 Campylobacter jejuni subsp. jejuni 81-176 M24/M37 family peptidase YP_001000765.1 1021482 R 354242 CDS YP_001000766.1 121612183 4683764 complement(1022371..1023543) 1 NC_008787.1 identified by match to protein family HMM PF08245; match to protein family HMM TIGR01499; folC bifunctional protein 1023543 folC 4683764 folC Campylobacter jejuni subsp. jejuni 81-176 folC bifunctional protein YP_001000766.1 1022371 R 354242 CDS YP_001000767.1 121613187 4682671 complement(1023521..1024918) 1 NC_008787.1 hypothetical protein 1024918 4682671 CJJ81176_1107 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000767.1 1023521 R 354242 CDS YP_001000768.1 121612654 4683070 complement(1024902..1025246) 1 NC_008787.1 putative lipoprotein 1025246 4683070 CJJ81176_1108 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000768.1 1024902 R 354242 CDS YP_001000769.1 121613441 4683724 complement(1025411..1027840) 1 NC_008787.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1027840 leuS 4683724 leuS Campylobacter jejuni subsp. jejuni 81-176 leucyl-tRNA synthetase YP_001000769.1 1025411 R 354242 CDS YP_001000770.1 121613248 4682745 complement(1027850..1028821) 1 NC_008787.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1028821 secF 4682745 secF Campylobacter jejuni subsp. jejuni 81-176 preprotein translocase subunit SecF YP_001000770.1 1027850 R 354242 CDS YP_001000771.1 121613290 4682984 complement(1028821..1030401) 1 NC_008787.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1030401 secD 4682984 secD Campylobacter jejuni subsp. jejuni 81-176 preprotein translocase subunit SecD YP_001000771.1 1028821 R 354242 CDS YP_001000772.1 121612354 4682952 complement(1030394..1030666) 1 NC_008787.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1030666 yajC 4682952 yajC Campylobacter jejuni subsp. jejuni 81-176 preprotein translocase subunit YajC YP_001000772.1 1030394 R 354242 CDS YP_001000773.1 121613544 4682319 1030639..1031964 1 NC_008787.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1031964 cutE 4682319 cutE Campylobacter jejuni subsp. jejuni 81-176 apolipoprotein N-acyltransferase YP_001000773.1 1030639 D 354242 CDS YP_001000774.1 121612575 4682524 complement(1032202..1033413) 1 NC_008787.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1033413 metK 4682524 metK Campylobacter jejuni subsp. jejuni 81-176 S-adenosylmethionine synthetase YP_001000774.1 1032202 R 354242 CDS YP_001000775.1 121613737 4682690 1033538..1034761 1 NC_008787.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 1034761 4682690 CJJ81176_1115 Campylobacter jejuni subsp. jejuni 81-176 serine/threonine transporter SstT YP_001000775.1 1033538 D 354242 CDS YP_001000776.1 121612807 4682408 1034771..1035658 1 NC_008787.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1035658 pyrB 4682408 pyrB Campylobacter jejuni subsp. jejuni 81-176 aspartate carbamoyltransferase catalytic subunit YP_001000776.1 1034771 D 354242 CDS YP_001000777.1 121612359 4683524 1035662..1037380 1 NC_008787.1 identified by match to protein family HMM PF01432; match to protein family HMM TIGR02290; oligoendopeptidase F 1037380 pepF 4683524 pepF Campylobacter jejuni subsp. jejuni 81-176 oligoendopeptidase F YP_001000777.1 1035662 D 354242 CDS YP_001000778.1 121613077 4682313 1037374..1037811 1 NC_008787.1 hypothetical protein 1037811 4682313 CJJ81176_1118 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000778.1 1037374 D 354242 CDS YP_001000779.1 121612511 4683207 1037808..1039883 1 NC_008787.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase UvrD 1039883 4683207 CJJ81176_1119 Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent DNA helicase UvrD YP_001000779.1 1037808 D 354242 CDS YP_001000780.1 121612534 4683445 1039880..1040698 1 NC_008787.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1040698 truB 4683445 truB Campylobacter jejuni subsp. jejuni 81-176 tRNA pseudouridine synthase B YP_001000780.1 1039880 D 354242 CDS YP_001000781.1 121613351 4683159 1040692..1040919 1 NC_008787.1 identified by match to protein family HMM PF02599; match to protein family HMM TIGR00202; carbon storage regulator 1040919 csrA 4683159 csrA Campylobacter jejuni subsp. jejuni 81-176 carbon storage regulator YP_001000781.1 1040692 D 354242 CDS YP_001000782.1 121613239 4682873 1040916..1041683 1 NC_008787.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1041683 ispE 4682873 ispE Campylobacter jejuni subsp. jejuni 81-176 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001000782.1 1040916 D 354242 CDS YP_001000783.1 121612288 4683003 1041680..1042132 1 NC_008787.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1042132 smpB 4683003 smpB Campylobacter jejuni subsp. jejuni 81-176 SsrA-binding protein YP_001000783.1 1041680 D 354242 CDS YP_001000784.1 121613029 4682438 1042143..1042745 1 NC_008787.1 thioredoxin domain-containing protein 1042745 4682438 CJJ81176_1124 Campylobacter jejuni subsp. jejuni 81-176 thioredoxin domain-containing protein YP_001000784.1 1042143 D 354242 CDS YP_001000785.1 121612672 4683263 1042745..1043035 1 NC_008787.1 identified by match to protein family HMM PF02617; hypothetical protein 1043035 4683263 CJJ81176_1125 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000785.1 1042745 D 354242 CDS YP_001000786.1 121613654 4683696 1043032..1045161 1 NC_008787.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; ATP-dependent Clp protease, ATP-binding subunit ClpA 1045161 clpA 4683696 clpA Campylobacter jejuni subsp. jejuni 81-176 ATP-dependent Clp protease, ATP-binding subunit ClpA YP_001000786.1 1043032 D 354242 CDS YP_001000787.1 121612836 4682212 1045136..1045783 1 NC_008787.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1045783 aat 4682212 aat Campylobacter jejuni subsp. jejuni 81-176 leucyl/phenylalanyl-tRNA--protein transferase YP_001000787.1 1045136 D 354242 CDS YP_001000788.1 121612198 4683501 complement(1045805..1047094) 1 NC_008787.1 identified by match to protein family HMM PF00015; match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein 1047094 4683501 CJJ81176_1128 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_001000788.1 1045805 R 354242 CDS YP_001000789.1 121612170 4682631 complement(1047176..1047802) 1 NC_008787.1 identified by match to protein family HMM PF01914; MarC family integral membrane protein 1047802 4682631 CJJ81176_1129 Campylobacter jejuni subsp. jejuni 81-176 MarC family integral membrane protein YP_001000789.1 1047176 R 354242 CDS YP_001000790.1 121612353 4682655 complement(1047817..1048176) 1 NC_008787.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; a fusion protein of this enzyme with MsrA and thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase B 1048176 msrB 4682655 msrB Campylobacter jejuni subsp. jejuni 81-176 methionine sulfoxide reductase B YP_001000790.1 1047817 R 354242 CDS YP_001000791.1 121613282 4682307 1048266..1049063 1 NC_008787.1 identified by match to protein family HMM PF04305; hypothetical protein 1049063 4682307 CJJ81176_1131 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000791.1 1048266 D 354242 CDS YP_001000792.1 121612712 4682944 complement(1049054..1049782) 1 NC_008787.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase 1049782 pssA 4682944 pssA Campylobacter jejuni subsp. jejuni 81-176 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001000792.1 1049054 R 354242 CDS YP_001000793.1 121613426 4683700 complement(1049792..1050409) 1 NC_008787.1 phosphatidylserine decarboxylase-related protein 1050409 4683700 CJJ81176_1133 Campylobacter jejuni subsp. jejuni 81-176 phosphatidylserine decarboxylase-related protein YP_001000793.1 1049792 R 354242 CDS YP_001000794.1 121612703 4682760 complement(1050406..1052343) 1 NC_008787.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; cell division protein FtsH 1052343 ftsH 4682760 ftsH Campylobacter jejuni subsp. jejuni 81-176 cell division protein FtsH YP_001000794.1 1050406 R 354242 CDS YP_001000795.1 121612283 4683666 complement(1052347..1053192) 1 NC_008787.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 1053192 prmA 4683666 prmA Campylobacter jejuni subsp. jejuni 81-176 ribosomal protein L11 methyltransferase YP_001000795.1 1052347 R 354242 CDS YP_001000796.1 121613202 4682456 complement(1053215..1053607) 1 NC_008787.1 identified by match to protein family HMM PF00072; chemotaxis protein CheY 1053607 cheY 4682456 cheY Campylobacter jejuni subsp. jejuni 81-176 chemotaxis protein CheY YP_001000796.1 1053215 R 354242 CDS YP_001000797.1 121613359 4683051 complement(1053720..1054613) 1 NC_008787.1 general glycosylation pathway protein 1054613 pglG 4683051 pglG Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000797.1 1053720 R 354242 CDS YP_001000798.1 121612711 4682867 complement(1054613..1056385) 1 NC_008787.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; general glycosylation pathway protein 1056385 pglF 4682867 pglF Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000798.1 1054613 R 354242 CDS YP_001000799.1 121612710 4683652 complement(1056387..1057547) 1 NC_008787.1 identified by match to protein family HMM PF01041; general glycosylation pathway protein 1057547 pglE 4683652 pglE Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000799.1 1056387 R 354242 CDS YP_001000800.1 121613626 4683651 complement(1057645..1058256) 1 NC_008787.1 general glycosylation pathway protein 1058256 pglD 4683651 pglD Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000800.1 1057645 R 354242 CDS YP_001000801.1 121612358 4682593 complement(1058222..1058824) 1 NC_008787.1 identified by match to protein family HMM PF02397; general glycosylation pathway protein 1058824 pglC 4682593 pglC Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000801.1 1058222 R 354242 CDS YP_001000802.1 121613346 4682312 complement(1058817..1059947) 1 NC_008787.1 identified by match to protein family HMM PF00534; general glycosylation pathway protein 1059947 pglA 4682312 pglA Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000802.1 1058817 R 354242 CDS YP_001000803.1 121612188 4682880 complement(1059957..1062098) 1 NC_008787.1 identified by match to protein family HMM PF02516; general glycosylation pathway protein 1062098 pglB 4682880 pglB Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000803.1 1059957 R 354242 CDS YP_001000804.1 121613107 4682664 complement(1062102..1063199) 1 NC_008787.1 identified by match to protein family HMM PF00534; general glycosylation pathway protein 1063199 pglJ 4682664 pglJ Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000804.1 1062102 R 354242 CDS YP_001000805.1 121612765 4683156 complement(1063187..1064116) 1 NC_008787.1 identified by match to protein family HMM PF00535; general glycosylation pathway protein 1064116 pglI 4683156 pglI Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000805.1 1063187 R 354242 CDS YP_001000806.1 121613657 4683595 complement(1064109..1065188) 1 NC_008787.1 identified by match to protein family HMM PF00534; general glycosylation pathway protein 1065188 pglH 4683595 pglH Campylobacter jejuni subsp. jejuni 81-176 general glycosylation pathway protein YP_001000806.1 1064109 R 354242 CDS YP_001000807.1 121613309 4682550 complement(1065185..1066879) 1 NC_008787.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter, permease/ATP-binding protein 1066879 wlaB 4682550 wlaB Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, permease/ATP-binding protein YP_001000807.1 1065185 R 354242 CDS YP_001000808.1 121613372 4682923 complement(1066873..1067859) 1 NC_008787.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 1067859 galE 4682923 galE Campylobacter jejuni subsp. jejuni 81-176 UDP-glucose 4-epimerase YP_001000808.1 1066873 R 354242 CDS YP_001000809.1 121613680 4682852 complement(1067918..1068712) 1 NC_008787.1 identified by match to protein family HMM PF03104; polysaccharide biosynthesis protein 1068712 wlaX 4682852 wlaX Campylobacter jejuni subsp. jejuni 81-176 polysaccharide biosynthesis protein YP_001000809.1 1067918 R 354242 CDS YP_001000810.1 121612880 4682153 1068778..1069806 1 NC_008787.1 identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193; lipopolysaccharide heptosyltransferase I 1069806 waaC 4682153 waaC Campylobacter jejuni subsp. jejuni 81-176 lipopolysaccharide heptosyltransferase I YP_001000810.1 1068778 D 354242 CDS YP_001000811.1 121612821 4683436 1069796..1070683 1 NC_008787.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes; lipid A biosynthesis lauroyl acyltransferase 1070683 waaM 4683436 waaM Campylobacter jejuni subsp. jejuni 81-176 lipid A biosynthesis lauroyl acyltransferase YP_001000811.1 1069796 D 354242 CDS YP_001000812.1 121613734 4683581 1070680..1072227 1 NC_008787.1 identified by match to protein family HMM PF00535; lipooligosaccharide biosynthesis glycosyltransferase, putative 1072227 4683581 CJJ81176_1152 Campylobacter jejuni subsp. jejuni 81-176 lipooligosaccharide biosynthesis glycosyltransferase, putative YP_001000812.1 1070680 D 354242 CDS YP_001000813.1 121612981 4683097 1072218..1073399 1 NC_008787.1 galactosyltransferase 1073399 4683097 CJJ81176_1153 Campylobacter jejuni subsp. jejuni 81-176 galactosyltransferase YP_001000813.1 1072218 D 354242 CDS YP_001000814.1 121612423 4683323 1073704..1074489 1 NC_008787.1 identified by match to protein family HMM PF06306; beta-1,4-N-acetylgalactosaminyltransferase 1074489 4683323 CJJ81176_1154 Campylobacter jejuni subsp. jejuni 81-176 beta-1,4-N-acetylgalactosaminyltransferase YP_001000814.1 1073704 D 354242 CDS YP_001000815.1 121612308 4682215 complement(1074475..1074828) 1 NC_008787.1 beta-1,3-galactosyltransferase 1074828 4682215 CJJ81176_1155 Campylobacter jejuni subsp. jejuni 81-176 beta-1,3-galactosyltransferase YP_001000815.1 1074475 R 354242 CDS YP_001000816.1 121612965 4682416 complement(1074836..1075381) 1 NC_008787.1 identified by match to protein family HMM PF00535; beta-1,3-galactosyltransferase 1075381 4682416 CJJ81176_1156 Campylobacter jejuni subsp. jejuni 81-176 beta-1,3-galactosyltransferase YP_001000816.1 1074836 R 354242 CDS YP_001000817.1 121612718 4683333 1075470..1076345 1 NC_008787.1 identified by match to protein family HMM PF06002; alpha-2,3-sialyltransferase 1076345 4683333 CJJ81176_1157 Campylobacter jejuni subsp. jejuni 81-176 alpha-2,3-sialyltransferase YP_001000817.1 1075470 D 354242 CDS YP_001000818.1 121613163 4683647 1076346..1077386 1 NC_008787.1 identified by match to protein family HMM PF01354; match to protein family HMM PF03102; sialic acid synthase 1077386 4683647 CJJ81176_1158 Campylobacter jejuni subsp. jejuni 81-176 sialic acid synthase YP_001000818.1 1076346 D 354242 CDS YP_001000819.1 121613651 4683132 1077383..1078507 1 NC_008787.1 identified by match to protein family HMM PF02350; UDP-N-acetylglucosamine 2-epimerase 1078507 4683132 CJJ81176_1159 Campylobacter jejuni subsp. jejuni 81-176 UDP-N-acetylglucosamine 2-epimerase YP_001000819.1 1077383 D 354242 CDS YP_001000820.1 121613292 4682859 1078500..1079447 1 NC_008787.1 identified by match to protein family HMM PF06306; beta-1,4-N-acetylgalactosaminyltransferase 1079447 4682859 CJJ81176_1160 Campylobacter jejuni subsp. jejuni 81-176 beta-1,4-N-acetylgalactosaminyltransferase YP_001000820.1 1078500 D 354242 CDS YP_001000821.1 121613508 4682960 1079444..1080109 1 NC_008787.1 identified by match to protein family HMM PF02348; CMP-Neu5Ac synthetase 1080109 4682960 CJJ81176_1161 Campylobacter jejuni subsp. jejuni 81-176 CMP-Neu5Ac synthetase YP_001000821.1 1079444 D 354242 CDS YP_001000822.1 121612609 4682693 1080232..1080840 1 NC_008787.1 acetyltransferase 1080840 4682693 CJJ81176_1162 Campylobacter jejuni subsp. jejuni 81-176 acetyltransferase YP_001000822.1 1080232 D 354242 CDS YP_001000823.1 121613674 4682311 complement(1080921..1081748) 1 NC_008787.1 identified by match to protein family HMM PF00535; lipooligosaccharide biosynthesis glycosyltransferase 1081748 waaV 4682311 waaV Campylobacter jejuni subsp. jejuni 81-176 lipooligosaccharide biosynthesis glycosyltransferase YP_001000823.1 1080921 R 354242 CDS YP_001000824.1 121612891 4682633 1081807..1082760 1 NC_008787.1 identified by match to protein family HMM PF01075; match to protein family HMM TIGR02195; ADP-heptose--LPS heptosyltransferase II 1082760 waaF 4682633 waaF Campylobacter jejuni subsp. jejuni 81-176 ADP-heptose--LPS heptosyltransferase II YP_001000824.1 1081807 D 354242 CDS YP_001000825.1 121613507 4683357 complement(1082767..1083522) 1 NC_008787.1 identified by match to protein family HMM PF01755; LPS glycosyltransferase subfamily protein 1083522 4683357 CJJ81176_1165 Campylobacter jejuni subsp. jejuni 81-176 LPS glycosyltransferase subfamily protein YP_001000825.1 1082767 R 354242 CDS YP_001000826.1 121612579 4682698 complement(1083522..1084082) 1 NC_008787.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1084082 gmhA-1 4682698 gmhA-1 Campylobacter jejuni subsp. jejuni 81-176 phosphoheptose isomerase YP_001000826.1 1083522 R 354242 CDS YP_001000827.1 121613684 4682723 complement(1084079..1085464) 1 NC_008787.1 identified by match to protein family HMM PF00294; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02198; match to protein family HMM TIGR02199; D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase 1085464 hldE 4682723 hldE Campylobacter jejuni subsp. jejuni 81-176 D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase YP_001000827.1 1084079 R 354242 CDS YP_001000828.1 121612783 4682277 complement(1085457..1086410) 1 NC_008787.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR02197; ADP-L-glycero-D-mannoheptose-6-epimerase 1086410 waaD 4682277 waaD Campylobacter jejuni subsp. jejuni 81-176 ADP-L-glycero-D-mannoheptose-6-epimerase YP_001000828.1 1085457 R 354242 CDS YP_001000829.1 121613070 4683563 complement(1086411..1086971) 1 NC_008787.1 identified by match to protein family HMM PF08645; match to protein family HMM TIGR00213; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; hydrolase, putative 1086971 4683563 CJJ81176_1169 Campylobacter jejuni subsp. jejuni 81-176 hydrolase, putative YP_001000829.1 1086411 R 354242 CDS YP_001000830.1 121613690 4683629 1087053..1087355 1 NC_008787.1 identified by match to protein family HMM PF00034; cytochrome c553 1087355 cyf 4683629 cyf Campylobacter jejuni subsp. jejuni 81-176 cytochrome c553 YP_001000830.1 1087053 D 354242 CDS YP_001000831.1 121612755 4683418 complement(1087378..1087584) 1 NC_008787.1 identified by match to protein family HMM PF03597; match to protein family HMM TIGR00847; cytochrome oxidase maturation protein, cbb3-type, putative 1087584 4683418 CJJ81176_1171 Campylobacter jejuni subsp. jejuni 81-176 cytochrome oxidase maturation protein, cbb3-type, putative YP_001000831.1 1087378 R 354242 CDS YP_001000832.1 121613249 4683603 complement(1087581..1089932) 1 NC_008787.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; heavy metal translocating P-type ATPase 1089932 4683603 CJJ81176_1172 Campylobacter jejuni subsp. jejuni 81-176 heavy metal translocating P-type ATPase YP_001000832.1 1087581 R 354242 CDS YP_001000833.1 121612934 4682985 1090047..1091345 1 NC_008787.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1091345 rho 4682985 rho Campylobacter jejuni subsp. jejuni 81-176 transcription termination factor Rho YP_001000833.1 1090047 D 354242 CDS YP_001000834.1 121613206 4683362 1091349..1092878 1 NC_008787.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1092878 dnaX 4683362 dnaX Campylobacter jejuni subsp. jejuni 81-176 DNA polymerase III subunits gamma and tau YP_001000834.1 1091349 D 354242 CDS YP_001000835.1 121612232 4683038 complement(1092875..1093396) 1 NC_008787.1 hypothetical protein 1093396 4683038 CJJ81176_1746 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000835.1 1092875 R 354242 CDS YP_001000836.1 121612387 4682558 complement(1093468..1095567) 1 NC_008787.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 1095567 4682558 CJJ81176_1176 Campylobacter jejuni subsp. jejuni 81-176 copper-translocating P-type ATPase YP_001000836.1 1093468 R 354242 CDS YP_001000837.1 121613424 4682270 complement(1095567..1095731) 1 NC_008787.1 hypothetical protein 1095731 4682270 CJJ81176_1177 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000837.1 1095567 R 354242 CDS YP_001000838.1 121612677 4682764 complement(1095751..1096701) 1 NC_008787.