-- dump date 20140619_020819 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 768670000001 SEQ_END SEQ_END NC_014749.1 58717 58717 DR NC_014749.1; contig end 58717..58717 Calditerrivibrio nitroreducens DSM 19672 768670000002 SEQ_END SEQ_END NC_014758.1 2157835 2157835 DR NC_014758.1; contig end 2157835..2157835 Calditerrivibrio nitroreducens DSM 19672 YP_004046699.1 CDS Calni_2070 NC_014749.1 679 906 R KEGG: act:ACLA_065780 sugar transporter, putative; SPTR: Sugar transporter, putative; sugar transporter, putative complement(679..906) Calditerrivibrio nitroreducens DSM 19672 10004271 YP_004046700.1 CDS Calni_2072 NC_014749.1 1818 3566 R InterPro IPR002917; KEGG: dap:Dacet_0622 GTP-binding protein HSR1-related protein; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein HSR1-related protein; PFAM: Dynamin family; GTP-binding protein HSR1-related protein complement(1818..3566) Calditerrivibrio nitroreducens DSM 19672 10004273 YP_004046701.1 CDS Calni_2073 NC_014749.1 3689 5941 R KEGG: dap:Dacet_0621 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dynamin family; hypothetical protein complement(3689..5941) Calditerrivibrio nitroreducens DSM 19672 10004274 YP_004046702.1 CDS Calni_2074 NC_014749.1 5954 7654 R KEGG: dap:Dacet_0620 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dynamin family; hypothetical protein complement(5954..7654) Calditerrivibrio nitroreducens DSM 19672 10004275 YP_004046703.1 CDS Calni_2075 NC_014749.1 7954 8061 D hypothetical protein 7954..8061 Calditerrivibrio nitroreducens DSM 19672 10004276 YP_004046704.1 CDS Calni_2076 NC_014749.1 8179 8586 D COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: aar:Acear_1998 transposase IS200-family protein; PFAM: transposase IS200-family protein; SPTR: Transposase IS200-family protein; PFAM: Transposase IS200 like; transposase IS200-family protein 8179..8586 Calditerrivibrio nitroreducens DSM 19672 10004277 YP_004046705.1 CDS Calni_2077 NC_014749.1 8586 9791 D COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095: IPR001959; KEGG: cyc:PCC7424_2948 transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, IS605 OrfB family 8586..9791 Calditerrivibrio nitroreducens DSM 19672 10004278 YP_004046706.1 CDS Calni_2078 NC_014749.1 10100 10339 D KEGG: fps:FP2181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 10100..10339 Calditerrivibrio nitroreducens DSM 19672 10004279 YP_004046707.1 CDS Calni_2079 NC_014749.1 11137 12675 D InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_0353 hypothetical protein; PFAM: AAA-ATPase-like; protein of unknown function DUF1703; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase; AAA-ATPase 11137..12675 Calditerrivibrio nitroreducens DSM 19672 10004280 YP_004046708.1 CDS Calni_2080 NC_014749.1 12894 14942 D InterPro IPR006626; KEGG: cbr:CBG18961 C. briggsae CBR-DRE-1 protein; SPTR: Heat shock protein 70; hypothetical protein 12894..14942 Calditerrivibrio nitroreducens DSM 19672 10004281 YP_004046709.1 CDS Calni_2081 NC_014749.1 14982 16511 D COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593: IPR003959; KEGG: alv:Alvin_1450 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: ATPase, AAA family; PFAM: ATPase family associated with various cellular activities (AAA); AAA ATPase central domain protein 14982..16511 Calditerrivibrio nitroreducens DSM 19672 10004282 YP_004046710.1 CDS Calni_2082 NC_014749.1 16526 16840 D KEGG: pfa:PF13_0047 conserved Plasmodium protein, unknown function; SPTR: Putative uncharacterized protein; hypothetical protein 16526..16840 Calditerrivibrio nitroreducens DSM 19672 10004283 YP_004046711.1 CDS Calni_2083 NC_014749.1 16860 17300 D KEGG: msi:Msm_0335 glutamyl-tRNA(Gln) amidotransferase subunit E; SPTR: Methyl-accepting chemotaxis protein; hypothetical protein 16860..17300 Calditerrivibrio nitroreducens DSM 19672 10004284 YP_004046712.1 CDS Calni_2084 NC_014749.1 17742 18872 D InterPro IPR018631; KEGG: ddf:DEFDS_1269 hypothetical protein; PFAM: AAA-ATPase-like; SPTR: Putative uncharacterized protein; PFAM: Predicted AAA-ATPase; AAA-ATPase 17742..18872 Calditerrivibrio nitroreducens DSM 19672 10004285 YP_004046713.1 CDS Calni_2086 NC_014749.1 19472 19669 R KEGG: ddf:DEFDS_P065 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(19472..19669) Calditerrivibrio nitroreducens DSM 19672 10004287 YP_004046714.1 CDS Calni_2087 NC_014749.1 19934 20890 D COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: ddf:DEFDS_P066 site-specific recombinase, phage integrase family; PFAM: integrase family protein; SPTR: Site-specific recombinase, phage integrase family; PFAM: Phage integrase family; integrase family protein 19934..20890 Calditerrivibrio nitroreducens DSM 19672 10004288 YP_004046715.1 CDS Calni_2089 NC_014749.1 22734 24029 D COGs: COG1373 ATPase (AAA+ superfamily); KEGG: dap:Dacet_1071 ATPase; SPTR: ATPase; ATPase 22734..24029 Calditerrivibrio nitroreducens DSM 19672 10004290 YP_004046716.1 CDS Calni_2090 NC_014749.1 24212 24952 R COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: wsu:WS0385 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SPTR: Sel1 repeat-containing domain protein; PFAM: Sel1 repeat; Sel1 domain protein repeat-containing protein complement(24212..24952) Calditerrivibrio nitroreducens DSM 19672 10004291 YP_004046717.1 CDS Calni_2091 NC_014749.1 25259 26230 R InterPro IPR004437: IPR003115; KEGG: ddf:DEFDS_P213 hypothetical protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Putative uncharacterized protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; parB-like partition protein complement(25259..26230) Calditerrivibrio nitroreducens DSM 19672 10004292 YP_004046718.1 CDS Calni_2092 NC_014749.1 26217 27122 R COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: ddf:DEFDS_P212 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; hypothetical protein complement(26217..27122) Calditerrivibrio nitroreducens DSM 19672 10004293 YP_004046719.1 CDS Calni_2093 NC_014749.1 27132 28589 R COGs: COG0593 ATPase involved in DNA replication initiation; InterPro IPR003593: IPR020591: IPR013317; KEGG: ddf:DEFDS_P211 hypothetical protein; PFAM: Chromosomal replication initiator DnaA; SMART: AAA ATPase; SPTR: Chromosomal replication initiator protein dnaA; PFAM: Bacterial dnaA protein; Chromosomal replication initiator DnaA complement(27132..28589) Calditerrivibrio nitroreducens DSM 19672 10004294 YP_004046720.1 CDS Calni_2094 NC_014749.1 28981 29439 D COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: cob:COB47_2235 transposase IS200-family protein; PFAM: transposase IS200-family protein; SPTR: Transposase IS200-family protein; PFAM: Transposase IS200 like; transposase IS200-family protein 28981..29439 Calditerrivibrio nitroreducens DSM 19672 10004295 YP_004046721.1 CDS Calni_2095 NC_014749.1 29423 30631 D COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095: IPR001959; KEGG: sul:SYO3AOP1_1391 transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, IS605 OrfB family 29423..30631 Calditerrivibrio nitroreducens DSM 19672 10004296 YP_004046722.1 CDS Calni_2096 NC_014749.1 30991 31239 D hypothetical protein 30991..31239 Calditerrivibrio nitroreducens DSM 19672 10004297 YP_004046723.1 CDS Calni_2097 NC_014749.1 31510 32616 D COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: nth:Nther_2336 transposase mutator type; PFAM: transposase mutator type; SPTR: Transposase mutator type; PFAM: Transposase, Mutator family; transposase mutator type 31510..32616 Calditerrivibrio nitroreducens DSM 19672 10004298 YP_004046724.1 CDS Calni_2098 NC_014749.1 32609 32782 D hypothetical protein 32609..32782 Calditerrivibrio nitroreducens DSM 19672 10004299 YP_004046725.1 CDS Calni_2099 NC_014749.1 33539 33736 R KEGG: xla:380019 ADP-ribosylation factor GTPase activating protein 3; SPTR: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_0; ADP-ribosylation factor GTPase activating protein 3 complement(33539..33736) Calditerrivibrio nitroreducens DSM 19672 10004300 YP_004046726.1 CDS Calni_2100 NC_014749.1 34105 34971 D COGs: COG0863 DNA modification methylase; InterPro IPR001091: IPR017985: IPR018312: IPR002941; KEGG: cyc:PCC7424_4192 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; DNA methylase N-4/N-6 domain protein 34105..34971 Calditerrivibrio nitroreducens DSM 19672 10004301 YP_004046727.1 CDS Calni_2101 NC_014749.1 34987 35571 D InterPro IPR003615: IPR002711; KEGG: ele:Elen_0844 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease domain protein; PFAM: HNH endonuclease; HNH endonuclease 34987..35571 Calditerrivibrio nitroreducens DSM 19672 10004302 YP_004046728.1 CDS Calni_2102 NC_014749.1 36017 36358 R InterPro IPR001173; KEGG: ant:Arnit_2325 family 2 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; glycosyl transferase family 2 complement(36017..36358) Calditerrivibrio nitroreducens DSM 19672 10004303 YP_004046729.1 CDS Calni_2103 NC_014749.1 36436 36624 R KEGG: pyo:PY01987 CCAAT-box DNA binding protein subunit B; SPTR: CCAAT-box DNA binding protein subunit B, putative; CCAAT-box DNA binding protein subunit B complement(36436..36624) Calditerrivibrio nitroreducens DSM 19672 10004304 YP_004046730.1 CDS Calni_2104 NC_014749.1 36643 36807 R hypothetical protein complement(36643..36807) Calditerrivibrio nitroreducens DSM 19672 10004305 YP_004046731.1 CDS Calni_2105 NC_014749.1 37012 37248 D KEGG: ecp:ECP_3803 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 37012..37248 Calditerrivibrio nitroreducens DSM 19672 10004306 YP_004046732.1 CDS Calni_2106 NC_014749.1 37428 38966 D InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_0353 hypothetical protein; PFAM: AAA-ATPase-like; protein of unknown function DUF1703; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase; AAA-ATPase 37428..38966 Calditerrivibrio nitroreducens DSM 19672 10004307 YP_004046733.1 CDS Calni_2107 NC_014749.1 39095 40642 D InterPro IPR018631: IPR012547; KEGG: saf:SULAZ_0529 conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain; PFAM: AAA-ATPase-like; protein of unknown function DUF1703; SPTR: Conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain; PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase; AAA-ATPase 39095..40642 Calditerrivibrio nitroreducens DSM 19672 10004308 YP_004046734.1 CDS Calni_2108 NC_014749.1 40869 41609 R InterPro IPR000412: IPR013526: IPR013525; KEGG: ddf:DEFDS_2063 ABC transporter permease; PFAM: ABC-2 type transporter; SPTR: ABC transporter, permease; PFAM: ABC-2 type transporter; ABC-2 type transporter complement(40869..41609) Calditerrivibrio nitroreducens DSM 19672 10004309 YP_004046735.1 CDS Calni_2109 NC_014749.1 41606 42457 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: ddf:DEFDS_2062 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter related protein complement(41606..42457) Calditerrivibrio nitroreducens DSM 19672 10004310 YP_004046736.1 CDS Calni_2110 NC_014749.1 42786 44120 D COGs: COG1797 Cobyrinic acid a c-diamide synthase; InterPro IPR004484: IPR017929: IPR011698; KEGG: ddf:DEFDS_2061 cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; SPTR: Cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 42786..44120 Calditerrivibrio nitroreducens DSM 19672 10004311 YP_004046737.1 CDS Calni_2111 NC_014749.1 44122 45111 D COGs: COG4822 Cobalamin biosynthesis protein CbiK Co2+ chelatase; InterPro IPR010388: IPR019758; KEGG: ddf:DEFDS_2060 sirohydrochlorin cobaltochelatase; PFAM: anaerobic cobalt chelatase; PRIAM: Sirohydrochlorin cobaltochelatase; SPTR: Sirohydrochlorin cobaltochelatase; PFAM: Cobalt chelatase (CbiK); Sirohydrochlorin cobaltochelatase 44122..45111 Calditerrivibrio nitroreducens DSM 19672 10004312 YP_004046738.1 CDS Calni_2112 NC_014749.1 45108 46049 D COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ddf:DEFDS_2059 iron ABC transporter permease; PFAM: transport system permease protein; SPTR: Iron ABC transporter, permease; PFAM: FecCD transport family; transport system permease protein 45108..46049 Calditerrivibrio nitroreducens DSM 19672 10004313 YP_004046739.1 CDS Calni_2113 NC_014749.1 46042 46782 D COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593: IPR003439: IPR017871; KEGG: ddf:DEFDS_2058 iron ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Iron ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter related protein 46042..46782 Calditerrivibrio nitroreducens DSM 19672 10004314 YP_004046740.1 CDS Calni_2114 NC_014749.1 46727 47521 D COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: ddf:DEFDS_2057 iron ABC transporter substrate-binding protein; PFAM: periplasmic binding protein; SPTR: Iron ABC transporter, substrate-binding protein; PFAM: Periplasmic binding protein; periplasmic binding protein 46727..47521 Calditerrivibrio nitroreducens DSM 19672 10004315 YP_004046741.1 CDS Calni_2115 NC_014749.1 47518 48279 D COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366: IPR003043: IPR000878; KEGG: ddf:DEFDS_2056 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 47518..48279 Calditerrivibrio nitroreducens DSM 19672 10004316 YP_004046742.1 CDS Calni_2116 NC_014749.1 48267 48974 D COGs: COG2243 Precorrin-2 methylase; InterPro IPR006364: IPR012382: IPR000878; KEGG: ddf:DEFDS_2055 precorrin-2 C(20)-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Precorrin-2 C(20)-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase; precorrin-2 C20-methyltransferase 48267..48974 Calditerrivibrio nitroreducens DSM 19672 10004317 YP_004046743.1 CDS Calni_2117 NC_014749.1 48967 49584 D COGs: COG2082 Precorrin isomerase; InterPro IPR003722; KEGG: ddf:DEFDS_2054 precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH; PRIAM: Precorrin-8X methylmutase; SPTR: Precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase; Precorrin-8X methylmutase 48967..49584 Calditerrivibrio nitroreducens DSM 19672 10004318 YP_004046744.1 CDS Calni_2118 NC_014749.1 49577 50272 D COGs: COG2099 Precorrin-6x reductase; InterPro IPR003723; KEGG: ddf:DEFDS_2053 precorrin-6A reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; SPTR: Precorrin-6A reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase; precorrin-6x reductase 49577..50272 Calditerrivibrio nitroreducens DSM 19672 10004319 YP_004046745.1 CDS Calni_2119 NC_014749.1 50471 51532 D COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004838: IPR004839; KEGG: ddf:DEFDS_2048 L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; SPTR: L-threonine-O-3-phosphate decarboxylase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; aminotransferase class I and II 50471..51532 Calditerrivibrio nitroreducens DSM 19672 10004320 YP_004046746.1 CDS Calni_2120 NC_014749.1 51528 52967 D COGs: COG1492 Cobyric acid synthase; InterPro IPR004459: IPR017929: IPR011698; KEGG: ddf:DEFDS_2047 adenosylcobyric acid synthase (glutamine-hydrolyzing); PFAM: CobB/CobQ domain protein glutamine amidotransferase; SPTR: Cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; manually curated; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ; cobyric acid synthase CobQ 51528..52967 Calditerrivibrio nitroreducens DSM 19672 10004321 YP_004046747.1 CDS Calni_2121 NC_014749.1 52960 53907 D COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB; InterPro IPR004485; KEGG: ddf:DEFDS_2046 adenosylcobinamide-phosphate synthase; PFAM: cobalamin biosynthesis protein CbiB; SPTR: Adenosylcobinamide-phosphate synthase; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD 52960..53907 Calditerrivibrio nitroreducens DSM 19672 10004322 YP_004046748.1 CDS Calni_2122 NC_014749.1 53888 54343 D COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: ddf:DEFDS_2045 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain; siroheme synthase 53888..54343 Calditerrivibrio nitroreducens DSM 19672 10004323 YP_004046749.1 CDS Calni_2123 NC_014749.1 54340 55314 D COGs: COG1903 Cobalamin biosynthesis protein CbiD; InterPro IPR002748; KEGG: ddf:DEFDS_2044 cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; SPTR: Putative cobalt-precorrin-6A synthase [deacetylating]; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD; cobalamin biosynthesis protein CbiD 54340..55314 Calditerrivibrio nitroreducens DSM 19672 10004324 YP_004046750.1 CDS Calni_2124 NC_014749.1 55307 55945 D COGs: COG2241 Precorrin-6B methylase 1; InterPro IPR012818: IPR000878; KEGG: ddf:DEFDS_2043 precorrin-6Y C(5,15)-methyltransferase (decarboxylating); PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Precorrin-6Y C(5,15)-methyltransferase (Decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 55307..55945 Calditerrivibrio nitroreducens DSM 19672 10004325 YP_004046751.1 CDS Calni_2125 NC_014749.1 55942 56637 D COGs: COG2875 Precorrin-4 methylase; InterPro IPR006362: IPR003043: IPR000878; KEGG: ddf:DEFDS_2042 precorrin-4 C(11)-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Precorrin-4 C(11)-methyltransferase; SPTR: Precorrin-4 C(11)-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase; precorrin-4 C11-methyltransferase 55942..56637 Calditerrivibrio nitroreducens DSM 19672 10004326 YP_004046752.1 CDS Calni_2126 NC_014749.1 56685 57470 D COGs: COG2073 Cobalamin biosynthesis protein CbiG; InterPro IPR002750; KEGG: ddf:DEFDS_2041 cobalamin biosynthesis protein CbiG; PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; SPTR: Cobalamin biosynthesis protein CbiG; PFAM: Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal; cobalamin (vitamin B12) biosynthesis CbiG protein 56685..57470 Calditerrivibrio nitroreducens DSM 19672 10004327 YP_004046753.1 CDS Calni_2127 NC_014749.1 57463 58194 D COGs: COG1010 Precorrin-3B methylase; InterPro IPR006363: IPR000878; KEGG: ddf:DEFDS_2040 precorrin-3B C(17)-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PRIAM: Precorrin-3B C(17)-methyltransferase; SPTR: Precorrin-3B C(17)-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-3 methyltransferase 57463..58194 Calditerrivibrio nitroreducens DSM 19672 10004328 YP_004050081.1 CDS Calni_0001 NC_014758.1 74 1276 D COGs: COG1171 Threonine dehydratase; InterPro IPR000634: IPR005789: IPR001926: IPR002912; KEGG: ddf:DEFDS_2182 threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; SPTR: Threonine dehydratase; TIGRFAM: threonine dehydratase; manually curated; PFAM: ACT domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; l-threonine ammonia-lyase 74..1276 Calditerrivibrio nitroreducens DSM 19672 10010116 YP_004050082.1 CDS Calni_0002 NC_014758.1 1269 2600 D COGs: COG0593 ATPase involved in DNA replication initiation; InterPro IPR020591: IPR018312: IPR001957: IPR013317: IPR 013159: IPR003593; KEGG: ddf:DEFDS_2181 chromosome replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein dnaa 1269..2600 Calditerrivibrio nitroreducens DSM 19672 10008000 YP_004050083.1 CDS Calni_0003 NC_014758.1 2866 3972 D COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: dap:Dacet_2869 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 2866..3972 Calditerrivibrio nitroreducens DSM 19672 10008001 YP_004050084.1 CDS Calni_0004 NC_014758.1 3984 4991 D COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); InterPro IPR018078: IPR003395; KEGG: ddf:DEFDS_0002 hypothetical protein; PFAM: SMC domain protein; SPTR: uncharacterized protein; smc domain-containing protein 3984..4991 Calditerrivibrio nitroreducens DSM 19672 10008002 YP_004050085.1 CDS Calni_0005 NC_014758.1 4998 7388 D COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR001241: IPR000565: IPR018522: IPR000408: IPR 011557: IPR003594: IPR013506: IPR006171: IPR002288; KEGG: dap:Dacet_2871 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit b 4998..7388 Calditerrivibrio nitroreducens DSM 19672 10008003 YP_004050086.1 CDS Calni_0006 NC_014758.1 7409 9826 D COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005743: IPR002205: IPR006691; KEGG: ddf:DEFDS_0004 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit a 7409..9826 Calditerrivibrio nitroreducens DSM 19672 10008004 YP_004050087.1 CDS Calni_0007 NC_014758.1 9828 10685 D COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR000672: IPR020867: IPR020630: IPR020631; KEGG: dap:Dacet_2873 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; 5,10-methylenetetrahydrofolate dehydrogenase (nadp+); methenyltetrahydrofolate cyclohydrolase 9828..10685 Calditerrivibrio nitroreducens DSM 19672 10008005 YP_004050088.1 CDS Calni_0008 NC_014758.1 10687 12000 D COGs: COG0486 GTPase; InterPro IPR004520: IPR005225: IPR018948: IPR002917; KEGG: dap:Dacet_2874 tRNA modification GTPase TrmE; PFAM: GTP-binding protein HSR1-related; GTP-binding protein TrmE-like; SPTR: tRNA modification GTPase mnmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; tRNA modification GTPase trme 10687..12000 Calditerrivibrio nitroreducens DSM 19672 10008006 YP_004050089.1 CDS Calni_0009 NC_014758.1 12013 13878 D COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR020595: IPR004416: IPR002218; KEGG: ddf:DEFDS_0007 glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: glucose inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; glucose inhibited division protein a 12013..13878 Calditerrivibrio nitroreducens DSM 19672 10008007 YP_004050090.1 CDS Calni_0010 NC_014758.1 13871 14467 D COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682; KEGG: ddf:DEFDS_0008 glucose inhibited division protein B; PFAM: glucose inhibited division protein; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB; methyltransferase gidb 13871..14467 Calditerrivibrio nitroreducens DSM 19672 10008008 YP_004050091.1 CDS Calni_0011 NC_014758.1 14409 15293 D KEGG: apo:Arcpr_0792 MCM family protein; SPTR: MCM family protein; hypothetical protein 14409..15293 Calditerrivibrio nitroreducens DSM 19672 10008009 YP_004050092.1 CDS Calni_0012 NC_014758.1 15302 15976 D COGs: COG4892 heme/steroid binding protein; InterPro IPR001199; KEGG: ddf:DEFDS_0851 hypothetical protein; PFAM: cytochrome b5; SPTR: uncharacterized protein; PFAM: Cytochrome b5-like Heme/Steroid binding domain; cytochrome b5 15302..15976 Calditerrivibrio nitroreducens DSM 19672 10008010 YP_004050093.1 CDS Calni_0013 NC_014758.1 15964 16218 D InterPro IPR003251; KEGG: ddf:DEFDS_0850 hypothetical protein; PFAM: Rubrerythrin; SPTR: uncharacterized protein; PFAM: Rubrerythrin; rubrerythrin 15964..16218 Calditerrivibrio nitroreducens DSM 19672 10008011 YP_004050094.1 CDS Calni_0014 NC_014758.1 16268 17500 D InterPro IPR000767: IPR002078: IPR013247; KEGG: ddf:DEFDS_1249 hypothetical protein; PFAM: SH3 type 3 domain protein; SPTR: uncharacterized protein; PFAM: Archaeal ATPase; Bacterial SH3 domain; sh3 type 3 domain-containing protein 16268..17500 Calditerrivibrio nitroreducens DSM 19672 10008012 YP_004050095.1 CDS Calni_0015 NC_014758.1 17488 18180 D COGs: COG0566 rRNA methylase; InterPro IPR004441: IPR013123: IPR001537; KEGG: ddf:DEFDS_2175 RNA methyltransferase TrmH family; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: RNA methyltransferase, TrmH family; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 3; RNA methyltransferase, trmh family, group 3 17488..18180 Calditerrivibrio nitroreducens DSM 19672 10008013 YP_004050096.1 CDS Calni_0016 NC_014758.1 18244 18504 D KEGG: cgr:CAGL0J01774g hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 18244..18504 Calditerrivibrio nitroreducens DSM 19672 10008014 YP_004050097.1 CDS Calni_0017 NC_014758.1 18540 18992 D COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR000792: IPR014284: IPR013249; KEGG: dal:Dalk_3692 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma-24 subunit, ecf subfamily 18540..18992 Calditerrivibrio nitroreducens DSM 19672 10008015 YP_004050098.1 CDS Calni_0018 NC_014758.1 18989 19555 D InterPro IPR004193; KEGG: dat:HRM2_02180 hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb); PFAM: glycoside hydrolase family 13 domain protein; SPTR: Hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb); PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); glycoside hydrolase 18989..19555 Calditerrivibrio nitroreducens DSM 19672 10008016 YP_004050099.1 CDS Calni_0019 NC_014758.1 19557 19859 D KEGG: dap:Dacet_0979 glycoside hydrolase family 13 domain protein; SPTR: Glycoside hydrolase family 13 domain protein; hypothetical protein 19557..19859 Calditerrivibrio nitroreducens DSM 19672 10008017 YP_004050100.1 CDS Calni_0020 NC_014758.1 19904 20758 D KEGG: dal:Dalk_3689 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 19904..20758 Calditerrivibrio nitroreducens DSM 19672 10008018 YP_004050101.1 CDS Calni_0021 NC_014758.1 20881 22110 D COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR015077; KEGG: glo:Glov_1035 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1858); hypothetical protein 20881..22110 Calditerrivibrio nitroreducens DSM 19672 10008019 YP_004050102.1 CDS Calni_0022 NC_014758.1 22107 22790 D COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR012202: IPR003495; KEGG: dap:Dacet_2026 cobalamin synthesis protein P47K; PFAM: cobalamin synthesis protein P47K; SPTR: Cobalamin synthesis protein, P47K; PFAM: CobW/HypB/UreG, nucleotide-binding domain; cobalamin synthesis protein p47k 22107..22790 Calditerrivibrio nitroreducens DSM 19672 10008020 YP_004050103.1 CDS Calni_0023 NC_014758.1 22800 23795 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: glo:Glov_1037 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter 22800..23795 Calditerrivibrio nitroreducens DSM 19672 10008021 YP_004050104.1 CDS Calni_0024 NC_014758.1 23820 24059 D KEGG: ddf:DEFDS_1680 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 23820..24059 Calditerrivibrio nitroreducens DSM 19672 10008022 YP_004050105.1 CDS Calni_0025 NC_014758.1 24102 24419 D InterPro IPR020483; KEGG: ddf:DEFDS_1681 hypothetical protein; SPTR: uncharacterized protein; PFAM: Nitrous oxide-stimulated promoter; hypothetical protein 24102..24419 Calditerrivibrio nitroreducens DSM 19672 10008023 YP_004050106.1 CDS Calni_0026 NC_014758.1 24522 24725 D COGs: COG1278 Cold shock protein; InterPro IPR002059: IPR019844: IPR012156: IPR011129; KEGG: ddf:DEFDS_1433 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; PFAM: 'Cold-shock' DNA-binding domain; cold-shock protein 24522..24725 Calditerrivibrio nitroreducens DSM 19672 10008024 YP_004050107.1 CDS Calni_0027 NC_014758.1 24950 25153 D COGs: COG1278 Cold shock protein; InterPro IPR002059: IPR019844: IPR012156: IPR011129; KEGG: ddf:DEFDS_1433 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; PFAM: 'Cold-shock' DNA-binding domain; cold-shock protein 24950..25153 Calditerrivibrio nitroreducens DSM 19672 10008025 YP_004050108.1 CDS Calni_0028 NC_014758.1 25488 27020 D InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_0353 hypothetical protein; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 25488..27020 Calditerrivibrio nitroreducens DSM 19672 10008026 YP_004050109.1 CDS Calni_0030 NC_014758.1 27467 27688 R KEGG: ddf:DEFDS_1432 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2905); hypothetical protein complement(27467..27688) Calditerrivibrio nitroreducens DSM 19672 10008028 YP_004050110.1 CDS Calni_0031 NC_014758.1 27772 29196 D COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: dap:Dacet_1625 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 27772..29196 Calditerrivibrio nitroreducens DSM 19672 10008029 YP_004050111.1 CDS Calni_0032 NC_014758.1 29202 30269 D COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR017900: IPR017896; KEGG: ddf:DEFDS_0264 4Fe-4S ferredoxin; SPTR: 4Fe-4S ferredoxin; PFAM: Domain of unknown function (DUF362); 4Fe-4S ferredoxin 29202..30269 Calditerrivibrio nitroreducens DSM 19672 10008030 YP_004050112.1 CDS Calni_0033 NC_014758.1 30431 32353 R COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR009875; KEGG: ddf:DEFDS_0211 hypothetical protein; PFAM: type IV pilus assembly PilZ; SPTR: uncharacterized protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; PilZ domain; type IV pilus assembly pilz complement(30431..32353) Calditerrivibrio nitroreducens DSM 19672 10008031 YP_004050113.1 CDS Calni_0034 NC_014758.1 32515 32748 D KEGG: dap:Dacet_2960 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 32515..32748 Calditerrivibrio nitroreducens DSM 19672 10008032 YP_004050114.1 CDS Calni_0035 NC_014758.1 32751 33689 R COGs: COG2855 membrane protein; InterPro IPR004684: IPR018383; KEGG: ddf:DEFDS_1435 hypothetical protein; PFAM: Uncharacterised protein family UPF0324; SPTR: uncharacterized protein; manually curated; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein complement(32751..33689) Calditerrivibrio nitroreducens DSM 19672 10008033 YP_004050115.1 CDS Calni_0036 NC_014758.1 34272 35693 D COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: dap:Dacet_2046 NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NmrA family protein; PFAM: Protein of unknown function (DUF2867); 3-beta hydroxysteroid dehydrogenase/isomerase family; nad-dependent epimerase/dehydratase 34272..35693 Calditerrivibrio nitroreducens DSM 19672 10008034 YP_004050116.1 CDS Calni_0037 NC_014758.1 35680 37014 D COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR005101; KEGG: mmh:Mmah_0410 deoxyribodipyrimidine photo-lyase type II; PFAM: DNA photolyase FAD-binding; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photo-lyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: photolyase PhrII; deoxyribodipyrimidine photo-lyase 35680..37014 Calditerrivibrio nitroreducens DSM 19672 10008035 YP_004050117.1 CDS Calni_0038 NC_014758.1 37011 38045 D COGs: COG5621 secreted hydrolase; KEGG: ddf:DEFDS_1878 hypothetical protein; SPTR: uncharacterized protein; PFAM: Hydroxyneurosporene synthase (CrtC); hypothetical protein 37011..38045 Calditerrivibrio nitroreducens DSM 19672 10008036 YP_004050118.1 CDS Calni_0039 NC_014758.1 38073 38720 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: ddf:DEFDS_1877 ABC transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding subunit; PFAM: ABC transporter; ABC transporter 38073..38720 Calditerrivibrio nitroreducens DSM 19672 10008037 YP_004050119.1 CDS Calni_0040 NC_014758.1 38698 41211 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: ddf:DEFDS_1876 ABC transporter permease; PFAM: protein of unknown function DUF214; SPTR: ABC transporter, permease; PFAM: Predicted permease; hypothetical protein 38698..41211 Calditerrivibrio nitroreducens DSM 19672 10008038 YP_004050120.1 CDS Calni_0041 NC_014758.1 41222 42382 R COGs: COG1896 hydrolase of HD superfamily; KEGG: nth:Nther_2075 hydrolase (HAD superfamily); SPTR: Hydrolase (HAD superfamily); hydrolase (had superfamily) complement(41222..42382) Calditerrivibrio nitroreducens DSM 19672 10008039 YP_004050121.1 CDS Calni_0042 NC_014758.1 42382 42642 R KEGG: ddf:DEFDS_1344 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(42382..42642) Calditerrivibrio nitroreducens DSM 19672 10008040 YP_004050122.1 CDS Calni_0043 NC_014758.1 42639 43304 R COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: ddf:DEFDS_0315 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase complement(42639..43304) Calditerrivibrio nitroreducens DSM 19672 10008041 YP_004050123.1 CDS Calni_0044 NC_014758.1 43301 43546 R InterPro IPR005358; KEGG: ddf:DEFDS_0314 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: uncharacterized protein; manually curated; hypothetical protein complement(43301..43546) Calditerrivibrio nitroreducens DSM 19672 10008042 YP_004050124.1 CDS Calni_0045 NC_014758.1 43533 44288 R COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: ddf:DEFDS_0313 fumarylacetoacetate hydrolase family protein; PFAM: fumarylacetoacetate (FAA) hydrolase; PRIAM: Ureidoglycolate lyase; SPTR: Fumarylacetoacetate hydrolase family protein; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family; ureidoglycolate lyase complement(43533..44288) Calditerrivibrio nitroreducens DSM 19672 10008043 YP_004050125.1 CDS Calni_0046 NC_014758.1 44307 45305 R COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: ddf:DEFDS_1020 aminodeoxychorismate lyase; PFAM: aminodeoxychorismate lyase; SPTR: Aminodeoxychorismate lyase; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; aminodeoxychorismate lyase complement(44307..45305) Calditerrivibrio nitroreducens DSM 19672 10008044 YP_004050126.1 CDS Calni_0047 NC_014758.1 45307 46413 R COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR001317: IPR011702: IPR006220: IPR017926: IPR 006274: IPR002474: IPR000991; KEGG: ddf:DEFDS_1021 carbamoylphosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: Carbamoylphosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(45307..46413) Calditerrivibrio nitroreducens DSM 19672 10008045 YP_004050127.1 CDS Calni_0048 NC_014758.1 46522 47097 D COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: nis:NIS_0705 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: uncharacterized protein; PFAM: SNARE associated Golgi protein; hypothetical protein 46522..47097 Calditerrivibrio nitroreducens DSM 19672 10008046 YP_004050128.1 CDS Calni_0049 NC_014758.1 47083 47817 R InterPro IPR002781; KEGG: ddf:DEFDS_0184 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein complement(47083..47817) Calditerrivibrio nitroreducens DSM 19672 10008047 YP_004050129.1 CDS Calni_0050 NC_014758.1 47957 48802 D COGs: COG0777 acetyl-CoA carboxylase beta subunit; InterPro IPR000438: IPR011762: IPR000022; KEGG: ddf:DEFDS_0579 acetyl-CoA carboxylase carboxyl transferase subunit beta; PFAM: carboxyl transferase; SPTR: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 47957..48802 Calditerrivibrio nitroreducens DSM 19672 10008048 YP_004050130.1 CDS Calni_0051 NC_014758.1 48831 49949 D COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR018109: IPR001645: IPR013221; KEGG: dap:Dacet_1860 FolC bifunctional protein; PFAM: Mur ligase middle domain protein; SPTR: FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 48831..49949 Calditerrivibrio nitroreducens DSM 19672 10008049 YP_004050131.1 CDS Calni_0052 NC_014758.1 49942 52068 D COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR005653: IPR007543; KEGG: ddf:DEFDS_0577 organic solvent tolerance protein; PFAM: OstA family protein; Organic solvent tolerance protein; SPTR: Organic solvent tolerance protein; PFAM: OstA-like protein; osta family protein 49942..52068 Calditerrivibrio nitroreducens DSM 19672 10008050 YP_004050132.1 CDS Calni_0053 NC_014758.1 52068 53075 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: ddf:DEFDS_0576 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; nad-dependent epimerase/dehydratase 52068..53075 Calditerrivibrio nitroreducens DSM 19672 10008051 YP_004050133.1 CDS Calni_0054 NC_014758.1 53056 54057 D KEGG: ddf:DEFDS_0575 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 53056..54057 Calditerrivibrio nitroreducens DSM 19672 10008052 YP_004050134.1 CDS Calni_0055 NC_014758.1 54061 55053 D COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667; KEGG: dap:Dacet_1863 phosphoesterase RecJ domain protein; PFAM: phosphoesterase RecJ domain protein; SPTR: Phosphoesterase RecJ domain protein; PFAM: DHH family; phosphoesterase recj domain-containing protein 54061..55053 Calditerrivibrio nitroreducens DSM 19672 10008053 YP_004050135.1 CDS Calni_0056 NC_014758.1 55103 55264 D COGs: COG1773 Rubredoxin; InterPro IPR001052: IPR018527: IPR004039; KEGG: dde:Dde_3194 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; PFAM: Rubredoxin; rubredoxin-type fe(cys)4 protein 55103..55264 Calditerrivibrio nitroreducens DSM 19672 10008054 YP_004050136.1 CDS Calni_0057 NC_014758.1 55357 56568 D COGs: COG0426 flavoprotein; InterPro IPR008254: IPR016440; KEGG: ddf:DEFDS_0572 rubredoxin-oxygen oxidoreductase; PFAM: flavodoxin/nitric oxide synthase; SPTR: Rubredoxin-oxygen oxidoreductase; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin; flavodoxin/nitric oxide synthase 55357..56568 Calditerrivibrio nitroreducens DSM 19672 10008055 YP_004050137.1 CDS Calni_0058 NC_014758.1 56614 58236 D COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610: IPR001667: IPR003156; KEGG: csc:Csac_0860 single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease recj 56614..58236 Calditerrivibrio nitroreducens DSM 19672 10008056 YP_004050138.1 CDS Calni_0059 NC_014758.1 58233 58832 R COGs: COG2431 membrane protein; InterPro IPR005642; KEGG: ddf:DEFDS_1289 hypothetical protein; PFAM: protein of unknown function DUF340 membrane; SPTR: uncharacterized protein; PFAM: Membrane protein of unknown function (DUF340); hypothetical protein complement(58233..58832) Calditerrivibrio nitroreducens DSM 19672 10008057 YP_004050139.1 CDS Calni_0060 NC_014758.1 58829 59098 R KEGG: ddf:DEFDS_1290 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(58829..59098) Calditerrivibrio nitroreducens DSM 19672 10008058 YP_004050140.1 CDS Calni_0061 NC_014758.1 59100 60533 R COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362: IPR020557: IPR004769: IPR019468; KEGG: ddf:DEFDS_1224 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase complement(59100..60533) Calditerrivibrio nitroreducens DSM 19672 10008059 YP_004050141.1 CDS Calni_0062 NC_014758.1 60661 61752 D COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR017909: IPR006311: IPR019546: IPR018389; KEGG: ddf:DEFDS_0139 C4-dicarboxylate transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: C4-dicarboxylate transporter, substrate-binding protein; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Bacterial extracellular solute-binding protein, family 7; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; extracellular solute-binding protein 60661..61752 Calditerrivibrio nitroreducens DSM 19672 10008060 YP_004050142.1 CDS Calni_0063 NC_014758.1 61785 63095 R COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR004681: IPR010656; KEGG: dap:Dacet_2051 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; trap dicarboxylate transporter subunit DctM complement(61785..63095) Calditerrivibrio nitroreducens DSM 19672 10008061 YP_004050143.1 CDS Calni_0064 NC_014758.1 63105 63632 R COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: ddf:DEFDS_2070 C4-dicarboxylate transporter small subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: C4-dicarboxylate transporter, small subunit; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite ATP-independent periplasmic transporter dctq component complement(63105..63632) Calditerrivibrio nitroreducens DSM 19672 10008062 YP_004050144.1 CDS Calni_0065 NC_014758.1 63778 65421 R COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR000644: IPR004097; KEGG: dap:Dacet_2031 inorganic diphosphatase; PFAM: CBS domain containing protein; DHHA2 domain protein; PRIAM: Inorganic diphosphatase; SPTR: Inorganic diphosphatase; PFAM: DRTGG domain; DHH family; CBS domain; DHHA2 domain; inorganic diphosphatase complement(63778..65421) Calditerrivibrio nitroreducens DSM 19672 10008063 YP_004050145.1 CDS Calni_0066 NC_014758.1 65537 65866 D InterPro IPR002645; KEGG: tmt:Tmath_1165 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; sulfate transporter/antisigma-factor antagonist stas 65537..65866 Calditerrivibrio nitroreducens DSM 19672 10008064 YP_004050146.1 CDS Calni_0067 NC_014758.1 65863 66303 D COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: noc:Noc_2977 anti-sigma regulatory factor (Ser/Thr protein kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; anti-sigma regulatory factor, serine/threonine protein kinase 65863..66303 Calditerrivibrio nitroreducens DSM 19672 10008065 YP_004050147.1 CDS Calni_0068 NC_014758.1 66357 66797 R InterPro IPR017937: IPR017936: IPR000866; KEGG: ddf:DEFDS_1997 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: uncharacterized protein; PFAM: Redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen complement(66357..66797) Calditerrivibrio nitroreducens DSM 19672 10008066 YP_004050148.1 CDS Calni_0069 NC_014758.1 66856 67056 R InterPro IPR010035: IPR003749; KEGG: ddf:DEFDS_1998 thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; SPTR: Thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein this complement(66856..67056) Calditerrivibrio nitroreducens DSM 19672 10008067 YP_004050149.1 CDS Calni_0070 NC_014758.1 67053 67856 R COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR012729: IPR000594; KEGG: ddf:DEFDS_1999 thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: Thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: ThiF family; TIGRFAM: thiamine biosynthesis protein ThiF, family 2; thiamine biosynthesis protein thif complement(67053..67856) Calditerrivibrio nitroreducens DSM 19672 10008068 YP_004050150.1 CDS Calni_0071 NC_014758.1 67893 68753 R COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: ddf:DEFDS_1995 peptidase M48 family; PFAM: peptidase M48 Ste24p; SPTR: Peptidase, M48 family; PFAM: Peptidase family M48; heat shock protein complement(67893..68753) Calditerrivibrio nitroreducens DSM 19672 10008069 YP_004050151.1 CDS Calni_0072 NC_014758.1 68740 69522 R COGs: COG1852 conserved hypothetical protein; InterPro IPR002829; KEGG: gsu:GSU0131 hypothetical protein; PFAM: protein of unknown function DUF116; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF116; hypothetical protein complement(68740..69522) Calditerrivibrio nitroreducens DSM 19672 10008070 YP_004050152.1 CDS Calni_0073 NC_014758.1 69515 70438 R COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005794: IPR002376: IPR005793; KEGG: dap:Dacet_2748 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(69515..70438) Calditerrivibrio nitroreducens DSM 19672 10008071 YP_004050153.1 CDS Calni_0074 NC_014758.1 70449 71678 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838: IPR004839; KEGG: ddf:DEFDS_1993 aminotransferase I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase, I and II; PFAM: Aminotransferase class I and II; ll-diaminopimelate aminotransferase apoenzyme complement(70449..71678) Calditerrivibrio nitroreducens DSM 19672 10008072 YP_004050154.1 CDS Calni_0075 NC_014758.1 71954 73534 R COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158: IPR007197: IPR006638; KEGG: lil:LA_3994 Fe-S oxidoreductase-like protein; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Fe-S oxidoreductase-like protein; PFAM: Radical SAM superfamily; B12 binding domain; cobalamin b12-binding domain-containing protein complement(71954..73534) Calditerrivibrio nitroreducens DSM 19672 10008073 YP_004050155.1 CDS Calni_0076 NC_014758.1 73593 73895 R COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: dap:Dacet_0255 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: RNA-binding S4 domain protein; PFAM: S4 domain; RNA-binding s4 domain-containing protein complement(73593..73895) Calditerrivibrio nitroreducens DSM 19672 10008074 YP_004050156.1 CDS Calni_0077 NC_014758.1 73895 74791 R InterPro IPR000297: IPR015391; KEGG: ddf:DEFDS_0231 peptidyl-prolyl cis-trans isomerase SurA; PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase SurA; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; sura domain complement(73895..74791) Calditerrivibrio nitroreducens DSM 19672 10008075 YP_004050157.1 CDS Calni_0078 NC_014758.1 74751 75788 R InterPro IPR000297; KEGG: ddf:DEFDS_0230 hypothetical protein; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: uncharacterized protein; PFAM: PPIC-type PPIASE domain; ppic-type peptidyl-prolyl cis-trans isomerase complement(74751..75788) Calditerrivibrio nitroreducens DSM 19672 10008076 YP_004050158.1 CDS Calni_0079 NC_014758.1 75739 76344 R COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006054: IPR013520: IPR006055; KEGG: ddf:DEFDS_0125 hypothetical protein; PFAM: Exonuclease RNase T and DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: uncharacterized protein; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III subunit epsilon complement(75739..76344) Calditerrivibrio nitroreducens DSM 19672 10008077 YP_004050159.1 CDS Calni_0080 NC_014758.1 76351 77127 R COGs: COG0797 Lipoprotein; InterPro IPR012997: IPR005132: IPR007730; KEGG: ddf:DEFDS_2081 rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein; SPTR: Rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; rare lipoprotein a complement(76351..77127) Calditerrivibrio nitroreducens DSM 19672 10008078 YP_004050160.1 CDS Calni_0081 NC_014758.1 77084 78151 R COGs: COG2603 ATPase; InterPro IPR001763: IPR017582; KEGG: ddf:DEFDS_2080 rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase; tRNA 2-selenouridine synthase complement(77084..78151) Calditerrivibrio nitroreducens DSM 19672 10008079 YP_004050161.1 CDS Calni_0082 NC_014758.1 78242 78535 D COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: ddf:DEFDS_1950 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit c 78242..78535 Calditerrivibrio nitroreducens DSM 19672 10008080 YP_004050162.1 CDS Calni_0083 NC_014758.1 78545 79996 D COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR020556: IPR004412: IPR000120; KEGG: ddf:DEFDS_1951 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A; PFAM: Amidase; PRIAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a 78545..79996 Calditerrivibrio nitroreducens DSM 19672 10008081 YP_004050163.1 CDS Calni_0084 NC_014758.1 80038 80340 D KEGG: ddf:DEFDS_1952 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 80038..80340 Calditerrivibrio nitroreducens DSM 19672 10008082 YP_004050164.1 CDS Calni_0085 NC_014758.1 80390 81178 R KEGG: dap:Dacet_2124 type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Metalloenzyme superfamily; Type I phosphodiesterase / nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(80390..81178) Calditerrivibrio nitroreducens DSM 19672 10008083 YP_004050165.1 CDS Calni_0087 NC_014758.1 82593 82922 D InterPro IPR001845; KEGG: dap:Dacet_0740 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family; regulatory protein arsr 82593..82922 Calditerrivibrio nitroreducens DSM 19672 10008085 YP_004050166.1 CDS Calni_0088 NC_014758.1 82986 84056 D COGs: COG0077 Prephenate dehydratase; InterPro IPR018528: IPR002701: IPR001086: IPR008242: IPR 010957: IPR020822: IPR002912; KEGG: ddf:DEFDS_2102 bifunctional chorismate mutase/prephenate dehydratase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein; SPTR: Bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of gram positive AroA protein; chorismate mutase domain of proteobacterial P-protein, clade 2; chorismate mutase 82986..84056 Calditerrivibrio nitroreducens DSM 19672 10008086 YP_004050167.1 CDS Calni_0089 NC_014758.1 84053 85153 D COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR001917: IPR005861: IPR004839; KEGG: ddf:DEFDS_2101 histidinol-phosphate transaminase; PFAM: aminotransferase class I and II; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 84053..85153 Calditerrivibrio nitroreducens DSM 19672 10008087 YP_004050168.1 CDS Calni_0090 NC_014758.1 85158 86177 D COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268: IPR006218; KEGG: ddf:DEFDS_2100 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 85158..86177 Calditerrivibrio nitroreducens DSM 19672 10008088 YP_004050169.1 CDS Calni_0091 NC_014758.1 86174 87001 D COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: ddf:DEFDS_2099 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 86174..87001 Calditerrivibrio nitroreducens DSM 19672 10008089 YP_004050170.1 CDS Calni_0092 NC_014758.1 87001 88287 D COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR001986: IPR016228: IPR006264; KEGG: ddf:DEFDS_2098 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 87001..88287 Calditerrivibrio nitroreducens DSM 19672 10008090 YP_004050171.1 CDS Calni_0093 NC_014758.1 88280 88936 D COGs: COG0283 Cytidylate kinase; InterPro IPR018313: IPR003136: IPR011994; KEGG: ddf:DEFDS_2097 cytidylate kinase; PFAM: cytidylate kinase region; SPTR: Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 88280..88936 Calditerrivibrio nitroreducens DSM 19672 10008091 YP_004050172.1 CDS Calni_0094 NC_014758.1 88941 89789 D COGs: COG0761 Penicillin tolerance protein; InterPro IPR003451; KEGG: ddf:DEFDS_2096 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); hydroxymethylbutenyl pyrophosphate reductase 88941..89789 Calditerrivibrio nitroreducens DSM 19672 10008092 YP_004050173.1 CDS Calni_0095 NC_014758.1 89776 91494 D COGs: COG0539 Ribosomal protein S1; InterPro IPR000110: IPR003029; KEGG: ddf:DEFDS_2095 30S ribosomal protein S1; PFAM: RNA binding S1 domain protein; SPTR: 30S ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; RNA binding s1 domain-containing protein 89776..91494 Calditerrivibrio nitroreducens DSM 19672 10008093 YP_004050174.1 CDS Calni_0096 NC_014758.1 91643 92746 D COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821: IPR017909: IPR006311: IPR006137; KEGG: ddf:DEFDS_0077 Ni-Fe hydrogenase small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: Ni-Fe hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA); hydrogenase (nife) small subunit hyda 91643..92746 Calditerrivibrio nitroreducens DSM 19672 10008094 YP_004050175.1 CDS Calni_0097 NC_014758.1 92756 94468 D COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR018194: IPR001501; KEGG: ddf:DEFDS_0076 Ni-Fe hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: Ni-Fe hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase; nickel-dependent hydrogenase large subunit 92756..94468 Calditerrivibrio nitroreducens DSM 19672 10008095 YP_004050176.1 CDS Calni_0098 NC_014758.1 94479 95156 D COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR000516; KEGG: ddf:DEFDS_0075 Ni-Fe hydrogenase cytochrome b subunit; SPTR: Ni-Fe hydrogenase, cytochrome b subunit; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; ni/fe-hydrogenase, b-type cytochrome subunit 94479..95156 Calditerrivibrio nitroreducens DSM 19672 10008096 YP_004050177.1 CDS Calni_0099 NC_014758.1 95271 96893 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004090: IPR004089: IPR003660; KEGG: dap:Dacet_0889 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 95271..96893 Calditerrivibrio nitroreducens DSM 19672 10008097 YP_004050178.1 CDS Calni_0100 NC_014758.1 97000 98001 D COGs: COG0468 RecA/RadA recombinase; InterPro IPR001553: IPR020584: IPR020588: IPR020587: IPR 013765: IPR003593; KEGG: ddf:DEFDS_0038 DNA recombination protein RecA; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: Protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; reca protein 97000..98001 Calditerrivibrio nitroreducens DSM 19672 10008098 YP_004050179.1 CDS Calni_0101 NC_014758.1 98102 99202 D COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482: IPR006321; KEGG: ddf:DEFDS_0037 twitching motility protein PilT; PFAM: type II secretion system protein E; SPTR: Twitching motility protein PilT; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein 98102..99202 Calditerrivibrio nitroreducens DSM 19672 10008099 YP_004050180.1 CDS Calni_0102 NC_014758.1 99192 99632 D COGs: COG2137 conserved hypothetical protein; InterPro IPR003783; KEGG: dap:Dacet_2774 regulatory protein RecX; PFAM: regulatory protein RecX; SPTR: Regulatory protein RecX; PFAM: RecX family; regulatory protein recx 99192..99632 Calditerrivibrio nitroreducens DSM 19672 10008100 YP_004050181.1 CDS Calni_0103 NC_014758.1 99613 100059 D COGs: COG0359 Ribosomal protein L9; InterPro IPR020594: IPR020070: IPR020069; KEGG: ddf:DEFDS_0035 50S ribosomal protein L9; PFAM: Ribosomal protein L9-like; SPTR: 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 99613..100059 Calditerrivibrio nitroreducens DSM 19672 10008101 YP_004050182.1 CDS Calni_0104 NC_014758.1 100046 101377 D COGs: COG0305 Replicative DNA helicase; InterPro IPR007694: IPR007692: IPR007693; KEGG: ddf:DEFDS_0034 replicative DNA helicase DnaB; PFAM: DnaB domain protein helicase domain protein; SPTR: Replicative DNA helicase DnaB; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; primary replicative DNA helicase 100046..101377 Calditerrivibrio nitroreducens DSM 19672 10008102 YP_004050183.1 CDS Calni_0105 NC_014758.1 101489 102418 D COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; InterPro IPR004463; KEGG: ddf:DEFDS_0033 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-o-(3-hydroxymyristoyl) n-acetylglucosamine deacetylase 101489..102418 Calditerrivibrio nitroreducens DSM 19672 10008103 YP_004050184.1 CDS Calni_0106 NC_014758.1 102449 102895 R InterPro IPR009410: IPR011642; KEGG: ddf:DEFDS_2158 hypothetical protein; PFAM: nucleoside recognition domain protein; SPTR: uncharacterized protein; nucleoside recognition domain-containing protein complement(102449..102895) Calditerrivibrio nitroreducens DSM 19672 10008104 YP_004050185.1 CDS Calni_0107 NC_014758.1 102886 103305 R InterPro IPR011642; KEGG: ddf:DEFDS_2159 hypothetical protein; PFAM: nucleoside recognition domain protein; SPTR: uncharacterized protein; PFAM: Nucleoside recognition; nucleoside recognition domain-containing protein complement(102886..103305) Calditerrivibrio nitroreducens DSM 19672 10008105 YP_004050186.1 CDS Calni_0108 NC_014758.1 103307 104098 R COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399: IPR013749; KEGG: nde:NIDE1195 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase complement(103307..104098) Calditerrivibrio nitroreducens DSM 19672 10008106 YP_004050187.1 CDS Calni_0109 NC_014758.1 104132 107596 R COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR004805: IPR004013: IPR011708: IPR004365: IPR 003141; KEGG: ddf:DEFDS_2002 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: phosphoesterase PHP domain protein; SPTR: DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha complement(104132..107596) Calditerrivibrio nitroreducens DSM 19672 10008107 YP_004050188.1 CDS Calni_0110 NC_014758.1 107603 108256 R COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: ddf:DEFDS_2001 molybdopterin-guanine dinucleotide biosynthesis protein B; SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein b complement(107603..108256) Calditerrivibrio nitroreducens DSM 19672 10008108 YP_004050189.1 CDS Calni_0111 NC_014758.1 108454 109671 D COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: swo:Swol_0155 hypothetical protein; PFAM: transposase mutator type; SPTR: uncharacterized protein; PFAM: Transposase, Mutator family; transposase mutator type 108454..109671 Calditerrivibrio nitroreducens DSM 19672 10008109 YP_004050190.1 CDS Calni_0113 NC_014758.1 109950 110684 R COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: ddf:DEFDS_0172 cytochrome c-type biogenesis protein; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome c-type biogenesis protein; PFAM: Cytochrome C biogenesis protein transmembrane region; cytochrome c biogenesis protein transmembrane region complement(109950..110684) Calditerrivibrio nitroreducens DSM 19672 10008111 YP_004050191.1 CDS Calni_0114 NC_014758.1 110792 110953 D hypothetical protein 110792..110953 Calditerrivibrio nitroreducens DSM 19672 10008112 YP_004050192.1 CDS Calni_0115 NC_014758.1 110964 111653 R InterPro IPR001173; KEGG: dap:Dacet_1396 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(110964..111653) Calditerrivibrio nitroreducens DSM 19672 10008113 YP_004050193.1 CDS Calni_0116 NC_014758.1 111650 112324 R COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: dap:Dacet_1397 SNARE associated Golgi protein-related protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-related protein; PFAM: SNARE associated Golgi protein; hypothetical protein complement(111650..112324) Calditerrivibrio nitroreducens DSM 19672 10008114 YP_004050194.1 CDS Calni_0117 NC_014758.1 112324 113004 R COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: fbc:FB2170_08399 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: uncharacterized protein; manually curated; PFAM: Uncharacterized protein conserved in bacteria (DUF2064); hypothetical protein complement(112324..113004) Calditerrivibrio nitroreducens DSM 19672 10008115 YP_004050195.1 CDS Calni_0118 NC_014758.1 112991 113992 R COGs: COG0502 Biotin synthase; KEGG: dap:Dacet_1024 radical SAM domain protein; SPTR: Radical SAM domain protein; radical SAM domain-containing protein complement(112991..113992) Calditerrivibrio nitroreducens DSM 19672 10008116 YP_004050196.1 CDS Calni_0119 NC_014758.1 113994 114446 R InterPro IPR010181; KEGG: dap:Dacet_1415 C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein; SPTR: C_GCAxxG_C_C family protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein; c_gcaxxg_c_c family protein complement(113994..114446) Calditerrivibrio nitroreducens DSM 19672 10008117 YP_004050197.1 CDS Calni_0120 NC_014758.1 114424 114846 R InterPro IPR001763; KEGG: dat:HRM2_39110 ThiF; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: ThiF; PFAM: Rhodanese-like domain; rhodanese domain-containing protein complement(114424..114846) Calditerrivibrio nitroreducens DSM 19672 10008118 YP_004050198.1 CDS Calni_0121 NC_014758.1 114950 115816 R COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: tye:THEYE_A0898 transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: Transcriptional regulator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; LysR family transcriptional regulator transcriptional regulator complement(114950..115816) Calditerrivibrio nitroreducens DSM 19672 10008119 YP_004050199.1 CDS Calni_0122 NC_014758.1 115825 116514 R COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: tle:Tlet_1353 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter complement(115825..116514) Calditerrivibrio nitroreducens DSM 19672 10008120 YP_004050200.1 CDS Calni_0123 NC_014758.1 116502 117227 R COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: clj:CLJU_c08790 nitrate/sulfonate/bicarbonate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Predicted ABC nitrate/sulfonate/bicarbonate family transporter, permease component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(116502..117227) Calditerrivibrio nitroreducens DSM 19672 10008121 YP_004050201.1 CDS Calni_0124 NC_014758.1 117224 118030 R COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: str:Sterm_2281 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; SPTR: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; hypothetical protein complement(117224..118030) Calditerrivibrio nitroreducens DSM 19672 10008122 YP_004050202.1 CDS Calni_0125 NC_014758.1 118041 119861 R COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: ppd:Ppro_3385 polysaccharide biosynthesis protein CapD; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Polysaccharide biosynthesis protein CapD; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein capd complement(118041..119861) Calditerrivibrio nitroreducens DSM 19672 10008123 YP_004050203.1 CDS Calni_0126 NC_014758.1 119865 121874 R COGs: COG1287 membrane protein required for N-linked glycosylation; InterPro IPR003674; KEGG: ddf:DEFDS_0397 hypothetical protein; PFAM: Oligosaccharyl transferase STT3 subunit; SPTR: uncharacterized protein; PFAM: Oligosaccharyl transferase STT3 subunit; oligosaccharyl transferase stt3 subunit complement(119865..121874) Calditerrivibrio nitroreducens DSM 19672 10008124 YP_004050204.1 CDS Calni_0127 NC_014758.1 121884 123881 R InterPro IPR003674; KEGG: ddf:DEFDS_0397 hypothetical protein; PFAM: Oligosaccharyl transferase STT3 subunit; SPTR: uncharacterized protein; oligosaccharyl transferase stt3 subunit complement(121884..123881) Calditerrivibrio nitroreducens DSM 19672 10008125 YP_004050205.1 CDS Calni_0128 NC_014758.1 123886 124491 R COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: saf:SULAZ_0356 sugar transferase; PFAM: sugar transferase; SPTR: Sugar transferase; PFAM: Bacterial sugar transferase; sugar transferase complement(123886..124491) Calditerrivibrio nitroreducens DSM 19672 10008126 YP_004050206.1 CDS Calni_0129 NC_014758.1 124494 125360 R COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterPro IPR016166: IPR003170: IPR006094: IPR011601; KEGG: dap:Dacet_0478 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(124494..125360) Calditerrivibrio nitroreducens DSM 19672 10008127 YP_004050207.1 CDS Calni_0130 NC_014758.1 125344 126126 R COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845; KEGG: ddf:DEFDS_0474 S-methyl-5-thioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: S-methyl-5-thioadenosine phosphorylase; PFAM: Phosphorylase superfamily; purine or other phosphorylase family 1 complement(125344..126126) Calditerrivibrio nitroreducens DSM 19672 10008128 YP_004050208.1 CDS Calni_0131 NC_014758.1 126155 126760 R COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: ddf:DEFDS_0473 hypothetical protein; PFAM: Uncharacterised protein family UPF0126; SPTR: uncharacterized protein; PFAM: UPF0126 domain; hypothetical protein complement(126155..126760) Calditerrivibrio nitroreducens DSM 19672 10008129 YP_004050209.1 CDS Calni_0132 NC_014758.1 126757 127410 R COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871: IPR010916: IPR003439: IPR015854: IPR 003593; KEGG: dap:Dacet_0476 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; ABC transporter complement(126757..127410) Calditerrivibrio nitroreducens DSM 19672 10008130 YP_004050210.1 CDS Calni_0133 NC_014758.1 127410 128639 R COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: ddf:DEFDS_0471 lipoprotein-releasing system permease protein; PFAM: protein of unknown function DUF214; SPTR: Lipoprotein-releasing system permease protein; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; hypothetical protein complement(127410..128639) Calditerrivibrio nitroreducens DSM 19672 10008131 YP_004050211.1 CDS Calni_0134 NC_014758.1 128647 130197 R COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterPro IPR011702: IPR006220: IPR001317: IPR017926: IPR 004739: IPR001674: IPR000991; KEGG: ddf:DEFDS_0470 GMP synthase glutamine-hydrolyzing; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; SPTR: GMP synthase, glutamine-hydrolyzing; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; gmp synthase (glutamine-hydrolyzing) complement(128647..130197) Calditerrivibrio nitroreducens DSM 19672 10008132 YP_004050212.1 CDS Calni_0135 NC_014758.1 130207 131670 R COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR015875: IPR000644: IPR018529: IPR005990: IPR 001093; KEGG: ddf:DEFDS_0469 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; inosine-5'-monophosphate dehydrogenase complement(130207..131670) Calditerrivibrio nitroreducens DSM 19672 10008133 YP_004050213.1 CDS Calni_0136 NC_014758.1 131793 132605 R COGs: COG0171 NAD synthase; InterPro IPR003694; KEGG: ddf:DEFDS_0468 NAD(+) synthase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; nh(3)-dependent nad(+) synthetase complement(131793..132605) Calditerrivibrio nitroreducens DSM 19672 10008134 YP_004050214.1 CDS Calni_0137 NC_014758.1 132602 133438 R COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: ddf:DEFDS_0467 hydrolase carbon-nitrogen family; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Hydrolase, carbon-nitrogen family; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase complement(132602..133438) Calditerrivibrio nitroreducens DSM 19672 10008135 YP_004050215.1 CDS Calni_0138 NC_014758.1 133435 133914 R COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: ddf:DEFDS_0466 molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC; SPTR: Molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; GTP cyclohydrolase subunit moac complement(133435..133914) Calditerrivibrio nitroreducens DSM 19672 10008136 YP_004050216.1 CDS Calni_0139 NC_014758.1 133930 135021 R COGs: COG0012 GTPase probable translation factor; InterPro IPR006073: IPR004396: IPR002917: IPR013029; KEGG: ddf:DEFDS_0464 GTP-binding protein; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; SPTR: GTP-binding protein; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein ychf complement(133930..135021) Calditerrivibrio nitroreducens DSM 19672 10008137 YP_004050217.1 CDS Calni_0140 NC_014758.1 135297 135452 D KEGG: mbr:MONBRDRAFT_6677 hypothetical protein; SPTR: Predicted protein; hypothetical protein 135297..135452 Calditerrivibrio nitroreducens DSM 19672 10008138 YP_004050218.1 CDS Calni_0141 NC_014758.1 135483 136817 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR005467: IPR003660: IPR003661: IPR 003594; KEGG: tye:THEYE_A0751 sensor histidine kinase, putative; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Sensor histidine kinase, putative; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(135483..136817) Calditerrivibrio nitroreducens DSM 19672 10008139 YP_004050219.1 CDS Calni_0142 NC_014758.1 136814 137482 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR005829: IPR001789: IPR001867; KEGG: tye:THEYE_A0752 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: DNA-binding response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(136814..137482) Calditerrivibrio nitroreducens DSM 19672 10008140 YP_004050220.1 CDS Calni_0143 NC_014758.1 137551 137922 R InterPro IPR005075; KEGG: tye:THEYE_A0756 peptidase propeptide and ypeb domain protein; PFAM: Propeptide PepSY amd peptidase M4; SPTR: Peptidase propeptide and ypeb domain protein; PFAM: Peptidase propeptide and YPEB domain; propeptide pepsy amd peptidase m4 complement(137551..137922) Calditerrivibrio nitroreducens DSM 19672 10008141 YP_004050221.1 CDS Calni_0145 NC_014758.1 138541 139569 D COGs: COG2865 transcriptional regulator protein; InterPro IPR010916; KEGG: cob:COB47_0800 transcriptional regulator; SPTR: transcriptional regulator; transcriptional regulator 138541..139569 Calditerrivibrio nitroreducens DSM 19672 10008143 YP_004050222.1 CDS Calni_0146 NC_014758.1 140041 141354 D InterPro IPR002559; KEGG: sso:SSO1775 transposase ISC1359; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4 family protein; PFAM: Transposase DDE domain; transposase is4 family protein 140041..141354 Calditerrivibrio nitroreducens DSM 19672 10008144 YP_004050223.1 CDS Calni_0147 NC_014758.1 141344 143311 D COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR020575: IPR019805: IPR001404: IPR003594: IPR 020576; KEGG: dap:Dacet_0900 heat shock protein HSP90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Chaperone protein htpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; heat shock protein hsp90 141344..143311 Calditerrivibrio nitroreducens DSM 19672 10008145 YP_004050224.1 CDS Calni_0148 NC_014758.1 143704 145269 D InterPro IPR011935; KEGG: pae:PA1494 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: conserved hypothetical protein; hypothetical protein 143704..145269 Calditerrivibrio nitroreducens DSM 19672 10008147 YP_004050225.1 