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 1096701 4682764 CJJ81176_1178 Campylobacter jejuni subsp. jejuni 81-176 cation efflux family protein YP_001000838.1 1095751 R 354242 CDS YP_001000839.1 121613606 4683699 complement(1096776..1097039) 1 NC_008787.1 hypothetical protein 1097039 4683699 CJJ81176_1179 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000839.1 1096776 R 354242 CDS YP_001000840.1 121613193 4683783 complement(1097109..1097603) 1 NC_008787.1 hypothetical protein 1097603 4683783 CJJ81176_1180 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000840.1 1097109 R 354242 CDS YP_001000841.1 121613402 4683058 complement(1097600..1098376) 1 NC_008787.1 identified by match to protein family HMM PF06738; hypothetical protein 1098376 4683058 CJJ81176_1181 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000841.1 1097600 R 354242 CDS YP_001000842.1 121612218 4682818 1098444..1099370 1 NC_008787.1 identified by match to protein family HMM PF00056; match to protein family HMM PF02866; L-lactate dehydrogenase 1099370 ldh 4682818 ldh Campylobacter jejuni subsp. jejuni 81-176 L-lactate dehydrogenase YP_001000842.1 1098444 D 354242 CDS YP_001000843.1 121613253 4682581 complement(1099367..1099969) 1 NC_008787.1 DedA family protein 1099969 4682581 CJJ81176_1183 Campylobacter jejuni subsp. jejuni 81-176 DedA family protein YP_001000843.1 1099367 R 354242 CDS YP_001000844.1 121612953 4682999 complement(1100049..1100276) 1 NC_008787.1 hypothetical protein 1100276 4682999 CJJ81176_1184 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000844.1 1100049 R 354242 CDS YP_001000845.1 121612867 4683343 complement(1100287..1101687) 1 NC_008787.1 hypothetical protein 1101687 4683343 CJJ81176_1185 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000845.1 1100287 R 354242 CDS YP_001000846.1 121613502 4683461 complement(1101851..1102333) 1 NC_008787.1 identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase B 1102333 ppiB 4683461 ppiB Campylobacter jejuni subsp. jejuni 81-176 peptidyl-prolyl cis-trans isomerase B YP_001000846.1 1101851 R 354242 CDS YP_001000847.1 121612584 4682695 complement(1102343..1103050) 1 NC_008787.1 identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 1103050 4682695 CJJ81176_1187 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000847.1 1102343 R 354242 CDS YP_001000848.1 121613514 4682605 1103159..1103500 1 NC_008787.1 identified by match to protein family HMM PF00893; SMR family multidrug efflux pump 1103500 4682605 CJJ81176_1188 Campylobacter jejuni subsp. jejuni 81-176 SMR family multidrug efflux pump YP_001000848.1 1103159 D 354242 CDS YP_001000849.1 121612560 4683748 1103500..1103808 1 NC_008787.1 identified by match to protein family HMM PF00893; SMR family multidrug efflux pump 1103808 4683748 CJJ81176_1189 Campylobacter jejuni subsp. jejuni 81-176 SMR family multidrug efflux pump YP_001000849.1 1103500 D 354242 CDS YP_001000850.1 121613183 4682898 complement(1103826..1105418) 1 NC_008787.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1105418 argS 4682898 argS Campylobacter jejuni subsp. jejuni 81-176 arginyl-tRNA synthetase YP_001000850.1 1103826 R 354242 CDS YP_001000851.1 121612202 4683076 complement(1105430..1105669) 1 NC_008787.1 identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; twin arginine-targeting protein translocase 1105669 4683076 CJJ81176_1191 Campylobacter jejuni subsp. jejuni 81-176 twin arginine-targeting protein translocase YP_001000851.1 1105430 R 354242 CDS YP_001000852.1 121612644 4682629 complement(1105671..1106294) 1 NC_008787.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1106294 gmk 4682629 gmk Campylobacter jejuni subsp. jejuni 81-176 guanylate kinase YP_001000852.1 1105671 R 354242 CDS YP_001000853.1 121613577 4683736 complement(1106291..1107919) 1 NC_008787.1 hypothetical protein 1107919 4683736 CJJ81176_1193 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000853.1 1106291 R 354242 CDS YP_001000854.1 121612403 4683183 complement(1107976..1108743) 1 NC_008787.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1108743 fliR 4683183 fliR Campylobacter jejuni subsp. jejuni 81-176 flagellar biosynthesis protein FliR YP_001000854.1 1107976 R 354242 CDS YP_001000855.1 121613354 4682240 complement(1108730..1109365) 1 NC_008787.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1109365 4682240 CJJ81176_1195 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein YP_001000855.1 1108730 R 354242 CDS YP_001000856.1 121612368 4682876 complement(1109378..1110451) 1 NC_008787.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1110451 tsf 4682876 tsf Campylobacter jejuni subsp. jejuni 81-176 elongation factor Ts YP_001000856.1 1109378 R 354242 CDS YP_001000857.1 121613320 4682285 complement(1110451..1111242) 1 NC_008787.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1111242 rpsB 4682285 rpsB Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S2 YP_001000857.1 1110451 R 354242 CDS YP_001000858.1 121612108 4682910 complement(1111358..1112521) 1 NC_008787.1 identified by match to protein family HMM PF02353; cyclopropane-fatty-acyl-phospholipid synthase, putative 1112521 4682910 CJJ81176_1198 Campylobacter jejuni subsp. jejuni 81-176 cyclopropane-fatty-acyl-phospholipid synthase, putative YP_001000858.1 1111358 R 354242 CDS YP_001000859.1 121613025 4682386 complement(1112649..1113773) 1 NC_008787.1 identified by match to protein family HMM PF00034; ubiquinol--cytochrome c reductase, cytochrome c1 subunit 1113773 petC 4682386 petC Campylobacter jejuni subsp. jejuni 81-176 ubiquinol--cytochrome c reductase, cytochrome c1 subunit YP_001000859.1 1112649 R 354242 CDS YP_001000860.1 121612753 4683255 complement(1113770..1115020) 1 NC_008787.1 identified by match to protein family HMM PF00032; match to protein family HMM PF00033; ubiquinol--cytochrome c reductase, cytochrome b subunit 1115020 petB 4683255 petB Campylobacter jejuni subsp. jejuni 81-176 ubiquinol--cytochrome c reductase, cytochrome b subunit YP_001000860.1 1113770 R 354242 CDS YP_001000861.1 121613053 4683597 complement(1115022..1115525) 1 NC_008787.1 identified by match to protein family HMM PF00355; match to protein family HMM TIGR01416; ubiquinol--cytochrome c reductase, iron-sulfur subunit 1115525 petA 4683597 petA Campylobacter jejuni subsp. jejuni 81-176 ubiquinol--cytochrome c reductase, iron-sulfur subunit YP_001000861.1 1115022 R 354242 CDS YP_001000862.1 121612510 4683227 complement(1115616..1116902) 1 NC_008787.1 identified by match to protein family HMM PF02040; match to protein family HMM PF03600; arsenical pump membrane protein 1116902 arsB 4683227 arsB Campylobacter jejuni subsp. jejuni 81-176 arsenical pump membrane protein YP_001000862.1 1115616 R 354242 CDS YP_001000863.1 121613192 4683444 complement(1116903..1118762) 1 NC_008787.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1118762 gidA 4683444 gidA Campylobacter jejuni subsp. jejuni 81-176 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_001000863.1 1116903 R 354242 CDS YP_001000864.1 121613242 4683057 complement(1118850..1119347) 1 NC_008787.1 identified by match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein 1119347 4683057 CJJ81176_1204 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_001000864.1 1118850 R 354242 CDS YP_001000865.1 121613515 4683004 complement(1119365..1120744) 1 NC_008787.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1120744 4683004 CJJ81176_1205 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_001000865.1 1119365 R 354242 CDS YP_001000866.1 121612596 4683749 complement(1120865..1121359) 1 NC_008787.1 identified by match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein 1121359 4683749 CJJ81176_1206 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_001000866.1 1120865 R 354242 CDS YP_001000867.1 121613384 4682445 1121628..1123004 1 NC_008787.1 identified by match to protein family HMM PF00375; C4-dicarboxylate transport protein 1123004 dctA 4682445 dctA Campylobacter jejuni subsp. jejuni 81-176 C4-dicarboxylate transport protein YP_001000867.1 1121628 D 354242 CDS YP_001000868.1 121613678 4682828 complement(1123001..1123807) 1 NC_008787.1 hypothetical protein 1123807 4682828 CJJ81176_1208 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000868.1 1123001 R 354242 CDS YP_001000869.1 121612921 4682339 1123949..1125475 1 NC_008787.1 identified by match to protein family HMM PF01384; phosphate transporter family protein 1125475 4682339 CJJ81176_1209 Campylobacter jejuni subsp. jejuni 81-176 phosphate transporter family protein YP_001000869.1 1123949 D 354242 CDS YP_001000870.1 121612810 4683399 complement(1125483..1126661) 1 NC_008787.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1126661 4683399 CJJ81176_1210 Campylobacter jejuni subsp. jejuni 81-176 dihydroorotase YP_001000870.1 1125483 R 354242 CDS YP_001000871.1 121612958 4683527 complement(1126671..1127564) 1 NC_008787.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1127564 gpsA 4683527 gpsA Campylobacter jejuni subsp. jejuni 81-176 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001000871.1 1126671 R 354242 CDS YP_001000872.1 121612788 4683338 complement(1127564..1128982) 1 NC_008787.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1128982 gatB 4683338 gatB Campylobacter jejuni subsp. jejuni 81-176 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001000872.1 1127564 R 354242 CDS YP_001000873.1 121613162 4683564 1129097..1129591 1 NC_008787.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1129591 luxS 4683564 luxS Campylobacter jejuni subsp. jejuni 81-176 S-ribosylhomocysteinase YP_001000873.1 1129097 D 354242 CDS YP_001000874.1 121612168 4683131 1129903..1130895 1 NC_008787.1 identified by match to protein family HMM PF03171; 2OG-Fe(II) oxygenase family oxidoreductase 1130895 4683131 CJJ81176_1214 Campylobacter jejuni subsp. jejuni 81-176 2OG-Fe(II) oxygenase family oxidoreductase YP_001000874.1 1129903 D 354242 CDS YP_001000875.1 121612613 4682651 1130888..1131676 1 NC_008787.1 identified by match to protein family HMM PF03180; NLPA family lipoprotein 1131676 4682651 CJJ81176_1215 Campylobacter jejuni subsp. jejuni 81-176 NLPA family lipoprotein YP_001000875.1 1130888 D 354242 CDS YP_001000876.1 121613501 4682274 1131688..1133952 1 NC_008787.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 1133952 metE 4682274 metE Campylobacter jejuni subsp. jejuni 81-176 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_001000876.1 1131688 D 354242 CDS YP_001000877.1 121612730 4682700 1133962..1134810 1 NC_008787.1 identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; 5,10-methylenetetrahydrofolate reductase 1134810 metF 4682700 metF Campylobacter jejuni subsp. jejuni 81-176 5,10-methylenetetrahydrofolate reductase YP_001000877.1 1133962 D 354242 CDS YP_001000878.1 121613723 4683622 complement(1134832..1134978) 1 NC_008787.1 hypothetical protein 1134978 4683622 CJJ81176_1218 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000878.1 1134832 R 354242 CDS YP_001000879.1 121612748 4682168 complement(1135020..1135700) 1 NC_008787.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1135700 atpB 4682168 atpB Campylobacter jejuni subsp. jejuni 81-176 F0F1 ATP synthase subunit A YP_001000879.1 1135020 R 354242 CDS YP_001000880.1 121612483 4683606 complement(1135769..1137109) 1 NC_008787.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1137109 radA 4683606 radA Campylobacter jejuni subsp. jejuni 81-176 DNA repair protein RadA YP_001000880.1 1135769 R 354242 CDS YP_001000881.1 121613201 4683106 complement(1137109..1137975) 1 NC_008787.1 identified by match to protein family HMM PF00448; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 1137975 ftsY 4683106 ftsY Campylobacter jejuni subsp. jejuni 81-176 signal recognition particle-docking protein FtsY YP_001000881.1 1137109 R 354242 CDS YP_001000882.1 121612300 4683054 complement(1137975..1138532) 1 NC_008787.1 putative lipoprotein 1138532 4683054 CJJ81176_1222 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001000882.1 1137975 R 354242 CDS YP_001000883.1 121613332 4682430 complement(1138557..1138682) 1 NC_008787.1 hypothetical protein 1138682 4682430 CJJ81176_1747 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000883.1 1138557 R 354242 CDS YP_001000884.1 121612206 4682904 1139162..1140715 1 NC_008787.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1140715 4682904 CJJ81176_1223 Campylobacter jejuni subsp. jejuni 81-176 phosphodiesterase YP_001000884.1 1139162 D 354242 CDS YP_001000885.1 121613115 4682618 1140724..1141281 1 NC_008787.1 DedA family protein 1141281 4682618 CJJ81176_1224 Campylobacter jejuni subsp. jejuni 81-176 DedA family protein YP_001000885.1 1140724 D 354242 CDS YP_001000886.1 121613677 4683158 complement(1142484..1143290) 1 NC_008787.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; YihY family protein 1143290 yihY 4683158 yihY Campylobacter jejuni subsp. jejuni 81-176 YihY family protein YP_001000886.1 1142484 R 354242 CDS YP_001000887.1 121612904 4683231 complement(1143294..1144676) 1 NC_008787.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase, subunit GlcD 1144676 glcD 4683231 glcD Campylobacter jejuni subsp. jejuni 81-176 glycolate oxidase, subunit GlcD YP_001000887.1 1143294 R 354242 CDS YP_001000888.1 121613471 4683406 complement(1144679..1145389) 1 NC_008787.1 hypothetical protein 1145389 4683406 CJJ81176_1227 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000888.1 1144679 R 354242 CDS YP_001000889.1 121613663 4683007 1145526..1146686 1 NC_008787.1 identified by match to protein family HMM PF01551; M24/M37 family peptidase 1146686 4683007 CJJ81176_1228 Campylobacter jejuni subsp. jejuni 81-176 M24/M37 family peptidase YP_001000889.1 1145526 D 354242 CDS YP_001000890.1 121612350 4683642 complement(1146683..1146886) 1 NC_008787.1 hypothetical protein 1146886 4683642 CJJ81176_1229 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000890.1 1146683 R 354242 CDS YP_001000891.1 121612717 4682325 complement(1146888..1147568) 1 NC_008787.1 identified by match to protein family HMM PF02578; hypothetical protein 1147568 4682325 CJJ81176_1230 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000891.1 1146888 R 354242 CDS YP_001000892.1 121613594 4683638 complement(1147532..1148143) 1 NC_008787.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1148143 ribE 4683638 ribE Campylobacter jejuni subsp. jejuni 81-176 riboflavin synthase subunit alpha YP_001000892.1 1147532 R 354242 CDS YP_001000893.1 121612825 4683372 complement(1148152..1150692) 1 NC_008787.1 hypothetical protein 1150692 4683372 CJJ81176_1232 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000893.1 1148152 R 354242 CDS YP_001000894.1 121612930 4683504 1150854..1151114 1 NC_008787.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1151114 groES 4683504 groES Campylobacter jejuni subsp. jejuni 81-176 co-chaperonin GroES YP_001000894.1 1150854 D 354242 CDS YP_001000895.1 121612249 4683390 1151136..1152773 1 NC_008787.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1152773 groEL 4683390 groEL Campylobacter jejuni subsp. jejuni 81-176 chaperonin GroEL YP_001000895.1 1151136 D 354242 CDS YP_001000896.1 121613339 4682120 complement(1152816..1153877) 1 NC_008787.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1153877 4682120 CJJ81176_1235 Campylobacter jejuni subsp. jejuni 81-176 sensor histidine kinase YP_001000896.1 1152816 R 354242 CDS YP_001000897.1 121613383 4682891 complement(1153999..1154664) 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1154664 4682891 CJJ81176_1236 Campylobacter jejuni subsp. jejuni 81-176 DNA-binding response regulator YP_001000897.1 1153999 R 354242 CDS YP_001000898.1 121612625 4682839 1154812..1155411 1 NC_008787.1 identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hemerythrin family non-heme iron protein 1155411 4682839 CJJ81176_1237 Campylobacter jejuni subsp. jejuni 81-176 hemerythrin family non-heme iron protein YP_001000898.1 1154812 D 354242 CDS YP_001000899.1 121613386 4682148 1155422..1155670 1 NC_008787.1 hypothetical protein 1155670 4682148 CJJ81176_1238 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000899.1 1155422 D 354242 CDS YP_001000900.1 121613204 4682470 complement(1155928..1157100) 1 NC_008787.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1157100 4682470 CJJ81176_1240 Campylobacter jejuni subsp. jejuni 81-176 sensor histidine kinase YP_001000900.1 1155928 R 354242 CDS YP_001000901.1 121612729 4683049 complement(1157172..1157846) 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1157846 4683049 CJJ81176_1241 Campylobacter jejuni subsp. jejuni 81-176 DNA-binding response regulator YP_001000901.1 1157172 R 354242 CDS YP_001000902.1 121613042 4683626 complement(1157922..1159340) 1 NC_008787.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; protease DO 1159340 htrA 4683626 htrA Campylobacter jejuni subsp. jejuni 81-176 protease DO YP_001000902.1 1157922 R 354242 CDS YP_001000903.1 121612573 4683232 1159541..1160434 1 NC_008787.1 identified by match to protein family HMM PF00226; match to protein family HMM PF01556; co-chaperone protein DnaJ 1160434 dnaJ-1 4683232 dnaJ-1 Campylobacter jejuni subsp. jejuni 81-176 co-chaperone protein DnaJ YP_001000903.1 1159541 D 354242 CDS YP_001000904.1 121613731 4682747 1160450..1160824 1 NC_008787.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1160824 4682747 CJJ81176_1244 Campylobacter jejuni subsp. jejuni 81-176 MerR family transcriptional regulator YP_001000904.1 1160450 D 354242 CDS YP_001000905.1 121613270 4682561 1160831..1162456 1 NC_008787.1 identified by match to protein family HMM PF00999; match to protein family HMM PF02254; sodium/hydrogen exchanger family protein 1162456 4682561 CJJ81176_1245 Campylobacter jejuni subsp. jejuni 81-176 sodium/hydrogen exchanger family protein YP_001000905.1 1160831 D 354242 CDS YP_001000906.1 121613541 4682968 1162466..1162798 1 NC_008787.1 hypothetical protein 1162798 4682968 CJJ81176_1246 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000906.1 1162466 D 354242 CDS YP_001000907.1 121613211 4682103 1162795..1163415 1 NC_008787.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; HAD-superfamily hydrolase, subfamily IA, variant 1 family protein 1163415 4682103 CJJ81176_1247 Campylobacter jejuni subsp. jejuni 81-176 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein YP_001000907.1 1162795 D 354242 CDS YP_001000908.1 121612141 4683047 1163471..1165465 1 NC_008787.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1165465 glyS 4683047 glyS Campylobacter jejuni subsp. jejuni 81-176 glycyl-tRNA synthetase subunit beta YP_001000908.1 1163471 D 354242 CDS YP_001000909.1 121613380 4682776 1165549..1166283 1 NC_008787.1 identified by match to protein family HMM PF01551; M24/M37 family peptidase 1166283 4682776 CJJ81176_1249 Campylobacter jejuni subsp. jejuni 81-176 M24/M37 family peptidase YP_001000909.1 1165549 D 354242 CDS YP_001000910.1 121612945 4682844 1166280..1167230 1 NC_008787.1 identified by match to protein family HMM PF02636; hypothetical protein 1167230 4682844 CJJ81176_1250 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000910.1 1166280 D 354242 CDS YP_001000911.1 121612781 4683345 complement(1167227..1168201) 1 NC_008787.1 identified by match to protein family HMM PF02541; Ppx/GppA family phosphatase 1168201 4683345 CJJ81176_1251 Campylobacter jejuni subsp. jejuni 81-176 Ppx/GppA family phosphatase YP_001000911.1 1167227 R 354242 CDS YP_001000912.1 121613705 4683569 1168257..1169045 1 NC_008787.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1169045 pdxJ 4683569 pdxJ Campylobacter jejuni subsp. jejuni 81-176 pyridoxine 5'-phosphate synthase YP_001000912.1 1168257 D 354242 CDS YP_001000913.1 121612245 4682344 1169026..1170120 1 NC_008787.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1170120 pdxA 4682344 pdxA Campylobacter jejuni subsp. jejuni 81-176 4-hydroxythreonine-4-phosphate dehydrogenase YP_001000913.1 1169026 D 354242 CDS YP_001000914.1 121613148 4682538 complement(1170098..1170421) 1 NC_008787.1 hypothetical protein 1170421 4682538 CJJ81176_1254 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000914.1 1170098 R 354242 CDS YP_001000915.1 121612840 4683119 complement(1170482..1170679) 1 NC_008787.1 putative periplasmic protein 1170679 4683119 CJJ81176_1255 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001000915.1 1170482 R 354242 CDS YP_001000916.1 121613589 4683478 1170823..1172022 1 NC_008787.1 identified by match to protein family HMM PF07690; transporter, putative 1172022 4683478 CJJ81176_1256 Campylobacter jejuni subsp. jejuni 81-176 transporter, putative YP_001000916.1 1170823 D 354242 CDS YP_001000917.1 121612420 4683367 1172078..1172398 1 NC_008787.1 hypothetical protein 1172398 4683367 CJJ81176_1257 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000917.1 1172078 D 354242 CDS YP_001000918.1 121613555 4682220 1172578..1173600 1 NC_008787.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1173600 hemE 4682220 hemE Campylobacter jejuni subsp. jejuni 81-176 uroporphyrinogen decarboxylase YP_001000918.1 1172578 D 354242 CDS YP_001000919.1 121613061 4682518 1173597..1174499 1 NC_008787.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1174499 4682518 CJJ81176_1259 Campylobacter jejuni subsp. jejuni 81-176 radical SAM domain-containing protein YP_001000919.1 1173597 D 354242 CDS YP_001000920.1 121612128 4683261 complement(1174496..1175692) 1 NC_008787.1 hypothetical protein 1175692 4683261 CJJ81176_1260 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000920.1 1174496 R 354242 CDS YP_001000921.1 121613588 4682477 complement(1175694..1177496) 1 NC_008787.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1177496 uvrC 4682477 uvrC Campylobacter jejuni subsp. jejuni 81-176 excinuclease ABC subunit C YP_001000921.1 1175694 R 354242 CDS YP_001000922.1 121612866 4683366 complement(1177489..1177983) 1 NC_008787.1 hypothetical protein 1177983 4683366 CJJ81176_1262 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000922.1 1177489 R 354242 CDS YP_001000923.1 121612779 4683460 1177987..1178118 1 NC_008787.1 hypothetical protein 1178118 4683460 CJJ81176_1263 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000923.1 1177987 D 354242 CDS YP_001000924.1 121613709 4683567 1178122..1179657 1 NC_008787.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1179657 guaA 4683567 guaA Campylobacter jejuni subsp. jejuni 81-176 GMP synthase YP_001000924.1 1178122 D 354242 CDS YP_001000925.1 121612207 4682410 1179743..1181203 1 NC_008787.1 hypothetical protein 1181203 4682410 CJJ81176_1265 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000925.1 1179743 D 354242 CDS YP_001000926.1 121613087 4682619 1181443..1182693 1 NC_008787.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1182693 purD 4682619 purD Campylobacter jejuni subsp. jejuni 81-176 phosphoribosylamine--glycine ligase YP_001000926.1 1181443 D 354242 CDS YP_001000927.1 121613341 4683187 1182690..1183142 1 NC_008787.1 identified by match to protein family HMM PF06271; hypothetical protein 1183142 4683187 CJJ81176_1267 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000927.1 1182690 D 354242 CDS YP_001000928.1 121612176 4682887 1183153..1185180 1 NC_008787.1 identified by match to protein family HMM PF04453; organic solvent tolerance protein, putative 1185180 4682887 CJJ81176_1268 Campylobacter jejuni subsp. jejuni 81-176 organic solvent tolerance protein, putative YP_001000928.1 1183153 D 354242 CDS YP_001000929.1 121612552 4682679 1185250..1187409 1 NC_008787.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase 1187409 pnp 4682679 pnp Campylobacter jejuni subsp. jejuni 81-176 polynucleotide phosphorylase/polyadenylase YP_001000929.1 1185250 D 354242 CDS YP_001000930.1 121613018 4682994 1187406..1187888 1 NC_008787.1 identified by match to protein family HMM PF03167; hypothetical protein 1187888 4682994 CJJ81176_1270 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000930.1 1187406 D 354242 CDS YP_001000931.1 121612874 4683266 1187946..1188155 1 NC_008787.1 identified by match to protein family HMM PF01361; match to protein family HMM TIGR00013; hypothetical protein 1188155 4683266 CJJ81176_1271 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000931.1 1187946 D 354242 CDS YP_001000932.1 121612955 4683440 complement(1188152..1188814) 1 NC_008787.1 hypothetical protein 1188814 4683440 CJJ81176_1272 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000932.1 1188152 R 354242 CDS YP_001000933.1 121613452 4683351 complement(1188832..1190016) 1 NC_008787.1 identified by match to protein family HMM PF07690; multidrug resistance efflux transporter, authentic frameshift 1190016 4683351 CJJ81176_1273 Campylobacter jejuni subsp. jejuni 81-176 multidrug resistance efflux transporter, authentic frameshift YP_001000933.1 1188832 R 354242 CDS YP_001000934.1 121612713 4682762 1190070..1190525 1 NC_008787.1 identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase family protein 1190525 4682762 CJJ81176_1274 Campylobacter jejuni subsp. jejuni 81-176 low molecular weight phosphotyrosine protein phosphatase family protein YP_001000934.1 1190070 D 354242 CDS YP_001000935.1 121612668 4683701 1190777..1192051 1 NC_008787.1 identified by match to protein family HMM PF05538; major outer membrane protein 1192051 porA 4683701 porA Campylobacter jejuni subsp. jejuni 81-176 major outer membrane protein YP_001000935.1 1190777 D 354242 CDS YP_001000936.1 121612392 4683708 complement(1192166..1193290) 1 NC_008787.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 1193290 dnaJ-2 4683708 dnaJ-2 Campylobacter jejuni subsp. jejuni 81-176 chaperone protein DnaJ YP_001000936.1 1192166 R 354242 CDS YP_001000937.1 121613322 4682254 1193447..1194118 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1194118 racR 4682254 racR Campylobacter jejuni subsp. jejuni 81-176 DNA-binding response regulator YP_001000937.1 1193447 D 354242 CDS YP_001000938.1 121612247 4682906 1194175..1195350 1 NC_008787.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1195350 racS 4682906 racS Campylobacter jejuni subsp. jejuni 81-176 sensor histidine kinase YP_001000938.1 1194175 D 354242 CDS YP_001000939.1 121613624 4682534 1195350..1195922 1 NC_008787.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1195922 recR 4682534 recR Campylobacter jejuni subsp. jejuni 81-176 recombination protein RecR YP_001000939.1 1195350 D 354242 CDS YP_001000940.1 121612253 4683143 complement(1195919..1196455) 1 NC_008787.1 identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072; hydrogenase maturation protease HydD 1196455 hydD 4683143 hydD Campylobacter jejuni subsp. jejuni 81-176 hydrogenase maturation protease HydD YP_001000940.1 1195919 R 354242 CDS YP_001000941.1 121612897 4683769 complement(1196452..1197168) 1 NC_008787.1 identified by match to protein family HMM PF01292; match to protein family HMM TIGR02125; quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit 1197168 hydC 4683769 hydC Campylobacter jejuni subsp. jejuni 81-176 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit YP_001000941.1 1196452 R 354242 CDS YP_001000942.1 121612830 4683425 complement(1197155..1198870) 1 NC_008787.1 identified by match to protein family HMM PF00374; quinone-reactive Ni/Fe-hydrogenase, large subunit 1198870 hydB 4683425 hydB Campylobacter jejuni subsp. jejuni 81-176 quinone-reactive Ni/Fe-hydrogenase, large subunit YP_001000942.1 1197155 R 354242 CDS YP_001000943.1 121613368 4683505 complement(1198873..1199955) 1 NC_008787.1 identified by match to protein family HMM PF01058; match to protein family HMM PF08425; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409; quinone-reactive Ni/Fe-hydrogenase, small subunit 1199955 hydA 4683505 hydA Campylobacter jejuni subsp. jejuni 81-176 quinone-reactive Ni/Fe-hydrogenase, small subunit YP_001000943.1 1198873 R 354242 CDS YP_001000944.1 121612617 4682848 complement(1200132..1201973) 1 NC_008787.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 1201973 mnmC 4682848 mnmC Campylobacter jejuni subsp. jejuni 81-176 5-methylaminomethyl-2-thiouridine methyltransferase YP_001000944.1 1200132 R 354242 CDS YP_001000945.1 121612331 4682242 complement(1201970..1203949) 1 NC_008787.1 identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 1203949 4682242 CJJ81176_1285 Campylobacter jejuni subsp. jejuni 81-176 N-acetylmuramoyl-L-alanine amidase YP_001000945.1 1201970 R 354242 CDS YP_001000946.1 121612402 4682352 complement(1203949..1205040) 1 NC_008787.1 identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase family oxidoreductase 1205040 4682352 CJJ81176_1286 Campylobacter jejuni subsp. jejuni 81-176 2-nitropropane dioxygenase family oxidoreductase YP_001000946.1 1203949 R 354242 CDS YP_001000947.1 121613329 4682239 complement(1205037..1206242) 1 NC_008787.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1206242 tyrS 4682239 tyrS Campylobacter jejuni subsp. jejuni 81-176 tyrosyl-tRNA synthetase YP_001000947.1 1205037 R 354242 CDS YP_001000948.1 121612152 4682897 complement(1206254..1208425) 1 NC_008787.1 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; RelA/SpoT family protein 1208425 4682897 CJJ81176_1288 Campylobacter jejuni subsp. jejuni 81-176 RelA/SpoT family protein YP_001000948.1 1206254 R 354242 CDS YP_001000949.1 121613074 4682590 complement(1208433..1208657) 1 NC_008787.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1208657 rpoZ 4682590 rpoZ Campylobacter jejuni subsp. jejuni 81-176 DNA-directed RNA polymerase subunit omega YP_001000949.1 1208433 R 354242 CDS YP_001000950.1 121613114 4683198 complement(1208668..1209387) 1 NC_008787.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1209387 pyrH 4683198 pyrH Campylobacter jejuni subsp. jejuni 81-176 uridylate kinase YP_001000950.1 1208668 R 354242 CDS YP_001000951.1 121612204 4683157 complement(1209439..1210632) 1 NC_008787.1 identified by match to protein family HMM PF01551; M24/M37 family peptidase 1210632 4683157 CJJ81176_1291 Campylobacter jejuni subsp. jejuni 81-176 M24/M37 family peptidase YP_001000951.1 1209439 R 354242 CDS YP_001000952.1 121612564 4682622 complement(1210629..1211387) 1 NC_008787.1 cell division protein FtsX, putative 1211387 4682622 CJJ81176_1292 Campylobacter jejuni subsp. jejuni 81-176 cell division protein FtsX, putative YP_001000952.1 1210629 R 354242 CDS YP_001000953.1 121612464 4682850 complement(1211422..1212087) 1 NC_008787.1 identified by match to protein family HMM PF00005; lipoprotein releasing system ATP-binding protein LolD 1212087 lolD 4682850 lolD Campylobacter jejuni subsp. jejuni 81-176 lipoprotein releasing system ATP-binding protein LolD YP_001000953.1 1211422 R 354242 CDS YP_001000954.1 121612811 4682515 complement(1212157..1213335) 1 NC_008787.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1213335 trmB 4682515 trmB Campylobacter jejuni subsp. jejuni 81-176 tRNA (guanine-N(7)-)-methyltransferase YP_001000954.1 1212157 R 354242 CDS YP_001000955.1 121613534 4683528 complement(1213335..1214567) 1 NC_008787.1 identified by match to protein family HMM PF00041; fibronectin type III domain-containing protein 1214567 4683528 CJJ81176_1295 Campylobacter jejuni subsp. jejuni 81-176 fibronectin type III domain-containing protein YP_001000955.1 1213335 R 354242 CDS YP_001000956.1 121612140 4682100 complement(1214515..1215483) 1 NC_008787.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase A 1215483 4682100 CJJ81176_1296 Campylobacter jejuni subsp. jejuni 81-176 ribosomal large subunit pseudouridine synthase A YP_001000956.1 1214515 R 354242 CDS YP_001000957.1 121613696 4682775 1215561..1216661 1 NC_008787.1 identified by match to protein family HMM PF01098; rod shape-determining protein RodA, putative 1216661 4682775 CJJ81176_1297 Campylobacter jejuni subsp. jejuni 81-176 rod shape-determining protein RodA, putative YP_001000957.1 1215561 D 354242 CDS YP_001000958.1 121612523 4683729 1217115..1218458 1 NC_008787.1 identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933; TrkH family potassium uptake protein 1218458 4683729 CJJ81176_1300 Campylobacter jejuni subsp. jejuni 81-176 TrkH family potassium uptake protein YP_001000958.1 1217115 D 354242 CDS YP_001000959.1 121613516 4683389 1218469..1219119 1 NC_008787.1 identified by match to protein family HMM PF02080; match to protein family HMM PF02254; potassium uptake protein TrkA, putative 1219119 4683389 CJJ81176_1301 Campylobacter jejuni subsp. jejuni 81-176 potassium uptake protein TrkA, putative YP_001000959.1 1218469 D 354242 CDS YP_001000960.1 121612591 4683746 complement(1219116..1219787) 1 NC_008787.1 identified by match to protein family HMM PF02621; hypothetical protein 1219787 4683746 CJJ81176_1302 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000960.1 1219116 R 354242 CDS YP_001000961.1 121612877 4682485 complement(1219793..1220419) 1 NC_008787.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1220419 upp 4682485 upp Campylobacter jejuni subsp. jejuni 81-176 uracil phosphoribosyltransferase YP_001000961.1 1219793 R 354242 CDS YP_001000962.1 121613742 4683451 complement(1220416..1221651) 1 NC_008787.1 identified by match to protein family HMM PF00390; match to protein family HMM PF03949; NADP-dependent malic enzyme, truncation 1221651 4683451 CJJ81176_1304 Campylobacter jejuni subsp. jejuni 81-176 NADP-dependent malic enzyme, truncation YP_001000962.1 1220416 R 354242 CDS YP_001000963.1 121612812 4683248 complement(1221653..1223044) 1 NC_008787.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1223044 gltX 4683248 gltX Campylobacter jejuni subsp. jejuni 81-176 glutamyl-tRNA synthetase YP_001000963.1 1221653 R 354242 CDS YP_001000964.1 121612944 4683531 1223109..1223924 1 NC_008787.1 hypothetical protein 1223924 4683531 CJJ81176_1306 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000964.1 1223109 D 354242 CDS YP_001000965.1 121612451 4683344 complement(1223962..1225293) 1 NC_008787.1 biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase 1225293 accC-2 4683344 accC-2 Campylobacter jejuni subsp. jejuni 81-176 biotin carboxylase YP_001000965.1 1223962 R 354242 CDS YP_001000966.1 121613228 4682166 complement(1225295..1225750) 1 NC_008787.1 identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1225750 accB 4682166 accB Campylobacter jejuni subsp. jejuni 81-176 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001000966.1 1225295 R 354242 CDS YP_001000967.1 121612496 4683020 1225898..1226458 1 NC_008787.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1226458 dcd 4683020 dcd Campylobacter jejuni subsp. jejuni 81-176 deoxycytidine triphosphate deaminase YP_001000967.1 1225898 D 354242 CDS YP_001000968.1 121612602 4683631 1226507..1227511 1 NC_008787.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; polysaccharide biosynthesis protein 1227511 flmA 4683631 flmA Campylobacter jejuni subsp. jejuni 81-176 polysaccharide biosynthesis protein YP_001000968.1 1226507 D 354242 CDS YP_001000969.1 121613537 4682420 1227512..1228642 1 NC_008787.1 identified by match to protein family HMM PF01041; match to protein family HMM PF01212; aminotransferase 1228642 4682420 CJJ81176_1311 Campylobacter jejuni subsp. jejuni 81-176 aminotransferase YP_001000969.1 1227512 D 354242 CDS YP_001000970.1 121613729 4682105 1228635..1229393 1 NC_008787.1 hypothetical protein 1229393 4682105 CJJ81176_1312 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000970.1 1228635 D 354242 CDS YP_001000971.1 121613269 4682176 1229404..1229943 1 NC_008787.1 hypothetical protein 1229943 4682176 CJJ81176_1313 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000971.1 1229404 D 354242 CDS YP_001000972.1 121613397 4682981 complement(1229938..1230834) 1 NC_008787.1 hypothetical protein 1230834 4682981 CJJ81176_1314 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000972.1 1229938 R 354242 CDS YP_001000973.1 121612330 4682827 1230977..1231696 1 NC_008787.1 hypothetical protein 1231696 4682827 CJJ81176_1315 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000973.1 1230977 D 354242 CDS YP_001000974.1 121613095 4682351 1231701..1231928 1 NC_008787.1 hypothetical protein 1231928 4682351 CJJ81176_1316 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000974.1 1231701 D 354242 CDS YP_001000975.1 121613057 4683185 1231921..1233279 1 NC_008787.1 hypothetical protein 1233279 4683185 CJJ81176_1317 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000975.1 1231921 D 354242 CDS YP_001000976.1 121612901 4683235 1233276..1234838 1 NC_008787.1 identified by match to protein family HMM TIGR01681; match to protein family HMM TIGR01686; HAD family phosphatase 1234838 4683235 CJJ81176_1318 Campylobacter jejuni subsp. jejuni 81-176 HAD family phosphatase YP_001000976.1 1233276 D 354242 CDS YP_001000977.1 121613632 4683429 1234828..1235889 1 NC_008787.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; paralogs which do not contain the N-X-R ACP-binding site motif; 3-oxoacyl-(acyl carrier protein) synthase III 1235889 4683429 CJJ81176_1319 Campylobacter jejuni subsp. jejuni 81-176 3-oxoacyl-(acyl carrier protein) synthase III YP_001000977.1 1234828 D 354242 CDS YP_001000978.1 121612726 4683513 1235889..1236110 1 NC_008787.1 acyl carrier protein, putative 1236110 4683513 CJJ81176_1320 Campylobacter jejuni subsp. jejuni 81-176 acyl carrier protein, putative YP_001000978.1 1235889 D 354242 CDS YP_001000979.1 121612586 4683635 complement(1236124..1236702) 1 NC_008787.1 hypothetical protein 1236702 4683635 CJJ81176_1321 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000979.1 1236124 R 354242 CDS YP_001000980.1 121613460 4682614 1237399..1238910 1 NC_008787.1 identified by match to protein family HMM PF00501; amino acid adenylation domain-containing protein 1238910 4682614 CJJ81176_1322 Campylobacter jejuni subsp. jejuni 81-176 amino acid adenylation domain-containing protein YP_001000980.1 1237399 D 354242 CDS YP_001000981.1 121613730 4682730 1239050..1239622 1 NC_008787.1 identified by match to protein family HMM PF00583; acetyltransferase 1239622 4682730 CJJ81176_1323 Campylobacter jejuni subsp. jejuni 81-176 acetyltransferase YP_001000981.1 1239050 D 354242 CDS YP_001000982.1 121612565 4682560 complement(1239639..1239812) 1 NC_008787.1 hypothetical protein 1239812 4682560 CJJ81176_1324 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000982.1 1239639 R 354242 CDS YP_001000983.1 121613121 4682851 1239899..1240309 1 NC_008787.1 formyl transferase domain-containing protein 1240309 4682851 CJJ81176_1325 Campylobacter jejuni subsp. jejuni 81-176 formyl transferase domain-containing protein YP_001000983.1 1239899 D 354242 CDS YP_001000984.1 121612298 4683134 1240312..1240536 1 NC_008787.1 acyl carrier protein, putative 1240536 4683134 CJJ81176_1326 Campylobacter jejuni subsp. jejuni 81-176 acyl carrier protein, putative YP_001000984.1 1240312 D 354242 CDS YP_001000985.1 121612770 4682434 complement(1240529..1241740) 1 NC_008787.1 hypothetical protein 1241740 4682434 CJJ81176_1327 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000985.1 1240529 R 354242 CDS YP_001000986.1 121613035 4683584 1241832..1242530 1 NC_008787.1 identified by match to protein family HMM PF00483; match to protein family HMM PF02348; acylneuraminate cytidylyltransferase 1242530 neuA 4683584 neuA Campylobacter jejuni subsp. jejuni 81-176 acylneuraminate cytidylyltransferase YP_001000986.1 1241832 D 354242 CDS YP_001000987.1 121612383 4683251 1242514..1243338 1 NC_008787.1 flagellar protein, putative 1243338 4683251 CJJ81176_1329 Campylobacter jejuni subsp. jejuni 81-176 flagellar protein, putative YP_001000987.1 1242514 D 354242 CDS YP_001000988.1 121612735 4682272 1243335..1243808 1 NC_008787.1 identified by match to protein family HMM PF00583; acetyltransferase 1243808 4682272 CJJ81176_1330 Campylobacter jejuni subsp. jejuni 81-176 acetyltransferase YP_001000988.1 1243335 D 354242 CDS YP_001000989.1 121613310 4683628 complement(1243773..1244519) 1 NC_008787.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamide and glutamine to imidazole-glycerolphosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1244519 hisF-1 4683628 hisF-1 Campylobacter jejuni subsp. jejuni 81-176 imidazole glycerol phosphate synthase subunit HisF YP_001000989.1 1243773 R 354242 CDS YP_001000990.1 121612873 4682930 complement(1244520..1245125) 1 NC_008787.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1245125 hisH 4682930 hisH Campylobacter jejuni subsp. jejuni 81-176 imidazole glycerol phosphate synthase subunit HisH YP_001000990.1 1244520 R 354242 CDS YP_001000991.1 121613681 4683449 complement(1245122..1246258) 1 NC_008787.1 flagellin modification protein, PseA 1246258 4683449 CJJ81176_1333 Campylobacter jejuni subsp. jejuni 81-176 flagellin modification protein, PseA YP_001000991.1 1245122 R 354242 CDS YP_001000992.1 121612572 4682154 1246516..1247547 1 NC_008787.1 identified by match to protein family HMM PF01354; match to protein family HMM PF03102; N-acetylneuraminic acid synthetase 1247547 neuB 4682154 neuB Campylobacter jejuni subsp. jejuni 81-176 N-acetylneuraminic acid synthetase YP_001000992.1 1246516 D 354242 CDS YP_001000993.1 121613039 4682746 1247580..1249394 1 NC_008787.1 identified by match to protein family HMM PF01973; motility accessory factor 1249394 4682746 CJJ81176_1335 Campylobacter jejuni subsp. jejuni 81-176 motility accessory factor YP_001000993.1 1247580 D 354242 CDS YP_001000994.1 121612818 4683243 1249415..1251379 1 NC_008787.1 identified by match to protein family HMM PF01973; PseD 1251379 4683243 CJJ81176_1336 Campylobacter jejuni subsp. jejuni 81-176 PseD YP_001000994.1 1249415 D 354242 CDS YP_001000995.1 121613280 4683519 1251366..1253264 1 NC_008787.1 identified by match to protein family HMM PF01973; PseE 1253264 4683519 CJJ81176_1337 Campylobacter jejuni subsp. jejuni 81-176 PseE YP_001000995.1 1251366 D 354242 CDS YP_001000996.1 121612455 4682956 complement(1253296..1255026) 1 NC_008787.1 FlaB; structural flagella protein; in Helicobacter the flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin 1255026 4682956 CJJ81176_1338 Campylobacter jejuni subsp. jejuni 81-176 flagellin YP_001000996.1 1253296 R 354242 CDS YP_001000997.1 121612545 4682159 complement(1255200..1256930) 1 NC_008787.1 FlaA; structural flagella protein; in Helicobacter the flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin 1256930 4682159 CJJ81176_1339 Campylobacter jejuni subsp. jejuni 81-176 flagellin YP_001000997.1 1255200 R 354242 CDS YP_001000998.1 121613496 4683084 complement(1257013..1258839) 1 NC_008787.1 identified by match to protein family HMM PF01973; motility accessory factor 1258839 4683084 CJJ81176_1340 Campylobacter jejuni subsp. jejuni 81-176 motility accessory factor YP_001000998.1 1257013 R 354242 CDS YP_001000999.1 121612531 4682705 complement(1258851..1260101) 1 NC_008787.1 hypothetical protein 1260101 4682705 CJJ81176_1341 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001000999.1 1258851 R 354242 CDS YP_001001000.1 121613180 4683281 complement(1260101..1260616) 1 NC_008787.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; transformation system protein 1260616 ctsG 4683281 ctsG Campylobacter jejuni subsp. jejuni 81-176 transformation system protein YP_001001000.1 1260101 R 354242 CDS YP_001001001.1 121612827 4683073 complement(1260617..1261624) 1 NC_008787.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1261624 gcp 4683073 gcp Campylobacter jejuni subsp. jejuni 81-176 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001001001.1 1260617 R 354242 CDS YP_001001002.1 121613581 4683516 complement(1261621..1263015) 1 NC_008787.1 hypothetical protein 1263015 4683516 CJJ81176_1344 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001002.1 1261621 R 354242 CDS YP_001001003.1 121612425 4682792 complement(1263017..1264087) 1 NC_008787.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1264087 dxr 4682792 dxr Campylobacter jejuni subsp. jejuni 81-176 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001001003.1 1263017 R 354242 CDS YP_001001004.1 121612968 4682207 complement(1264084..1264809) 1 NC_008787.