CDS Calni_0149 NC_014758.1 145485 145865 D COGs: COG4968 Tfp pilus assembly protein PilE; InterPro IPR000983: IPR001120: IPR012902; KEGG: ddf:DEFDS_1270 hypothetical protein; SPTR: uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 145485..145865 Calditerrivibrio nitroreducens DSM 19672 10008148 YP_004050226.1 CDS Calni_0150 NC_014758.1 145859 147745 D KEGG: tye:THEYE_A0414 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2723); hypothetical protein 145859..147745 Calditerrivibrio nitroreducens DSM 19672 10008149 YP_004050227.1 CDS Calni_0151 NC_014758.1 147748 148374 D KEGG: tye:THEYE_A0413 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 147748..148374 Calditerrivibrio nitroreducens DSM 19672 10008150 YP_004050228.1 CDS Calni_0152 NC_014758.1 148376 149413 D COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: tye:THEYE_A0412 ADP-heptose:LPS heptosyltransferase II, putative; PFAM: glycosyl transferase family 9; SPTR: ADP-heptose:LPS heptosyltransferase II, putative; PFAM: Glycosyltransferase family 9 (heptosyltransferase); glycosyl transferase family protein 148376..149413 Calditerrivibrio nitroreducens DSM 19672 10008151 YP_004050229.1 CDS Calni_0153 NC_014758.1 149410 150117 D COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: saf:SULAZ_1001 dolichol-phosphate mannosyltransferase (dolichol-phosphate mannose synthase) (dolichyl-phosphate beta-D-mannosyltransferase) (mannose-P-dolichol synthase) (MPD synthase) (DPMsynthase); PFAM: glycosyl transferase family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Dolichol-phosphate mannosyltransferase (Dolichol-phosphate mannose synthase) (Dolichyl-phosphate beta-D-mannosyltransferase) (Mannose-P-dolichol synthase) (MPD synthase) (DPMsynthase); PFAM: Glycosyl transferase family 2; dolichyl-phosphate beta-d-mannosyltransferase 149410..150117 Calditerrivibrio nitroreducens DSM 19672 10008152 YP_004050230.1 CDS Calni_0154 NC_014758.1 150143 150241 D hypothetical protein 150143..150241 Calditerrivibrio nitroreducens DSM 19672 10008153 YP_004050231.1 CDS Calni_0155 NC_014758.1 150234 151418 D InterPro IPR002797; KEGG: tye:THEYE_A0578 hypothetical protein; PFAM: polysaccharide biosynthesis protein; SPTR: uncharacterized protein; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 150234..151418 Calditerrivibrio nitroreducens DSM 19672 10008154 YP_004050232.1 CDS Calni_0156 NC_014758.1 151463 152539 R COGs: COG0438 Glycosyltransferase; InterPro IPR018120: IPR001296; KEGG: saf:SULAZ_0998 glycosyl transferase, group 1 family; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(151463..152539) Calditerrivibrio nitroreducens DSM 19672 10008155 YP_004050233.1 CDS Calni_0157 NC_014758.1 152536 153471 R COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: saf:SULAZ_0999 glycosyl transferase, family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(152536..153471) Calditerrivibrio nitroreducens DSM 19672 10008156 YP_004050234.1 CDS Calni_0158 NC_014758.1 153464 153706 R KEGG: saf:SULAZ_1000 methyltransferase domain family protein; SPTR: Methyltransferase domain family protein; hypothetical protein complement(153464..153706) Calditerrivibrio nitroreducens DSM 19672 10008157 YP_004050235.1 CDS Calni_0159 NC_014758.1 154009 154308 D KEGG: pfh:PFHG_02879 conserved hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 154009..154308 Calditerrivibrio nitroreducens DSM 19672 10008158 YP_004050236.1 CDS Calni_0160 NC_014758.1 154320 157844 D COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; InterPro IPR018247: IPR002035; KEGG: pmx:PERMA_1154 hypothetical protein; PFAM: von Willebrand factor type A; SPTR: uncharacterized protein; PFAM: von Willebrand factor type A domain; von willebrand factor type a 154320..157844 Calditerrivibrio nitroreducens DSM 19672 10008159 YP_004050237.1 CDS Calni_0161 NC_014758.1 157841 158293 D InterPro IPR001120: IPR012902; KEGG: ddf:DEFDS_0861 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 157841..158293 Calditerrivibrio nitroreducens DSM 19672 10008160 YP_004050238.1 CDS Calni_0162 NC_014758.1 158280 158714 D KEGG: ddf:DEFDS_0860 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 158280..158714 Calditerrivibrio nitroreducens DSM 19672 10008161 YP_004050239.1 CDS Calni_0163 NC_014758.1 158711 159673 D InterPro IPR001120: IPR012902; KEGG: ddf:DEFDS_0859 hypothetical protein; SPTR: uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 158711..159673 Calditerrivibrio nitroreducens DSM 19672 10008162 YP_004050240.1 CDS Calni_0164 NC_014758.1 159666 160094 D KEGG: ddf:DEFDS_0858 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 159666..160094 Calditerrivibrio nitroreducens DSM 19672 10008163 YP_004050241.1 CDS Calni_0165 NC_014758.1 160123 160581 D InterPro IPR001120: IPR012902; KEGG: dps:DP1468 fimbrial biogenesis protein FimU; SPTR: uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 160123..160581 Calditerrivibrio nitroreducens DSM 19672 10008164 YP_004050242.1 CDS Calni_0166 NC_014758.1 160574 161581 R COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886: IPR001509; KEGG: saf:SULAZ_0910 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-galactose 4-epimerase complement(160574..161581) Calditerrivibrio nitroreducens DSM 19672 10008165 YP_004050243.1 CDS Calni_0167 NC_014758.1 161715 163436 D COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR017871: IPR003439: IPR017940: IPR011917: IPR 001140: IPR003593; KEGG: ddf:DEFDS_0328 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: lipid A export permease/ATP-binding protein MsbA; lipid a ABC transporter ATPase/inner membrane protein 161715..163436 Calditerrivibrio nitroreducens DSM 19672 10008166 YP_004050244.1 CDS Calni_0168 NC_014758.1 163524 165350 D COGs: COG1217 membrane GTPase involved in stress response; InterPro IPR000795: IPR005225: IPR006298: IPR004161: IPR 000640; KEGG: dvm:DvMF_0822 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein typa 163524..165350 Calditerrivibrio nitroreducens DSM 19672 10008167 YP_004050245.1 CDS Calni_0169 NC_014758.1 165453 167957 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR005467: IPR001789: IPR000700: IPR 000014: IPR001638: IPR013656: IPR003661: IPR003594: IPR001610; KEGG: dba:Dbac_2309 PAS/PAC sensor hybrid histidine kinase; PFAM: extracellular solute-binding protein family 3; PAS fold-4 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; SMART: extracellular solute-binding protein family 3; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 165453..167957 Calditerrivibrio nitroreducens DSM 19672 10008168 YP_004050246.1 CDS Calni_0170 NC_014758.1 168328 169434 D InterPro IPR017932; KEGG: ddf:DEFDS_2138 hypothetical protein; SPTR: uncharacterized protein; PFAM: Glutamine amidotransferases class-II; glutamate synthase (nadph) gltb1 subunit 168328..169434 Calditerrivibrio nitroreducens DSM 19672 10008169 YP_004050247.1 CDS Calni_0171 NC_014758.1 169422 171065 D COGs: COG0069 Glutamate synthase domain 2; InterPro IPR017900: IPR017896: IPR002932; KEGG: ddf:DEFDS_2137 ferredoxin-dependent glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; SPTR: Ferredoxin-dependent glutamate synthase, alpha subunit; PFAM: Conserved region in glutamate synthase; ferredoxin-dependent glutamate synthase 169422..171065 Calditerrivibrio nitroreducens DSM 19672 10008170 YP_004050248.1 CDS Calni_0172 NC_014758.1 171076 173406 D COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027: IPR017900: IPR017896: IPR002489; KEGG: ddf:DEFDS_2136 ferredoxin-dependent glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase alpha subunit domain protein; SPTR: Ferredoxin-dependent glutamate synthase, beta subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; GXGXG motif; glutamate synthase (nadph) gltb3 subunit 171076..173406 Calditerrivibrio nitroreducens DSM 19672 10008171 YP_004050249.1 CDS Calni_0173 NC_014758.1 173446 174732 R COGs: COG0004 Ammonia permease; InterPro IPR018047: IPR001905; KEGG: ddf:DEFDS_0082 ammonium transporter Amt family; PFAM: ammonium transporter; SPTR: Ammonium transporter, Amt family; TIGRFAM: ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11; ammonium transporter complement(173446..174732) Calditerrivibrio nitroreducens DSM 19672 10008172 YP_004050250.1 CDS Calni_0174 NC_014758.1 174919 175263 R InterPro IPR001845; KEGG: ddf:DEFDS_1673 AsrR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, AsrR family; PFAM: Bacterial regulatory protein, arsR family; regulatory protein arsr complement(174919..175263) Calditerrivibrio nitroreducens DSM 19672 10008173 YP_004050251.1 CDS Calni_0175 NC_014758.1 175362 176534 D COGs: COG0701 permease; InterPro IPR001991: IPR005524; KEGG: dap:Dacet_2259 permease; PFAM: permease; SPTR: Permease; PFAM: Predicted permease; permease 175362..176534 Calditerrivibrio nitroreducens DSM 19672 10008174 YP_004050252.1 CDS Calni_0176 NC_014758.1 176549 177526 D COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: tko:TK2009 cobalt/zinc/cadmium cation efflux pump protein; PFAM: cation efflux protein; SPTR: Cobalt/zinc/cadmium cation efflux pump protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 176549..177526 Calditerrivibrio nitroreducens DSM 19672 10008175 YP_004050253.1 CDS Calni_0177 NC_014758.1 177530 177775 D InterPro IPR005243; KEGG: ddf:DEFDS_1671 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2; redox-active disulfide protein 2 177530..177775 Calditerrivibrio nitroreducens DSM 19672 10008176 YP_004050254.1 CDS Calni_0178 NC_014758.1 177792 177923 D hypothetical protein 177792..177923 Calditerrivibrio nitroreducens DSM 19672 10008177 YP_004050255.1 CDS Calni_0179 NC_014758.1 178078 178512 D COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: ddf:DEFDS_1452 arsenate reductase (glutaredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight; PRIAM: Protein-tyrosine-phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Arsenate reductase (Glutaredoxin); PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); protein tyrosine phosphatase 178078..178512 Calditerrivibrio nitroreducens DSM 19672 10008178 YP_004050256.1 CDS Calni_0180 NC_014758.1 178502 179575 D COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706: IPR002657; KEGG: nde:NIDE3708 arsenite resistance protein ArsB; PFAM: Bile acid:sodium symporter; SPTR: Arsenite resistance protein ArsB; TIGRFAM: arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein 178502..179575 Calditerrivibrio nitroreducens DSM 19672 10008179 YP_004050257.1 CDS Calni_0181 NC_014758.1 179878 180807 D COGs: COG0679 permease; InterPro IPR004776; KEGG: dap:Dacet_0517 auxin efflux carrier; PFAM: Auxin Efflux Carrier; SPTR: Auxin Efflux Carrier; PFAM: Membrane transport protein; auxin efflux carrier 179878..180807 Calditerrivibrio nitroreducens DSM 19672 10008180 YP_004050258.1 CDS Calni_0182 NC_014758.1 181302 182270 D COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: ddf:DEFDS_0812 porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase 181302..182270 Calditerrivibrio nitroreducens DSM 19672 10008181 YP_004050259.1 CDS Calni_0183 NC_014758.1 182270 182995 D COGs: COG2607 ATPase (AAA+ superfamily); InterPro IPR008533; KEGG: ddf:DEFDS_0813 hypothetical protein; PFAM: protein of unknown function DUF815; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF815); hypothetical protein 182270..182995 Calditerrivibrio nitroreducens DSM 19672 10008182 YP_004050260.1 CDS Calni_0184 NC_014758.1 182992 184221 R COGs: COG3434 signal transduction protein containing EAL and modified HD-GYP domains; InterPro IPR001633: IPR014408: IPR013976; KEGG: ddf:DEFDS_0835 signal transduction response regulator; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein; SPTR: Signal transduction response regulator; PFAM: EAL domain; HDOD domain; diguanylate phosphodiesterase metal dependent hydrolase domain complement(182992..184221) Calditerrivibrio nitroreducens DSM 19672 10008183 YP_004050261.1 CDS Calni_0185 NC_014758.1 184521 186848 D COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006655: IPR017909: IPR006311: IPR006963: IPR 006656: IPR006657; KEGG: ddf:DEFDS_1699 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; molybdopterin oxidoreductase 184521..186848 Calditerrivibrio nitroreducens DSM 19672 10008184 YP_004050262.1 CDS Calni_0186 NC_014758.1 186861 187418 D COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017900: IPR017896; KEGG: ddf:DEFDS_1692 molybdopterin oxidoreductase 4Fe-4S ferredoxin; SPTR: Molybdopterin oxidoreductase, 4Fe-4S ferredoxin; PFAM: 4Fe-4S binding domain; molybdopterin oxidoreductase 4fe-4S ferredoxin 186861..187418 Calditerrivibrio nitroreducens DSM 19672 10008185 YP_004050263.1 CDS Calni_0187 NC_014758.1 187428 188633 D COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: ddf:DEFDS_1691 molybdopterin oxidoreductase membrane subunit; PFAM: Polysulphide reductase NrfD; SPTR: Molybdopterin oxidoreductase, membrane subunit; PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD 187428..188633 Calditerrivibrio nitroreducens DSM 19672 10008186 YP_004050264.1 CDS Calni_0188 NC_014758.1 188682 189029 R COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645: IPR003658; KEGG: ddf:DEFDS_0079 anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma-factor antagonist complement(188682..189029) Calditerrivibrio nitroreducens DSM 19672 10008187 YP_004050265.1 CDS Calni_0189 NC_014758.1 189179 190639 D COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR003010: IPR004563; KEGG: ddf:DEFDS_0986 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein n-acyltransferase 189179..190639 Calditerrivibrio nitroreducens DSM 19672 10008188 YP_004050266.1 CDS Calni_0190 NC_014758.1 190642 190887 D KEGG: ddf:DEFDS_0580 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 190642..190887 Calditerrivibrio nitroreducens DSM 19672 10008189 YP_004050267.1 CDS Calni_0191 NC_014758.1 191210 193081 D InterPro IPR000297; KEGG: ddf:DEFDS_1056 peptidyl-prolyl cis-trans isomerse D; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Peptidyl-prolyl cis-trans isomerse D; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; ppic-type peptidyl-prolyl cis-trans isomerase 191210..193081 Calditerrivibrio nitroreducens DSM 19672 10008192 YP_004050268.1 CDS Calni_0192 NC_014758.1 193288 194274 D COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: ddf:DEFDS_0187 ABC transporter substrate-binding protein; PFAM: protein of unknown function DUF534; SPTR: ABC transporter, substrate-binding protein; PFAM: ABC transporter substrate binding protein; hypothetical protein 193288..194274 Calditerrivibrio nitroreducens DSM 19672 10008193 YP_004050269.1 CDS Calni_0193 NC_014758.1 194271 196748 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR016160: IPR005467: IPR001789: IPR 000014: IPR013656: IPR003594; KEGG: ppd:Ppro_3008 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; response regulator receiver; SPTR: Signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; pas/pac sensor hybrid histidine kinase 194271..196748 Calditerrivibrio nitroreducens DSM 19672 10008194 YP_004050270.1 CDS Calni_0194 NC_014758.1 196750 197298 D InterPro IPR000868; KEGG: ddf:DEFDS_0678 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family; isochorismatase hydrolase 196750..197298 Calditerrivibrio nitroreducens DSM 19672 10008195 YP_004050271.1 CDS Calni_0195 NC_014758.1 197291 197773 D COGs: COG3091 conserved hypothetical protein; InterPro IPR006640; KEGG: asu:Asuc_0837 hypothetical protein; SMART: protein of unknown function SprT; SPTR: Protein sprT; PFAM: SprT-like family; hypothetical protein 197291..197773 Calditerrivibrio nitroreducens DSM 19672 10008196 YP_004050272.1 CDS Calni_0196 NC_014758.1 197819 198679 D KEGG: dap:Dacet_2885 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 197819..198679 Calditerrivibrio nitroreducens DSM 19672 10008197 YP_004050273.1 CDS Calni_0197 NC_014758.1 198709 199512 D COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR005770; KEGG: drt:Dret_0095 phosphonate ABC transporter, periplasmic phosphonate-binding protein; SPTR: Phosphonates-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; phosphonate ABC transporter substrate-binding protein 198709..199512 Calditerrivibrio nitroreducens DSM 19672 10008198 YP_004050274.1 CDS Calni_0198 NC_014758.1 199651 200757 D COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: ddf:DEFDS_P121 transposase; PFAM: transposase mutator type; SPTR: Transposase; PFAM: Transposase, Mutator family; transposase mutator type 199651..200757 Calditerrivibrio nitroreducens DSM 19672 10008199 YP_004050275.1 CDS Calni_0199 NC_014758.1 200962 202980 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR006162: IPR005467: IPR001789: IPR 003661: IPR003594; KEGG: ssm:Spirs_1419 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; histidine kinase 200962..202980 Calditerrivibrio nitroreducens DSM 19672 10008200 YP_004050276.1 CDS Calni_0200 NC_014758.1 203003 203785 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: hch:HCH_00126 short-chain alcohol dehydrogenase-like protein; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain alcohol dehydrogenase-like protein; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr complement(203003..203785) Calditerrivibrio nitroreducens DSM 19672 10008201 YP_004050277.1 CDS Calni_0201 NC_014758.1 203769 205097 R COGs: COG1893 Ketopantoate reductase; InterPro IPR020476: IPR020084: IPR003710: IPR013332: IPR 013752: IPR000086; KEGG: ddf:DEFDS_2126 hypothetical protein; PFAM: Ketopantoate reductase ApbA/PanE domain protein; NUDIX hydrolase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase PanE/ApbA; NUDIX domain; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase complement(203769..205097) Calditerrivibrio nitroreducens DSM 19672 10008202 YP_004050278.1 CDS Calni_0202 NC_014758.1 205111 207507 R COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR001270: IPR018368: IPR004176: IPR003959: IPR 013093: IPR019489: IPR003593; KEGG: ddf:DEFDS_2127 ATP-dependent Clp protease ATP-binding subunit ClpC; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); ATPase complement(205111..207507) Calditerrivibrio nitroreducens DSM 19672 10008203 YP_004050279.1 CDS Calni_0203 NC_014758.1 207620 208843 D COGs: COG2206 HD-GYP domain; InterPro IPR006674: IPR003607; KEGG: ddf:DEFDS_2128 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; PFAM: Domain of unknown function (DUF3391); HD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 207620..208843 Calditerrivibrio nitroreducens DSM 19672 10008204 YP_004050280.1 CDS Calni_0204 NC_014758.1 208836 209363 D COGs: COG2716 Glycine cleavage system regulatory protein; InterPro IPR002912; KEGG: ddf:DEFDS_2129 glycine cleavage system transcriptional repressor; PFAM: amino acid-binding ACT domain protein; SPTR: Glycine cleavage system transcriptional repressor; PFAM: ACT domain; amino acid-binding act domain-containing protein 208836..209363 Calditerrivibrio nitroreducens DSM 19672 10008205 YP_004050281.1 CDS Calni_0205 NC_014758.1 209365 209871 D COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: ddf:DEFDS_2130 polypeptide deformylase; PFAM: formylmethionine deformylase; SPTR: Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase 209365..209871 Calditerrivibrio nitroreducens DSM 19672 10008206 YP_004050282.1 CDS Calni_0206 NC_014758.1 209916 210866 D COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: ddf:DEFDS_2131 D-isomer specific 2-hydroxyacid dehydrogenase catalytic component; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic component; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; d-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein 209916..210866 Calditerrivibrio nitroreducens DSM 19672 10008207 YP_004050283.1 CDS Calni_0207 NC_014758.1 210913 211338 R KEGG: maq:Maqu_3164 preprotein translocase subunit SecB; SPTR: Protein-export protein secB; PFAM: Preprotein translocase subunit SecB; hypothetical protein complement(210913..211338) Calditerrivibrio nitroreducens DSM 19672 10008208 YP_004050284.1 CDS Calni_0208 NC_014758.1 211531 212385 D COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004635: IPR002142; KEGG: ddf:DEFDS_2093 signal peptide peptidase SppA; PFAM: peptidase S49; SPTR: Signal peptide peptidase SppA; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase sppa, 36k type 211531..212385 Calditerrivibrio nitroreducens DSM 19672 10008209 YP_004050285.1 CDS Calni_0209 NC_014758.1 212387 212827 D COGs: COG2703 Hemerythrin; InterPro IPR016131: IPR012827: IPR012312; KEGG: tte:TTE0259 hemerythrin; SPTR: Hemerythrin; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; hemerythrin-like metal-binding protein 212387..212827 Calditerrivibrio nitroreducens DSM 19672 10008210 YP_004050286.1 CDS Calni_0210 NC_014758.1 212858 214123 R COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: ddf:DEFDS_1547 solute:sodium symporter; PFAM: Na+/solute symporter; SPTR: Solute:sodium symporter; PFAM: Sodium:solute symporter family; na+/solute symporter complement(212858..214123) Calditerrivibrio nitroreducens DSM 19672 10008211 YP_004050287.1 CDS Calni_0211 NC_014758.1 214110 214631 R COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: ddf:DEFDS_1548 appr-1-p processing domain protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; SPTR: Appr-1-p processing domain protein; PFAM: Macro domain; appr-1-p processing domain-containing protein complement(214110..214631) Calditerrivibrio nitroreducens DSM 19672 10008212 YP_004050288.1 CDS Calni_0212 NC_014758.1 214781 215566 D COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: ddf:DEFDS_1549 carbon-nitrogen hydrolase family protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Carbon-nitrogen hydrolase family protein; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase 214781..215566 Calditerrivibrio nitroreducens DSM 19672 10008213 YP_004050289.1 CDS Calni_0213 NC_014758.1 215583 217154 D COGs: COG0427 acetyl-CoA hydrolase; InterPro IPR003702; KEGG: dap:Dacet_1280 acetyl-CoA hydrolase; PFAM: acetyl-CoA hydrolase/transferase; PRIAM: acetyl-CoA hydrolase; SPTR: acetyl-CoA hydrolase; PFAM: acetyl-CoA hydrolase/transferase N-terminal domain; acetyl-CoA hydrolase 215583..217154 Calditerrivibrio nitroreducens DSM 19672 10008214 YP_004050290.1 CDS Calni_0214 NC_014758.1 217166 218113 D COGs: COG0679 permease; InterPro IPR004776; KEGG: dap:Dacet_0517 auxin efflux carrier; PFAM: Auxin Efflux Carrier; SPTR: Auxin Efflux Carrier; PFAM: Membrane transport protein; auxin efflux carrier 217166..218113 Calditerrivibrio nitroreducens DSM 19672 10008215 YP_004050291.1 CDS Calni_0215 NC_014758.1 218110 218340 R COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: dap:Dacet_2469 carbon storage regulator, CsrA; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; TIGRFAM: carbon storage regulator; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator, csra complement(218110..218340) Calditerrivibrio nitroreducens DSM 19672 10008216 YP_004050292.1 CDS Calni_0216 NC_014758.1 218344 218811 R COGs: COG1699 conserved hypothetical protein; InterPro IPR003775; KEGG: ddf:DEFDS_2143 flagellar assembly protein FliW; PFAM: protein of unknown function DUF180; SPTR: Flagellar assembly factor fliW; PFAM: FliW protein; hypothetical protein complement(218344..218811) Calditerrivibrio nitroreducens DSM 19672 10008217 YP_004050293.1 CDS Calni_0217 NC_014758.1 218822 222247 R COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR016160; KEGG: ddf:DEFDS_2144 hypothetical protein; SPTR: uncharacterized protein; PFAM: Bacterial flagellin N-terminal helical region; hypothetical protein complement(218822..222247) Calditerrivibrio nitroreducens DSM 19672 10008218 YP_004050294.1 CDS Calni_0218 NC_014758.1 222258 224006 R COGs: COG1256 Flagellar hook-associated protein; InterPro IPR002371: IPR001444: IPR010930; KEGG: ddf:DEFDS_2145 flagellar hook-associated protein 1 FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Flagellar hook-associated protein 1 FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein flgk complement(222258..224006) Calditerrivibrio nitroreducens DSM 19672 10008219 YP_004050295.1 CDS Calni_0219 NC_014758.1 224036 224515 R InterPro IPR007809; KEGG: ddf:DEFDS_2146 hypothetical protein; PFAM: FlgN family protein; SPTR: uncharacterized protein; PFAM: FlgN protein; flgn family protein complement(224036..224515) Calditerrivibrio nitroreducens DSM 19672 10008220 YP_004050296.1 CDS Calni_0220 NC_014758.1 224555 224836 R InterPro IPR007412; KEGG: ddf:DEFDS_2147 negative regulator of flagellin synthesis FlgM; PFAM: Anti-sigma-28 factor FlgM family protein; SPTR: Negative regulator of flagellin synthesis FlgM; PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; anti-sigma-28 factor flgm family protein complement(224555..224836) Calditerrivibrio nitroreducens DSM 19672 10008221 YP_004050297.1 CDS Calni_0221 NC_014758.1 224943 225308 R InterPro IPR019301; KEGG: dap:Dacet_2475 flagellar protein FlgJ-like protein; PFAM: Flagellar protein FlgJ-like; SPTR: Flagellar protein FlgJ-like protein; PFAM: Rod binding protein; flagellar protein flgj complement(224943..225308) Calditerrivibrio nitroreducens DSM 19672 10008222 YP_004050298.1 CDS Calni_0222 NC_014758.1 225320 226399 R COGs: COG1706 Flagellar basal-body P-ring protein; InterPro IPR001782; KEGG: ddf:DEFDS_2149 flagellar P-ring protein FlgI; PFAM: flagellar P-ring protein; SPTR: Flagellar P-ring protein; PFAM: Flagellar P-ring protein; flagellar p-ring protein complement(225320..226399) Calditerrivibrio nitroreducens DSM 19672 10008223 YP_004050299.1 CDS Calni_0223 NC_014758.1 226416 227150 R COGs: COG2063 Flagellar basal body L-ring protein; InterPro IPR000527; KEGG: ddf:DEFDS_2150 flagellar L-ring protein FlgH; PFAM: flagellar L-ring protein; SPTR: Flagellar L-ring protein; PFAM: Flagellar L-ring protein; flagellar l-ring protein complement(226416..227150) Calditerrivibrio nitroreducens DSM 19672 10008224 YP_004050300.1 CDS Calni_0224 NC_014758.1 227874 229418 D InterPro IPR018631: IPR012547; KEGG: saf:SULAZ_0996 conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: Conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 227874..229418 Calditerrivibrio nitroreducens DSM 19672 10008225 YP_004050301.1 CDS Calni_0225 NC_014758.1 229607 230092 R KEGG: ddf:DEFDS_1651 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(229607..230092) Calditerrivibrio nitroreducens DSM 19672 10008226 YP_004050302.1 CDS Calni_0226 NC_014758.1 230285 231820 D COGs: COG0606 ATPase with chaperone activity; InterPro IPR001208: IPR004482: IPR000523: IPR003593; KEGG: ddf:DEFDS_2092 Mg chelatase-related protein; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein; mg chelatase, subunit chli 230285..231820 Calditerrivibrio nitroreducens DSM 19672 10008227 YP_004050303.1 CDS Calni_0227 NC_014758.1 231830 232357 D COGs: COG0703 Shikimate kinase; InterPro IPR000623; KEGG: ddf:DEFDS_0449 shikimate kinase; PFAM: shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; PFAM: Shikimate kinase; shikimate kinase 231830..232357 Calditerrivibrio nitroreducens DSM 19672 10008228 YP_004050304.1 CDS Calni_0228 NC_014758.1 232338 233405 D COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR016303: IPR016037: IPR002658; KEGG: ddf:DEFDS_0450 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 232338..233405 Calditerrivibrio nitroreducens DSM 19672 10008229 YP_004050305.1 CDS Calni_0229 NC_014758.1 233387 234634 D InterPro IPR019734: IPR013026: IPR001440; KEGG: ddf:DEFDS_0451 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: uncharacterized protein; tetratricopeptide tpr_1 repeat-containing protein 233387..234634 Calditerrivibrio nitroreducens DSM 19672 10008230 YP_004050306.1 CDS Calni_0230 NC_014758.1 234627 234977 D KEGG: ddf:DEFDS_0452 hypothetical protein; SPTR: uncharacterized protein; PFAM: Roadblock/LC7 domain; hypothetical protein 234627..234977 Calditerrivibrio nitroreducens DSM 19672 10008231 YP_004050307.1 CDS Calni_0231 NC_014758.1 234977 235408 D COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874; KEGG: apa:APP7_1952 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 234977..235408 Calditerrivibrio nitroreducens DSM 19672 10008232 YP_004050308.1 CDS Calni_0232 NC_014758.1 235425 236480 D COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR001131: IPR000587: IPR000994; KEGG: ddf:DEFDS_0454 X-Pro dipeptidase; PFAM: peptidase M24; creatinase; SPTR: X-Pro dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; peptidase m24 235425..236480 Calditerrivibrio nitroreducens DSM 19672 10008233 YP_004050309.1 CDS Calni_0233 NC_014758.1 236533 237099 D COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterPro IPR013852: IPR020599: IPR011768: IPR013185: IPR 001059: IPR015365; KEGG: ddf:DEFDS_0455 translation elongation factor P; PFAM: Elongation factor P; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; SPTR: Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor p 236533..237099 Calditerrivibrio nitroreducens DSM 19672 10008234 YP_004050310.1 CDS Calni_0234 NC_014758.1 237186 237662 D COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249: IPR000089; KEGG: ddf:DEFDS_0456 acetyl-CoA carboxylase biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; biotin carboxyl carrier protein 237186..237662 Calditerrivibrio nitroreducens DSM 19672 10008235 YP_004050311.1 CDS Calni_0235 NC_014758.1 237670 239007 D COGs: COG4770 acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005479: IPR011761: IPR011764: IPR004549: IPR 005481: IPR005482; KEGG: ddf:DEFDS_0457 acetyl-CoA carboxylase biotin carboxylase subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: acetyl-CoA carboxylase, biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; biotin carboxylase 237670..239007 Calditerrivibrio nitroreducens DSM 19672 10008236 YP_004050312.1 CDS Calni_0236 NC_014758.1 239020 240609 D InterPro IPR020606: IPR019734: IPR013026: IPR001440; KEGG: ddf:DEFDS_0458 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: uncharacterized protein; tetratricopeptide tpr_1 repeat-containing protein 239020..240609 Calditerrivibrio nitroreducens DSM 19672 10008237 YP_004050313.1 CDS Calni_0237 NC_014758.1 240606 241250 D KEGG: dap:Dacet_0068 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 240606..241250 Calditerrivibrio nitroreducens DSM 19672 10008238 YP_004050314.1 CDS Calni_0238 NC_014758.1 241253 242086 D COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterPro IPR004424: IPR006204: IPR013750; KEGG: ddf:DEFDS_0460 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2c-methyl-d-erythritol kinase 241253..242086 Calditerrivibrio nitroreducens DSM 19672 10008239 YP_004050315.1 CDS Calni_0239 NC_014758.1 242095 243042 D COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000842: IPR005946: IPR000836; KEGG: ddf:DEFDS_0461 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 242095..243042 Calditerrivibrio nitroreducens DSM 19672 10008240 YP_004050316.1 CDS Calni_0240 NC_014758.1 243045 243644 D COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR018171: IPR001328; KEGG: dap:Dacet_0071 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 243045..243644 Calditerrivibrio nitroreducens DSM 19672 10008241 YP_004050317.1 CDS Calni_0241 NC_014758.1 243632 245650 D COGs: COG3808 Inorganic pyrophosphatase; InterPro IPR004131; KEGG: ddf:DEFDS_0463 V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: V-type H(+)-translocating pyrophosphatase; TIGRFAM: V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; v-type h(+)-translocating pyrophosphatase 243632..245650 Calditerrivibrio nitroreducens DSM 19672 10008242 YP_004050318.1 CDS Calni_0242 NC_014758.1 245707 246966 D COGs: COG3174 membrane protein; InterPro IPR003416; KEGG: tgr:Tgr7_2575 hypothetical protein; PFAM: MgtC/SapB transporter; SPTR: uncharacterized protein; PFAM: MgtC family; mgtc/sapb transporter 245707..246966 Calditerrivibrio nitroreducens DSM 19672 10008243 YP_004050319.1 CDS Calni_0243 NC_014758.1 246976 247845 D InterPro IPR000620; KEGG: dap:Dacet_0527 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 246976..247845 Calditerrivibrio nitroreducens DSM 19672 10008244 YP_004050320.1 CDS Calni_0244 NC_014758.1 247845 248732 D InterPro IPR000620; KEGG: ddf:DEFDS_1813 drug/metabolite transporter; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Drug/metabolite transporter; PFAM: EamA-like transporter family; hypothetical protein 247845..248732 Calditerrivibrio nitroreducens DSM 19672 10008245 YP_004050321.1 CDS Calni_0245 NC_014758.1 248725 249606 D InterPro IPR017969: IPR000620; KEGG: ddf:DEFDS_1812 drug/metabolite transporter; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Drug/metabolite transporter; PFAM: EamA-like transporter family; hypothetical protein 248725..249606 Calditerrivibrio nitroreducens DSM 19672 10008246 YP_004050322.1 CDS Calni_0246 NC_014758.1 249620 250573 D COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: ddf:DEFDS_1811 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 249620..250573 Calditerrivibrio nitroreducens DSM 19672 10008247 YP_004050323.1 CDS Calni_0247 NC_014758.1 250566 253946 D COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterPro IPR003726: IPR000489: IPR004223: IPR006158: IPR 003759: IPR011822; KEGG: ddf:DEFDS_1683 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: methionine synthase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methylmalonyl-CoA mutase C-terminal domain; methionine synthase (b12-dependent) 250566..253946 Calditerrivibrio nitroreducens DSM 19672 10008248 YP_004050324.1 CDS Calni_0248 NC_014758.1 253959 255617 D COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020060: IPR001412: IPR004514: IPR020058: IPR 020059; KEGG: dap:Dacet_1019 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; SPTR: Glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 253959..255617 Calditerrivibrio nitroreducens DSM 19672 10008249 YP_004050325.1 CDS Calni_0249 NC_014758.1 255619 256335 D COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: ddf:DEFDS_0049 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: uncharacterized protein; PFAM: DUF218 domain; hypothetical protein 255619..256335 Calditerrivibrio nitroreducens DSM 19672 10008250 YP_004050326.1 CDS Calni_0250 NC_014758.1 256458 257504 D COGs: COG1420 Transcriptional regulator of heat shock gene; InterPro IPR002571: IPR021153; KEGG: dap:Dacet_2890 heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like; SPTR: Heat-inducible transcription repressor hrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA; heat-inducible transcription repressor hrca 256458..257504 Calditerrivibrio nitroreducens DSM 19672 10008251 YP_004050327.1 CDS Calni_0251 NC_014758.1 257497 258075 D COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740; KEGG: ddf:DEFDS_2115 molecular chaperone GrpE; PFAM: GrpE protein; SPTR: Protein grpE; PFAM: GrpE; grpe protein 257497..258075 Calditerrivibrio nitroreducens DSM 19672 10008252 YP_004050328.1 CDS Calni_0252 NC_014758.1 258096 260003 D COGs: COG0443 Molecular chaperone; InterPro IPR001023: IPR018181: IPR012725: IPR013126; KEGG: ddf:DEFDS_2114 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; Fe-S protein assembly chaperone HscA; chaperone protein dnak 258096..260003 Calditerrivibrio nitroreducens DSM 19672 10008253 YP_004050329.1 CDS Calni_0253 NC_014758.1 260165 261265 D COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR003095: IPR018253: IPR001623: IPR001305: IPR 012724: IPR002939; KEGG: dap:Dacet_2887 chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Chaperone protein DnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ; chaperone protein dnaj 260165..261265 Calditerrivibrio nitroreducens DSM 19672 10008254 YP_004050330.1 CDS Calni_0254 NC_014758.1 261287 262615 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR020441: IPR002078: IPR001789: IPR002197: IPR 003593; KEGG: ddf:DEFDS_2111 two-component system, NtrC family, transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two-component system, NtrC family, transcriptional regulator; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator 261287..262615 Calditerrivibrio nitroreducens DSM 19672 10008255 YP_004050331.1 CDS Calni_0255 NC_014758.1 262618 264006 D COGs: COG0165 Argininosuccinate lyase; InterPro IPR003031: IPR000362: IPR020557: IPR009049; KEGG: dap:Dacet_2886 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 262618..264006 Calditerrivibrio nitroreducens DSM 19672 10008256 YP_004050332.1 CDS Calni_0256 NC_014758.1 264204 266645 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089: IPR000727; KEGG: ddf:DEFDS_1544 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis protein; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 264204..266645 Calditerrivibrio nitroreducens DSM 19672 10008257 YP_004050333.1 CDS Calni_0257 NC_014758.1 266699 267301 D InterPro IPR013217; KEGG: ddf:DEFDS_1657 S-adenosylmethionine-dependent methyltransferase; PFAM: Methyltransferase type 12; SPTR: S-adenosylmethionine-dependent methyltransferase; PFAM: Methyltransferase small domain; type 12 methyltransferase 266699..267301 Calditerrivibrio nitroreducens DSM 19672 10008258 YP_004050334.1 CDS Calni_0258 NC_014758.1 267620 269020 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR005467: IPR003660: IPR003661: IPR 003594; KEGG: tye:THEYE_A1801 sensor protein AtoS; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Sensor protein AtoS; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 267620..269020 Calditerrivibrio nitroreducens DSM 19672 10008259 YP_004050335.1 CDS Calni_0259 NC_014758.1 269013 270380 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR020441: IPR002078: IPR001789: IPR002197: IPR 003593; KEGG: gem:GM21_3903 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator 269013..270380 Calditerrivibrio nitroreducens DSM 19672 10008260 YP_004050336.1 CDS Calni_0260 NC_014758.1 270654 271088 D KEGG: rfr:Rfer_3349 histone protein; SPTR: Histone protein; histone protein 270654..271088 Calditerrivibrio nitroreducens DSM 19672 10008261 YP_004050337.1 CDS Calni_0261 NC_014758.1 271135 271737 R COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: ddf:DEFDS_0260 protein-L-isoaspartate (D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-l-isoaspartate o-methyltransferase complement(271135..271737) Calditerrivibrio nitroreducens DSM 19672 10008262 YP_004050338.1 CDS Calni_0262 NC_014758.1 271737 272612 R COGs: COG0548 acetylglutamate kinase; InterPro IPR001057: IPR011148: IPR004662: IPR001048; KEGG: dap:Dacet_0443 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: acetylglutamate kinase; SPTR: acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; n-acetylglutamate kinase complement(271737..272612) Calditerrivibrio nitroreducens DSM 19672 10008263 YP_004050339.1 CDS Calni_0263 NC_014758.1 272615 273757 R InterPro IPR011701; KEGG: afu:AF0367 oxalate/formate antiporter (OxlT-2); PFAM: major facilitator superfamily MFS_1; SPTR: Oxalate/formate antiporter (OxlT-2); PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(272615..273757) Calditerrivibrio nitroreducens DSM 19672 10008264 YP_004050340.1 CDS Calni_0264 NC_014758.1 273799 274518 R COGs: COG2014 conserved hypothetical protein; KEGG: ddf:DEFDS_1903 hypothetical protein; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF364); hypothetical protein complement(273799..274518) Calditerrivibrio nitroreducens DSM 19672 10008265 YP_004050341.1 CDS Calni_0265 NC_014758.1 274523 274807 R COGs: COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; InterPro IPR008179: IPR021130; KEGG: ddf:DEFDS_1904 phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; SPTR: Phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP diphosphatase complement(274523..274807) Calditerrivibrio nitroreducens DSM 19672 10008266 YP_004050342.1 CDS Calni_0266 NC_014758.1 274820 275581 R COGs: COG0107 Imidazoleglycerol-phosphate synthase; InterPro IPR004651: IPR006062; KEGG: dap:Dacet_3004 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; imidazole glycerol phosphate synthase subunit hisf complement(274820..275581) Calditerrivibrio nitroreducens DSM 19672 10008267 YP_004050343.1 CDS Calni_0267 NC_014758.1 275737 277239 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR004358: IPR005467: IPR001789: IPR003661: IPR 003594; KEGG: ddf:DEFDS_0953 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: uncharacterized protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; response regulator receiver sensor signal transduction histidine kinase 275737..277239 Calditerrivibrio nitroreducens DSM 19672 10008268 YP_004050344.1 CDS Calni_0268 NC_014758.1 277226 277897 D COGs: COG5581 glycosyltransferase; InterPro IPR009875; KEGG: ddf:DEFDS_0952 type IV pilus assembly protein PilZ; PFAM: type IV pilus assembly PilZ; SPTR: Type IV pilus assembly protein PilZ; PFAM: PilZ domain; type IV pilus assembly pilz 277226..277897 Calditerrivibrio nitroreducens DSM 19672 10008269 YP_004050345.1 CDS Calni_0269 NC_014758.1 277909 278238 D COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645: IPR003658; KEGG: ddf:DEFDS_0951 anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma-factor antagonist 277909..278238 Calditerrivibrio nitroreducens DSM 19672 10008270 YP_004050346.1 CDS Calni_0270 NC_014758.1 278213 279412 D COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: ddf:DEFDS_0950 hypothetical protein; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; SPTR: uncharacterized protein; PFAM: CheR methyltransferase, SAM binding domain; mcp methyltransferase, cher-type 278213..279412 Calditerrivibrio nitroreducens DSM 19672 10008271 YP_004050347.1 CDS Calni_0271 NC_014758.1 279422 280474 D COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR004383: IPR007197; KEGG: dap:Dacet_1903 radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family; 23S rRNA m(2)a-2503 methyltransferase 279422..280474 Calditerrivibrio nitroreducens DSM 19672 10008272 YP_004050348.1 CDS Calni_0272 NC_014758.1 280464 280919 D COGs: COG1225 Peroxiredoxin; InterPro IPR017936: IPR000866; KEGG: ddf:DEFDS_0947 bacterioferritin comigratory protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Bacterioferritin comigratory protein; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen 280464..280919 Calditerrivibrio nitroreducens DSM 19672 10008273 YP_004050349.1 CDS Calni_0273 NC_014758.1 280972 281187 D InterPro IPR003761; KEGG: ddf:DEFDS_0946 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; SPTR: Exodeoxyribonuclease 7 small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease vii small subunit 280972..281187 Calditerrivibrio nitroreducens DSM 19672 10008274 YP_004050350.1 CDS Calni_0274 NC_014758.1 281177 282073 D COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: dap:Dacet_1901 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase; farnesyl-diphosphate synthase 281177..282073 Calditerrivibrio nitroreducens DSM 19672 10008275 YP_004050351.1 CDS Calni_0275 NC_014758.1 282083 283945 D COGs: COG1154 Deoxyxylulose-5-phosphate synthase; InterPro IPR005474: IPR020826: IPR005477: IPR005475: IPR 005476; KEGG: ddf:DEFDS_0944 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-d-xylulose-5-phosphate synthase 282083..283945 Calditerrivibrio nitroreducens DSM 19672 10008276 YP_004050352.1 CDS Calni_0276 NC_014758.1 283963 284778 D COGs: COG1189 rRNA methylase; InterPro IPR002942: IPR004538: IPR002877; KEGG: dap:Dacet_1899 hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Hemolysin A; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein; hemolysin a 283963..284778 Calditerrivibrio nitroreducens DSM 19672 10008277 YP_004050353.1 CDS Calni_0277 NC_014758.1 284741 285592 D COGs: COG0061 sugar kinase; InterPro IPR002504; KEGG: ddf:DEFDS_0942 NAD(+) kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD kinase; ATP-nad/acox kinase 284741..285592 Calditerrivibrio nitroreducens DSM 19672 10008278 YP_004050354.1 CDS Calni_0278 NC_014758.1 285593 287236 D COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604: IPR003395; KEGG: ddf:DEFDS_1599 DNA repair protein RecN; PFAM: SMC domain protein; SPTR: DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein recn 285593..287236 Calditerrivibrio nitroreducens DSM 19672 10008279 YP_004050355.1 CDS Calni_0279 NC_014758.1 287233 287859 D COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: ddf:DEFDS_1598 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: uncharacterized protein; PFAM: SNARE associated Golgi protein; hypothetical protein 287233..287859 Calditerrivibrio nitroreducens DSM 19672 10008280 YP_004050356.1 CDS Calni_0280 NC_014758.1 287843 288976 D COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: ddf:DEFDS_1597 peptidase M23/M37 family; PFAM: Peptidase M23; SPTR: Peptidase, M23/M37 family; PFAM: Peptidase family M23; peptidase m23 287843..288976 Calditerrivibrio nitroreducens DSM 19672 10008281 YP_004050357.1 CDS Calni_0281 NC_014758.1 289036 290247 D COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR000802: IPR004680; KEGG: ddf:DEFDS_1180 citrate transporter; PFAM: Citrate transporter; SPTR: Citrate transporter; PFAM: Citrate transporter; citrate transporter 289036..290247 Calditerrivibrio nitroreducens DSM 19672 10008282 YP_004050358.1 CDS Calni_0282 NC_014758.1 290356 290565 D InterPro IPR017900: IPR017896; KEGG: ddf:DEFDS_0633 2-oxoacid oxidoreductase subunit delta; SPTR: 2-oxoacid oxidoreductase, delta subunit; PFAM: 4Fe-4S binding domain; 2-oxoglutarate ferredoxin oxidoreductase subunit delta 290356..290565 Calditerrivibrio nitroreducens DSM 19672 10008283 YP_004050359.1 CDS Calni_0283 NC_014758.1 290576 291625 D COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: ddf:DEFDS_0634 2-oxoacid oxidoreductase subunit alpha; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: 2-oxoacid oxidoreductase, alpha subunit; PFAM: domain; Transketolase, C-terminal domain; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 290576..291625 Calditerrivibrio nitroreducens DSM 19672 10008284 YP_004050360.1 CDS Calni_0284 NC_014758.1 291629 292375 D COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: ddf:DEFDS_0635 2-oxoacid oxidoreductase subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: 2-oxoacid oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate tpp-binding domain-containing protein 291629..292375 Calditerrivibrio nitroreducens DSM 19672 10008285 YP_004050361.1 CDS Calni_0285 NC_014758.1 292375 292920 D COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: ddf:DEFDS_0636 2-oxoacid oxidoreductase subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; SPTR: 2-oxoacid oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase, catalytic domain 292375..292920 Calditerrivibrio nitroreducens DSM 19672 10008286 YP_004050362.1 CDS Calni_0286 NC_014758.1 293011 293283 D COGs: COG1254 Acylphosphatase; InterPro IPR020456: IPR017968: IPR001792; KEGG: ddf:DEFDS_0637 acylphosphatase; PFAM: acylphosphatase; SPTR: Acylphosphatase; PFAM: Acylphosphatase; acylphosphatase 293011..293283 Calditerrivibrio nitroreducens DSM 19672 10008287 YP_004050363.1 CDS Calni_0287 NC_014758.1 293292 294236 D COGs: COG0679 permease; InterPro IPR004776; KEGG: pin:Ping_3151 auxin efflux carrier; PFAM: Auxin Efflux Carrier; SPTR: Auxin Efflux Carrier; manually curated; PFAM: Membrane transport protein; auxin efflux carrier 293292..294236 Calditerrivibrio nitroreducens DSM 19672 10008288 YP_004050364.1 CDS Calni_0288 NC_014758.1 294524 295384 R COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115; KEGG: sta:STHERM_c16040 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; PRIAM: 3-hydroxyisobutyrate dehydrogenase; SPTR: 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase complement(294524..295384) Calditerrivibrio nitroreducens DSM 19672 10008290 YP_004050365.1 CDS Calni_0289 NC_014758.1 295556 297202 D COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845: IPR000873; KEGG: ddf:DEFDS_0569 acyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: Acyl-CoA synthase; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase 295556..297202 Calditerrivibrio nitroreducens DSM 19672 10008291 YP_004050366.1 CDS Calni_0290 NC_014758.1 297211 298857 D COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: ddf:DEFDS_2074 acetyl-CoA synthetase family protein; PFAM: AMP-dependent synthetase and ligase; SPTR: acetyl-CoA synthetase family protein; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase 297211..298857 Calditerrivibrio nitroreducens DSM 19672 10008292 YP_004050367.1 CDS Calni_0291 NC_014758.1 299164 300477 D InterPro IPR002559; KEGG: sso:SSO1775 transposase ISC1359; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4 family protein; PFAM: Transposase DDE domain; transposase is4 family protein 299164..300477 Calditerrivibrio nitroreducens DSM 19672 10008293 YP_004050368.1 CDS Calni_0292 NC_014758.1 300675 301916 D COGs: COG1158 Transcription termination factor; InterPro IPR004665: IPR011112: IPR011113: IPR000194: IPR 011129: IPR003593; KEGG: ddf:DEFDS_0096 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: Cold shock protein; AAA ATPase; SPTR: Transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor rho 300675..301916 Calditerrivibrio nitroreducens DSM 19672 10008294 YP_004050369.1 CDS Calni_0293 NC_014758.1 302010 302222 D COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: ddf:DEFDS_0097 50S ribosomal protein L31; PFAM: ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 302010..302222 Calditerrivibrio nitroreducens DSM 19672 10008295 YP_004050370.1 CDS Calni_0294 NC_014758.1 302235 302960 D COGs: COG1351 alternative thymidylate synthase; InterPro IPR003669; KEGG: ddf:DEFDS_0098 FAD-dependent thymidylate synthase; PFAM: thymidylate synthase complementing protein ThyX; SPTR: FAD-dependent thymidylate synthase; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent; thymidylate synthase (fad) 302235..302960 Calditerrivibrio nitroreducens DSM 19672 10008296 YP_004050371.1 CDS Calni_0295 NC_014758.1 302979 303884 D COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: ddf:DEFDS_0099 hypothetical protein; PFAM: protein of unknown function DUF1385; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1385); hypothetical protein 302979..303884 Calditerrivibrio nitroreducens DSM 19672 10008297 YP_004050372.1 CDS Calni_0296 NC_014758.1 303877 304947 D COGs: COG0216 Protein chain release factor A; InterPro IPR000352: IPR004373: IPR005139; KEGG: ddf:DEFDS_0100 peptide chain release factor RF-1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 303877..304947 Calditerrivibrio nitroreducens DSM 19672 10008298 YP_004050373.1 CDS Calni_0297 NC_014758.1 304965 305792 D COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR002052: IPR004556: IPR019874: IPR007848; KEGG: ddf:DEFDS_0101 modification methylase HemK family; PFAM: methyltransferase small; SPTR: Modification methylase, HemK family; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-n5) methyltransferase, release factor-specific 304965..305792 Calditerrivibrio nitroreducens DSM 19672 10008299 YP_004050374.1 CDS Calni_0298 NC_014758.1 305774 307036 D COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR005750: IPR001986; KEGG: ddf:DEFDS_0102 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 305774..307036 Calditerrivibrio nitroreducens DSM 19672 10008300 YP_004050375.1 CDS Calni_0299 NC_014758.1 307029 307649 D COGs: COG0040 ATP phosphoribosyltransferase; InterPro IPR018198: IPR013820; KEGG: dap:Dacet_2297 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase 307029..307649 Calditerrivibrio nitroreducens DSM 19672 10008301 YP_004050376.1 CDS Calni_0300 NC_014758.1 307646 309877 D COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474: IPR010827: IPR000184; KEGG: ddf:DEFDS_0104 hypothetical protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: uncharacterized protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, yaet protein 307646..309877 Calditerrivibrio nitroreducens DSM 19672 10008302 YP_004050377.1 CDS Calni_0301 NC_014758.1 309894 310415 D InterPro IPR005632; KEGG: ddf:DEFDS_0105 outer membrane protein OmpH; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein OmpH; PFAM: Outer membrane protein (OmpH-like); outer membrane chaperone skp (omph) 309894..310415 Calditerrivibrio nitroreducens DSM 19672 10008303 YP_004050378.1 CDS Calni_0302 NC_014758.1 310394 311410 D COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR018357: IPR007691: IPR001451; KEGG: ddf:DEFDS_0106 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase 310394..311410 Calditerrivibrio nitroreducens DSM 19672 10008304 YP_004050379.1 CDS Calni_0303 NC_014758.1 311411 311851 D COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR010084: IPR013114; KEGG: ddf:DEFDS_0107 3R-hydroxymyristoyl ACP dehydrase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; beta-hydroxyacyl-(ACP) dehydratase FabZ 311411..311851 Calditerrivibrio nitroreducens DSM 19672 10008305 YP_004050380.1 CDS Calni_0304 NC_014758.1 311861 312637 D COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137: IPR001451; KEGG: ddf:DEFDS_0108 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam O-acyltransferase; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluco samO-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(ACP)--UDP-N-acetylglucosamine O-acyltransferase 311861..312637 Calditerrivibrio nitroreducens DSM 19672 10008306 YP_004050381.1 CDS Calni_0305 NC_014758.1 312634 313602 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: ddf:DEFDS_0109 oxidoreductase; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 312634..313602 Calditerrivibrio nitroreducens DSM 19672 10008307 YP_004050382.1 CDS Calni_0306 NC_014758.1 313604 314416 D COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: ddf:DEFDS_0110 hypothetical protein; PFAM: protein of unknown function DUF1009; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1009); hypothetical protein 313604..314416 Calditerrivibrio nitroreducens DSM 19672 10008308 YP_004050383.1 CDS Calni_0307 NC_014758.1 314413 314877 D COGs: COG1406 inhibitor of MCP methylation homolog of CheC; InterPro IPR007597; KEGG: ddf:DEFDS_0111 hypothetical protein; PFAM: CheC domain protein; SPTR: uncharacterized protein; PFAM: CheC-like family; chec domain-containing protein 314413..314877 Calditerrivibrio nitroreducens DSM 19672 10008309 YP_004050384.1 CDS Calni_0308 NC_014758.1 314886 315665 D COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627: IPR000045: IPR014032; KEGG: ddf:DEFDS_0112 type IV prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; PRIAM: Prepilin peptidase; SPTR: Type IV prepilin peptidase; PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; prepilin peptidase 314886..315665 Calditerrivibrio nitroreducens DSM 19672 10008310 YP_004050385.1 CDS Calni_0309 NC_014758.1 315675 316877 D COGs: COG0162 Tyrosyl-tRNA synthetase; InterPro IPR002942: IPR001412: IPR002305: IPR002307; KEGG: ddf:DEFDS_0113 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 315675..316877 Calditerrivibrio nitroreducens DSM 19672 10008311 YP_004050386.1 CDS Calni_0310 NC_014758.1 316889 318133 D COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: ddf:DEFDS_0114 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1015); hypothetical protein 316889..318133 Calditerrivibrio nitroreducens DSM 19672 10008312 YP_004050387.1 CDS Calni_0311 NC_014758.1 318140 319102 D COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942: IPR006224: IPR006145: IPR006225; KEGG: ddf:DEFDS_1986 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; pseudouridine synthase, rlua family 318140..319102 Calditerrivibrio nitroreducens DSM 19672 10008313 YP_004050388.1 CDS Calni_0312 NC_014758.1 319295 319648 D COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: ddf:DEFDS_1985 NADH-quinone oxidoreductase subunit A; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH dehydrogenase subunit A 319295..319648 Calditerrivibrio nitroreducens DSM 19672 10008314 YP_004050389.1 CDS Calni_0313 NC_014758.1 319639 320115 D COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006137: IPR006138; KEGG: ddf:DEFDS_1984 NADH-quinone oxidoreductase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH dehydrogenase subunit b 319639..320115 Calditerrivibrio nitroreducens DSM 19672 10008315 YP_004050390.1 CDS Calni_0314 NC_014758.1 320124 320618 D COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR020396: IPR001268; KEGG: ddf:DEFDS_1983 NADH-quinone oxidoreductase subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: NADH-quinone oxidoreductase; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; NADH dehydrogenase subunit c 320124..320618 Calditerrivibrio nitroreducens DSM 19672 10008316 YP_004050391.1 CDS Calni_0315 NC_014758.1 320632 321825 D COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR014029: IPR001135: IPR010219; KEGG: ddf:DEFDS_1982 NADH-quinone oxidoreductase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH dehydrogenase subunit d 320632..321825 Calditerrivibrio nitroreducens DSM 19672 10008317 YP_004050392.1 CDS Calni_0316 NC_014758.1 321838 322332 D COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: ddf:DEFDS_1981 NADH-quinone oxidoreductase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH dehydrogenase subunit e 321838..322332 Calditerrivibrio nitroreducens DSM 19672 10008318 YP_004050393.1 CDS Calni_0317 NC_014758.1 322345 324132 D COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR017896: IPR017900: IPR001949: IPR011538: IPR 019554: IPR019575; KEGG: ddf:DEFDS_1980 NADH-quinone oxidoreductase subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NADH dehydrogenase (quinone) 322345..324132 Calditerrivibrio nitroreducens DSM 19672 10008319 YP_004050394.1 CDS Calni_0318 NC_014758.1 324147 326435 D COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR001041: IPR017896: IPR017900: IPR000283: IPR 019574: IPR006963: IPR006656: IPR006657; KEGG: ddf:DEFDS_1979 NADH-quinone oxidoreductase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: NADH-quinone oxidoreductase, G subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; NADH dehydrogenase subunit g 324147..326435 Calditerrivibrio nitroreducens DSM 19672 10008320 YP_004050395.1 CDS Calni_0319 NC_014758.1 326428 327222 D InterPro IPR019734: IPR013026: IPR001440; KEGG: tet:TTHERM_00319980 TPR Domain containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR Domain containing protein; PFAM: Tetratricopeptide repeat; tetratricopeptide tpr_1 repeat-containing protein 326428..327222 Calditerrivibrio nitroreducens DSM 19672 10008321 YP_004050396.1 CDS Calni_0320 NC_014758.1 327212 328201 D COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086: IPR001694; KEGG: ddf:DEFDS_1978 NADH-quinone oxidoreductase subunit H; PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: NADH-quinone oxidoreductase, H subunit; PFAM: NADH dehydrogenase; NADH dehydrogenase subunit h 327212..328201 Calditerrivibrio nitroreducens DSM 19672 10008322 YP_004050397.1 CDS Calni_0321 NC_014758.1 328212 328649 D COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017896: IPR017900: IPR010226; KEGG: ddf:DEFDS_1977 NADH-quinone oxidoreductase subunit I; SPTR: NADH-quinone oxidoreductase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-quinone oxidoreductase subunit i 328212..328649 Calditerrivibrio nitroreducens DSM 19672 10008323 YP_004050398.1 CDS Calni_0322 NC_014758.1 328651 329151 D COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: ddf:DEFDS_1976 NADH-quinone oxidoreductase subunit J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: NADH-quinone oxidoreductase, J subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH dehydrogenase subunit j 328651..329151 Calditerrivibrio nitroreducens DSM 19672 10008324 YP_004050399.1 CDS Calni_0323 NC_014758.1 329160 329459 D COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: ddf:DEFDS_1975 NADH-quinone oxidoreductase subunit K; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: NADH-quinone oxidoreductase subunit K; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH dehydrogenase subunit k 329160..329459 Calditerrivibrio nitroreducens DSM 19672 10008325 YP_004050400.1 CDS Calni_0324 NC_014758.1 329470 331380 D COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001516: IPR001750: IPR003916: IPR018393: IPR 003945; KEGG: ddf:DEFDS_1974 NADH-quinone oxidoreductase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: NADH-quinone oxidoreductase, L subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; NADH dehydrogenase subunit l 329470..331380 Calditerrivibrio nitroreducens DSM 19672 10008326 YP_004050401.1 CDS Calni_0325 NC_014758.1 331394 332890 D COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR001750: IPR003918: IPR010227; KEGG: ddf:DEFDS_1973 NADH-quinone oxidoreductase subunit M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH-quinone oxidoreductase, M subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; NADH dehydrogenase subunit m 331394..332890 Calditerrivibrio nitroreducens DSM 19672 10008327 YP_004050402.1 CDS Calni_0326 NC_014758.1 332903 334330 D COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR001750: IPR010096; KEGG: ddf:DEFDS_1972 NADH-quinone oxidoreductase subunit N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH-quinone oxidoreductase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; NADH dehydrogenase subunit n 332903..334330 Calditerrivibrio nitroreducens DSM 19672 10008328 YP_004050403.1 CDS Calni_0327 NC_014758.1 334339 334800 D InterPro IPR003251; KEGG: ddf:DEFDS_1971 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; PFAM: Rubrerythrin; rubrerythrin 334339..334800 Calditerrivibrio nitroreducens DSM 19672 10008329 YP_004050404.1 CDS Calni_0328 NC_014758.1 334896 335906 D COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR006195: IPR004188: IPR002319: IPR004529; KEGG: ddf:DEFDS_1622 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; SPTR: Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 334896..335906 Calditerrivibrio nitroreducens DSM 19672 10008330 YP_004050405.1 CDS Calni_0329 NC_014758.1 335916 338285 D COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterPro IPR002547: IPR005121: IPR005146: IPR005147: IPR 004532; KEGG: ddf:DEFDS_1621 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/4 domain protein; t-RNA-binding domain-containing protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta 335916..338285 Calditerrivibrio nitroreducens DSM 19672 10008331 YP_004050406.1 CDS Calni_0330 NC_014758.1 338360 338545 D KEGG: lhk:LHK_01945 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF904); hypothetical protein 338360..338545 Calditerrivibrio nitroreducens DSM 19672 10008332 YP_004050407.1 CDS Calni_0331 NC_014758.1 338555 338806 D KEGG: ddf:DEFDS_0478 hypothetical protein; SPTR: uncharacterized protein; PFAM: Cell division protein ZapA; hypothetical protein 338555..338806 Calditerrivibrio nitroreducens DSM 19672 10008333 YP_004050408.1 CDS Calni_0332 NC_014758.1 338989 340200 D COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR002464: IPR003959: IPR003593; KEGG: dap:Dacet_1923 ATPase AAA; PFAM: ATPase AAA; SMART: AAA ATPase; SPTR: ATPase AAA; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); ATPase AAA 338989..340200 Calditerrivibrio nitroreducens DSM 19672 10008335 YP_004050409.1 CDS Calni_0333 NC_014758.1 340190 340729 D COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: ddf:DEFDS_0480 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase 340190..340729 Calditerrivibrio nitroreducens DSM 19672 10008336 YP_004050410.1 CDS Calni_0334 NC_014758.1 340733 342295 D COGs: COG1418 HD superfamily hydrolase; InterPro IPR004088: IPR018111: IPR006674: IPR004087: IPR 003607: IPR017705: IPR006675; KEGG: ddf:DEFDS_0481 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: uncharacterized protein; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; metal dependent phosphohydrolase 340733..342295 Calditerrivibrio nitroreducens DSM 19672 10008337 YP_004050411.1 CDS Calni_0335 NC_014758.1 342296 343081 D COGs: COG1692 conserved hypothetical protein; InterPro IPR004843: IPR005235; KEGG: ddf:DEFDS_0482 hypothetical protein; PFAM: metallophosphoesterase; SPTR: uncharacterized protein; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; metallophosphoesterase 342296..343081 Calditerrivibrio nitroreducens DSM 19672 10008338 YP_004050412.1 CDS Calni_0336 NC_014758.1 343083 343991 D COGs: COG0379 Quinolinate synthase; InterPro IPR003473; KEGG: ddf:DEFDS_0483 quinolinate synthase subunit A; PFAM: Quinolinate synthetase A; PRIAM: Quinolinate synthase; SPTR: Quinolinate synthase, subunit A; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase a 343083..343991 Calditerrivibrio nitroreducens DSM 19672 10008339 YP_004050413.1 CDS Calni_0337 NC_014758.1 344010 344423 D COGs: COG1832 CoA-binding protein; InterPro IPR003781; KEGG: ddf:DEFDS_1675 hypothetical protein; PFAM: CoA-binding domain protein; SPTR: uncharacterized protein; PFAM: CoA binding domain; CoA-binding protein 344010..344423 Calditerrivibrio nitroreducens DSM 19672 10008340 YP_004050414.1 CDS Calni_0338 NC_014758.1 344457 345041 R COGs: COG1309 Transcriptional regulator; InterPro IPR001647: IPR013570; KEGG: ddf:DEFDS_1282 TetR family transcriptional regulator; PFAM: Tetracycline transcriptional regulator YsiA domain-containing protein; regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator complement(344457..345041) Calditerrivibrio nitroreducens DSM 19672 10008341 YP_004050415.1 CDS Calni_0339 NC_014758.1 345034 345975 R COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: gur:Gura_1594 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(345034..345975) Calditerrivibrio nitroreducens DSM 19672 10008342 YP_004050416.1 CDS Calni_0340 NC_014758.1 346054 347334 R COGs: COG2067 Long-chain fatty acid transport protein; InterPro IPR005017; KEGG: dal:Dalk_0288 aromatic hydrocarbon degradation membrane protein; PFAM: membrane protein involved in aromatic hydrocarbon degradation; SPTR: Membrane protein involved in aromatic hydrocarbon degradation; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); aromatic hydrocarbon degradation membrane protein complement(346054..347334) Calditerrivibrio nitroreducens DSM 19672 10008343 YP_004050417.1 CDS Calni_0341 NC_014758.1 347349 347885 R KEGG: ddf:DEFDS_1839 hypothetical protein; SPTR: uncharacterized