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 1264809 cdsA 4682207 cdsA Campylobacter jejuni subsp. jejuni 81-176 phosphatidate cytidylyltransferase YP_001001004.1 1264084 R 354242 CDS YP_001001005.1 121612256 4683320 complement(1264818..1265156) 1 NC_008787.1 hypothetical protein 1265156 4683320 CJJ81176_1347 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001005.1 1264818 R 354242 CDS YP_001001006.1 121612790 4682502 complement(1265158..1266465) 1 NC_008787.1 identified by match to protein family HMM PF05670; fibronectin/fibrinogen binding protein, putative 1266465 4682502 CJJ81176_1348 Campylobacter jejuni subsp. jejuni 81-176 fibronectin/fibrinogen binding protein, putative YP_001001006.1 1265158 R 354242 CDS YP_001001007.1 121613425 4683554 1266527..1267102 1 NC_008787.1 putative molybdopterin-guanine dinucleotide biosynthesis protein 1267102 4683554 CJJ81176_1349 Campylobacter jejuni subsp. jejuni 81-176 putative molybdopterin-guanine dinucleotide biosynthesis protein YP_001001007.1 1266527 D 354242 CDS YP_001001008.1 121612571 4682765 1267099..1268088 1 NC_008787.1 identified by match to protein family HMM PF02253; phospholipase A 1268088 pldA 4682765 pldA Campylobacter jejuni subsp. jejuni 81-176 phospholipase A YP_001001008.1 1267099 D 354242 CDS YP_001001009.1 121613598 4682825 1268177..1269145 1 NC_008787.1 identified by match to protein family HMM PF01032; enterochelin ABC transporter, permease protein 1269145 ceuB 4682825 ceuB Campylobacter jejuni subsp. jejuni 81-176 enterochelin ABC transporter, permease protein YP_001001009.1 1268177 D 354242 CDS YP_001001010.1 121612419 4683374 1269138..1270076 1 NC_008787.1 identified by match to protein family HMM PF01032; enterochelin ABC transporter, permease protein 1270076 ceuC 4683374 ceuC Campylobacter jejuni subsp. jejuni 81-176 enterochelin ABC transporter, permease protein YP_001001010.1 1269138 D 354242 CDS YP_001001011.1 121613041 4682223 1270073..1270828 1 NC_008787.1 identified by match to protein family HMM PF00005; enterochelin ABC transporter, ATP-binding protein 1270828 ceuD 4682223 ceuD Campylobacter jejuni subsp. jejuni 81-176 enterochelin ABC transporter, ATP-binding protein YP_001001011.1 1270073 D 354242 CDS YP_001001012.1 121612138 4683229 1270841..1271833 1 NC_008787.1 identified by match to protein family HMM PF01497; enterochelin ABC transporter, periplasmic enterochelin-binding protein, authentic frameshift 1271833 4683229 CJJ81176_1354 Campylobacter jejuni subsp. jejuni 81-176 enterochelin ABC transporter, periplasmic enterochelin-binding protein, authentic frameshift YP_001001012.1 1270841 D 354242 CDS YP_001001013.1 121613199 4682512 1271987..1272208 1 NC_008787.1 hypothetical protein 1272208 4682512 CJJ81176_1355 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001013.1 1271987 D 354242 CDS YP_001001014.1 121612337 4683045 1272209..1272490 1 NC_008787.1 identified by match to protein family HMM PF05016; RelE/ParE family plasmid stabilization system protein 1272490 4683045 CJJ81176_1356 Campylobacter jejuni subsp. jejuni 81-176 RelE/ParE family plasmid stabilization system protein YP_001001014.1 1272209 D 354242 CDS YP_001001015.1 121613600 4682429 complement(1272850..1273404) 1 NC_008787.1 hypothetical protein 1273404 4682429 CJJ81176_1358 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001015.1 1272850 R 354242 CDS YP_001001016.1 121612669 4683776 complement(1273540..1275372) 1 NC_008787.1 identified by match to protein family HMM PF02335; cytochrome c552 1275372 nrfA 4683776 nrfA Campylobacter jejuni subsp. jejuni 81-176 cytochrome c552 YP_001001016.1 1273540 R 354242 CDS YP_001001017.1 121612120 4683709 complement(1275387..1275902) 1 NC_008787.1 identified by match to protein family HMM PF03264; match to protein family HMM TIGR03153; cytochrome c-type protein nrfH 1275902 nrfH 4683709 nrfH Campylobacter jejuni subsp. jejuni 81-176 cytochrome c-type protein nrfH YP_001001017.1 1275387 R 354242 CDS YP_001001018.1 121612893 4682449 1276090..1278174 1 NC_008787.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1278174 ppk 4682449 ppk Campylobacter jejuni subsp. jejuni 81-176 polyphosphate kinase YP_001001018.1 1276090 D 354242 CDS YP_001001019.1 121612322 4683778 complement(1278618..1279070) 1 NC_008787.1 hypothetical protein 1279070 4683778 CJJ81176_1363 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001019.1 1278618 R 354242 CDS YP_001001020.1 121612638 4682374 1279119..1280126 1 NC_008787.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1280126 ruvB 4682374 ruvB Campylobacter jejuni subsp. jejuni 81-176 Holliday junction DNA helicase RuvB YP_001001020.1 1279119 D 354242 CDS YP_001001021.1 121612486 4683732 1280130..1281173 1 NC_008787.1 identified by match to protein family HMM PF01594; hypothetical protein 1281173 4683732 CJJ81176_1365 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001021.1 1280130 D 354242 CDS YP_001001022.1 121613034 4683712 complement(1281203..1282594) 1 NC_008787.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1282594 fumC 4683712 fumC Campylobacter jejuni subsp. jejuni 81-176 fumarate hydratase YP_001001022.1 1281203 R 354242 CDS YP_001001023.1 121613392 4683250 complement(1282650..1285775) 1 NC_008787.1 identified by match to protein family HMM PF00082; match to protein family HMM PF03797; match to protein family HMM TIGR02601; serine protease 1285775 4683250 CJJ81176_1367 Campylobacter jejuni subsp. jejuni 81-176 serine protease YP_001001023.1 1282650 R 354242 CDS YP_001001024.1 121613200 4682820 complement(1285778..1287574) 1 NC_008787.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1287574 glmS 4682820 glmS Campylobacter jejuni subsp. jejuni 81-176 glucosamine--fructose-6-phosphate aminotransferase YP_001001024.1 1285778 R 354242 CDS YP_001001025.1 121612909 4683053 complement(1287579..1289927) 1 NC_008787.1 GlnD family protein 1289927 4683053 CJJ81176_1369 Campylobacter jejuni subsp. jejuni 81-176 GlnD family protein YP_001001025.1 1287579 R 354242 CDS YP_001001026.1 121613371 4683405 1290071..1291135 1 NC_008787.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; hypothetical protein 1291135 4683405 CJJ81176_1370 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001026.1 1290071 D 354242 CDS YP_001001027.1 121612287 4682857 1291197..1294562 1 NC_008787.1 identified by match to protein family HMM PF00082; match to protein family HMM PF03797; match to protein family HMM TIGR01414; match to protein family HMM TIGR02601; serine protease 1294562 4682857 CJJ81176_1371 Campylobacter jejuni subsp. jejuni 81-176 serine protease YP_001001027.1 1291197 D 354242 CDS YP_001001028.1 121613573 4682448 1294609..1295928 1 NC_008787.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease family protein 1295928 4682448 CJJ81176_1372 Campylobacter jejuni subsp. jejuni 81-176 xanthine/uracil permease family protein YP_001001028.1 1294609 D 354242 CDS YP_001001029.1 121613357 4682531 1295942..1296385 1 NC_008787.1 identified by match to protein family HMM PF00156; putative nucleotide phosphoribosyltransferase 1296385 4682531 CJJ81176_1373 Campylobacter jejuni subsp. jejuni 81-176 putative nucleotide phosphoribosyltransferase YP_001001029.1 1295942 D 354242 CDS YP_001001030.1 121612775 4682875 1296430..1297128 1 NC_008787.1 identified by match to protein family HMM PF04333; VacJ family lipoprotein 1297128 4682875 CJJ81176_1374 Campylobacter jejuni subsp. jejuni 81-176 VacJ family lipoprotein YP_001001030.1 1296430 D 354242 CDS YP_001001031.1 121613470 4683575 1297138..1297707 1 NC_008787.1 identified by match to protein family HMM PF05494; toluene tolerance protein, putative 1297707 4683575 CJJ81176_1375 Campylobacter jejuni subsp. jejuni 81-176 toluene tolerance protein, putative YP_001001031.1 1297138 D 354242 CDS YP_001001032.1 121612555 4683006 1297707..1300178 1 NC_008787.1 identified by match to protein family HMM PF02460; hypothetical protein 1300178 4683006 CJJ81176_1376 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001032.1 1297707 D 354242 CDS YP_001001033.1 121613483 4683009 complement(1300209..1300811) 1 NC_008787.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 1300811 4683009 CJJ81176_1377 Campylobacter jejuni subsp. jejuni 81-176 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001001033.1 1300209 R 354242 CDS YP_001001034.1 121612900 4683485 1300978..1302279 1 NC_008787.1 identified by match to protein family HMM PF07690; multidrug resistance efflux transporter, putative 1302279 4683485 CJJ81176_1378 Campylobacter jejuni subsp. jejuni 81-176 multidrug resistance efflux transporter, putative YP_001001034.1 1300978 D 354242 CDS YP_001001035.1 121612915 4683428 complement(1302282..1303955) 1 NC_008787.1 identified by match to protein family HMM PF00037; iron-sulfur cluster-binding domain-containing protein 1303955 4683428 CJJ81176_1379 Campylobacter jejuni subsp. jejuni 81-176 iron-sulfur cluster-binding domain-containing protein YP_001001035.1 1302282 R 354242 CDS YP_001001036.1 121612972 4683510 1304033..1305355 1 NC_008787.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 1305355 selA 4683510 selA Campylobacter jejuni subsp. jejuni 81-176 selenocysteine synthase YP_001001036.1 1304033 D 354242 CDS YP_001001037.1 121612252 4683324 1305352..1307157 1 NC_008787.1 identified by match to protein family HMM PF00009; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475; selenocysteine-specific elongation factor 1307157 selB 4683324 selB Campylobacter jejuni subsp. jejuni 81-176 selenocysteine-specific elongation factor YP_001001037.1 1305352 D 354242 CDS YP_001001038.1 121613150 4683768 1307206..1307916 1 NC_008787.1 hypothetical protein 1307916 4683768 CJJ81176_1382 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001038.1 1307206 D 354242 CDS YP_001001039.1 121613157 4683113 1307922..1308473 1 NC_008787.1 putative lipoprotein 1308473 4683113 CJJ81176_1383 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001001039.1 1307922 D 354242 CDS YP_001001040.1 121612349 4683088 complement(1308496..1308987) 1 NC_008787.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 1308987 fldA 4683088 fldA Campylobacter jejuni subsp. jejuni 81-176 flavodoxin FldA YP_001001040.1 1308496 R 354242 CDS YP_001001041.1 121613639 4682330 complement(1308987..1309682) 1 NC_008787.1 hypothetical protein 1309682 4682330 CJJ81176_1385 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001041.1 1308987 R 354242 CDS YP_001001042.1 121612297 4682118 complement(1309685..1309999) 1 NC_008787.1 hypothetical protein 1309999 4682118 CJJ81176_1386 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001042.1 1309685 R 354242 CDS YP_001001043.1 121612952 4682552 1310170..1311594 1 NC_008787.1 identified by match to protein family HMM PF00199; catalase 1311594 katA 4682552 katA Campylobacter jejuni subsp. jejuni 81-176 catalase YP_001001043.1 1310170 D 354242 CDS YP_001001044.1 121612500 4683342 1311651..1312121 1 NC_008787.1 identified by match to protein family HMM PF00023; ankyrin repeat-containing protein 1312121 4683342 CJJ81176_1388 Campylobacter jejuni subsp. jejuni 81-176 ankyrin repeat-containing protein YP_001001044.1 1311651 D 354242 CDS YP_001001045.1 121612490 4683586 complement(1312122..1312778) 1 NC_008787.1 hypothetical protein 1312778 4683586 CJJ81176_1389 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001045.1 1312122 R 354242 CDS YP_001001046.1 121613179 4683734 1312946..1313308 1 NC_008787.1 identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP, putative 1313308 4683734 CJJ81176_1390 Campylobacter jejuni subsp. jejuni 81-176 endoribonuclease L-PSP, putative YP_001001046.1 1312946 D 354242 CDS YP_001001047.1 121613618 4683078 1313312..1314751 1 NC_008787.1 identified by match to protein family HMM PF03606; match to protein family HMM TIGR00771; cryptic C4-dicarboxylate transporter DcuD, authentic frameshift 1314751 4683078 CJJ81176_1391 Campylobacter jejuni subsp. jejuni 81-176 cryptic C4-dicarboxylate transporter DcuD, authentic frameshift YP_001001047.1 1313312 D 354242 CDS YP_001001048.1 121612883 4683766 1314764..1315927 1 NC_008787.1 identified by match to protein family HMM PF01053; cystathionine beta-lyase 1315927 metC 4683766 metC Campylobacter jejuni subsp. jejuni 81-176 cystathionine beta-lyase YP_001001048.1 1314764 D 354242 CDS YP_001001049.1 121612871 4683439 1315937..1317304 1 NC_008787.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1317304 purB-2 4683439 purB-2 Campylobacter jejuni subsp. jejuni 81-176 adenylosuccinate lyase YP_001001049.1 1315937 D 354242 CDS YP_001001050.1 121613670 4683453 1317313..1318653 1 NC_008787.1 identified by match to protein family HMM PF03972; MmgE/PrpD family protein 1318653 4683453 CJJ81176_1394 Campylobacter jejuni subsp. jejuni 81-176 MmgE/PrpD family protein YP_001001050.1 1317313 D 354242 CDS YP_001001051.1 121613152 4683272 1318846..1318959 1 NC_008787.1 feoA family protein 1318959 4683272 CJJ81176_1395 Campylobacter jejuni subsp. jejuni 81-176 feoA family protein YP_001001051.1 1318846 D 354242 CDS YP_001001052.1 121613472 4683135 1318956..1319714 1 NC_008787.1 identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650; ferrous iron transport protein B, authentic frameshift 1319714 4683135 CJJ81176_1396 Campylobacter jejuni subsp. jejuni 81-176 ferrous iron transport protein B, authentic frameshift YP_001001052.1 1318956 D 354242 CDS YP_001001053.1 121613642 4683434 1319689..1320798 1 NC_008787.1 identified by match to protein family HMM PF07664; match to protein family HMM PF07670; ferrous iron transport protein B 1320798 feoB 4683434 feoB Campylobacter jejuni subsp. jejuni 81-176 ferrous iron transport protein B YP_001001053.1 1319689 D 354242 CDS YP_001001054.1 121612559 4682337 complement(1320795..1322288) 1 NC_008787.1 identified by match to protein family HMM PF01058; match to protein family HMM TIGR00391; hydrogenase, (NiFe)/(NiFeSe) small subunit family 1322288 4682337 CJJ81176_1398 Campylobacter jejuni subsp. jejuni 81-176 hydrogenase, (NiFe)/(NiFeSe) small subunit family YP_001001054.1 1320795 R 354242 CDS YP_001001055.1 121613563 4682889 complement(1322292..1323116) 1 NC_008787.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 1323116 fabI 4682889 fabI Campylobacter jejuni subsp. jejuni 81-176 enoyl-(acyl carrier protein) reductase YP_001001055.1 1322292 R 354242 CDS YP_001001056.1 121612231 4682527 complement(1323120..1323791) 1 NC_008787.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1323791 tpiA 4682527 tpiA Campylobacter jejuni subsp. jejuni 81-176 triosephosphate isomerase YP_001001056.1 1323120 R 354242 CDS YP_001001057.1 121613033 4682569 complement(1323788..1324990) 1 NC_008787.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1324990 pgk 4682569 pgk Campylobacter jejuni subsp. jejuni 81-176 phosphoglycerate kinase YP_001001057.1 1323788 R 354242 CDS YP_001001058.1 121612463 4683253 complement(1324993..1325991) 1 NC_008787.1 identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde 3-phosphate dehydrogenase A 1325991 gapA 4683253 gapA Campylobacter jejuni subsp. jejuni 81-176 glyceraldehyde 3-phosphate dehydrogenase A YP_001001058.1 1324993 R 354242 CDS YP_001001059.1 121613461 4682144 1326051..1326596 1 NC_008787.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate (nicotinamide) nucleotide adenylyltransferase 1326596 nadD 4682144 nadD Campylobacter jejuni subsp. jejuni 81-176 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001001059.1 1326051 D 354242 CDS YP_001001060.1 121612776 4682731 1326624..1326950 1 NC_008787.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; hypothetical protein 1326950 4682731 CJJ81176_1404 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001060.1 1326624 D 354242 CDS YP_001001061.1 121613469 4683570 complement(1326983..1327360) 1 NC_008787.1 identified by match to protein family HMM PF06476; hypothetical protein 1327360 4683570 CJJ81176_1405 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001061.1 1326983 R 354242 CDS YP_001001062.1 121612913 4682855 complement(1327407..1328777) 1 NC_008787.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphomannomutase/phosphoglucomutase 1328777 algC 4682855 algC Campylobacter jejuni subsp. jejuni 81-176 phosphomannomutase/phosphoglucomutase YP_001001062.1 1327407 R 354242 CDS YP_001001063.1 121613276 4683397 1328899..1329435 1 NC_008787.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1329435 fliL 4683397 fliL Campylobacter jejuni subsp. jejuni 81-176 flagellar basal body-associated protein FliL YP_001001063.1 1328899 D 354242 CDS YP_001001064.1 121612343 4682970 1329435..1329782 1 NC_008787.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1329782 acpS 4682970 acpS Campylobacter jejuni subsp. jejuni 81-176 4'-phosphopantetheinyl transferase YP_001001064.1 1329435 D 354242 CDS YP_001001065.1 121613572 4682328 complement(1329783..1330202) 1 NC_008787.1 hypothetical protein 1330202 4682328 CJJ81176_1409 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001065.1 1329783 R 354242 CDS YP_001001066.1 121612828 4682530 complement(1330199..1331560) 1 NC_008787.1 identified by match to protein family HMM PF00067; cytochrome P450 family protein 1331560 4682530 CJJ81176_1410 Campylobacter jejuni subsp. jejuni 81-176 cytochrome P450 family protein YP_001001066.1 1330199 R 354242 CDS YP_001001067.1 121612145 4683507 complement(1331557..1332678) 1 NC_008787.1 hypothetical protein 1332678 4683507 CJJ81176_1411 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001067.1 1331557 R 354242 CDS YP_001001068.1 121613000 4682675 complement(1332750..1333934) 1 NC_008787.1 identified by match to protein family HMM PF05159; capsule polysaccharide export protein KpsS 1333934 kpsS 4682675 kpsS Campylobacter jejuni subsp. jejuni 81-176 capsule polysaccharide export protein KpsS YP_001001068.1 1332750 R 354242 CDS YP_001001069.1 121612738 4683284 complement(1333931..1336000) 1 NC_008787.1 identified by match to protein family HMM PF05159; capsule polysaccharide export protein KpsC 1336000 kpsC 4683284 kpsC Campylobacter jejuni subsp. jejuni 81-176 capsule polysaccharide export protein KpsC YP_001001069.1 1333931 R 354242 CDS YP_001001070.1 121612544 4683612 complement(1335997..1336509) 1 NC_008787.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 1336509 4683612 CJJ81176_1414 Campylobacter jejuni subsp. jejuni 81-176 adenylylsulfate kinase YP_001001070.1 1335997 R 354242 CDS YP_001001071.1 121612342 4683083 complement(1336499..1337260) 1 NC_008787.1 identified by match to protein family HMM PF00483; putative sugar-1-phosphate nucleotidyltransferase 1337260 4683083 CJJ81176_1415 Campylobacter jejuni subsp. jejuni 81-176 putative sugar-1-phosphate nucleotidyltransferase YP_001001071.1 1336499 R 354242 CDS YP_001001072.1 121613268 4682327 complement(1337262..1337864) 1 NC_008787.1 identified by match to protein family HMM PF00117; class I glutamine amidotransferase, putative 1337864 4682327 CJJ81176_1416 Campylobacter jejuni subsp. jejuni 81-176 class I glutamine amidotransferase, putative YP_001001072.1 1337262 R 354242 CDS YP_001001073.1 121613703 4682980 complement(1337855..1340194) 1 NC_008787.1 hypothetical protein 1340194 4682980 CJJ81176_1417 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001073.1 1337855 R 354242 CDS YP_001001074.1 121613113 4682293 complement(1340209..1340988) 1 NC_008787.1 identified by match to protein family HMM PF01209; putative methyltransferase 1340988 4682293 CJJ81176_1418 Campylobacter jejuni subsp. jejuni 81-176 putative methyltransferase YP_001001074.1 1340209 R 354242 CDS YP_001001075.1 121613209 4683152 complement(1341022..1341795) 1 NC_008787.1 putative methyltransferase 1341795 4683152 CJJ81176_1419 Campylobacter jejuni subsp. jejuni 81-176 putative methyltransferase YP_001001075.1 1341022 R 354242 CDS YP_001001076.1 121612443 4683043 complement(1341847..1343541) 1 NC_008787.1 putative sugar transferase 1343541 4683043 CJJ81176_1420 Campylobacter jejuni subsp. jejuni 81-176 putative sugar transferase YP_001001076.1 1341847 R 354242 CDS YP_001001077.1 121612978 4682181 complement(1343513..1343626) 1 NC_008787.1 putative glycosyltransferase 1343626 4682181 CJJ81176_1421 Campylobacter jejuni subsp. jejuni 81-176 putative glycosyltransferase YP_001001077.1 1343513 R 354242 CDS YP_001001078.1 121612248 4683316 complement(1343639..1344313) 1 NC_008787.1 identified by match to protein family HMM PF00483; capsular biosynthesis nucleotidyltransferase, putative 1344313 4683316 CJJ81176_1422 Campylobacter jejuni subsp. jejuni 81-176 capsular biosynthesis nucleotidyltransferase, putative YP_001001078.1 1343639 R 354242 CDS YP_001001079.1 121612743 4682119 complement(1344301..1344906) 1 NC_008787.1 identified by match to protein family HMM TIGR00441; phosphoheptose isomerase 1344906 gmhA-2 4682119 gmhA-2 Campylobacter jejuni subsp. jejuni 81-176 phosphoheptose isomerase YP_001001079.1 1344301 R 354242 CDS YP_001001080.1 121613167 4683601 complement(1344894..1345913) 1 NC_008787.1 identified by match to protein family HMM PF00288; capsular biosynthesis sugar kinase, putative 1345913 4683601 CJJ81176_1424 Campylobacter jejuni subsp. jejuni 81-176 capsular biosynthesis sugar kinase, putative YP_001001080.1 1344894 R 354242 CDS YP_001001081.1 121612642 4683092 complement(1345988..1346926) 1 NC_008787.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; HrEpiB 1346926 4683092 CJJ81176_1425 Campylobacter jejuni subsp. jejuni 81-176 HrEpiB YP_001001081.1 1345988 R 354242 CDS YP_001001082.1 121613306 4683738 complement(1346950..1347984) 1 NC_008787.1 identified by match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; GDP-mannose 4,6-dehydratase 1347984 wcbK 4683738 wcbK Campylobacter jejuni subsp. jejuni 81-176 GDP-mannose 4,6-dehydratase YP_001001082.1 1346950 R 354242 CDS YP_001001083.1 121612894 4682946 complement(1347993..1349051) 1 NC_008787.1 identified by match to protein family HMM PF01370; GDP-fucose synthetase 1349051 fcl 4682946 fcl Campylobacter jejuni subsp. jejuni 81-176 GDP-fucose synthetase YP_001001083.1 1347993 R 354242 CDS YP_001001084.1 121613653 4683426 complement(1349061..1349681) 1 NC_008787.1 hypothetical protein 1349681 4683426 CJJ81176_1428 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001084.1 1349061 R 354242 CDS YP_001001085.1 121613060 4682843 complement(1349668..1349985) 1 NC_008787.1 hypothetical protein 1349985 4682843 CJJ81176_1429 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001085.1 1349668 R 354242 CDS YP_001001086.1 121612136 4683260 complement(1349988..1350533) 1 NC_008787.1 identified by match to protein family HMM PF00908; putative nucleotide-sugar epimerase-dehydratase 1350533 4683260 CJJ81176_1430 Campylobacter jejuni subsp. jejuni 81-176 putative nucleotide-sugar epimerase-dehydratase YP_001001086.1 1349988 R 354242 CDS YP_001001087.1 121613464 4682504 complement(1350533..1352233) 1 NC_008787.1 putative sugar transferase 1352233 4682504 CJJ81176_1431 Campylobacter jejuni subsp. jejuni 81-176 putative sugar transferase YP_001001087.1 1350533 R 354242 CDS YP_001001088.1 121612513 4682942 complement(1352230..1353939) 1 NC_008787.1 identified by match to protein family HMM PF00535; galactosyltransferase 1353939 4682942 CJJ81176_1432 Campylobacter jejuni subsp. jejuni 81-176 galactosyltransferase YP_001001088.1 1352230 R 354242 CDS YP_001001089.1 121613701 4683457 complement(1353945..1355426) 1 NC_008787.1 identified by match to protein family HMM PF00535; putative sugar transferase 1355426 4683457 CJJ81176_1433 Campylobacter jejuni subsp. jejuni 81-176 putative sugar transferase YP_001001089.1 1353945 R 354242 CDS YP_001001090.1 121612235 4682373 complement(1355432..1356637) 1 NC_008787.1 identified by match to protein family HMM PF01501; putative sugar transferase 1356637 4682373 CJJ81176_1434 Campylobacter jejuni subsp. jejuni 81-176 putative sugar transferase YP_001001090.1 1355432 R 354242 CDS YP_001001091.1 121612834 4682544 complement(1356648..1358459) 1 NC_008787.1 putative sugar transferase 1358459 4682544 CJJ81176_1435 Campylobacter jejuni subsp. jejuni 81-176 putative sugar transferase YP_001001091.1 1356648 R 354242 CDS YP_001001092.1 121612127 4683497 complement(1358452..1360632) 1 NC_008787.1 identified by match to protein family HMM PF05159; putative glycosyl transferase 1360632 4683497 CJJ81176_1436 Campylobacter jejuni subsp. jejuni 81-176 putative glycosyl transferase YP_001001092.1 1358452 R 354242 CDS YP_001001093.1 121612774 4682462 complement(1360629..1361576) 1 NC_008787.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; arabinose-5-phosphate isomerase 1361576 kpsF 4682462 kpsF Campylobacter jejuni subsp. jejuni 81-176 arabinose-5-phosphate isomerase YP_001001093.1 1360629 R 354242 CDS YP_001001094.1 121613488 4683574 complement(1361586..1363244) 1 NC_008787.1 identified by match to protein family HMM PF02563; capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein 1363244 kpsD 4683574 kpsD Campylobacter jejuni subsp. jejuni 81-176 capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein YP_001001094.1 1361586 R 354242 CDS YP_001001095.1 121613353 4682716 complement(1363246..1364364) 1 NC_008787.1 identified by match to protein family HMM PF02706; capsular polysaccharide ABC transporter 1364364 kpsE 4682716 kpsE Campylobacter jejuni subsp. jejuni 81-176 capsular polysaccharide ABC transporter YP_001001095.1 1363246 R 354242 CDS YP_001001096.1 121612633 4682871 complement(1364364..1365026) 1 NC_008787.1 identified by match to protein family HMM PF00005; capsular polysaccharide ABC transporter, ATP-binding protein 1365026 kpsT 4682871 kpsT Campylobacter jejuni subsp. jejuni 81-176 capsular polysaccharide ABC transporter, ATP-binding protein YP_001001096.1 1364364 R 354242 CDS YP_001001097.1 121613575 4683743 complement(1365023..1365805) 1 NC_008787.1 identified by match to protein family HMM PF01061; capsular polysaccharide ABC transporter, permease protein 1365805 kpsM 4683743 kpsM Campylobacter jejuni subsp. jejuni 81-176 capsular polysaccharide ABC transporter, permease protein YP_001001097.1 1365023 R 354242 CDS YP_001001098.1 121612868 4682794 complement(1365877..1366284) 1 NC_008787.1 hypothetical protein 1366284 4682794 CJJ81176_1442 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001098.1 1365877 R 354242 CDS YP_001001099.1 121612144 4683458 1366359..1366922 1 NC_008787.1 hypothetical protein 1366922 4683458 CJJ81176_1443 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001099.1 1366359 D 354242 CDS YP_001001100.1 121612582 4682674 1366958..1367647 1 NC_008787.1 deoxyuridine triphosphatase domain-containing protein 1367647 4682674 CJJ81176_1444 Campylobacter jejuni subsp. jejuni 81-176 deoxyuridine triphosphatase domain-containing protein YP_001001100.1 1366958 D 354242 CDS YP_001001101.1 121612728 4682586 1367649..1368362 1 NC_008787.1 identified by match to protein family HMM PF04401; hypothetical protein 1368362 4682586 CJJ81176_1445 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001101.1 1367649 D 354242 CDS YP_001001102.1 121613548 4683625 complement(1368345..1369310) 1 NC_008787.1 identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; tRNA(Ile)-lysidine synthetase 1369310 tilS 4683625 tilS Campylobacter jejuni subsp. jejuni 81-176 tRNA(Ile)-lysidine synthetase YP_001001102.1 1368345 R 354242 CDS YP_001001103.1 121613708 4682108 complement(1369300..1370619) 1 NC_008787.1 identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; putative tRNA modifying protein 1370619 yliG 4682108 yliG Campylobacter jejuni subsp. jejuni 81-176 putative tRNA modifying protein YP_001001103.1 1369300 R 354242 CDS YP_001001104.1 121612135 4682409 1370693..1371790 1 NC_008787.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 1371790 prfB 4682409 prfB Campylobacter jejuni subsp. jejuni 81-176 peptide chain release factor 2 YP_001001104.1 1370693 D 354242 CDS YP_001001105.1 121613197 4682499 complement(1371947..1372126) 1 NC_008787.1 hypothetical protein 1372126 4682499 CJJ81176_1449 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001105.1 1371947 R 354242 CDS YP_001001106.1 121612519 4683064 complement(1372383..1373501) 1 NC_008787.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 1373501 truD 4683064 truD Campylobacter jejuni subsp. jejuni 81-176 tRNA pseudouridine synthase D YP_001001106.1 1372383 R 354242 CDS YP_001001107.1 121613141 4683347 complement(1373470..1374291) 1 NC_008787.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1374291 4683347 CJJ81176_1451 Campylobacter jejuni subsp. jejuni 81-176 thiamine monophosphate kinase YP_001001107.1 1373470 R 354242 CDS YP_001001108.1 121612601 4683203 1374378..1375451 1 NC_008787.1 hypothetical protein 1375451 4683203 CJJ81176_1452 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001108.1 1374378 D 354242 CDS YP_001001109.1 121613721 4682396 1375448..1375831 1 NC_008787.1 hypothetical protein 1375831 4682396 CJJ81176_1453 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001109.1 1375448 D 354242 CDS YP_001001110.1 121612964 4682303 1375821..1376507 1 NC_008787.1 identified by match to protein family HMM PF03602; site-specific DNA methyltransferase, putative 1376507 4682303 CJJ81176_1454 Campylobacter jejuni subsp. jejuni 81-176 site-specific DNA methyltransferase, putative YP_001001110.1 1375821 D 354242 CDS YP_001001111.1 121613533 4683332 1376566..1377612 1 NC_008787.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1377612 flgI 4683332 flgI Campylobacter jejuni subsp. jejuni 81-176 flagellar basal body P-ring protein YP_001001111.1 1376566 D 354242 CDS YP_001001112.1 121612435 4682095 1377612..1377953 1 NC_008787.1 hypothetical protein 1377953 4682095 CJJ81176_1456 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001112.1 1377612 D 354242 CDS YP_001001113.1 121613714 4682189 1378016..1378213 1 NC_008787.1 hypothetical protein 1378213 4682189 CJJ81176_1457 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001113.1 1378016 D 354242 CDS YP_001001114.1 121612595 4682491 1378256..1378690 1 NC_008787.1 hypothetical protein 1378690 4682491 CJJ81176_1458 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001114.1 1378256 D 354242 CDS YP_001001115.1 121612872 4682126 1378700..1380526 1 NC_008787.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 1380526 flgK 4682126 flgK Campylobacter jejuni subsp. jejuni 81-176 flagellar hook-associated protein FlgK YP_001001115.1 1378700 D 354242 CDS YP_001001116.1 121613668 4683448 1380543..1381076 1 NC_008787.1 identified by match to protein family HMM TIGR02757; hypothetical protein 1381076 4683448 CJJ81176_1460 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001116.1 1380543 D 354242 CDS YP_001001117.1 121612980 4682672 1381066..1381299 1 NC_008787.1 hypothetical protein 1381299 4682672 CJJ81176_1461 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001117.1 1381066 D 354242 CDS YP_001001118.1 121612274 4683322 1381310..1382074 1 NC_008787.1 identified by match to protein family HMM PF01925; hypothetical protein 1382074 4683322 CJJ81176_1462 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001118.1 1381310 D 354242 CDS YP_001001119.1 121612272 4682471 complement(1382071..1383249) 1 NC_008787.1 identified by match to protein family HMM PF00482; general secretory pathway protein F 1383249 ctsF 4682471 ctsF Campylobacter jejuni subsp. jejuni 81-176 general secretory pathway protein F YP_001001119.1 1382071 R 354242 CDS YP_001001120.1 121612612 4682467 complement(1383246..1384805) 1 NC_008787.1 identified by match to protein family HMM PF00437; general secretory pathway protein E 1384805 ctsE 4682467 ctsE Campylobacter jejuni subsp. jejuni 81-176 general secretory pathway protein E YP_001001120.1 1383246 R 354242 CDS YP_001001121.1 121612126 4682273 complement(1384795..1385382) 1 NC_008787.1 transformation system protein 1385382 ctsX 4682273 ctsX Campylobacter jejuni subsp. jejuni 81-176 transformation system protein YP_001001121.1 1384795 R 354242 CDS YP_001001122.1 121613067 4682461 complement(1385386..1385994) 1 NC_008787.1 transformation system protein 1385994 ctsP 4682461 ctsP Campylobacter jejuni subsp. jejuni 81-176 transformation system protein YP_001001122.1 1385386 R 354242 CDS YP_001001123.1 121613593 4683211 complement(1385987..1387399) 1 NC_008787.1 identified by match to protein family HMM PF00263; match to protein family HMM PF07655; match to protein family HMM PF07660; match to protein family HMM TIGR02519; general secretory pathway protein D 1387399 ctsD 4683211 ctsD Campylobacter jejuni subsp. jejuni 81-176 general secretory pathway protein D YP_001001123.1 1385987 R 354242 CDS YP_001001124.1 121612849 4683365 complement(1387377..1387688) 1 NC_008787.1 transformation system protein 1387688 ctsR 4683365 ctsR Campylobacter jejuni subsp. jejuni 81-176 transformation system protein YP_001001124.1 1387377 R 354242 CDS YP_001001125.1 121613446 4683518 complement(1387712..1391272) 1 NC_008787.1 identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate ferredoxin/flavodoxin oxidoreductase 1391272 4683518 CJJ81176_1469 Campylobacter jejuni subsp. jejuni 81-176 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001001125.1 1387712 R 354242 CDS YP_001001126.1 121612771 4682750 complement(1391365..1392006) 1 NC_008787.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; HAD-superfamily hydrolase, subfamily IA, variant 1 family protein 1392006 4682750 CJJ81176_1470 Campylobacter jejuni subsp. jejuni 81-176 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein YP_001001126.1 1391365 R 354242 CDS YP_001001127.1 121612147 4683585 complement(1392006..1392965) 1 NC_008787.1 identified by match to protein family HMM PF00691; match to protein family HMM PF01389; fibronectin-binding protein 1392965 cadF 4683585 cadF Campylobacter jejuni subsp. jejuni 81-176 fibronectin-binding protein YP_001001127.1 1392006 R 354242 CDS YP_001001128.1 121613604 4682563 complement(1393091..1393480) 1 NC_008787.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1393480 rpsI 4682563 rpsI Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S9 YP_001001128.1 1393091 R 354242 CDS YP_001001129.1 121612364 4683770 complement(1393483..1393926) 1 NC_008787.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1393926 rplM 4683770 rplM Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L13 YP_001001129.1 1393483 R 354242 CDS YP_001001130.1 121612796 4682300 complement(1393992..1396757) 1 NC_008787.1 identified by match to protein family HMM PF00580; putative recombination protein RecB 1396757 4682300 CJJ81176_1474 Campylobacter jejuni subsp. jejuni 81-176 putative recombination protein RecB YP_001001130.1 1393992 R 354242 CDS YP_001001131.1 121613506 4683556 complement(1396754..1399120) 1 NC_008787.1 hypothetical protein 1399120 4683556 CJJ81176_1475 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001131.1 1396754 R 354242 CDS YP_001001132.1 121613305 4682697 complement(1399117..1399638) 1 NC_008787.1 putative lipoprotein 1399638 4682697 CJJ81176_1476 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001001132.1 1399117 R 354242 CDS YP_001001133.1 121612319 4682927 complement(1399625..1400227) 1 NC_008787.1 hypothetical protein 1400227 4682927 CJJ81176_1477 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001133.1 1399625 R 354242 CDS YP_001001134.1 121612348 4682379 complement(1400322..1400540) 1 NC_008787.1 hypothetical protein 1400540 4682379 CJJ81176_1478 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001134.1 1400322 R 354242 CDS YP_001001135.1 121613252 4682329 complement(1400540..1401403) 1 NC_008787.1 identified by match to protein family HMM PF00034; match to protein family HMM TIGR00782; cytochrome c oxidase, cbb3-type, subunit III 1401403 ccoP 4682329 ccoP Campylobacter jejuni subsp. jejuni 81-176 cytochrome c oxidase, cbb3-type, subunit III YP_001001135.1 1400540 R 354242 CDS YP_001001136.1 121612902 4682998 complement(1401403..1401669) 1 NC_008787.1 identified by match to protein family HMM TIGR02736; cytochrome c oxidase, cbb3-type, subunit IV 1401669 ccoQ 4682998 ccoQ Campylobacter jejuni subsp. jejuni 81-176 cytochrome c oxidase, cbb3-type, subunit IV YP_001001136.1 1401403 R 354242 CDS YP_001001137.1 121613685 4683420 complement(1401671..1402336) 1 NC_008787.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1402336 ccoO 4683420 ccoO Campylobacter jejuni subsp. jejuni 81-176 cbb3-type cytochrome c oxidase subunit II YP_001001137.1 1401671 R 354242 CDS YP_001001138.1 121612472 4682278 complement(1402349..1403815) 1 NC_008787.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1403815 ccoN 4682278 ccoN Campylobacter jejuni subsp. jejuni 81-176 cbb3-type cytochrome c oxidase subunit I YP_001001138.1 1402349 R 354242 CDS YP_001001139.1 121612550 4682082 complement(1403941..1404621) 1 NC_008787.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1404621 4682082 CJJ81176_1483 Campylobacter jejuni subsp. jejuni 81-176 DNA-binding response regulator YP_001001139.1 1403941 R 354242 CDS YP_001001140.1 121612611 4682978 complement(1404624..1405835) 1 NC_008787.1 identified by match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box sensor histidine kinase, putative 1405835 4682978 CJJ81176_1484 Campylobacter jejuni subsp. jejuni 81-176 sensory box sensor histidine kinase, putative YP_001001140.1 1404624 R 354242 CDS YP_001001141.1 121613738 4682324 complement(1405832..1406491) 1 NC_008787.1 hypothetical protein 1406491 4682324 CJJ81176_1485 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001141.1 1405832 R 354242 CDS YP_001001142.1 121612786 4682315 complement(1406488..1407606) 1 NC_008787.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1407606 carA 4682315 carA Campylobacter jejuni subsp. jejuni 81-176 carbamoyl phosphate synthase small subunit YP_001001142.1 1406488 R 354242 CDS YP_001001143.1 121612238 4683550 complement(1407606..1408157) 1 NC_008787.1 identified by match to protein family HMM PF04368; hypothetical protein 1408157 4683550 CJJ81176_1487 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001143.1 1407606 R 354242 CDS YP_001001144.1 121613093 4682535 complement(1408250..1408768) 1 NC_008787.1 hypothetical protein 1408768 4682535 CJJ81176_1488 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001144.1 1408250 R 354242 CDS YP_001001145.1 121613610 4683180 complement(1408761..1409042) 1 NC_008787.1 hypothetical protein 1409042 4683180 CJJ81176_1489 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001145.1 1408761 R 354242 CDS YP_001001146.1 121612533 4682127 complement(1409186..1410436) 1 NC_008787.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1410436 purA 4682127 purA Campylobacter jejuni subsp. jejuni 81-176 adenylosuccinate synthetase YP_001001146.1 1409186 R 354242 CDS YP_001001147.1 121613475 4682646 1410701..1411909 1 NC_008787.1 identified by match to protein family HMM PF04143; putative inner membrane protein 1411909 4682646 CJJ81176_1492 Campylobacter jejuni subsp. jejuni 81-176 putative inner membrane protein YP_001001147.1 1410701 D 354242 CDS YP_001001148.1 121612372 4682725 1411913..1412140 1 NC_008787.1 identified by match to protein family HMM PF01206; hypothetical protein 1412140 4682725 CJJ81176_1493 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001148.1 1411913 D 354242 CDS YP_001001149.1 121613068 4682290 complement(1412156..1413625) 1 NC_008787.1 identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02121; sodium/proline permease 1413625 putP 4682290 putP Campylobacter jejuni subsp. jejuni 81-176 sodium/proline permease YP_001001149.1 1412156 R 354242 CDS YP_001001150.1 121612333 4683216 complement(1413643..1417131) 1 NC_008787.1 identified by match to protein family HMM PF00171; match to protein family HMM PF01619; bifunctional putA protein, putative 1417131 4683216 CJJ81176_1495 Campylobacter jejuni subsp. jejuni 81-176 bifunctional putA protein, putative YP_001001150.1 1413643 R 354242 CDS YP_001001151.1 121612650 4682365 complement(1417262..1418188) 1 NC_008787.1 identified by match to protein family HMM PF02769; match to protein family HMM TIGR00476; selenide, water dikinase 1418188 selD 4682365 selD Campylobacter jejuni subsp. jejuni 81-176 selenide, water dikinase YP_001001151.1 1417262 R 354242 CDS YP_001001152.1 121612107 4683728 complement(1418294..1418866) 1 NC_008787.1 identified by match to protein family HMM PF01206; hypothetical protein 1418866 4683728 CJJ81176_1497 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001152.1 1418294 R 354242 CDS YP_001001153.1 121613017 4682385 complement(1418977..1421079) 1 NC_008787.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1421079 4682385 CJJ81176_1498 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_001001153.1 1418977 R 354242 CDS YP_001001154.1 121612427 4683269 complement(1421192..1421893) 1 NC_008787.1 molybdate transport repressor 1421893 4683269 CJJ81176_1499 Campylobacter jejuni subsp. jejuni 81-176 molybdate transport repressor YP_001001154.1 1421192 R 354242 CDS YP_001001155.1 121613024 4682203 complement(1421922..1422704) 1 NC_008787.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 1422704 fdhD 4682203 fdhD Campylobacter jejuni subsp. jejuni 81-176 formate dehydrogenase accessory protein YP_001001155.1 1421922 R 354242 CDS YP_001001156.1 121612220 4683254 complement(1422871..1423803) 1 NC_008787.1 identified by match to protein family HMM TIGR01583; formate dehydrogenase, cytochrome b subunit 1423803 fdhC 4683254 fdhC Campylobacter jejuni subsp. jejuni 81-176 formate dehydrogenase, cytochrome b subunit YP_001001156.1 1422871 R 354242 CDS YP_001001157.1 121613584 4682598 complement(1423800..1424441) 1 NC_008787.1 identified by match to protein family HMM PF00037; formate dehydrogenase, iron-sulfur subunit 1424441 fdhB 4682598 fdhB Campylobacter jejuni subsp. jejuni 81-176 formate dehydrogenase, iron-sulfur subunit YP_001001157.1 1423800 R 354242 CDS YP_001001158.1 121612865 4683103 complement(1424438..1426678) 1 NC_008787.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; formate dehydrogenase, alpha subunit, selenocysteine-containing 1426678 fdhA 4683103 fdhA Campylobacter jejuni subsp. jejuni 81-176 formate dehydrogenase, alpha subunit, selenocysteine-containing YP_001001158.1 1424438 R 354242 CDS YP_001001159.1 121613367 4683463 complement(1426700..1427242) 1 NC_008787.1 identified by match to protein family HMM PF04879; match to protein family HMM TIGR01409; formate dehydrogenase 1427242 4683463 CJJ81176_1504 Campylobacter jejuni subsp. jejuni 81-176 formate dehydrogenase YP_001001159.1 1426700 R 354242 CDS YP_001001160.1 121612401 4682863 complement(1427242..1427433) 1 NC_008787.1 identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein 1427433 4682863 CJJ81176_1505 Campylobacter jejuni subsp. jejuni 81-176 Tat pathway signal sequence domain-containing protein YP_001001160.1 1427242 R 354242 CDS YP_001001161.1 121613482 4682245 complement(1427408..1428109) 1 NC_008787.1 hypothetical protein 1428109 4682245 CJJ81176_1506 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001161.1 1427408 R 354242 CDS YP_001001162.1 121612689 4683484 complement(1428425..1429573) 1 NC_008787.1 identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047; carboxynorspermidine decarboxylase 1429573 nspC 4683484 nspC Campylobacter jejuni subsp. jejuni 81-176 carboxynorspermidine decarboxylase YP_001001162.1 1428425 R 354242 CDS YP_001001163.1 121613217 4683673 1429697..1431238 1 NC_008787.1 identified by match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409; oxidoreductase, putative 1431238 4683673 CJJ81176_1508 Campylobacter jejuni subsp. jejuni 81-176 oxidoreductase, putative YP_001001163.1 1429697 D 354242 CDS YP_001001164.1 121612418 4683023 1431240..1431461 1 NC_008787.1 identified by match to protein family HMM PF02597; thiS family protein 1431461 4683023 CJJ81176_1509 Campylobacter jejuni subsp. jejuni 81-176 thiS family protein YP_001001164.1 1431240 D 354242 CDS YP_001001165.1 121613551 4682222 1431462..1431908 1 NC_008787.1 identified by match to protein family HMM PF02391; molybdopterin converting factor, subunit 2 1431908 4682222 CJJ81176_1510 Campylobacter jejuni subsp. jejuni 81-176 molybdopterin converting factor, subunit 2 YP_001001165.1 1431462 D 354242 CDS YP_001001166.1 121612119 4682520 1431912..1433102 1 NC_008787.1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis MoeA protein, putative 1433102 4682520 CJJ81176_1511 Campylobacter jejuni subsp. jejuni 81-176 molybdopterin biosynthesis MoeA protein, putative YP_001001166.1 1431912 D 354242 CDS YP_001001167.1 121613283 4682427 complement(1433615..1434463) 1 NC_008787.1 hypothetical protein 1434463 4682427 CJJ81176_1512 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001167.1 1433615 R 354242 CDS YP_001001168.1 121613562 4682945 complement(1434456..1435790) 1 NC_008787.1 hypothetical protein 1435790 4682945 CJJ81176_1513 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001168.1 1434456 R 354242 CDS YP_001001169.1 121613071 4682526 complement(1436239..1437228) 1 NC_008787.