protein; PFAM: Chalcone-flavanone isomerase; hypothetical protein complement(347349..347885) Calditerrivibrio nitroreducens DSM 19672 10008344 YP_004050418.1 CDS Calni_0342 NC_014758.1 348104 348895 D COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376: IPR001753; KEGG: ddf:DEFDS_1835 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase family; short chain enoyl-CoA hydratase 348104..348895 Calditerrivibrio nitroreducens DSM 19672 10008345 YP_004050419.1 CDS Calni_0343 NC_014758.1 348922 350061 D COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: ddf:DEFDS_1834 butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Butyryl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein 348922..350061 Calditerrivibrio nitroreducens DSM 19672 10008346 YP_004050420.1 CDS Calni_0344 NC_014758.1 350073 352049 D COGs: COG0247 Fe-S oxidoreductase; InterPro IPR017896: IPR017900: IPR004017; KEGG: ddf:DEFDS_1833 iron-sulfur cluster-binding protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Iron-sulfur cluster-binding protein; PFAM: Cysteine-rich domain; Nitrate reductase gamma subunit; hypothetical protein 350073..352049 Calditerrivibrio nitroreducens DSM 19672 10008347 YP_004050421.1 CDS Calni_0345 NC_014758.1 352071 352829 D COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730: IPR012255; KEGG: ddf:DEFDS_1832 electron transfer flavoprotein subunit beta; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein domain; electron transfer flavoprotein subunits alpha/beta 352071..352829 Calditerrivibrio nitroreducens DSM 19672 10008348 YP_004050422.1 CDS Calni_0346 NC_014758.1 352840 353757 D COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR018206: IPR014730: IPR014731: IPR001308; KEGG: ddf:DEFDS_1831 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; electron transfer flavoprotein subunit alpha 352840..353757 Calditerrivibrio nitroreducens DSM 19672 10008349 YP_004050423.1 CDS Calni_0347 NC_014758.1 353765 354064 D KEGG: ddf:DEFDS_1830 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 353765..354064 Calditerrivibrio nitroreducens DSM 19672 10008350 YP_004050424.1 CDS Calni_0348 NC_014758.1 354067 355032 D COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: ddf:DEFDS_1829 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase NPD; SPTR: 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 354067..355032 Calditerrivibrio nitroreducens DSM 19672 10008351 YP_004050425.1 CDS Calni_0349 NC_014758.1 355051 356871 D COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR022272: IPR020845: IPR000873; KEGG: ddf:DEFDS_1468 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Long-chain fatty-acid-CoA ligase; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase 355051..356871 Calditerrivibrio nitroreducens DSM 19672 10008352 YP_004050426.1 CDS Calni_0350 NC_014758.1 356884 359256 D COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR017441: IPR006176: IPR006108: IPR001753; KEGG: ddf:DEFDS_1467 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; SPTR: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase 356884..359256 Calditerrivibrio nitroreducens DSM 19672 10008353 YP_004050427.1 CDS Calni_0351 NC_014758.1 359317 360495 D COGs: COG0183 acetyl-CoA acetyltransferase; InterPro IPR020615: IPR020610: IPR020613: IPR020616: IPR 020617: IPR002155; KEGG: ddf:DEFDS_1466 3-ketoacyl-CoA thiolase; PFAM: Thiolase-like; SPTR: 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; 3-ketoacyl-CoA thiolase 359317..360495 Calditerrivibrio nitroreducens DSM 19672 10008354 YP_004050428.1 CDS Calni_0352 NC_014758.1 360517 362283 D COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: ddf:DEFDS_1465 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein 360517..362283 Calditerrivibrio nitroreducens DSM 19672 10008355 YP_004050429.1 CDS Calni_0353 NC_014758.1 362480 363661 D COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterPro IPR011761: IPR017866: IPR013650: IPR005811: IPR 005809; KEGG: ddf:DEFDS_0920 succinyl-CoA synthase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta 362480..363661 Calditerrivibrio nitroreducens DSM 19672 10008356 YP_004050430.1 CDS Calni_0354 NC_014758.1 363658 364530 D COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR017440: IPR005810: IPR003781: IPR005811; KEGG: nis:NIS_0839 succinyl-CoA synthase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 363658..364530 Calditerrivibrio nitroreducens DSM 19672 10008357 YP_004050431.1 CDS Calni_0355 NC_014758.1 364592 365074 R InterPro IPR009875; KEGG: dap:Dacet_1189 type IV pilus assembly PilZ; PFAM: type IV pilus assembly PilZ; SPTR: Type IV pilus assembly PilZ; PFAM: PilZ domain; type IV pilus assembly pilz complement(364592..365074) Calditerrivibrio nitroreducens DSM 19672 10008358 YP_004050432.1 CDS Calni_0356 NC_014758.1 365161 366039 R COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: ddf:DEFDS_1268 ATP-binding protein, CobQ/CobB/MinD/ParA family; PFAM: ATPase-like, ParA/MinD; SPTR: ATP-binding protein, CobQ/CobB/MinD/ParA family; PFAM: ParA/MinD ATPase like; ATPase MipZ; atpase-like, para/mind complement(365161..366039) Calditerrivibrio nitroreducens DSM 19672 10008359 YP_004050433.1 CDS Calni_0357 NC_014758.1 366172 366840 D COGs: COG2003 DNA repair protein; InterPro IPR020891: IPR001405; KEGG: ddf:DEFDS_0563 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein radc 366172..366840 Calditerrivibrio nitroreducens DSM 19672 10008360 YP_004050434.1 CDS Calni_0358 NC_014758.1 366849 367739 D COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: ddf:DEFDS_0565 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NmrA-like family; nad-dependent epimerase/dehydratase 366849..367739 Calditerrivibrio nitroreducens DSM 19672 10008361 YP_004050435.1 CDS Calni_0359 NC_014758.1 367760 368704 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: dap:Dacet_1262 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(367760..368704) Calditerrivibrio nitroreducens DSM 19672 10008362 YP_004050436.1 CDS Calni_0360 NC_014758.1 368697 370169 R COGs: COG1190 Lysyl-tRNA synthetase (class II); InterPro IPR006195: IPR004365: IPR004364: IPR002313: IPR 018149; KEGG: ddf:DEFDS_1155 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase complement(368697..370169) Calditerrivibrio nitroreducens DSM 19672 10008363 YP_004050437.1 CDS Calni_0361 NC_014758.1 370259 370732 D COGs: COG0622 phosphoesterase; InterPro IPR004843: IPR000979; KEGG: ddf:DEFDS_1157 phosphodiesterase MJ0936 family; PFAM: metallophosphoesterase; SPTR: Phosphodiesterase, MJ0936 family; TIGRFAM: phosphodiesterase, MJ0936 family; TIGRFAM: phosphoesterase, MJ0936 family; phosphodiesterase, mj0936 family 370259..370732 Calditerrivibrio nitroreducens DSM 19672 10008364 YP_004050438.1 CDS Calni_0362 NC_014758.1 370814 371839 D COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: ddf:DEFDS_1158 cell shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: Cell shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; rod shape-determining protein mreb 370814..371839 Calditerrivibrio nitroreducens DSM 19672 10008365 YP_004050439.1 CDS Calni_0363 NC_014758.1 371827 372639 D COGs: COG1792 Cell shape-determining protein; InterPro IPR007221: IPR005223; KEGG: dap:Dacet_1265 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; rod shape-determining protein mrec 371827..372639 Calditerrivibrio nitroreducens DSM 19672 10008366 YP_004050440.1 CDS Calni_0364 NC_014758.1 372632 373087 D KEGG: dap:Dacet_1266 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 372632..373087 Calditerrivibrio nitroreducens DSM 19672 10008367 YP_004050441.1 CDS Calni_0365 NC_014758.1 373065 374879 D COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311: IPR001460: IPR017790; KEGG: dap:Dacet_1267 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; peptidoglycan glycosyltransferase 373065..374879 Calditerrivibrio nitroreducens DSM 19672 10008368 YP_004050442.1 CDS Calni_0366 NC_014758.1 374863 375981 D COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR018365: IPR001182: IPR011923; KEGG: dap:Dacet_1268 rod shape-determining protein RodA; PFAM: cell cycle protein; SPTR: Rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; cell elongation-specific peptidoglycan biosynthesis regulator roda 374863..375981 Calditerrivibrio nitroreducens DSM 19672 10008369 YP_004050443.1 CDS Calni_0367 NC_014758.1 375978 378368 D COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197: IPR018768: IPR006638; KEGG: ddf:DEFDS_1163 Fe-S oxidoreductases family protein; PFAM: Radical SAM domain protein; Protein of unknown function DUF2344; SMART: Elongator protein 3/MiaB/NifB; SPTR: Fe-S oxidoreductases family protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2344); Radical SAM superfamily; radical SAM domain-containing protein 375978..378368 Calditerrivibrio nitroreducens DSM 19672 10008370 YP_004050444.1 CDS Calni_0368 NC_014758.1 378361 378771 D COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ddf:DEFDS_1164 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; ferric uptake regulator, fur family 378361..378771 Calditerrivibrio nitroreducens DSM 19672 10008371 YP_004050445.1 CDS Calni_0369 NC_014758.1 378811 379674 D InterPro IPR014127; KEGG: dap:Dacet_1270 hypothetical protein; PFAM: hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2400); TIGRFAM: conserved hypothetical protein TIGR02757; hypothetical protein 378811..379674 Calditerrivibrio nitroreducens DSM 19672 10008372 YP_004050446.1 CDS Calni_0370 NC_014758.1 379730 380047 D COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR017936: IPR017937: IPR013766: IPR006662: IPR 005746; KEGG: ddf:DEFDS_1167 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 379730..380047 Calditerrivibrio nitroreducens DSM 19672 10008373 YP_004050447.1 CDS Calni_0371 NC_014758.1 380058 380255 D InterPro IPR013429; KEGG: ddf:DEFDS_1168 hypothetical protein; PFAM: regulatory protein FmdB; SPTR: uncharacterized protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: regulatory protein, FmdB family; regulatory protein, fmdb family 380058..380255 Calditerrivibrio nitroreducens DSM 19672 10008374 YP_004050448.1 CDS Calni_0372 NC_014758.1 380331 380609 R COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dap:Dacet_1449 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Histone family protein DNA-binding protein; PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; histone family protein DNA-binding protein complement(380331..380609) Calditerrivibrio nitroreducens DSM 19672 10008375 YP_004050449.1 CDS Calni_0373 NC_014758.1 380766 381917 D COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR020578: IPR000192; KEGG: ddf:DEFDS_2124 serine--glyoxylate transaminase; PFAM: aminotransferase class V; SPTR: Serine--glyoxylate transaminase; PFAM: Aminotransferase class-V; aminotransferase class v 380766..381917 Calditerrivibrio nitroreducens DSM 19672 10008376 YP_004050450.1 CDS Calni_0374 NC_014758.1 381918 382961 D COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; InterPro IPR006195: IPR002314: IPR004516; KEGG: ddf:DEFDS_2123 ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II (G H P and S); PRIAM: Histidine--tRNA ligase; SPTR: ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); histidine--tRNA ligase 381918..382961 Calditerrivibrio nitroreducens DSM 19672 10008377 YP_004050451.1 CDS Calni_0375 NC_014758.1 382981 384267 D COGs: COG0104 Adenylosuccinate synthase; InterPro IPR018220: IPR001114; KEGG: ddf:DEFDS_2122 adenylosuccinate synthase; PFAM: adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 382981..384267 Calditerrivibrio nitroreducens DSM 19672 10008378 YP_004050452.1 CDS Calni_0376 NC_014758.1 384727 385182 D COGs: COG0691 tmRNA-binding protein; InterPro IPR000037; KEGG: ddf:DEFDS_1882 SsrA RNA (tmRNA)-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; ssra-binding protein 384727..385182 Calditerrivibrio nitroreducens DSM 19672 10008383 YP_004050453.1 CDS Calni_0377 NC_014758.1 385147 385551 R KEGG: nth:Nther_0089 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(385147..385551) Calditerrivibrio nitroreducens DSM 19672 10008384 YP_004050454.1 CDS Calni_0378 NC_014758.1 385544 386059 R KEGG: gfo:GFO_1946 hypothetical protein; SPTR: Hypothetical transmembrane protein; hypothetical protein complement(385544..386059) Calditerrivibrio nitroreducens DSM 19672 10008385 YP_004050455.1 CDS Calni_0379 NC_014758.1 386062 386544 R COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR018488: IPR002373; KEGG: ddf:DEFDS_0233 hypothetical protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: uncharacterized protein; PFAM: Cyclic nucleotide-binding domain; Crp/FNR family transcriptional regulator complement(386062..386544) Calditerrivibrio nitroreducens DSM 19672 10008386 YP_004050456.1 CDS Calni_0380 NC_014758.1 386603 387979 D COGs: COG0114 Fumarase; InterPro IPR020557: IPR000362: IPR018951: IPR003031; KEGG: ddf:DEFDS_0234 fumarate hydratase class II; PFAM: fumarate lyase; Fumarase C-like; SPTR: Fumarate hydratase, class II; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II; fumarase 386603..387979 Calditerrivibrio nitroreducens DSM 19672 10008387 YP_004050457.1 CDS Calni_0381 NC_014758.1 387983 388705 D COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833: IPR010016; KEGG: tga:TGAM_1183 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: uncharacterized protein; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370; allophanate hydrolase subunit 1 387983..388705 Calditerrivibrio nitroreducens DSM 19672 10008388 YP_004050458.1 CDS Calni_0382 NC_014758.1 388698 389636 D COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: toc:Toce_1840 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; PRIAM: Urea carboxylase; SMART: Allophanate hydrolase subunit 2; SPTR: Urea amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; urea amidolyase-like protein 388698..389636 Calditerrivibrio nitroreducens DSM 19672 10008389 YP_004050459.1 CDS Calni_0383 NC_014758.1 389626 390381 D COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: pab:PAB2445 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: LamB/YcsF family protein; PFAM: LamB/YcsF family; lamb/ycsf family protein 389626..390381 Calditerrivibrio nitroreducens DSM 19672 10008390 YP_004050460.1 CDS Calni_0384 NC_014758.1 390378 391337 D COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: cti:RALTA_A1446 TRAP transporter, extracytoplasmic binding receptor component (DctP); PFAM: Extracellular solute-binding protein, family 7; SPTR: TRAP transporter, extracytoplasmic binding receptor component (DctP); PFAM: Bacterial extracellular solute-binding protein, family 7; extracellular solute-binding protein 390378..391337 Calditerrivibrio nitroreducens DSM 19672 10008391 YP_004050461.1 CDS Calni_0385 NC_014758.1 391339 391806 D InterPro IPR007387; KEGG: bbr:BB2986 hypothetical protein; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: membrane protein; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite ATP-independent periplasmic transporter dctq component 391339..391806 Calditerrivibrio nitroreducens DSM 19672 10008392 YP_004050462.1 CDS Calni_0386 NC_014758.1 391803 393104 D COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656: IPR004681; KEGG: dia:Dtpsy_1375 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; trap dicarboxylate transporter subunit DctM 391803..393104 Calditerrivibrio nitroreducens DSM 19672 10008393 YP_004050463.1 CDS Calni_0387 NC_014758.1 393105 394772 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR010822: IPR001932; KEGG: tdn:Suden_0208 response regulator receiver domain-containing protein; PFAM: response regulator receiver; Stage II sporulation protein E; SMART: response regulator receiver; protein phosphatase 2C domain protein; SPTR: Response regulator receiver domain protein (CheY-like); PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE); response regulator receiver modulated protein serine/threonine phosphatase 393105..394772 Calditerrivibrio nitroreducens DSM 19672 10008394 YP_004050464.1 CDS Calni_0388 NC_014758.1 394813 395817 D COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: ddf:DEFDS_1400 TRAP-type transporter substrate-binding protein; SPTR: TRAP-type transport system, substrate-binding protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; TIGRFAM: TRAP transporter solute receptor, TAXI family; trap transporter solute receptor, taxi family 394813..395817 Calditerrivibrio nitroreducens DSM 19672 10008395 YP_004050465.1 CDS Calni_0389 NC_014758.1 395877 397907 D COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656: IPR011853; KEGG: ddf:DEFDS_1399 TRAP-type transporter permease component; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP-type transport system, permease component; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; trap transporter 395877..397907 Calditerrivibrio nitroreducens DSM 19672 10008396 YP_004050466.1 CDS Calni_0390 NC_014758.1 397901 398647 R COGs: COG0101 Pseudouridylate synthase; InterPro IPR020097: IPR001406; KEGG: ddf:DEFDS_0990 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase a complement(397901..398647) Calditerrivibrio nitroreducens DSM 19672 10008397 YP_004050467.1 CDS Calni_0391 NC_014758.1 398625 399338 R KEGG: taf:THA_623 GGDEF domain protein; SPTR: Ggdef domain protein; hypothetical protein complement(398625..399338) Calditerrivibrio nitroreducens DSM 19672 10008398 YP_004050468.1 CDS Calni_0392 NC_014758.1 399304 399504 R COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR003369: IPR006312: IPR003998; KEGG: dap:Dacet_2963 twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Sec-independent protein translocase protein tatA/E homolog; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin-arginine translocation protein, tata/e family subunit complement(399304..399504) Calditerrivibrio nitroreducens DSM 19672 10008399 YP_004050469.1 CDS Calni_0393 NC_014758.1 399841 400284 D InterPro IPR012902; KEGG: ddf:DEFDS_1246 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 399841..400284 Calditerrivibrio nitroreducens DSM 19672 10008400 YP_004050470.1 CDS Calni_0394 NC_014758.1 400281 400817 D InterPro IPR001120: IPR012902; KEGG: ddf:DEFDS_1247 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 400281..400817 Calditerrivibrio nitroreducens DSM 19672 10008401 YP_004050471.1 CDS Calni_0395 NC_014758.1 400817 401554 D InterPro IPR012902; KEGG: ddf:DEFDS_1248 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 400817..401554 Calditerrivibrio nitroreducens DSM 19672 10008402 YP_004050472.1 CDS Calni_0396 NC_014758.1 401564 401938 D KEGG: asa:ASA_3939 MSHA biogenesis protein MshP; SPTR: uncharacterized protein; hypothetical protein 401564..401938 Calditerrivibrio nitroreducens DSM 19672 10008403 YP_004050473.1 CDS Calni_0397 NC_014758.1 401938 403323 D COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); KEGG: ddf:DEFDS_1249 hypothetical protein; SPTR: uncharacterized protein; PFAM: AAA domain (dynein-related subfamily); hypothetical protein 401938..403323 Calditerrivibrio nitroreducens DSM 19672 10008404 YP_004050474.1 CDS Calni_0398 NC_014758.1 403316 404026 D InterPro IPR013026; KEGG: ddf:DEFDS_1250 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 403316..404026 Calditerrivibrio nitroreducens DSM 19672 10008405 YP_004050475.1 CDS Calni_0399 NC_014758.1 404023 405000 D KEGG: ddf:DEFDS_1251 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 404023..405000 Calditerrivibrio nitroreducens DSM 19672 10008406 YP_004050476.1 CDS Calni_0400 NC_014758.1 404997 405557 D KEGG: ddf:DEFDS_1252 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 404997..405557 Calditerrivibrio nitroreducens DSM 19672 10008407 YP_004050477.1 CDS Calni_0401 NC_014758.1 405550 406095 D KEGG: ddf:DEFDS_1253 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 405550..406095 Calditerrivibrio nitroreducens DSM 19672 10008408 YP_004050478.1 CDS Calni_0402 NC_014758.1 406092 406451 D KEGG: ddf:DEFDS_1254 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 406092..406451 Calditerrivibrio nitroreducens DSM 19672 10008409 YP_004050479.1 CDS Calni_0403 NC_014758.1 406461 407738 D COGs: COG4796 Type II secretory pathway component HofQ; InterPro IPR004845: IPR005644: IPR011662: IPR004846: IPR 001775: IPR001814; KEGG: ddf:DEFDS_1255 type IV pilus assembly protein PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; SPTR: Type IV pilus assembly protein PilQ; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type II and iii secretion system protein 406461..407738 Calditerrivibrio nitroreducens DSM 19672 10008410 YP_004050480.1 CDS Calni_0404 NC_014758.1 407854 408573 D InterPro IPR013026; KEGG: ddf:DEFDS_2108 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 407854..408573 Calditerrivibrio nitroreducens DSM 19672 10008411 YP_004050481.1 CDS Calni_0405 NC_014758.1 408573 409358 D COGs: COG1469 conserved hypothetical protein; InterPro IPR003801; KEGG: ddf:DEFDS_2107 hypothetical protein; PFAM: protein of unknown function DUF198; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase folE2; PFAM: Uncharacterized ACR, COG1469; GTP cyclohydrolase i 408573..409358 Calditerrivibrio nitroreducens DSM 19672 10008412 YP_004050482.1 CDS Calni_0406 NC_014758.1 409385 411067 D COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831: IPR003593; KEGG: ddf:DEFDS_1256 type IV pilus assembly protein PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Type IV pilus assembly protein PilB; PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E; type II secretion system protein e 409385..411067 Calditerrivibrio nitroreducens DSM 19672 10008413 YP_004050483.1 CDS Calni_0407 NC_014758.1 411085 412524 D COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803: IPR015273: IPR002308; KEGG: ddf:DEFDS_0838 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 411085..412524 Calditerrivibrio nitroreducens DSM 19672 10008414 YP_004050484.1 CDS Calni_0408 NC_014758.1 412526 413497 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: ddf:DEFDS_0837 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; nad-dependent epimerase/dehydratase 412526..413497 Calditerrivibrio nitroreducens DSM 19672 10008415 YP_004050485.1 CDS Calni_0409 NC_014758.1 413501 414874 D COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR005835: IPR001451: IPR005882; KEGG: dap:Dacet_2836 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; PRIAM: Glucosamine-1-phosphate N-acetyltransferase; SPTR: Bifunctional protein glmU; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; glucosamine-1-phosphate n-acetyltransferase; UDP-N-acetylglucosamine pyrophosphorylase 413501..414874 Calditerrivibrio nitroreducens DSM 19672 10008416 YP_004050486.1 CDS Calni_0410 NC_014758.1 414878 416701 D COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR017932: IPR000583: IPR001347: IPR005855; KEGG: ddf:DEFDS_1947 glucosamine--fructose-6-phosphate aminotransferase; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); SPTR: Glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glutamine--fructose-6-phosphate transaminase 414878..416701 Calditerrivibrio nitroreducens DSM 19672 10008417 YP_004050487.1 CDS Calni_0411 NC_014758.1 416712 417029 D InterPro IPR005631; KEGG: ddf:DEFDS_0926 hypothetical protein; PFAM: protein of unknown function DUF339; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF339); hypothetical protein 416712..417029 Calditerrivibrio nitroreducens DSM 19672 10008418 YP_004050488.1 CDS Calni_0412 NC_014758.1 417276 418049 D COGs: COG1462 Uncharacterized protein involved in formation of curli polymers; InterPro IPR005534; KEGG: sul:SYO3AOP1_0256 hypothetical protein; PFAM: Curli production assembly/transport component CsgG; SPTR: uncharacterized protein; PFAM: Curli production assembly/transport component CsgG; curli production assembly/transport component csgg 417276..418049 Calditerrivibrio nitroreducens DSM 19672 10008419 YP_004050489.1 CDS Calni_0413 NC_014758.1 418391 418882 R COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR017936: IPR017937: IPR000866; KEGG: dap:Dacet_2447 redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen complement(418391..418882) Calditerrivibrio nitroreducens DSM 19672 10008420 YP_004050490.1 CDS Calni_0414 NC_014758.1 419151 424271 R InterPro IPR006626: IPR006558; KEGG: ddf:DEFDS_1152 hypothetical protein; SMART: LamG domain protein jellyroll fold domain protein; Parallel beta-helix repeat; SPTR: uncharacterized protein; LamG domain-containing protein complement(419151..424271) Calditerrivibrio nitroreducens DSM 19672 10008421 YP_004050491.1 CDS Calni_0415 NC_014758.1 424292 424408 R KEGG: ddf:DEFDS_1242 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(424292..424408) Calditerrivibrio nitroreducens DSM 19672 10008422 YP_004050492.1 CDS Calni_0416 NC_014758.1 424520 424864 R KEGG: ddf:DEFDS_1245 hypothetical protein; SPTR: uncharacterized protein; PFAM: Bacterial type II secretion system protein G; hypothetical protein complement(424520..424864) Calditerrivibrio nitroreducens DSM 19672 10008423 YP_004050493.1 CDS Calni_0417 NC_014758.1 424866 426089 R COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076: IPR003004; KEGG: ddf:DEFDS_1244 general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain; type II secretion system f domain complement(424866..426089) Calditerrivibrio nitroreducens DSM 19672 10008424 YP_004050494.1 CDS Calni_0418 NC_014758.1 426153 426611 R InterPro IPR001120: IPR012902; KEGG: ddf:DEFDS_1243 hypothetical protein; SPTR: uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(426153..426611) Calditerrivibrio nitroreducens DSM 19672 10008425 YP_004050495.1 CDS Calni_0419 NC_014758.1 426781 428679 D COGs: COG0021 Transketolase; InterPro IPR005474: IPR005475: IPR005476; KEGG: ddf:DEFDS_0073 hypothetical protein; PFAM: Transketolase domain-containing protein; Transketolase central region; SPTR: uncharacterized protein; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase domain-containing protein 426781..428679 Calditerrivibrio nitroreducens DSM 19672 10008426 YP_004050496.1 CDS Calni_0420 NC_014758.1 428681 429844 R COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: thx:Thet_1040 glycerate kinase; PFAM: glycerate kinase; PRIAM: Glycerate kinase; SPTR: Glycerate kinase; TIGRFAM: glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; glycerate kinase complement(428681..429844) Calditerrivibrio nitroreducens DSM 19672 10008427 YP_004050497.1 CDS Calni_0421 NC_014758.1 429945 430433 D COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: ddf:DEFDS_0189 histidine triad family protein; PFAM: histidine triad (HIT) protein; SPTR: Histidine triad family protein; PFAM: HIT domain; histidine triad (hit) protein 429945..430433 Calditerrivibrio nitroreducens DSM 19672 10008428 YP_004050498.1 CDS Calni_0422 NC_014758.1 430430 430729 D KEGG: ddf:DEFDS_0190 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1049); hypothetical protein 430430..430729 Calditerrivibrio nitroreducens DSM 19672 10008429 YP_004050499.1 CDS Calni_0423 NC_014758.1 430726 431727 D KEGG: ddf:DEFDS_0191 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 430726..431727 Calditerrivibrio nitroreducens DSM 19672 10008430 YP_004050500.1 CDS Calni_0424 NC_014758.1 431732 434284 D COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432: IPR007695: IPR007696: IPR007861: IPR 005748; KEGG: ddf:DEFDS_2173 DNA mismatch repair ATPase MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS IV domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS family domain IV; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein muts 431732..434284 Calditerrivibrio nitroreducens DSM 19672 10008431 YP_004050501.1 CDS Calni_0425 NC_014758.1 434277 434840 D KEGG: ddf:DEFDS_2174 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 434277..434840 Calditerrivibrio nitroreducens DSM 19672 10008432 YP_004050502.1 CDS Calni_0426 NC_014758.1 434872 435240 R KEGG: ddf:DEFDS_1221 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(434872..435240) Calditerrivibrio nitroreducens DSM 19672 10008433 YP_004050503.1 CDS Calni_0427 NC_014758.1 435250 435495 R KEGG: dap:Dacet_0519 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(435250..435495) Calditerrivibrio nitroreducens DSM 19672 10008434 YP_004050504.1 CDS Calni_0428 NC_014758.1 436058 436834 D InterPro IPR010324; KEGG: mct:MCR_0519 type II restriction endonuclease DpnI; PFAM: Dam-replacing family protein; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Dam-replacing family; PFAM: Dam-replacing family; type II site-specific deoxyribonuclease 436058..436834 Calditerrivibrio nitroreducens DSM 19672 10008435 YP_004050505.1 CDS Calni_0429 NC_014758.1 437069 438382 D InterPro IPR002559; KEGG: sso:SSO1775 transposase ISC1359; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4 family protein; PFAM: Transposase DDE domain; transposase is4 family protein 437069..438382 Calditerrivibrio nitroreducens DSM 19672 10008436 YP_004050506.1 CDS Calni_0430 NC_014758.1 438477 439490 D COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR000943: IPR009042: IPR007627: IPR007624: IPR 007630: IPR014284; KEGG: ddf:DEFDS_0258 DNA-directed RNA polymerase sigma 70 factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: DNA-directed RNA polymerase sigma 70 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma 70 subunit, rpod subfamily 438477..439490 Calditerrivibrio nitroreducens DSM 19672 10008437 YP_004050507.1 CDS Calni_0431 NC_014758.1 439487 440665 D COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: dap:Dacet_0447 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; peptidase m24 439487..440665 Calditerrivibrio nitroreducens DSM 19672 10008438 YP_004050508.1 CDS Calni_0432 NC_014758.1 440682 441665 D COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149: IPR014188; KEGG: dap:Dacet_0838 quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Quinone oxidoreductase, YhdH/YhfP family; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; quinone oxidoreductase, yhdh/yhfp family 440682..441665 Calditerrivibrio nitroreducens DSM 19672 10008439 YP_004050509.1 CDS Calni_0433 NC_014758.1 441865 445065 D COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001734: IPR003018: IPR010822: IPR001932; KEGG: ddf:DEFDS_1669 serine phosphatase; PFAM: Stage II sporulation protein E; GAF domain protein; Na+/solute symporter; SMART: protein phosphatase 2C domain protein; GAF domain protein; SPTR: Serine phosphatase; PFAM: Stage II sporulation protein E (SpoIIE); protein serine/threonine phosphatase with gaf(s) sensor(s) 441865..445065 Calditerrivibrio nitroreducens DSM 19672 10008440 YP_004050510.1 CDS Calni_0434 NC_014758.1 445069 447486 R COGs: COG2206 HD-GYP domain; InterPro IPR005467: IPR006674: IPR013656: IPR003594: IPR 003607: IPR000014: IPR006675; KEGG: dap:Dacet_1017 metal dependent phosphohydrolase; PFAM: ATP-binding region ATPase domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: uncharacterized domain HDIG; pas/pac sensor signal transduction histidine kinase complement(445069..447486) Calditerrivibrio nitroreducens DSM 19672 10008441 YP_004050511.1 CDS Calni_0435 NC_014758.1 447611 449326 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089: IPR003660; KEGG: ddf:DEFDS_0847 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: uncharacterized protein; PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 447611..449326 Calditerrivibrio nitroreducens DSM 19672 10008442 YP_004050512.1 CDS Calni_0436 NC_014758.1 449361 450308 R COGs: COG0031 Cysteine synthase; InterPro IPR001216: IPR001926: IPR005856: IPR005859; KEGG: ddf:DEFDS_0207 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase complement(449361..450308) Calditerrivibrio nitroreducens DSM 19672 10008443 YP_004050513.1 CDS Calni_0437 NC_014758.1 450319 451599 R COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR000277: IPR006235; KEGG: ddf:DEFDS_0208 O-acetylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: Cysteine synthase; SPTR: O-acetylhomoserine (Thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; o-acetylhomoserine sulfhydrolase complement(450319..451599) Calditerrivibrio nitroreducens DSM 19672 10008444 YP_004050514.1 CDS Calni_0438 NC_014758.1 451618 452028 R COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ddf:DEFDS_0209 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (transcriptional regulator); BadM/Rrf2 family transcriptional regulator complement(451618..452028) Calditerrivibrio nitroreducens DSM 19672 10008445 YP_004050515.1 CDS Calni_0439 NC_014758.1 452113 452826 R COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: gsu:GSU1281 cobalt ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATPase component NikO of energizing module of nickel ECF transporter; PFAM: ABC transporter; ABC transporter complement(452113..452826) Calditerrivibrio nitroreducens DSM 19672 10008446 YP_004050516.1 CDS Calni_0440 NC_014758.1 452827 453585 R InterPro IPR003339; KEGG: cpy:Cphy_0691 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; SPTR: Cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; cobalt transport protein complement(452827..453585) Calditerrivibrio nitroreducens DSM 19672 10008447 YP_004050517.1 CDS Calni_0441 NC_014758.1 453582 454532 R COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: cbk:CLL_A2030 cobalamin; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: Cobalamin; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; cobalamin (vitamin b12) biosynthesis cbim protein complement(453582..454532) Calditerrivibrio nitroreducens DSM 19672 10008448 YP_004050518.1 CDS Calni_0442 NC_014758.1 454686 455012 D KEGG: ddf:DEFDS_0063 cytochrome c family protein; SPTR: Cytochrome c family protein; cytochrome c family protein 454686..455012 Calditerrivibrio nitroreducens DSM 19672 10008449 YP_004050519.1 CDS Calni_0443 NC_014758.1 455124 456140 D COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037: IPR013099; KEGG: gca:Galf_1204 TrkA-N domain-containing protein; PFAM: TrkA-N domain protein; Ion transport 2 domain protein; TrkA-C domain protein; SPTR: TrkA-N domain protein; PFAM: Ion channel; TrkA-N domain; TrkA-C domain; TrkA domain-containing protein 455124..456140 Calditerrivibrio nitroreducens DSM 19672 10008450 YP_004050520.1 CDS Calni_0444 NC_014758.1 456216 456605 D KEGG: lpa:lpa_01691 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 456216..456605 Calditerrivibrio nitroreducens DSM 19672 10008451 YP_004050521.1 CDS Calni_0445 NC_014758.1 456660 457298 D KEGG: ddf:DEFDS_2154 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 456660..457298 Calditerrivibrio nitroreducens DSM 19672 10008452 YP_004050522.1 CDS Calni_0446 NC_014758.1 457300 458055 D COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR020013: IPR012836; KEGG: ddf:DEFDS_2153 flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; flagellar basal-body rod protein flgf 457300..458055 Calditerrivibrio nitroreducens DSM 19672 10008453 YP_004050523.1 CDS Calni_0447 NC_014758.1 458066 458854 D COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR020013: IPR012834; KEGG: ddf:DEFDS_2152 flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein flgg 458066..458854 Calditerrivibrio nitroreducens DSM 19672 10008454 YP_004050524.1 CDS Calni_0448 NC_014758.1 458861 459706 D COGs: COG1261 Flagellar basal body P-ring biosynthesis protein; InterPro IPR017585; KEGG: ddf:DEFDS_2151 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: flagella basal body P-ring formation protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA; flagella basal body p-ring formation protein flga 458861..459706 Calditerrivibrio nitroreducens DSM 19672 10008455 YP_004050525.1 CDS Calni_0449 NC_014758.1 459732 460115 D COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: dap:Dacet_1712 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Thioesterase superfamily protein; PFAM: Thioesterase superfamily; thioesterase superfamily protein 459732..460115 Calditerrivibrio nitroreducens DSM 19672 10008456 YP_004050526.1 CDS Calni_0450 NC_014758.1 460158 460853 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: dap:Dacet_1013 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 460158..460853 Calditerrivibrio nitroreducens DSM 19672 10008457 YP_004050527.1 CDS Calni_0451 NC_014758.1 460850 462382 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467: IPR003660: IPR003661: IPR003594: IPR 004358; KEGG: ddf:DEFDS_1825 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Two-component sensor histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); integral membrane sensor signal transduction histidine kinase 460850..462382 Calditerrivibrio nitroreducens DSM 19672 10008458 YP_004050528.1 CDS Calni_0452 NC_014758.1 462399 462893 R COGs: COG0250 Transcription antiterminator; InterPro IPR006645; KEGG: ddf:DEFDS_1351 transcriptional activator RfaH; PFAM: NGN domain-containing protein; SMART: NGN domain-containing protein; SPTR: Transcriptional activator RfaH; PFAM: Transcription termination factor nusG; TIGRFAM: transcriptional activator RfaH; nusg antitermination factor complement(462399..462893) Calditerrivibrio nitroreducens DSM 19672 10008459 YP_004050529.1 CDS Calni_0453 NC_014758.1 462914 463543 R COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR004564; KEGG: ddf:DEFDS_0271 hypothetical protein; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: uncharacterized protein; PFAM: Outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein lola complement(462914..463543) Calditerrivibrio nitroreducens DSM 19672 10008460 YP_004050530.1 CDS Calni_0454 NC_014758.1 463610 463948 D InterPro IPR001789; KEGG: cpi:Cpin_3620 two component, sigma54 specific, transcriptional regulator, fis family; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; hypothetical protein 463610..463948 Calditerrivibrio nitroreducens DSM 19672 10008461 YP_004050531.1 CDS Calni_0455 NC_014758.1 463945 464127 D KEGG: pmx:PERMA_0174 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 463945..464127 Calditerrivibrio nitroreducens DSM 19672 10008462 YP_004050532.1 CDS Calni_0456 NC_014758.1 464120 465496 D COGs: COG2195 Di- and tripeptidase; InterPro IPR002933: IPR011650: IPR001160; KEGG: bvu:BVU_2372 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20; PRIAM: Xaa-His dipeptidase; SPTR: Aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: Peptidase family M20/M25/M40; TIGRFAM: aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase 464120..465496 Calditerrivibrio nitroreducens DSM 19672 10008463 YP_004050533.1 CDS Calni_0457 NC_014758.1 465516 467504 D COGs: COG4651 Kef-type K+ transport system predicted NAD-binding component; InterPro IPR003148: IPR006037: IPR006153; KEGG: tye:THEYE_A1050 sodium/hydrogen exchanger family/TrkA domain protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; SPTR: Sodium/hydrogen exchanger family/TrkA domain protein; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; sodium/hydrogen exchanger 465516..467504 Calditerrivibrio nitroreducens DSM 19672 10008464 YP_004050534.1 CDS Calni_0458 NC_014758.1 467587 468540 D COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: ddf:DEFDS_1508 ABC transporter substrate-binding protein; PFAM: protein of unknown function DUF534; SPTR: ABC transporter, substrate-binding protein; PFAM: ABC transporter substrate binding protein; hypothetical protein 467587..468540 Calditerrivibrio nitroreducens DSM 19672 10008465 YP_004050535.1 CDS Calni_0459 NC_014758.1 468619 469512 D COGs: COG4120 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: ddf:DEFDS_1507 ABC transporter permease; PFAM: inner-membrane translocator; SPTR: ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 468619..469512 Calditerrivibrio nitroreducens DSM 19672 10008466 YP_004050536.1 CDS Calni_0460 NC_014758.1 469509 470303 D COGs: COG1101 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: ddf:DEFDS_1506 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter 469509..470303 Calditerrivibrio nitroreducens DSM 19672 10008467 YP_004050537.1 CDS Calni_0461 NC_014758.1 470311 473667 D COGs: COG1196 Chromosome segregation ATPase; InterPro IPR003395: IPR011890; KEGG: ddf:DEFDS_1341 chromosome segregation protein SMC; PFAM: SMC domain protein; SPTR: Chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type; chromosome segregation protein smc 470311..473667 Calditerrivibrio nitroreducens DSM 19672 10008468 YP_004050538.1 CDS Calni_0462 NC_014758.1 473718 475943 R COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: cte:CT0351 isocitrate dehydrogenase, NADP-dependent, monomeric type; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; isocitrate dehydrogenase, nADP-dependent complement(473718..475943) Calditerrivibrio nitroreducens DSM 19672 10008469 YP_004050539.1 CDS Calni_0463 NC_014758.1 476543 477517 D COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001236: IPR011275: IPR001557; KEGG: ddf:DEFDS_0919 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; malate dehydrogenase (nad) 476543..477517 Calditerrivibrio nitroreducens DSM 19672 10008470 YP_004050540.1 CDS Calni_0464 NC_014758.1 477638 477841 D InterPro IPR017896: IPR017900; KEGG: ddf:DEFDS_0922 2-oxoglutarate ferredoxin oxidoreductase subunit delta; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S binding domain; 2-oxoglutarate ferredoxin oxidoreductase subunit delta 477638..477841 Calditerrivibrio nitroreducens DSM 19672 10008471 YP_004050541.1 CDS Calni_0465 NC_014758.1 477857 478993 D COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: ddf:DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; PFAM: domain; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 477857..478993 Calditerrivibrio nitroreducens DSM 19672 10008472 YP_004050542.1 CDS Calni_0466 NC_014758.1 478994 479803 D COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: ddf:DEFDS_0924 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 478994..479803 Calditerrivibrio nitroreducens DSM 19672 10008473 YP_004050543.1 CDS Calni_0467 NC_014758.1 479813 480355 D COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: ddf:DEFDS_0925 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 479813..480355 Calditerrivibrio nitroreducens DSM 19672 10008474 YP_004050544.1 CDS Calni_0468 NC_014758.1 480401 480994 R KEGG: ddf:DEFDS_2118 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(480401..480994) Calditerrivibrio nitroreducens DSM 19672 10008475 YP_004050545.1 CDS Calni_0469 NC_014758.1 481176 483734 D COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR001412: IPR015413: IPR013155: IPR002302; KEGG: ddf:DEFDS_0790 leucyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; tRNA synthetase class I (M); SPTR: Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 481176..483734 Calditerrivibrio nitroreducens DSM 19672 10008476 YP_004050546.1 CDS Calni_0470 NC_014758.1 483774 484268 D KEGG: ddf:DEFDS_0791 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 483774..484268 Calditerrivibrio nitroreducens DSM 19672 10008477 YP_004050547.1 CDS Calni_0471 NC_014758.1 484243 485154 D COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: ddf:DEFDS_0792 hypothetical protein; PFAM: DNA polymerase III delta; SPTR: uncharacterized protein; PFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 484243..485154 Calditerrivibrio nitroreducens DSM 19672 10008478 YP_004050548.1 CDS Calni_0472 NC_014758.1 485313 486290 D COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: ddf:DEFDS_0202 peptidase M23/M37 family; PFAM: Peptidase M23; SPTR: Peptidase, M23/M37 family; PFAM: Peptidase family M23; peptidase m23 485313..486290 Calditerrivibrio nitroreducens DSM 19672 10008479 YP_004050549.1 CDS Calni_0473 NC_014758.1 486256 487407 R InterPro IPR000064; KEGG: hth:HTH_1474 hypothetical protein; PFAM: NLP/P60 protein; SPTR: uncharacterized protein; PFAM: NlpC/P60 family; nlp/p60 protein complement(486256..487407) Calditerrivibrio nitroreducens DSM 19672 10008480 YP_004050550.1 CDS Calni_0474 NC_014758.1 487467 488537 D COGs: COG0628 permease; InterPro IPR002549; KEGG: dap:Dacet_2389 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: uncharacterized protein; PFAM: Domain of unknown function DUF20; hypothetical protein 487467..488537 Calditerrivibrio nitroreducens DSM 19672 10008481 YP_004050551.1 CDS Calni_0475 NC_014758.1 488557 489480 D COGs: COG0196 FAD synthase; InterPro IPR015864: IPR015865: IPR002606; KEGG: ddf:DEFDS_1953 riboflavin biosynthesis regulatory protein RibF; PFAM: FAD synthetase; Riboflavin kinase; SPTR: Riboflavin biosynthesis regulatory protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; riboflavin biosynthesis protein ribf 488557..489480 Calditerrivibrio nitroreducens DSM 19672 10008482 YP_004050552.1 CDS Calni_0476 NC_014758.1 489477 490778 D COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR013848: IPR020612: IPR007197: IPR006638: IPR 005840: IPR005839; KEGG: dap:Dacet_2381 MiaB-like tRNA modifying enzyme YliG; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family; 30S ribosomal protein S12p methylthiotransferase 489477..490778 Calditerrivibrio nitroreducens DSM 19672 10008483 YP_004050553.1 CDS Calni_0477 NC_014758.1 490796 491560 D COGs: COG4105 DNA uptake lipoprotein; InterPro IPR019734: IPR013026: IPR001440: IPR017689; KEGG: dap:Dacet_2380 outer membrane assembly lipoprotein YfiO; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO; PFAM: Tetratricopeptide repeat; TIGRFAM: outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein yfio 490796..491560 Calditerrivibrio nitroreducens DSM 19672 10008484 YP_004050554.1 CDS Calni_0478 NC_014758.1 491575 492840 D COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR006195: IPR015866: IPR002314: IPR018156: IPR 002317; KEGG: ddf:DEFDS_1957 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 491575..492840 Calditerrivibrio nitroreducens DSM 19672 10008485 YP_004050555.1 CDS Calni_0479 NC_014758.1 492842 493513 D COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: dap:Dacet_2378 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase 492842..493513 Calditerrivibrio nitroreducens DSM 19672 10008486 YP_004050556.1 CDS Calni_0480 NC_014758.1 493796 495709 D COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595: IPR000644: IPR002114: IPR005105: IPR 018821; KEGG: tye:THEYE_A0033 nucleotidyltransferase family; PFAM: protein of unknown function DUF294 nucleotidyltransferase; CBS domain containing protein; cyclic nucleotide-binding; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; SMART: cyclic nucleotide-binding; CBS domain containing protein; SPTR: nucleotidyltransferase family; PFAM: CBS domain; nucleotidyltransferase substrate binding domain; Cyclic nucleotide-binding domain; nucleotidyltransferase DUF294; nucleotidyltransferase 493796..495709 Calditerrivibrio nitroreducens DSM 19672 10008487 YP_004050557.1 CDS Calni_0481 NC_014758.1 495759 496019 D COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: ddf:DEFDS_1575 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: solute symporter protein; TIGRFAM: probable solute:sodium symporter small subunit; solute symporter protein 495759..496019 Calditerrivibrio nitroreducens DSM 19672 10008488 YP_004050558.1 CDS Calni_0482 NC_014758.1 496032 497846 D COGs: COG4147 symporter; InterPro IPR001734: IPR018212: IPR019899; KEGG: afw:Anae109_3832 symporter; PFAM: Na+/solute symporter; SPTR: Symporter; TIGRFAM: sodium symporter protein; PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; transporter, SSS family; sodium symporter protein 496032..497846 Calditerrivibrio nitroreducens DSM 19672 10008489 YP_004050559.1 CDS Calni_0483 NC_014758.1 497906 498298 D KEGG: dka:DKAM_0509 flagellar protein J - like protein; SPTR: uncharacterized protein; hypothetical protein 497906..498298 Calditerrivibrio nitroreducens DSM 19672 10008490 YP_004050560.1 CDS Calni_0484 NC_014758.1 498689 500383 D COGs: COG3303 Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit; InterPro IPR011031; KEGG: gem:GM21_1277 nitrite reductase (cytochrome; ammonia-forming); SPTR: Cytochrome c family protein; PFAM: Cytochrome c552; nitrite reductase 498689..500383 Calditerrivibrio nitroreducens DSM 19672 10008491 YP_004050561.1 CDS Calni_0485 NC_014758.1 500551 501906 D COGs: COG1333 ResB protein required for cytochrome c biosynthesis; KEGG: tye:THEYE_A1060 hypothetical protein; SPTR: uncharacterized protein; PFAM: ResB-like family; hypothetical protein 500551..501906 Calditerrivibrio nitroreducens DSM 19672 10008492 YP_004050562.1 CDS Calni_0486 NC_014758.1 501934 503004 D COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541: IPR017562; KEGG: tye:THEYE_A1061 cytochrome c biogenesis protein, CcmF/CcyK/CcsA family; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c biogenesis protein, CcmF/CcyK/CcsA family; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; cytochrome c-type biogenesis protein ccsb 501934..503004 Calditerrivibrio nitroreducens DSM 19672 10008493 YP_004050563.1 CDS Calni_0487 NC_014758.1 503260 504402 D COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: ddf:DEFDS_1626 multidrug-efflux transporter MFS family; PFAM: major facilitator superfamily MFS_1; SPTR: Multidrug-efflux transporter, MFS family; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 503260..504402 Calditerrivibrio nitroreducens DSM 19672 10008495 YP_004050564.1 CDS Calni_0488 NC_014758.1 504383 505504 R COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR007197: IPR010722: IPR012726; KEGG: ddf:DEFDS_0221 thiamine biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SPTR: Thiamine biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH; tyrosine lyase thih complement(504383..505504) Calditerrivibrio nitroreducens DSM 19672 10008496 YP_004050565.1 CDS Calni_0489 NC_014758.1 505506 506282 R COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; InterPro IPR008867; KEGG: ddf:DEFDS_0220 thiamine biosynthesis protein ThiG; PFAM: thiazole biosynthesis family protein; SPTR: Thiazole synthase; PFAM: Thiazole biosynthesis protein ThiG; thiazole-phosphate synthase complement(505506..506282) Calditerrivibrio nitroreducens DSM 19672 10008497 YP_004050566.1 CDS Calni_0490 NC_014758.1 506474 508114 R COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891: IPR002034: IPR013709: IPR005671; KEGG: ddf:DEFDS_1662 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase complement(506474..508114) Calditerrivibrio nitroreducens DSM 19672 10008498 YP_004050567.1 CDS Calni_0491 NC_014758.1 508111 508851 R COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462: IPR004533; KEGG: ddf:DEFDS_1663 CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; cdp-diacylglycerol--serine o-phosphatidyltransferase complement(508111..508851) Calditerrivibrio nitroreducens DSM 19672 10008499 YP_004050568.1 CDS Calni_0492 NC_014758.1 508851 509480 R COGs: COG0688 Phosphatidylserine decarboxylase; InterPro IPR003817: IPR004428; KEGG: ddf:DEFDS_1664 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein; phosphatidylserine decarboxylase complement(508851..509480) Calditerrivibrio nitroreducens DSM 19672 10008500 YP_004050569.1 CDS Calni_0493 NC_014758.1 509567 510235 R COGs: COG1489 DNA-binding protein stimulates sugar fermentation; InterPro IPR005224; KEGG: ddf:DEFDS_1600 sugar fermentation stimulation protein A; PFAM: sugar fermentation stimulation protein; SPTR: Sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein complement(509567..510235) Calditerrivibrio nitroreducens DSM 19672 10008501 YP_004050570.1 CDS Calni_0494 NC_014758.1 510250 510984 D COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR000189: IPR008258; KEGG: ddf:DEFDS_1602 hypothetical protein; PFAM: Lytic transglycosylase catalytic; SPTR: uncharacterized protein; PFAM: Transglycosylase SLT domain; lytic transglycosylase 510250..510984 Calditerrivibrio nitroreducens DSM 19672 10008502 YP_004050571.1 CDS Calni_0495 NC_014758.1 511026 514460 R COGs: COG1038 Pyruvate carboxylase; InterPro IPR000089: IPR011761: IPR011764: IPR000891: IPR 005479: IPR005481: IPR005482: IPR003379: IPR005930; KEGG: ddf:DEFDS_1275 pyruvate carboxylase; PFAM: Conserved carboxylase region; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; biotin/lipoyl attachment domain-containing protein; SPTR: Pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; HMGL-like; Carbamoyl-phosphate synthase L chain, N-terminal domain; Conserved carboxylase domain; Biotin-requiring enzyme; TIGRFAM: pyruvate carboxylase; pyruvate carboxylase complement(511026..514460) Calditerrivibrio nitroreducens DSM 19672 10008503 YP_004050572.1 CDS Calni_0496 NC_014758.1 514797 516449 R COGs: COG1151 6Fe-6S prismane cluster-containing protein; InterPro IPR004137: IPR010048; KEGG: ddf:DEFDS_0776 hydroxylamine reductase; PFAM: Prismane; SPTR: Hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase; hybrid cluster protein complement(514797..516449) Calditerrivibrio nitroreducens DSM 19672 10008504 YP_004050573.1 CDS Calni_0497 NC_014758.1 516543 517193 D COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR012318: IPR001808; KEGG: ddf:DEFDS_1546 CRP/FNR family transcriptional regulator, anaerobic regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: CRP/FNR family transcriptional regulator, anaerobic regulatory protein; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; Crp/FNR family transcriptional regulator 516543..517193 Calditerrivibrio nitroreducens DSM 19672 10008505 YP_004050574.1 CDS Calni_0498 NC_014758.1 517371 517994 D KEGG: xla:100037153 nuclear fragile X mental retardation protein interacting protein 2; SPTR: Transposase, IS4 family protein; hypothetical protein 517371..517994 Calditerrivibrio nitroreducens DSM 19672 10008506 YP_004050575.1 CDS Calni_0499 NC_014758.1 518056 518682 D InterPro IPR002559; KEGG: lcr:LCRIS_00616 polynucleotidyl transferase, ribonuclease H fold; PFAM: transposase IS4 family protein; SPTR: uncharacterized protein; transposase is4 family protein 518056..518682 Calditerrivibrio nitroreducens DSM 19672 10008507 YP_004050576.1 CDS Calni_0500 NC_014758.1 518793 520598 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089: IPR003660; KEGG: ddf:DEFDS_0797 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 518793..520598 Calditerrivibrio nitroreducens DSM 19672 10008508 YP_004050577.1 CDS Calni_0501 NC_014758.1 520732 522858 D COGs: COG2217 Cation transport ATPase; InterPro IPR006121: IPR018303: IPR017969: IPR008250: IPR 005834: IPR001757: IPR001756: IPR001877: IPR006403: IPR006416; KEGG: cth:Cthe_1848 copper-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating p-type atpase 520732..522858 Calditerrivibrio nitroreducens DSM 19672 10008509 YP_004050578.1 CDS Calni_0502 NC_014758.1 522874 523080 D InterPro IPR006121: IPR017969: IPR000428: IPR006122; KEGG: cob:COB47_2045 heavy metal translocating P-type ATPase; PFAM: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein; TIGRFAM: copper ion binding protein; PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein; copper ion binding protein 522874..523080 Calditerrivibrio nitroreducens DSM 19672 10008510 YP_004050579.1 CDS Calni_0503 NC_014758.1 523234 526044 D InterPro IPR016160; KEGG: mru:mru_1210 adhesin-like protein; SPTR: Hemolysin; hypothetical protein 523234..526044 Calditerrivibrio nitroreducens DSM 19672 10008511 YP_004050580.1 CDS Calni_0504 NC_014758.1 526167 527549 R KEGG: dba:Dbac_2226 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(526167..527549) Calditerrivibrio nitroreducens DSM 19672 10008512 YP_004050581.1 CDS Calni_0505 NC_014758.1 527552 530281 R COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000595: IPR000731: IPR018488: IPR003392: IPR 002373; KEGG: dal:Dalk_4262 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; Patched family protein; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: MMPL family; Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein complement(527552..530281) Calditerrivibrio nitroreducens DSM 19672 10008513 YP_004050582.1 CDS Calni_0506 NC_014758.1 530289 531089 R KEGG: tde:TDE2009 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1329); hypothetical protein complement(530289..531089) Calditerrivibrio nitroreducens DSM 19672 10008514 YP_004050583.1 CDS Calni_0507 NC_014758.1 531209 531787 R COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR006543: IPR006549; KEGG: ddf:DEFDS_0138 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain; histidinol-phosphate phosphatase family protein complement(531209..531787) Calditerrivibrio nitroreducens DSM 19672 10008515 YP_004050584.1 CDS Calni_0508 NC_014758.1 531762 532643 R COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: ddf:DEFDS_0137 lipid A biosynthesis lauroyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; lipid a biosynthesis acyltransferase complement(531762..532643) Calditerrivibrio nitroreducens DSM 19672 10008516 YP_004050585.1 CDS Calni_0509 NC_014758.1 532630 533847 R COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: ddf:DEFDS_0136 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); three-deoxy-d-manno-octulosonic-acid transferase domain-containing protein complement(532630..533847) Calditerrivibrio nitroreducens DSM 19672 10008517 YP_004050586.1 CDS Calni_0510 NC_014758.1 533828 534460 R COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: ddf:DEFDS_0135 hypothetical protein; PFAM: protein of unknown function DUF374; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF374); hypothetical protein complement(533828..534460) Calditerrivibrio nitroreducens DSM 19672 10008518 YP_004050587.1 CDS Calni_0511 NC_014758.1 534460 535554 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: ddf:DEFDS_0134 aminotransferase DegT/DnrJ/EryC1/StrS family; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Aminotransferase, DegT/DnrJ/EryC1/StrS family; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; degt/dnrj/eryc1/strs aminotransferase complement(534460..535554) Calditerrivibrio nitroreducens DSM 19672 10008519 YP_004050588.1 CDS Calni_0512 NC_014758.1 535647 537476 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR005467: IPR003661: IPR003594: IPR004358; KEGG: ddf:DEFDS_1377 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; integral membrane sensor signal transduction histidine kinase complement(535647..537476) Calditerrivibrio nitroreducens DSM 19672 10008520 YP_004050589.1 CDS Calni_0513 NC_014758.1 537526 538128 R COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: ddf:DEFDS_1017 molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: Probable molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein a complement(537526..538128) Calditerrivibrio nitroreducens DSM 19672 10008521 YP_004050590.1 CDS Calni_0514 NC_014758.1 538166 539419 R COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183: IPR002986; KEGG: mac:MA0726 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(538166..539419) Calditerrivibrio nitroreducens DSM 19672 10008522 YP_004050591.1 CDS Calni_0515 NC_014758.1 539620 540054 D COGs: COG0360 Ribosomal protein S6; InterPro IPR020814: IPR000529; KEGG: ddf:DEFDS_1987 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 539620..540054 Calditerrivibrio nitroreducens DSM 19672 10008523 YP_004050592.1 CDS Calni_0516 NC_014758.1 540070 540474 D COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: ddf:DEFDS_1988 single-strand DNA binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single-strand binding protein 540070..540474 Calditerrivibrio nitroreducens DSM 19672 10008524 YP_004050593.1 CDS Calni_0517 NC_014758.1 540485 540715 D COGs: COG0238 Ribosomal protein S18; InterPro IPR018275: IPR001648; KEGG: dap:Dacet_0006 30S ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 540485..540715 Calditerrivibrio nitroreducens DSM 19672 10008525 YP_004050594.1 CDS Calni_0518 NC_014758.1 540751 541644 D InterPro IPR018710; KEGG: ddf:DEFDS_1990 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: uncharacterized protein; PFAM: Predicted membrane protein (DUF2232); hypothetical protein 540751..541644 Calditerrivibrio nitroreducens DSM 19672 10008526 YP_004050595.1 CDS Calni_0519 NC_014758.1 541628 542551 D COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: ddf:DEFDS_1992 cation efflux protein; PFAM: cation efflux protein; SPTR: Cation efflux protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 541628..542551 Calditerrivibrio nitroreducens DSM 19672 10008527 YP_004050596.1 CDS Calni_0520 NC_014758.1 542634 543131 D InterPro IPR000644; KEGG: dol:Dole_2123 CBS domain-containing protein; PFAM: CBS domain containing protein; SPTR: CBS domain containing membrane protein; PFAM: CBS domain; CBS domain-containing protein 542634..543131 Calditerrivibrio nitroreducens DSM 19672 10008528 YP_004050597.1 CDS Calni_0521 NC_014758.1 543100 544452 D COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680: IPR000802; KEGG: dma:DMR_06440 arsenical pump membrane protein; PFAM: Citrate transporter; SPTR: Arsenical pump membrane protein; PFAM: Citrate transporter; TC 2.A.45.2.1; tyrosine transporter p-protein 543100..544452 Calditerrivibrio nitroreducens DSM 19672 10008529 YP_004050598.1 CDS Calni_0522 NC_014758.1 544728 546041 D InterPro IPR002559; KEGG: sso:SSO1775 transposase ISC1359; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4 family protein; PFAM: Transposase DDE domain; transposase is4 family protein 544728..546041 Calditerrivibrio nitroreducens DSM 19672 10008530 YP_004050599.1 CDS Calni_0523 NC_014758.1 546143 547360 R COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: swo:Swol_0155 hypothetical protein; PFAM: transposase mutator type; SPTR: uncharacterized protein; PFAM: Transposase, Mutator family; transposase mutator type complement(546143..547360) Calditerrivibrio nitroreducens DSM 19672 10008531 YP_004050600.1 CDS Calni_0524 NC_014758.1 547495 547962 D COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: dak:DaAHT2_2517 cation antiporter; PFAM: cation antiporter; SPTR: DNA topoisomerase IV subunit A; PFAM: Na+/H+ ion antiporter subunit; cation antiporter 547495..547962 Calditerrivibrio nitroreducens DSM 19672 10008532 YP_004050601.1 CDS Calni_0525 NC_014758.1 547953 548216 D InterPro IPR007208; KEGG: fpl:Ferp_0723 multiple resistance and pH regulation protein F; PFAM: multiple resistance and pH regulation protein F; SPTR: Multiple resistance and pH regulation protein F; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); TC 2.A.63.1; multisubunit sodium/proton antiporter, mrpf subunit 547953..548216 Calditerrivibrio nitroreducens DSM 19672 10008533 YP_004050602.1 CDS Calni_0526 NC_014758.1 548213 548521 D COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: fpl:Ferp_0722 monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; SPTR: Monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; monovalent cation/proton antiporter, mnhg/phag subunit 548213..548521 Calditerrivibrio nitroreducens DSM 19672 10008534 YP_004050603.1 CDS Calni_0527 NC_014758.1 548505 549035 D KEGG: pla:Plav_2970 multicomponent Na+-H+ antiporter subunit A; SPTR: multicomponent Na+-H+ antiporter subunit A; multicomponent na+-h+ antiporter subunit a 548505..549035 Calditerrivibrio nitroreducens DSM 19672 10008535 YP_004050604.1 CDS Calni_0528 NC_014758.1 549032 549451 D InterPro IPR007182; KEGG: swp:swp_0938 monovalent cation/H+ antiporter subunit B; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: Na+/H+ antiporter MnhB subunit-related protein; PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; na+/h+ antiporter mnhb subunit-like protein 549032..549451 Calditerrivibrio nitroreducens DSM 19672 10008536 YP_004050605.1 CDS Calni_0529 NC_014758.1 549444 549839 D COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: spl:Spea_3283 NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; TC 2.A.63.1; multisubunit sodium/proton antiporter, mrpc subunit 549444..549839 Calditerrivibrio nitroreducens DSM 19672 10008537 YP_004050606.1 CDS Calni_0530 NC_014758.1 549829 551322 D COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750: IPR003918; KEGG: rba:RB1431 monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH dehydrogenase/oxidoreductase; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; NADH/ubiquinone/plastoquinone (complex i) 549829..551322 Calditerrivibrio nitroreducens DSM 19672 10008538 YP_004050607.1 CDS Calni_0531 NC_014758.1 551319 552800 D COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001750: IPR003916; KEGG: dat:HRM2_35350 MnhA2; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH-ubiquinone/plastoquinone (Complex I), subunit; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TC 2.A.63.1; multisubunit sodium/proton antiporter, mrpd subunit 551319..552800 Calditerrivibrio nitroreducens DSM 19672 10008539 YP_004050608.1 CDS Calni_0532 NC_014758.1 552797 553060 D KEGG: kko:Kkor_0771 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 552797..553060 Calditerrivibrio nitroreducens DSM 19672 10008540 YP_004050609.1 CDS Calni_0533 NC_014758.1 553050 554831 D COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: dal:Dalk_4926 monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: monovalent cation/H+ antiporter subunit D; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TC 2.A.63.1; multisubunit sodium/proton antiporter, mrpd subunit 553050..554831 Calditerrivibrio nitroreducens DSM 19672 10008541 YP_004050610.1 CDS Calni_0534 NC_014758.1 554821 556818 R COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: dap:Dacet_3002 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase complement(554821..556818) Calditerrivibrio nitroreducens DSM 19672 10008542 YP_004050611.1 CDS Calni_0535 NC_014758.1 556811 558325 R COGs: COG0248 Exopolyphosphatase; InterPro IPR003695: IPR006674; KEGG: dap:Dacet_3001 exopolyphosphatase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain; Ppx/GppA phosphatase; SPTR: Exopolyphosphatase-like protein; PFAM: HD domain; Ppx/GppA phosphatase family; ppx/gppa phosphatase complement(556811..558325) Calditerrivibrio nitroreducens DSM 19672 10008543 YP_004050612.1 CDS Calni_0536 NC_014758.1 558322 559848 R COGs: COG0248 Exopolyphosphatase; InterPro IPR003695: IPR006674: IPR003607; KEGG: dap:Dacet_3000 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Ppx/GppA phosphatase; PFAM: HD domain; Ppx/GppA phosphatase family; ppx/gppa phosphatase complement(558322..559848) Calditerrivibrio