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1437228 purM 4682526 purM Campylobacter jejuni subsp. jejuni 81-176 phosphoribosylaminoimidazole synthetase YP_001001169.1 1436239 R 354242 CDS YP_001001170.1 121613316 4683630 1437289..1437894 1 NC_008787.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1437894 coaE 4683630 coaE Campylobacter jejuni subsp. jejuni 81-176 dephospho-CoA kinase YP_001001170.1 1437289 D 354242 CDS YP_001001171.1 121612449 4682924 1437891..1438640 1 NC_008787.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1438640 dapF 4682924 dapF Campylobacter jejuni subsp. jejuni 81-176 diaminopimelate epimerase YP_001001171.1 1437891 D 354242 CDS YP_001001172.1 121612382 4682163 1438615..1439346 1 NC_008787.1 identified by match to protein family HMM PF01832; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein 1439346 4682163 CJJ81176_1517 Campylobacter jejuni subsp. jejuni 81-176 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein YP_001001172.1 1438615 D 354242 CDS YP_001001173.1 121612970 4682271 complement(1439343..1440380) 1 NC_008787.1 hypothetical protein 1440380 4682271 CJJ81176_1518 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001173.1 1439343 R 354242 CDS YP_001001174.1 121613494 4683328 complement(1440445..1440894) 1 NC_008787.1 identified by match to protein family HMM PF00210; bacterioferritin, putative 1440894 4683328 CJJ81176_1519 Campylobacter jejuni subsp. jejuni 81-176 bacterioferritin, putative YP_001001174.1 1440445 R 354242 CDS YP_001001175.1 121612886 4682709 complement(1441024..1442244) 1 NC_008787.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase 1442244 pgi 4682709 pgi Campylobacter jejuni subsp. jejuni 81-176 glucose-6-phosphate isomerase YP_001001175.1 1441024 R 354242 CDS YP_001001176.1 121613414 4683430 complement(1442238..1443062) 1 NC_008787.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase 1443062 galU 4683430 galU Campylobacter jejuni subsp. jejuni 81-176 UTP-glucose-1-phosphate uridylyltransferase YP_001001176.1 1442238 R 354242 CDS YP_001001177.1 121613338 4682781 complement(1443144..1445117) 1 NC_008787.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1445117 acs 4682781 acs Campylobacter jejuni subsp. jejuni 81-176 acetyl-CoA synthetase YP_001001177.1 1443144 R 354242 CDS YP_001001178.1 121612410 4682890 complement(1445255..1446250) 1 NC_008787.1 identified by match to protein family HMM PF00005; tungsten ABC transporter, ATP-binding protein, putative 1446250 4682890 CJJ81176_1523 Campylobacter jejuni subsp. jejuni 81-176 tungsten ABC transporter, ATP-binding protein, putative YP_001001178.1 1445255 R 354242 CDS YP_001001179.1 121613333 4682237 complement(1446252..1446938) 1 NC_008787.1 identified by match to protein family HMM PF00528; tungstate ABC transporter, permease protein, putative 1446938 4682237 CJJ81176_1524 Campylobacter jejuni subsp. jejuni 81-176 tungstate ABC transporter, permease protein, putative YP_001001179.1 1446252 R 354242 CDS YP_001001180.1 121612305 4682905 1447017..1447826 1 NC_008787.1 tungstate ABC transporter, periplasmic tungstate-binding protein, putative 1447826 4682905 CJJ81176_1525 Campylobacter jejuni subsp. jejuni 81-176 tungstate ABC transporter, periplasmic tungstate-binding protein, putative YP_001001180.1 1447017 D 354242 CDS YP_001001181.1 121613379 4682412 1447968..1448735 1 NC_008787.1 identified by match to protein family HMM PF03746; LamB/YcsF family protein 1448735 4682412 CJJ81176_1526 Campylobacter jejuni subsp. jejuni 81-176 LamB/YcsF family protein YP_001001181.1 1447968 D 354242 CDS YP_001001182.1 121612842 4682841 1448745..1449485 1 NC_008787.1 identified by match to protein family HMM PF02682; match to protein family HMM TIGR00370; hypothetical protein 1449485 4682841 CJJ81176_1527 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001182.1 1448745 D 354242 CDS YP_001001183.1 121613308 4683492 1449466..1450431 1 NC_008787.1 identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724; hypothetical protein 1450431 4683492 CJJ81176_1528 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001183.1 1449466 D 354242 CDS YP_001001184.1 121613554 4682922 complement(1450428..1451324) 1 NC_008787.1 identified by match to protein family HMM PF00892; integral membrane protein 1451324 4682922 CJJ81176_1529 Campylobacter jejuni subsp. jejuni 81-176 integral membrane protein YP_001001184.1 1450428 R 354242 CDS YP_001001185.1 121612448 4682517 complement(1451357..1451935) 1 NC_008787.1 identified by match to protein family HMM PF02525; flavodoxin-like fold domain-containing protein 1451935 4682517 CJJ81176_1530 Campylobacter jejuni subsp. jejuni 81-176 flavodoxin-like fold domain-containing protein YP_001001185.1 1451357 R 354242 CDS YP_001001186.1 121613166 4682162 1452035..1452382 1 NC_008787.1 identified by match to protein family HMM PF01638; transcriptional regulator, putative 1452382 4682162 CJJ81176_1531 Campylobacter jejuni subsp. jejuni 81-176 transcriptional regulator, putative YP_001001186.1 1452035 D 354242 CDS YP_001001187.1 121612649 4683091 1452370..1452819 1 NC_008787.1 identified by match to protein family HMM PF08212; putative homolog of BLC protein 1452819 4683091 CJJ81176_1532 Campylobacter jejuni subsp. jejuni 81-176 putative homolog of BLC protein YP_001001187.1 1452370 D 354242 CDS YP_001001188.1 121613553 4683723 complement(1452821..1453897) 1 NC_008787.1 identified by match to protein family HMM PF00107; zinc-binding dehydrogenase family oxidoreductase 1453897 4683723 CJJ81176_1533 Campylobacter jejuni subsp. jejuni 81-176 zinc-binding dehydrogenase family oxidoreductase YP_001001188.1 1452821 R 354242 CDS YP_001001189.1 121612641 4682132 complement(1454125..1457220) 1 NC_008787.1 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I restriction-modification enzyme, R subunit 1457220 4682132 CJJ81176_1534 Campylobacter jejuni subsp. jejuni 81-176 type I restriction-modification enzyme, R subunit YP_001001189.1 1454125 R 354242 CDS YP_001001190.1 121613027 4683727 complement(1457223..1458989) 1 NC_008787.1 RloH 1458989 4683727 CJJ81176_1535 Campylobacter jejuni subsp. jejuni 81-176 RloH YP_001001190.1 1457223 R 354242 CDS YP_001001191.1 121612440 4683259 complement(1459000..1460142) 1 NC_008787.1 identified by match to protein family HMM PF01420; hypothetical protein 1460142 4683259 CJJ81176_1536 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001191.1 1459000 R 354242 CDS YP_001001192.1 121613143 4682177 1460154..1460315 1 NC_008787.1 hypothetical protein 1460315 4682177 CJJ81176_1537 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001192.1 1460154 D 354242 CDS YP_001001193.1 121613486 4683118 complement(1460361..1461812) 1 NC_008787.1 identified by match to protein family HMM PF04326; MloB 1461812 4683118 CJJ81176_1538 Campylobacter jejuni subsp. jejuni 81-176 MloB YP_001001193.1 1460361 R 354242 CDS YP_001001194.1 121612527 4682707 complement(1461824..1463326) 1 NC_008787.1 identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit 1463326 4682707 CJJ81176_1539 Campylobacter jejuni subsp. jejuni 81-176 type I restriction-modification system, M subunit YP_001001194.1 1461824 R 354242 CDS YP_001001195.1 121613693 4683257 1463390..1463503 1 NC_008787.1 hypothetical protein 1463503 4683257 CJJ81176_1540 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001195.1 1463390 D 354242 CDS YP_001001196.1 121612766 4682332 complement(1463696..1464331) 1 NC_008787.1 hypothetical protein 1464331 4682332 CJJ81176_1541 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001196.1 1463696 R 354242 CDS YP_001001197.1 121612960 4683588 1464524..1464856 1 NC_008787.1 identified by match to protein family HMM PF01638; transcriptional regulator 1464856 4683588 CJJ81176_1542 Campylobacter jejuni subsp. jejuni 81-176 transcriptional regulator YP_001001197.1 1464524 D 354242 CDS YP_001001198.1 121612375 4683330 1464941..1465063 1 NC_008787.1 permease, putative 1465063 4683330 CJJ81176_1543 Campylobacter jejuni subsp. jejuni 81-176 permease, putative YP_001001198.1 1464941 D 354242 CDS YP_001001199.1 121613295 4682284 1465247..1465888 1 NC_008787.1 identified by match to protein family HMM PF03773; hypothetical protein 1465888 4682284 CJJ81176_1544 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001199.1 1465247 D 354242 CDS YP_001001200.1 121613407 4682939 1465898..1466077 1 NC_008787.1 identified by match to protein family HMM PF01022; arsenical resistance operon repressor 1466077 arsR 4682939 arsR Campylobacter jejuni subsp. jejuni 81-176 arsenical resistance operon repressor YP_001001200.1 1465898 D 354242 CDS YP_001001201.1 121612639 4683094 1466068..1466220 1 NC_008787.1 arsenical resistance operon repressor 1466220 4683094 CJJ81176_1546 Campylobacter jejuni subsp. jejuni 81-176 arsenical resistance operon repressor YP_001001201.1 1466068 D 354242 CDS YP_001001202.1 121613246 4683733 complement(1466228..1466659) 1 NC_008787.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1466659 4683733 CJJ81176_1547 Campylobacter jejuni subsp. jejuni 81-176 MerR family transcriptional regulator YP_001001202.1 1466228 R 354242 CDS YP_001001203.1 121612444 4682996 1466772..1467653 1 NC_008787.1 identified by match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1467653 4682996 CJJ81176_1548 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_001001203.1 1466772 D 354242 CDS YP_001001204.1 121612938 4682173 1468028..1468738 1 NC_008787.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1468738 4682173 CJJ81176_1549 Campylobacter jejuni subsp. jejuni 81-176 methyl-accepting chemotaxis protein YP_001001204.1 1468028 D 354242 CDS YP_001001205.1 121612223 4683382 complement(1468781..1471147) 1 NC_008787.1 paralyzed flagella protein PflA 1471147 pflA 4683382 pflA Campylobacter jejuni subsp. jejuni 81-176 paralyzed flagella protein PflA YP_001001205.1 1468781 R 354242 CDS YP_001001206.1 121613344 4682578 complement(1471169..1472557) 1 NC_008787.1 identified by match to protein family HMM PF00361; NADH-quinone oxidoreductase, N subunit 1472557 nuoN 4682578 nuoN Campylobacter jejuni subsp. jejuni 81-176 NADH-quinone oxidoreductase, N subunit YP_001001206.1 1471169 R 354242 CDS YP_001001207.1 121612466 4682882 complement(1472547..1474034) 1 NC_008787.1 identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972; NADH-quinone oxidoreductase, M subunit 1474034 nuoM 4682882 nuoM Campylobacter jejuni subsp. jejuni 81-176 NADH-quinone oxidoreductase, M subunit YP_001001207.1 1472547 R 354242 CDS YP_001001208.1 121612984 4682136 complement(1474036..1475826) 1 NC_008787.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1475826 nuoL 4682136 nuoL Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit L YP_001001208.1 1474036 R 354242 CDS YP_001001209.1 121612273 4683310 complement(1475828..1476124) 1 NC_008787.1 identified by match to protein family HMM PF00420; NADH-quinone oxidoreductase, K subunit 1476124 nuoK 4683310 nuoK Campylobacter jejuni subsp. jejuni 81-176 NADH-quinone oxidoreductase, K subunit YP_001001209.1 1475828 R 354242 CDS YP_001001210.1 121613130 4682468 complement(1476121..1476639) 1 NC_008787.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1476639 nuoJ 4682468 nuoJ Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit J YP_001001210.1 1476121 R 354242 CDS YP_001001211.1 121612213 4683137 complement(1476636..1477277) 1 NC_008787.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1477277 nuoI 4683137 nuoI Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit I YP_001001211.1 1476636 R 354242 CDS YP_001001212.1 121613672 4682621 complement(1477287..1478285) 1 NC_008787.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1478285 nuoH 4682621 nuoH Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit H YP_001001212.1 1477287 R 354242 CDS YP_001001213.1 121612814 4682966 complement(1478278..1480740) 1 NC_008787.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1480740 nuoG 4682966 nuoG Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit G YP_001001213.1 1478278 R 354242 CDS YP_001001214.1 121612301 4683525 complement(1480737..1481429) 1 NC_008787.1 hypothetical protein 1481429 4683525 CJJ81176_1559 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001214.1 1480737 R 354242 CDS YP_001001215.1 121613294 4682431 complement(1481426..1481566) 1 NC_008787.1 hypothetical protein 1481566 4682431 CJJ81176_1560 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001215.1 1481426 R 354242 CDS YP_001001216.1 121612143 4682938 complement(1481650..1482876) 1 NC_008787.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1482876 nuoD 4682938 nuoD Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit D YP_001001216.1 1481650 R 354242 CDS YP_001001217.1 121613082 4682548 complement(1482878..1483669) 1 NC_008787.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit C 1483669 nuoC 4682548 nuoC Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit C YP_001001217.1 1482878 R 354242 CDS YP_001001218.1 121613264 4683194 complement(1483669..1484172) 1 NC_008787.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1484172 nuoB 4683194 nuoB Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit B YP_001001218.1 1483669 R 354242 CDS YP_001001219.1 121612125 4682982 complement(1484154..1484543) 1 NC_008787.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit A 1484543 nuoA 4682982 nuoA Campylobacter jejuni subsp. jejuni 81-176 NADH dehydrogenase subunit A YP_001001219.1 1484154 R 354242 CDS YP_001001220.1 121612479 4682464 complement(1484756..1485421) 1 NC_008787.1 identified by match to protein family HMM PF00005; peptide ABC transporter, ATP-binding protein 1485421 4682464 CJJ81176_1565 Campylobacter jejuni subsp. jejuni 81-176 peptide ABC transporter, ATP-binding protein YP_001001220.1 1484756 R 354242 CDS YP_001001221.1 121613337 4683775 complement(1485414..1486124) 1 NC_008787.1 identified by match to protein family HMM PF00005; peptide ABC transporter, ATP-binding protein 1486124 4683775 CJJ81176_1566 Campylobacter jejuni subsp. jejuni 81-176 peptide ABC transporter, ATP-binding protein YP_001001221.1 1485414 R 354242 CDS YP_001001222.1 121612240 4682893 complement(1486121..1486909) 1 NC_008787.1 identified by match to protein family HMM PF00528; peptide ABC transporter, permease protein 1486909 4682893 CJJ81176_1567 Campylobacter jejuni subsp. jejuni 81-176 peptide ABC transporter, permease protein YP_001001222.1 1486121 R 354242 CDS YP_001001223.1 121613720 4682777 complement(1486902..1487846) 1 NC_008787.1 identified by match to protein family HMM PF00528; peptide ABC transporter, permease protein 1487846 4682777 CJJ81176_1568 Campylobacter jejuni subsp. jejuni 81-176 peptide ABC transporter, permease protein YP_001001223.1 1486902 R 354242 CDS YP_001001224.1 121612471 4682302 complement(1487846..1489381) 1 NC_008787.1 identified by match to protein family HMM PF00496; peptide ABC transporter, periplasmic peptide-binding protein 1489381 4682302 CJJ81176_1569 Campylobacter jejuni subsp. jejuni 81-176 peptide ABC transporter, periplasmic peptide-binding protein YP_001001224.1 1487846 R 354242 CDS YP_001001225.1 121613348 4682122 1489716..1492040 1 NC_008787.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR02166; anaerobic dimethyl sulfoxide reductase chain A 1492040 4682122 CJJ81176_1570 Campylobacter jejuni subsp. jejuni 81-176 anaerobic dimethyl sulfoxide reductase chain A YP_001001225.1 1489716 D 354242 CDS YP_001001226.1 121613356 4682878 1492051..1492707 1 NC_008787.1 identified by match to protein family HMM PF00037; match to protein family HMM TIGR02951; dimethylsulfoxide reductase, chain B 1492707 dmsB 4682878 dmsB Campylobacter jejuni subsp. jejuni 81-176 dimethylsulfoxide reductase, chain B YP_001001226.1 1492051 D 354242 CDS YP_001001227.1 121613418 4682874 1492694..1493560 1 NC_008787.1 hypothetical protein 1493560 4682874 CJJ81176_1572 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001227.1 1492694 D 354242 CDS YP_001001228.1 121612698 4682767 1493560..1494117 1 NC_008787.1 hypothetical protein 1494117 4682767 CJJ81176_1573 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001228.1 1493560 D 354242 CDS YP_001001229.1 121613692 4683670 1494184..1494606 1 NC_008787.1 identified by match to protein family HMM PF00042; flavohemoprotein, truncation 1494606 4683670 CJJ81176_1574 Campylobacter jejuni subsp. jejuni 81-176 flavohemoprotein, truncation YP_001001229.1 1494184 D 354242 CDS YP_001001230.1 121613099 4682331 complement(1494626..1496257) 1 NC_008787.1 efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane component/ATP-binding component 1496257 4682331 CJJ81176_1575 Campylobacter jejuni subsp. jejuni 81-176 multidrug transporter membrane component/ATP-binding component YP_001001230.1 1494626 R 354242 CDS YP_001001231.1 121613612 4683172 complement(1496307..1497602) 1 NC_008787.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; proline/betaine transporter, putative, authentic frameshift 1497602 4683172 CJJ81176_1576 Campylobacter jejuni subsp. jejuni 81-176 proline/betaine transporter, putative, authentic frameshift YP_001001231.1 1496307 R 354242 CDS YP_001001232.1 121612855 4683781 1497690..1498487 1 NC_008787.1 identified by match to protein family HMM PF00753; hypothetical protein 1498487 4683781 CJJ81176_1577 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001232.1 1497690 D 354242 CDS YP_001001233.1 121613429 4683475 1498575..1498793 1 NC_008787.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1498793 infA 4683475 infA Campylobacter jejuni subsp. jejuni 81-176 translation initiation factor IF-1 YP_001001233.1 1498575 D 354242 CDS YP_001001234.1 121612597 4682774 1498965..1499078 1 NC_008787.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 1499078 rpmJ 4682774 rpmJ Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L36 YP_001001234.1 1498965 D 354242 CDS YP_001001235.1 121613746 4682446 1499081..1499446 1 NC_008787.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1499446 rpsM 4682446 rpsM Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S13 YP_001001235.1 1499081 D 354242 CDS YP_001001236.1 121612731 4682771 1499456..1499848 1 NC_008787.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1499848 rpsK 4682771 rpsK Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S11 YP_001001236.1 1499456 D 354242 CDS YP_001001237.1 121612243 4683623 1499876..1500502 1 NC_008787.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1500502 rpsD 4683623 rpsD Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S4 YP_001001237.1 1499876 D 354242 CDS YP_001001238.1 121612721 4682542 1500515..1501528 1 NC_008787.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1501528 rpoA 4682542 rpoA Campylobacter jejuni subsp. jejuni 81-176 DNA-directed RNA polymerase subunit alpha YP_001001238.1 1500515 D 354242 CDS YP_001001239.1 121613440 4683640 1501532..1501885 1 NC_008787.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1501885 rplQ 4683640 rplQ Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L17 YP_001001239.1 1501532 D 354242 CDS YP_001001240.1 121612715 4682744 1502058..1502957 1 NC_008787.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 1502957 hisG 4682744 hisG Campylobacter jejuni subsp. jejuni 81-176 ATP phosphoribosyltransferase YP_001001240.1 1502058 D 354242 CDS YP_001001241.1 121613366 4683658 1502965..1504251 1 NC_008787.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1504251 hisD 4683658 hisD Campylobacter jejuni subsp. jejuni 81-176 histidinol dehydrogenase YP_001001241.1 1502965 D 354242 CDS YP_001001242.1 121613404 4682862 1504248..1505306 1 NC_008787.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1505306 hisB 4682862 hisB Campylobacter jejuni subsp. jejuni 81-176 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_001001242.1 1504248 D 354242 CDS YP_001001243.1 121612590 4682813 1505303..1505890 1 NC_008787.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1505890 hisH 4682813 hisH Campylobacter jejuni subsp. jejuni 81-176 imidazole glycerol phosphate synthase subunit HisH YP_001001243.1 1505303 D 354242 CDS YP_001001244.1 121613076 4682484 1505887..1506618 1 NC_008787.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1506618 hisA 4682484 hisA Campylobacter jejuni subsp. jejuni 81-176 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001001244.1 1505887 D 354242 CDS YP_001001245.1 121612370 4683206 1506603..1507505 1 NC_008787.1 identified by match to protein family HMM PF04373; HrgA protein 1507505 4683206 CJJ81176_1589 Campylobacter jejuni subsp. jejuni 81-176 HrgA protein YP_001001245.1 1506603 D 354242 CDS YP_001001246.1 121613611 4682287 1507506..1508273 1 NC_008787.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1508273 hisF-2 4682287 hisF-2 Campylobacter jejuni subsp. jejuni 81-176 imidazole glycerol phosphate synthase subunit HisF YP_001001246.1 1507506 D 354242 CDS YP_001001247.1 121612524 4682128 1508275..1508898 1 NC_008787.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1508898 hisI 4682128 hisI Campylobacter jejuni subsp. jejuni 81-176 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein YP_001001247.1 1508275 D 354242 CDS YP_001001248.1 121613727 4683306 complement(1508922..1510082) 1 NC_008787.1 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative 1510082 4683306 CJJ81176_1592 Campylobacter jejuni subsp. jejuni 81-176 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative YP_001001248.1 1508922 R 354242 CDS YP_001001249.1 121612767 4682929 complement(1510108..1511214) 1 NC_008787.1 identified by match to protein family HMM PF01883; ATP/GTP-binding protein 1511214 mrp 4682929 mrp Campylobacter jejuni subsp. jejuni 81-176 ATP/GTP-binding protein YP_001001249.1 1510108 R 354242 CDS YP_001001250.1 121612233 4683589 1511337..1512452 1 NC_008787.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein 1512452 ispDF 4683589 ispDF Campylobacter jejuni subsp. jejuni 81-176 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein YP_001001250.1 1511337 D 354242 CDS YP_001001251.1 121613170 4682559 1512449..1513336 1 NC_008787.1 identified by match to protein family HMM PF00072; DNA-binding response regulator, putative 1513336 4682559 CJJ81176_1595 Campylobacter jejuni subsp. jejuni 81-176 DNA-binding response regulator, putative YP_001001251.1 1512449 D 354242 CDS YP_001001252.1 121612386 4683079 1513314..1514474 1 NC_008787.1 ATP-sulfurylase family protein 1514474 4683079 CJJ81176_1596 Campylobacter jejuni subsp. jejuni 81-176 ATP-sulfurylase family protein YP_001001252.1 1513314 D 354242 CDS YP_001001253.1 121613104 4682269 1514479..1514979 1 NC_008787.1 identified by match to protein family HMM PF04608; phosphatidylglycerophosphatase A 1514979 pgpA 4682269 pgpA Campylobacter jejuni subsp. jejuni 81-176 phosphatidylglycerophosphatase A YP_001001253.1 1514479 D 354242 CDS YP_001001254.1 121612762 4683165 1515058..1515321 1 NC_008787.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1515321 rpsT 4683165 rpsT Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S20 YP_001001254.1 1515058 D 354242 CDS YP_001001255.1 121613478 4683582 1515340..1516407 1 NC_008787.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1516407 prfA 4683582 prfA Campylobacter jejuni subsp. jejuni 81-176 peptide chain release factor 1 YP_001001255.1 1515340 D 354242 CDS YP_001001256.1 121612296 4682720 complement(1516421..1517176) 1 NC_008787.1 identified by match to protein family HMM PF01243; hypothetical protein 1517176 4682720 CJJ81176_1600 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001256.1 1516421 R 354242 CDS YP_001001257.1 121613006 4682551 1517370..1519478 1 NC_008787.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent heme receptor 1519478 chuA 4682551 chuA Campylobacter jejuni subsp. jejuni 81-176 TonB-dependent heme receptor YP_001001257.1 1517370 D 354242 CDS YP_001001258.1 121612507 4683286 1519453..1520439 1 NC_008787.1 identified by match to protein family HMM PF01032; hemin ABC transporter, permease protein, putative 1520439 4683286 CJJ81176_1602 Campylobacter jejuni subsp. jejuni 81-176 hemin ABC transporter, permease protein, putative YP_001001258.1 1519453 D 354242 CDS YP_001001259.1 121613145 4683553 1520439..1521215 1 NC_008787.1 identified by match to protein family HMM PF00005; hemin ABC transporter, ATP-binding protein, putative 1521215 4683553 CJJ81176_1603 Campylobacter jejuni subsp. jejuni 81-176 hemin ABC transporter, ATP-binding protein, putative YP_001001259.1 1520439 D 354242 CDS YP_001001260.1 121612646 4683108 1521212..1522018 1 NC_008787.1 identified by match to protein family HMM PF01497; hemin ABC transporter, periplasmic hemin-binding protein, putative 1522018 4683108 CJJ81176_1604 Campylobacter jejuni subsp. jejuni 81-176 hemin ABC transporter, periplasmic hemin-binding protein, putative YP_001001260.1 1521212 D 354242 CDS YP_001001261.1 121613522 4683730 complement(1522015..1522932) 1 NC_008787.1 identified by match to protein family HMM PF04055; hypothetical protein 1522932 4683730 CJJ81176_1605 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001261.1 1522015 R 354242 CDS YP_001001262.1 121612309 4682092 1523038..1524297 1 NC_008787.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; alpha-ketoglutarate permease 1524297 kgtP 4682092 kgtP Campylobacter jejuni subsp. jejuni 81-176 alpha-ketoglutarate permease YP_001001262.1 1523038 D 354242 CDS YP_001001263.1 121613658 4682417 complement(1524283..1525302) 1 NC_008787.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 1525302 mutY 4682417 mutY Campylobacter jejuni subsp. jejuni 81-176 A/G-specific adenine glycosylase YP_001001263.1 1524283 R 354242 CDS YP_001001264.1 121612997 4682666 1525375..1526127 1 NC_008787.1 hypothetical protein 1526127 4682666 CJJ81176_1608 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001264.1 1525375 D 354242 CDS YP_001001265.1 121612362 4682258 1526775..1527785 1 NC_008787.1 identified by match to protein family HMM PF00383; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 1527785 ribD 4682258 ribD Campylobacter jejuni subsp. jejuni 81-176 riboflavin biosynthesis protein RibD YP_001001265.1 1526775 D 354242 CDS YP_001001266.1 121612671 4682296 1527775..1528287 1 NC_008787.1 hypothetical protein 1528287 4682296 CJJ81176_1614 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001266.1 1527775 D 354242 CDS YP_001001267.1 121613416 4683707 complement(1528295..1529659) 1 NC_008787.1 identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine ammonia-lyase 1529659 sdaA 4683707 sdaA Campylobacter jejuni subsp. jejuni 81-176 L-serine ammonia-lyase YP_001001267.1 1528295 R 354242 CDS YP_001001268.1 121612885 4682779 complement(1529674..1530924) 1 NC_008787.1 identified by match to protein family HMM PF03222; match to protein family HMM PF03845; serine transporter 1530924 sdaC 4682779 sdaC Campylobacter jejuni subsp. jejuni 81-176 serine transporter YP_001001268.1 1529674 R 354242 CDS YP_001001269.1 121613556 4683443 complement(1531185..1531601) 1 NC_008787.1 hypothetical protein 1531601 4683443 CJJ81176_1617 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001269.1 1531185 R 354242 CDS YP_001001270.1 121612295 4682084 complement(1531666..1532409) 1 NC_008787.1 hypothetical protein 1532409 4682084 CJJ81176_1618 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001270.1 1531666 R 354242 CDS YP_001001271.1 121613271 4682433 1532555..1532992 1 NC_008787.1 identified by match to protein family HMM PF01618; match to protein family HMM TIGR02805; TonB system transport protein ExbB 1532992 exbB-2 4682433 exbB-2 Campylobacter jejuni subsp. jejuni 81-176 TonB system transport protein ExbB YP_001001271.1 1532555 D 354242 CDS YP_001001272.1 121613363 4682969 1532964..1533374 1 NC_008787.1 identified by match to protein family HMM PF02472; match to protein family HMM TIGR02804; biopolymer transport exbD protein 1533374 exbD 4682969 exbD Campylobacter jejuni subsp. jejuni 81-176 biopolymer transport exbD protein YP_001001272.1 1532964 D 354242 CDS YP_001001273.1 121612629 4682865 1533371..1534054 1 NC_008787.1 identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB-dependent receptor, putative, authentic frameshift 1534054 4682865 CJJ81176_1621 Campylobacter jejuni subsp. jejuni 81-176 TonB-dependent receptor, putative, authentic frameshift YP_001001273.1 1533371 D 354242 CDS YP_001001274.1 121613634 4682087 complement(1534074..1534943) 1 NC_008787.1 hypothetical protein 1534943 4682087 CJJ81176_1622 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001274.1 1534074 R 354242 CDS YP_001001275.1 121612925 4682677 complement(1534947..1535108) 1 NC_008787.1 putative periplasmic protein 1535108 4682677 CJJ81176_1623 Campylobacter jejuni subsp. jejuni 81-176 putative periplasmic protein YP_001001275.1 1534947 R 354242 CDS YP_001001276.1 121613255 4683403 1535203..1536186 1 NC_008787.1 hypothetical protein 1536186 4683403 CJJ81176_1624 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001276.1 1535203 D 354242 CDS YP_001001277.1 121612121 4682989 complement(1536273..1537361) 1 NC_008787.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1537361 aroC 4682989 aroC Campylobacter jejuni subsp. jejuni 81-176 chorismate synthase YP_001001277.1 1536273 R 354242 CDS YP_001001278.1 121613213 4682450 complement(1537361..1538038) 1 NC_008787.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1538038 rnc 4682450 rnc Campylobacter jejuni subsp. jejuni 81-176 ribonuclease III YP_001001278.1 1537361 R 354242 CDS YP_001001279.1 121612242 4683041 complement(1538022..1538462) 1 NC_008787.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 1538462 rnhA 4683041 rnhA Campylobacter jejuni subsp. jejuni 81-176 ribonuclease H YP_001001279.1 1538022 R 354242 CDS YP_001001280.1 121613390 4682541 complement(1538449..1539435) 1 NC_008787.1 identified by match to protein family HMM PF07719; hypothetical protein 1539435 4682541 CJJ81176_1628 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001280.1 1538449 R 354242 CDS YP_001001281.1 121612785 4682822 1539478..1541322 1 NC_008787.1 synthesizes RNA primers at the replication forks; DNA primase 1541322 dnaG 4682822 dnaG Campylobacter jejuni subsp. jejuni 81-176 DNA primase YP_001001281.1 1539478 D 354242 CDS YP_001001282.1 121612278 4683559 1541404..1541676 1 NC_008787.1 identified by match to protein family HMM PF01106; NifU family protein 1541676 4683559 CJJ81176_1630 Campylobacter jejuni subsp. jejuni 81-176 NifU family protein YP_001001282.1 1541404 D 354242 CDS YP_001001283.1 121612977 4682459 1541663..1542214 1 NC_008787.1 hypothetical protein 1542214 4682459 CJJ81176_1631 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001283.1 1541663 D 354242 CDS YP_001001284.1 121612468 4683319 1542198..1543481 1 NC_008787.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1543481 murE 4683319 murE Campylobacter jejuni subsp. jejuni 81-176 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001001284.1 1542198 D 354242 CDS YP_001001285.1 121613159 4682134 1543485..1543796 1 NC_008787.1 identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 1543796 4682134 CJJ81176_1633 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001285.1 1543485 D 354242 CDS YP_001001286.1 121612648 4683359 1543817..1544887 1 NC_008787.1 PDZ domain-containing protein 1544887 4683359 CJJ81176_1634 Campylobacter jejuni subsp. jejuni 81-176 PDZ domain-containing protein YP_001001286.1 1543817 D 354242 CDS YP_001001287.1 121613596 4683722 1544884..1545729 1 NC_008787.1 identified by match to protein family HMM PF00348; geranyltranstransferase 1545729 ispA 4683722 ispA Campylobacter jejuni subsp. jejuni 81-176 geranyltranstransferase YP_001001287.1 1544884 D 354242 CDS YP_001001288.1 121613007 4683368 1545739..1547637 1 NC_008787.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1547637 tkt 4683368 tkt Campylobacter jejuni subsp. jejuni 81-176 transketolase YP_001001288.1 1545739 D 354242 CDS YP_001001289.1 121613751 4683287 1547639..1548748 1 NC_008787.1 identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056; ABC transporter, permease protein, putative 1548748 4683287 CJJ81176_1637 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, permease protein, putative YP_001001289.1 1547639 D 354242 CDS YP_001001290.1 121613749 4682183 1548749..1549471 1 NC_008787.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1549471 4682183 CJJ81176_1638 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein YP_001001290.1 1548749 D 354242 CDS YP_001001291.1 121612777 4682193 1549474..1550364 1 NC_008787.1 identified by match to protein family HMM PF02470; ABC transporter, periplasmic substrate-binding protein, putative 1550364 4682193 CJJ81176_1639 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, periplasmic substrate-binding protein, putative YP_001001291.1 1549474 D 354242 CDS YP_001001292.1 121613719 4683571 1550364..1550963 1 NC_008787.1 putative lipoprotein 1550963 4683571 CJJ81176_1640 Campylobacter jejuni subsp. jejuni 81-176 putative lipoprotein YP_001001292.1 1550364 D 354242 CDS YP_001001293.1 121612752 4682546 1551019..1551519 1 NC_008787.1 hypothetical protein 1551519 4682546 CJJ81176_1641 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001293.1 1551019 D 354242 CDS YP_001001294.1 121612289 4683596 complement(1551891..1552649) 1 NC_008787.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1552649 map 4683596 map Campylobacter jejuni subsp. jejuni 81-176 methionine aminopeptidase YP_001001294.1 1551891 R 354242 CDS YP_001001295.1 121612969 4682439 complement(1552659..1553402) 1 NC_008787.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1553402 murI 4682439 murI Campylobacter jejuni subsp. jejuni 81-176 glutamate racemase YP_001001295.1 1552659 R 354242 CDS YP_001001296.1 121612509 4683321 complement(1553404..1553865) 1 NC_008787.1 identified by match to protein family HMM PF00877; lipoprotein NlpC 1553865 nlpC 4683321 nlpC Campylobacter jejuni subsp. jejuni 81-176 lipoprotein NlpC YP_001001296.1 1553404 R 354242 CDS YP_001001297.1 121613421 4683487 complement(1553874..1555043) 1 NC_008787.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1555043 nhaA 4683487 nhaA Campylobacter jejuni subsp. jejuni 81-176 pH-dependent sodium/proton antiporter YP_001001297.1 1553874 R 354242 CDS YP_001001298.1 121612709 4682790 complement(1555040..1556188) 1 NC_008787.1 identified by match to protein family HMM PF06965; match to protein family HMM TIGR00773; Na+/H+ antiporter NhaA 1556188 nhaA-2 4682790 nhaA-2 Campylobacter jejuni subsp. jejuni 81-176 Na+/H+ antiporter NhaA YP_001001298.1 1555040 R 354242 CDS YP_001001299.1 121613615 4683654 complement(1556330..1556512) 1 NC_008787.1 hypothetical protein 1556512 4683654 CJJ81176_1647 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001299.1 1556330 R 354242 CDS YP_001001300.1 121613155 4683765 1556873..1557085 1 NC_008787.1 hypothetical protein 1557085 4683765 CJJ81176_1648 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001300.1 1556873 D 354242 CDS YP_001001301.1 121612201 4683110 1557435..1559525 1 NC_008787.1 identified by match to protein family HMM PF03239; FTR1 family iron permease 1559525 4683110 CJJ81176_1649 Campylobacter jejuni subsp. jejuni 81-176 FTR1 family iron permease YP_001001301.1 1557435 D 354242 CDS YP_001001302.1 121612626 4682626 1559522..1560061 1 NC_008787.1 hypothetical protein 1560061 4682626 CJJ81176_1650 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001302.1 1559522 D 354242 CDS YP_001001303.1 121613436 4682160 1560144..1561547 1 NC_008787.1 identified by match to protein family HMM PF04945; hypothetical protein 1561547 4682160 CJJ81176_1651 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001303.1 1560144 D 354242 CDS YP_001001304.1 121612862 4682756 1561537..1562826 1 NC_008787.1 identified by match to protein family HMM PF02687; ABC transporter, permease protein 1562826 4682756 CJJ81176_1652 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, permease protein YP_001001304.1 1561537 D 354242 CDS YP_001001305.1 121613580 4683468 1562816..1563934 1 NC_008787.1 identified by match to protein family HMM PF02687; ABC transporter, permease protein 1563934 4683468 CJJ81176_1653 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, permease protein YP_001001305.1 1562816 D 354242 CDS YP_001001306.1 121612230 4682791 1563934..1564584 1 NC_008787.1 identified by match to protein family HMM PF00005; ABC transporter, ATP-binding protein 1564584 4682791 CJJ81176_1654 Campylobacter jejuni subsp. jejuni 81-176 ABC transporter, ATP-binding protein YP_001001306.1 1563934 D 354242 CDS YP_001001307.1 121613144 4682568 1564581..1565069 1 NC_008787.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; thiredoxin,-like protein 1565069 4682568 CJJ81176_1655 Campylobacter jejuni subsp. jejuni 81-176 thiredoxin,-like protein YP_001001307.1 1564581 D 354242 CDS YP_001001308.1 121613699 4683107 1565264..1565533 1 NC_008787.1 identified by match to protein family HMM PF08534; thioredoxin family protein 1565533 4683107 CJJ81176_1656 Campylobacter jejuni subsp. jejuni 81-176 thioredoxin family protein YP_001001308.1 1565264 D 354242 CDS YP_001001309.1 121612948 4682414 complement(1565543..1565980) 1 NC_008787.1 identified by match to protein family HMM PF04214; hypothetical protein 1565980 4682414 CJJ81176_1657 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001309.1 1565543 R 354242 CDS YP_001001310.1 121613324 4683360 complement(1566071..1566214) 1 NC_008787.1 hypothetical protein 1566214 4683360 CJJ81176_1658 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001310.1 1566071 R 354242 CDS YP_001001311.1 121612341 4682908 complement(1566448..1566585) 1 NC_008787.1 hypothetical protein 1566585 4682908 CJJ81176_1659 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001311.1 1566448 R 354242 CDS YP_001001312.1 121612332 4682164 complement(1567354..1568202) 1 NC_008787.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 1568202 4682164 CJJ81176_1665 Campylobacter jejuni subsp. jejuni 81-176 DNA ligase YP_001001312.1 1567354 R 354242 CDS YP_001001313.1 121613030 4682364 complement(1568202..1568864) 1 NC_008787.1 hypothetical protein 1568864 4682364 CJJ81176_1666 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001313.1 1568202 R 354242 CDS YP_001001314.1 121613711 4683244 complement(1568854..1569057) 1 NC_008787.1 hypothetical protein 1569057 4683244 CJJ81176_1667 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001314.1 1568854 R 354242 CDS YP_001001315.1 121612983 4682309 complement(1569123..1570367) 1 NC_008787.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1570367 eno 4682309 eno Campylobacter jejuni subsp. jejuni 81-176 phosphopyruvate hydratase YP_001001315.1 1569123 R 354242 CDS YP_001001316.1 121612592 4683309 complement(1570367..1571398) 1 NC_008787.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1571398 recA 4683309 recA Campylobacter jejuni subsp. jejuni 81-176 recombinase A YP_001001316.1 1570367 R 354242 CDS YP_001001317.1 121613509 4682500 1571505..1572365 1 NC_008787.1 identified by match to protein family HMM PF02642; hypothetical protein 1572365 4682500 CJJ81176_1670 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001317.1 1571505 D 354242 CDS YP_001001318.1 121612222 4682694 1572377..1572646 1 NC_008787.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1572646 fliQ 4682694 fliQ Campylobacter jejuni subsp. jejuni 81-176 flagellar biosynthesis protein FliQ YP_001001318.1 1572377 D 354242 CDS YP_001001319.1 121613137 4682577 1572643..1573419 1 NC_008787.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1573419 murB 4682577 murB Campylobacter jejuni subsp. jejuni 81-176 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001001319.1 1572643 D 354242 CDS YP_001001320.1 121612757 4683116 complement(1573442..1574206) 1 NC_008787.1 hypothetical protein 1574206 4683116 CJJ81176_1673 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001320.1 1573442 R 354242 CDS YP_001001321.1 121613046 4683599 complement(1574252..1575016) 1 NC_008787.1 identified by match to protein family HMM PF00459; cysQ protein 1575016 cysQ 4683599 cysQ Campylobacter jejuni subsp. jejuni 81-176 cysQ protein YP_001001321.1 1574252 R 354242 CDS YP_001001322.1 121613079 4683222 complement(1575097..1576365) 1 NC_008787.1 identified by match to protein family HMM PF00285; match to protein family HMM TIGR01798; citrate synthase 1576365 gltA 4683222 gltA Campylobacter jejuni subsp. jejuni 81-176 citrate synthase YP_001001322.1 1575097 R 354242 CDS YP_001001323.1 121612160 4683197 complement(1576480..1577655) 1 NC_008787.1 identified by match to protein family HMM PF00999; sodium/hydrogen exchanger family protein 1577655 4683197 CJJ81176_1676 Campylobacter jejuni subsp. jejuni 81-176 sodium/hydrogen exchanger family protein YP_001001323.1 1576480 R 354242 CDS YP_001001324.1 121612907 4682612 complement(1577636..1578472) 1 NC_008787.1 catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 1578472 bioB 4682612 bioB Campylobacter jejuni subsp. jejuni 81-176 biotin synthase YP_001001324.1 1577636 R 354242 CDS YP_001001325.1 121613434 4683417 complement(1578474..1580576) 1 NC_008787.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1580576 topA 4683417 topA Campylobacter jejuni subsp. jejuni 81-176 DNA topoisomerase I YP_001001325.1 1578474 R 354242 CDS YP_001001326.1 121612491 4682754 1580771..1582042 1 NC_008787.