nitroreducens DSM 19672 10008544 YP_004050613.1 CDS Calni_0537 NC_014758.1 559901 560551 R InterPro IPR001623: IPR013026: IPR019734; KEGG: ddf:DEFDS_1649 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; Tetratricopeptide repeat; SPTR: uncharacterized protein; PFAM: DnaJ domain; heat shock protein dnaj domain-containing protein complement(559901..560551) Calditerrivibrio nitroreducens DSM 19672 10008545 YP_004050614.1 CDS Calni_0538 NC_014758.1 560756 561730 D COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: ddf:DEFDS_1847 TRAP-type transporter substrate-binding protein; SPTR: TRAP-type transport system, substrate-binding protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; trap transporter solute receptor, taxi family 560756..561730 Calditerrivibrio nitroreducens DSM 19672 10008546 YP_004050615.1 CDS Calni_0539 NC_014758.1 561796 563853 D COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR010656: IPR011853; KEGG: ddf:DEFDS_1846 TRAP-type transporter permease component; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP-type transport system, permease component; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; trap transporter 561796..563853 Calditerrivibrio nitroreducens DSM 19672 10008547 YP_004050616.1 CDS Calni_0540 NC_014758.1 563892 564782 R COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: ddf:DEFDS_1259 patatin-like phospholipase family protein; PFAM: Patatin; SPTR: Patatin-like phospholipase family protein; PFAM: Patatin-like phospholipase; patatin complement(563892..564782) Calditerrivibrio nitroreducens DSM 19672 10008548 YP_004050617.1 CDS Calni_0541 NC_014758.1 564791 565900 R InterPro IPR000412: IPR013525; KEGG: ddf:DEFDS_1590 multidrug ABC transporter permease; PFAM: ABC-2 type transporter; SPTR: Multidrug ABC transporter, permease; PFAM: ABC-2 type transporter; ABC-2 type transporter complement(564791..565900) Calditerrivibrio nitroreducens DSM 19672 10008549 YP_004050618.1 CDS Calni_0542 NC_014758.1 565894 567012 R InterPro IPR000412: IPR013525; KEGG: ddf:DEFDS_1589 multidrug ABC transporter permease; PFAM: ABC-2 type transporter; SPTR: Multidrug ABC transporter, permease; PFAM: ABC-2 type transporter; ABC-2 type transporter complement(565894..567012) Calditerrivibrio nitroreducens DSM 19672 10008550 YP_004050619.1 CDS Calni_0543 NC_014758.1 566999 568792 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: ddf:DEFDS_1588 multidrug ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Multidrug ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter complement(566999..568792) Calditerrivibrio nitroreducens DSM 19672 10008551 YP_004050620.1 CDS Calni_0544 NC_014758.1 568789 569946 R COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR003997; KEGG: ddf:DEFDS_1587 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(568789..569946) Calditerrivibrio nitroreducens DSM 19672 10008552 YP_004050621.1 CDS Calni_0545 NC_014758.1 569978 570790 R InterPro IPR007899; KEGG: dap:Dacet_2998 CHAD domain containing protein; PFAM: CHAD domain containing protein; SPTR: CHAD; PFAM: CHAD domain; chad domain-containing protein complement(569978..570790) Calditerrivibrio nitroreducens DSM 19672 10008553 YP_004050622.1 CDS Calni_0546 NC_014758.1 570787 571245 R COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: dap:Dacet_2997 phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; SPTR: phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA; phosphohistidine phosphatase, sixa complement(570787..571245) Calditerrivibrio nitroreducens DSM 19672 10008554 YP_004050623.1 CDS Calni_0547 NC_014758.1 571308 572642 R COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: son:SO_2295 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Probable multidrug resistance protein norM; TIGRFAM: MATE efflux family protein; manually curated; PFAM: MatE; TIGRFAM: efflux protein, MATE family; mate efflux family protein complement(571308..572642) Calditerrivibrio nitroreducens DSM 19672 10008555 YP_004050624.1 CDS Calni_0548 NC_014758.1 572792 573379 D COGs: COG0693 intracellular protease/amidase; InterPro IPR006286: IPR002818; KEGG: ddf:DEFDS_2037 intracellular protease PfpI family; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; intracellular protease, pfpi family 572792..573379 Calditerrivibrio nitroreducens DSM 19672 10008556 YP_004050625.1 CDS Calni_0549 NC_014758.1 573415 574104 R COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: ddf:DEFDS_0849 hypothetical protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: uncharacterized protein; PFAM: Cyclic nucleotide-binding domain; Crp/FNR family transcriptional regulator complement(573415..574104) Calditerrivibrio nitroreducens DSM 19672 10008557 YP_004050626.1 CDS Calni_0550 NC_014758.1 574129 575994 R COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: ddf:DEFDS_2034 hypothetical protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: uncharacterized protein; PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488); transglutaminase domain-containing protein complement(574129..575994) Calditerrivibrio nitroreducens DSM 19672 10008558 YP_004050627.1 CDS Calni_0551 NC_014758.1 575984 576853 R COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: ddf:DEFDS_2035 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF58; hypothetical protein complement(575984..576853) Calditerrivibrio nitroreducens DSM 19672 10008559 YP_004050628.1 CDS Calni_0552 NC_014758.1 576870 577805 R COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR003593: IPR016366; KEGG: ddf:DEFDS_2036 ATPase AAA family; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: ATPase, AAA family; PFAM: ATPase family associated with various cellular activities (AAA); atpase associated with various cellular activities aaa_3 complement(576870..577805) Calditerrivibrio nitroreducens DSM 19672 10008560 YP_004050629.1 CDS Calni_0553 NC_014758.1 577885 579261 D COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027: IPR000103; KEGG: dap:Dacet_2753 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; fad-dependent pyridine nucleotide-disulfide oxidoreductase 577885..579261 Calditerrivibrio nitroreducens DSM 19672 10008561 YP_004050630.1 CDS Calni_0554 NC_014758.1 579274 579735 D COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: dap:Dacet_2487 hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; SPTR: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; hydrogenase maturation protease 579274..579735 Calditerrivibrio nitroreducens DSM 19672 10008562 YP_004050631.1 CDS Calni_0555 NC_014758.1 579741 581285 R COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845: IPR000873; KEGG: ddf:DEFDS_0642 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Long-chain fatty-acid-CoA ligase; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase complement(579741..581285) Calditerrivibrio nitroreducens DSM 19672 10008563 YP_004050632.1 CDS Calni_0556 NC_014758.1 581275 581871 R COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: ddf:DEFDS_0643 septum formation protein; PFAM: Maf family protein; SPTR: Maf-like protein DEFDS_0643; TIGRFAM: maf protein; PFAM: Maf-like protein; TIGRFAM: MAF protein; maf protein complement(581275..581871) Calditerrivibrio nitroreducens DSM 19672 10008564 YP_004050633.1 CDS Calni_0557 NC_014758.1 581874 582368 R InterPro IPR010898; KEGG: ddf:DEFDS_0644 hypothetical protein; PFAM: Heptaprenyl diphosphate synthase component I; SPTR: uncharacterized protein; PFAM: Heptaprenyl diphosphate synthase component I; heptaprenyl diphosphate synthase component i complement(581874..582368) Calditerrivibrio nitroreducens DSM 19672 10008565 YP_004050634.1 CDS Calni_0558 NC_014758.1 582352 582744 R COGs: COG5341 conserved hypothetical protein; InterPro IPR010739; KEGG: ddf:DEFDS_0645 hypothetical protein; PFAM: protein of unknown function DUF1312; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1312); hypothetical protein complement(582352..582744) Calditerrivibrio nitroreducens DSM 19672 10008566 YP_004050635.1 CDS Calni_0559 NC_014758.1 582695 583633 R COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: ddf:DEFDS_0646 thiamine biosynthesis lipoprotein ApbE; PFAM: ApbE family lipoprotein; SPTR: Thiamine biosynthesis lipoprotein ApbE; PFAM: ApbE family; apbe family lipoprotein complement(582695..583633) Calditerrivibrio nitroreducens DSM 19672 10008567 YP_004050636.1 CDS Calni_0560 NC_014758.1 583603 584577 R COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197: IPR016431; KEGG: ddf:DEFDS_0647 pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM domain protein; SPTR: Pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(583603..584577) Calditerrivibrio nitroreducens DSM 19672 10008568 YP_004050637.1 CDS Calni_0561 NC_014758.1 584574 585545 R COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: ddf:DEFDS_0648 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: Octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(584574..585545) Calditerrivibrio nitroreducens DSM 19672 10008569 YP_004050638.1 CDS Calni_0562 NC_014758.1 585653 586339 D KEGG: ddf:DEFDS_0649 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 585653..586339 Calditerrivibrio nitroreducens DSM 19672 10008570 YP_004050639.1 CDS Calni_0563 NC_014758.1 586370 586747 D COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR019897: IPR006175: IPR006056; KEGG: ddf:DEFDS_0650 translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: Translation initiation inhibitor; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease l-psp 586370..586747 Calditerrivibrio nitroreducens DSM 19672 10008571 YP_004050640.1 CDS Calni_0564 NC_014758.1 586893 588437 D COGs: COG4799 acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR011762: IPR011763: IPR000022; KEGG: ddf:DEFDS_1228 propionyl-CoA carboxylase subunit beta; PFAM: carboxyl transferase; SPTR: Propionyl-CoA carboxylase, beta subunit; PFAM: Carboxyl transferase domain; propionyl-CoA carboxylase carboxyltransferase subunit 586893..588437 Calditerrivibrio nitroreducens DSM 19672 10008572 YP_004050641.1 CDS Calni_0565 NC_014758.1 588455 589972 D COGs: COG4770 acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR011761: IPR011764: IPR005479: IPR005481: IPR 005482; KEGG: ddf:DEFDS_1227 propionyl-CoA carboxylase subunit alpha; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: Propionyl-CoA carboxylase, alpha subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; biotin carboxylase 588455..589972 Calditerrivibrio nitroreducens DSM 19672 10008573 YP_004050642.1 CDS Calni_0566 NC_014758.1 589985 590518 D COGs: COG4770 acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089: IPR001882; KEGG: ddf:DEFDS_1226 biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; biotin carboxyl carrier protein 589985..590518 Calditerrivibrio nitroreducens DSM 19672 10008574 YP_004050643.1 CDS Calni_0567 NC_014758.1 590565 592715 D COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006158: IPR006099: IPR006098: IPR006159; KEGG: dap:Dacet_1930 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; methylmalonyl-CoA mutase 590565..592715 Calditerrivibrio nitroreducens DSM 19672 10008575 YP_004050644.1 CDS Calni_0568 NC_014758.1 592712 593692 D COGs: COG1703 periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129: IPR003593; KEGG: dap:Dacet_1929 LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; SPTR: LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; methylmalonyl-CoA mutase metallochaperone meab 592712..593692 Calditerrivibrio nitroreducens DSM 19672 10008576 YP_004050645.1 CDS Calni_0569 NC_014758.1 593907 595310 R COGs: COG0499 S-adenosylhomocysteine hydrolase; InterPro IPR020082: IPR000043: IPR015878; KEGG: dap:Dacet_1441 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; PRIAM: Adenosylhomocysteinase; SPTR: Adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; adenosylhomocysteinase complement(593907..595310) Calditerrivibrio nitroreducens DSM 19672 10008577 YP_004050646.1 CDS Calni_0570 NC_014758.1 595465 596052 D COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: tye:THEYE_A0116 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 595465..596052 Calditerrivibrio nitroreducens DSM 19672 10008578 YP_004050647.1 CDS Calni_0571 NC_014758.1 596065 597291 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: sfu:Sfum_3680 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: Secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter, rnd family, mfp subunit 596065..597291 Calditerrivibrio nitroreducens DSM 19672 10008579 YP_004050648.1 CDS Calni_0572 NC_014758.1 597300 600476 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036: IPR004764; KEGG: sfu:Sfum_3679 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavine resistance protein B; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux-1 family transporter 597300..600476 Calditerrivibrio nitroreducens DSM 19672 10008580 YP_004050649.1 CDS Calni_0573 NC_014758.1 600473 601894 D COGs: COG1538 Outer membrane protein; InterPro IPR003423: IPR010131; KEGG: tye:THEYE_A1620 outer membrane protein OprM; PFAM: outer membrane efflux protein; SPTR: Outer membrane protein OprM; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; rnd efflux system, outer membrane lipoprotein, nodt family 600473..601894 Calditerrivibrio nitroreducens DSM 19672 10008581 YP_004050650.1 CDS Calni_0575 NC_014758.1 602472 604001 D COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052: IPR003356: IPR002296; KEGG: nis:NIS_1707 type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Type I restriction-modification system, M subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); site-specific DNA-methyltransferase (adenine-specific) 602472..604001 Calditerrivibrio nitroreducens DSM 19672 10008583 YP_004050651.1 CDS Calni_0576 NC_014758.1 604007 604261 D KEGG: nis:NIS_1706 death-on-curing family protein; SPTR: Death-on-curing family protein; death-on-curing family protein 604007..604261 Calditerrivibrio nitroreducens DSM 19672 10008584 YP_004050652.1 CDS Calni_0577 NC_014758.1 604248 605687 D COGs: COG2865 transcriptional regulator protein; InterPro IPR001845: IPR007421; KEGG: ddf:DEFDS_0288 ATP-dependent DNA helicase; PFAM: AAA-4 family protein; SPTR: ATP-dependent DNA helicase; PFAM: Sugar-specific transcriptional regulator TrmB; Divergent AAA domain; transcriptional regulator 604248..605687 Calditerrivibrio nitroreducens DSM 19672 10008585 YP_004050653.1 CDS Calni_0578 NC_014758.1 605684 606871 D COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: pmz:HMPREF0659_A6119 type I restriction modification DNA specificity domain protein; PFAM: restriction modification system DNA specificity domain; SPTR: HsdS; PFAM: Type I restriction modification DNA specificity domain; restriction modification system DNA specificity domain 605684..606871 Calditerrivibrio nitroreducens DSM 19672 10008586 YP_004050654.1 CDS Calni_0579 NC_014758.1 606978 607358 D InterPro IPR012657; KEGG: fjo:Fjoh_0085 hypothetical protein; SPTR: uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436; hypothetical protein 606978..607358 Calditerrivibrio nitroreducens DSM 19672 10008587 YP_004050655.1 CDS Calni_0580 NC_014758.1 607342 610560 D COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014021: IPR001650: IPR007409: IPR006935: IPR 014001: IPR004473; KEGG: nis:NIS_1703 type I restriction-modification system, R subunit; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; SPTR: Type I restriction-modification system, R subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3387); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; type I site-specific deoxyribonuclease, hsdr family 607342..610560 Calditerrivibrio nitroreducens DSM 19672 10008588 YP_004050656.1 CDS Calni_0581 NC_014758.1 610734 612386 R COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001460; KEGG: ddf:DEFDS_0448 hypothetical protein; PFAM: penicillin-binding protein transpeptidase; SPTR: uncharacterized protein; PFAM: Penicillin binding protein transpeptidase domain; penicillin-binding protein transpeptidase complement(610734..612386) Calditerrivibrio nitroreducens DSM 19672 10008589 YP_004050657.1 CDS Calni_0582 NC_014758.1 612383 612976 R COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637: IPR020922; KEGG: dap:Dacet_0057 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; PFAM: Ham1 family protein; SPTR: Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; non-canonical purine ntp pyrophosphatase, rdgb/ham1 family complement(612383..612976) Calditerrivibrio nitroreducens DSM 19672 10008590 YP_004050658.1 CDS Calni_0583 NC_014758.1 612973 613689 R COGs: COG0689 RNase PH; InterPro IPR018336: IPR001247: IPR015847: IPR002381; KEGG: ddf:DEFDS_0446 tRNA nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; rnase ph complement(612973..613689) Calditerrivibrio nitroreducens DSM 19672 10008591 YP_004050659.1 CDS Calni_0584 NC_014758.1 613690 614178 R KEGG: sew:SeSA_B0100 histidine kinase; SPTR: uncharacterized protein; hypothetical protein complement(613690..614178) Calditerrivibrio nitroreducens DSM 19672 10008592 YP_004050660.1 CDS Calni_0585 NC_014758.1 614218 615000 R COGs: COG2878 NADH:ubiquinone oxidoreductase subunit RnfB; InterPro IPR017896: IPR017900: IPR007202: IPR010207; KEGG: ddf:DEFDS_0492 electron transport complex protein RnfB; PFAM: Fe-S cluster domain protein; SPTR: Electron transport complex protein RnfB; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; electron transport complex, rnfABCdge type, b subunit complement(614218..615000) Calditerrivibrio nitroreducens DSM 19672 10008593 YP_004050661.1 CDS Calni_0586 NC_014758.1 615012 615587 R COGs: COG4657 NADH:ubiquinone oxidoreductase subunit RnfA; InterPro IPR003667: IPR011293; KEGG: ddf:DEFDS_0491 electron transport complex protein RnfA; PFAM: RnfA-Nqr electron transport subunit; SPTR: Electron transport complex protein RnfA; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; electron transport complex, rnfABCdge type, a subunit complement(615012..615587) Calditerrivibrio nitroreducens DSM 19672 10008594 YP_004050662.1 CDS Calni_0587 NC_014758.1 615596 616189 R COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; InterPro IPR003667: IPR010968; KEGG: ddf:DEFDS_0490 electron transport complex protein RnfE; PFAM: RnfA-Nqr electron transport subunit; SPTR: Electron transport complex protein RnfE; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; electron transport complex, rnfABCdge type, e subunit complement(615596..616189) Calditerrivibrio nitroreducens DSM 19672 10008595 YP_004050663.1 CDS Calni_0588 NC_014758.1 616186 616758 R COGs: COG4659 NADH:ubiquinone oxidoreductase subunit RnfG; InterPro IPR007329: IPR010209; KEGG: ddf:DEFDS_0489 electron transport complex protein RnfG; PFAM: FMN-binding domain protein; SPTR: Electron transport complex protein RnfG; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; electron transport complex, rnfABCdge type, g subunit complement(616186..616758) Calditerrivibrio nitroreducens DSM 19672 10008596 YP_004050664.1 CDS Calni_0589 NC_014758.1 616748 617740 R COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD; InterPro IPR004338: IPR011303; KEGG: ddf:DEFDS_0488 electron transport complex protein RnfD; PFAM: NQR2 and RnfD family protein; SPTR: Electron transport complex protein RnfD; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; electron transport complex, rnfABCdge type, d subunit complement(616748..617740) Calditerrivibrio nitroreducens DSM 19672 10008597 YP_004050665.1 CDS Calni_0590 NC_014758.1 617737 619038 R COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterPro IPR017896: IPR017900: IPR011538: IPR019554: IPR 010208; KEGG: ddf:DEFDS_0487 electron transport complex protein RnfC; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; SPTR: Electron transport complex protein RnfC; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; electron transport complex, rnfABCdge type, c subunit complement(617737..619038) Calditerrivibrio nitroreducens DSM 19672 10008598 YP_004050666.1 CDS Calni_0591 NC_014758.1 619041 619490 R COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR016192: IPR002125: IPR016473; KEGG: ddf:DEFDS_0486 CMP/dCMP deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: CMP/dCMP deaminase, zinc-binding protein; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cmp/dcmp deaminase zinc-binding protein complement(619041..619490) Calditerrivibrio nitroreducens DSM 19672 10008599 YP_004050667.1 CDS Calni_0592 NC_014758.1 619487 620743 R COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR019798: IPR001085; KEGG: ddf:DEFDS_0485 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; serine hydroxymethyltransferase complement(619487..620743) Calditerrivibrio nitroreducens DSM 19672 10008600 YP_004050668.1 CDS Calni_0593 NC_014758.1 620740 621210 R COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500: IPR004785; KEGG: ddf:DEFDS_0484 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose-5-phosphate isomerase complement(620740..621210) Calditerrivibrio nitroreducens DSM 19672 10008601 YP_004050669.1 CDS Calni_0594 NC_014758.1 621468 621734 R KEGG: ddf:DEFDS_1790 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(621468..621734) Calditerrivibrio nitroreducens DSM 19672 10008602 YP_004050670.1 CDS Calni_0595 NC_014758.1 621831 622994 R COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158: IPR007197: IPR006638; KEGG: ddf:DEFDS_0799 hypothetical protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(621831..622994) Calditerrivibrio nitroreducens DSM 19672 10008603 YP_004050671.1 CDS Calni_0596 NC_014758.1 622984 624234 R COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: dap:Dacet_0511 hypothetical protein; PFAM: protein of unknown function DUF107; SPTR: uncharacterized protein; PFAM: Clp protease; NfeD-like; nodulation efficiency protein nfed complement(622984..624234) Calditerrivibrio nitroreducens DSM 19672 10008604 YP_004050672.1 CDS Calni_0597 NC_014758.1 624231 624875 R COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; InterPro IPR003358; KEGG: ddf:DEFDS_0801 methyltransferase; PFAM: methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-n(7)-)-methyltransferase complement(624231..624875) Calditerrivibrio nitroreducens DSM 19672 10008605 YP_004050673.1 CDS Calni_0598 NC_014758.1 624860 625723 R COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: ddf:DEFDS_0802 hypothetical protein; SPTR: uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily; hypothetical protein complement(624860..625723) Calditerrivibrio nitroreducens DSM 19672 10008606 YP_004050674.1 CDS Calni_0599 NC_014758.1 625728 625925 R InterPro IPR015077; KEGG: ddf:DEFDS_0803 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1858); hypothetical protein complement(625728..625925) Calditerrivibrio nitroreducens DSM 19672 10008607 YP_004050675.1 CDS Calni_0600 NC_014758.1 626019 626504 D COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR001497: IPR014048; KEGG: ddf:DEFDS_0223 methylated-DNA--[protein]-cysteine S-methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SPTR: Methylated-DNA--[protein]-cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylated-DNA--protein-cysteine methyltransferase 626019..626504 Calditerrivibrio nitroreducens DSM 19672 10008608 YP_004050676.1 CDS Calni_0601 NC_014758.1 626853 627731 R COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR018236: IPR001636; KEGG: ddf:DEFDS_1861 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(626853..627731) Calditerrivibrio nitroreducens DSM 19672 10008612 YP_004050677.1 CDS Calni_0602 NC_014758.1 627715 629394 R COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763: IPR013027: IPR004099; KEGG: dap:Dacet_0835 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain; fad-dependent pyridine nucleotide-disulfide oxidoreductase complement(627715..629394) Calditerrivibrio nitroreducens DSM 19672 10008613 YP_004050678.1 CDS Calni_0603 NC_014758.1 629405 630652 R COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR013848: IPR020612: IPR007197: IPR006638: IPR 005839: IPR006467; KEGG: ddf:DEFDS_1859 hypothetical protein; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; miab-like tRNA modifying enzyme complement(629405..630652) Calditerrivibrio nitroreducens DSM 19672 10008614 YP_004050679.1 CDS Calni_0604 NC_014758.1 630751 633321 D COGs: COG2844 UTP:GlnB (protein PII) uridylyltransferase; InterPro IPR002934: IPR013546: IPR006674: IPR002912: IPR 003607: IPR010043; KEGG: ddf:DEFDS_1857 protein-P-II uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein; PRIAM: [Protein-PII] uridylyltransferase; SMART: metal-dependent phosphohydrolase HD region; SPTR: Protein-P-II uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; HD domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase; UTP-glnb uridylyltransferase, glnd 630751..633321 Calditerrivibrio nitroreducens DSM 19672 10008615 YP_004050680.1 CDS Calni_0605 NC_014758.1 633541 633753 D KEGG: mlo:mll0525 hypothetical protein; SPTR: Mll0525 protein; hypothetical protein 633541..633753 Calditerrivibrio nitroreducens DSM 19672 10008616 YP_004050681.1 CDS Calni_0606 NC_014758.1 633813 634211 R KEGG: ddf:DEFDS_1277 hypothetical protein; SPTR: uncharacterized protein; PFAM: Stringent starvation protein B; hypothetical protein complement(633813..634211) Calditerrivibrio nitroreducens DSM 19672 10008617 YP_004050682.1 CDS Calni_0607 NC_014758.1 634227 635147 R COGs: COG1893 Ketopantoate reductase; InterPro IPR003710: IPR013332: IPR013752; KEGG: clj:CLJU_c08720 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; PRIAM: 2-dehydropantoate 2-reductase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase complement(634227..635147) Calditerrivibrio nitroreducens DSM 19672 10008618 YP_004050683.1 CDS Calni_0608 NC_014758.1 635144 636073 R COGs: COG0731 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: ddf:DEFDS_0828 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(635144..636073) Calditerrivibrio nitroreducens DSM 19672 10008619 YP_004050684.1 CDS Calni_0609 NC_014758.1 636081 637016 R KEGG: drt:Dret_1494 hypothetical protein; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220); hypothetical protein complement(636081..637016) Calditerrivibrio nitroreducens DSM 19672 10008620 YP_004050685.1 CDS Calni_0610 NC_014758.1 637013 640510 R COGs: COG3096 conserved hypothetical protein involved in chromosome partitioning; InterPro IPR004969; KEGG: drt:Dret_1493 SMC domain protein; SPTR: SMC domain protein; PFAM: MukB N-terminal; hypothetical protein complement(637013..640510) Calditerrivibrio nitroreducens DSM 19672 10008621 YP_004050686.1 CDS Calni_0611 NC_014758.1 640507 641193 R KEGG: mcd:MCRO_0480 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(640507..641193) Calditerrivibrio nitroreducens DSM 19672 10008622 YP_004050687.1 CDS Calni_0612 NC_014758.1 641162 642454 R KEGG: drt:Dret_1491 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(641162..642454) Calditerrivibrio nitroreducens DSM 19672 10008623 YP_004050688.1 CDS Calni_0613 NC_014758.1 642576 642974 D COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ddf:DEFDS_1113 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (transcriptional regulator); BadM/Rrf2 family transcriptional regulator 642576..642974 Calditerrivibrio nitroreducens DSM 19672 10008624 YP_004050689.1 CDS Calni_0614 NC_014758.1 643133 645421 D InterPro IPR013344: IPR013509: IPR000788; KEGG: ddf:DEFDS_1169 ribonucleoside-diphosphate reductase alpha chain; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; ribonucleoside-diphosphate reductase 643133..645421 Calditerrivibrio nitroreducens DSM 19672 10008625 YP_004050690.1 CDS Calni_0615 NC_014758.1 645605 646090 D KEGG: ddf:DEFDS_0297 hypothetical protein; SPTR: uncharacterized protein; PFAM: DsrE/DsrF-like family; hypothetical protein 645605..646090 Calditerrivibrio nitroreducens DSM 19672 10008626 YP_004050691.1 CDS Calni_0616 NC_014758.1 646191 646361 D InterPro IPR017900: IPR000813: IPR017896; KEGG: ddf:DEFDS_2170 4Fe-4S ferredoxin; SPTR: 4Fe-4S ferredoxin; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 646191..646361 Calditerrivibrio nitroreducens DSM 19672 10008627 YP_004050692.1 CDS Calni_0617 NC_014758.1 646426 647085 D COGs: COG1045 Serine acetyltransferase; InterPro IPR005881: IPR001451; KEGG: ddf:DEFDS_2169 serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; serine o-acetyltransferase 646426..647085 Calditerrivibrio nitroreducens DSM 19672 10008628 YP_004050693.1 CDS Calni_0618 NC_014758.1 647069 647482 D COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ddf:DEFDS_2168 Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (transcriptional regulator); BadM/Rrf2 family transcriptional regulator 647069..647482 Calditerrivibrio nitroreducens DSM 19672 10008629 YP_004050694.1 CDS Calni_0619 NC_014758.1 647485 648642 D COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192: IPR016454: IPR020578; KEGG: ddf:DEFDS_2167 cysteine desulfurase; PFAM: aminotransferase class V; SPTR: Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; aminotransferase class v 647485..648642 Calditerrivibrio nitroreducens DSM 19672 10008630 YP_004050695.1 CDS Calni_0620 NC_014758.1 648653 648901 D KEGG: ddf:DEFDS_1866 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 648653..648901 Calditerrivibrio nitroreducens DSM 19672 10008631 YP_004050696.1 CDS Calni_0621 NC_014758.1 648898 649554 D COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265: IPR003651: IPR004035; KEGG: ddf:DEFDS_1865 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; SPTR: Endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; DNA-(apurinic or apyrimidinic site) lyase 648898..649554 Calditerrivibrio nitroreducens DSM 19672 10008632 YP_004050697.1 CDS Calni_0622 NC_014758.1 649557 650012 D COGs: COG1522 Transcriptional regulators; InterPro IPR019888: IPR019887: IPR000485; KEGG: ddf:DEFDS_1864 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; SPTR: Transcriptional regulator, AsnC family; PFAM: AsnC family; ArsR family transcriptional regulator 649557..650012 Calditerrivibrio nitroreducens DSM 19672 10008633 YP_004050698.1 CDS Calni_0623 NC_014758.1 650015 650788 D COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dap:Dacet_2405 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 650015..650788 Calditerrivibrio nitroreducens DSM 19672 10008634 YP_004050699.1 CDS Calni_0624 NC_014758.1 650799 651410 D COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: dal:Dalk_0438 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family; isochorismatase hydrolase 650799..651410 Calditerrivibrio nitroreducens DSM 19672 10008635 YP_004050700.1 CDS Calni_0625 NC_014758.1 651429 651929 D COGs: COG1592 Rubrerythrin; InterPro IPR003251: IPR004039: IPR009040; KEGG: ddf:DEFDS_0019 rubrerythrin; PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubrerythrin; PFAM: Rubrerythrin; rubrerythrin 651429..651929 Calditerrivibrio nitroreducens DSM 19672 10008636 YP_004050701.1 CDS Calni_0626 NC_014758.1 652091 652948 D KEGG: dat:HRM2_45060 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 652091..652948 Calditerrivibrio nitroreducens DSM 19672 10008637 YP_004050702.1 CDS Calni_0627 NC_014758.1 652989 654203 R COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterPro IPR010205: IPR001041: IPR008333: IPR001433: IPR 001709: IPR017927; KEGG: dap:Dacet_2017 NADH:ubiquinone oxidoreductase, subunit F; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; Oxidoreductase FAD-binding domain protein; SPTR: NADH:ubiquinone oxidoreductase, subunit F; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit F; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; NADH:ubiquinone oxidoreductase, subunit f complement(652989..654203) Calditerrivibrio nitroreducens DSM 19672 10008638 YP_004050703.1 CDS Calni_0628 NC_014758.1 654200 654811 R COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; InterPro IPR010967: IPR003667; KEGG: dap:Dacet_2018 NADH:ubiquinone oxidoreductase, subunit E; PFAM: RnfA-Nqr electron transport subunit; SPTR: Na(+)-translocating NADH-quinone reductase subunit E; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit E; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NADH:ubiquinone oxidoreductase, subunit e complement(654200..654811) Calditerrivibrio nitroreducens DSM 19672 10008639 YP_004050704.1 CDS Calni_0629 NC_014758.1 654808 655428 R COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR011292: IPR003667: IPR002052; KEGG: ddf:DEFDS_1915 Na(+)-translocating NADH-quinone reductase subunit D; PFAM: RnfA-Nqr electron transport subunit; SPTR: Na(+)-translocating NADH-quinone reductase subunit D; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit D; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; NADH:ubiquinone oxidoreductase, subunit d complement(654808..655428) Calditerrivibrio nitroreducens DSM 19672 10008640 YP_004050705.1 CDS Calni_0630 NC_014758.1 655418 656146 R COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR010204: IPR007329; KEGG: dap:Dacet_2020 NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding domain protein; SPTR: NADH:ubiquinone oxidoreductase, subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; NADH:ubiquinone oxidoreductase, subunit c complement(655418..656146) Calditerrivibrio nitroreducens DSM 19672 10008641 YP_004050706.1 CDS Calni_0631 NC_014758.1 656127 657323 R COGs: COG1805 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrB; InterPro IPR010966: IPR004338; KEGG: dap:Dacet_2021 NADH:ubiquinone oxidoreductase, subunit B; PFAM: NQR2 and RnfD family protein; SPTR: NADH:ubiquinone oxidoreductase, subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit B; PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; NADH:ubiquinone oxidoreductase, subunit b complement(656127..657323) Calditerrivibrio nitroreducens DSM 19672 10008642 YP_004050707.1 CDS Calni_0632 NC_014758.1 657323 658642 R COGs: COG1726 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrA; InterPro IPR008703; KEGG: maq:Maqu_1931 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A; SPTR: Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit A; PFAM: NQRA C-terminal domain; Na(+)-translocating NADH-quinone reductase subunit A (NQRA); TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; NADH:ubiquinone oxidoreductase, subunit a complement(657323..658642) Calditerrivibrio nitroreducens DSM 19672 10008643 YP_004050708.1 CDS Calni_0633 NC_014758.1 658756 659514 D COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: ddf:DEFDS_1267 stationary-phase survival protein; PFAM: Survival protein SurE; SPTR: 5'-nucleotidase surE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; 5'-nucleotidase 658756..659514 Calditerrivibrio nitroreducens DSM 19672 10008644 YP_004050709.1 CDS Calni_0634 NC_014758.1 659511 659627 D KEGG: dap:Dacet_1100 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 659511..659627 Calditerrivibrio nitroreducens DSM 19672 10008645 YP_004050710.1 CDS Calni_0635 NC_014758.1 659624 662302 D KEGG: ddf:DEFDS_1266 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 659624..662302 Calditerrivibrio nitroreducens DSM 19672 10008646 YP_004050711.1 CDS Calni_0636 NC_014758.1 662302 662913 D COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: ddf:DEFDS_1265 biopolymer transport protein, ExbB/TolQ family; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Biopolymer transport protein, ExbB/TolQ family; PFAM: MotA/TolQ/ExbB proton channel family; mota/tolq/exbb proton channel 662302..662913 Calditerrivibrio nitroreducens DSM 19672 10008647 YP_004050712.1 CDS Calni_0637 NC_014758.1 662910 663323 D COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: dap:Dacet_1103 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein exbd/tolr 662910..663323 Calditerrivibrio nitroreducens DSM 19672 10008648 YP_004050713.1 CDS Calni_0638 NC_014758.1 663323 664048 D KEGG: ddf:DEFDS_1263 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: TonB family C-terminal domain; hypothetical protein 663323..664048 Calditerrivibrio nitroreducens DSM 19672 10008649 YP_004050714.1 CDS Calni_0639 NC_014758.1 664051 665199 D COGs: COG1565 conserved hypothetical protein; InterPro IPR003788; KEGG: ddf:DEFDS_1262 hypothetical protein; PFAM: protein of unknown function DUF185; SPTR: uncharacterized protein; PFAM: Uncharacterized ACR, COG1565; hypothetical protein 664051..665199 Calditerrivibrio nitroreducens DSM 19672 10008650 YP_004050715.1 CDS Calni_0640 NC_014758.1 665186 665950 D COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145: IPR002942; KEGG: ddf:DEFDS_0560 hypothetical protein; PFAM: pseudouridine synthase; SPTR: uncharacterized protein; PFAM: RNA pseudouridylate synthase; pseudouridine synthase 665186..665950 Calditerrivibrio nitroreducens DSM 19672 10008651 YP_004050716.1 CDS Calni_0641 NC_014758.1 666052 667434 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR003593: IPR002078: IPR002197: IPR 020441; KEGG: ddf:DEFDS_1454 two-component, sigma54 specific, transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two-component, sigma54 specific, transcriptional regulator; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator complement(666052..667434) Calditerrivibrio nitroreducens DSM 19672 10008652 YP_004050717.1 CDS Calni_0642 NC_014758.1 667409 668776 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR004358: IPR005467; KEGG: ddf:DEFDS_1455 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(667409..668776) Calditerrivibrio nitroreducens DSM 19672 10008653 YP_004050718.1 CDS Calni_0643 NC_014758.1 668745 669605 R COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR005770; KEGG: ddf:DEFDS_1456 phosphate/phosphonate ABC transporter substrate-binding protein; SPTR: Phosphate/phosphonate ABC transporter, substrate-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; phosphonate ABC transporter substrate-binding protein complement(668745..669605) Calditerrivibrio nitroreducens DSM 19672 10008654 YP_004050719.1 CDS Calni_0644 NC_014758.1 669801 670115 D KEGG: gur:Gura_0469 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 669801..670115 Calditerrivibrio nitroreducens DSM 19672 10008655 YP_004050720.1 CDS Calni_0645 NC_014758.1 670135 670788 D COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR017900: IPR017909: IPR017896; KEGG: pas:Pars_0387 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; tetrathionate reductase subunit beta 670135..670788 Calditerrivibrio nitroreducens DSM 19672 10008656 YP_004050721.1 CDS Calni_0646 NC_014758.1 670807 674235 D COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006311: IPR006963: IPR006656: IPR006657: IPR 017909; KEGG: pai:PAE1265 molybdopterin oxidoreductase, molybdopterin binding subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; SPTR: Molybdopterin oxidoreductase, molybdopterin binding subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; tetrathionate reductase subunit alpha 670807..674235 Calditerrivibrio nitroreducens DSM 19672 10008657 YP_004050722.1 CDS Calni_0647 NC_014758.1 674229 674804 D KEGG: pfa:PF13_0284 conserved Plasmodium protein, unknown function; SPTR: uncharacterized protein; hypothetical protein 674229..674804 Calditerrivibrio nitroreducens DSM 19672 10008658 YP_004050723.1 CDS Calni_0648 NC_014758.1 674880 675821 D COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: ddf:DEFDS_1151 hypothetical protein; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: uncharacterized protein; PFAM: PPIC-type PPIASE domain; ppic-type peptidyl-prolyl cis-trans isomerase 674880..675821 Calditerrivibrio nitroreducens DSM 19672 10008659 YP_004050724.1 CDS Calni_0649 NC_014758.1 675872 676495 R COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: tai:Taci_0382 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family; nitroreductase complement(675872..676495) Calditerrivibrio nitroreducens DSM 19672 10008660 YP_004050725.1 CDS Calni_0650 NC_014758.1 676601 677089 D COGs: COG0669 Phosphopantetheine adenylyltransferase; InterPro IPR004821: IPR001980: IPR004820; KEGG: ddf:DEFDS_0158 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; phosphopantetheine adenylyltransferase 676601..677089 Calditerrivibrio nitroreducens DSM 19672 10008661 YP_004050726.1 CDS Calni_0652 NC_014758.1 677547 678764 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_0160 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: uncharacterized protein; PFAM: Response regulator receiver domain; response regulator receiver protein 677547..678764 Calditerrivibrio nitroreducens DSM 19672 10008663 YP_004050727.1 CDS Calni_0653 NC_014758.1 678774 679136 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: ddf:DEFDS_0161 twitching motility two-component system response regulator PilH; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Twitching motility two-component system response regulator PilH; PFAM: Response regulator receiver domain; response regulator receiver protein 678774..679136 Calditerrivibrio nitroreducens DSM 19672 10008664 YP_004050728.1 CDS Calni_0654 NC_014758.1 679133 679606 D COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: csc:Csac_0818 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: CheW protein; PFAM: CheW-like domain; chew protein 679133..679606 Calditerrivibrio nitroreducens DSM 19672 10008665 YP_004050729.1 CDS Calni_0655 NC_014758.1 679610 681775 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660: IPR004089; KEGG: ddf:DEFDS_0163 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: uncharacterized protein; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 679610..681775 Calditerrivibrio nitroreducens DSM 19672 10008666 YP_004050730.1 CDS Calni_0656 NC_014758.1 681775 684168 D COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207: IPR003594: IPR002545: IPR001789: IPR 004358: IPR005467; KEGG: ddf:DEFDS_0164 hypothetical protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SPTR: uncharacterized protein; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Hpt domain; chea signal transduction histidine kinase 681775..684168 Calditerrivibrio nitroreducens DSM 19672 10008667 YP_004050731.1 CDS Calni_0657 NC_014758.1 684143 684511 D KEGG: ddf:DEFDS_0165 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 684143..684511 Calditerrivibrio nitroreducens DSM 19672 10008668 YP_004050732.1 CDS Calni_0658 NC_014758.1 684501 685766 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_0166 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: uncharacterized protein; PFAM: Response regulator receiver domain; response regulator receiver protein 684501..685766 Calditerrivibrio nitroreducens DSM 19672 10008669 YP_004050733.1 CDS Calni_0659 NC_014758.1 685766 686812 D COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733: IPR000728: IPR010918; KEGG: dap:Dacet_3019 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylformylglycinamidine cyclo-ligase 685766..686812 Calditerrivibrio nitroreducens DSM 19672 10008670 YP_004050734.1 CDS Calni_0660 NC_014758.1 686809 687420 D COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR004607: IPR002376: IPR001555; KEGG: ddf:DEFDS_0168 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 686809..687420 Calditerrivibrio nitroreducens DSM 19672 10008671 YP_004050735.1 CDS Calni_0661 NC_014758.1 687475 688737 D COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: dap:Dacet_3021 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase m16 domain-containing protein 687475..688737 Calditerrivibrio nitroreducens DSM 19672 10008672 YP_004050736.1 CDS Calni_0662 NC_014758.1 688771 689364 R COGs: COG0450 Peroxiredoxin; InterPro IPR000866: IPR019479: IPR017936; KEGG: ddf:DEFDS_0018 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; SPTR: Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen complement(688771..689364) Calditerrivibrio nitroreducens DSM 19672 10008673 YP_004050737.1 CDS Calni_0663 NC_014758.1 689455 689970 R COGs: COG1528 Ferritin-like protein; InterPro IPR008331: IPR009040; KEGG: ddf:DEFDS_0829 ferritin; PFAM: Ferritin Dps family protein; PRIAM: Ferroxidase; SPTR: Ferritin; PFAM: Ferritin-like domain; ferroxidase complement(689455..689970) Calditerrivibrio nitroreducens DSM 19672 10008674 YP_004050738.1 CDS Calni_0664 NC_014758.1 690061 692193 R COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR004811: IPR003607: IPR006674: IPR007685: IPR 004095: IPR002912; KEGG: ddf:DEFDS_0048 GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; (p)ppGpp synthetase I SpoT/RelA complement(690061..692193) Calditerrivibrio nitroreducens DSM 19672 10008675 YP_004050739.1 CDS Calni_0665 NC_014758.1 692197 693957 R COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610: IPR001667: IPR003156; KEGG: ddf:DEFDS_0047 single-strand DNA-specific exonuclease; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Single-strand DNA-specific exonuclease; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease recj complement(692197..693957) Calditerrivibrio nitroreducens DSM 19672 10008676 YP_004050740.1 CDS Calni_0666 NC_014758.1 694103 695443 R COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tye:THEYE_A1167 sulfur transferase, selenocysteine-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: sulfur transferase, selenocysteine-containing protein; PFAM: Rhodanese-like domain; rhodanese domain-containing protein complement(694103..695443) Calditerrivibrio nitroreducens DSM 19672 10008677 YP_004050741.1 CDS Calni_0667 NC_014758.1 695557 697524 D COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterPro IPR004807: IPR014001: IPR001650: IPR006935: IPR 001943: IPR014021; KEGG: ddf:DEFDS_0663 excinuclease ABC subunit B; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; manually curated; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit b 695557..697524 Calditerrivibrio nitroreducens DSM 19672 10008678 YP_004050742.1 CDS Calni_0668 NC_014758.1 697528 699777 D COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR011816: IPR001264: IPR001460; KEGG: ddf:DEFDS_0662 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; penicillin-binding protein, 1a family 697528..699777 Calditerrivibrio nitroreducens DSM 19672 10008679 YP_004050743.1 CDS Calni_0669 NC_014758.1 699777 700721 D COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterPro IPR003594: IPR004358: IPR005467; KEGG: dap:Dacet_0840 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 699777..700721 Calditerrivibrio nitroreducens DSM 19672 10008680 YP_004050744.1 CDS Calni_0670 NC_014758.1 700714 702114 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR003593: IPR002078: IPR002197: IPR 020441; KEGG: ddf:DEFDS_0660 two-component system, NtrC family, nitrogen regulation response regulator GlnG; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two-component system, NtrC family, nitrogen regulation response regulator GlnG; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator 700714..702114 Calditerrivibrio nitroreducens DSM 19672 10008681 YP_004050745.1 CDS Calni_0671 NC_014758.1 702095 704041 D COGs: COG0557 Exoribonuclease R; InterPro IPR011805: IPR004476: IPR011129: IPR013223: IPR 001900: IPR003029: IPR000209; KEGG: ddf:DEFDS_0659 ribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; SPTR: Ribonuclease; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; ribonuclease r 702095..704041 Calditerrivibrio nitroreducens DSM 19672 10008682 YP_004050746.1 CDS Calni_0672 NC_014758.1 704100 705161 R COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891: IPR002034; KEGG: dap:Dacet_1054 pyruvate carboxyltransferase; PFAM: pyruvate carboxyltransferase; SPTR: Pyruvate carboxyltransferase; PFAM: HMGL-like; pyruvate carboxyltransferase complement(704100..705161) Calditerrivibrio nitroreducens DSM 19672 10008683 YP_004050747.1 CDS Calni_0673 NC_014758.1 705336 706223 D COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638: IPR007197: IPR000385; KEGG: dap:Dacet_1055 nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; radical SAM domain-containing protein 705336..706223 Calditerrivibrio nitroreducens DSM 19672 10008684 YP_004050748.1 CDS Calni_0674 NC_014758.1 706233 706508 D KEGG: dap:Dacet_1056 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 706233..706508 Calditerrivibrio nitroreducens DSM 19672 10008685 YP_004050749.1 CDS Calni_0675 NC_014758.1 706521 708107 D COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR003593: IPR002078: IPR002197: IPR020441; KEGG: dap:Dacet_1039 transcriptional regulator, NifA subfamily, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Transcriptional regulator, NifA, Fis Family; PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein; Fis family sigma-54 dependent transcriptional regulator 706521..708107 Calditerrivibrio nitroreducens DSM 19672 10008686 YP_004050750.1 CDS Calni_0676 NC_014758.1 708125 708385 R InterPro IPR007415; KEGG: dap:Dacet_1041 NifZ family protein; PFAM: NifZ family protein; SPTR: NifZ family protein; PFAM: NifZ domain; nifz family protein complement(708125..708385) Calditerrivibrio nitroreducens DSM 19672 10008687 YP_004050751.1 CDS Calni_0677 NC_014758.1 708372 708659 R InterPro IPR014283: IPR017900: IPR017896; KEGG: rsk:RSKD131_1869 4Fe-4S ferredoxin, iron-sulfur binding domain protein; SPTR: dimeric ferredoxin (FdIII); TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S binding domain; TIGRFAM: ferredoxin III, nif-specific; ferredoxin iii, nif-specific complement(708372..708659) Calditerrivibrio nitroreducens DSM 19672 10008688 YP_004050752.1 CDS Calni_0678 NC_014758.1 708858 710213 D COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: dap:Dacet_1050 nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; nitrogenase 708858..710213 Calditerrivibrio nitroreducens DSM 19672 10008689 YP_004050753.1 CDS Calni_0679 NC_014758.1 710210 711520 D COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: dap:Dacet_1051 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; nitrogenase 710210..711520 Calditerrivibrio nitroreducens DSM 19672 10008690 YP_004050754.1 CDS Calni_0680 NC_014758.1 711501 711878 D InterPro IPR003731; KEGG: tye:THEYE_A1713 nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX; dinitrogenase iron-molybdenum cofactor biosynthesis protein 711501..711878 Calditerrivibrio nitroreducens DSM 19672 10008691 YP_004050755.1 CDS Calni_0681 NC_014758.1 711865 712272 D KEGG: naz:Aazo_1347 nitrogen fixation protein; SPTR: Nitrogen fixation protein; PFAM: Protein of unknown function, DUF269; TIGRFAM: probable nitrogen fixation protein; nitrogen fixation protein 711865..712272 Calditerrivibrio nitroreducens DSM 19672 10008692 YP_004050756.1 CDS Calni_0682 NC_014758.1 712243 713127 R COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: dap:Dacet_1043 ADP-ribosyl-(dinitrogen reductase) hydrolase; PFAM: ADP-ribosylation/Crystallin J1; PRIAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; SPTR: ADP-ribosyl-(Dinitrogen reductase) hydrolase; PFAM: ADP-ribosylglycohydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; ADP-ribosyl-(dinitrogen reductase) hydrolase complement(712243..713127) Calditerrivibrio nitroreducens DSM 19672 10008693 YP_004050757.1 CDS Calni_0683 NC_014758.1 713162 713950 D InterPro IPR009953; KEGG: dap:Dacet_1042 NAD(+)--dinitrogen-reductaseADP-D-ribosyltransfe rase; PFAM: Dinitrogenase reductase ADP-ribosyltransferase; PRIAM: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase; SPTR: NAD(+)--dinitrogen-reductaseADP-D-ribosyltransfe rase; PFAM: Dinitrogenase reductase ADP-ribosyltransferase (DRAT); nad(+)--dinitrogen-reductase ADP-d-ribosyltransferase 713162..713950 Calditerrivibrio nitroreducens DSM 19672 10008694 YP_004050758.1 CDS Calni_0684 NC_014758.1 714166 715035 D COGs: COG1348 Nitrogenase subunit NifH (ATPase); InterPro IPR005977: IPR000392; KEGG: dap:Dacet_1046 nitrogenase iron protein; PFAM: NifH/frxC-family protein; PRIAM: Nitrogenase; SPTR: Nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; mo-nitrogenase iron protein subunit nifh 714166..715035 Calditerrivibrio nitroreducens DSM 19672 10008695 YP_004050759.1 CDS Calni_0685 NC_014758.1 715049 716494 D COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR005972: IPR010143: IPR000510: IPR000318; KEGG: dap:Dacet_1047 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Nitrogenase protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain; mo-nitrogenase mofe protein subunit nifd 715049..716494 Calditerrivibrio nitroreducens DSM 19672 10008696 YP_004050760.1 CDS Calni_0686 NC_014758.1 716496 718007 D COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR005976: IPR000510: IPR000318; KEGG: dap:Dacet_1048 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; PRIAM: Nitrogenase; SPTR: Nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: Domain of unknown function (DUF3364); Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; mo-nitrogenase mofe protein subunit nifk 716496..718007 Calditerrivibrio nitroreducens DSM 19672 10008697 YP_004050761.1 CDS Calni_0687 NC_014758.1 718051 718251 D InterPro IPR009727; KEGG: dap:Dacet_1049 nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; SPTR: Nitrogen fixation protein FixT; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT; nitrogen fixation protein fixt 718051..718251 Calditerrivibrio nitroreducens DSM 19672 10008698 YP_004050762.1 CDS Calni_0688 NC_014758.1 718264 719064 R COGs: COG4148 ABC-type molybdate transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: saf:SULAZ_0044 spermidine/putrescine import ATP-binding protein PotA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATPase; PFAM: ABC transporter; ABC transporter complement(718264..719064) Calditerrivibrio nitroreducens DSM 19672 10008699 YP_004050763.1 CDS Calni_0689 NC_014758.1 719067 719756 R COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR011867: IPR000515; KEGG: tdn:Suden_0925 molybdate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Molybdate ABC transporter, permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdate ABC transporter inner membrane subunit complement(719067..719756) Calditerrivibrio nitroreducens DSM 19672 10008700 YP_004050764.1 CDS Calni_0690 NC_014758.1 719760 720494 R COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950: IPR006059; KEGG: aae:aq_1609 molybdate periplasmic binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Molybdate periplasmic binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(719760..720494) Calditerrivibrio nitroreducens DSM 19672 10008701 YP_004050765.1 CDS Calni_0691 NC_014758.1 720817 721437 D COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR006200: IPR006199: IPR019759: IPR006197; KEGG: dap:Dacet_1375 transcriptional repressor, LexA family; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; SPTR: LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; transcriptional repressor 720817..721437 Calditerrivibrio nitroreducens DSM 19672 10008702 YP_004050766.1 CDS Calni_0692 NC_014758.1 721418 721666 D KEGG: ddf:DEFDS_0499 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 721418..721666 Calditerrivibrio nitroreducens DSM 19672 10008703 YP_004050767.1 CDS Calni_0693 NC_014758.1 721663 722865 D COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR001126: IPR017963; KEGG: ddf:DEFDS_0477 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV; PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; DNA-directed DNA polymerase 721663..722865 Calditerrivibrio nitroreducens DSM 19672 10008704 YP_004050768.1 CDS Calni_0694 NC_014758.1 722900 723604 R COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: ddf:DEFDS_1066 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter; amino acid/amide ABC transporter ATP-binding protein 2, haat family complement(722900..723604) Calditerrivibrio nitroreducens DSM 19672 10008705 YP_004050769.1 CDS Calni_0695 NC_014758.1 723597 724379 R COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: ddf:DEFDS_1065 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid/amide ABC transporter ATP-binding protein 1, haat family complement(723597..724379) Calditerrivibrio nitroreducens DSM 19672 10008706 YP_004050770.1 CDS Calni_0696 NC_014758.1 724387 725223 R COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ddf:DEFDS_1064 branched-chain amino acid ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component; amino acid/amide ABC transporter membrane protein 2, haat family complement(724387..725223) Calditerrivibrio nitroreducens DSM 19672 10008707 YP_004050771.1 CDS Calni_0697 NC_014758.1 725233 726090 R COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: ddf:DEFDS_1063 branched-chain amino acid ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component; amino acid/amide ABC transporter membrane protein 1, haat family complement(725233..726090) Calditerrivibrio nitroreducens DSM 19672 10008708 YP_004050772.1 CDS Calni_0698 NC_014758.1 726181 727323 R COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828: IPR000709; KEGG: ddf:DEFDS_1062 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; PFAM: Receptor family ligand binding region; extracellular ligand-binding receptor complement(726181..727323) Calditerrivibrio nitroreducens DSM 19672 10008709 YP_004050773.1 CDS Calni_0699 NC_014758.1 727616 728161 D InterPro IPR001387: IPR013096; KEGG: ddf:DEFDS_1061 transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix; cupin 2 barrel domain-containing protein 727616..728161 Calditerrivibrio nitroreducens DSM 19672 10008710 YP_004050774.1 CDS Calni_0700 NC_014758.1 728242 728433 R COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: ddf:DEFDS_0316 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 complement(728242..728433) Calditerrivibrio nitroreducens DSM 19672 10008711 YP_004050775.1 CDS Calni_0701 NC_014758.1 728554 730212 D InterPro IPR004477; KEGG: dap:Dacet_0044 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; ComEC/rec2-like protein 728554..730212 Calditerrivibrio nitroreducens DSM 19672 10008712 YP_004050776.1 CDS Calni_0702 NC_014758.1 730215 730565 R KEGG: dap:Dacet_0419 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(730215..730565) Calditerrivibrio nitroreducens DSM 19672 10008713 YP_004050777.1 CDS Calni_0703 NC_014758.1 730528 732186 R COGs: COG2262 GTPase; InterPro IPR016496: IPR005225: IPR002917: IPR006073; KEGG: ddf:DEFDS_1593 small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: Small GTP-binding protein; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; manually curated; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; GTP-binding protein hflx complement(730528..732186) Calditerrivibrio nitroreducens DSM 19672 10008714 YP_004050778.1 CDS Calni_0704 NC_014758.1 732254 733471 D COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817: IPR005110: IPR001453: IPR005111; KEGG: ddf:DEFDS_1594 molybdopterin biosynthesis protein MoeA; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: Molybdopterin biosynthesis protein MoeA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 732254..733471 Calditerrivibrio nitroreducens DSM 19672 10008715 YP_004050779.1 CDS Calni_0705 NC_014758.1 733468 734103 D COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145: IPR006224; KEGG: ddf:DEFDS_1595 ribosomal large subunit pseudouridine synthase A; PFAM: pseudouridine synthase; SPTR: Ribosomal large subunit pseudouridine synthase A; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; pseudouridine synthase 733468..734103 Calditerrivibrio nitroreducens DSM 19672 10008716 YP_004050780.1 CDS Calni_0706 NC_014758.1 734199 736469 D COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492: IPR001029; KEGG: dap:Dacet_0501 flagellin domain protein; PFAM: flagellin domain protein; SPTR: Flagellin domain protein; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin domain-containing protein 734199..736469 Calditerrivibrio nitroreducens DSM 19672 10008717 YP_004050781.1 CDS Calni_0707 NC_014758.1 736508 736687 D KEGG: dap:Dacet_0502 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 736508..736687 Calditerrivibrio nitroreducens DSM 19672 10008718 YP_004050782.1 CDS Calni_0708 NC_014758.1 736815 736970 D hypothetical protein 736815..736970 Calditerrivibrio nitroreducens DSM 19672 10008719 YP_004050783.1 CDS Calni_0709 NC_014758.1 736970 737962 D COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR020025: IPR003869; KEGG: rhi:NGR_b09450 RkpL, polysaccharide biosynthesis protein UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Polysaccharide biosynthesis protein CapD; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; UDP-N-acetylglucosamine 4,6-dehydratase 736970..737962 Calditerrivibrio nitroreducens DSM 19672 10008720 YP_004050784.1 CDS Calni_0710 NC_014758.1 737985 739178 D COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR020026: IPR000653; KEGG: msi:Msm_1536 pleiotropic regulatory protein DegT (PLP-dependent); PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Pleiotropic regulatory protein DegT (PLP-dependent); TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; UDP-4-keto-6-deoxy-n-acetylglucosamine 4-aminotransferase 737985..739178 Calditerrivibrio nitroreducens DSM 19672 10008721 YP_004050785.1 CDS Calni_0711 NC_014758.1 739175 740023 D COGs: COG1861 Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase homolog; InterPro IPR003329; KEGG: msi:Msm_1537 acylneuraminate cytidylyltransferase NeuS; PFAM: acylneuraminate cytidylyltransferase; SPTR: cytidylyltransferase; PFAM: Cytidylyltransferase; acylneuraminate cytidylyltransferase 739175..740023 Calditerrivibrio nitroreducens DSM 19672 10008722 YP_004050786.1 CDS Calni_0712 NC_014758.1 740118 740318 D InterPro IPR019239; KEGG: tmt:Tmath_2080 protein of unknown function DUF2191; PFAM: Protein of unknown function DUF2191; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2191); hypothetical protein 740118..740318 Calditerrivibrio nitroreducens DSM 19672 10008723 YP_004050787.1 CDS Calni_0713 NC_014758.1 740321 740722 D InterPro IPR002716; KEGG: tmt:Tmath_2081 PilT protein domain protein; PFAM: PilT protein domain protein; SPTR: PilT protein domain protein; PFAM: PIN domain; pilt protein domain-containing protein 740321..740722 Calditerrivibrio nitroreducens DSM 19672 10008724 YP_004050788.1 CDS Calni_0714 NC_014758.1 740736 741731 D COGs: COG3980 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase; InterPro IPR020023: IPR007235; KEGG: msi:Msm_1538 CMP-sialic acid synthetase, NeuA; PFAM: Glycosyltransferase 28 domain; SPTR: Glycosyltransferase; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; pseudaminic acid biosynthesis-associated protein pseg 740736..741731 Calditerrivibrio nitroreducens DSM 19672 10008725 YP_004050789.1 CDS Calni_0715 NC_014758.1 741824 743179 D COGs: COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR002480; KEGG: dak:DaAHT2_1993 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: Class-II DAHP synthetase family; 3-deoxy-7-phosphoheptulonate synthase 741824..743179 Calditerrivibrio nitroreducens DSM 19672 10008726 YP_004050790.1 CDS Calni_0716 NC_014758.1 743157 744644 D COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873: IPR020845; KEGG: hba:Hbal_2325 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase 743157..744644 Calditerrivibrio nitroreducens DSM 19672 10008727 YP_004050791.1 CDS Calni_0717 NC_014758.1 744646 745725 D InterPro IPR006342; KEGG: cbk:CLL_A2332 methyltransferase FkbM family; SPTR: methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family; methyltransferase fkbm family 744646..745725 Calditerrivibrio nitroreducens DSM 19672 10008728 YP_004050792.1 CDS Calni_0718 NC_014758.1 745744 746817 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: hba:Hbal_2324 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 745744..746817 Calditerrivibrio nitroreducens DSM 19672 10008729 YP_004050793.1 CDS Calni_0719 NC_014758.1 746829 747089 D KEGG: nmr:Nmar_0143 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 746829..747089 Calditerrivibrio nitroreducens DSM 19672 10008730 YP_004050794.1 CDS Calni_0720 NC_014758.1 747076 748926 D COGs: COG4310 Uncharacterized protein with an aminopeptidase-like domain; KEGG: nmr:Nmar_0144 aminoglycoside N3'-acetyltransferase; SPTR: Aminoglycoside N3'-acetyltransferase; PFAM: Domain of unknown function (DUF2172); Aminoglycoside 3-N-acetyltransferase; hypothetical protein 747076..748926 Calditerrivibrio nitroreducens DSM 19672 10008731 YP_004050795.1 CDS Calni_0721 NC_014758.1 748923 750212 D COGs: COG4310 Uncharacterized protein with an aminopeptidase-like domain; InterPro IPR019232: IPR012353; KEGG: gsu:GSU1966 hypothetical protein; PFAM: Protein of unknown function DUF2172, aminopeptidase-like; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF2172); hypothetical protein 748923..750212 Calditerrivibrio nitroreducens DSM 19672 10008732 YP_004050796.1 CDS Calni_0722 NC_014758.1 750205 750762 D COGs: COG1670 acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR020036: IPR000182; KEGG: hpj:jhp0310 flagellar biosynthesis protein; PFAM: GCN5-related N-acetyltransferase; SPTR: FLAGELLAR BIOSYNTHESIS PROTEIN; TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; PFAM: acetyltransferase (GNAT) family; TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; pseudaminic acid biosynthesis n-acetyl transferase 750205..750762 Calditerrivibrio nitroreducens DSM 19672 10008733 YP_004050797.1 CDS Calni_0723 NC_014758.1 750740 751771 D COGs: COG2089 Sialic acid synthase; InterPro IPR020030: IPR013132: IPR013974: IPR006190; KEGG: hth:HTH_1538 sialic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acetylneuraminate synthase; SPTR: Sialic acid synthase; TIGRFAM: pseudaminic acid synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase; n-acetylneuraminate synthase 750740..751771 Calditerrivibrio nitroreducens DSM 19672 10008734 YP_004050798.1 CDS Calni_0724 NC_014758.1 751855 753732 D COGs: COG2604 conserved hypothetical protein; InterPro IPR002826; KEGG: dap:Dacet_0453 hypothetical protein; PFAM: protein of unknown function DUF115; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF115; hypothetical protein 751855..753732 Calditerrivibrio nitroreducens DSM 19672 10008735 YP_004050799.1 CDS Calni_0725 NC_014758.1 754039 755145 R COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: swo:Swol_0155 hypothetical protein; PFAM: transposase mutator type; SPTR: Transposase, Mutator family; PFAM: Transposase, Mutator family; transposase mutator type complement(754039..755145) Calditerrivibrio nitroreducens DSM 19672 10008736 YP_004050800.1 CDS Calni_0726 NC_014758.1 755337 756446 D COGs: COG1817 conserved hypothetical protein; InterPro IPR007152; KEGG: sdl:Sdel_2214 protein of unknown function DUF354; PFAM: protein of unknown function DUF354; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF354); hypothetical protein 755337..756446 Calditerrivibrio nitroreducens DSM 19672 10008737 YP_004050801.1 CDS Calni_0727 NC_014758.1 756456 758684 R COGs: COG0068 Hydrogenase maturation factor; InterPro IPR004421: IPR001792: IPR011125: IPR006070: IPR 017968; KEGG: ddf:DEFDS_1539 Ni-Fe hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; SPTR: Ni-Fe hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; (nife) hydrogenase maturation protein hypf complement(756456..758684) Calditerrivibrio nitroreducens DSM 19672 10008738 YP_004050802.1 CDS Calni_0728 NC_014758.1 758688 759425 R COGs: COG4123 O-methyltransferase; InterPro IPR003402: IPR002052; KEGG: dap:Dacet_0890 methyltransferase small; PFAM: protein of unknown function Met10; SPTR: Methyltransferase small; PFAM: Methyltransferase small domain; hypothetical protein complement(758688..759425) Calditerrivibrio nitroreducens DSM 19672 10008739 YP_004050803.1 CDS Calni_0729 NC_014758.1 759427 760224 R COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593: IPR003439: IPR017871; KEGG: dap:Dacet_1780 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; ABC transporter complement(759427..760224) Calditerrivibrio nitroreducens DSM 19672 10008740 YP_004050804.1 CDS Calni_0730 NC_014758.1 760228 761517 R COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863: IPR001431; KEGG: ddf:DEFDS_0496 peptidase M16 family; PFAM: peptidase M16 domain protein; SPTR: Peptidase, M16 family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase m16 domain-containing protein complement(760228..761517) Calditerrivibrio nitroreducens DSM 19672 10008741 YP_004050805.1 CDS Calni_0731 NC_014758.1 761533 766224 R COGs: COG2902 NAD-specific glutamate dehydrogenase; InterPro IPR007780; KEGG: ddf:DEFDS_1921 NAD-glutamate dehydrogenase; PFAM: NAD-glutamate dehydrogenase; SPTR: NAD-glutamate dehydrogenase; PFAM: Bacterial NAD-glutamate dehydrogenase; nad-glutamate dehydrogenase complement(761533..766224) Calditerrivibrio nitroreducens DSM 19672 10008742 YP_004050806.1 CDS Calni_0732 NC_014758.1 766248 767579 R COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302; KEGG: dap:Dacet_1216 malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: malic protein domain protein; malic protein NAD-binding; SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating); PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; malic protein domain-containing protein complement(766248..767579) Calditerrivibrio nitroreducens DSM 19672 10008743 YP_004050807.1 CDS Calni_0733 NC_014758.1 767736 768320 R InterPro IPR000086; KEGG: ddf:DEFDS_1922 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; nudix hydrolase complement(767736..768320) Calditerrivibrio nitroreducens DSM 19672 10008744 YP_004050808.1 CDS Calni_0734 NC_014758.1 768313 768600 R KEGG: ddf:DEFDS_1923 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(768313..768600) Calditerrivibrio nitroreducens DSM 19672 10008745 YP_004050809.1 CDS Calni_0735 NC_014758.1 768687 769517 R COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: dba:Dbac_1997 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB domain protein; PFAM: OmpA family; ompa/motb domain-containing protein complement(768687..769517) Calditerrivibrio nitroreducens DSM 19672 10008746 YP_004050810.1 CDS Calni_0736 NC_014758.1 769527 770381 R COGs: COG1291 Flagellar motor component; InterPro IPR000540; KEGG: tye:THEYE_A0813 lateral flagellar motor protein MotA; SPTR: Lateral flagellar motor protein MotA; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: flagellar motor stator protein MotA; lateral flagellar motor protein mota complement(769527..770381) Calditerrivibrio nitroreducens DSM 19672 10008747 YP_004050811.1 CDS Calni_0737 NC_014758.1 770524 771078 D COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: ddf:DEFDS_1131 hypothetical protein; PFAM: LemA family protein; SPTR: uncharacterized protein; PFAM: LemA family; lema family protein 770524..771078 Calditerrivibrio nitroreducens DSM 19672 10008748 YP_004050812.1 CDS Calni_0738 NC_014758.1 771131 772831 D COGs: COG4907 membrane protein; InterPro IPR018702; KEGG: ddf:DEFDS_1130 hypothetical protein; PFAM: Protein of unknown function DUF2207, membrane; SPTR: uncharacterized protein; PFAM: Predicted membrane protein (DUF2207); hypothetical protein 771131..772831 Calditerrivibrio nitroreducens DSM 19672 10008749 YP_004050813.1 CDS Calni_0739 NC_014758.1 772876 773715 D COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005793; KEGG: ddf:DEFDS_1129 hypothetical protein; PFAM: formyl transferase domain protein; SPTR: uncharacterized protein; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; formyl transferase domain-containing protein 772876..773715 Calditerrivibrio nitroreducens DSM 19672 10008750 YP_004050814.1 CDS Calni_0740 NC_014758.1 774000 775538 D InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_0353 hypothetical protein; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 774000..775538 Calditerrivibrio nitroreducens DSM 19672 10008751 YP_004050815.1 CDS Calni_0741 NC_014758.1 775766 776926 D COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR004636: IPR005814; KEGG: ddf:DEFDS_1629 acetylornithine transaminase; PFAM: aminotransferase class-III; PRIAM: acetylornithine transaminase; SPTR: acetylornithine transaminase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; acetylornithine and succinylornithine aminotransferase 775766..776926 Calditerrivibrio nitroreducens DSM 19672 10008752 YP_004050816.1 CDS Calni_0742 NC_014758.1 776923 777861 D COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR002292: IPR006132: IPR006131: IPR006130; KEGG: ddf:DEFDS_1628 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; PRIAM: Ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 776923..777861 Calditerrivibrio nitroreducens DSM 19672 10008753 YP_004050817.1 CDS Calni_0743 NC_014758.1 777858 779090 D COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518: IPR018223; KEGG: ddf:DEFDS_1627 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase 777858..779090 Calditerrivibrio nitroreducens DSM 19672 10008754 YP_004050818.1 CDS Calni_0744 NC_014758.1 779094 779972 D COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR002310: IPR006194; KEGG: ddf:DEFDS_0639 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; glycyl-tRNA synthetase subunit alpha 779094..779972 Calditerrivibrio nitroreducens DSM 19672 10008755 YP_004050819.1 CDS Calni_0745 NC_014758.1 780025 780693 R COGs: COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; InterPro IPR002818; KEGG: ddf:DEFDS_1436 sigma cross-reacting protein 27A; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Sigma cross-reacting protein 27A; PFAM: DJ-1/PfpI family; thij/pfpi domain-containing protein complement(780025..780693) Calditerrivibrio nitroreducens DSM 19672 10008756 YP_004050820.1 CDS Calni_0746 NC_014758.1 780711 782075 R COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR004572: IPR006076; KEGG: ddf:DEFDS_1356 protoporphyrinogen oxidase; PFAM: FAD dependent oxidoreductase; PRIAM: Protoporphyrinogen oxidase; SPTR: Protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase; protoporphyrinogen oxidase complement(780711..782075) Calditerrivibrio nitroreducens DSM 19672 10008757 YP_004050821.1 CDS Calni_0747 NC_014758.1 782140 782313 D KEGG: tye:THEYE_A0347 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 782140..782313 Calditerrivibrio nitroreducens DSM 19672 10008758 YP_004050822.1 CDS Calni_0748 NC_014758.1 782317 782808 D COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR003526: IPR020555; KEGG: dap:Dacet_2463 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase 782317..782808 Calditerrivibrio nitroreducens DSM 19672 10008759 YP_004050823.1 CDS Calni_0749 NC_014758.1 782795 783100 R KEGG: dap:Dacet_0906 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(782795..783100) Calditerrivibrio nitroreducens DSM 19672 10008760 YP_004050824.1 CDS Calni_0750 NC_014758.1 783197 783823 R COGs: COG0546 phosphatase; InterPro IPR006439: IPR005834; KEGG: sua:Saut_1020 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase complement(783197..783823) Calditerrivibrio nitroreducens DSM 19672 10008761 YP_004050825.1 CDS Calni_0751 NC_014758.1 783820 784302 R COGs: COG2606 conserved hypothetical protein; InterPro IPR004369: IPR007214; KEGG: glo:Glov_2948 YbaK/EbsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: YbaK/ebsC protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; ybak/ebsc protein complement(783820..784302) Calditerrivibrio nitroreducens DSM 19672 10008762 YP_004050826.1 CDS Calni_0752 NC_014758.1 784310 785077 R COGs: COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferase; InterPro IPR014816; KEGG: ddf:DEFDS_0605 tRNA (adenine-N(1)-)-methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit; PRIAM: tRNA (adenine-N(1)-)-methyltransferase; SPTR: tRNA (Adenine-N(1)-)-methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit; tRNA (adenine-58-n(1)-) methyltransferase complement(784310..785077) Calditerrivibrio nitroreducens DSM 19672 10008763 YP_004050827.1 CDS Calni_0753 NC_014758.1 785114 787060 R COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR005259: IPR014001: IPR001650: IPR011545: IPR 014021; KEGG: ddf:DEFDS_1551 primosomal replication factor Y; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Primosomal replication factor Y; TIGRFAM: primosomal protein N'; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; primosomal protein n' complement(785114..787060) Calditerrivibrio nitroreducens DSM 19672 10008764 YP_004050828.1 CDS Calni_0754 NC_014758.1 787064 788551 R COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: hch:HCH_05561 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:AMP phosphotransferase; hypothetical protein complement(787064..788551) Calditerrivibrio nitroreducens DSM 19672 10008765 YP_004050829.1 CDS Calni_0755 NC_014758.1 788640 789566 R COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283: IPR000728: IPR010918; KEGG: dap:Dacet_2993 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; PRIAM: Thiamine-phosphate kinase; SPTR: Thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase; thiamine-monophosphate kinase complement(788640..789566) Calditerrivibrio nitroreducens DSM 19672 10008766 YP_004050830.1 CDS Calni_0756 NC_014758.1 789570 790208 R COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733; KEGG: dap:Dacet_2992 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; SPTR: Thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; manually curated; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine-phosphate diphosphorylase complement(789570..790208) Calditerrivibrio nitroreducens DSM 19672 10008767 YP_004050831.1 CDS Calni_0757 NC_014758.1 790169 791446 R COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: ddf:DEFDS_1615 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; hydroxymethylpyrimidine synthase complement(790169..791446) Calditerrivibrio nitroreducens DSM 19672 10008768 YP_004050832.1 CDS Calni_0758 NC_014758.1 791713 793557 D COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR004404: IPR000581: IPR020558; KEGG: rpb:RPB_4066 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxyacid dehydratase 791713..793557 Calditerrivibrio nitroreducens DSM 19672 10008769 YP_004050833.1 CDS Calni_0759 NC_014758.1 793588 794649 R COGs: COG1377 Flagellar biosynthesis pathway component FlhB; InterPro IPR006136: IPR006135; KEGG: ddf:DEFDS_0413 flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; SPTR: Flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; flagellar biosynthetic protein flhb complement(793588..794649) Calditerrivibrio nitroreducens DSM 19672 10008770 YP_004050834.1 CDS Calni_0760 NC_014758.1 794649 795428 R COGs: COG1684 Flagellar biosynthesis pathway component FliR; InterPro IPR006303: IPR002010; KEGG: ddf:DEFDS_0412 flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; SPTR: Flagellar biosynthetic protein fliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; flagellar biosynthetic protein flir complement(794649..795428) Calditerrivibrio nitroreducens DSM 19672 10008771 YP_004050835.1 CDS Calni_0761 NC_014758.1 795434 796402 R COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135; KEGG: dap:Dacet_2754 dihydroorotate oxidase; PFAM: dihydroorotate oxidase; SPTR: Dihydroorotate oxidase; PFAM: Dihydroorotate dehydrogenase; dihydroorotate oxidase complement(795434..796402) Calditerrivibrio nitroreducens DSM 19672 10008772 YP_004050836.1 CDS Calni_0762 NC_014758.1 796547 799711 D COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000014: IPR000160: IPR001633: IPR013767; KEGG: nis:NIS_0136 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: uncharacterized protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; manually curated; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase with pas/pac sensor(s) 796547..799711 Calditerrivibrio nitroreducens DSM 19672 10008773 YP_004050837.1 CDS Calni_0763 NC_014758.1 799739 801553 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660: IPR004089: IPR004010: IPR004090; KEGG: ddf:DEFDS_0640 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: uncharacterized protein; PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer with cache sensor complement(799739..801553) Calditerrivibrio nitroreducens DSM 19672 10008774 YP_004050838.1 CDS Calni_0764 NC_014758.1 801554 801703 R KEGG: ddf:DEFDS_P172 methyl-accepting chemotaxis protein; SPTR: Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein complement(801554..801703) Calditerrivibrio nitroreducens DSM 19672 10008775 YP_004050839.1 CDS Calni_0765 NC_014758.1 802226 803473 R COGs: COG0282 Acetate kinase; InterPro IPR004372: IPR000890; KEGG: ddf:DEFDS_1816 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase complement(802226..803473) Calditerrivibrio nitroreducens DSM 19672 10008777 YP_004050840.1 CDS Calni_0766 NC_014758.1 803483 804469 R COGs: COG0280 Phosphotransacetylase; InterPro IPR004614: IPR002505: IPR012147; KEGG: ddf:DEFDS_1815 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; PRIAM: Phosphate acetyltransferase; SPTR: Phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; phosphotransacetylase complement(803483..804469) Calditerrivibrio nitroreducens DSM 19672 10008778 YP_004050841.1 CDS Calni_0767 NC_014758.1 804570 806456 R COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644: IPR000595: IPR005105: IPR018821; KEGG: dap:Dacet_1248 CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: protein of unknown function DUF294 nucleotidyltransferase; CBS domain containing protein; cyclic nucleotide-binding; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; SMART: CBS domain containing protein; SPTR: CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: CBS domain; nucleotidyltransferase substrate binding domain; Cyclic nucleotide-binding domain; nucleotidyltransferase DUF294; nucleotidyltransferase complement(804570..806456) Calditerrivibrio nitroreducens DSM 19672 10008779 YP_004050842.1 CDS Calni_0768 NC_014758.1 806858 807154 D COGs: COG3162 membrane protein; InterPro IPR007436; KEGG: dap:Dacet_1118 hypothetical protein; PFAM: protein of unknown function DUF485; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF485; hypothetical protein 806858..807154 Calditerrivibrio nitroreducens DSM 19672 10008780 YP_004050843.1 CDS Calni_0769 NC_014758.1 807173 808753 D COGs: COG4147 symporter; InterPro IPR019900: IPR001734: IPR018212; KEGG: dap:Dacet_1117 SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; sss sodium solute transporter superfamily 807173..808753 Calditerrivibrio nitroreducens DSM 19672 10008781 YP_004050844.1 CDS Calni_0770 NC_014758.1 808788 809375 R COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055: IPR013520; KEGG: ddf:DEFDS_1873 hypothetical protein; PFAM: Exonuclease RNase T and DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: uncharacterized protein; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA-directed DNA polymerase complement(808788..809375) Calditerrivibrio nitroreducens DSM 19672 10008782 YP_004050845.1 CDS Calni_0771 NC_014758.1 809365 810165 R COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR011530: IPR020598: IPR001737: IPR020596; KEGG: ddf:DEFDS_1874 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: Dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase complement(809365..810165) Calditerrivibrio nitroreducens DSM 19672 10008783 YP_004050846.1 CDS Calni_0772 NC_014758.1 810140 811081 R COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: ddf:DEFDS_1875 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase complement(810140..811081) Calditerrivibrio nitroreducens DSM 19672 10008784 YP_004050847.1 CDS Calni_0773 NC_014758.1 811191 812855 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006657; KEGG: ddf:DEFDS_1943 hypothetical protein; PFAM: molydopterin dinucleotide-binding region; SPTR: uncharacterized protein; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; molybdopterin dinucleotide-binding protein complement(811191..812855) Calditerrivibrio nitroreducens DSM 19672 10008785 YP_004050848.1 CDS Calni_0774 NC_014758.1 812862 814601 R InterPro IPR002482: IPR008258: IPR018392: IPR000189; KEGG: ddf:DEFDS_1862 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SPTR: Lytic transglycosylase, catalytic; PFAM: Transglycosylase SLT domain; LysM domain; lytic transglycosylase complement(812862..814601) Calditerrivibrio nitroreducens DSM 19672 10008786 YP_004050849.1 CDS Calni_0775 NC_014758.1 814752 815813 D COGs: COG3426 Butyrate kinase; InterPro IPR011245: IPR000890; KEGG: gem:GM21_1109 butyrate kinase; PFAM: acetate and butyrate kinase; SPTR: Butyrate kinase; TIGRFAM: butyrate kinase; PFAM: Acetokinase family; TIGRFAM: butyrate kinase; butyrate kinase 814752..815813 Calditerrivibrio nitroreducens DSM 19672 10008787 YP_004050850.1 CDS Calni_0776 NC_014758.1 815823 817307 D COGs: COG0280 Phosphotransacetylase; InterPro IPR013096: IPR002505; KEGG: gem:GM21_1110 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase; Cupin 2 conserved barrel domain protein; PRIAM: Phosphate butyryltransferase; SPTR: Phosphate butyryltransferase; PFAM: Cupin domain; Phosphate acetyl/butaryl transferase; phosphate butyryltransferase 815823..817307 Calditerrivibrio nitroreducens DSM 19672 10008788 YP_004050851.1 CDS Calni_0777 NC_014758.1 817409 818257 D COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127: IPR006129: IPR006128; KEGG: pdi:BDI_3081 zinc ABC transporter zinc-binding protein; PFAM: periplasmic solute binding protein; SPTR: zinc ABC transporter zinc-binding protein; PFAM: Periplasmic solute binding protein family; periplasmic solute binding protein 817409..818257 Calditerrivibrio nitroreducens DSM 19672 10008789 YP_004050852.1 CDS Calni_0778 NC_014758.1 818260 819003 D COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: drt:Dret_0026 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; ABC transporter 818260..819003 Calditerrivibrio nitroreducens DSM 19672 10008790 YP_004050853.1 CDS Calni_0779 NC_014758.1 819003 819806 D COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: dsa:Desal_1081 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein; PFAM: ABC 3 transport family; ABC-3 protein 819003..819806 Calditerrivibrio nitroreducens DSM 19672 10008791 YP_004050854.1 CDS Calni_0780 NC_014758.1 819793 820203 D COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: pmz:HMPREF0659_A7268 hypothetical protein; SPTR: uncharacterized protein; PFAM: Ferric uptake regulator family; hypothetical protein 819793..820203 Calditerrivibrio nitroreducens DSM 19672 10008792 YP_004050855.1 CDS Calni_0781 NC_014758.1 820179 820811 D COGs: COG0546 phosphatase; InterPro IPR006439: IPR005834; KEGG: ddf:DEFDS_1222 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase 820179..820811 Calditerrivibrio nitroreducens DSM 19672 10008793 YP_004050856.1 CDS Calni_0782 NC_014758.1 820824 822095 D COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: ddf:DEFDS_1223 N-ethylammeline chlorohydrolase; PFAM: amidohydrolase; SPTR: N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase family; amidohydrolase 820824..822095 Calditerrivibrio nitroreducens DSM 19672 10008794 YP_004050857.1 CDS Calni_0783 NC_014758.1 822071 823039 D COGs: COG0679 permease; InterPro IPR004776; KEGG: dae:Dtox_1678 auxin efflux carrier; PFAM: Auxin Efflux Carrier; SPTR: Auxin Efflux Carrier; PFAM: Membrane transport protein; auxin efflux carrier 822071..823039 Calditerrivibrio nitroreducens DSM 19672 10008795 YP_004050858.1 CDS Calni_0784 NC_014758.1 823043 823855 D COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: dap:Dacet_1136 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase 823043..823855 Calditerrivibrio nitroreducens DSM 19672 10008796 YP_004050859.1 CDS Calni_0785 NC_014758.1 823908 824795 D COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545: IPR001789; KEGG: ddf:DEFDS_0276 two-component system, chemotaxis family, response regulator CheV; PFAM: CheW domain protein; response regulator receiver; SMART: response regulator receiver; CheW domain protein; SPTR: Two-component system, chemotaxis family, response regulator CheV; PFAM: CheW-like domain; Response regulator receiver domain; response regulator receiver modulated chew protein 823908..824795 Calditerrivibrio nitroreducens DSM 19672 10008797 YP_004050860.1 CDS Calni_0786 NC_014758.1 824806 825570 D COGs: COG1729 conserved hypothetical protein; InterPro IPR014162: IPR019734: IPR001440: IPR013026; KEGG: ddf:DEFDS_0275 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: uncharacterized protein; TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide repeat; TIGRFAM: tol-pal system protein YbgF; tol-pal system protein ybgf 824806..825570 Calditerrivibrio nitroreducens DSM 19672 10008798 YP_004050861.1 CDS Calni_0787 NC_014758.1 825563 826618 D InterPro IPR002482: IPR018392; KEGG: ddf:DEFDS_0274 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: uncharacterized protein; PFAM: LysM domain; peptidoglycan-binding lysin domain 825563..826618 Calditerrivibrio nitroreducens DSM 19672 10008799 YP_004050862.1 CDS Calni_0788 NC_014758.1 827175 829511 D COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492: IPR001029; KEGG: ddf:DEFDS_2020 flagellin domain protein; PFAM: flagellin domain protein; SPTR: Flagellin domain protein; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin domain-containing protein 827175..829511 Calditerrivibrio nitroreducens DSM 19672 10008801 YP_004050863.1 CDS Calni_0789 NC_014758.1 829576 829920 D InterPro IPR005186; KEGG: ddf:DEFDS_2019 flagellar protein FlaG; PFAM: flagellar protein FlaG protein; SPTR: Flagellar protein FlaG; PFAM: FlaG protein; flagellar protein flag protein 829576..829920 Calditerrivibrio nitroreducens DSM 19672 10008802 YP_004050864.1 CDS Calni_0790 NC_014758.1 830546 832168 R COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089: IPR004090; KEGG: tye:THEYE_A0440 methyl-accepting chemotaxis transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer complement(830546..832168) Calditerrivibrio nitroreducens DSM 19672 10008804 YP_004050865.1 CDS Calni_0791 NC_014758.1 832179 832538 R KEGG: dap:Dacet_1785 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(832179..832538) Calditerrivibrio nitroreducens DSM 19672 10008805 YP_004050866.1 CDS Calni_0792 NC_014758.1 832583 833221 D COGs: COG2231 Uncharacterized protein related to Endonuclease III; InterPro IPR003265; KEGG: ddf:DEFDS_0818 endonuclease III; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: Endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; hhh-gpd family protein 832583..833221 Calditerrivibrio nitroreducens DSM 19672 10008806 YP_004050867.1 CDS Calni_0793 NC_014758.1 833666 834661 D COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003661: IPR003594: IPR004358: IPR005467; KEGG: slt:Slit_1327 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 833666..834661 Calditerrivibrio nitroreducens DSM 19672 10008808 YP_004050868.1 CDS Calni_0794 NC_014758.1 834651 835082 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: mei:Msip34_2210 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein 834651..835082 Calditerrivibrio nitroreducens DSM 19672 10008809 YP_004050869.1 CDS Calni_0795 NC_014758.1 835084 837033 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR000014: IPR001789: IPR003661: IPR003594: IPR 013767: IPR004358: IPR005467; KEGG: gme:Gmet_1918 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; pas/pac sensor hybrid histidine kinase 835084..837033 Calditerrivibrio nitroreducens DSM 19672 10008810 YP_004050870.1 CDS Calni_0796 NC_014758.1 837053 838225 D COGs: COG1639 signal transduction protein; InterPro IPR001789: IPR013976; KEGG: csc:Csac_1329 response regulator receiver protein; PFAM: response regulator receiver; Metal-dependent hydrolase HDOD; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; HDOD domain; response regulator receiver modulated metal dependent hydrolase 837053..838225 Calditerrivibrio nitroreducens DSM 19672 10008811 YP_004050871.1 CDS Calni_0797 NC_014758.1 838228 838908 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: tmt:Tmath_1814 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein 838228..838908 Calditerrivibrio nitroreducens DSM 19672 10008812 YP_004050872.1 CDS Calni_0798 NC_014758.1 838901 839413 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: gme:Gmet_3472 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver domain protein (CheY-like); PFAM: Response regulator receiver domain; response regulator receiver protein 838901..839413 Calditerrivibrio nitroreducens DSM 19672 10008813 YP_004050873.1 CDS Calni_0799 NC_014758.1 839414 841033 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594: IPR001789: IPR004358: IPR005467; KEGG: tit:Thit_1844 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver; SPTR: Multi-sensor signal transduction histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; histidine kinase 839414..841033 Calditerrivibrio nitroreducens DSM 19672 10008814 YP_004050874.1 CDS Calni_0800 NC_014758.1 841020 843440 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR000014: IPR001610: IPR003594: IPR001789: IPR 013767: IPR004358: IPR005467: IPR000700; KEGG: cts:Ctha_0490 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; pas/pac sensor hybrid histidine kinase 841020..843440 Calditerrivibrio nitroreducens DSM 19672 10008815 YP_004050875.1 CDS Calni_0801 NC_014758.1 843677 845341 D COGs: COG2200 FOG: EAL domain; InterPro IPR000014: IPR000160: IPR001633: IPR013767: IPR 000700; KEGG: ddf:DEFDS_1853 signal transduction sensor histidine kinase/response regulator; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: Signal transduction sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase with pas/pac sensor(s) 843677..845341 Calditerrivibrio nitroreducens DSM 19672 10008816 YP_004050876.1 CDS Calni_0802 NC_014758.1 845434 845940 R InterPro IPR003251; KEGG: ddf:DEFDS_0342 rubrerythrin domain protein; PFAM: Rubrerythrin; SPTR: Rubrerythrin domain protein; PFAM: Rubrerythrin; rubrerythrin complement(845434..845940) Calditerrivibrio nitroreducens DSM 19672 10008817 YP_004050877.1 CDS Calni_0803 NC_014758.1 846075 847382 D COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ddf:DEFDS_0343 aminotransferase I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase, I and II; PFAM: Aminotransferase class I and II; aminotransferase class i and ii 846075..847382 Calditerrivibrio nitroreducens DSM 19672 10008818 YP_004050878.1 CDS Calni_0804 NC_014758.1 847431 848027 D InterPro IPR019870: IPR001455; KEGG: ddf:DEFDS_0344 hypothetical protein; PFAM: SirA-like domain-containing protein; SPTR: uncharacterized protein; TIGRFAM: selenium metabolism protein YedF; PFAM: DsrE/DsrF-like family; SirA-like protein; TIGRFAM: selenium metabolism protein YedF; selenium metabolism protein yedf 847431..848027 Calditerrivibrio nitroreducens DSM 19672 10008819 YP_004050879.1 CDS Calni_0805 NC_014758.1 848041 849069 D COGs: COG0709 Selenophosphate synthase; Contains Selenocysteine; InterPro IPR004536: IPR000728: IPR010918; KEGG: ddf:DEFDS_0345 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; SPTR: Selenide, water dikinase; TIGRFAM: selenide, water dikinase; manually curated; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; selenide, water dikinase 848041..849069 Calditerrivibrio nitroreducens DSM 19672 10008820 YP_004050880.1 CDS Calni_0806 NC_014758.1 849171 849773 D InterPro IPR001387: IPR013096; KEGG: ddf:DEFDS_0680 transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix; helix-turn-helix domain-containing protein 849171..849773 Calditerrivibrio nitroreducens DSM 19672 10008821 YP_004050881.1 CDS Calni_0807 NC_014758.1 849837 850232 D InterPro IPR005503; KEGG: tpd:Teth39_1246 flagellar basal body-associated protein FliL; PFAM: flagellar basal body-associated protein FliL; SPTR: Flagellar basal body-associated protein FliL; PFAM: Flagellar basal body-associated protein FliL; flagellar basal body-associated protein flil 849837..850232 Calditerrivibrio nitroreducens DSM 19672 10008822 YP_004050882.1 CDS Calni_0808 NC_014758.1 850317 850967 D COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; KEGG: ddf:DEFDS_1625 cytoplasmic chaperone TorD; SPTR: Cytoplasmic chaperone TorD; PFAM: Nitrate reductase delta subunit; cytoplasmic chaperone tord 850317..850967 Calditerrivibrio nitroreducens DSM 19672 10008823 YP_004050883.1 CDS Calni_0809 NC_014758.1 851031 851336 D KEGG: ddf:DEFDS_1624 cytochrome c family protein; SPTR: Cytochrome c family protein; cytochrome c family protein 851031..851336 Calditerrivibrio nitroreducens DSM 19672 10008824 YP_004050884.1 CDS Calni_0810 NC_014758.1 851499 853172 D KEGG: ddf:DEFDS_1623 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3373); hypothetical protein 851499..853172 Calditerrivibrio nitroreducens DSM 19672 10008825 YP_004050885.1 CDS Calni_0811 NC_014758.1 853571 854677 D COGs: COG4314 lipoprotein involved in nitrous oxide reduction; KEGG: sdl:Sdel_2169 hypothetical protein; SPTR: uncharacterized protein; PFAM: NosL; hypothetical protein 853571..854677 Calditerrivibrio nitroreducens DSM 19672 10008826 YP_004050886.1 CDS Calni_0812 NC_014758.1 854755 855054 D KEGG: sdl:Sdel_2174 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 854755..855054 Calditerrivibrio nitroreducens DSM 19672 10008827 YP_004050887.1 CDS Calni_0813 NC_014758.1 855051 856238 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: tdn:Suden_1316 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: ABC transporter, permease protein; PFAM: Predicted permease; hypothetical protein 855051..856238 Calditerrivibrio nitroreducens DSM 19672 10008828 YP_004050888.1 CDS Calni_0814 NC_014758.1 856235 856888 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: sua:Saut_1420 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); ABC transporter 856235..856888 Calditerrivibrio nitroreducens DSM 19672 10008829 YP_004050889.1 CDS Calni_0815 NC_014758.1 856885 857859 D KEGG: sua:Saut_1419 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 856885..857859 Calditerrivibrio nitroreducens DSM 19672 10008830 YP_004050890.1 CDS Calni_0816 NC_014758.1 857844 858269 D KEGG: dap:Dacet_1548 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 857844..858269 Calditerrivibrio nitroreducens DSM 19672 10008831 YP_004050891.1 CDS Calni_0817 NC_014758.1 858325 858759 D COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ddf:DEFDS_1618 Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (transcriptional regulator); BadM/Rrf2 family transcriptional regulator 858325..858759 Calditerrivibrio nitroreducens DSM 19672 10008832 YP_004050892.1 CDS Calni_0818 NC_014758.1 858752 860164 D COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: dap:Dacet_1538 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome-c oxidase 858752..860164 Calditerrivibrio nitroreducens DSM 19672 10008833 YP_004050893.1 CDS Calni_0819 NC_014758.1 860175 861056 D COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR003088: IPR009056; KEGG: dap:Dacet_1539 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I; SPTR: Cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome c; Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit ii 860175..861056 Calditerrivibrio nitroreducens DSM 19672 10008834 YP_004050894.1 CDS Calni_0820 NC_014758.1 861066 861260 D KEGG: dap:Dacet_1540 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 861066..861260 Calditerrivibrio nitroreducens DSM 19672 10008835 YP_004050895.1 CDS Calni_0821 NC_014758.1 861307 861453 D KEGG: ank:AnaeK_1233 hypothetical protein; SPTR: uncharacterized protein; PFAM: Cbb3-type cytochrome oxidase component FixQ; hypothetical protein 861307..861453 Calditerrivibrio nitroreducens DSM 19672 10008836 YP_004050896.1 CDS Calni_0822 NC_014758.1 861446 862666 D COGs: COG0348 Polyferredoxin; InterPro IPR017900: IPR017896; KEGG: dap:Dacet_1542 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; 4fe-4S ferredoxin iron-sulfur binding domain-containing protein 861446..862666 Calditerrivibrio nitroreducens DSM 19672 10008837 YP_004050897.1 CDS Calni_0823 NC_014758.1 862663 863082 D KEGG: dap:Dacet_1543 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 862663..863082 Calditerrivibrio nitroreducens DSM 19672 10008838 YP_004050898.1 CDS Calni_0824 NC_014758.1 863175 863321 D InterPro IPR004714; KEGG: hna:Hneap_1052 cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; SPTR: Cytochrome oxidase maturation protein, Cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; manually curated; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 863175..863321 Calditerrivibrio nitroreducens DSM 19672 10008839 YP_004050899.1 CDS Calni_0825 NC_014758.1 863308 865758 D COGs: COG2217 Cation transport ATPase; InterPro IPR006403: IPR006416: IPR001757: IPR006121: IPR 008250: IPR005834: IPR018303: IPR000150; KEGG: dap:Dacet_1545 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating p-type atpase 863308..865758 Calditerrivibrio nitroreducens DSM 19672 10008840 YP_004050900.1 CDS Calni_0826 NC_014758.1 865733 866386 R COGs: COG2836 conserved hypothetical protein; KEGG: dap:Dacet_1547 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(865733..866386) Calditerrivibrio nitroreducens DSM 19672 10008841 YP_004050901.1 CDS Calni_0827 NC_014758.1 866565 869186 R COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR002318: IPR018164: IPR012947: IPR003156: IPR 018165; KEGG: ddf:DEFDS_1463 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; SPTR: Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase complement(866565..869186) Calditerrivibrio nitroreducens DSM 19672 10008842 YP_004050902.1 CDS Calni_0828 NC_014758.1 869197 869496 R InterPro IPR003615: IPR002711; KEGG: gme:Gmet_0936 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease; PFAM: HNH endonuclease; hnh endonuclease complement(869197..869496) Calditerrivibrio nitroreducens DSM 19672 10008843 YP_004050903.1 CDS Calni_0829 NC_014758.1 869582 871177 D COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR001272; KEGG: ddf:DEFDS_1461 phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP); SPTR: Phosphoenolpyruvate carboxykinase [ATP]; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase 869582..871177 Calditerrivibrio nitroreducens DSM 19672 10008844 YP_004050904.1 CDS Calni_0830 NC_014758.1 871220 872236 R COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013023: IPR013116: IPR000506; KEGG: ddf:DEFDS_1665 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase complement(871220..872236) Calditerrivibrio nitroreducens DSM 19672 10008845 YP_004050905.1 CDS Calni_0831 NC_014758.1 872240 872764 R COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789: IPR002912: IPR019455; KEGG: ddf:DEFDS_1666 acetolactate synthase small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit complement(872240..872764) Calditerrivibrio nitroreducens DSM 19672 10008846 YP_004050906.1 CDS Calni_0832 NC_014758.1 872766 874463 R COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012846: IPR012001: IPR012000: IPR011766: IPR 000399; KEGG: ddf:DEFDS_1667 acetolactate synthase large subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; SPTR: Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit complement(872766..874463) Calditerrivibrio nitroreducens DSM 19672 10008847 YP_004050907.1 CDS Calni_0833 NC_014758.1 874648 875841 D COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR003583: IPR007197; KEGG: hya:HY04AAS1_0393 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: Radical SAM domain protein; radical SAM domain-containing protein 874648..875841 Calditerrivibrio nitroreducens DSM 19672 10008848 YP_004050908.1 CDS Calni_0834 NC_014758.1 875841 876560 D KEGG: fnu:FN0953 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 875841..876560 Calditerrivibrio nitroreducens DSM 19672 10008849 YP_004050909.1 CDS Calni_0835 NC_014758.1 876602 877816 D COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: dvm:DvMF_2954 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: uncharacterized protein; PFAM: Predicted permease; hypothetical protein 876602..877816 Calditerrivibrio nitroreducens DSM 19672 10008850 YP_004050910.1 CDS Calni_0836 NC_014758.1 877820 879040 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: pmx:PERMA_1485 macrolide export ATP-binding/permease protein MacB; PFAM: protein of unknown function DUF214; SPTR: Macrolide export ATP-binding/permease protein MacB; PFAM: Predicted permease; hypothetical protein 877820..879040 Calditerrivibrio nitroreducens DSM 19672 10008851 YP_004050911.1 CDS Calni_0837 NC_014758.1 879049 880353 R COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: saf:SULAZ_0339 VI polysaccharide biosynthesis protein VipA/TviB; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: VI polysaccharide biosynthesis protein VipA/tviB; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(879049..880353) Calditerrivibrio nitroreducens DSM 19672 10008852 YP_004050912.1 CDS Calni_0838 NC_014758.1 880361 880609 R KEGG: llo:LLO_0838 membrane protein; SPTR: membrane protein; hypothetical protein complement(880361..880609) Calditerrivibrio nitroreducens DSM 19672 10008853 YP_004050913.1 CDS Calni_0839 NC_014758.1 880590 881426 R COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR003141: IPR004013; KEGG: ddf:DEFDS_1471 hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: uncharacterized protein; PFAM: PHP domain; php domain-containing protein complement(880590..881426) Calditerrivibrio nitroreducens DSM 19672 10008854 YP_004050914.1 CDS Calni_0840 NC_014758.1 881473 881853 D COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: ddf:DEFDS_0628 hypothetical protein; PFAM: membrane protein of unknown function; SPTR: uncharacterized protein; PFAM: Membrane protein of unknown function; hypothetical protein 881473..881853 Calditerrivibrio nitroreducens DSM 19672 10008855 YP_004050915.1 CDS Calni_0841 NC_014758.1 881856 882362 D KEGG: ddf:DEFDS_0629 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 881856..882362 Calditerrivibrio nitroreducens DSM 19672 10008856 YP_004050916.1 CDS Calni_0842 NC_014758.1 882359 882643 D COGs: COG4517 conserved hypothetical protein; KEGG: ddf:DEFDS_0630 hypothetical protein; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1820); hypothetical protein 882359..882643 Calditerrivibrio nitroreducens DSM 19672 10008857 YP_004050917.1 CDS Calni_0843 NC_014758.1 882636 883673 D COGs: COG0795 permease; InterPro IPR005495; KEGG: ddf:DEFDS_0631 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: uncharacterized protein; PFAM: Predicted permease YjgP/YjgQ family; permease yjgp/yjgq family protein 882636..883673 Calditerrivibrio nitroreducens DSM 19672 10008858 YP_004050918.1 CDS Calni_0844 NC_014758.1 883670 884764 D COGs: COG0795 permease; InterPro IPR005495; KEGG: ddf:DEFDS_0632 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: uncharacterized protein; PFAM: Predicted permease YjgP/YjgQ family; permease yjgp/yjgq family protein 883670..884764 Calditerrivibrio nitroreducens DSM 19672 10008859 YP_004050919.1 CDS Calni_0845 NC_014758.1 884799 885239 R COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: ddf:DEFDS_0517 universal stress protein; PFAM: UspA domain-containing protein; SPTR: Universal stress protein; PFAM: Universal stress protein family; uspa domain-containing protein complement(884799..885239) Calditerrivibrio nitroreducens DSM 19672 10008860 YP_004050920.1 CDS Calni_0846 NC_014758.1 885513 886769 D COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: ddf:DEFDS_1937 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain; rhodanese domain-containing protein 885513..886769 Calditerrivibrio nitroreducens DSM 19672 10008861 YP_004050921.1 CDS Calni_0847 NC_014758.1 886829 889996 R COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680: IPR018391: IPR019781: IPR011600: IPR 019775: IPR020472: IPR019782: IPR017986; KEGG: ddf:DEFDS_0903 hypothetical protein; PFAM: WD40 repeat, subgroup; peptidase C14 caspase catalytic subunit p20; SMART: WD-40 repeat-containing protein; Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: uncharacterized protein; PFAM: Caspase domain; WD domain, G-beta repeat; wd40 repeat, subgroup complement(886829..889996) Calditerrivibrio nitroreducens DSM 19672 10008862 YP_004050922.1 CDS Calni_0848 NC_014758.1 890011 891243 R COGs: COG4826 Serine protease inhibitor; InterPro IPR000215; KEGG: mpi:Mpet_1013 proteinase inhibitor I4 serpin; PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; SPTR: Non-specific serine/threonine protein kinase; PFAM: Serpin (serine protease inhibitor); proteinase inhibitor i4 serpin complement(890011..891243) Calditerrivibrio nitroreducens DSM 19672 10008863 YP_004050923.1 CDS Calni_0849 NC_014758.1 891263 891622 R KEGG: gka:GK0718 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(891263..891622) Calditerrivibrio nitroreducens DSM 19672 10008864 YP_004050924.1 CDS Calni_0850 NC_014758.1 891711 893699 R KEGG: tye:THEYE_A1911 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(891711..893699) Calditerrivibrio nitroreducens DSM 19672 10008865 YP_004050925.1 CDS Calni_0851 NC_014758.1 893715 897008 R COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680: IPR019781: IPR011600: IPR019775: IPR 019782: IPR017986; KEGG: ddf:DEFDS_0903 hypothetical protein; PFAM: WD40 repeat, subgroup; peptidase C14 caspase catalytic subunit p20; SMART: WD-40 repeat-containing protein; SPTR: uncharacterized protein; PFAM: Caspase domain; WD domain, G-beta repeat; wd40 repeat, subgroup complement(893715..897008) Calditerrivibrio nitroreducens DSM 19672 10008866 YP_004050926.1 CDS Calni_0852 NC_014758.1 897059 897817 R KEGG: ser:SERP2443 lipoprotein; SPTR: uncharacterized protein; hypothetical protein complement(897059..897817) Calditerrivibrio nitroreducens DSM 19672 10008867 YP_004050927.1 CDS Calni_0853 NC_014758.1 897832 899064 R COGs: COG4826 Serine protease inhibitor; InterPro IPR000215; KEGG: mpi:Mpet_1013 proteinase inhibitor I4 serpin; PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; SPTR: Non-specific serine/threonine protein kinase; PFAM: Serpin (serine protease inhibitor); proteinase inhibitor i4 serpin complement(897832..899064) Calditerrivibrio nitroreducens DSM 19672 10008868 YP_004050928.1 CDS Calni_0854 NC_014758.1 899084 899479 R KEGG: tye:THEYE_A1912 lipoprotein, putative; SPTR: Lipoprotein, putative; hypothetical protein complement(899084..899479) Calditerrivibrio nitroreducens DSM 19672 10008869 YP_004050929.1 CDS Calni_0855 NC_014758.1 899668 899961 R KEGG: sul:SYO3AOP1_1414 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(899668..899961) Calditerrivibrio nitroreducens DSM 19672 10008870 YP_004050930.1 CDS Calni_0856 NC_014758.1 900100 901140 R KEGG: tye:THEYE_A1910 hypothetical protein; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2330); hypothetical protein complement(900100..901140) Calditerrivibrio nitroreducens DSM 19672 10008871 YP_004050931.1 CDS Calni_0857 NC_014758.1 901181 902587 R COGs: COG4249 Uncharacterized protein containing caspase domain; InterPro IPR011600; KEGG: tye:THEYE_A1905 polysaccharide deacetylase, putative; PFAM: peptidase C14 caspase catalytic subunit p20; SPTR: Polysaccharide deacetylase, putative; PFAM: Caspase domain; peptidase c14 caspase catalytic subunit p20 complement(901181..902587) Calditerrivibrio nitroreducens DSM 19672 10008872 YP_004050932.1 CDS Calni_0858 NC_014758.1 902618 903451 R KEGG: tye:THEYE_A1907 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF400; hypothetical protein complement(902618..903451) Calditerrivibrio nitroreducens DSM 19672 10008873 YP_004050933.1 CDS Calni_0859 NC_014758.1 903492 906365 R COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680: IPR019781: IPR002372: IPR011600: IPR 019775: IPR019782: IPR017986; KEGG: dma:DMR_25970 hypothetical protein; PFAM: WD40 repeat, subgroup; Pyrrolo-quinoline quinone repeat-containing protein; peptidase C14 caspase catalytic subunit p20; SMART: WD-40 repeat-containing protein; SPTR: Peptidase C14 caspase catalytic subunit p20; PFAM: Caspase domain; WD domain, G-beta repeat; wd40 repeat, subgroup complement(903492..906365) Calditerrivibrio nitroreducens DSM 19672 10008874 YP_004050934.1 CDS Calni_0860 NC_014758.1 906654 907466 R COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ddf:DEFDS_0133 peptide/nickel ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Peptide/nickel ABC transporter, permease; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(906654..907466) Calditerrivibrio nitroreducens DSM 19672 10008875 YP_004050935.1 CDS Calni_0861 NC_014758.1 907450 908433 R COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ddf:DEFDS_0132 peptide/nickel ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Peptide/nickel ABC transporter, permease; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(907450..908433) Calditerrivibrio nitroreducens DSM 19672 10008876 YP_004050936.1 CDS Calni_0862 NC_014758.1 908436 910061 R COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: ddf:DEFDS_0131 peptide/nickel ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Peptide/nickel ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; family 5 extracellular solute-binding protein complement(908436..910061) Calditerrivibrio nitroreducens DSM 19672 10008877 YP_004050937.1 CDS Calni_0863 NC_014758.1 910083 910403 R InterPro IPR004692; KEGG: ddf:DEFDS_0130 preprotein translocase subunit G; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase subunit G; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; preprotein translocase, secg subunit complement(910083..910403) Calditerrivibrio nitroreducens DSM 19672 10008878 YP_004050938.1 CDS Calni_0864 NC_014758.1 910486 910896 R COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: ddf:DEFDS_0853 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: uncharacterized protein; PFAM: CBS domain; CBS domain-containing membrane protein complement(910486..910896) Calditerrivibrio nitroreducens DSM 19672 10008879 YP_004050939.1 CDS Calni_0865 NC_014758.1 910909 912783 R COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: dap:Dacet_1247 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; amp-dependent synthetase and ligase complement(910909..912783) Calditerrivibrio nitroreducens DSM 19672 10008880 YP_004050940.1 CDS Calni_0866 NC_014758.1 912894 914099 D InterPro IPR004664; KEGG: dap:Dacet_2283 cyclic nucleotide-binding protein; PFAM: ribonuclease BN; SPTR: Cyclic nucleotide-binding protein; PFAM: Ribonuclease BN-like family; ribonuclease bn 912894..914099 Calditerrivibrio nitroreducens DSM 19672 10008881 YP_004050941.1 CDS Calni_0867 NC_014758.1 914210 915535 D COGs: COG0460 Homoserine dehydrogenase; InterPro IPR005106: IPR001342: IPR002912: IPR016204: IPR 019811; KEGG: ddf:DEFDS_1176 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; SPTR: Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain; homoserine dehydrogenase 914210..915535 Calditerrivibrio nitroreducens DSM 19672 10008882 YP_004050942.1 CDS Calni_0868 NC_014758.1 915537 916703 D COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR013371: IPR004456: IPR019304: IPR006124; KEGG: ddf:DEFDS_1177 phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme superfamily; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase; phosphoglycerate mutase 915537..916703 Calditerrivibrio nitroreducens DSM 19672 10008883 YP_004050943.1 CDS Calni_0869 NC_014758.1 916714 917943 D COGs: COG0527 Aspartokinase; InterPro IPR005260: IPR001341: IPR001048: IPR002912: IPR 018042: IPR001057; KEGG: ddf:DEFDS_1178 aspartate kinase monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; aspartate kinase 916714..917943 Calditerrivibrio nitroreducens DSM 19672 10008884 YP_004050944.1 CDS Calni_0870 NC_014758.1 917933 919510 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR005675: IPR000891: IPR013709: IPR002034; KEGG: ddf:DEFDS_1179 2-isopropylmalate synthase; PFAM: LeuA allosteric (dimerisation) domain-containing protein; pyruvate carboxyltransferase; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; (r)-citramalate synthase 917933..919510 Calditerrivibrio nitroreducens DSM 19672 10008885 YP_004050945.1 CDS Calni_0871 NC_014758.1 919566 921356 R COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004524: IPR004365: IPR004364: IPR004115: IPR 002312: IPR006195; KEGG: ddf:DEFDS_1552 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase complement(919566..921356) Calditerrivibrio nitroreducens DSM 19672 10008886 YP_004050946.1 CDS Calni_0872 NC_014758.1 921378 922622 R COGs: COG0124 Histidyl-tRNA synthetase; InterPro IPR015807: IPR002314: IPR004154: IPR004516: IPR 006195; KEGG: ddf:DEFDS_1553 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(921378..922622) Calditerrivibrio nitroreducens DSM 19672 10008887 YP_004050947.1 CDS Calni_0873 NC_014758.1 922682 923377 R COGs: COG1102 Cytidylate kinase; KEGG: ddf:DEFDS_1510 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(922682..923377) Calditerrivibrio nitroreducens DSM 19672 10008888 YP_004050948.1 CDS Calni_0874 NC_014758.1 923368 923862 R COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: dap:Dacet_1438 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inepyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(923368..923862) Calditerrivibrio nitroreducens DSM 19672 10008889 YP_004050949.1 CDS Calni_0875 NC_014758.1 923865 925250 R COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR004099: IPR000815; KEGG: dap:Dacet_1440 pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; pyridine nucleotide-disulfide oxidoreductase dimerization subunit complement(923865..925250) Calditerrivibrio nitroreducens DSM 19672 10008890 YP_004050950.1 CDS Calni_0876 NC_014758.1 925275 926429 R COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: ddf:DEFDS_1515 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; methionine adenosyltransferase complement(925275..926429) Calditerrivibrio nitroreducens DSM 19672 10008891 YP_004050951.1 CDS Calni_0877 NC_014758.1 926431 926664 R KEGG: ddf:DEFDS_1516 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(926431..926664) Calditerrivibrio nitroreducens DSM 19672 10008892 YP_004050952.1 CDS Calni_0878 NC_014758.1 926651 927109 R COGs: COG0456 acetyltransferase; InterPro IPR006464: IPR000182; KEGG: ddf:DEFDS_1517 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(926651..927109) Calditerrivibrio nitroreducens DSM 19672 10008893 YP_004050953.1 CDS Calni_0879 NC_014758.1 927090 927659 R COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR000905; KEGG: ddf:DEFDS_1518 glycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; SPTR: Glycoprotein endopeptidase; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; peptidase m22 glycoprotease complement(927090..927659) Calditerrivibrio nitroreducens DSM 19672 10008894 YP_004050954.1 CDS Calni_0880 NC_014758.1 927772 928191 D COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: ddf:DEFDS_1845 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; hypothetical protein 927772..928191 Calditerrivibrio nitroreducens DSM 19672 10008895 YP_004050955.1 CDS Calni_0881 NC_014758.1 928203 929045 D COGs: COG2404 phosphohydrolase (DHH superfamily); InterPro IPR003156; KEGG: ddf:DEFDS_1844 hypothetical protein; PFAM: phosphoesterase DHHA1; SPTR: uncharacterized protein; PFAM: DHH family; DHHA1 domain; phosphoesterase dhha1 928203..929045 Calditerrivibrio nitroreducens DSM 19672 10008896 YP_004050956.1 CDS Calni_0882 NC_014758.1 929039 929629 D COGs: COG0218 GTPase; InterPro IPR019987: IPR005225: IPR002917; KEGG: ddf:DEFDS_1843 GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: Probable GTP-binding protein engB; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain; ribosome biogenesis GTP-binding protein ysxc 929039..929629 Calditerrivibrio nitroreducens DSM 19672 10008897 YP_004050957.1 CDS Calni_0883 NC_014758.1 929589 930155 D COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: ddf:DEFDS_1842 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; SPTR: Phospholipase D/transphosphatidylase; PFAM: Polyphosphate kinase; Phospholipase D Active site motif; phospholipase d/transphosphatidylase 929589..930155 Calditerrivibrio nitroreducens DSM 19672 10008898 YP_004050958.1 CDS Calni_0884 NC_014758.1 930226 931137 R COGs: COG0506 Proline dehydrogenase; InterPro IPR002872: IPR008219: IPR000215; KEGG: ddf:DEFDS_1068 proline dehydrogenase; PFAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; PFAM: Proline dehydrogenase; proline dehydrogenase complement(930226..931137) Calditerrivibrio nitroreducens DSM 19672 10008899 YP_004050959.1 CDS Calni_0885 NC_014758.1 931148 932788 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931: IPR015590: IPR016160; KEGG: ddf:DEFDS_1067 1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: 1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; delta-1-pyrroline-5-carboxylate dehydrogenase complement(931148..932788) Calditerrivibrio nitroreducens DSM 19672 10008900 YP_004050960.1 CDS Calni_0886 NC_014758.1 932950 934167 D COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: ddf:DEFDS_1287 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase; SPTR: Saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase; catalase 932950..934167 Calditerrivibrio nitroreducens DSM 19672 10008901 YP_004050961.1 CDS Calni_0887 NC_014758.1 934164 935348 D COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR005730: IPR000183; KEGG: dap:Dacet_2597 carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Carboxynorspermidine decarboxylase; TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase; carboxynorspermidine decarboxylase 934164..935348 Calditerrivibrio nitroreducens DSM 19672 10008902 YP_004050962.1 CDS Calni_0888 NC_014758.1 936029 936961 D KEGG: dap:Dacet_1115 hypothetical protein; SPTR: uncharacterized protein; PFAM: Nucleoside recognition; hypothetical protein 936029..936961 Calditerrivibrio nitroreducens DSM 19672 10008904 YP_004050963.1 CDS Calni_0889 NC_014758.1 937048 938349 D COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: ddf:DEFDS_0964 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: Phenylacetate-CoA ligase; PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase; phenylacetate-CoA ligase 937048..938349 Calditerrivibrio nitroreducens DSM 19672 10008905 YP_004050964.1 CDS Calni_0890 NC_014758.1 938362 938793 D COGs: COG4747 ACT domain-containing protein; InterPro IPR002912; KEGG: ddf:DEFDS_0963 hypothetical protein; PFAM: amino acid-binding ACT domain protein; SPTR: uncharacterized protein; PFAM: ACT domain; act domain-containing protein 938362..938793 Calditerrivibrio nitroreducens DSM 19672 10008906 YP_004050965.1 CDS Calni_0891 NC_014758.1 938803 939912 D COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828: IPR000709; KEGG: ddf:DEFDS_0962 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; PFAM: Receptor family ligand binding region; amino acid/amide ABC transporter substrate-binding protein, haat family 938803..939912 Calditerrivibrio nitroreducens DSM 19672 10008907 YP_004050966.1 CDS Calni_0892 NC_014758.1 939932 941059 D COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828: IPR000709; KEGG: ddf:DEFDS_0962 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; PFAM: Receptor family ligand binding region; amino acid/amide ABC transporter substrate-binding protein, haat family 939932..941059 Calditerrivibrio nitroreducens DSM 19672 10008908 YP_004050967.1 CDS Calni_0893 NC_014758.1 941059 941922 D COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: ddf:DEFDS_0961 branched-chain amino acid ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component; amino acid/amide ABC transporter membrane protein 1, haat family 941059..941922 Calditerrivibrio nitroreducens DSM 19672 10008909 YP_004050968.1 CDS Calni_0894 NC_014758.1 941919 942860 D COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dap:Dacet_1874 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component; amino acid/amide ABC transporter membrane protein 2, haat family 941919..942860 Calditerrivibrio nitroreducens DSM 19672 10008910 YP_004050969.1 CDS Calni_0895 NC_014758.1 942847 943596 D COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: dap:Dacet_1873 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid/amide ABC transporter ATP-binding protein 1, haat family 942847..943596 Calditerrivibrio nitroreducens DSM 19672 10008911 YP_004050970.1 CDS Calni_0896 NC_014758.1 943589 944311 D COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: dap:Dacet_1872 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; amino acid/amide ABC transporter ATP-binding protein 2, haat family 943589..944311 Calditerrivibrio nitroreducens DSM 19672 10008912 YP_004050971.1 CDS Calni_0897 NC_014758.1 944313 945614 D COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: ddf:DEFDS_0957 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: Phenylacetate-CoA ligase; PFAM: AMP-binding enzyme; phenylacetate-CoA ligase 944313..945614 Calditerrivibrio nitroreducens DSM 19672 10008913 YP_004050972.1 CDS Calni_0898 NC_014758.1 945607 946188 D COGs: COG1896 hydrolase of HD superfamily; InterPro IPR006675: IPR003607: IPR006674; KEGG: ddf:DEFDS_0956 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: uncharacterized protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 945607..946188 Calditerrivibrio nitroreducens DSM 19672 10008914 YP_004050973.1 CDS Calni_0899 NC_014758.1 946169 946684 D KEGG: ddf:DEFDS_1232 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 946169..946684 Calditerrivibrio nitroreducens DSM 19672 10008915 YP_004050974.1 CDS Calni_0900 NC_014758.1 946796 950353 D COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR011895: IPR002880: IPR019752: IPR019456: IPR 011766: IPR017900: IPR017896; KEGG: ddf:DEFDS_0568 pyruvate:ferredoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate ferredoxin/flavodoxin oxidoreductase 946796..950353 Calditerrivibrio nitroreducens DSM 19672 10008916 YP_004050975.1 CDS Calni_0901 NC_014758.1 950450 951718 R COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR004722: IPR006680: IPR002195; KEGG: ddf:DEFDS_0840 dihydroorotase; PFAM: amidohydrolase; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; dihydroorotase complement(950450..951718) Calditerrivibrio nitroreducens DSM 19672 10008917 YP_004050976.1 CDS Calni_0902 NC_014758.1 951720 952655 R COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR002082: IPR006132: IPR006131: IPR006130; KEGG: ddf:DEFDS_0841 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(951720..952655) Calditerrivibrio nitroreducens DSM 19672 10008918 YP_004050977.1 CDS Calni_0903 NC_014758.1 952657 953193 R COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: ddf:DEFDS_0842 bifunctional pyrimidine biosynthesis protein PyrR; PFAM: phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Bifunctional pyrimidine biosynthesis protein PyrR; PFAM: Phosphoribosyl transferase domain; uracil phosphoribosyltransferase complement(952657..953193) Calditerrivibrio nitroreducens DSM 19672 10008919 YP_004050978.1 CDS Calni_0904 NC_014758.1 953399 953785 D KEGG: ddf:DEFDS_1114 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 953399..953785 Calditerrivibrio nitroreducens DSM 19672 10008920 YP_004050979.1 CDS Calni_0905 NC_014758.1 953785 954234 D COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: ddf:DEFDS_1115 amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Amino-acid N-acetyltransferase; PFAM: acetyltransferase (GNAT) family; n-acetylglutamate synthase 953785..954234 Calditerrivibrio nitroreducens DSM 19672 10008921 YP_004050980.1 CDS Calni_0906 NC_014758.1 954242 955357 D COGs: COG1186 Protein chain release factor B; InterPro IPR004374: IPR020853: IPR005139: IPR000352; KEGG: ddf:DEFDS_1117 peptide chain release factor RF-2; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor 2; TIGRFAM: peptide chain release factor 2; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 954242..955357 Calditerrivibrio nitroreducens DSM 19672 10008922 YP_004050981.1 CDS Calni_0907 NC_014758.1 955354 956451 D COGs: COG0787 Alanine racemase; InterPro IPR000821: IPR001608: IPR011079: IPR020622; KEGG: ddf:DEFDS_1118 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase 955354..956451 Calditerrivibrio nitroreducens DSM 19672 10008923 YP_004050982.1 CDS Calni_0908 NC_014758.1 956444 957214 D COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: ddf:DEFDS_1119 ABC transporter permease; PFAM: protein of unknown function DUF140; SPTR: ABC transporter, permease; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 956444..957214 Calditerrivibrio nitroreducens DSM 19672 10008924 YP_004050983.1 CDS Calni_0909 NC_014758.1 957219 957977 D COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: ddf:DEFDS_1120 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter 957219..957977 Calditerrivibrio nitroreducens DSM 19672 10008925 YP_004050984.1 CDS Calni_0910 NC_014758.1 957986 959566 D COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: ddf:DEFDS_1121 ABC transporter substrate-binding protein; PFAM: Mammalian cell entry related domain protein; SPTR: ABC transporter, substrate-binding protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein; mammalian cell entry related domain-containing protein 957986..959566 Calditerrivibrio nitroreducens DSM 19672 10008926 YP_004050985.1 CDS Calni_0911 NC_014758.1 959570 960355 D COGs: COG2107 periplasmic solute-binding protein; KEGG: ddf:DEFDS_1123 hypothetical protein; SPTR: uncharacterized protein; PFAM: periplasminc binding protein (DUF178); hypothetical protein 959570..960355 Calditerrivibrio nitroreducens DSM 19672 10008927 YP_004050986.1 CDS Calni_0912 NC_014758.1 960410 960964 D KEGG: ddf:DEFDS_1124 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 960410..960964 Calditerrivibrio nitroreducens DSM 19672 10008928 YP_004050987.1 CDS Calni_0913 NC_014758.1 961274 962836 D InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_0353 hypothetical protein; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 961274..962836 Calditerrivibrio nitroreducens DSM 19672 10008929 YP_004050988.1 CDS Calni_0914 NC_014758.1 963109 963561 D COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: ddf:DEFDS_0971 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; peptidylprolyl isomerase fkbp-type 963109..963561 Calditerrivibrio nitroreducens DSM 19672 10008930 YP_004050989.1 CDS Calni_0915 NC_014758.1 963558 963995 D COGs: COG0756 dUTPase; InterPro IPR008181: IPR008180; KEGG: ddf:DEFDS_1519 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase; PRIAM: dUTP diphosphatase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase 963558..963995 Calditerrivibrio nitroreducens DSM 19672 10008931 YP_004050990.1 CDS Calni_0916 NC_014758.1 963961 964338 D COGs: COG2105 conserved hypothetical protein; InterPro IPR009288; KEGG: mja:MJ_1514 hypothetical protein; PFAM: AIG2 family protein; SPTR: AIG2 family protein; PFAM: AIG2-like family; aig2 family protein 963961..964338 Calditerrivibrio nitroreducens DSM 19672 10008932 YP_004050991.1 CDS Calni_0917 NC_014758.1 964443 965372 D COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817: IPR005302: IPR001453; KEGG: ddf:DEFDS_0070 hypothetical protein; PFAM: molybdopterin binding domain; MOSC domain containing protein; SPTR: uncharacterized protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MOSC domain; TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 964443..965372 Calditerrivibrio nitroreducens DSM 19672 10008933 YP_004050992.1 CDS Calni_0918 NC_014758.1 965382 966026 D COGs: COG0125 Thymidylate kinase; InterPro IPR018094: IPR000062: IPR018095; KEGG: ddf:DEFDS_0069 dTMP kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase 965382..966026 Calditerrivibrio nitroreducens DSM 19672 10008934 YP_004050993.1 CDS Calni_0919 NC_014758.1 966010 966933 D COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: ddf:DEFDS_0068 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: DNA polymerase III, delta' subunit; hypothetical protein 966010..966933 Calditerrivibrio nitroreducens DSM 19672 10008935 YP_004050994.1 CDS Calni_0920 NC_014758.1 966920 967636 D COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: dap:Dacet_2364 PSP1 domain protein; PFAM: PSP1 domain protein; SPTR: PSP1 domain protein; PFAM: PSP1 C-terminal conserved region; psp1 domain-containing protein 966920..967636 Calditerrivibrio nitroreducens DSM 19672 10008936 YP_004050995.1 CDS Calni_0921 NC_014758.1 967633 969543 D COGs: COG0143 Methionyl-tRNA synthetase; InterPro IPR002304: IPR004495: IPR002547: IPR014758: IPR 015413; KEGG: ddf:DEFDS_0066 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein; SPTR: Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: Anticodon-binding domain; tRNA synthetases class I (M); tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase 967633..969543 Calditerrivibrio nitroreducens DSM 19672 10008937 YP_004050996.1 CDS Calni_0922 NC_014758.1 969540 970391 D COGs: COG0084 Mg-dependent DNase; InterPro IPR015991: IPR012278: IPR001130: IPR018228; KEGG: dap:Dacet_2362 hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; SPTR: Hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; hydrolase, tatd family 969540..970391 Calditerrivibrio nitroreducens DSM 19672 10008938 YP_004050997.1 CDS Calni_0923 NC_014758.1 970384 970746 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: dap:Dacet_2361 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein 970384..970746 Calditerrivibrio nitroreducens DSM 19672 10008939 YP_004050998.1 CDS Calni_0924 NC_014758.1 970888 971355 D COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006015: IPR006016; KEGG: ddf:DEFDS_1788 universal stress protein; PFAM: UspA domain-containing protein; SPTR: Universal stress protein; PFAM: Universal stress protein family; uspa domain-containing protein 970888..971355 Calditerrivibrio nitroreducens DSM 19672 10008940 YP_004050999.1 CDS Calni_0925 NC_014758.1 971365 971565 D COGs: COG1942 Uncharacterized protein 4-oxalocrotonate tautomerase homolog; InterPro IPR004370; KEGG: mpd:MCP_1128 4-oxalocrotonate tautomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: 4-oxalocrotonate tautomerase; PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase 971365..971565 Calditerrivibrio nitroreducens DSM 19672 10008941 YP_004051000.1 CDS Calni_0926 NC_014758.1 971692 973773 D COGs: COG1298 Flagellar biosynthesis pathway component FlhA; InterPro IPR006301: IPR001712; KEGG: ddf:DEFDS_0414 flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; SPTR: Flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein flha 971692..973773 Calditerrivibrio nitroreducens DSM 19672 10008942 YP_004051001.1 CDS Calni_0927 NC_014758.1 973770 974942 D COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR020006: IPR003593: IPR000897; KEGG: dap:Dacet_2845 flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; SPTR: Flagellar biosynthetic protein FlhF; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; flagellar biosynthetic protein flhf 973770..974942 Calditerrivibrio nitroreducens DSM 19672 10008943 YP_004051002.1 CDS Calni_0928 NC_014758.1 974946 975785 D COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: dap:Dacet_2846 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; cobyrinic acid ac-diamide synthase 974946..975785 Calditerrivibrio nitroreducens DSM 19672 10008944 YP_004051003.1 CDS Calni_0929 NC_014758.1 975782 975991 D KEGG: ddf:DEFDS_0417 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 975782..975991 Calditerrivibrio nitroreducens DSM 19672 10008945 YP_004051004.1 CDS Calni_0930 NC_014758.1 975988 976716 D COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterPro IPR014284: IPR012845: IPR000943: IPR007627: IPR 007630; KEGG: dap:Dacet_2848 RNA polymerase, sigma 28 subunit, FliA/WhiG; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-28 subunit sigd/flia/whig 975988..976716 Calditerrivibrio nitroreducens DSM 19672 10008946 YP_004051005.1 CDS Calni_0931 NC_014758.1 976713 977777 D COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR001789: IPR000673: IPR008248; KEGG: ddf:DEFDS_0419 chemotaxis-specific methylesterase CheB; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; SPTR: Chemotaxis-specific methylesterase CheB; PFAM: CheB methylesterase; Response regulator receiver domain; response regulator receiver modulated cheb methylesterase 976713..977777 Calditerrivibrio nitroreducens DSM 19672 10008947 YP_004051006.1 CDS Calni_0932 NC_014758.1 977798 978826 D COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: ddf:DEFDS_0420 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; flagellar motor switch protein flim 977798..978826 Calditerrivibrio nitroreducens DSM 19672 10008948 YP_004051007.1 CDS Calni_0933 NC_014758.1 978807 979676 D COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR012826: IPR001172: IPR001543: IPR018130; KEGG: dap:Dacet_2851 flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; SPTR: Flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; manually curated; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; flagellar motor switch protein flin 978807..979676 Calditerrivibrio nitroreducens DSM 19672 10008949 YP_004051008.1 CDS Calni_0934 NC_014758.1 979747 980124 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789; KEGG: dap:Dacet_2852 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein 979747..980124 Calditerrivibrio nitroreducens DSM 19672 10008950 YP_004051009.1 CDS Calni_0935 NC_014758.1 980126 980758 D KEGG: ddf:DEFDS_0423 hypothetical protein; SPTR: uncharacterized protein; PFAM: Chemotaxis phosphatase, CheZ; hypothetical protein 980126..980758 Calditerrivibrio nitroreducens DSM 19672 10008951 YP_004051010.1 CDS Calni_0936 NC_014758.1 980768 982867 D COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207: IPR003594: IPR002545: IPR001789: IPR 005467: IPR004358: IPR004105; KEGG: ddf:DEFDS_0424 two-component system, chemotaxis family, sensor kinase CheA; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; response regulator receiver; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; response regulator receiver; SPTR: Two-component system, chemotaxis family, sensor kinase CheA; PFAM: CheW-like domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; chea signal transduction histidine kinase 980768..982867 Calditerrivibrio nitroreducens DSM 19672 10008952 YP_004051011.1 CDS Calni_0937 NC_014758.1 982854 983177 D KEGG: ddf:DEFDS_0425 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 982854..983177 Calditerrivibrio nitroreducens DSM 19672 10008953 YP_004051012.1 CDS Calni_0938 NC_014758.1 983140 983688 D KEGG: dap:Dacet_2855 OmpA/MotB domain protein; SPTR: OmpA/MotB domain protein; hypothetical protein 983140..983688 Calditerrivibrio nitroreducens DSM 19672 10008954 YP_004051013.1 CDS Calni_0939 NC_014758.1 983685 984680 D KEGG: ddf:DEFDS_0427 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 983685..984680 Calditerrivibrio nitroreducens DSM 19672 10008955 YP_004051014.1 CDS Calni_0940 NC_014758.1 984751 986328 D COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR000014: IPR001932: IPR010822; KEGG: ddf:DEFDS_0428 hypothetical protein; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; PAS domain containing protein; SPTR: uncharacterized protein; PFAM: Stage II sporulation protein E (SpoIIE); pas/pac sensor protein 984751..986328 Calditerrivibrio nitroreducens DSM 19672 10008956 YP_004051015.1 CDS Calni_0941 NC_014758.1 986329 986652 D COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR003658: IPR002645; KEGG: ddf:DEFDS_0429 anti-sigma factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma-factor antagonist 986329..986652 Calditerrivibrio nitroreducens DSM 19672 10008957 YP_004051016.1 CDS Calni_0942 NC_014758.1 986657 988075 D COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155: IPR021133: IPR002645; KEGG: ddf:DEFDS_0430 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: uncharacterized protein; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; pbs lyase heat domain-containing protein repeat-containing protein 986657..988075 Calditerrivibrio nitroreducens DSM 19672 10008958 YP_004051017.1 CDS Calni_0943 NC_014758.1 988072 988902 D COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780; KEGG: dap:Dacet_2860 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: MCP methyltransferase, CheR-type; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; mcp methyltransferase, cher-type 988072..988902 Calditerrivibrio nitroreducens DSM 19672 10008959 YP_004051018.1 CDS Calni_0944 NC_014758.1 988936 989226 D KEGG: ddf:DEFDS_0432 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 988936..989226 Calditerrivibrio nitroreducens DSM 19672 10008960 YP_004051019.1 CDS Calni_0945 NC_014758.1 989229 990017 D KEGG: ddf:DEFDS_0433 hypothetical protein; SPTR: uncharacterized protein; PFAM: PilZ domain; hypothetical protein 989229..990017 Calditerrivibrio nitroreducens DSM 19672 10008961 YP_004051020.1 CDS Calni_0946 NC_014758.1 990014 990523 D KEGG: ddf:DEFDS_0434 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 990014..990523 Calditerrivibrio nitroreducens DSM 19672 10008962 YP_004051021.1 CDS Calni_0947 NC_014758.1 990520 991374 D KEGG: dap:Dacet_2864 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 990520..991374 Calditerrivibrio nitroreducens DSM 19672 10008963 YP_004051022.1 CDS Calni_0948 NC_014758.1 991398 992564 D COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR002792: IPR010280; KEGG: ddf:DEFDS_0222 tRNA (uracil-5-)-methyltransferase; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; SPTR: tRNA (Uracil-5-)-methyltransferase; PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; Ribosomal RNA adenine dimethylase; methyltransferase 991398..992564 Calditerrivibrio nitroreducens DSM 19672 10008964 YP_004051023.1 CDS Calni_0949 NC_014758.1 992574 994070 D COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: dba:Dbac_1067 protein of unknown function DUF195; PFAM: protein of unknown function DUF195; SPTR: uncharacterized protein; PFAM: RmuC family; hypothetical protein 992574..994070 Calditerrivibrio nitroreducens DSM 19672 10008965 YP_004051024.1 CDS Calni_0950 NC_014758.1 994159 994572 D COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310: IPR019808; KEGG: ddf:DEFDS_1906 histidine triad family protein; PFAM: histidine triad (HIT) protein; SPTR: Histidine triad family protein; PFAM: HIT domain; histidine triad (hit) protein 994159..994572 Calditerrivibrio nitroreducens DSM 19672 10008966 YP_004051025.1 CDS Calni_0951 NC_014758.1 994581 996065 D COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR011782: IPR001478: IPR001940: IPR001254; KEGG: gsu:GSU0080 protease DegQ; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: Protease Do; TIGRFAM: protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; protease do 994581..996065 Calditerrivibrio nitroreducens DSM 19672 10008967 YP_004051026.1 CDS Calni_0952 NC_014758.1 996106 997011 R InterPro IPR007404; KEGG: ddf:DEFDS_1879 hypothetical protein; PFAM: membrane-bound metal-dependent hydrolase; SPTR: uncharacterized protein; PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457); membrane-bound metal-dependent hydrolase complement(996106..997011) Calditerrivibrio nitroreducens DSM 19672 10008968 YP_004051027.1 CDS Calni_0953 NC_014758.1 997050 998426 R COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR011782: IPR001478: IPR001940: IPR001254; KEGG: ddf:DEFDS_1060 peptidase S1C, Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase S1C, Do; TIGRFAM: protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; protease do complement(997050..998426) Calditerrivibrio nitroreducens DSM 19672 10008969 YP_004051028.1 CDS Calni_0954 NC_014758.1 998440 999162 R KEGG: dap:Dacet_1971 sigma E regulatory protein, MucB/RseB; SPTR: sigma E regulatory protein, MucB/RseB; sigma e regulatory protein, mucb/rseb complement(998440..999162) Calditerrivibrio nitroreducens DSM 19672 10008970 YP_004051029.1 CDS Calni_0955 NC_014758.1 999171 999608 R KEGG: ddf:DEFDS_1058 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(999171..999608) Calditerrivibrio nitroreducens DSM 19672 10008971 YP_004051030.1 CDS Calni_0956 NC_014758.1 999586 1000167 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: ddf:DEFDS_1057 DNA-directed RNA polymerase sigma 70 factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-24 subunit rpoe complement(999586..1000167) Calditerrivibrio nitroreducens DSM 19672 10008972 YP_004051031.1 CDS Calni_0957 NC_014758.1 1000314 1001942 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR012827: IPR004089: IPR012312: IPR016131; KEGG: ddf:DEFDS_1545 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; SMART: chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: hemerythrin-like metal-binding domain; methyl-accepting chemotaxis sensory transducer 1000314..1001942 Calditerrivibrio nitroreducens DSM 19672 10008973 YP_004051032.1 CDS Calni_0958 NC_014758.1 1001965 1002246 R InterPro IPR019657; KEGG: ddf:DEFDS_1970 hypothetical protein; PFAM: Late competence development protein ComFB; SPTR: uncharacterized protein; PFAM: Late competence development protein ComFB; late competence development protein comfb complement(1001965..1002246) Calditerrivibrio nitroreducens DSM 19672 10008974 YP_004051033.1 CDS Calni_0959 NC_014758.1 1002297 1003292 D COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR006168: IPR011128: IPR006109; KEGG: ddf:DEFDS_1969 glycerol-3-phosphate dehydrogenase (NAD(P)+); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol 3-phosphate dehydrogenase (nad(p)+) 1002297..1003292 Calditerrivibrio nitroreducens DSM 19672 10008975 YP_004051034.1 CDS Calni_0960 NC_014758.1 1003316 1003567 R InterPro IPR013429; KEGG: ddf:DEFDS_1611 hypothetical protein; PFAM: regulatory protein FmdB; SPTR: uncharacterized protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: regulatory protein, FmdB family; regulatory protein, fmdb family complement(1003316..1003567) Calditerrivibrio nitroreducens DSM 19672 10008976 YP_004051035.1 CDS Calni_0961 NC_014758.1 1003706 1004800 D COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786: IPR001544; KEGG: shn:Shewana3_3830 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; branched chain amino acid aminotransferase 1003706..1004800 Calditerrivibrio nitroreducens DSM 19672 10008977 YP_004051036.1 CDS Calni_0962 NC_014758.1 1004842 1005726 R COGs: COG1159 GTPase; InterPro IPR005225: IPR005662: IPR003593: IPR004044: IPR 002917; KEGG: ddf:DEFDS_1082 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; SMART: AAA ATPase; SPTR: GTP-binding protein era homolog; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein era complement(1004842..1005726) Calditerrivibrio nitroreducens DSM 19672 10008978 YP_004051037.1 CDS Calni_0963 NC_014758.1 1005723 1006991 R COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170: IPR018253; KEGG: ddf:DEFDS_1081 magnesium/cobalt efflux protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; SPTR: Magnesium/cobalt efflux protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein complement(1005723..1006991) Calditerrivibrio nitroreducens DSM 19672 10008979 YP_004051038.1 CDS Calni_0964 NC_014758.1 1007002 1007700 R COGs: COG0818 Diacylglycerol kinase; InterPro IPR000326: IPR000829; KEGG: ddf:DEFDS_1080 diacylglycerol kinase; PFAM: diacylglycerol kinase; phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Diacylglycerol kinase; PFAM: Prokaryotic diacylglycerol kinase; PAP2 superfamily; diacylglycerol kinase complement(1007002..1007700) Calditerrivibrio nitroreducens DSM 19672 10008980 YP_004051039.1 CDS Calni_0965 NC_014758.1 1007762 1008211 R COGs: COG0319 metal-dependent hydrolase; InterPro IPR002036: IPR020549; KEGG: ddf:DEFDS_1079 hypothetical protein; PFAM: protein of unknown function UPF0054; SPTR: metalloprotease DEFDS_1079; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; hypothetical protein complement(1007762..1008211) Calditerrivibrio nitroreducens DSM 19672 10008981 YP_004051040.1 CDS Calni_0966 NC_014758.1 1008223 1009170 R COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR018111: IPR003714; KEGG: ddf:DEFDS_1078 phosphate starvation-induced protein PhoH; PFAM: PhoH family protein; K Homology, type 1, subgroup; SPTR: Phosphate starvation-induced protein PhoH; PFAM: KH domain; PhoH-like protein; phoh family protein complement(1008223..1009170) Calditerrivibrio nitroreducens DSM 19672 10008982 YP_004051041.1 CDS Calni_0967 NC_014758.1 1009145 1011802 R COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR000644: IPR001667: IPR003156: IPR002646; KEGG: ddf:DEFDS_1077 polyA polymerase family protein; PFAM: Polynucleotide adenylyltransferase region; CBS domain containing protein; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: CBS domain containing protein; SPTR: PolyA polymerase family protein; PFAM: DHH family; CBS domain; Poly A polymerase head domain; polynucleotide adenylyltransferase complement(1009145..1011802) Calditerrivibrio nitroreducens DSM 19672 10008983 YP_004051042.1 CDS Calni_0968 NC_014758.1 1011799 1012692 R COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: dap:Dacet_1530 integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; integrase family protein complement(1011799..1012692) Calditerrivibrio nitroreducens DSM 19672 10008984 YP_004051043.1 CDS Calni_0969 NC_014758.1 1012818 1013036 D KEGG: mxa:MXAN_5749 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1012818..1013036 Calditerrivibrio nitroreducens DSM 19672 10008985 YP_004051044.1 CDS Calni_0970 NC_014758.1 1013029 1013724 D COGs: COG2884 ATPase involved in cell division; InterPro IPR003593: IPR003439: IPR017871: IPR002078; KEGG: ddf:DEFDS_1362 cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Cell division ATP-binding protein FtsE; PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; sigma 54 interacting domain-containing protein 1013029..1013724 Calditerrivibrio nitroreducens DSM 19672 10008986 YP_004051045.1 CDS Calni_0971 NC_014758.1 1013678 1014598 D COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: ddf:DEFDS_1363 cell division transport system permease protein; PFAM: protein of unknown function DUF214; SPTR: Cell division transport system permease protein; PFAM: Predicted permease; hypothetical protein 1013678..1014598 Calditerrivibrio nitroreducens DSM 19672 10008987 YP_004051046.1 CDS Calni_0972 NC_014758.1 1014591 1015751 D COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: ddf:DEFDS_1364 hypothetical protein; PFAM: Peptidase M23; SPTR: uncharacterized protein; PFAM: Peptidase family M23; peptidase m23 1014591..1015751 Calditerrivibrio nitroreducens DSM 19672 10008988 YP_004051047.1 CDS Calni_0973 NC_014758.1 1015748 1017085 D COGs: COG0793 Periplasmic protease; InterPro IPR004447: IPR001478: IPR005151; KEGG: ddf:DEFDS_1365 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); carboxyl-terminal protease 1015748..1017085 Calditerrivibrio nitroreducens DSM 19672 10008989 YP_004051048.1 CDS Calni_0974 NC_014758.1 1017066 1018292 D COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: ddf:DEFDS_1366 hypothetical protein; PFAM: protein of unknown function DUF610 YibQ; SPTR: uncharacterized protein; PFAM: Divergent polysaccharide deacetylase; hypothetical protein 1017066..1018292 Calditerrivibrio nitroreducens DSM 19672 10008990 YP_004051049.1 CDS Calni_0975 NC_014758.1 1018292 1019266 D COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR017861: IPR000905: IPR017860; KEGG: ddf:DEFDS_1367 O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; o-sialoglycoprotein endopeptidase 1018292..1019266 Calditerrivibrio nitroreducens DSM 19672 10008991 YP_004051050.1 CDS Calni_0976 NC_014758.1 1019263 1020210 D COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269; KEGG: ddf:DEFDS_1368 tRNA-dihydrouridine synthase; PFAM: dihydrouridine synthase DuS; SPTR: tRNA-dihydrouridine synthase; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family; dihydrouridine synthase dus 1019263..1020210 Calditerrivibrio nitroreducens DSM 19672 10008992 YP_004051051.1 CDS Calni_0977 NC_014758.1 1020565 1022028 D COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999: IPR006805: IPR015890; KEGG: dap:Dacet_1172 anthranilate synthase; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; anthranilate synthase, component i 1020565..1022028 Calditerrivibrio nitroreducens DSM 19672 10008993 YP_004051052.1 CDS Calni_0978 NC_014758.1 1022012 1022602 D COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR006221: IPR017926: IPR006220: IPR011702: IPR 001317: IPR000991; KEGG: ddf:DEFDS_0439 anthranilate synthase component II; PFAM: glutamine amidotransferase class-I; SPTR: Anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; glutamine amidotransferase of anthranilate synthase 1022012..1022602 Calditerrivibrio nitroreducens DSM 19672 10008994 YP_004051053.1 CDS Calni_0979 NC_014758.1 1022577 1023566 D COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR005940: IPR017459: IPR000312; KEGG: ddf:DEFDS_0440 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 1022577..1023566 Calditerrivibrio nitroreducens DSM 19672 10008995 YP_004051054.1 CDS Calni_0980 NC_014758.1 1023559 1024320 D COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798: IPR001468; KEGG: dap:Dacet_1175 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 1023559..1024320 Calditerrivibrio nitroreducens DSM 19672 10008996 YP_004051055.1 CDS Calni_0981 NC_014758.1 1024310 1024837 D COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: ddf:DEFDS_0442 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; n-(5'phosphoribosyl)anthranilate isomerase (prai) 1024310..1024837 Calditerrivibrio nitroreducens DSM 19672 10008997 YP_004051056.1 CDS Calni_0982 NC_014758.1 1024849 1026021 D COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR006654: IPR001926: IPR006653; KEGG: ddf:DEFDS_0443 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Tryptophan synthase, beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 1024849..1026021 Calditerrivibrio nitroreducens DSM 19672 10008998 YP_004051057.1 CDS Calni_0983 NC_014758.1 1026021 1026719 D COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR002028; KEGG: ddf:DEFDS_0444 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain; SPTR: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 1026021..1026719 Calditerrivibrio nitroreducens DSM 19672 10008999 YP_004051058.1 CDS Calni_0984 NC_014758.1 1026842 1028560 D COGs: COG0442 Prolyl-tRNA synthetase; InterPro IPR004500: IPR006195: IPR002316: IPR002314: IPR 007214: IPR004154; KEGG: ddf:DEFDS_2069 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; SPTR: Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase 1026842..1028560 Calditerrivibrio nitroreducens DSM 19672 10009000 YP_004051059.1 CDS Calni_0985 NC_014758.1 1028622 1029476 R COGs: COG1092 SAM-dependent methyltransferase; KEGG: dap:Dacet_0735 hypothetical protein; SPTR: uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase; hypothetical protein complement(1028622..1029476) Calditerrivibrio nitroreducens DSM 19672 10009001 YP_004051060.1 CDS Calni_0986 NC_014758.1 1029466 1032018 R COGs: COG1049 Aconitase B; InterPro IPR004406: IPR015929: IPR001030: IPR018136; KEGG: ddf:DEFDS_0917 aconitate hydratase; PFAM: Aconitase B; aconitate hydratase domain-containing protein; SPTR: Aconitate hydratase 2; TIGRFAM: aconitate hydratase 2; PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; aconitase complement(1029466..1032018) Calditerrivibrio nitroreducens DSM 19672 10009002 YP_004051061.1 CDS Calni_0987 NC_014758.1 1032292 1033911 D COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646: IPR004647: IPR011167; KEGG: gbm:Gbem_0889 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; fumarase 1032292..1033911 Calditerrivibrio nitroreducens DSM 19672 10009003 YP_004051062.1 CDS Calni_0988 NC_014758.1 1033951 1034658 D COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR014732: IPR001754: IPR018089; KEGG: dap:Dacet_1908 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; orotidine 5'-phosphate decarboxylase 1033951..1034658 Calditerrivibrio nitroreducens DSM 19672 10009004 YP_004051063.1 CDS Calni_0989 NC_014758.1 1034651 1035226 D COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR006273: IPR000836; KEGG: ddf:DEFDS_0566 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; orotate phosphoribosyltransferase 1034651..1035226 Calditerrivibrio nitroreducens DSM 19672 10009005 YP_004051064.1 CDS Calni_0990 NC_014758.1 1035241 1037337 R COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: dap:Dacet_0437 glycoside hydrolase family 57; PFAM: glycoside hydrolase family 57; SPTR: Glycoside hydrolase family 57; PFAM: Glycosyl hydrolase family 57; glycoside hydrolase complement(1035241..1037337) Calditerrivibrio nitroreducens DSM 19672 10009006 YP_004051065.1 CDS Calni_0991 NC_014758.1 1037338 1039818 R COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835: IPR001451: IPR005844: IPR005845; KEGG: dap:Dacet_0438 nucleotidyl transferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: Nucleotidyl transferase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Nucleotidyl transferase; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; nucleotidyltransferase complement(1037338..1039818) Calditerrivibrio nitroreducens DSM 19672 10009007 YP_004051066.1 CDS Calni_0992 NC_014758.1 1039838 1042390 R COGs: COG0058 Glucan phosphorylase; InterPro IPR011834: IPR000811; KEGG: dap:Dacet_1353 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: Alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; alpha-glucan phosphorylase complement(1039838..1042390) Calditerrivibrio nitroreducens DSM 19672 10009008 YP_004051067.1 CDS Calni_0993 NC_014758.1 1042551 1043000 D COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: ddf:DEFDS_1214 purine-binding chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: Purine-binding chemotaxis protein CheW; PFAM: CheW-like domain; chew protein 1042551..1043000 Calditerrivibrio nitroreducens DSM 19672 10009009 YP_004051068.1 CDS Calni_0994 NC_014758.1 1043000 1045270 D COGs: COG1200 RecG-like helicase; InterPro IPR004609: IPR014001: IPR001650: IPR014021: IPR 011545; KEGG: ddf:DEFDS_1215 ATP-dependent DNA recombinase RecG; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent DNA recombinase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase recg 1043000..1045270 Calditerrivibrio nitroreducens DSM 19672 10009010 YP_004051069.1 CDS Calni_0995 NC_014758.1 1045297 1045968 R KEGG: pmx:PERMA_1964 lipoprotein; SPTR: lipoprotein; lipoprotein complement(1045297..1045968) Calditerrivibrio nitroreducens DSM 19672 10009011 YP_004051070.1 CDS Calni_0996 NC_014758.1 1046148 1047173 D COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR005986: IPR012080: IPR000534: IPR012280; KEGG: ddf:DEFDS_1418 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase, gamma-proteobacterial; aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); aspartate semialdehyde dehydrogenase 1046148..1047173 Calditerrivibrio nitroreducens DSM 19672 10009012 YP_004051071.1 CDS Calni_0997 NC_014758.1 1047199 1047966 R COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002347; KEGG: ddf:DEFDS_1807 enoyl-[acyl-carrier protein] reductase (NADH); SPTR: Enoyl-[acyl-carrier protein] reductase (NADH); PFAM: short chain dehydrogenase; enoyl-ACP reductase complement(1047199..1047966) Calditerrivibrio nitroreducens DSM 19672 10009013 YP_004051072.1 CDS Calni_0998 NC_014758.1 1047975 1049303 R COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504: IPR003593: IPR007694; KEGG: ddf:DEFDS_1808 DNA repair protein RadA; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA replication and repair protein rada complement(1047975..1049303) Calditerrivibrio nitroreducens DSM 19672 10009014 YP_004051073.1 CDS Calni_0999 NC_014758.1 1049290 1050333 R COGs: COG2255 Holliday junction resolvasome helicase subunit; InterPro IPR004605: IPR008823: IPR003593: IPR008824: IPR 003959; KEGG: ddf:DEFDS_1809 Holliday junction DNA helicase RuvB; PFAM: ATPase AAA; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; holliday junction DNA helicase ruvb complement(1049290..1050333) Calditerrivibrio nitroreducens DSM 19672 10009015 YP_004051074.1 CDS Calni_1000 NC_014758.1 1050434 1051729 D InterPro IPR017896: IPR017900; KEGG: ddf:DEFDS_0692 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1050434..1051729 Calditerrivibrio nitroreducens DSM 19672 10009016 YP_004051075.1 CDS Calni_1001 NC_014758.1 1051726 1052127 D KEGG: ddf:DEFDS_0691 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1051726..1052127 Calditerrivibrio nitroreducens DSM 19672 10009017 YP_004051076.1 CDS Calni_1002 NC_014758.1 1052124 1052708 R COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: ddf:DEFDS_0690 hypothetical protein; PFAM: AMMECR1 domain protein; SPTR: uncharacterized protein; PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family; ammecr1 domain-containing protein complement(1052124..1052708) Calditerrivibrio nitroreducens DSM 19672 10009018 YP_004051077.1 CDS Calni_1003 NC_014758.1 1052907 1054493 D COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001: IPR001650: IPR014021: IPR014014: IPR 011545: IPR005580: IPR000629; KEGG: ddf:DEFDS_1798 ATP-dependent RNA helicase DEAD/DEAH box family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent RNA helicase, DEAD/DEAH box family; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; dead/deah box helicase domain-containing protein 1052907..1054493 Calditerrivibrio nitroreducens DSM 19672 10009019 YP_004051078.1 CDS Calni_1004 NC_014758.1 1054515 1055195 D COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: sul:SYO3AOP1_1247 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; polysaccharide deacetylase 1054515..1055195 Calditerrivibrio nitroreducens DSM 19672 10009020 YP_004051079.1 CDS Calni_1005 NC_014758.1 1055255 1055800 D InterPro IPR007527; KEGG: ddf:DEFDS_1216 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1055255..1055800 Calditerrivibrio nitroreducens DSM 19672 10009021 YP_004051080.1 CDS Calni_1006 NC_014758.1 1055878 1059111 D COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR006275: IPR011761: IPR005483: IPR005481: IPR 005479: IPR005480: IPR011607; KEGG: ddf:DEFDS_1217 carbamoylphosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: Carbamoylphosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 1055878..1059111 Calditerrivibrio nitroreducens DSM 19672 10009022 YP_004051081.1 CDS Calni_1007 NC_014758.1 1059115 1059909 D COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR017927: IPR012165: IPR001433: IPR019480; KEGG: dap:Dacet_1422 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; dihydroorotate oxidase b, electron transfer subunit 1059115..1059909 Calditerrivibrio nitroreducens DSM 19672 10009023 YP_004051082.1 CDS Calni_1008 NC_014758.1 1059911 1060825 D COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR005720: IPR012135: IPR001295; KEGG: dap:Dacet_1421 dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein; dihydroorotate oxidase b, catalytic subunit 1059911..1060825 Calditerrivibrio nitroreducens DSM 19672 10009024 YP_004051083.1 CDS Calni_1009 NC_014758.1 1061171 1061776 R COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR006664; KEGG: dba:Dbac_0633 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB domain protein; PFAM: OmpA family; ompa/motb domain-containing protein complement(1061171..1061776) Calditerrivibrio nitroreducens DSM 19672 10009025 YP_004051084.1 CDS Calni_1010 NC_014758.1 1061773 1062210 R KEGG: dat:HRM2_46490 hypothetical protein; SPTR: uncharacterized protein; PFAM: FecR protein; hypothetical protein complement(1061773..1062210) Calditerrivibrio nitroreducens DSM 19672 10009026 YP_004051085.1 CDS Calni_1011 NC_014758.1 1062427 1063533 R KEGG: ddf:DEFDS_1410 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF400; hypothetical protein complement(1062427..1063533) Calditerrivibrio nitroreducens DSM 19672 10009028 YP_004051086.1 CDS Calni_1012 NC_014758.1 1063587 1064789 R KEGG: ddf:DEFDS_1413 hypothetical protein; SPTR: uncharacterized protein; PFAM: Curli production assembly/transport component CsgG; hypothetical protein complement(1063587..1064789) Calditerrivibrio nitroreducens DSM 19672 10009029 YP_004051087.1 CDS Calni_1013 NC_014758.1 1064894 1065574 R COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273: IPR005122; KEGG: ddf:DEFDS_1425 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; phage spo1 DNA polymerase-like protein complement(1064894..1065574) Calditerrivibrio nitroreducens DSM 19672 10009030 YP_004051088.1 CDS Calni_1014 NC_014758.1 1065571 1066761 R COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR005252: IPR003382: IPR007085; KEGG: ddf:DEFDS_1426 P-pantothenate cysteine ligase / P-pantothenoylcysteine decarboxylase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: P-pantothenate cysteine ligase / P-pantothenoylcysteine decarboxylase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase complement(1065571..1066761) Calditerrivibrio nitroreducens DSM 19672 10009031 YP_004051089.1 CDS Calni_1015 NC_014758.1 1066754 1066966 R InterPro IPR003716: IPR006110; KEGG: ddf:DEFDS_1427 DNA-directed RNA polymerase omega subunit; PFAM: RNA polymerase Rpb6; SPTR: DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega complement(1066754..1066966) Calditerrivibrio nitroreducens DSM 19672 10009032 YP_004051090.1 CDS Calni_1016 NC_014758.1 1066967 1067578 R COGs: COG0194 Guanylate kinase; InterPro IPR017665: IPR008145: IPR008144: IPR020590; KEGG: dap:Dacet_1560 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase complement(1066967..1067578) Calditerrivibrio nitroreducens DSM 19672 10009033 YP_004051091.1 CDS Calni_1017 NC_014758.1 1067596 1068468 R COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR005229: IPR013527: IPR013551; KEGG: dap:Dacet_1561 hypothetical protein; PFAM: domain of unknown function DUF1732; YicC-like domain-containing protein; SPTR: uncharacterized protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255; hypothetical protein complement(1067596..1068468) Calditerrivibrio nitroreducens DSM 19672 10009034 YP_004051092.1 CDS Calni_1018 NC_014758.1 1068545 1069300 D COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107: IPR001972; KEGG: ddf:DEFDS_1430 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: uncharacterized protein; PFAM: SPFH domain / Band 7 family; spfh domain, band 7 family protein 1068545..1069300 Calditerrivibrio nitroreducens DSM 19672 10009035 YP_004051093.1 CDS Calni_1019 NC_014758.1 1069343 1069750 R COGs: COG3086 Positive regulator of sigma E activity; InterPro IPR007359; KEGG: ddf:DEFDS_0306 hypothetical protein; PFAM: Positive regulator of sigma(E) RseC/MucC; SPTR: uncharacterized protein; PFAM: Positive regulator of sigma(E), RseC/MucC; positive regulator of sigma e, rsec/mucc complement(1069343..1069750) Calditerrivibrio nitroreducens DSM 19672 10009036 YP_004051094.1 CDS Calni_1020 NC_014758.1 1069734 1069952 R InterPro IPR007167; KEGG: ddf:DEFDS_0436 ferrous iron transport protein A; PFAM: FeoA family protein; SPTR: Ferrous iron transport protein A; PFAM: FeoA domain; feoa family protein complement(1069734..1069952) Calditerrivibrio nitroreducens DSM 19672 10009037 YP_004051095.1 CDS Calni_1021 NC_014758.1 1069952 1071892 R COGs: COG0370 Fe2+ transport system protein B; InterPro IPR005225: IPR003373: IPR006073: IPR002917: IPR 011619: IPR011642: IPR011640; KEGG: ddf:DEFDS_0437 ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; SPTR: Ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transport protein b complement(1069952..1071892) Calditerrivibrio nitroreducens DSM 19672 10009038 YP_004051096.1 CDS Calni_1022 NC_014758.1 1072014 1074290 R COGs: COG0281 Malic enzyme; InterPro IPR012188: IPR012301: IPR012302: IPR002505: IPR 001969: IPR015884; KEGG: ddf:DEFDS_1074 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+); PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP+); PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; allosteric nADP-dependent malic enzyme complement(1072014..1074290) Calditerrivibrio nitroreducens DSM 19672 10009039 YP_004051097.1 CDS Calni_1023 NC_014758.1 1074823 1078110 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR001610: IPR003661: IPR003594: IPR 001789: IPR005467: IPR000700: IPR008207: IPR004358: IPR013655; KEGG: sbl:Sbal_3505 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 1074823..1078110 Calditerrivibrio nitroreducens DSM 19672 10009040 YP_004051098.1 CDS Calni_1024 NC_014758.1 1078107 1079021 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160: IPR001789; KEGG: azl:AZL_024270 two-component response regulator, modulated diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; SMART: GGDEF domain containing protein; response regulator receiver; SPTR: GGDEF:Response regulator receiver; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase 1078107..1079021 Calditerrivibrio nitroreducens DSM 19672 10009041 YP_004051099.1 CDS Calni_1025 NC_014758.1 1079051 1080010 D COGs: COG2951 Membrane-bound lytic murein transglycosylase B; KEGG: ddf:DEFDS_0819 membrane-bound lytic murein transglycosylase B; SPTR: Membrane-bound lytic murein transglycosylase B; membrane-bound lytic murein transglycosylase b 1079051..1080010 Calditerrivibrio nitroreducens DSM 19672 10009042 YP_004051100.1 CDS Calni_1026 NC_014758.1 1080097 1080240 D InterPro IPR000271; KEGG: ddf:DEFDS_0346 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 1080097..1080240 Calditerrivibrio nitroreducens DSM 19672 10009043 YP_004051101.1 CDS Calni_1027 NC_014758.1 1080538 1080765 D COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: ddf:DEFDS_0348 hypothetical protein; PFAM: protein of unknown function DUF37; SPTR: UPF0161 protein DEFDS_0348; manually curated; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; hypothetical protein 1080538..1080765 Calditerrivibrio nitroreducens DSM 19672 10009044 YP_004051102.1 CDS Calni_1028 NC_014758.1 1080790 1082304 D COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR019998: IPR020001: IPR001708: IPR013308; KEGG: ddf:DEFDS_0349 preprotein translocase YidC subunit; PFAM: 60 kDa inner membrane insertion protein; SPTR: Preprotein translocase YidC subunit; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; membrane protein insertase, yidc/oxa1 family 1080790..1082304 Calditerrivibrio nitroreducens DSM 19672 10009045 YP_004051103.1 CDS Calni_1029 NC_014758.1 1082314 1082967 D COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: ddf:DEFDS_0350 single-stranded nucleic acid binding protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein; SPTR: Single-stranded nucleic acid binding protein; PFAM: R3H domain; single-stranded nucleic acid binding r3h domain-containing protein 1082314..1082967 Calditerrivibrio nitroreducens DSM 19672 10009046 YP_004051104.1 CDS Calni_1030 NC_014758.1 1082964 1083221 D InterPro IPR011017: IPR007029; KEGG: ddf:DEFDS_0351 hypothetical protein; PFAM: YHS domain-containing protein; SMART: TRASH domain-containing protein; SPTR: uncharacterized protein; PFAM: YHS domain; yhs domain-containing protein 1082964..1083221 Calditerrivibrio nitroreducens DSM 19672 10009047 YP_004051105.1 CDS Calni_1031 NC_014758.1 1083226 1083870 D COGs: COG0176 Transaldolase; InterPro IPR004731: IPR001585: IPR018225; KEGG: ddf:DEFDS_0352 transaldolase; PFAM: Transaldolase; PRIAM: Transaldolase; SPTR: Transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; transaldolase 1083226..1083870 Calditerrivibrio nitroreducens DSM 19672 10009048 YP_004051106.1 CDS Calni_1032 NC_014758.1 1083904 1084413 R COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: trq:TRQ2_0548 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family; nitroreductase complement(1083904..1084413) Calditerrivibrio nitroreducens DSM 19672 10009049 YP_004051107.1 CDS Calni_1033 NC_014758.1 1084432 1084758 R InterPro IPR000551; KEGG: ddf:DEFDS_1192 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein; regulatory protein merr complement(1084432..1084758) Calditerrivibrio nitroreducens DSM 19672 10009050 YP_004051108.1 CDS Calni_1034 NC_014758.1 1084748 1085026 R COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119: IPR020816; KEGG: dap:Dacet_1204 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Histone family protein DNA-binding protein; PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; histone family protein DNA-binding protein complement(1084748..1085026) Calditerrivibrio nitroreducens DSM 19672 10009051 YP_004051109.1 CDS Calni_1035 NC_014758.1 1085082 1085975 R KEGG: ddf:DEFDS_1533 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1085082..1085975) Calditerrivibrio nitroreducens DSM 19672 10009052 YP_004051110.1 CDS Calni_1036 NC_014758.1 1086011 1088107 R COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR004540: IPR005225: IPR000795: IPR005517: IPR 000640; KEGG: ddf:DEFDS_1534 translation elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (ef-2/ef-g) complement(1086011..1088107) Calditerrivibrio nitroreducens DSM 19672 10009053 YP_004051111.1 CDS Calni_1037 NC_014758.1 1088489 1090501 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR001638: IPR003661: IPR003594: IPR 005467: IPR004358; KEGG: geo:Geob_3226 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; histidine kinase A domain protein; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase 1088489..1090501 Calditerrivibrio nitroreducens DSM 19672 10009055 YP_004051112.1 CDS Calni_1038 NC_014758.1 1090560 1090778 R InterPro IPR001911; KEGG: ddf:DEFDS_0196 30S ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 complement(1090560..1090778) Calditerrivibrio nitroreducens DSM 19672 10009056 YP_004051113.1 CDS Calni_1039 NC_014758.1 1090800 1093106 R COGs: COG0466 ATP-dependent Lon protease; InterPro IPR004815: IPR003111: IPR003593: IPR001984: IPR 003959: IPR008268; KEGG: ddf:DEFDS_0195 ATP-dependent Lon protease; PFAM: ATPase AAA; peptidase S16 lon domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP-dependent proteinase complement(1090800..1093106) Calditerrivibrio nitroreducens DSM 19672 10009057 YP_004051114.1 CDS Calni_1040 NC_014758.1 1093113 1094357 R COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterPro IPR004487: IPR003593: IPR010603: IPR013093: IPR 019489; KEGG: ddf:DEFDS_0194 ATP-dependent Clp protease ATP-binding subunit; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent Clp protease ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent clp protease ATP-binding subunit clpx complement(1093113..1094357) Calditerrivibrio nitroreducens DSM 19672 10009058 YP_004051115.1 CDS Calni_1041 NC_014758.1 1094413 1095000 R COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907: IPR018215; KEGG: ddf:DEFDS_0193 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent clp protease proteolytic subunit clpp complement(1094413..1095000) Calditerrivibrio nitroreducens DSM 19672 10009059 YP_004051116.1 CDS Calni_1042 NC_014758.1 1095015 1096346 R COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR005215: IPR001179: IPR008881: IPR008880; KEGG: ddf:DEFDS_0192 trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type; SPTR: Trigger factor; TIGRFAM: trigger factor; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; trigger factor complement(1095015..1096346) Calditerrivibrio nitroreducens DSM 19672 10009060 YP_004051117.1 CDS Calni_1043 NC_014758.1 1096496 1096945 R COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1576 heat shock protein Hsp20; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; heat shock protein hsp20 complement(1096496..1096945) Calditerrivibrio nitroreducens DSM 19672 10009061 YP_004051118.1 CDS Calni_1044 NC_014758.1 1097026 1098090 R COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638: IPR017200: IPR007197; KEGG: ddf:DEFDS_1457 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(1097026..1098090) Calditerrivibrio nitroreducens DSM 19672 10009062 YP_004051119.1 CDS Calni_1045 NC_014758.1 1098151 1099014 R COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260; KEGG: ddf:DEFDS_1460 hypothetical protein; PFAM: TonB domain; SPTR: uncharacterized protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; tonb family protein complement(1098151..1099014) Calditerrivibrio nitroreducens DSM 19672 10009063 YP_004051120.1 CDS Calni_1046 NC_014758.1 1099072 1099479 R InterPro IPR017515: IPR004360; KEGG: ddf:DEFDS_1935 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase; methylmalonyl-CoA epimerase complement(1099072..1099479) Calditerrivibrio nitroreducens DSM 19672 10009064 YP_004051121.1 CDS Calni_1047 NC_014758.1 1099488 1100924 R COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterPro IPR004413: IPR006075: IPR018027: IPR017958; KEGG: ddf:DEFDS_1934 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B; PFAM: GatB region; Asn/Gln amidotransferase; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit b complement(1099488..1100924) Calditerrivibrio nitroreducens DSM 19672 10009065 YP_004051122.1 CDS Calni_1048 NC_014758.1 1100921 1101331 R KEGG: ddf:DEFDS_1933 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1100921..1101331) Calditerrivibrio nitroreducens DSM 19672 10009066 YP_004051123.1 CDS Calni_1049 NC_014758.1 1101324 1102061 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR011814: IPR013216; KEGG: aby:ABAYE3002 biotin biosynthesis protein (BioC); PFAM: Methyltransferase type 11; SPTR: Biotin biosynthesis protein BioC; TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; biotin biosynthesis protein bioc complement(1101324..1102061) Calditerrivibrio nitroreducens DSM 19672 10009067 YP_004051124.1 CDS Calni_1050 NC_014758.1 1102048 1102707 R COGs: COG2830 conserved hypothetical protein; InterPro IPR007398; KEGG: hap:HAPS_1562 dithiobiotin synthetase; PFAM: protein of unknown function DUF452; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF452); hypothetical protein complement(1102048..1102707) Calditerrivibrio nitroreducens DSM 19672 10009068 YP_004051125.1 CDS Calni_1051 NC_014758.1 1102688 1103869 R COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839: IPR001917; KEGG: bvu:BVU_2780 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(1102688..1103869) Calditerrivibrio nitroreducens DSM 19672 10009069 YP_004051126.1 CDS Calni_1052 NC_014758.1 1103854 1105233 R COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005815: IPR005814; KEGG: cac:CA_C1362 adenosylmethionine-8-amino-7-oxononanoate aminotranferase; PFAM: aminotransferase class-III; SPTR: Adenosylmethionine-8-amino-7-oxononanoate aminotranferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; adenosylmethionine--8-amino-7-oxononanoate aminotransferase complement(1103854..1105233) Calditerrivibrio nitroreducens DSM 19672 10009070 YP_004051127.1 CDS Calni_1053 NC_014758.1 1105277 1106185 R COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; InterPro IPR003758; KEGG: ddf:DEFDS_0341 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; manually curated; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase complement(1105277..1106185) Calditerrivibrio nitroreducens DSM 19672 10009071 YP_004051128.1 CDS Calni_1054 NC_014758.1 1106192 1106437 R KEGG: dap:Dacet_1984 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1106192..1106437) Calditerrivibrio nitroreducens DSM 19672 10009072 YP_004051129.1 CDS Calni_1055 NC_014758.1 1106557 1107939 R COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR005854: IPR017932: IPR000583: IPR000836; KEGG: ddf:DEFDS_1603 amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase complement(1106557..1107939) Calditerrivibrio nitroreducens DSM 19672 10009073 YP_004051130.1 CDS Calni_1056 NC_014758.1 1107943 1110174 R COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR010074: IPR000728: IPR010918; KEGG: ddf:DEFDS_1604 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase 2; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase subunit ii complement(1107943..1110174) Calditerrivibrio nitroreducens DSM 19672 10009074 YP_004051131.1 CDS Calni_1057 NC_014758.1 1110171 1110875 R COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR010075: IPR017926: IPR011698; KEGG: ddf:DEFDS_1605 phosphoribosylformylglycinamidine synthase large subunit; PFAM: CobB/CobQ domain protein glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase, large subunit; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase subunit i complement(1110171..1110875) Calditerrivibrio nitroreducens DSM 19672 10009075 YP_004051132.1 CDS Calni_1058 NC_014758.1 1110872 1111114 R COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component; InterPro IPR003850; KEGG: ddf:DEFDS_1606 phosphoribosylformylglycinamidine synthase small subunit; PFAM: phosphoribosylformylglycinamidine synthetase PurS; SPTR: Phosphoribosylformylglycinamidine synthase, small subunit; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein; phosphoribosylformylglycinamidine synthase subunit PurS complement(1110872..1111114) Calditerrivibrio nitroreducens DSM 19672 10009076 YP_004051133.1 CDS Calni_1059 NC_014758.1 1111224 1112687 R COGs: COG0260 Leucyl aminopeptidase; InterPro IPR000819: IPR008283; KEGG: ddf:DEFDS_2072 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; SPTR: Leucyl aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; peptidase m17 leucyl aminopeptidase domain-containing protein complement(1111224..1112687) Calditerrivibrio nitroreducens DSM 19672 10009077 YP_004051134.1 CDS Calni_1060 NC_014758.1 1112700 1113080 R KEGG: cyh:Cyan8802_0792 MCP methyltransferase, CheR-type with Tpr repeats; SPTR: MCP methyltransferase, CheR-type with Tpr repeats; hypothetical protein complement(1112700..1113080) Calditerrivibrio nitroreducens DSM 19672 10009078 YP_004051135.1 CDS Calni_1061 NC_014758.1 1113093 1117415 R InterPro IPR019734: IPR013026: IPR003961; KEGG: tye:THEYE_A1901 tetratricopeptide repeat domain protein; SPTR: Tetratricopeptide repeat domain protein; hypothetical protein complement(1113093..1117415) Calditerrivibrio nitroreducens DSM 19672 10009079 YP_004051136.1 CDS Calni_1062 NC_014758.1 1117434 1119446 R KEGG: dap:Dacet_0341 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1117434..1119446) Calditerrivibrio nitroreducens DSM 19672 10009080 YP_004051137.1 CDS Calni_1063 NC_014758.1 1119687 1120091 R KEGG: ddf:DEFDS_1135 molybdopterin biosynthesis protein MoaE; SPTR: Molybdopterin biosynthesis protein MoaE; PFAM: MoaE protein; molybdopterin biosynthesis protein moae complement(1119687..1120091) Calditerrivibrio nitroreducens DSM 19672 10009082 YP_004051138.1 CDS Calni_1064 NC_014758.1 1120106 1122739 R COGs: COG1048 Aconitase A; InterPro IPR006249: IPR001030: IPR000573: IPR018136; KEGG: dat:HRM2_10610 AcnA; PFAM: aconitate hydratase domain-containing protein; SPTR: AcnA; TIGRFAM: aconitate hydratase 1; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1; aconitase complement(1120106..1122739) Calditerrivibrio nitroreducens DSM 19672 10009083 YP_004051139.1 CDS Calni_1065 NC_014758.1 1122872 1123219 D COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: ddf:DEFDS_1416 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: uncharacterized protein; PFAM: Cupin domain; cupin 2 barrel domain-containing protein 1122872..1123219 Calditerrivibrio nitroreducens DSM 19672 10009084 YP_004051140.1 CDS Calni_1066 NC_014758.1 1123238 1124065 D COGs: COG1651 Protein-disulfide isomerase; KEGG: ddf:DEFDS_1184 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1123238..1124065 Calditerrivibrio nitroreducens DSM 19672 10009085 YP_004051141.1 CDS Calni_1067 NC_014758.1 1124081 1125037 D COGs: COG0825 acetyl-CoA carboxylase alpha subunit; InterPro IPR001095: IPR011763: IPR020582: IPR000022; KEGG: ddf:DEFDS_1173 acetyl-CoA carboxylase carboxyl transferase subunit alpha; PFAM: acetyl-CoA carboxylase, alpha subunit, conserved region; carboxyl transferase; SPTR: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1124081..1125037 Calditerrivibrio nitroreducens DSM 19672 10009086 YP_004051142.1 CDS Calni_1068 NC_014758.1 1125041 1126741 D COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); InterPro IPR014763: IPR020667: IPR003594: IPR013507: IPR 014790: IPR014762; KEGG: ddf:DEFDS_1174 DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein mutl 1125041..1126741 Calditerrivibrio nitroreducens DSM 19672 10009087 YP_004051143.1 CDS Calni_1069 NC_014758.1 1126738 1127652 D COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022: IPR002627; KEGG: ddf:DEFDS_1175 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA); tRNA delta(2)-isopentenylpyrophosphate transferase 1126738..1127652 Calditerrivibrio nitroreducens DSM 19672 10009088 YP_004051144.1 CDS Calni_1070 NC_014758.1 1127641 1128204 R InterPro IPR001387: IPR013096; KEGG: ddf:DEFDS_0965 transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix; helix-turn-helix domain-containing protein complement(1127641..1128204) Calditerrivibrio nitroreducens DSM 19672 10009089 YP_004051145.1 CDS Calni_1071 NC_014758.1 1128247 1128519 R COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119: IPR020816; KEGG: ddf:DEFDS_0966 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: DNA-binding protein HU; PFAM: Bacterial DNA-binding protein; histone family protein DNA-binding protein complement(1128247..1128519) Calditerrivibrio nitroreducens DSM 19672 10009090 YP_004051146.1 CDS Calni_1072 NC_014758.1 1128657 1129763 R COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: ddf:DEFDS_P121 transposase; PFAM: transposase mutator type; SPTR: Transposase; PFAM: Transposase, Mutator family; transposase mutator type complement(1128657..1129763) Calditerrivibrio nitroreducens DSM 19672 10009091 YP_004051147.1 CDS Calni_1073 NC_014758.1 1129919 1131184 R COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: cbc:CbuK_2005 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); three-deoxy-d-manno-octulosonic-acid transferase domain-containing protein complement(1129919..1131184) Calditerrivibrio nitroreducens DSM 19672 10009092 YP_004051148.1 CDS Calni_1074 NC_014758.1 1131209 1132288 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mca:MCA2126 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1131209..1132288) Calditerrivibrio nitroreducens DSM 19672 10009093 YP_004051149.1 CDS Calni_1075 NC_014758.1 1132291 1133316 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: azo:azo2321 lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; SPTR: Lipopolysaccharide heptosyltransferase I; PFAM: Glycosyltransferase family 9 (heptosyltransferase); glycosyl transferase family protein complement(1132291..1133316) Calditerrivibrio nitroreducens DSM 19672 10009094 YP_004051150.1 CDS Calni_1076 NC_014758.1 1133313 1134314 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: nwa:Nwat_0594 glycosyl transferase family 9; PFAM: glycosyl transferase family 9; SPTR: Glycosyl transferase family 9; PFAM: Glycosyltransferase family 9 (heptosyltransferase); glycosyl transferase family protein complement(1133313..1134314) Calditerrivibrio nitroreducens DSM 19672 10009095 YP_004051151.1 CDS Calni_1077 NC_014758.1 1134307 1135578 R InterPro IPR007016; KEGG: hin:HI0874 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Possible O-antigen ligase; PFAM: O-Antigen ligase; o-antigen polymerase complement(1134307..1135578) Calditerrivibrio nitroreducens DSM 19672 10009096 YP_004051152.1 CDS Calni_1078 NC_014758.1 1135614 1136444 R KEGG: tet:TTHERM_00384860 La domain containing protein; SPTR: Cobalt import ATP-binding protein CbiO 2; hypothetical protein complement(1135614..1136444) Calditerrivibrio nitroreducens DSM 19672 10009097 YP_004051153.1 CDS Calni_1079 NC_014758.1 1136485 1137765 R COGs: COG0151 Phosphoribosylamine-glycine ligase; InterPro IPR000115: IPR011761: IPR020562: IPR020561: IPR 020560: IPR020559; KEGG: ddf:DEFDS_1188 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase complement(1136485..1137765) Calditerrivibrio nitroreducens DSM 19672 10009098 YP_004051154.1 CDS Calni_1080 NC_014758.1 1137785 1139335 R COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR002695: IPR013982: IPR011607; KEGG: ddf:DEFDS_1187 bifunctional purine biosynthesis protein PurH; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: Bifunctional purine biosynthesis protein PurH; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; imp cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase complement(1137785..1139335) Calditerrivibrio nitroreducens DSM 19672 10009099 YP_004051155.1 CDS Calni_1081 NC_014758.1 1139354 1139857 R COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: ddf:DEFDS_1186 lipoprotein signal peptidase II; PFAM: peptidase A8 signal peptidase II; SPTR: Lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; signal peptidase ii complement(1139354..1139857) Calditerrivibrio nitroreducens DSM 19672 10009100 YP_004051156.1 CDS Calni_1082 NC_014758.1 1139871 1142666 R COGs: COG0060 Isoleucyl-tRNA synthetase; InterPro IPR002301: IPR015905: IPR002300: IPR013155: IPR 010663: IPR001412; KEGG: ddf:DEFDS_1185 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(1139871..1142666) Calditerrivibrio nitroreducens DSM 19672 10009101 YP_004051157.1 CDS Calni_1083 NC_014758.1 1142773 1143702 R COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: dap:Dacet_2223 ROK family protein; PFAM: ROK family protein; SPTR: ROK family protein; manually curated; PFAM: ROK family; rok family protein complement(1142773..1143702) Calditerrivibrio nitroreducens DSM 19672 10009102 YP_004051158.1 CDS Calni_1084 NC_014758.1 1143683 1144720 R COGs: COG1533 DNA repair photolyase; KEGG: ddf:DEFDS_1338 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1143683..1144720) Calditerrivibrio nitroreducens DSM 19672 10009103 YP_004051159.1 CDS Calni_1085 NC_014758.1 1144707 1145489 R KEGG: ddf:DEFDS_1339 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1144707..1145489) Calditerrivibrio nitroreducens DSM 19672 10009104 YP_004051160.1 CDS Calni_1086 NC_014758.1 1145486 1146463 R COGs: COG0552 Signal recognition particle GTPase; InterPro IPR004390: IPR003593: IPR013822: IPR000897; KEGG: ddf:DEFDS_1340 signal recognition particle receptor FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; SPTR: Signal recognition particle receptor FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein ftsy complement(1145486..1146463) Calditerrivibrio nitroreducens DSM 19672 10009105 YP_004051161.1 CDS Calni_1087 NC_014758.1 1146486 1148519 R COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016: IPR014017: IPR000212; KEGG: ddf:DEFDS_1949 ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; SPTR: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; ATP-dependent DNA helicase pcra complement(1146486..1148519) Calditerrivibrio nitroreducens DSM 19672 10009106 YP_004051162.1 CDS Calni_1088 NC_014758.1 1148512 1150359 R COGs: COG1166 Arginine decarboxylase (spermidine biosynthesis); InterPro IPR002985: IPR000183; KEGG: wsu:WS0554 arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic; arginine decarboxylase complement(1148512..1150359) Calditerrivibrio nitroreducens DSM 19672 10009107 YP_004051163.1 CDS Calni_1089 NC_014758.1 1150628 1151413 D COGs: COG1414 Transcriptional regulator; InterPro IPR005471: IPR014757; KEGG: ddf:DEFDS_0786 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: Transcriptional regulator, IclR family; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; IclR family transcriptional regulator 1150628..1151413 Calditerrivibrio nitroreducens DSM 19672 10009108 YP_004051164.1 CDS Calni_1090 NC_014758.1 1151445 1152734 R COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR006311: IPR013027: IPR015323; KEGG: dap:Dacet_1681 flavocytochrome c sulphide dehydrogenase flavin-binding protein; PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Flavocytochrome c sulphide dehydrogenase flavin-binding protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; flavocytochrome c sulfide dehydrogenase flavin-binding protein complement(1151445..1152734) Calditerrivibrio nitroreducens DSM 19672 10009109 YP_004051165.1 CDS Calni_1091 NC_014758.1 1152744 1153316 R COGs: COG2863 Cytochrome c553; InterPro IPR009056: IPR003088; KEGG: dap:Dacet_1682 cytochrome c553-like protein; PFAM: cytochrome c class I; SPTR: Cytochrome c553-like protein; PFAM: Cytochrome c; cytochrome c class i complement(1152744..1153316) Calditerrivibrio nitroreducens DSM 19672 10009110 YP_004051166.1 CDS Calni_1092 NC_014758.1 1153326 1155026 R COGs: COG1331 Highly conserved protein containing a thioredoxin domain; KEGG: ddf:DEFDS_1296 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF255; hypothetical protein complement(1153326..1155026) Calditerrivibrio nitroreducens DSM 19672 10009111 YP_004051167.1 CDS Calni_1093 NC_014758.1 1155358 1156467 R COGs: COG2461 conserved hypothetical protein; KEGG: ddf:DEFDS_0080 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: PAS domain S-box; hypothetical protein complement(1155358..1156467) Calditerrivibrio nitroreducens DSM 19672 10009112 YP_004051168.1 CDS Calni_1094 NC_014758.1 1156679 1156846 R InterPro IPR000014: IPR013767; KEGG: sti:Sthe_3075 multi-sensor signal transduction histidine kinase; PFAM: PAS fold domain protein; SPTR: Sensory box/GGDEF/EAL family protein; PFAM: PAS fold; pas fold domain-containing protein complement(1156679..1156846) Calditerrivibrio nitroreducens DSM 19672 10009113 YP_004051169.1 CDS Calni_1095 NC_014758.1 1156874 1157563 R COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR001228: IPR018294; KEGG: ddf:DEFDS_1001 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase complement(1156874..1157563) Calditerrivibrio nitroreducens DSM 19672 10009114 YP_004051170.1 CDS Calni_1096 NC_014758.1 1157560 1158540 R COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR006596: IPR002792: IPR002716; KEGG: ddf:DEFDS_1000 hypothetical protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; SPTR: uncharacterized protein; PFAM: TRAM domain; PIN domain; pilt protein domain-containing protein complement(1157560..1158540) Calditerrivibrio nitroreducens DSM 19672 10009115 YP_004051171.1 CDS Calni_1097 NC_014758.1 1158632 1159435 R InterPro IPR003425; KEGG: ddf:DEFDS_0998 hypothetical protein; PFAM: protein of unknown function YGGT; SPTR: uncharacterized protein; PFAM: YGGT family; hypothetical protein complement(1158632..1159435) Calditerrivibrio nitroreducens DSM 19672 10009116 YP_004051172.1 CDS Calni_1098 NC_014758.1 1159445 1160134 R COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078: IPR001608; KEGG: ddf:DEFDS_0997 hypothetical protein; PFAM: alanine racemase domain protein; SPTR: uncharacterized protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; alanine racemase complement(1159445..1160134) Calditerrivibrio nitroreducens DSM 19672 10009117 YP_004051173.1 CDS Calni_1099 NC_014758.1 1160131 1160859 R COGs: COG1496 conserved hypothetical protein; InterPro IPR003730; KEGG: ddf:DEFDS_0996 hypothetical protein; PFAM: protein of unknown function DUF152; SPTR: uncharacterized protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein complement(1160131..1160859) Calditerrivibrio nitroreducens DSM 19672 10009118 YP_004051174.1 CDS Calni_1100 NC_014758.1 1160835 1162397 R COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: ddf:DEFDS_0995 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(1160835..1162397) Calditerrivibrio nitroreducens DSM 19672 10009119 YP_004051175.1 CDS Calni_1101 NC_014758.1 1162375 1163205 R COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: dps:DP0336 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Related to 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase complement(1162375..1163205) Calditerrivibrio nitroreducens DSM 19672 10009120 YP_004051176.1 CDS Calni_1102 NC_014758.1 1163238 1165043 R COGs: COG3276 Selenocysteine-specific translation elongation factor; InterPro IPR005225: IPR004535: IPR000795: IPR004161; KEGG: ddf:DEFDS_0272 selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; SPTR: Selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU; selenocysteine-specific translation elongation factor complement(1163238..1165043) Calditerrivibrio nitroreducens DSM 19672 10009121 YP_004051177.1 CDS Calni_1103 NC_014758.1 1165051 1166421 R COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR004534: IPR018319; KEGG: ddf:DEFDS_0273 L-seryl-tRNA(Sec) selenium transferase; PFAM: Pyridoxal phosphate-dependent transferase; PRIAM: L-seryl-tRNA(Sec) selenium transferase; SPTR: L-seryl-tRNA(Sec) selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase; l-seryl-tRNA selenium transferase complement(1165051..1166421) Calditerrivibrio nitroreducens DSM 19672 10009122 YP_004051178.1 CDS Calni_1104 NC_014758.1 1166475 1167566 D COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168: IPR017439: IPR002933: IPR011650; KEGG: ddf:DEFDS_1806 N-acetyl-L-amino acid amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: N-acetyl-L-amino acid amidohydrolase; TIGRFAM: amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase 1166475..1167566 Calditerrivibrio nitroreducens DSM 19672 10009123 YP_004051179.1 CDS Calni_1105 NC_014758.1 1167559 1168671 D COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: ddf:DEFDS_1805 DNA processing protein A; PFAM: SMF family protein; SPTR: DNA processing protein A; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; DNA protecting protein dpra 1167559..1168671 Calditerrivibrio nitroreducens DSM 19672 10009124 YP_004051180.1 CDS Calni_1106 NC_014758.1 1168664 1169077 D InterPro IPR007456; KEGG: dap:Dacet_0848 hypothetical protein; PFAM: protein of unknown function DUF494; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF494); hypothetical protein 1168664..1169077 Calditerrivibrio nitroreducens DSM 19672 10009125 YP_004051181.1 CDS Calni_1107 NC_014758.1 1169090 1171441 D COGs: COG0550 Topoisomerase IA; InterPro IPR005733: IPR006154: IPR003601: IPR003602: IPR 000380: IPR006171: IPR013497: IPR013498; KEGG: ddf:DEFDS_1803 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase i 1169090..1171441 Calditerrivibrio nitroreducens DSM 19672 10009126 YP_004051182.1 CDS Calni_1108 NC_014758.1 1171416 1172738 D COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation; InterPro IPR004417: IPR013027: IPR002218; KEGG: ddf:DEFDS_1802 glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing); SPTR:Methylenetetrahydrofolate--tRNA-(uracil-5-)-me thyltransferasetrmFO; TIGRFAM: gid protein; PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase; hypothetical protein 1171416..1172738 Calditerrivibrio nitroreducens DSM 19672 10009127 YP_004051183.1 CDS Calni_1109 NC_014758.1 1172735 1173637 D COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: ddf:DEFDS_1801 tyrosine recombinase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Tyrosine recombinase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC; integrase family protein 1172735..1173637 Calditerrivibrio nitroreducens DSM 19672 10009128 YP_004051184.1 CDS Calni_1110 NC_014758.1 1173638 1174735 R COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: cth:Cthe_0250 hypothetical protein; PFAM: protein of unknown function UPF0027; SPTR: uncharacterized protein; PFAM: Uncharacterized protein family UPF0027; hypothetical protein complement(1173638..1174735) Calditerrivibrio nitroreducens DSM 19672 10009129 YP_004051185.1 CDS Calni_1111 NC_014758.1 1174816 1175235 D KEGG: tye:THEYE_A1944 lipoprotein, putative; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3617); lipoprotein 1174816..1175235 Calditerrivibrio nitroreducens DSM 19672 10009130 YP_004051186.1 CDS Calni_1112 NC_014758.1 1175317 1175856 R InterPro IPR004570: IPR000462; KEGG: pmx:PERMA_1929 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(1175317..1175856) Calditerrivibrio nitroreducens DSM 19672 10009131 YP_004051187.1 CDS Calni_1113 NC_014758.1 1175879 1177561 D COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638: IPR013704: IPR020612; KEGG: dat:HRM2_33330 Fe-S oxidoreductase family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Fe-S oxidoreductase; PFAM: Radical SAM superfamily; Radical SAM N-terminal; radical SAM domain-containing protein 1175879..1177561 Calditerrivibrio nitroreducens DSM 19672 10009132 YP_004051188.1 CDS Calni_1114 NC_014758.1 1177551 1178426 R InterPro IPR000620; KEGG: ddf:DEFDS_0618 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein complement(1177551..1178426) Calditerrivibrio nitroreducens DSM 19672 10009133 YP_004051189.1 CDS Calni_1115 NC_014758.1 1178504 1178737 R KEGG: ttm:Tthe_0744 alkylmercury lyase; SPTR: alkylmercury lyase; PFAM: Protein of unknown function (DUF2703); alkylmercury lyase complement(1178504..1178737) Calditerrivibrio nitroreducens DSM 19672 10009134 YP_004051190.1 CDS Calni_1116 NC_014758.1 1178741 1179094 R COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR003190; KEGG: ddf:DEFDS_0845 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; l-aspartate 1-decarboxylase complement(1178741..1179094) Calditerrivibrio nitroreducens DSM 19672 10009135 YP_004051191.1 CDS Calni_1117 NC_014758.1 1179096 1179941 R COGs: COG0414 Panthothenate synthetase; InterPro IPR003721: IPR004821; KEGG: ddf:DEFDS_0844 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; pantothenate synthetase complement(1179096..1179941) Calditerrivibrio nitroreducens DSM 19672 10009136 YP_004051192.1 CDS Calni_1118 NC_014758.1 1179945 1180757 R COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: ddf:DEFDS_0843 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; ketopantoate hydroxymethyltransferase complement(1179945..1180757) Calditerrivibrio nitroreducens DSM 19672 10009137 YP_004051193.1 CDS Calni_1119 NC_014758.1 1180905 1181441 R InterPro IPR001387: IPR013096; KEGG: ddf:DEFDS_1531 XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Cupin domain; Helix-turn-helix; MerR family transcriptional regulator complement(1180905..1181441) Calditerrivibrio nitroreducens DSM 19672 10009138 YP_004051194.1 CDS Calni_1120 NC_014758.1 1181488 1182534 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR005467: IPR004358; KEGG: mhu:Mhun_2689 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Cache sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 1181488..1182534 Calditerrivibrio nitroreducens DSM 19672 10009139 YP_004051195.1 CDS Calni_1121 NC_014758.1 1182527 1183063 D COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: dap:Dacet_1433 hypothetical protein; SPTR: uncharacterized protein; PFAM: Bacterial transferase hexapeptide (three repeats); hypothetical protein 1182527..1183063 Calditerrivibrio nitroreducens DSM 19672 10009140 YP_004051196.1 CDS Calni_1122 NC_014758.1 1183144 1184433 R COGs: COG0148 Enolase; InterPro IPR000941: IPR020811: IPR020810: IPR020809; KEGG: ddf:DEFDS_0201 enolase; PFAM: Enolase-like; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase complement(1183144..1184433) Calditerrivibrio nitroreducens DSM 19672 10009141 YP_004051197.1 CDS Calni_1123 NC_014758.1 1184526 1185632 D InterPro IPR007197; KEGG: ddf:DEFDS_0200 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: uncharacterized protein; radical SAM domain-containing protein 1184526..1185632 Calditerrivibrio nitroreducens DSM 19672 10009142 YP_004051198.1 CDS Calni_1124 NC_014758.1 1185649 1186380 D KEGG: ddf:DEFDS_0199 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1185649..1186380 Calditerrivibrio nitroreducens DSM 19672 10009143 YP_004051199.1 CDS Calni_1125 NC_014758.1 1186384 1187943 D COGs: COG0029 Aspartate oxidase; InterPro IPR005288: IPR013027: IPR003953; KEGG: ddf:DEFDS_0198 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; l-aspartate oxidase 1186384..1187943 Calditerrivibrio nitroreducens DSM 19672 10009144 YP_004051200.1 CDS Calni_1126 NC_014758.1 1187915 1188589 D COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: ddf:DEFDS_0197 hypothetical protein; PFAM: protein of unknown function DUF752; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF752); hypothetical protein 1187915..1188589 Calditerrivibrio nitroreducens DSM 19672 10009145 YP_004051201.1 CDS Calni_1127 NC_014758.1 1188889 1189506 D COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: gme:Gmet_3132 hypothetical protein; PFAM: Putitive phosphate transport regulator; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153; phosphate transport regulator 1188889..1189506 Calditerrivibrio nitroreducens DSM 19672 10009147 YP_004051202.1 CDS Calni_1128 NC_014758.1 1189499 1190500 D COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: gsu:GSU0389 phosphate transporter, putative; PFAM: phosphate transporter; SPTR: Phosphate transporter, putative; PFAM: Phosphate transporter family; phosphate transporter 1189499..1190500 Calditerrivibrio nitroreducens DSM 19672 10009148 YP_004051203.1 CDS Calni_1129 NC_014758.1 1190524 1192146 R COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006236: IPR006139: IPR006140: IPR002912; KEGG: ddf:DEFDS_0857 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; SPTR: D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase complement(1190524..1192146) Calditerrivibrio nitroreducens DSM 19672 10009149 YP_004051204.1 CDS Calni_1130 NC_014758.1 1192221 1193231 R KEGG: ddf:DEFDS_0761 hypothetical protein; SPTR: uncharacterized protein; PFAM: Curli production assembly/transport component CsgG; hypothetical protein complement(1192221..1193231) Calditerrivibrio nitroreducens DSM 19672 10009150 YP_004051205.1 CDS Calni_1131 NC_014758.1 1193300 1194352 D COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR004588: IPR016425; KEGG: ddf:DEFDS_1800 4-hydroy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein; SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1193300..1194352 Calditerrivibrio nitroreducens DSM 19672 10009151 YP_004051206.1 CDS Calni_1132 NC_014758.1 1194356 1195243 D COGs: COG2962 permease; InterPro IPR004626: IPR000620; KEGG: dvm:DvMF_2967 RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; SPTR: RarD protein, DMT superfamily transporter; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: EamA-like transporter family; TIGRFAM: rarD protein; rard protein, dmt superfamily transporter 1194356..1195243 Calditerrivibrio nitroreducens DSM 19672 10009152 YP_004051207.1 CDS Calni_1133 NC_014758.1 1195329 1195772 D COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: dap:Dacet_1707 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; heat shock protein hsp20 1195329..1195772 Calditerrivibrio nitroreducens DSM 19672 10009153 YP_004051208.1 CDS Calni_1134 NC_014758.1 1195815 1196921 D COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR012724: IPR001623: IPR001305: IPR003095: IPR 002939: IPR018253; KEGG: ddf:DEFDS_1927 molecular chaperone DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Molecular chaperone DnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain (4 repeats); DnaJ domain; DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ; chaperone protein dnaj 1195815..1196921 Calditerrivibrio nitroreducens DSM 19672 10009154 YP_004051209.1 CDS Calni_1135 NC_014758.1 1196935 1197309 D InterPro IPR000551; KEGG: ddf:DEFDS_1926 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein; MerR family transcriptional regulator 1196935..1197309 Calditerrivibrio nitroreducens DSM 19672 10009155 YP_004051210.1 CDS Calni_1136 NC_014758.1 1197313 1199913 D COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR017730: IPR003593: IPR001270: IPR004176: IPR 003959: IPR013093: IPR019489: IPR018368; KEGG: ddf:DEFDS_1925 ATP-dependent Clp protease ATP-binding subunit ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATP-dependent chaperone clpb 1197313..1199913 Calditerrivibrio nitroreducens DSM 19672 10009156 YP_004051211.1 CDS Calni_1137 NC_014758.1 1200043 1201026 D COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR014284: IPR000943: IPR009042: IPR007627: IPR 007624: IPR007630; KEGG: ddf:DEFDS_1924 DNA-directed RNA polymerase sigma 70 factor; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma 70 subunit, rpod subfamily 1200043..1201026 Calditerrivibrio nitroreducens DSM 19672 10009157 YP_004051212.1 CDS Calni_1138 NC_014758.1 1201039 1201683 D COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V); InterPro IPR007581: IPR000276; KEGG: ddf:DEFDS_0855 deoxyribonuclease V; PFAM: Endonuclease V; PRIAM: Deoxyribonuclease V; SPTR: Deoxyribonuclease V; PFAM: Endonuclease V; deoxyribonuclease v 1201039..1201683 Calditerrivibrio nitroreducens DSM 19672 10009158 YP_004051213.1 CDS Calni_1139 NC_014758.1 1201774 1202643 D InterPro IPR003856; KEGG: ddf:DEFDS_0398 hypothetical protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: uncharacterized protein; PFAM: Chain length determinant protein; lipopolysaccharide biosynthesis protein 1201774..1202643 Calditerrivibrio nitroreducens DSM 19672 10009159 YP_004051214.1 CDS Calni_1140 NC_014758.1 1202849 1203358 R KEGG: pay:PAU_01741 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1202849..1203358) Calditerrivibrio nitroreducens DSM 19672 10009160 YP_004051215.1 CDS Calni_1141 NC_014758.1 1203462 1204730 R COGs: COG1373 ATPase (AAA+ superfamily); KEGG: tye:THEYE_A0178 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1203462..1204730) Calditerrivibrio nitroreducens DSM 19672 10009161 YP_004051216.1 CDS Calni_1142 NC_014758.1 1204876 1206186 R InterPro IPR004256; KEGG: ssm:Spirs_0726 ATPase; PFAM: DUF234 DEXX-box ATPase; SPTR: Predicted protein; PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; ATPase complement(1204876..1206186) Calditerrivibrio nitroreducens DSM 19672 10009162 YP_004051217.1 CDS Calni_1143 NC_014758.1 1206364 1207446 R COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: ddf:DEFDS_0384 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase family 4; glycosyltransferase complement(1206364..1207446) Calditerrivibrio nitroreducens DSM 19672 10009163 YP_004051218.1 CDS Calni_1144 NC_014758.1 1207894 1208721 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mma:MM_1141 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: glycosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(1207894..1208721) Calditerrivibrio nitroreducens DSM 19672 10009164 YP_004051219.1 CDS Calni_1145 NC_014758.1 1208839 1209036 D hypothetical protein 1208839..1209036 Calditerrivibrio nitroreducens DSM 19672 10009165 YP_004051220.1 CDS Calni_1147 NC_014758.1 1209699 1210538 R InterPro IPR001173; KEGG: sdl:Sdel_1773 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(1209699..1210538) Calditerrivibrio nitroreducens DSM 19672 10009167 YP_004051221.1 CDS Calni_1148 NC_014758.1 1210535 1211344 R InterPro IPR002516; KEGG: sdl:Sdel_1774 glycosyl transferase family 11; PFAM: glycosyl transferase family 11; SPTR: Glycosyl transferase family 11; PFAM: Glycosyl transferase family 11; glycosyl transferase family protein complement(1210535..1211344) Calditerrivibrio nitroreducens DSM 19672 10009168 YP_004051222.1 CDS Calni_1149 NC_014758.1 1211338 1212129 R InterPro IPR005076; KEGG: sdl:Sdel_1775 glycosyltransferase; PFAM: glycosyl transferase family 6; SPTR: glycosyltransferase; PFAM: Glycosyltransferase family 6; glycosyl transferase family protein complement(1211338..1212129) Calditerrivibrio nitroreducens DSM 19672 10009169 YP_004051223.1 CDS Calni_1150 NC_014758.1 1212354 1212464 R hypothetical protein complement(1212354..1212464) Calditerrivibrio nitroreducens DSM 19672 10009170 YP_004051224.1 CDS Calni_1151 NC_014758.1 1212572 1213150 R KEGG: dba:Dbac_2552 glycosyl transferase family 11; SPTR: Glycosyl transferase family 11; hypothetical protein complement(1212572..1213150) Calditerrivibrio nitroreducens DSM 19672 10009171 YP_004051225.1 CDS Calni_1152 NC_014758.1 1213565 1213876 R KEGG: lbf:LBF_0316 hydrolase; SPTR: TonB-dependent receptor, plug; hypothetical protein complement(1213565..1213876) Calditerrivibrio nitroreducens DSM 19672 10009172 YP_004051226.1 CDS Calni_1154 NC_014758.1 1214677 1215615 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tel:tll0995 glycosly transferase; PFAM: glycosyl transferase family 2; SPTR: Tll0995 protein; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(1214677..1215615) Calditerrivibrio nitroreducens DSM 19672 10009174 YP_004051227.1 CDS Calni_1155 NC_014758.1 1215612 1216520 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: tel:tll0995 glycosly transferase; PFAM: glycosyl transferase family 2; SPTR: Tll0995 protein; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(1215612..1216520) Calditerrivibrio nitroreducens DSM 19672 10009175 YP_004051228.1 CDS Calni_1156 NC_014758.1 1216529 1218037 R COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: slt:Slit_2892 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1216529..1218037) Calditerrivibrio nitroreducens DSM 19672 10009176 YP_004051229.1 CDS Calni_1157 NC_014758.1 1218030 1218662 R KEGG: tva:TVAG_282190 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1218030..1218662) Calditerrivibrio nitroreducens DSM 19672 10009177 YP_004051230.1 CDS Calni_1158 NC_014758.1 1218670 1219440 R COGs: COG3510 Cephalosporin hydroxylase; KEGG: pat:Patl_3055 cephalosporin hydroxylase; SPTR: Cephalosporin hydroxylase; PFAM: Cephalosporin hydroxylase; cephalosporin hydroxylase complement(1218670..1219440) Calditerrivibrio nitroreducens DSM 19672 10009178 YP_004051231.1 CDS Calni_1159 NC_014758.1 1219433 1220491 R KEGG: ppw:PputW619_3714 methyltransferase type 11; SPTR: NDP-hexose methyltransferase protein; PFAM: C-methyltransferase; type 11 methyltransferase complement(1219433..1220491) Calditerrivibrio nitroreducens DSM 19672 10009179 YP_004051232.1 CDS Calni_1160 NC_014758.1 1220488 1221327 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: alv:Alvin_1936 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; nad-dependent epimerase/dehydratase complement(1220488..1221327) Calditerrivibrio nitroreducens DSM 19672 10009180 YP_004051233.1 CDS Calni_1161 NC_014758.1 1221324 1222550 R InterPro IPR013630: IPR013217: IPR013691; KEGG: syn:slr1610 hypothetical protein; PFAM: C-methyltransferase; Methyltransferase domain protein; Methyltransferase type 12; SPTR: Slr1610 protein; PFAM: C-methyltransferase; Methyltransferase domain; Hypothetical methyltransferase; c-methyltransferase complement(1221324..1222550) Calditerrivibrio nitroreducens DSM 19672 10009181 YP_004051234.1 CDS Calni_1162 NC_014758.1 1222547 1223110 R COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: acr:Acry_0593 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: DTDP-6-deoxy-L-mannose-dehydrogenase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1222547..1223110) Calditerrivibrio nitroreducens DSM 19672 10009182 YP_004051235.1 CDS Calni_1163 NC_014758.1 1223095 1224168 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR013445: IPR001509; KEGG: acr:Acry_0592 CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: CDP-glucose 4,6-dehydratase; TIGRFAM: CDP-glucose 4,6-dehydratase; manually curated; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase; cdp-glucose 4,6-dehydratase complement(1223095..1224168) Calditerrivibrio nitroreducens DSM 19672 10009183 YP_004051236.1 CDS Calni_1164 NC_014758.1 1224171 1224956 R COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR013446: IPR005835; KEGG: tye:THEYE_A1515 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate cytidylyltransferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase complement(1224171..1224956) Calditerrivibrio nitroreducens DSM 19672 10009184 YP_004051237.1 CDS Calni_1165 NC_014758.1 1225414 1225845 R KEGG: bpf:BpOF4_06605 hypothetical protein; SPTR: uncharacterized protein; PFAM: S23 ribosomal protein; hypothetical protein complement(1225414..1225845) Calditerrivibrio nitroreducens DSM 19672 10009185 YP_004051238.1 CDS Calni_1166 NC_014758.1 1225817 1227088 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: nam:NAMH_1667 GDP-L-fucose synthase 1; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: GDP-L-fucose synthase; SPTR: GDP-L-fucose synthase 1; PFAM: NAD dependent epimerase/dehydratase family; gdp-l-fucose synthase complement(1225817..1227088) Calditerrivibrio nitroreducens DSM 19672 10009186 YP_004051239.1 CDS Calni_1167 NC_014758.1 1227136 1227513 R InterPro IPR012657; KEGG: ant:Arnit_2573 hypothetical protein; SPTR: uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436; hypothetical protein complement(1227136..1227513) Calditerrivibrio nitroreducens DSM 19672 10009187 YP_004051240.1 CDS Calni_1168 NC_014758.1 1227587 1228771 R COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368: IPR001509: IPR020904; KEGG: nam:NAMH_1668 GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase complement(1227587..1228771) Calditerrivibrio nitroreducens DSM 19672 10009188 YP_004051241.1 CDS Calni_1170 NC_014758.1 1229848 1230357 R KEGG: ttm:Tthe_2645 protein of unknown function DUF16; SPTR: uncharacterized protein; hypothetical protein complement(1229848..1230357) Calditerrivibrio nitroreducens DSM 19672 10009190 YP_004051242.1 CDS Calni_1171 NC_014758.1 1230542 1231972 R COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR003362; KEGG: cpi:Cpin_2376 undecaprenyl-phosphate glucose phosphotransferase; PFAM: sugar transferase; SPTR: Undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(1230542..1231972) Calditerrivibrio nitroreducens DSM 19672 10009191 YP_004051243.1 CDS Calni_1172 NC_014758.1 1232000 1233130 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ccv:CCV52592_0294 aldehyde dehydrogenase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1232000..1233130) Calditerrivibrio nitroreducens DSM 19672 10009192 YP_004051244.1 CDS Calni_1173 NC_014758.1 1233131 1234219 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dtu:Dtur_0347 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1233131..1234219) Calditerrivibrio nitroreducens DSM 19672 10009193 YP_004051245.1 CDS Calni_1174 NC_014758.1 1234234 1235451 R KEGG: she:Shewmr4_1324 hypothetical protein; SPTR: Wzy; hypothetical protein complement(1234234..1235451) Calditerrivibrio nitroreducens DSM 19672 10009194 YP_004051246.1 CDS Calni_1175 NC_014758.1 1235504 1236523 R COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: pab:PAB0795 rhamnosyl transferase related protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(1235504..1236523) Calditerrivibrio nitroreducens DSM 19672 10009195 YP_004051247.1 CDS Calni_1176 NC_014758.1 1236510 1237172 R InterPro IPR013216; KEGG: dth:DICTH_0152 O-antigen biosynthesis protein; possible glycosyltransferase; possible methyltransferase; PFAM: Methyltransferase type 11; SPTR: Glycosyl transferase family 2; PFAM: Methyltransferase domain; type 11 methyltransferase complement(1236510..1237172) Calditerrivibrio nitroreducens DSM 19672 10009196 YP_004051248.1 CDS Calni_1177 NC_014758.1 1237144 1238427 R COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: gka:GK3317 O-antigen transporter; PFAM: polysaccharide biosynthesis protein; SPTR: O-antigen transporter; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1237144..1238427) Calditerrivibrio nitroreducens DSM 19672 10009197 YP_004051249.1 CDS Calni_1178 NC_014758.1 1238550 1239686 R COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: tye:THEYE_A0499 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(1238550..1239686) Calditerrivibrio nitroreducens DSM 19672 10009198 YP_004051250.1 CDS Calni_1179 NC_014758.1 1239819 1240919 R InterPro IPR001296; KEGG: bpy:Bphyt_0885 glycosyl transferase family 2; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1239819..1240919) Calditerrivibrio nitroreducens DSM 19672 10009199 YP_004051251.1 CDS Calni_1180 NC_014758.1 1240975 1242090 R COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888: IPR001509; KEGG: ssm:Spirs_0682 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(1240975..1242090) Calditerrivibrio nitroreducens DSM 19672 10009200 YP_004051252.1 CDS Calni_1181 NC_014758.1 1242095 1242991 R COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: bhy:BHWA1_02693 dTDP-4-keto-L-rhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; PRIAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-keto-L-rhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; manually curated; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(1242095..1242991) Calditerrivibrio nitroreducens DSM 19672 10009201 YP_004051253.1 CDS Calni_1182 NC_014758.1 1242988 1243545 R COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: ssm:Spirs_4246 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1242988..1243545) Calditerrivibrio nitroreducens DSM 19672 10009202 YP_004051254.1 CDS Calni_1183 NC_014758.1 1243547 1244413 R COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907: IPR005835; KEGG: tit:Thit_0653 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase complement(1243547..1244413) Calditerrivibrio nitroreducens DSM 19672 10009203 YP_004051255.1 CDS Calni_1184 NC_014758.1 1244738 1246165 R COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR006375: IPR005835: IPR001538; KEGG: nam:NAMH_1670 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(1244738..1246165) Calditerrivibrio nitroreducens DSM 19672 10009204 YP_004051256.1 CDS Calni_1185 NC_014758.1 1246518 1247297 R COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: ddf:DEFDS_1279 hypothetical protein; PFAM: protein of unknown function DUF178; SPTR: uncharacterized protein; PFAM: periplasminc binding protein (DUF178); hypothetical protein complement(1246518..1247297) Calditerrivibrio nitroreducens DSM 19672 10009206 YP_004051257.1 CDS Calni_1186 NC_014758.1 1247298 1247843 R COGs: COG1971 membrane protein; InterPro IPR003810; KEGG: ddf:DEFDS_1280 hypothetical protein; PFAM: protein of unknown function DUF204; SPTR: uncharacterized protein; PFAM: Domain of unknown function DUF; hypothetical protein complement(1247298..1247843) Calditerrivibrio nitroreducens DSM 19672 10009207 YP_004051258.1 CDS Calni_1187 NC_014758.1 1247843 1249411 R COGs: COG2985 permease; InterPro IPR006512: IPR006037; KEGG: sdl:Sdel_0018 YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein; SPTR: YidE/YbjL duplication; TIGRFAM: YidE/YbjL duplication; PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain; yide/ybjl duplication complement(1247843..1249411) Calditerrivibrio nitroreducens DSM 19672 10009208 YP_004051259.1 CDS Calni_1188 NC_014758.1 1249435 1250256 R COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304: IPR004455; KEGG: ddf:DEFDS_1283 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase complement(1249435..1250256) Calditerrivibrio nitroreducens DSM 19672 10009209 YP_004051260.1 CDS Calni_1189 NC_014758.1 1250243 1251178 R COGs: COG1647 Esterase/lipase; KEGG: ddf:DEFDS_1284 hypothetical protein; SPTR: uncharacterized protein; PFAM: Prolyl oligopeptidase family; hypothetical protein complement(1250243..1251178) Calditerrivibrio nitroreducens DSM 19672 10009210 YP_004051261.1 CDS Calni_1190 NC_014758.1 1251179 1251607 R COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR000835: IPR001367; KEGG: ddf:DEFDS_1285 MntR family transcriptional regulator; PFAM: iron dependent repressor; SMART: iron dependent repressor; regulatory protein MarR; SPTR: Transcriptional regulator, MntR family; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; iron (metal) dependent repressor, dtxr family complement(1251179..1251607) Calditerrivibrio nitroreducens DSM 19672 10009211 YP_004051262.1 CDS Calni_1191 NC_014758.1 1251648 1252619 R COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: ddf:DEFDS_1404 ribonuclease Z; SPTR: Ribonuclease Z; ribonuclease z complement(1251648..1252619) Calditerrivibrio nitroreducens DSM 19672 10009212 YP_004051263.1 CDS Calni_1192 NC_014758.1 1252609 1254156 R COGs: COG2187 conserved hypothetical protein; KEGG: ddf:DEFDS_1405 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1252609..1254156) Calditerrivibrio nitroreducens DSM 19672 10009213 YP_004051264.1 CDS Calni_1193 NC_014758.1 1254313 1254639 R KEGG: pyo:PY02098 hypothetical protein; SPTR: RNA polymerase ECF-type sigma factor; hypothetical protein complement(1254313..1254639) Calditerrivibrio nitroreducens DSM 19672 10009214 YP_004051265.1 CDS Calni_1194 NC_014758.1 1254658 1254834 R SPTR: uncharacterized protein; hypothetical protein complement(1254658..1254834) Calditerrivibrio nitroreducens DSM 19672 10009215 YP_004051266.1 CDS Calni_1195 NC_014758.1 1254849 1255184 R KEGG: dap:Dacet_1451 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1254849..1255184) Calditerrivibrio nitroreducens DSM 19672 10009216 YP_004051267.1 CDS Calni_1196 NC_014758.1 1255188 1255622 R COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: dap:Dacet_1452 flagellar protein FliS; PFAM: flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar protein flis complement(1255188..1255622) Calditerrivibrio nitroreducens DSM 19672 10009217 YP_004051268.1 CDS Calni_1197 NC_014758.1 1255635 1258232 R COGs: COG1345 Flagellar capping protein; InterPro IPR003481: IPR010810: IPR010809; KEGG: ddf:DEFDS_0581 flagellar hook-associated protein 2; PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; flagellin hook IN repeat protein; SPTR: Flagellar hook-associated protein 2; PFAM: Flagellar hook-associated protein 2 C-terminus; flagellar hook-associated 2 domain-containing protein complement(1255635..1258232) Calditerrivibrio nitroreducens DSM 19672 10009218 YP_004051269.1 CDS Calni_1198 NC_014758.1 1258322 1258945 D COGs: COG0546 phosphatase; InterPro IPR006439: IPR005833: IPR005834; KEGG: ddf:DEFDS_1369 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase 1258322..1258945 Calditerrivibrio nitroreducens DSM 19672 10009219 YP_004051270.1 CDS Calni_1199 NC_014758.1 1258942 1259664 D COGs: COG3884 Acyl-ACP thioesterase; InterPro IPR002864; KEGG: ddf:DEFDS_0026 acyl-acyl carrier protein thioesterase; PFAM: acyl-ACP thioesterase; SPTR: Acyl-acyl carrier protein thioesterase; PFAM: Acyl-ACP thioesterase; acyl-acp thioesterase 1258942..1259664 Calditerrivibrio nitroreducens DSM 19672 10009220 YP_004051271.1 CDS Calni_1200 NC_014758.1 1259656 1260441 R COGs: COG0796 Glutamate racemase; InterPro IPR004391: IPR015942: IPR018187; KEGG: saf:SULAZ_1452 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; glutamate racemase complement(1259656..1260441) Calditerrivibrio nitroreducens DSM 19672 10009221 YP_004051272.1 CDS Calni_1201 NC_014758.1 1260518 1261477 R KEGG: ddf:DEFDS_0864 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1260518..1261477) Calditerrivibrio nitroreducens DSM 19672 10009222 YP_004051273.1 CDS Calni_1202 NC_014758.1 1261474 1262109 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: pmx:PERMA_1157 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(1261474..1262109) Calditerrivibrio nitroreducens DSM 19672 10009223 YP_004051274.1 CDS Calni_1203 NC_014758.1 1262106 1262732 R COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: ddf:DEFDS_1420 metallo-beta-lactamase family protein; SPTR: Metallo-beta-lactamase family protein; PFAM: Metallo-beta-lactamase superfamily; metallo-beta-lactamase family protein complement(1262106..1262732) Calditerrivibrio nitroreducens DSM 19672 10009224 YP_004051275.1 CDS Calni_1204 NC_014758.1 1262743 1263186 R COGs: COG1490 D-Tyr-tRNAtyr deacylase; InterPro IPR003732; KEGG: ddf:DEFDS_1421 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; d-tyrosyl-tRNA(tyr) deacylase complement(1262743..1263186) Calditerrivibrio nitroreducens DSM 19672 10009225 YP_004051276.1 CDS Calni_1205 NC_014758.1 1263183 1264667 R COGs: COG0728 membrane protein virulence factor; InterPro IPR004268; KEGG: dap:Dacet_1448 integral membrane protein MviN; PFAM: virulence factor MVIN family protein; SPTR: Integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein mvin complement(1263183..1264667) Calditerrivibrio nitroreducens DSM 19672 10009226 YP_004051277.1 CDS Calni_1206 NC_014758.1 1264664 1266211 R COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616: IPR008532; KEGG: ddf:DEFDS_0624 fibronectin/fibrinogen-binding protein; PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; SPTR: Fibronectin/fibrinogen-binding protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); hypothetical protein complement(1264664..1266211) Calditerrivibrio nitroreducens DSM 19672 10009227 YP_004051278.1 CDS Calni_1207 NC_014758.1 1266212 1267276 R COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321: IPR003593: IPR001482; KEGG: ddf:DEFDS_0625 twitching motility protein PilT; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Twitching motility protein PilT; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; pilus retraction atpase pilt complement(1266212..1267276) Calditerrivibrio nitroreducens DSM 19672 10009228 YP_004051279.1 CDS Calni_1208 NC_014758.1 1267287 1268096 R InterPro IPR007831; KEGG: ddf:DEFDS_0626 hypothetical protein; PFAM: General secretory system II protein E domain protein; SPTR: uncharacterized protein; PFAM: GSPII_E N-terminal domain; general secretory system ii protein e domain-containing protein complement(1267287..1268096) Calditerrivibrio nitroreducens DSM 19672 10009229 YP_004051280.1 CDS Calni_1209 NC_014758.1 1268089 1269081 R KEGG: ddf:DEFDS_0627 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1268089..1269081) Calditerrivibrio nitroreducens DSM 19672 10009230 YP_004051281.1 CDS Calni_1210 NC_014758.1 1269082 1269762 R COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR013520: IPR006054: IPR006055; KEGG: dap:Dacet_1757 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III subunit epsilon complement(1269082..1269762) Calditerrivibrio nitroreducens DSM 19672 10009231 YP_004051282.1 CDS Calni_1211 NC_014758.1 1269895 1270740 R KEGG: tye:THEYE_A1898 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF400; hypothetical protein complement(1269895..1270740) Calditerrivibrio nitroreducens DSM 19672 10009232 YP_004051283.1 CDS Calni_1212 NC_014758.1 1270948 1273233 R COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR002625: IPR000432: IPR005747: IPR007696; KEGG: ddf:DEFDS_1585 DNA mismatch repair protein MutS2; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2; SPTR: DNA mismatch repair protein MutS2; PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; DNA mismatch repair protein MutS domain-containing protein complement(1270948..1273233) Calditerrivibrio nitroreducens DSM 19672 10009234 YP_004051284.1 CDS Calni_1213 NC_014758.1 1273230 1273760 R InterPro IPR003825; KEGG: ddf:DEFDS_1584 colicin V production protein; PFAM: Colicin V production protein; SPTR: Colicin V production protein; PFAM: Colicin V production protein; colicin v production protein complement(1273230..1273760) Calditerrivibrio nitroreducens DSM 19672 10009235 YP_004051285.1 CDS Calni_1214 NC_014758.1 1273776 1274228 R COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: ddf:DEFDS_1583 hypothetical protein; SPTR: uncharacterized protein; PFAM: Yqey-like protein; hypothetical protein complement(1273776..1274228) Calditerrivibrio nitroreducens DSM 19672 10009236 YP_004051286.1 CDS Calni_1215 NC_014758.1 1274203 1274739 R COGs: COG2096 conserved hypothetical protein; InterPro IPR002779: IPR017858; KEGG: dap:Dacet_1154 ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; ATP/cobalamin adenosyltransferase complement(1274203..1274739) Calditerrivibrio nitroreducens DSM 19672 10009237 YP_004051287.1 CDS Calni_1216 NC_014758.1 1274743 1275705 R COGs: COG0205 6-phosphofructokinase; InterPro IPR015912: IPR000023: IPR012003: IPR012828; KEGG: ddf:DEFDS_0940 6-phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase complement(1274743..1275705) Calditerrivibrio nitroreducens DSM 19672 10009238 YP_004051288.1 CDS Calni_1217 NC_014758.1 1275716 1276381 R COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR018317: IPR004479; KEGG: ddf:DEFDS_0939 ExsB family transcriptional regulator; PFAM: Queuosine synthesis-like; SPTR: Transcriptional regulator, ExsB family; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein; exsb protein complement(1275716..1276381) Calditerrivibrio nitroreducens DSM 19672 10009239 YP_004051289.1 CDS Calni_1218 NC_014758.1 1276391 1277842 R COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445: IPR004772; KEGG: ddf:DEFDS_1538 K+ transport (Trk) system membrane component; PFAM: cation transporter; SPTR: K+ transport (Trk) system, membrane component; TIGRFAM: potassium uptake protein, TrkH family; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; potassium uptake protein, trkh family complement(1276391..1277842) Calditerrivibrio nitroreducens DSM 19672 10009240 YP_004051290.1 CDS Calni_1219 NC_014758.1 1277845 1279200 R COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037: IPR006036; KEGG: dap:Dacet_2986 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain; TrkA domain-containing protein complement(1277845..1279200) Calditerrivibrio nitroreducens DSM 19672 10009241 YP_004051291.1 CDS Calni_1220 NC_014758.1 1279367 1279879 D InterPro IPR018247: IPR003772; KEGG: ddf:DEFDS_0147 hypothetical protein; PFAM: protein of unknown function DUF177; SPTR: uncharacterized protein; PFAM: Uncharacterized ACR, COG1399; hypothetical protein 1279367..1279879 Calditerrivibrio nitroreducens DSM 19672 10009242 YP_004051292.1 CDS Calni_1221 NC_014758.1 1279882 1280064 D InterPro IPR002677; KEGG: dap:Dacet_3007 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 1279882..1280064 Calditerrivibrio nitroreducens DSM 19672 10009243 YP_004051293.1 CDS Calni_1222 NC_014758.1 1280065 1281147 D COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR003664: IPR012281; KEGG: ddf:DEFDS_0149 fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; SPTR: Phosphate acyltransferase; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; phosphate:acyl-(acyl carrier protein) acyltransferase 1280065..1281147 Calditerrivibrio nitroreducens DSM 19672 10009244 YP_004051294.1 CDS Calni_1223 NC_014758.1 1281155 1282132 D COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751: IPR013747: IPR004655; KEGG: ddf:DEFDS_0150 3-oxoacyl-[acyl-carrier-protein] synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase iii 1281155..1282132 Calditerrivibrio nitroreducens DSM 19672 10009245 YP_004051295.1 CDS Calni_1224 NC_014758.1 1282147 1283079 D COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043: IPR004410; KEGG: ddf:DEFDS_0151 [acyl-carrier-protein] S-malonyltransferase; PFAM: Acyl transferase; SPTR: [acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; (acyl-carrier-protein) s-malonyltransferase 1282147..1283079 Calditerrivibrio nitroreducens DSM 19672 10009246 YP_004051296.1 CDS Calni_1225 NC_014758.1 1283072 1283815 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198: IPR011284; KEGG: ddf:DEFDS_0152 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-[acyl-carrier-protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1283072..1283815 Calditerrivibrio nitroreducens DSM 19672 10009247 YP_004051297.1 CDS Calni_1226 NC_014758.1 1283849 1284085 D COGs: COG0236 Acyl carrier protein; InterPro IPR009081: IPR006162: IPR006163: IPR003231; KEGG: glo:Glov_1935 acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 1283849..1284085 Calditerrivibrio nitroreducens DSM 19672 10009248 YP_004051298.1 CDS Calni_1227 NC_014758.1 1284178 1285419 D COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017441: IPR018201: IPR014030: IPR014031: IPR 017568; KEGG: ddf:DEFDS_0154 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase ii 1284178..1285419 Calditerrivibrio nitroreducens DSM 19672 10009249 YP_004051299.1 CDS Calni_1228 NC_014758.1 1285409 1286098 D COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR001159: IPR000999: IPR011907; KEGG: ddf:DEFDS_0155 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: Ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: Ribonuclease III; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; rnase iii 1285409..1286098 Calditerrivibrio nitroreducens DSM 19672 10009250 YP_004051300.1 CDS Calni_1229 NC_014758.1 1286102 1287103 D COGs: COG1243 Histone acetyltransferase; InterPro IPR007197: IPR006638; KEGG: ddf:DEFDS_0156 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein 1286102..1287103 Calditerrivibrio nitroreducens DSM 19672 10009251 YP_004051301.1 CDS Calni_1230 NC_014758.1 1287045 1287551 D COGs: COG0742 N6-adenine-specific methylase; InterPro IPR002052: IPR004398; KEGG: ddf:DEFDS_0157 DNA methylase; PFAM: Conserved hypothetical protein CHP00095; SPTR: DNA methylase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; methyltransferase 1287045..1287551 Calditerrivibrio nitroreducens DSM 19672 10009252 YP_004051302.1 CDS Calni_1231 NC_014758.1 1287573 1288835 R COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: bth:BT_0629 Mn2+ and Fe2+ transport protein; PFAM: natural resistance-associated macrophage protein; SPTR: uncharacterized protein; PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters; natural resistance-associated macrophage protein complement(1287573..1288835) Calditerrivibrio nitroreducens DSM 19672 10009253 YP_004051303.1 CDS Calni_1232 NC_014758.1 1288840 1289418 R COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterPro IPR013849: IPR000445: IPR011114: IPR000085; KEGG: ddf:DEFDS_1659 Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; helix-hairpin-helix motif; RuvA domain protein; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; holliday junction DNA helicase ruva complement(1288840..1289418) Calditerrivibrio nitroreducens DSM 19672 10009254 YP_004051304.1 CDS Calni_1233 NC_014758.1 1289422 1289916 R COGs: COG0817 Holliday junction resolvasome endonuclease subunit; InterPro IPR020563: IPR002176; KEGG: dap:Dacet_0474 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease ruvc complement(1289422..1289916) Calditerrivibrio nitroreducens DSM 19672 10009255 YP_004051305.1 CDS Calni_1234 NC_014758.1 1289921 1290649 R COGs: COG0217 conserved hypothetical protein; InterPro IPR001969: IPR002876; KEGG: ddf:DEFDS_1661 hypothetical protein; PFAM: protein of unknown function DUF28; SPTR: UPF0082 protein DEFDS_1661; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; hypothetical protein complement(1289921..1290649) Calditerrivibrio nitroreducens DSM 19672 10009256 YP_004051306.1 CDS Calni_1235 NC_014758.1 1290784 1291281 D COGs: COG1666 conserved hypothetical protein; InterPro IPR007551; KEGG: tjr:TherJR_1429 protein of unknown function DUF520; PFAM: protein of unknown function DUF520; SPTR: UPF0234 protein LW3_0090; PFAM: Protein of unknown function (DUF520); hypothetical protein 1290784..1291281 Calditerrivibrio nitroreducens DSM 19672 10009257 YP_004051307.1 CDS Calni_1236 NC_014758.1 1291291 1291653 D InterPro IPR013096; KEGG: ddf:DEFDS_2012 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: uncharacterized protein; PFAM: Cupin domain; cupin 2 barrel domain-containing protein 1291291..1291653 Calditerrivibrio nitroreducens DSM 19672 10009258 YP_004051308.1 CDS Calni_1237 NC_014758.1 1291654 1292067 D COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: ddf:DEFDS_0089 nucleoside-diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase 1291654..1292067 Calditerrivibrio nitroreducens DSM 19672 10009259 YP_004051309.1 CDS Calni_1238 NC_014758.1 1292125 1293519 D COGs: COG0498 Threonine synthase; InterPro IPR001926: IPR004450; KEGG: ddf:DEFDS_0090 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; l-threonine synthase 1292125..1293519 Calditerrivibrio nitroreducens DSM 19672 10009260 YP_004051310.1 CDS Calni_1239 NC_014758.1 1293520 1294539 D COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: ddf:DEFDS_0091 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; s-adenosylmethionine--tRNA ribosyltransferase-isomerase 1293520..1294539 Calditerrivibrio nitroreducens DSM 19672 10009261 YP_004051311.1 CDS Calni_1240 NC_014758.1 1294552 1295673 D COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR002616: IPR004803; KEGG: ddf:DEFDS_0092 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; manually curated; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase 1294552..1295673 Calditerrivibrio nitroreducens DSM 19672 10009262 YP_004051312.1 CDS Calni_1241 NC_014758.1 1295666 1295992 D COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: ddf:DEFDS_0093 preprotein translocase subunit YajC; PFAM: YajC family protein; SPTR: Preprotein translocase subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; protein translocase subunit yajc 1295666..1295992 Calditerrivibrio nitroreducens DSM 19672 10009263 YP_004051313.1 CDS Calni_1242 NC_014758.1 1296009 1297562 D COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR001036: IPR003335: IPR005791; KEGG: ddf:DEFDS_0094 preprotein translocase subunit D; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Preprotein translocase subunit D; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein secd 1296009..1297562 Calditerrivibrio nitroreducens DSM 19672 10009264 YP_004051314.1 CDS Calni_1243 NC_014758.1 1297573 1298487 D COGs: COG0341 Preprotein translocase subunit SecF; InterPro IPR003335: IPR005665; KEGG: ddf:DEFDS_0095 preprotein translocase subunit F; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Preprotein translocase subunit F; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein translocase subunit secf 1297573..1298487 Calditerrivibrio nitroreducens DSM 19672 10009265 YP_004051315.1 CDS Calni_1244 NC_014758.1 1298519 1299139 R COGs: COG4786 Flagellar basal body rod protein; InterPro IPR019776: IPR010930: IPR020013; KEGG: ddf:DEFDS_1676 flagellar basal-body rod protein; PFAM: protein of unknown function DUF1078 domain protein; SPTR: Flagellar basal-body rod protein; TIGRFAM: fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; fagellar hook-basal body protein complement(1298519..1299139) Calditerrivibrio nitroreducens DSM 19672 10009266 YP_004051316.1 CDS Calni_1245 NC_014758.1 1299220 1299972 D KEGG: tal:Thal_1067 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF3108); hypothetical protein 1299220..1299972 Calditerrivibrio nitroreducens DSM 19672 10009267 YP_004051317.1 CDS Calni_1246 NC_014758.1 1300441 1301091 D COGs: COG1584 membrane protein; InterPro IPR000791; KEGG: ddf:DEFDS_0518 hypothetical protein; PFAM: GPR1/FUN34/yaaH family protein; SPTR: uncharacterized protein; PFAM: GPR1/FUN34/yaaH family; gpr1/fun34/yaah family protein 1300441..1301091 Calditerrivibrio nitroreducens DSM 19672 10009268 YP_004051318.1 CDS Calni_1247 NC_014758.1 1301215 1302291 D COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR019818: IPR001804: IPR004429; KEGG: ddf:DEFDS_0681 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 1301215..1302291 Calditerrivibrio nitroreducens DSM 19672 10009269 YP_004051319.1 CDS Calni_1248 NC_014758.1 1302388 1304310 R InterPro IPR011031; KEGG: dap:Dacet_0428 cytochrome c family protein; SPTR: Cytochrome c family protein; cytochrome c family protein complement(1302388..1304310) Calditerrivibrio nitroreducens DSM 19672 10009270 YP_004051320.1 CDS Calni_1249 NC_014758.1 1304451 1305746 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR020441: IPR002197: IPR 003593; KEGG: dap:Dacet_0429 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator complement(1304451..1305746) Calditerrivibrio nitroreducens DSM 19672 10009271 YP_004051321.1 CDS Calni_1250 NC_014758.1 1305727 1307577 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467: IPR003660: IPR004358: IPR003661: IPR 003594; KEGG: dap:Dacet_0430 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(1305727..1307577) Calditerrivibrio nitroreducens DSM 19672 10009272 YP_004051322.1 CDS Calni_1251 NC_014758.1 1307764 1308594 D COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: ddf:DEFDS_1437 Sir2 family transcriptional regulator; PFAM: Silent information regulator protein Sir2; SPTR: Transcriptional regulator, Sir2 family; PFAM: Sir2 family; silent information regulator protein sir2 1307764..1308594 Calditerrivibrio nitroreducens DSM 19672 10009273 YP_004051323.1 CDS Calni_1252 NC_014758.1 1308596 1309897 D KEGG: ddf:DEFDS_1440 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1308596..1309897 Calditerrivibrio nitroreducens DSM 19672 10009274 YP_004051324.1 CDS Calni_1253 NC_014758.1 1309959 1310423 R COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR016192: IPR002125; KEGG: ddf:DEFDS_1370 CMP/dCMP deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: CMP/dCMP deaminase, zinc-binding protein; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cmp/dcmp deaminase zinc-binding protein complement(1309959..1310423) Calditerrivibrio nitroreducens DSM 19672 10009275 YP_004051325.1 CDS Calni_1254 NC_014758.1 1310425 1311126 R COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: dap:Dacet_1187 hypothetical protein; PFAM: protein of unknown function DUF558; SPTR: uncharacterized protein; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; hypothetical protein complement(1310425..1311126) Calditerrivibrio nitroreducens DSM 19672 10009276 YP_004051326.1 CDS Calni_1255 NC_014758.1 1311119 1311904 R COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456; KEGG: dap:Dacet_1185 ribosomal L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; SPTR: Ribosomal L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; ribosomal l11 methyltransferase complement(1311119..1311904) Calditerrivibrio nitroreducens DSM 19672 10009277 YP_004051327.1 CDS Calni_1256 NC_014758.1 1311906 1312376 R COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537: IPR016914; KEGG: ddf:DEFDS_1378 rRNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: rRNA methylase; PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; tRNA/rRNA methyltransferase (spou) complement(1311906..1312376) Calditerrivibrio nitroreducens DSM 19672 10009278 YP_004051328.1 CDS Calni_1257 NC_014758.1 1312376 1312711 R COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: dap:Dacet_1885 iojap-like protein; PFAM: Iojap-related protein; SPTR: Iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; iojap family protein complement(1312376..1312711) Calditerrivibrio nitroreducens DSM 19672 10009279 YP_004051329.1 CDS Calni_1258 NC_014758.1 1312711 1313352 R COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR004820: IPR005248: IPR004821; KEGG: ddf:DEFDS_1381 nicotinate-nucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; Cytidylyltransferase C-terminal domain (DUF2432); TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(1312711..1313352) Calditerrivibrio nitroreducens DSM 19672 10009280 YP_004051330.1 CDS Calni_1259 NC_014758.1 1313354 1314583 R COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR020593: IPR012134: IPR000965; KEGG: ddf:DEFDS_1382 glutamate-5-semialdehyde dehydrogenase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase complement(1313354..1314583) Calditerrivibrio nitroreducens DSM 19672 10009281 YP_004051331.1 CDS Calni_1260 NC_014758.1 1314584 1315723 R COGs: COG0263 Glutamate 5-kinase; InterPro IPR002478: IPR019797: IPR001057: IPR001048: IPR 011529: IPR005715; KEGG: ddf:DEFDS_1383 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein; SPTR: Glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase complement(1314584..1315723) Calditerrivibrio nitroreducens DSM 19672 10009282 YP_004051332.1 CDS Calni_1261 NC_014758.1 1315823 1316584 R COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: rsk:RSKD131_3843 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; polysaccharide deacetylase complement(1315823..1316584) Calditerrivibrio nitroreducens DSM 19672 10009283 YP_004051333.1 CDS Calni_1262 NC_014758.1 1316594 1317649 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rsk:RSKD131_3842 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1316594..1317649) Calditerrivibrio nitroreducens DSM 19672 10009284 YP_004051334.1 CDS Calni_1263 NC_014758.1 1317733 1318449 R COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR017896: IPR017900: IPR004489; KEGG: ddf:DEFDS_0685 succinate dehydrogenase iron-sulfur protein; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: Succinate dehydrogenase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase subunit b complement(1317733..1318449) Calditerrivibrio nitroreducens DSM 19672 10009285 YP_004051335.1 CDS Calni_1264 NC_014758.1 1318464 1320233 R COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003952: IPR003953: IPR004112: IPR011281: IPR 014006; KEGG: ddf:DEFDS_0686 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; succinate dehydrogenase subunit a complement(1318464..1320233) Calditerrivibrio nitroreducens DSM 19672 10009286 YP_004051336.1 CDS Calni_1265 NC_014758.1 1320256 1320576 R KEGG: ddf:DEFDS_0687 succinate dehydrogenase hydrophobic membrane anchor protein; SPTR: Succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase hydrophobic membrane anchor protein complement(1320256..1320576) Calditerrivibrio nitroreducens DSM 19672 10009287 YP_004051337.1 CDS Calni_1266 NC_014758.1 1320589 1320942 R InterPro IPR000701: IPR014314; KEGG: ddf:DEFDS_0688 succinate dehydrogenase cytochrome b subunit; PFAM: succinate dehydrogenase cytochrome b subunit; SPTR: Succinate dehydrogenase, cytochrome b subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase subunit c complement(1320589..1320942) Calditerrivibrio nitroreducens DSM 19672 10009288 YP_004051338.1 CDS Calni_1267 NC_014758.1 1321156 1321554 R InterPro IPR004917; KEGG: ttu:TERTU_1314 A-type flagellin; SPTR: A-type flagellin; hypothetical protein complement(1321156..1321554) Calditerrivibrio nitroreducens DSM 19672 10009289 YP_004051339.1 CDS Calni_1268 NC_014758.1 1321642 1321884 R KEGG: ddf:DEFDS_2024 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1321642..1321884) Calditerrivibrio nitroreducens DSM 19672 10009290 YP_004051340.1 CDS Calni_1269 NC_014758.1 1321939 1324308 R InterPro IPR019734: IPR001623: IPR013026; KEGG: ddf:DEFDS_1498 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; Tetratricopeptide repeat; SPTR: uncharacterized protein; PFAM: DnaJ domain; heat shock protein dnaj domain-containing protein complement(1321939..1324308) Calditerrivibrio nitroreducens DSM 19672 10009291 YP_004051341.1 CDS Calni_1270 NC_014758.1 1324301 1325065 R COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR020583: IPR020550: IPR000760; KEGG: ddf:DEFDS_1499 inositol-phosphate phosphatase; PFAM: inositol monophosphatase; SPTR: Inositol-phosphate phosphatase; PFAM: Inositol monophosphatase family; inositol monophosphatase complement(1324301..1325065) Calditerrivibrio nitroreducens DSM 19672 10009292 YP_004051342.1 CDS Calni_1271 NC_014758.1 1325115 1326152 R COGs: COG1485 ATPase; InterPro IPR005654; KEGG: ddf:DEFDS_1500 hypothetical protein; PFAM: AFG1-family ATPase; SPTR: uncharacterized protein; PFAM: AFG1-like ATPase; afg1-family atpase complement(1325115..1326152) Calditerrivibrio nitroreducens DSM 19672 10009293 YP_004051343.1 CDS Calni_1272 NC_014758.1 1326296 1327621 R COGs: COG0372 Citrate synthase; InterPro IPR019810: IPR002020; KEGG: gsu:GSU1106 type I citrate synthase; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: Citrate synthase; PFAM: Citrate synthase; TIGRFAM: citrate (Si)-synthase, eukaryotic; citrate synthase complement(1326296..1327621) Calditerrivibrio nitroreducens DSM 19672 10009294 YP_004051344.1 CDS Calni_1273 NC_014758.1 1327907 1328746 D InterPro IPR000620; KEGG: dap:Dacet_1801 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 1327907..1328746 Calditerrivibrio nitroreducens DSM 19672 10009295 YP_004051345.1 CDS Calni_1274 NC_014758.1 1328890 1329549 D COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ddf:DEFDS_2076 enoyl-CoA hydratase/isomerase family protein; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase family protein; PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/isomerase 1328890..1329549 Calditerrivibrio nitroreducens DSM 19672 10009296 YP_004051346.1 CDS Calni_1275 NC_014758.1 1329549 1331924 D COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR019760: IPR002298: IPR020046: IPR020047: IPR 001098: IPR018320: IPR002421: IPR008918; KEGG: ddf:DEFDS_1967 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase i 1329549..1331924 Calditerrivibrio nitroreducens DSM 19672 10009297 YP_004051347.1 CDS Calni_1276 NC_014758.1 1331924 1332961 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ddf:DEFDS_1966 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1331924..1332961 Calditerrivibrio nitroreducens DSM 19672 10009298 YP_004051348.1 CDS Calni_1277 NC_014758.1 1332958 1334217 D COGs: COG0141 Histidinol dehydrogenase; InterPro IPR001692: IPR012131; KEGG: ddf:DEFDS_1965 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase 1332958..1334217 Calditerrivibrio nitroreducens DSM 19672 10009299 YP_004051349.1 CDS Calni_1278 NC_014758.1 1334221 1334862 D COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: ddf:DEFDS_2125 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-5-phosphate 3-epimerase 1334221..1334862 Calditerrivibrio nitroreducens DSM 19672 10009300 YP_004051350.1 CDS Calni_1279 NC_014758.1 1334863 1336188 D COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: ddf:DEFDS_0972 tRNA/rRNA cytosine-C5-methylase NOL1/NOP2/Sun family; PFAM: Fmu (Sun) domain protein; SPTR: tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family; PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family RNA methylase; fmu (sun) domain-containing protein 1334863..1336188 Calditerrivibrio nitroreducens DSM 19672 10009301 YP_004051351.1 CDS Calni_1280 NC_014758.1 1336188 1337474 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789: IPR000160; KEGG: ddf:DEFDS_0973 signal transduction response regulator; PFAM: GGDEF domain containing protein; response regulator receiver; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; response regulator receiver; SPTR: Signal transduction response regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase 1336188..1337474 Calditerrivibrio nitroreducens DSM 19672 10009302 YP_004051352.1 CDS Calni_1281 NC_014758.1 1337467 1338882 D COGs: COG3034 conserved hypothetical protein; InterPro IPR005490; KEGG: ddf:DEFDS_0974 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: uncharacterized protein; manually curated; PFAM: L,D-transpeptidase catalytic domain; erfk/ybis/ycfs/ynhg family protein 1337467..1338882 Calditerrivibrio nitroreducens DSM 19672 10009303 YP_004051353.1 CDS Calni_1282 NC_014758.1 1338879 1340297 D KEGG: ddf:DEFDS_0975 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1338879..1340297 Calditerrivibrio nitroreducens DSM 19672 10009304 YP_004051354.1 CDS Calni_1283 NC_014758.1 1340346 1341404 D COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: ddf:DEFDS_0976 hypothetical protein; PFAM: basic membrane lipoprotein; SPTR: uncharacterized protein; PFAM: Basic membrane protein; nucleoside-binding protein 1340346..1341404 Calditerrivibrio nitroreducens DSM 19672 10009305 YP_004051355.1 CDS Calni_1284 NC_014758.1 1341441 1342949 D COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: ddf:DEFDS_0977 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter; nucleoside ABC transporter ATP-binding protein 1341441..1342949 Calditerrivibrio nitroreducens DSM 19672 10009306 YP_004051356.1 CDS Calni_1285 NC_014758.1 1342942 1344006 D COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: ddf:DEFDS_0978 sugar ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Sugar ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1342942..1344006 Calditerrivibrio nitroreducens DSM 19672 10009307 YP_004051357.1 CDS Calni_1286 NC_014758.1 1343999 1344910 D COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: dap:Dacet_2150 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component; nucleoside ABC transporter membrane protein 1343999..1344910 Calditerrivibrio nitroreducens DSM 19672 10009308 YP_004051358.1 CDS Calni_1287 NC_014758.1 1344907 1345452 D COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836; KEGG: ddf:DEFDS_0980 xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Xanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: xanthine phosphoribosyltransferase; phosphoribosyltransferase 1344907..1345452 Calditerrivibrio nitroreducens DSM 19672 10009309 YP_004051359.1 CDS Calni_1288 NC_014758.1 1345442 1346944 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467: IPR003660: IPR004358: IPR003661: IPR 003594; KEGG: ddf:DEFDS_0982 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: uncharacterized protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 1345442..1346944 Calditerrivibrio nitroreducens DSM 19672 10009310 YP_004051360.1 CDS Calni_1289 NC_014758.1 1346931 1347659 D COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR020904: IPR001173; KEGG: ddf:DEFDS_0983 dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Dolichol-phosphate mannosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1346931..1347659 Calditerrivibrio nitroreducens DSM 19672 10009311 YP_004051361.1 CDS Calni_1290 NC_014758.1 1347649 1347930 D COGs: COG3952 membrane protein; InterPro IPR011499; KEGG: ddf:DEFDS_0984 lipid A biosynthesis domain protein; PFAM: lipid A biosynthesis domain protein; SPTR: Lipid A biosynthesis domain protein; PFAM: Lipid A Biosynthesis N-terminal domain; lipid a biosynthesis domain-containing protein 1347649..1347930 Calditerrivibrio nitroreducens DSM 19672 10009312 YP_004051362.1 CDS Calni_1291 NC_014758.1 1347917 1349509 D COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: ddf:DEFDS_0985 hypothetical protein; PFAM: glycosyl transferase family 39; SPTR: uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; glycosyl transferase family protein 1347917..1349509 Calditerrivibrio nitroreducens DSM 19672 10009313 YP_004051363.1 CDS Calni_1292 NC_014758.1 1349494 1350123 D InterPro IPR000326; KEGG: cli:Clim_0637 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Pap2 superfamily protein; PFAM: PAP2 superfamily; phosphoesterase pa-phosphatase-like protein 1349494..1350123 Calditerrivibrio nitroreducens DSM 19672 10009314 YP_004051364.1 CDS Calni_1293 NC_014758.1 1350101 1351687 D COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: dsa:Desal_2867 glycosyl transferase family 39; PFAM: glycosyl transferase family 39; SPTR: Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; glycosyl transferase family protein 1350101..1351687 Calditerrivibrio nitroreducens DSM 19672 10009315 YP_004051365.1 CDS Calni_1294 NC_014758.1 1351684 1352271 R KEGG: ddf:DEFDS_0653 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1351684..1352271) Calditerrivibrio nitroreducens DSM 19672 10009316 YP_004051366.1 CDS Calni_1295 NC_014758.1 1352442 1354562 R COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterPro IPR004088: IPR003029: IPR000358: IPR001247: IPR 015847: IPR015848: IPR018111: IPR012162: IPR004087; KEGG: ddf:DEFDS_1520 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase complement(1352442..1354562) Calditerrivibrio nitroreducens DSM 19672 10009317 YP_004051367.1 CDS Calni_1296 NC_014758.1 1354565 1354834 R COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589: IPR005290; KEGG: ddf:DEFDS_1521 30S ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 complement(1354565..1354834) Calditerrivibrio nitroreducens DSM 19672 10009318 YP_004051368.1 CDS Calni_1297 NC_014758.1 1354903 1355808 R COGs: COG0130 Pseudouridine synthase; InterPro IPR002501: IPR014780; KEGG: ddf:DEFDS_1522 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase b complement(1354903..1355808) Calditerrivibrio nitroreducens DSM 19672 10009319 YP_004051369.1 CDS Calni_1298 NC_014758.1 1355808 1356158 R COGs: COG0858 Ribosome-binding factor A; InterPro IPR000238; KEGG: ddf:DEFDS_1523 ribosome-binding factor A; PFAM: ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor a complement(1355808..1356158) Calditerrivibrio nitroreducens DSM 19672 10009320 YP_004051370.1 CDS Calni_1299 NC_014758.1 1356158 1356439 R COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: ddf:DEFDS_1524 hypothetical protein; PFAM: protein of unknown function DUF503; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF503); hypothetical protein complement(1356158..1356439) Calditerrivibrio nitroreducens DSM 19672 10009321 YP_004051371.1 CDS Calni_1300 NC_014758.1 1356439 1359570 R COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterPro IPR006847: IPR000795: IPR004161: IPR000178: IPR 005225; KEGG: ddf:DEFDS_1525 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; SPTR: Translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor if-2 complement(1356439..1359570) Calditerrivibrio nitroreducens DSM 19672 10009322 YP_004051372.1 CDS Calni_1301 NC_014758.1 1359644 1360930 R COGs: COG0195 Transcription elongation factor; InterPro IPR004088: IPR003029: IPR013735: IPR018111: IPR 010213: IPR004087; KEGG: ddf:DEFDS_1527 N utilization substance protein A; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; K Homology, type 1, subgroup; SMART: KH domain protein; SPTR: N utilization substance protein A; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; nusa antitermination factor complement(1359644..1360930) Calditerrivibrio nitroreducens DSM 19672 10009323 YP_004051373.1 CDS Calni_1302 NC_014758.1 1360956 1361429 R InterPro IPR003728: IPR020790; KEGG: ddf:DEFDS_1528 hypothetical protein; PFAM: protein of unknown function DUF150; SPTR: Ribosome maturation factor rimP; PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein complement(1360956..1361429) Calditerrivibrio nitroreducens DSM 19672 10009324 YP_004051374.1 CDS Calni_1303 NC_014758.1 1361699 1362454 R COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652: IPR020861; KEGG: ddf:DEFDS_0129 triose-phosphate isomerase; PFAM: triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase complement(1361699..1362454) Calditerrivibrio nitroreducens DSM 19672 10009325 YP_004051375.1 CDS Calni_1304 NC_014758.1 1362451 1362822 R COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: ddf:DEFDS_0128 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: uncharacterized protein; PFAM: Protein of unknown function, DUF583; hypothetical protein complement(1362451..1362822) Calditerrivibrio nitroreducens DSM 19672 10009326 YP_004051376.1 CDS Calni_1305 NC_014758.1 1362816 1363658 R COGs: COG1475 transcriptional regulator protein; InterPro IPR006162: IPR003115: IPR004437; KEGG: dap:Dacet_2976 ParB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; parb-like partition protein complement(1362816..1363658) Calditerrivibrio nitroreducens DSM 19672 10009327 YP_004051377.1 CDS Calni_1306 NC_014758.1 1363655 1364404 R COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: ddf:DEFDS_0126 chromosome partitioning protein ParA; SPTR: Chromosome partitioning protein ParA; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome segregation atpase complement(1363655..1364404) Calditerrivibrio nitroreducens DSM 19672 10009328 YP_004051378.1 CDS Calni_1307 NC_014758.1 1364506 1365318 R COGs: COG0313 methyltransferase; InterPro IPR018063: IPR000878: IPR008189; KEGG: ddf:DEFDS_0501 tetrapyrrole methylase family protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Tetrapyrrole methylase family protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase complement(1364506..1365318) Calditerrivibrio nitroreducens DSM 19672 10009329 YP_004051379.1 CDS Calni_1308 NC_014758.1 1365337 1366302 R COGs: COG0492 Thioredoxin reductase; InterPro IPR008255: IPR000103: IPR013027: IPR005982; KEGG: ddf:DEFDS_0503 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase complement(1365337..1366302) Calditerrivibrio nitroreducens DSM 19672 10009330 YP_004051380.1 CDS Calni_1309 NC_014758.1 1366322 1366588 R KEGG: ddf:DEFDS_0505 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1366322..1366588) Calditerrivibrio nitroreducens DSM 19672 10009331 YP_004051381.1 CDS Calni_1310 NC_014758.1 1366585 1367424 R COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638: IPR004393; KEGG: ddf:DEFDS_0506 nicotinate-nucleotide pyrophosphorylase carboxylating; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Nicotinate-nucleotide pyrophosphorylase, carboxylating; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(1366585..1367424) Calditerrivibrio nitroreducens DSM 19672 10009332 YP_004051382.1 CDS Calni_1311 NC_014758.1 1367424 1370048 R COGs: COG0525 Valyl-tRNA synthetase; InterPro IPR001412: IPR019754: IPR002300: IPR013155: IPR 019499: IPR002303; KEGG: ddf:DEFDS_0507 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: Valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase complement(1367424..1370048) Calditerrivibrio nitroreducens DSM 19672 10009333 YP_004051383.1 CDS Calni_1312 NC_014758.1 1370064 1370315 R KEGG: ddf:DEFDS_0508 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1370064..1370315) Calditerrivibrio nitroreducens DSM 19672 10009334 YP_004051384.1 CDS Calni_1313 NC_014758.1 1370321 1370524 R KEGG: dap:Dacet_1740 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1370321..1370524) Calditerrivibrio nitroreducens DSM 19672 10009335 YP_004051385.1 CDS Calni_1314 NC_014758.1 1370526 1370945 R COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: dap:Dacet_1739 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase; SPTR: uncharacterized protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; hypothetical protein