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 1582042 4682754 CJJ81176_1679 Campylobacter jejuni subsp. jejuni 81-176 major facilitator superfamily protein YP_001001326.1 1580771 D 354242 CDS YP_001001327.1 121613245 4683735 complement(1582110..1584122) 1 NC_008787.1 identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; dipeptidyl-peptidase 1584122 4683735 CJJ81176_1680 Campylobacter jejuni subsp. jejuni 81-176 dipeptidyl-peptidase YP_001001327.1 1582110 R 354242 CDS YP_001001328.1 121612106 4683011 complement(1584119..1584430) 1 NC_008787.1 hypothetical protein 1584430 4683011 CJJ81176_1681 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001328.1 1584119 R 354242 CDS YP_001001329.1 121613683 4682381 complement(1584418..1584789) 1 NC_008787.1 hypothetical protein 1584789 4682381 CJJ81176_1682 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001329.1 1584418 R 354242 CDS YP_001001330.1 121613069 4682342 complement(1584804..1585052) 1 NC_008787.1 hypothetical protein 1585052 4682342 CJJ81176_1683 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001330.1 1584804 R 354242 CDS YP_001001331.1 121612164 4683217 complement(1585049..1585321) 1 NC_008787.1 hypothetical protein 1585321 4683217 CJJ81176_1684 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001331.1 1585049 R 354242 CDS YP_001001332.1 121612558 4682639 complement(1585547..1586812) 1 NC_008787.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1586812 secY 4682639 secY Campylobacter jejuni subsp. jejuni 81-176 preprotein translocase subunit SecY YP_001001332.1 1585547 R 354242 CDS YP_001001333.1 121613463 4682888 complement(1586812..1587204) 1 NC_008787.1 late assembly protein; 50S ribosomal protein L15 1587204 rplO 4682888 rplO Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L15 YP_001001333.1 1586812 R 354242 CDS YP_001001334.1 121612804 4682719 complement(1587209..1587652) 1 NC_008787.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1587652 rpsE 4682719 rpsE Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S5 YP_001001334.1 1587209 R 354242 CDS YP_001001335.1 121613716 4683542 complement(1587664..1588020) 1 NC_008787.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1588020 rplR 4683542 rplR Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L18 YP_001001335.1 1587664 R 354242 CDS YP_001001336.1 121612149 4682441 complement(1588030..1588566) 1 NC_008787.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1588566 rplF 4682441 rplF Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L6 YP_001001336.1 1588030 R 354242 CDS YP_001001337.1 121612996 4682576 complement(1588645..1589040) 1 NC_008787.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1589040 rpsH 4682576 rpsH Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S8 YP_001001337.1 1588645 R 354242 CDS YP_001001338.1 121612286 4683302 complement(1589050..1589235) 1 NC_008787.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 1589235 rpsN 4683302 rpsN Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S14 YP_001001338.1 1589050 R 354242 CDS YP_001001339.1 121613307 4682447 complement(1589237..1589782) 1 NC_008787.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1589782 rplE 4682447 rplE Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L5 YP_001001339.1 1589237 R 354242 CDS YP_001001340.1 121613673 4682947 complement(1589786..1590019) 1 NC_008787.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1590019 rplX 4682947 rplX Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L24 YP_001001340.1 1589786 R 354242 CDS YP_001001341.1 121612746 4682967 complement(1590019..1590387) 1 NC_008787.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1590387 rplN 4682967 rplN Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L14 YP_001001341.1 1590019 R 354242 CDS YP_001001342.1 121612262 4683610 complement(1590387..1590638) 1 NC_008787.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1590638 rpsQ 4683610 rpsQ Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S17 YP_001001342.1 1590387 R 354242 CDS YP_001001343.1 121612974 4682493 complement(1590648..1590833) 1 NC_008787.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1590833 rpmC 4682493 rpmC Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L29 YP_001001343.1 1590648 R 354242 CDS YP_001001344.1 121613671 4683633 complement(1590820..1591245) 1 NC_008787.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1591245 rplP 4683633 rplP Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L16 YP_001001344.1 1590820 R 354242 CDS YP_001001345.1 121612744 4683273 complement(1591248..1591949) 1 NC_008787.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1591949 rpsC 4683273 rpsC Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S3 YP_001001345.1 1591248 R 354242 CDS YP_001001346.1 121612702 4683608 complement(1591949..1592392) 1 NC_008787.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1592392 rplV 4683608 rplV Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L22 YP_001001346.1 1591949 R 354242 CDS YP_001001347.1 121613627 4683665 complement(1592403..1592684) 1 NC_008787.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1592684 rpsS 4683665 rpsS Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S19 YP_001001347.1 1592403 R 354242 CDS YP_001001348.1 121612340 4682594 complement(1592686..1593516) 1 NC_008787.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1593516 rplB 4682594 rplB Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L2 YP_001001348.1 1592686 R 354242 CDS YP_001001349.1 121613281 4682349 complement(1593518..1593799) 1 NC_008787.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1593799 rplW 4682349 rplW Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L23 YP_001001349.1 1593518 R 354242 CDS YP_001001350.1 121612191 4682957 complement(1593802..1594416) 1 NC_008787.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1594416 rplD 4682957 rplD Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L4 YP_001001350.1 1593802 R 354242 CDS YP_001001351.1 121613090 4682650 complement(1594413..1594988) 1 NC_008787.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1594988 rplC 4682650 rplC Campylobacter jejuni subsp. jejuni 81-176 50S ribosomal protein L3 YP_001001351.1 1594413 R 354242 CDS YP_001001352.1 121613565 4683175 complement(1594998..1595309) 1 NC_008787.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1595309 rpsJ 4683175 rpsJ Campylobacter jejuni subsp. jejuni 81-176 30S ribosomal protein S10 YP_001001352.1 1594998 R 354242 CDS YP_001001353.1 121612851 4682146 complement(1595507..1596268) 1 NC_008787.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein 1596268 4682146 CJJ81176_0003 Campylobacter jejuni subsp. jejuni 81-176 RNA pseudouridine synthase family protein YP_001001353.1 1595507 R 354242 CDS YP_001001354.1 121613382 4683471 complement(1596303..1598291) 1 NC_008787.1 identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; metallo-beta-lactamase family protein 1598291 4683471 CJJ81176_0004 Campylobacter jejuni subsp. jejuni 81-176 metallo-beta-lactamase family protein YP_001001354.1 1596303 R 354242 CDS YP_001001355.1 121612576 4682838 complement(1598266..1599066) 1 NC_008787.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1599066 ksgA 4682838 ksgA Campylobacter jejuni subsp. jejuni 81-176 dimethyladenosine transferase YP_001001355.1 1598266 R 354242 CDS YP_001001356.1 121612899 4682701 1599146..1599682 1 NC_008787.1 hypothetical protein 1599682 4682701 CJJ81176_0006 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001356.1 1599146 D 354242 CDS YP_001001357.1 121612139 4683415 1599705..1600775 1 NC_008787.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1600775 4683415 CJJ81176_0007 Campylobacter jejuni subsp. jejuni 81-176 ribosomal RNA large subunit methyltransferase N YP_001001357.1 1599705 D 354242 CDS YP_001001358.1 121612685 4682483 1601640..1602251 1 NC_008787.1 lipopolysaccharide core biosynthesis protien, putative 1602251 4682483 CJJ81176_0010 Campylobacter jejuni subsp. jejuni 81-176 lipopolysaccharide core biosynthesis protien, putative YP_001001358.1 1601640 D 354242 CDS YP_001001359.1 121613415 4682571 1602572..1603102 1 NC_008787.1 identified by match to protein family HMM PF00583; acetyltransferase 1603102 4682571 CJJ81176_0013 Campylobacter jejuni subsp. jejuni 81-176 acetyltransferase YP_001001359.1 1602572 D 354242 CDS YP_001001360.1 121613666 4682782 complement(1603082..1603684) 1 NC_008787.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 1603684 leuD 4682782 leuD Campylobacter jejuni subsp. jejuni 81-176 isopropylmalate isomerase small subunit YP_001001360.1 1603082 R 354242 CDS YP_001001361.1 121612890 4682418 complement(1603686..1605092) 1 NC_008787.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1605092 leuC 4682418 leuC Campylobacter jejuni subsp. jejuni 81-176 isopropylmalate isomerase large subunit YP_001001361.1 1603686 R 354242 CDS YP_001001362.1 121613629 4683356 complement(1605085..1606161) 1 NC_008787.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1606161 leuB 4683356 leuB Campylobacter jejuni subsp. jejuni 81-176 3-isopropylmalate dehydrogenase YP_001001362.1 1605085 R 354242 CDS YP_001001363.1 121612265 4683377 complement(1606158..1607693) 1 NC_008787.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1607693 leuA 4683377 leuA Campylobacter jejuni subsp. jejuni 81-176 2-isopropylmalate synthase YP_001001363.1 1606158 R 354242 CDS YP_001001364.1 121612963 4682489 1608013..1608642 1 NC_008787.1 hypothetical protein 1608642 4682489 CJJ81176_0018 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001364.1 1608013 D 354242 CDS YP_001001365.1 121612442 4683337 complement(1608678..1609322) 1 NC_008787.1 hypothetical protein 1609322 4683337 CJJ81176_0019 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001365.1 1608678 R 354242 CDS YP_001001366.1 121613010 4682180 complement(1609460..1609843) 1 NC_008787.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1609843 4682180 CJJ81176_0020 Campylobacter jejuni subsp. jejuni 81-176 7-cyano-7-deazaguanine reductase YP_001001366.1 1609460 R 354242 CDS YP_001001367.1 121612485 4683274 1610003..1610602 1 NC_008787.1 identified by match to protein family HMM PF07992; hypothetical protein 1610602 4683274 CJJ81176_0021 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001367.1 1610003 D 354242 CDS YP_001001368.1 121613233 4683755 complement(1610607..1611488) 1 NC_008787.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 1611488 metA 4683755 metA Campylobacter jejuni subsp. jejuni 81-176 homoserine O-succinyltransferase YP_001001368.1 1610607 R 354242 CDS YP_001001369.1 121613491 4683013 complement(1611571..1612842) 1 NC_008787.1 identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326; homoserine O-acetyltransferase 1612842 metX 4683013 metX Campylobacter jejuni subsp. jejuni 81-176 homoserine O-acetyltransferase YP_001001369.1 1611571 R 354242 CDS YP_001001370.1 121613432 4682712 complement(1613087..1613242) 1 NC_008787.1 hypothetical protein 1613242 4682712 CJJ81176_0024 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001001370.1 1613087 R 354242 CDS YP_001001371.1 121613214 4682758 complement(1613268..1615784) 1 NC_008787.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1615784 flgE 4682758 flgE Campylobacter jejuni subsp. jejuni 81-176 flagellar hook protein FlgE YP_001001371.1 1613268 R 354242 CDS YP_001001372.1 121612651 4683036 complement(1615977..1616459) 1 NC_008787.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1616459 ruvC 4683036 ruvC Campylobacter jejuni subsp. jejuni 81-176 Holliday junction resolvase YP_001001372.1 1615977 R 354242 CDS YP_001004005.1 121999252 4711580 66..1139 1 NC_008790.1 hypothetical protein 1139 4711580 CJJ81176_pTet0001 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004005.1 66 D 354242 CDS YP_001004006.1 121999253 4711559 1313..1501 1 NC_008790.1 hypothetical protein 1501 4711559 CJJ81176_pTet0002 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004006.1 1313 D 354242 CDS YP_001004007.1 121999254 4711561 1416..1796 1 NC_008790.1 cpp7 1796 4711561 CJJ81176_pTet0003 Campylobacter jejuni subsp. jejuni 81-176 cpp7 YP_001004007.1 1416 D 354242 CDS YP_001004008.1 121999255 4711602 1938..2336 1 NC_008790.1 cpp8 2336 4711602 CJJ81176_pTet0004 Campylobacter jejuni subsp. jejuni 81-176 cpp8 YP_001004008.1 1938 D 354242 CDS YP_001004009.1 121999256 4711557 2333..2845 1 NC_008790.1 cpp9 2845 4711557 CJJ81176_pTet0005 Campylobacter jejuni subsp. jejuni 81-176 cpp9 YP_001004009.1 2333 D 354242 CDS YP_001004010.1 121999257 4711560 2842..3399 1 NC_008790.1 cpp10 3399 4711560 CJJ81176_pTet0006 Campylobacter jejuni subsp. jejuni 81-176 cpp10 YP_001004010.1 2842 D 354242 CDS YP_001004011.1 121999258 4711563 3404..3670 1 NC_008790.1 cpp11 3670 4711563 CJJ81176_pTet0007 Campylobacter jejuni subsp. jejuni 81-176 cpp11 YP_001004011.1 3404 D 354242 CDS YP_001004012.1 121999259 4711605 3729..4289 1 NC_008790.1 cpp12 4289 4711605 CJJ81176_pTet0008 Campylobacter jejuni subsp. jejuni 81-176 cpp12 YP_001004012.1 3729 D 354242 CDS YP_001004013.1 121999260 4711569 4292..4558 1 NC_008790.1 cpp13 4558 4711569 CJJ81176_pTet0009 Campylobacter jejuni subsp. jejuni 81-176 cpp13 YP_001004013.1 4292 D 354242 CDS YP_001004014.1 121999261 4711562 4605..10403 1 NC_008790.1 identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF02384; match to protein family HMM PF04851; cpp14 10403 4711562 CJJ81176_pTet0010 Campylobacter jejuni subsp. jejuni 81-176 cpp14 YP_001004014.1 4605 D 354242 CDS YP_001004015.1 121999262 4711571 complement(10425..11129) 1 NC_008790.1 cpp16 11129 4711571 CJJ81176_pTet0011 Campylobacter jejuni subsp. jejuni 81-176 cpp16 YP_001004015.1 10425 R 354242 CDS YP_001004016.1 121999263 4711606 complement(11155..12543) 1 NC_008790.1 cpp17 12543 4711606 CJJ81176_pTet0012 Campylobacter jejuni subsp. jejuni 81-176 cpp17 YP_001004016.1 11155 R 354242 CDS YP_001004017.1 121999264 4711568 complement(12543..13094) 1 NC_008790.1 cpp18 13094 4711568 CJJ81176_pTet0013 Campylobacter jejuni subsp. jejuni 81-176 cpp18 YP_001004017.1 12543 R 354242 CDS YP_001004018.1 121999265 4711564 13295..13576 1 NC_008790.1 cpp19 13576 4711564 CJJ81176_pTet0014 Campylobacter jejuni subsp. jejuni 81-176 cpp19 YP_001004018.1 13295 D 354242 CDS YP_001004019.1 121999266 4711572 13605..14216 1 NC_008790.1 cpp20 14216 4711572 CJJ81176_pTet0015 Campylobacter jejuni subsp. jejuni 81-176 cpp20 YP_001004019.1 13605 D 354242 CDS YP_001004020.1 121999267 4711608 14220..14873 1 NC_008790.1 cpp21 14873 4711608 CJJ81176_pTet0016 Campylobacter jejuni subsp. jejuni 81-176 cpp21 YP_001004020.1 14220 D 354242 CDS YP_001004021.1 121999268 4711573 14992..16218 1 NC_008790.1 cpp22 16218 4711573 CJJ81176_pTet0017 Campylobacter jejuni subsp. jejuni 81-176 cpp22 YP_001004021.1 14992 D 354242 CDS YP_001004022.1 121999269 4711567 16326..16589 1 NC_008790.1 cpp23 16589 4711567 CJJ81176_pTet0018 Campylobacter jejuni subsp. jejuni 81-176 cpp23 YP_001004022.1 16326 D 354242 CDS YP_001004023.1 121999270 4711574 complement(16811..17068) 1 NC_008790.1 hypothetical protein 17068 4711574 CJJ81176_pTet0019 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004023.1 16811 R 354242 CDS YP_001004024.1 121999271 4711607 complement(17102..17287) 1 NC_008790.1 hypothetical protein 17287 4711607 CJJ81176_pTet0020 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004024.1 17102 R 354242 CDS YP_001004025.1 121999272 4711575 17560..17778 1 NC_008790.1 identified by match to protein family HMM PF03681; hypothetical protein 17778 4711575 CJJ81176_pTet0021 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004025.1 17560 D 354242 CDS YP_001004026.1 121999273 4711565 17771..17974 1 NC_008790.1 identified by match to protein family HMM PF07927; hypothetical protein 17974 4711565 CJJ81176_pTet0022 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004026.1 17771 D 354242 CDS YP_001004027.1 121999274 4711558 17978..19771 1 NC_008790.1 cpp26 19771 4711558 CJJ81176_pTet0023 Campylobacter jejuni subsp. jejuni 81-176 cpp26 YP_001004027.1 17978 D 354242 CDS YP_001004028.1 121999275 4711603 complement(19894..20508) 1 NC_008790.1 identified by match to protein family HMM PF00239; cpp27 20508 4711603 CJJ81176_pTet0024 Campylobacter jejuni subsp. jejuni 81-176 cpp27 YP_001004028.1 19894 R 354242 CDS YP_001004029.1 121999276 4711577 complement(20505..20882) 1 NC_008790.1 hypothetical protein 20882 4711577 CJJ81176_pTet0025 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004029.1 20505 R 354242 CDS YP_001004030.1 121999277 4711570 complement(20873..21196) 1 NC_008790.1 cpp29 21196 4711570 CJJ81176_pTet0026 Campylobacter jejuni subsp. jejuni 81-176 cpp29 YP_001004030.1 20873 R 354242 CDS YP_001004031.1 121999278 4711576 21367..21630 1 NC_008790.1 cmgB2 21630 4711576 CJJ81176_pTet0027 Campylobacter jejuni subsp. jejuni 81-176 cmgB2 YP_001004031.1 21367 D 354242 CDS YP_001004032.1 121999279 4711578 21643..24411 1 NC_008790.1 identified by match to protein family HMM PF03135; match to protein family HMM PF05101; cmgB3/4 24411 4711578 CJJ81176_pTet0028 Campylobacter jejuni subsp. jejuni 81-176 cmgB3/4 YP_001004032.1 21643 D 354242 CDS YP_001004033.1 121999280 4711585 24422..24988 1 NC_008790.1 identified by match to protein family HMM TIGR02681; cpp32 24988 4711585 CJJ81176_pTet0029 Campylobacter jejuni subsp. jejuni 81-176 cpp32 YP_001004033.1 24422 D 354242 CDS YP_001004034.1 121999281 4711601 24985..25650 1 NC_008790.1 cpp33 25650 4711601 CJJ81176_pTet0030 Campylobacter jejuni subsp. jejuni 81-176 cpp33 YP_001004034.1 24985 D 354242 CDS YP_001004035.1 121999282 4711586 25684..26109 1 NC_008790.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein family 26109 4711586 CJJ81176_pTet0031 Campylobacter jejuni subsp. jejuni 81-176 single-strand binding protein family YP_001004035.1 25684 D 354242 CDS YP_001004036.1 121999283 4711566 26125..26400 1 NC_008790.1 cpp35 26400 4711566 CJJ81176_pTet0032 Campylobacter jejuni subsp. jejuni 81-176 cpp35 YP_001004036.1 26125 D 354242 CDS YP_001004037.1 121999284 4711588 26404..27375 1 NC_008790.1 cmgB5 27375 4711588 CJJ81176_pTet0033 Campylobacter jejuni subsp. jejuni 81-176 cmgB5 YP_001004037.1 26404 D 354242 CDS YP_001004038.1 121999285 4711599 27372..28370 1 NC_008790.1 identified by match to protein family HMM PF04610; cmgB6 28370 4711599 CJJ81176_pTet0034 Campylobacter jejuni subsp. jejuni 81-176 cmgB6 YP_001004038.1 27372 D 354242 CDS YP_001004039.1 121999286 4711581 28360..28527 1 NC_008790.1 hypothetical protein 28527 4711581 CJJ81176_pTet0035 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004039.1 28360 D 354242 CDS YP_001004040.1 121999287 4711579 28517..29179 1 NC_008790.1 identified by match to protein family HMM PF04335; cmgB8 29179 4711579 CJJ81176_pTet0036 Campylobacter jejuni subsp. jejuni 81-176 cmgB8 YP_001004040.1 28517 D 354242 CDS YP_001004041.1 121999288 4711589 29176..30063 1 NC_008790.1 identified by match to protein family HMM PF03524; match to protein family HMM TIGR02781; cmgB9 30063 4711589 CJJ81176_pTet0037 Campylobacter jejuni subsp. jejuni 81-176 cmgB9 YP_001004041.1 29176 D 354242 CDS YP_001004042.1 121999289 4711600 30090..31265 1 NC_008790.1 identified by match to protein family HMM PF03743; cmgB10 31265 4711600 CJJ81176_pTet0038 Campylobacter jejuni subsp. jejuni 81-176 cmgB10 YP_001004042.1 30090 D 354242 CDS YP_001004043.1 121999290 4711582 31246..32238 1 NC_008790.1 identified by match to protein family HMM PF00437; match to protein family HMM TIGR02788; cmgB11 32238 4711582 CJJ81176_pTet0039 Campylobacter jejuni subsp. jejuni 81-176 cmgB11 YP_001004043.1 31246 D 354242 CDS YP_001004044.1 121999291 4711590 32239..34050 1 NC_008790.1 identified by match to protein family HMM PF02534; cmgD4 34050 4711590 CJJ81176_pTet0040 Campylobacter jejuni subsp. jejuni 81-176 cmgD4 YP_001004044.1 32239 D 354242 CDS YP_001004045.1 121999292 4711583 34031..34468 1 NC_008790.1 cpp44 34468 4711583 CJJ81176_pTet0041 Campylobacter jejuni subsp. jejuni 81-176 cpp44 YP_001004045.1 34031 D 354242 CDS YP_001004046.1 121999293 4711604 34480..35244 1 NC_008790.1 identified by match to protein family HMM PF07424; cpp45 35244 4711604 CJJ81176_pTet0042 Campylobacter jejuni subsp. jejuni 81-176 cpp45 YP_001004046.1 34480 D 354242 CDS YP_001004047.1 121999294 4711592 35247..36044 1 NC_008790.1 cpp46 36044 4711592 CJJ81176_pTet0043 Campylobacter jejuni subsp. jejuni 81-176 cpp46 YP_001004047.1 35247 D 354242 CDS YP_001004048.1 121999295 4711584 36115..36735 1 NC_008790.1 cpp47 36735 4711584 CJJ81176_pTet0044 Campylobacter jejuni subsp. jejuni 81-176 cpp47 YP_001004048.1 36115 D 354242 CDS YP_001004049.1 121999296 4711593 36999..39191 1 NC_008790.1 identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01056; DNA topoisomerase III 39191 4711593 CJJ81176_pTet0045 Campylobacter jejuni subsp. jejuni 81-176 DNA topoisomerase III YP_001004049.1 36999 D 354242 CDS YP_001004050.1 121999297 4711596 39297..40718 1 NC_008790.1 cpp50 40718 4711596 CJJ81176_pTet0046 Campylobacter jejuni subsp. jejuni 81-176 cpp50 YP_001004050.1 39297 D 354242 CDS YP_001004051.1 121999298 4711591 40737..40916 1 NC_008790.1 hypothetical protein 40916 4711591 CJJ81176_pTet0047 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004051.1 40737 D 354242 CDS YP_001004052.1 121999299 4711598 41275..43194 1 NC_008790.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; tetO 43194 4711598 CJJ81176_pTet0048 Campylobacter jejuni subsp. jejuni 81-176 tetO YP_001004052.1 41275 D 354242 CDS YP_001004053.1 121999300 4711594 43589..43771 1 NC_008790.1 hypothetical protein 43771 4711594 CJJ81176_pTet0049 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004053.1 43589 D 354242 CDS YP_001004054.1 121999301 4711587 43962..44285 1 NC_008790.1 hypothetical protein 44285 4711587 CJJ81176_pTet0050 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004054.1 43962 D 354242 CDS YP_001004055.1 121999302 4711595 complement(44244..44600) 1 NC_008790.1 hypothetical protein 44600 4711595 CJJ81176_pTet0051 Campylobacter jejuni subsp. jejuni 81-176 hypothetical protein YP_001004055.1 44244 R 354242 CDS YP_001004056.1 121999303 4711597 44772..45002 1 NC_008790.1 cpp4 45002 4711597 CJJ81176_pTet0052 Campylobacter jejuni subsp. jejuni 81-176 cpp4 YP_001004056.1 44772 D 354242 CDS