complement(1370526..1370945) Calditerrivibrio nitroreducens DSM 19672 10009336 YP_004051386.1 CDS Calni_1315 NC_014758.1 1370920 1372434 R COGs: COG0063 sugar kinase; InterPro IPR000631: IPR004443; KEGG: ddf:DEFDS_0510 hypothetical protein; PFAM: YjeF-family domain-containing protein; protein of unknown function UPF0031; SPTR: uncharacterized protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region; carbohydrate kinase complement(1370920..1372434) Calditerrivibrio nitroreducens DSM 19672 10009337 YP_004051387.1 CDS Calni_1316 NC_014758.1 1372443 1373432 R COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR002173: IPR011611: IPR011913; KEGG: ddf:DEFDS_0511 ADP-heptose synthase; PFAM: PfkB domain protein; SPTR: ADP-heptose synthase; TIGRFAM: rfaE bifunctional protein; PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(1372443..1373432) Calditerrivibrio nitroreducens DSM 19672 10009338 YP_004051388.1 CDS Calni_1317 NC_014758.1 1373432 1373617 R InterPro IPR005651; KEGG: ddf:DEFDS_0512 hypothetical protein; PFAM: protein of unknown function DUF343; SPTR: uncharacterized protein; PFAM: Trm112p-like protein; hypothetical protein complement(1373432..1373617) Calditerrivibrio nitroreducens DSM 19672 10009339 YP_004051389.1 CDS Calni_1318 NC_014758.1 1373700 1374602 D COGs: COG1242 Fe-S oxidoreductase; InterPro IPR007197: IPR005911: IPR006638; KEGG: ddf:DEFDS_0514 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; hypothetical protein 1373700..1374602 Calditerrivibrio nitroreducens DSM 19672 10009340 YP_004051390.1 CDS Calni_1319 NC_014758.1 1374599 1375990 D COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: ddf:DEFDS_0515 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; SPTR: Cardiolipin synthetase; PFAM: Phospholipase D Active site motif; phospholipase d/transphosphatidylase 1374599..1375990 Calditerrivibrio nitroreducens DSM 19672 10009341 YP_004051391.1 CDS Calni_1320 NC_014758.1 1375999 1376871 R InterPro IPR000620; KEGG: ddf:DEFDS_0955 drug/metabolite transporter DME family; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Drug/metabolite transporter, DME family; PFAM: EamA-like transporter family; hypothetical protein complement(1375999..1376871) Calditerrivibrio nitroreducens DSM 19672 10009342 YP_004051392.1 CDS Calni_1321 NC_014758.1 1376907 1377254 R COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: ddf:DEFDS_1501 50S ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 complement(1376907..1377254) Calditerrivibrio nitroreducens DSM 19672 10009343 YP_004051393.1 CDS Calni_1322 NC_014758.1 1377270 1377467 R COGs: COG0291 Ribosomal protein L35; InterPro IPR018265: IPR001706: IPR021137; KEGG: ddf:DEFDS_1502 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 complement(1377270..1377467) Calditerrivibrio nitroreducens DSM 19672 10009344 YP_004051394.1 CDS Calni_1323 NC_014758.1 1377483 1378010 R COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR019813: IPR019814: IPR019815: IPR001288; KEGG: ddf:DEFDS_1503 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; SPTR: Translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; manually curated; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; bacterial translation initiation factor 3 (bif-3) complement(1377483..1378010) Calditerrivibrio nitroreducens DSM 19672 10009345 YP_004051395.1 CDS Calni_1324 NC_014758.1 1378014 1379936 R COGs: COG0441 Threonyl-tRNA synthetase; InterPro IPR006195: IPR018158: IPR004095: IPR012947: IPR 002314: IPR004154: IPR002320; KEGG: ddf:DEFDS_1504 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; SPTR: Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase complement(1378014..1379936) Calditerrivibrio nitroreducens DSM 19672 10009346 YP_004051396.1 CDS Calni_1325 NC_014758.1 1380107 1380898 D COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ddf:DEFDS_2078 enoyl-CoA hydratase/isomerase family protein; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase family protein; PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/isomerase 1380107..1380898 Calditerrivibrio nitroreducens DSM 19672 10009347 YP_004051397.1 CDS Calni_1326 NC_014758.1 1380882 1382153 D COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sat:SYN_02462 type I secretion outer membrane protein; PFAM: outer membrane efflux protein; SPTR: Type I secretion outer membrane protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein 1380882..1382153 Calditerrivibrio nitroreducens DSM 19672 10009348 YP_004051398.1 CDS Calni_1327 NC_014758.1 1382146 1383255 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: geo:Geob_2771 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter, rnd family, mfp subunit 1382146..1383255 Calditerrivibrio nitroreducens DSM 19672 10009349 YP_004051399.1 CDS Calni_1328 NC_014758.1 1383248 1386325 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: gsu:GSU1611 AcrB/AcrD/AcrF family protein; PFAM: acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; acriflavin resistance protein 1383248..1386325 Calditerrivibrio nitroreducens DSM 19672 10009350 YP_004051400.1 CDS Calni_1329 NC_014758.1 1386406 1386708 D KEGG: clj:CLJU_c09350 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1386406..1386708 Calditerrivibrio nitroreducens DSM 19672 10009351 YP_004051401.1 CDS Calni_1330 NC_014758.1 1386727 1387155 D KEGG: gbm:Gbem_0797 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1386727..1387155 Calditerrivibrio nitroreducens DSM 19672 10009352 YP_004051402.1 CDS Calni_1331 NC_014758.1 1387190 1387462 R COGs: COG1987 Flagellar biosynthesis pathway component FliQ; InterPro IPR002191: IPR006305; KEGG: ddf:DEFDS_1713 flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; SPTR: Flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; flagellar biosynthetic protein fliq complement(1387190..1387462) Calditerrivibrio nitroreducens DSM 19672 10009353 YP_004051403.1 CDS Calni_1332 NC_014758.1 1387470 1388204 R COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838: IPR005837; KEGG: ddf:DEFDS_1714 flagellar transport protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: Flagellar transport protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; flagellar biosynthetic protein flip complement(1387470..1388204) Calditerrivibrio nitroreducens DSM 19672 10009354 YP_004051404.1 CDS Calni_1333 NC_014758.1 1388204 1388971 R KEGG: dap:Dacet_0294 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1388204..1388971) Calditerrivibrio nitroreducens DSM 19672 10009355 YP_004051405.1 CDS Calni_1334 NC_014758.1 1388964 1389248 R COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR001172: IPR001543; KEGG: dap:Dacet_0293 surface presentation of antigens (SpoA) protein; PFAM: surface presentation of antigens (SPOA) protein; SPTR: Surface presentation of antigens (SPOA) protein; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN; surface presentation of antigens (spoa) protein complement(1388964..1389248) Calditerrivibrio nitroreducens DSM 19672 10009356 YP_004051406.1 CDS Calni_1335 NC_014758.1 1389255 1389791 R COGs: COG1580 Flagellar basal body-associated protein; InterPro IPR005503; KEGG: ddf:DEFDS_1717 flagellar FliL protein; PFAM: flagellar basal body-associated protein FliL; SPTR: Flagellar FliL protein; PFAM: Flagellar basal body-associated protein FliL; flagellar basal body-associated protein flil complement(1389255..1389791) Calditerrivibrio nitroreducens DSM 19672 10009357 YP_004051407.1 CDS Calni_1336 NC_014758.1 1389844 1390356 R KEGG: ddf:DEFDS_1480 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1389844..1390356) Calditerrivibrio nitroreducens DSM 19672 10009358 YP_004051408.1 CDS Calni_1337 NC_014758.1 1390346 1393078 R InterPro IPR019734: IPR013026: IPR001440; KEGG: ddf:DEFDS_1481 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: uncharacterized protein; PFAM: Tetratricopeptide repeat; tetratricopeptide tpr_1 repeat-containing protein complement(1390346..1393078) Calditerrivibrio nitroreducens DSM 19672 10009359 YP_004051409.1 CDS Calni_1338 NC_014758.1 1393189 1394463 R InterPro IPR003661; KEGG: ddf:DEFDS_1482 hypothetical protein; PFAM: histidine kinase A domain protein; SPTR: uncharacterized protein; PFAM: His Kinase A (phosphoacceptor) domain; histidine kinase a domain-containing protein complement(1393189..1394463) Calditerrivibrio nitroreducens DSM 19672 10009360 YP_004051410.1 CDS Calni_1339 NC_014758.1 1394435 1394797 R InterPro IPR002156; KEGG: ddf:DEFDS_1483 ribonuclease HI; PFAM: ribonuclease H; SPTR: Ribonuclease HI; PFAM: RNase H; ribonuclease h complement(1394435..1394797) Calditerrivibrio nitroreducens DSM 19672 10009361 YP_004051411.1 CDS Calni_1340 NC_014758.1 1394866 1395576 R COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: ddf:DEFDS_1484 hypothetical protein; PFAM: protein of unknown function DUF164; SPTR: uncharacterized protein; PFAM: zinc ribbon domain; hypothetical protein complement(1394866..1395576) Calditerrivibrio nitroreducens DSM 19672 10009362 YP_004051412.1 CDS Calni_1341 NC_014758.1 1395595 1396695 R COGs: COG0327 conserved hypothetical protein; InterPro IPR002678: IPR017221; KEGG: ddf:DEFDS_1485 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; hypothetical protein complement(1395595..1396695) Calditerrivibrio nitroreducens DSM 19672 10009363 YP_004051413.1 CDS Calni_1342 NC_014758.1 1397487 1398074 R COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: ant:Arnit_1839 multiple antibiotic resistance (MarC)-related protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: Multiple antibiotic resistance (MarC)-related protein; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; multiple antibiotic resistance (marc)-like protein complement(1397487..1398074) Calditerrivibrio nitroreducens DSM 19672 10009368 YP_004051414.1 CDS Calni_1343 NC_014758.1 1403495 1404550 R COGs: COG0082 Chorismate synthase; InterPro IPR020541: IPR000453; KEGG: ddf:DEFDS_0612 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase complement(1403495..1404550) Calditerrivibrio nitroreducens DSM 19672 10009374 YP_004051415.1 CDS Calni_1344 NC_014758.1 1404550 1405146 R COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: dap:Dacet_1832 oxidoreductase molybdopterin binding protein; PFAM: oxidoreductase molybdopterin binding; SPTR: Oxidoreductase molybdopterin binding protein; PFAM: Oxidoreductase molybdopterin binding domain; oxidoreductase molybdopterin binding protein complement(1404550..1405146) Calditerrivibrio nitroreducens DSM 19672 10009375 YP_004051416.1 CDS Calni_1345 NC_014758.1 1405154 1405486 R COGs: COG1993 conserved hypothetical protein; InterPro IPR003793; KEGG: ddf:DEFDS_0610 hypothetical protein; PFAM: protein of unknown function DUF190; SPTR: uncharacterized protein; PFAM: Uncharacterized ACR, COG1993; hypothetical protein complement(1405154..1405486) Calditerrivibrio nitroreducens DSM 19672 10009376 YP_004051417.1 CDS Calni_1346 NC_014758.1 1405495 1405863 R COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: dap:Dacet_1834 CrcB protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein crcB homolog; TIGRFAM: CrcB protein; PFAM: CrcB-like protein; TIGRFAM: crcB protein; camphor resistance protein crcb complement(1405495..1405863) Calditerrivibrio nitroreducens DSM 19672 10009377 YP_004051418.1 CDS Calni_1347 NC_014758.1 1405898 1406143 D KEGG: ddf:DEFDS_0608 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein 1405898..1406143 Calditerrivibrio nitroreducens DSM 19672 10009378 YP_004051419.1 CDS Calni_1348 NC_014758.1 1406337 1407716 D COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166: IPR006094: IPR004113; KEGG: ddf:DEFDS_1347 glycolate oxidase subunit GlcD; PFAM: FAD linked oxidase domain protein; SPTR: Glycolate oxidase, subunit GlcD; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; fad linked oxidase domain-containing protein 1406337..1407716 Calditerrivibrio nitroreducens DSM 19672 10009379 YP_004051420.1 CDS Calni_1349 NC_014758.1 1407718 1408962 D COGs: COG0247 Fe-S oxidoreductase; InterPro IPR017896: IPR017900: IPR004017: IPR012257; KEGG: ddf:DEFDS_1346 glycolate oxidase iron-sulfur subunit GlcF; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Glycolate oxidase, iron-sulfur subunit GlcF; PFAM: Cysteine-rich domain; hypothetical protein 1407718..1408962 Calditerrivibrio nitroreducens DSM 19672 10009380 YP_004051421.1 CDS Calni_1350 NC_014758.1 1408979 1410046 D COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: dat:HRM2_27390 DctP5; PFAM: Extracellular solute-binding protein, family 7; SPTR: Conserved hypothetical extracellular solute-binding protein,family 7; PFAM: Bacterial extracellular solute-binding protein, family 7; extracellular solute-binding protein 1408979..1410046 Calditerrivibrio nitroreducens DSM 19672 10009381 YP_004051422.1 CDS Calni_1351 NC_014758.1 1410093 1410590 D COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: dat:HRM2_27400 DctQ5; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Mannitol transporter; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite ATP-independent periplasmic transporter dctq component 1410093..1410590 Calditerrivibrio nitroreducens DSM 19672 10009382 YP_004051423.1 CDS Calni_1352 NC_014758.1 1410592 1411920 D COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656: IPR004681; KEGG: dat:HRM2_27410 DctM5; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: DctM5; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; trap dicarboxylate transporter subunit DctM 1410592..1411920 Calditerrivibrio nitroreducens DSM 19672 10009383 YP_004051424.1 CDS Calni_1353 NC_014758.1 1411928 1413334 D COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR000014: IPR013767: IPR003593; KEGG: slp:Slip_0883 sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; SMART: AAA ATPase; PAS domain containing protein; SPTR: sigma54 specific transcriptional regulator; TIGRFAM: PAS sensor protein; manually curated; PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box; sigma-54 specific transcriptional regulator 1411928..1413334 Calditerrivibrio nitroreducens DSM 19672 10009384 YP_004051425.1 CDS Calni_1354 NC_014758.1 1413561 1414739 D COGs: COG0183 acetyl-CoA acetyltransferase; InterPro IPR020615: IPR020610: IPR020613: IPR020616: IPR 020617: IPR002155; KEGG: ddf:DEFDS_1837 acetyl-CoA C-acetyltransferase; PFAM: Thiolase-like; PRIAM: acetyl-CoA C-acetyltransferase; SPTR: acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; acetyl-CoA acetyltransferase 1413561..1414739 Calditerrivibrio nitroreducens DSM 19672 10009385 YP_004051426.1 CDS Calni_1355 NC_014758.1 1414750 1416111 D COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004163: IPR004164: IPR004165: IPR014388: IPR 012792: IPR012791; KEGG: ddf:DEFDS_1919 3-oxoacid CoA-transferase; PFAM: coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3-oxoacid CoA-transferase, A subunit; 3-oxoacid CoA-transferase, b subunit 1414750..1416111 Calditerrivibrio nitroreducens DSM 19672 10009386 YP_004051427.1 CDS Calni_1356 NC_014758.1 1416174 1416932 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198: IPR011294; KEGG: hsm:HSM_0811 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase 1416174..1416932 Calditerrivibrio nitroreducens DSM 19672 10009387 YP_004051428.1 CDS Calni_1357 NC_014758.1 1417276 1418289 D COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218: IPR006268; KEGG: ddf:DEFDS_0830 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 1417276..1418289 Calditerrivibrio nitroreducens DSM 19672 10009388 YP_004051429.1 CDS Calni_1358 NC_014758.1 1418386 1419537 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467: IPR003594; KEGG: geo:Geob_3563 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase complement(1418386..1419537) Calditerrivibrio nitroreducens DSM 19672 10009389 YP_004051430.1 CDS Calni_1359 NC_014758.1 1419652 1420044 D COGs: COG0824 thioesterase; InterPro IPR013838: IPR006683: IPR006684; KEGG: ddf:DEFDS_1840 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; thioesterase superfamily protein 1419652..1420044 Calditerrivibrio nitroreducens DSM 19672 10009390 YP_004051431.1 CDS Calni_1360 NC_014758.1 1420221 1420952 D COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR007730: IPR000064; KEGG: sat:SYN_01486 cell wall-associated hydrolase; PFAM: NLP/P60 protein; Sporulation domain-containing protein; SPTR: Cell wall-associated hydrolase; PFAM: NlpC/P60 family; Sporulation related domain; nlp/p60 protein 1420221..1420952 Calditerrivibrio nitroreducens DSM 19672 10009391 YP_004051432.1 CDS Calni_1361 NC_014758.1 1420921 1421526 D COGs: COG0349 Ribonuclease D; InterPro IPR002562; KEGG: dsa:Desal_0122 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; SPTR: uncharacterized protein; PFAM: 3'-5' exonuclease; 3'-5' exonuclease 1420921..1421526 Calditerrivibrio nitroreducens DSM 19672 10009392 YP_004051433.1 CDS Calni_1362 NC_014758.1 1421531 1421965 R InterPro IPR008258; KEGG: glo:Glov_0964 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain; lytic transglycosylase complement(1421531..1421965) Calditerrivibrio nitroreducens DSM 19672 10009393 YP_004051434.1 CDS Calni_1363 NC_014758.1 1421962 1422597 R KEGG: ddf:DEFDS_1229 hypothetical protein; SPTR: uncharacterized protein; PFAM: Phosphorylase superfamily; hypothetical protein complement(1421962..1422597) Calditerrivibrio nitroreducens DSM 19672 10009394 YP_004051435.1 CDS Calni_1364 NC_014758.1 1422584 1423444 R COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171: IPR004620; KEGG: ddf:DEFDS_1143 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase complement(1422584..1423444) Calditerrivibrio nitroreducens DSM 19672 10009395 YP_004051436.1 CDS Calni_1365 NC_014758.1 1423501 1424121 D COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: ddf:DEFDS_1142 hypothetical protein; PFAM: Lytic transglycosylase catalytic; SPTR: uncharacterized protein; PFAM: Transglycosylase SLT domain; lytic transglycosylase 1423501..1424121 Calditerrivibrio nitroreducens DSM 19672 10009396 YP_004051437.1 CDS Calni_1366 NC_014758.1 1424072 1425154 R COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: dap:Dacet_1938 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1424072..1425154) Calditerrivibrio nitroreducens DSM 19672 10009397 YP_004051438.1 CDS Calni_1367 NC_014758.1 1425147 1426250 R COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: ddf:DEFDS_1140 peptidase M29, aminopeptidase II; PFAM: peptidase M29 aminopeptidase II; SPTR: Peptidase M29, aminopeptidase II; PFAM: Thermophilic metalloprotease (M29); peptidase m29 aminopeptidase ii complement(1425147..1426250) Calditerrivibrio nitroreducens DSM 19672 10009398 YP_004051439.1 CDS Calni_1368 NC_014758.1 1426252 1428057 R COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR000943: IPR007127: IPR009042: IPR007627: IPR 007624: IPR007630: IPR014284: IPR012760; KEGG: ddf:DEFDS_1486 DNA-directed RNA polymerase sigma 70 factor; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 factor, region 1.1; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase, sigma 70 subunit, rpod complement(1426252..1428057) Calditerrivibrio nitroreducens DSM 19672 10009399 YP_004051440.1 CDS Calni_1369 NC_014758.1 1428061 1429743 R COGs: COG0358 DNA primase; InterPro IPR002694: IPR013264: IPR006171: IPR006295: IPR 006154; KEGG: ddf:DEFDS_1487 DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; SPTR: DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core; DNA primase complement(1428061..1429743) Calditerrivibrio nitroreducens DSM 19672 10009400 YP_004051441.1 CDS Calni_1370 NC_014758.1 1429793 1430722 D COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR013563: IPR010066: IPR003593; KEGG: ddf:DEFDS_1489 peptide/nickel ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Peptide/nickel ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATPase 1429793..1430722 Calditerrivibrio nitroreducens DSM 19672 10009401 YP_004051442.1 CDS Calni_1371 NC_014758.1 1430710 1431375 D COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: hip:CGSHiEE_05330 dithiobiotin synthetase; SPTR: Dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase 1430710..1431375 Calditerrivibrio nitroreducens DSM 19672 10009402 YP_004051443.1 CDS Calni_1372 NC_014758.1 1431445 1433034 D COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR001270: IPR003959: IPR012763: IPR003593; KEGG: ddf:DEFDS_0141 DNA polymerase III gamma/tau subunits; PFAM: ATPase AAA; SMART: AAA ATPase; SPTR: DNA polymerase III, gamma/tau subunits; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma/tau 1431445..1433034 Calditerrivibrio nitroreducens DSM 19672 10009403 YP_004051444.1 CDS Calni_1373 NC_014758.1 1433053 1433367 D COGs: COG0718 conserved hypothetical protein; InterPro IPR004401; KEGG: ddf:DEFDS_0142 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein DEFDS_0142; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; hypothetical protein 1433053..1433367 Calditerrivibrio nitroreducens DSM 19672 10009404 YP_004051445.1 CDS Calni_1374 NC_014758.1 1433371 1433973 D COGs: COG0353 Recombinational DNA repair protein (RecF pathway); InterPro IPR015967: IPR006171: IPR000093: IPR006154; KEGG: ddf:DEFDS_0143 DNA recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain-containing protein; SPTR: DNA recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; DNA replication and repair protein recr 1433371..1433973 Calditerrivibrio nitroreducens DSM 19672 10009405 YP_004051446.1 CDS Calni_1375 NC_014758.1 1434008 1434490 D InterPro IPR008162: IPR004942; KEGG: ddf:DEFDS_0025 mutual gliding protein B; PFAM: Roadblock/LC7 family protein; SPTR: Mutual gliding protein B; PFAM: Roadblock/LC7 domain; roadblock/lc7 family protein 1434008..1434490 Calditerrivibrio nitroreducens DSM 19672 10009406 YP_004051447.1 CDS Calni_1376 NC_014758.1 1434493 1435071 D COGs: COG2229 GTPase; InterPro IPR001806; KEGG: ddf:DEFDS_0024 mutual gliding protein A; SPTR: Mutual gliding protein A; PFAM: ADP-ribosylation factor family; mutual gliding protein a 1434493..1435071 Calditerrivibrio nitroreducens DSM 19672 10009407 YP_004051448.1 CDS Calni_1377 NC_014758.1 1435081 1436598 D COGs: COG1530 Ribonuclease G and E; InterPro IPR003029: IPR019307: IPR004659; KEGG: ddf:DEFDS_0023 ribonuclease E and G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Ribonuclease E and G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; rnase g 1435081..1436598 Calditerrivibrio nitroreducens DSM 19672 10009408 YP_004051449.1 CDS Calni_1378 NC_014758.1 1436598 1437188 D COGs: COG0293 23S rRNA methylase; InterPro IPR002877: IPR016448; KEGG: ddf:DEFDS_0022 cell division protein methyltransferase FtsJ; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; SPTR: Cell division protein methyltransferase FtsJ; PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; 23S rRNA um-2552 2'-o-methyltransferase 1436598..1437188 Calditerrivibrio nitroreducens DSM 19672 10009409 YP_004051450.1 CDS Calni_1379 NC_014758.1 1437181 1437942 D COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: dap:Dacet_2374 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; manually curated; PFAM: AIR carboxylase; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (air) carboxylase 1437181..1437942 Calditerrivibrio nitroreducens DSM 19672 10009410 YP_004051451.1 CDS Calni_1380 NC_014758.1 1437935 1438687 D COGs: COG2043 conserved hypothetical protein; InterPro IPR003748; KEGG: ddf:DEFDS_0852 hypothetical protein; PFAM: protein of unknown function DUF169; SPTR: uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043; hypothetical protein 1437935..1438687 Calditerrivibrio nitroreducens DSM 19672 10009411 YP_004051452.1 CDS Calni_1381 NC_014758.1 1438696 1440117 D COGs: COG1109 Phosphomannomutase; InterPro IPR005841: IPR005844: IPR005845: IPR005846: IPR 005843; KEGG: ddf:DEFDS_0735 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain ii 1438696..1440117 Calditerrivibrio nitroreducens DSM 19672 10009412 YP_004051453.1 CDS Calni_1382 NC_014758.1 1440207 1442567 R COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR001633: IPR000160; KEGG: abu:Abu_1554 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: EAL/GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase complement(1440207..1442567) Calditerrivibrio nitroreducens DSM 19672 10009413 YP_004051454.1 CDS Calni_1383 NC_014758.1 1442760 1443062 R KEGG: dap:Dacet_1701 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1442760..1443062) Calditerrivibrio nitroreducens DSM 19672 10009414 YP_004051455.1 CDS Calni_1384 NC_014758.1 1443064 1443906 R COGs: COG0648 Endonuclease IV; InterPro IPR001719: IPR018246: IPR012307; KEGG: ddf:DEFDS_1407 endonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: Probable endonuclease 4; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1); apurinic endonuclease apn1 complement(1443064..1443906) Calditerrivibrio nitroreducens DSM 19672 10009415 YP_004051456.1 CDS Calni_1385 NC_014758.1 1443912 1444913 R COGs: COG0158 Fructose-1 6-bisphosphatase; InterPro IPR020548: IPR000146; KEGG: ddf:DEFDS_1408 fructose-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase class 1; PFAM: Fructose-1-6-bisphosphatase; d-fructose 1,6-bisphosphatase complement(1443912..1444913) Calditerrivibrio nitroreducens DSM 19672 10009416 YP_004051457.1 CDS Calni_1386 NC_014758.1 1444937 1446082 R COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR000189: IPR008258; KEGG: pmx:PERMA_1958 membrane-bound lytic murein transglycosylase C; PFAM: Lytic transglycosylase catalytic; SPTR: Membrane-bound lytic murein transglycosylase C; PFAM: Transglycosylase SLT domain; Domain of unknown function (DUF3393); lytic transglycosylase complement(1444937..1446082) Calditerrivibrio nitroreducens DSM 19672 10009417 YP_004051458.1 CDS Calni_1387 NC_014758.1 1446092 1446499 R KEGG: pmx:PERMA_1959 lipoprotein; SPTR: lipoprotein; lipoprotein complement(1446092..1446499) Calditerrivibrio nitroreducens DSM 19672 10009418 YP_004051459.1 CDS Calni_1388 NC_014758.1 1446564 1447145 R KEGG: pmx:PERMA_1960 lipoprotein; SPTR: lipoprotein; lipoprotein complement(1446564..1447145) Calditerrivibrio nitroreducens DSM 19672 10009419 YP_004051460.1 CDS Calni_1389 NC_014758.1 1447220 1448656 R KEGG: dap:Dacet_1760 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1447220..1448656) Calditerrivibrio nitroreducens DSM 19672 10009420 YP_004051461.1 CDS Calni_1390 NC_014758.1 1448670 1449188 R KEGG: dap:Dacet_0027 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1448670..1449188) Calditerrivibrio nitroreducens DSM 19672 10009421 YP_004051462.1 CDS Calni_1391 NC_014758.1 1449314 1450006 D InterPro IPR006860; KEGG: pmx:PERMA_0987 hypothetical protein; PFAM: FecR protein; SPTR: uncharacterized protein; PFAM: FecR protein; fecr protein 1449314..1450006 Calditerrivibrio nitroreducens DSM 19672 10009422 YP_004051463.1 CDS Calni_1392 NC_014758.1 1450016 1450933 D COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: gvi:glr4409 hypothetical protein; PFAM: Integral membrane protein TerC; SPTR: Glr4409 protein; PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family; integral membrane protein terc 1450016..1450933 Calditerrivibrio nitroreducens DSM 19672 10009423 YP_004051464.1 CDS Calni_1393 NC_014758.1 1450977 1452179 D COGs: COG2206 HD-GYP domain; InterPro IPR006674: IPR006675: IPR003607; KEGG: dap:Dacet_1782 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: Domain of unknown function (DUF3391); HD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 1450977..1452179 Calditerrivibrio nitroreducens DSM 19672 10009424 YP_004051465.1 CDS Calni_1394 NC_014758.1 1452317 1454101 R COGs: COG0038 Chloride channel protein EriC; InterPro IPR000644: IPR001807; KEGG: ddf:DEFDS_1871 chloride channel protein, CIC family; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; SPTR: Chloride channel protein, CIC family; PFAM: CBS domain; Voltage gated chloride channel; cl- channel voltage-gated family protein complement(1452317..1454101) Calditerrivibrio nitroreducens DSM 19672 10009426 YP_004051466.1 CDS Calni_1395 NC_014758.1 1454091 1454858 R COGs: COG0390 ABC-type uncharacterized transport system permease component; InterPro IPR005226; KEGG: ddf:DEFDS_1870 ABC transporter permease; PFAM: hypothetical protein; SPTR: ABC transporter, permease; PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: conserved hypothetical protein TIGR00245; hypothetical protein complement(1454091..1454858) Calditerrivibrio nitroreducens DSM 19672 10009427 YP_004051467.1 CDS Calni_1396 NC_014758.1 1454861 1455553 R COGs: COG4619 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: ddf:DEFDS_1869 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter complement(1454861..1455553) Calditerrivibrio nitroreducens DSM 19672 10009428 YP_004051468.1 CDS Calni_1397 NC_014758.1 1455550 1456284 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ddf:DEFDS_1868 methyltransferase UbiE/COQ5 family; PFAM: Methyltransferase type 11; SPTR: Methyltransferase, UbiE/COQ5 family; PFAM: Methyltransferase domain; type 11 methyltransferase complement(1455550..1456284) Calditerrivibrio nitroreducens DSM 19672 10009429 YP_004051469.1 CDS Calni_1398 NC_014758.1 1456265 1457395 R COGs: COG2021 Homoserine acetyltransferase; InterPro IPR000073: IPR008220: IPR006296; KEGG: ddf:DEFDS_1867 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; PRIAM: Homoserine O-acetyltransferase; SPTR: Homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; homoserine o-acetyltransferase complement(1456265..1457395) Calditerrivibrio nitroreducens DSM 19672 10009430 YP_004051470.1 CDS Calni_1399 NC_014758.1 1457615 1458262 R COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037; KEGG: ddf:DEFDS_0571 K+ transport (Trk) system NAD-binding component; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: K+ transport (Trk) system, NAD-binding component; PFAM: TrkA-N domain; TrkA-C domain; TrkA domain-containing protein complement(1457615..1458262) Calditerrivibrio nitroreducens DSM 19672 10009431 YP_004051471.1 CDS Calni_1400 NC_014758.1 1458266 1459552 R COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: ddf:DEFDS_0570 K+ transport (Trk) system membrane component; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: K+ transport (Trk) system, membrane component; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; h(+)-transporting two-sector atpase complement(1458266..1459552) Calditerrivibrio nitroreducens DSM 19672 10009432 YP_004051472.1 CDS Calni_1401 NC_014758.1 1459976 1461187 R COGs: COG1373 ATPase (AAA+ superfamily); InterPro IPR020548; KEGG: tye:THEYE_A2038 ATPase; SPTR: ATPase; atpase complement(1459976..1461187) Calditerrivibrio nitroreducens DSM 19672 10009433 YP_004051473.1 CDS Calni_1402 NC_014758.1 1461502 1461762 R COGs: COG3943 Virulence protein; KEGG: ddf:DEFDS_0287 death-on-curing family protein; SPTR: Death-on-curing family protein; death-on-curing family protein complement(1461502..1461762) Calditerrivibrio nitroreducens DSM 19672 10009434 YP_004051474.1 CDS Calni_1403 NC_014758.1 1461895 1463157 R KEGG: phe:Phep_1796 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1461895..1463157) Calditerrivibrio nitroreducens DSM 19672 10009435 YP_004051475.1 CDS Calni_1404 NC_014758.1 1463154 1465163 R InterPro IPR003165; KEGG: phe:Phep_1797 hypothetical protein; PFAM: stem cell self-renewal protein Piwi; SPTR: uncharacterized protein; stem cell self-renewal protein piwi complement(1463154..1465163) Calditerrivibrio nitroreducens DSM 19672 10009436 YP_004051476.1 CDS Calni_1405 NC_014758.1 1465205 1467802 R COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052: IPR002296: IPR003356: IPR000055; KEGG: cph:Cpha266_0895 N-6 DNA methylase; PFAM: restriction modification system DNA specificity domain; N-6 DNA methylase; SPTR: N-6 DNA methylase; PFAM: N-6 DNA Methylase; Type I restriction modification DNA specificity domain; restriction modification system DNA specificity domain complement(1465205..1467802) Calditerrivibrio nitroreducens DSM 19672 10009437 YP_004051477.1 CDS Calni_1406 NC_014758.1 1467887 1470421 R COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014021: IPR007409: IPR006935: IPR014001; KEGG: slt:Slit_1091 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicase; SPTR: Type III restriction protein res subunit; PFAM: Type III restriction enzyme, res subunit; type III restriction protein res subunit complement(1467887..1470421) Calditerrivibrio nitroreducens DSM 19672 10009438 YP_004051478.1 CDS Calni_1407 NC_014758.1 1470545 1472083 R InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_1269 hypothetical protein; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA complement(1470545..1472083) Calditerrivibrio nitroreducens DSM 19672 10009439 YP_004051479.1 CDS Calni_1408 NC_014758.1 1472345 1474027 D COGs: COG0661 unusual protein kinase; InterPro IPR000719: IPR004147; KEGG: ddf:DEFDS_0407 2-octaprenylphenol hydroxylase; PFAM: ABC-1 domain-containing protein; SPTR: 2-octaprenylphenol hydroxylase; PFAM: Phosphotransferase enzyme family; ABC1 family; ABC-1 domain-containing protein 1472345..1474027 Calditerrivibrio nitroreducens DSM 19672 10009440 YP_004051480.1 CDS Calni_1409 NC_014758.1 1474050 1475654 D COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; KEGG: dap:Dacet_2757 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; beta-lactamase 1474050..1475654 Calditerrivibrio nitroreducens DSM 19672 10009441 YP_004051481.1 CDS Calni_1410 NC_014758.1 1475641 1476432 D COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: ddf:DEFDS_0409 undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; bacitracin resistance protein baca 1475641..1476432 Calditerrivibrio nitroreducens DSM 19672 10009442 YP_004051482.1 CDS Calni_1411 NC_014758.1 1476423 1478636 D COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543: IPR018541: IPR003593; KEGG: ddf:DEFDS_0410 DNA segregation ATPase FtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; DNA translocase ftsk 1476423..1478636 Calditerrivibrio nitroreducens DSM 19672 10009443 YP_004051483.1 CDS Calni_1412 NC_014758.1 1478644 1480452 D COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR001943: IPR000305: IPR001162: IPR004791; KEGG: dap:Dacet_2332 excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: UvrABC system protein C; TIGRFAM: excinuclease ABC, C subunit; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC, c subunit 1478644..1480452 Calditerrivibrio nitroreducens DSM 19672 10009444 YP_004051484.1 CDS Calni_1413 NC_014758.1 1480449 1481174 D COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR020904: IPR002347: IPR002198; KEGG: ddf:DEFDS_1320 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr 1480449..1481174 Calditerrivibrio nitroreducens DSM 19672 10009445 YP_004051485.1 CDS Calni_1414 NC_014758.1 1481255 1482127 R COGs: COG0264 Translation elongation factor Ts; InterPro IPR018101: IPR000449: IPR014039: IPR001816; KEGG: dap:Dacet_2531 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; SPTR: Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor ts (ef-ts) complement(1481255..1482127) Calditerrivibrio nitroreducens DSM 19672 10009446 YP_004051486.1 CDS Calni_1415 NC_014758.1 1482130 1482933 R COGs: COG0052 Ribosomal protein S2; InterPro IPR018130: IPR001865: IPR005706; KEGG: ddf:DEFDS_0051 30S ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 complement(1482130..1482933) Calditerrivibrio nitroreducens DSM 19672 10009447 YP_004051487.1 CDS Calni_1416 NC_014758.1 1483101 1484414 R InterPro IPR002559; KEGG: sso:SSO1775 transposase ISC1359; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4 family protein; PFAM: Transposase DDE domain; transposase is4 family protein complement(1483101..1484414) Calditerrivibrio nitroreducens DSM 19672 10009448 YP_004051488.1 CDS Calni_1417 NC_014758.1 1484535 1486301 D KEGG: ddf:DEFDS_2176 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1484535..1486301 Calditerrivibrio nitroreducens DSM 19672 10009449 YP_004051489.1 CDS Calni_1418 NC_014758.1 1486291 1487241 D COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: ddf:DEFDS_2177 hypothetical protein; PFAM: ADP-ribosylation/Crystallin J1; SPTR: uncharacterized protein; PFAM: ADP-ribosylglycohydrolase; ADP-ribosylation/crystallin j1 1486291..1487241 Calditerrivibrio nitroreducens DSM 19672 10009450 YP_004051490.1 CDS Calni_1419 NC_014758.1 1487260 1487754 R COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021: IPR001579: IPR002071; KEGG: lpa:lpa_00291 hypothetical protein; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein); SPTR: uncharacterized protein; PFAM: Staphylococcal nuclease homologue; nuclease (snase domain-containing protein) complement(1487260..1487754) Calditerrivibrio nitroreducens DSM 19672 10009451 YP_004051491.1 CDS Calni_1420 NC_014758.1 1487747 1489489 R COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR000121: IPR006318: IPR008731: IPR008279; KEGG: ddf:DEFDS_1054 PTS system transporter enzyme I; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; SPTR: PTS system, enzyme I, phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(1487747..1489489) Calditerrivibrio nitroreducens DSM 19672 10009452 YP_004051492.1 CDS Calni_1421 NC_014758.1 1489486 1489761 R COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR000032: IPR001020: IPR005698; KEGG: ddf:DEFDS_1053 PTS system transporter histidine-containing phosphocarrier protein HPr; PFAM: phosphoryl transfer system HPr; SPTR: PTS system, histidine-containing phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system, phosphocarrier protein hpr complement(1489486..1489761) Calditerrivibrio nitroreducens DSM 19672 10009453 YP_004051493.1 CDS Calni_1422 NC_014758.1 1489761 1490471 R COGs: COG3716 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IID; InterPro IPR004704; KEGG: ddf:DEFDS_1052 hypothetical protein; PFAM: PTS system mannose/fructose/sorbose family IID component; SPTR: uncharacterized protein; PFAM: PTS system mannose/fructose/sorbose family IID component; PTS system mannose/fructose/sorbose family iid component complement(1489761..1490471) Calditerrivibrio nitroreducens DSM 19672 10009454 YP_004051494.1 CDS Calni_1423 NC_014758.1 1490456 1491088 R KEGG: dap:Dacet_1316 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1490456..1491088) Calditerrivibrio nitroreducens DSM 19672 10009455 YP_004051495.1 CDS Calni_1424 NC_014758.1 1491085 1491573 R COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB; InterPro IPR004720; KEGG: ddf:DEFDS_1050 PTS system fructose-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component; SPTR: PTS system, fructose-specific enzyme II, B component; PFAM: PTS system sorbose subfamily IIB component; PTS system sorbose subfamily iib component complement(1491085..1491573) Calditerrivibrio nitroreducens DSM 19672 10009456 YP_004051496.1 CDS Calni_1425 NC_014758.1 1491570 1491968 R COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA; InterPro IPR004701; KEGG: dap:Dacet_1314 PTS system fructose subfamily IIA component; PFAM: PTS system fructose subfamily IIA component; SPTR: PTS system fructose subfamily IIA component; PFAM: PTS system fructose IIA component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA component; PTS system fructose subfamily iia component complement(1491570..1491968) Calditerrivibrio nitroreducens DSM 19672 10009457 YP_004051497.1 CDS Calni_1426 NC_014758.1 1491972 1492826 R COGs: COG1660 P-loop-containing kinase; InterPro IPR005337; KEGG: ddf:DEFDS_1048 hypothetical protein; SPTR: UPF0042 nucleotide-binding protein DEFDS_1048; PFAM: P-loop ATPase protein family; hypothetical protein complement(1491972..1492826) Calditerrivibrio nitroreducens DSM 19672 10009458 YP_004051498.1 CDS Calni_1427 NC_014758.1 1492828 1493805 R COGs: COG1493 Serine kinase of the HPr protein regulates carbohydrate metabolism; InterPro IPR011126: IPR011104: IPR003755; KEGG: ddf:DEFDS_1047 HPr kinase; PFAM: HPr serine kinase domain-containing protein; SPTR: HPr kinase; TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase; hpr(ser) kinase/phosphatase complement(1492828..1493805) Calditerrivibrio nitroreducens DSM 19672 10009459 YP_004051499.1 CDS Calni_1428 NC_014758.1 1493771 1494262 R COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: ddf:DEFDS_1046 PTS system fructose-specific transporter subunit IIA; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: PTS system, fructose-specific enzyme II, A component; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS iia-like nitrogen-regulatory protein PTSn complement(1493771..1494262) Calditerrivibrio nitroreducens DSM 19672 10009460 YP_004051500.1 CDS Calni_1429 NC_014758.1 1494271 1494807 R COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: ddf:DEFDS_1045 sigma 54 modulation protein/ribosomal protein S30EA; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; SPTR: Sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; sigma 54 modulation protein/ribosomal protein s30ea complement(1494271..1494807) Calditerrivibrio nitroreducens DSM 19672 10009461 YP_004051501.1 CDS Calni_1430 NC_014758.1 1494835 1496229 R COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394: IPR007046: IPR007634; KEGG: ddf:DEFDS_1044 DNA-directed RNA polymerase sigma 54 factor; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: DNA-directed RNA polymerase sigma 54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase, sigma 54 subunit, rpon complement(1494835..1496229) Calditerrivibrio nitroreducens DSM 19672 10009462 YP_004051502.1 CDS Calni_1431 NC_014758.1 1496226 1496945 R COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: dap:Dacet_1308 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; ABC transporter complement(1496226..1496945) Calditerrivibrio nitroreducens DSM 19672 10009463 YP_004051503.1 CDS Calni_1432 NC_014758.1 1496887 1497417 R COGs: COG1934 conserved hypothetical protein; InterPro IPR005653; KEGG: ddf:DEFDS_1042 hypothetical protein; PFAM: OstA family protein; SPTR: uncharacterized protein; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; osta family protein complement(1496887..1497417) Calditerrivibrio nitroreducens DSM 19672 10009464 YP_004051504.1 CDS Calni_1433 NC_014758.1 1497407 1497943 R KEGG: dap:Dacet_1306 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1497407..1497943) Calditerrivibrio nitroreducens DSM 19672 10009465 YP_004051505.1 CDS Calni_1434 NC_014758.1 1497910 1498410 R COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR005834: IPR010023: IPR006549; KEGG: ddf:DEFDS_1040 3-deoxy-manno-octulosonate-8-phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: 3-deoxy-manno-octulosonate-8-phosphatase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, yrbi family complement(1497910..1498410) Calditerrivibrio nitroreducens DSM 19672 10009466 YP_004051506.1 CDS Calni_1435 NC_014758.1 1498407 1499369 R COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR000644: IPR001347: IPR004800; KEGG: ddf:DEFDS_1039 arabinose-5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; PRIAM: Arabinose-5-phosphate isomerase; SMART: CBS domain containing protein; SPTR: Arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; kpsf/gutq family protein complement(1498407..1499369) Calditerrivibrio nitroreducens DSM 19672 10009467 YP_004051507.1 CDS Calni_1436 NC_014758.1 1499366 1500133 R COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218: IPR006269; KEGG: tye:THEYE_A1729 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(1499366..1500133) Calditerrivibrio nitroreducens DSM 19672 10009468 YP_004051508.1 CDS Calni_1437 NC_014758.1 1500133 1501755 R COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR017926: IPR017456: IPR000991: IPR004468; KEGG: ddf:DEFDS_1037 CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; ctp synthase complement(1500133..1501755) Calditerrivibrio nitroreducens DSM 19672 10009469 YP_004051509.1 CDS Calni_1438 NC_014758.1 1501748 1502479 R COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR003329: IPR004528; KEGG: dap:Dacet_1303 3-deoxy-D-manno-octulosonatecytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-d-manno- octulosonatecytidylyltransferase complement(1501748..1502479) Calditerrivibrio nitroreducens DSM 19672 10009470 YP_004051510.1 CDS Calni_1439 NC_014758.1 1502482 1502838 R COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); InterPro IPR008278: IPR004568: IPR002582; KEGG: dap:Dacet_1302 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Holo-[acyl-carrier-protein] synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase; holo-(acyl-carrier-protein) synthase complement(1502482..1502838) Calditerrivibrio nitroreducens DSM 19672 10009471 YP_004051511.1 CDS Calni_1440 NC_014758.1 1502843 1503574 R COGs: COG0854 Pyridoxal phosphate biosynthesis protein; InterPro IPR004569; KEGG: ddf:DEFDS_1034 pyridoxine 5-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase complement(1502843..1503574) Calditerrivibrio nitroreducens DSM 19672 10009472 YP_004051512.1 CDS Calni_1441 NC_014758.1 1503571 1504923 R COGs: COG1109 Phosphomannomutase; InterPro IPR016066: IPR005841: IPR005844: IPR005845: IPR 005846: IPR005843: IPR006352; KEGG: ddf:DEFDS_1033 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase complement(1503571..1504923) Calditerrivibrio nitroreducens DSM 19672 10009473 YP_004051513.1 CDS Calni_1442 NC_014758.1 1504920 1505816 R InterPro IPR012505; KEGG: ddf:DEFDS_1032 hypothetical protein; PFAM: YbbR family protein; SPTR: uncharacterized protein; PFAM: YbbR-like protein; ybbr family protein complement(1504920..1505816) Calditerrivibrio nitroreducens DSM 19672 10009474 YP_004051514.1 CDS Calni_1443 NC_014758.1 1505806 1506585 R COGs: COG1624 conserved hypothetical protein; InterPro IPR003390: IPR014046; KEGG: ddf:DEFDS_1031 hypothetical protein; PFAM: protein of unknown function DUF147; SPTR: uncharacterized protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: conserved hypothetical protein TIGR00159; hypothetical protein complement(1505806..1506585) Calditerrivibrio nitroreducens DSM 19672 10009475 YP_004051515.1 CDS Calni_1444 NC_014758.1 1506579 1507769 R COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489: IPR006390; KEGG: ddf:DEFDS_1030 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; dihydropteroate synthase complement(1506579..1507769) Calditerrivibrio nitroreducens DSM 19672 10009476 YP_004051516.1 CDS Calni_1445 NC_014758.1 1507773 1509584 R COGs: COG0465 ATP-dependent Zn protease; InterPro IPR003960: IPR003959: IPR000642: IPR005936: IPR 003593; KEGG: ddf:DEFDS_1029 cell division protein FtsH; PFAM: peptidase M41; ATPase AAA; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: Cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; membrane protease ftsh catalytic subunit complement(1507773..1509584) Calditerrivibrio nitroreducens DSM 19672 10009477 YP_004051517.1 CDS Calni_1446 NC_014758.1 1509593 1510126 R COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836: IPR005904; KEGG: ddf:DEFDS_1028 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(1509593..1510126) Calditerrivibrio nitroreducens DSM 19672 10009478 YP_004051518.1 CDS Calni_1447 NC_014758.1 1510126 1511388 R COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR003006: IPR011063: IPR012795: IPR012796; KEGG: ddf:DEFDS_1027 cell cycle protein MesJ; PFAM: PP-loop domain protein; SPTR: Cell cycle protein MesJ; TIGRFAM: tRNA(Ile)-lysidine synthetase; manually curated; PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(ile)-lysidine synthetase complement(1510126..1511388) Calditerrivibrio nitroreducens DSM 19672 10009479 YP_004051519.1 CDS Calni_1448 NC_014758.1 1511348 1512709 R COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR018189: IPR001672; KEGG: dap:Dacet_1293 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase complement(1511348..1512709) Calditerrivibrio nitroreducens DSM 19672 10009480 YP_004051520.1 CDS Calni_1449 NC_014758.1 1512766 1514520 R COGs: COG1199 Rad3-related DNA helicase; InterPro IPR014013: IPR011545: IPR014001: IPR006555; KEGG: dap:Dacet_1292 helicase C2; PFAM: DEAD/DEAH box helicase domain protein; SMART: helicase c2; DEAD-like helicase; SPTR: Helicase c2; PFAM: DEAD_2; DEAD/DEAH box helicase; dead/deah box helicase domain-containing protein complement(1512766..1514520) Calditerrivibrio nitroreducens DSM 19672 10009481 YP_004051521.1 CDS Calni_1450 NC_014758.1 1514524 1516059 R COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR007831; KEGG: ddf:DEFDS_1025 hypothetical protein; PFAM: General secretory system II protein E domain protein; SPTR: uncharacterized protein; PFAM: GSPII_E N-terminal domain; general secretory system ii protein e domain-containing protein complement(1514524..1516059) Calditerrivibrio nitroreducens DSM 19672 10009482 YP_004051522.1 CDS Calni_1451 NC_014758.1 1516133 1517020 R COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: bfs:BF2465 hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: uncharacterized protein; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase; nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase complement(1516133..1517020) Calditerrivibrio nitroreducens DSM 19672 10009483 YP_004051523.1 CDS Calni_1452 NC_014758.1 1517020 1518039 R COGs: COG2957 Peptidylarginine deiminase; InterPro IPR007466; KEGG: pdi:BDI_1176 hypothetical protein; PFAM: Porphyromonas-type peptidyl-arginine deiminase; PRIAM: Agmatine deiminase; SPTR: uncharacterized protein; PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase complement(1517020..1518039) Calditerrivibrio nitroreducens DSM 19672 10009484 YP_004051524.1 CDS Calni_1453 NC_014758.1 1518155 1519783 D COGs: COG0018 Arginyl-tRNA synthetase; InterPro IPR001412: IPR015945: IPR005148: IPR008909: IPR 001278; KEGG: ddf:DEFDS_1359 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 1518155..1519783 Calditerrivibrio nitroreducens DSM 19672 10009485 YP_004051525.1 CDS Calni_1454 NC_014758.1 1519793 1520731 D InterPro IPR007730; KEGG: ddf:DEFDS_1358 hypothetical protein; PFAM: Sporulation domain-containing protein; SPTR: uncharacterized protein; PFAM: Sporulation related domain; sporulation domain-containing protein 1519793..1520731 Calditerrivibrio nitroreducens DSM 19672 10009486 YP_004051526.1 CDS Calni_1455 NC_014758.1 1520742 1521767 D COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006686: IPR006685; KEGG: tye:THEYE_A1970 integral membrane protein; PFAM: MscS Mechanosensitive ion channel; SPTR: integral membrane protein; PFAM: Mechanosensitive ion channel; mscs mechanosensitive ion channel 1520742..1521767 Calditerrivibrio nitroreducens DSM 19672 10009487 YP_004051527.1 CDS Calni_1456 NC_014758.1 1521802 1524270 R COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR019776: IPR001444: IPR011491: IPR010930: IPR 020013; KEGG: ddf:DEFDS_1720 flagellar hook protein FlgE; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal body FlaE domain protein; SPTR: Flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: flagellar hook protein FlgE, epsilon proteobacterial; fagellar hook-basal body proteins; fagellar hook-basal body protein complement(1521802..1524270) Calditerrivibrio nitroreducens DSM 19672 10009488 YP_004051528.1 CDS Calni_1457 NC_014758.1 1524286 1524954 R COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: ddf:DEFDS_1721 flagellar basal-body rod modification protein FlgD; PFAM: flagellar hook capping protein; SPTR: Flagellar basal-body rod modification protein FlgD; PFAM: Flagellar hook capping protein; flagellar hook capping protein complement(1524286..1524954) Calditerrivibrio nitroreducens DSM 19672 10009489 YP_004051529.1 CDS Calni_1458 NC_014758.1 1524963 1526153 R InterPro IPR021136; KEGG: ddf:DEFDS_1722 hypothetical protein; PFAM: Flagellar hook-length control protein-like, C-terminal domain; SPTR: uncharacterized protein fliK; PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein-like, c-terminal domain complement(1524963..1526153) Calditerrivibrio nitroreducens DSM 19672 10009490 YP_004051530.1 CDS Calni_1459 NC_014758.1 1526226 1527326 R COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: ddf:DEFDS_1723 lipid A disaccharide synthetase; PFAM: glycosyl transferase family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: Lipid A disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; lipid-a-disaccharide synthase complement(1526226..1527326) Calditerrivibrio nitroreducens DSM 19672 10009491 YP_004051531.1 CDS Calni_1460 NC_014758.1 1527323 1529683 R COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR001775: IPR011662: IPR005644: IPR004846; KEGG: ddf:DEFDS_1724 hypothetical protein; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; SPTR: uncharacterized protein; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type II and iii secretion system protein complement(1527323..1529683) Calditerrivibrio nitroreducens DSM 19672 10009492 YP_004051532.1 CDS Calni_1461 NC_014758.1 1529680 1530201 R COGs: COG3168 Tfp pilus assembly protein PilP; KEGG: ddf:DEFDS_1725 hypothetical protein; SPTR: uncharacterized protein; PFAM: Pilus assembly protein, PilP; hypothetical protein complement(1529680..1530201) Calditerrivibrio nitroreducens DSM 19672 10009493 YP_004051533.1 CDS Calni_1462 NC_014758.1 1530198 1530821 R COGs: COG3167 Tfp pilus assembly protein PilO; KEGG: ddf:DEFDS_1726 hypothetical protein; SPTR: uncharacterized protein; PFAM: Pilus assembly protein, PilO; hypothetical protein complement(1530198..1530821) Calditerrivibrio nitroreducens DSM 19672 10009494 YP_004051534.1 CDS Calni_1463 NC_014758.1 1530823 1531368 R COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: ddf:DEFDS_1727 hypothetical protein; PFAM: Fimbrial assembly family protein; SPTR: uncharacterized protein; PFAM: Fimbrial assembly protein (PilN); fimbrial assembly family protein complement(1530823..1531368) Calditerrivibrio nitroreducens DSM 19672 10009495 YP_004051535.1 CDS Calni_1464 NC_014758.1 1531365 1532405 R COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: ddf:DEFDS_1728 type IV pilus assembly protein PilM; SPTR: Type IV pilus assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM; type IV pilus assembly protein pilm complement(1531365..1532405) Calditerrivibrio nitroreducens DSM 19672 10009496 YP_004051536.1 CDS Calni_1465 NC_014758.1 1532424 1532762 R COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496; KEGG: dap:Dacet_0283 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-amp cyclohydrolase complement(1532424..1532762) Calditerrivibrio nitroreducens DSM 19672 10009497 YP_004051537.1 CDS Calni_1466 NC_014758.1 1532804 1533079 R KEGG: dap:Dacet_0282 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1532804..1533079) Calditerrivibrio nitroreducens DSM 19672 10009498 YP_004051538.1 CDS Calni_1467 NC_014758.1 1533036 1534019 R COGs: COG0309 Hydrogenase maturation factor; InterPro IPR010916: IPR000728: IPR010918: IPR011854; KEGG: ddf:DEFDS_1730 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; SPTR: Hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein hype complement(1533036..1534019) Calditerrivibrio nitroreducens DSM 19672 10009499 YP_004051539.1 CDS Calni_1468 NC_014758.1 1534012 1535109 R COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: ddf:DEFDS_1731 hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; SPTR: Hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein hypd complement(1534012..1535109) Calditerrivibrio nitroreducens DSM 19672 10009500 YP_004051540.1 CDS Calni_1469 NC_014758.1 1535084 1535320 R COGs: COG0298 Hydrogenase maturation factor; InterPro IPR001109; KEGG: ddf:DEFDS_1732 hydrogenase expression/formation protein HupF/HypC; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); SPTR: Hydrogenase expression/formation protein HupF/HypC; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone hypc/hupf complement(1535084..1535320) Calditerrivibrio nitroreducens DSM 19672 10009501 YP_004051541.1 CDS Calni_1470 NC_014758.1 1535439 1536950 R COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR011031; KEGG: ddf:DEFDS_1733 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; PFAM: NapC/NirT cytochrome c family, N-terminal region; multiheme c-type cytochrome complement(1535439..1536950) Calditerrivibrio nitroreducens DSM 19672 10009502 YP_004051542.1 CDS Calni_1471 NC_014758.1 1537006 1537323 R InterPro IPR020537: IPR000454: IPR002379: IPR005953; KEGG: ddf:DEFDS_1734 hypothetical protein; PFAM: H+transporting two-sector ATPase C subunit; SPTR: ATP synthase subunit c; TIGRFAM: ATP synthase F0, C subunit; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase f0 subcomplex c subunit complement(1537006..1537323) Calditerrivibrio nitroreducens DSM 19672 10009503 YP_004051543.1 CDS Calni_1472 NC_014758.1 1537351 1538022 R COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: ddf:DEFDS_1735 F0F1-type ATP synthase A subunit; PFAM: H+transporting two-sector ATPase A subunit; SPTR: ATP synthase subunit a; TIGRFAM: ATP synthase F0, A subunit; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); ATP synthase f0 subcomplex a subunit complement(1537351..1538022) Calditerrivibrio nitroreducens DSM 19672 10009504 YP_004051544.1 CDS Calni_1473 NC_014758.1 1538006 1538395 R KEGG: ddf:DEFDS_1736 hypothetical protein; SPTR: uncharacterized protein; PFAM: ATP synthase I chain; hypothetical protein complement(1538006..1538395) Calditerrivibrio nitroreducens DSM 19672 10009505 YP_004051545.1 CDS Calni_1474 NC_014758.1 1538367 1538597 R KEGG: ddf:DEFDS_1737 hypothetical protein; SPTR: uncharacterized protein; PFAM: F0F1-ATPase subunit (ATPase_gene1); hypothetical protein complement(1538367..1538597) Calditerrivibrio nitroreducens DSM 19672 10009506 YP_004051546.1 CDS Calni_1475 NC_014758.1 1538594 1539862 R COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814: IPR004639; KEGG: ddf:DEFDS_1739 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde 2,1-aminomutase complement(1538594..1539862) Calditerrivibrio nitroreducens DSM 19672 10009507 YP_004051547.1 CDS Calni_1476 NC_014758.1 1539859 1541658 R COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR003593; KEGG: aar:Acear_0373 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; ABC transporter complement(1539859..1541658) Calditerrivibrio nitroreducens DSM 19672 10009508 YP_004051548.1 CDS Calni_1477 NC_014758.1 1541649 1542374 R COGs: COG0648 Endonuclease IV; InterPro IPR012307: IPR001719; KEGG: ddf:DEFDS_1740 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SMART: AP endonuclease family 2; SPTR: uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein tim barrel complement(1541649..1542374) Calditerrivibrio nitroreducens DSM 19672 10009509 YP_004051549.1 CDS Calni_1478 NC_014758.1 1542371 1542919 R COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: abi:Aboo_1355 class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SPTR: Class II Aldolase and Adducin N-terminal domain, putative; PFAM: Class II Aldolase and Adducin N-terminal domain; class ii aldolase/adducin family protein complement(1542371..1542919) Calditerrivibrio nitroreducens DSM 19672 10009510 YP_004051550.1 CDS Calni_1479 NC_014758.1 1542969 1543349 R COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: ddf:DEFDS_1744 50S ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 complement(1542969..1543349) Calditerrivibrio nitroreducens DSM 19672 10009511 YP_004051551.1 CDS Calni_1480 NC_014758.1 1543339 1544349 R COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterPro IPR011261: IPR011262: IPR011260: IPR011773: IPR 011263; KEGG: ddf:DEFDS_1745 DNA-directed RNA polymerase subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha complement(1543339..1544349) Calditerrivibrio nitroreducens DSM 19672 10009512 YP_004051552.1 CDS Calni_1481 NC_014758.1 1544374 1545000 R COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR002942: IPR018079: IPR001912: IPR005709; KEGG: ddf:DEFDS_1746 30S ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 complement(1544374..1545000) Calditerrivibrio nitroreducens DSM 19672 10009513 YP_004051553.1 CDS Calni_1482 NC_014758.1 1545013 1545396 R COGs: COG0100 Ribosomal protein S11; InterPro IPR018102: IPR001971: IPR019981; KEGG: ddf:DEFDS_1747 30S ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 complement(1545013..1545396) Calditerrivibrio nitroreducens DSM 19672 10009514 YP_004051554.1 CDS Calni_1483 NC_014758.1 1545415 1545783 R COGs: COG0099 Ribosomal protein S13; InterPro IPR001892: IPR018269: IPR019980; KEGG: ddf:DEFDS_1748 30S ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 complement(1545415..1545783) Calditerrivibrio nitroreducens DSM 19672 10009515 YP_004051555.1 CDS Calni_1484 NC_014758.1 1545795 1545908 R InterPro IPR000473; KEGG: ddf:DEFDS_1749 50S ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; manually curated; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 complement(1545795..1545908) Calditerrivibrio nitroreducens DSM 19672 10009516 YP_004051556.1 CDS Calni_1485 NC_014758.1 1545924 1546145 R COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR006196: IPR004368; KEGG: dap:Dacet_0394 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: Translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; bacterial translation initiation factor 1 (bif-1) complement(1545924..1546145) Calditerrivibrio nitroreducens DSM 19672 10009517 YP_004051557.1 CDS Calni_1486 NC_014758.1 1546155 1546898 R COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467: IPR001714: IPR000994; KEGG: ddf:DEFDS_1751 methionine aminopeptidase; PFAM: peptidase M24; SPTR: Methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase complement(1546155..1546898) Calditerrivibrio nitroreducens DSM 19672 10009518 YP_004051558.1 CDS Calni_1487 NC_014758.1 1546898 1547545 R COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850: IPR007862: IPR006259; KEGG: ddf:DEFDS_1752 adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein; SPTR: Adenylate kinase; TIGRFAM: adenylate kinase; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase complement(1546898..1547545) Calditerrivibrio nitroreducens DSM 19672 10009519 YP_004051559.1 CDS Calni_1488 NC_014758.1 1547539 1548855 R COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: ddf:DEFDS_1753 preprotein translocase subunit Y; PFAM: SecY protein; SPTR: Preprotein translocase subunit Y; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; protein translocase subunit SecY complement(1547539..1548855) Calditerrivibrio nitroreducens DSM 19672 10009520 YP_004051560.1 CDS Calni_1489 NC_014758.1 1548859 1549308 R COGs: COG0200 Ribosomal protein L15; InterPro IPR001196: IPR005749; KEGG: ddf:DEFDS_1754 50S ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 complement(1548859..1549308) Calditerrivibrio nitroreducens DSM 19672 10009521 YP_004051561.1 CDS Calni_1490 NC_014758.1 1549312 1549815 R COGs: COG0098 Ribosomal protein S5; InterPro IPR013810: IPR018192: IPR005324: IPR005712; KEGG: ddf:DEFDS_1755 30S ribosomal protein S5; PFAM: Ribosomal protein S5; ribosomal protein S5 domain protein; SPTR: 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 complement(1549312..1549815) Calditerrivibrio nitroreducens DSM 19672 10009522 YP_004051562.1 CDS Calni_1491 NC_014758.1 1549827 1550186 R COGs: COG0256 Ribosomal protein L18; InterPro IPR005484: IPR004389; KEGG: ddf:DEFDS_1756 50S ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; SPTR: 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 complement(1549827..1550186) Calditerrivibrio nitroreducens DSM 19672 10009523 YP_004051563.1 CDS Calni_1492 NC_014758.1 1550206 1550745 R COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR002358: IPR019906: IPR020040: IPR000702; KEGG: ddf:DEFDS_1757 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 complement(1550206..1550745) Calditerrivibrio nitroreducens DSM 19672 10009524 YP_004051564.1 CDS Calni_1493 NC_014758.1 1550757 1551149 R COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: ddf:DEFDS_1758 30S ribosomal protein S8; PFAM: ribosomal protein S8; SPTR: 30S ribosomal protein S8; PFAM: Ribosomal protein S8; 30S ribosomal protein S8 complement(1550757..1551149) Calditerrivibrio nitroreducens DSM 19672 10009525 YP_004051565.1 CDS Calni_1494 NC_014758.1 1551198 1551383 R COGs: COG0199 Ribosomal protein S14; InterPro IPR018271: IPR001209; KEGG: ddf:DEFDS_1759 30S ribosomal protein S14; PFAM: ribosomal protein S14; SPTR: 30S ribosomal protein S14; manually curated; PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 complement(1551198..1551383) Calditerrivibrio nitroreducens DSM 19672 10009526 YP_004051566.1 CDS Calni_1495 NC_014758.1 1551393 1551935 R COGs: COG0094 Ribosomal protein L5; InterPro IPR020929: IPR002132; KEGG: ddf:DEFDS_1760 50S ribosomal protein L5; SPTR: 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 complement(1551393..1551935) Calditerrivibrio nitroreducens DSM 19672 10009527 YP_004051567.1 CDS Calni_1496 NC_014758.1 1551947 1552276 R COGs: COG0198 Ribosomal protein L24; InterPro IPR003256; KEGG: ddf:DEFDS_1761 50S ribosomal protein L24; SPTR: 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 complement(1551947..1552276) Calditerrivibrio nitroreducens DSM 19672 10009528 YP_004051568.1 CDS Calni_1497 NC_014758.1 1552286 1552654 R COGs: COG0093 Ribosomal protein L14; InterPro IPR019972: IPR000218: IPR005745; KEGG: ddf:DEFDS_1762 50S ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 complement(1552286..1552654) Calditerrivibrio nitroreducens DSM 19672 10009529 YP_004051569.1 CDS Calni_1498 NC_014758.1 1552675 1552938 R COGs: COG0186 Ribosomal protein S17; InterPro IPR019979: IPR000266: IPR019984; KEGG: ddf:DEFDS_1763 30S ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 complement(1552675..1552938) Calditerrivibrio nitroreducens DSM 19672 10009530 YP_004051570.1 CDS Calni_1499 NC_014758.1 1552940 1553134 R InterPro IPR001854; KEGG: ddf:DEFDS_1764 50S ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 complement(1552940..1553134) Calditerrivibrio nitroreducens DSM 19672 10009531 YP_004051571.1 CDS Calni_1500 NC_014758.1 1553134 1553568 R COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR000114: IPR016180; KEGG: ddf:DEFDS_1765 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 complement(1553134..1553568) Calditerrivibrio nitroreducens DSM 19672 10009532 YP_004051572.1 CDS Calni_1501 NC_014758.1 1553570 1554229 R COGs: COG0092 Ribosomal protein S3; InterPro IPR004044: IPR018280: IPR008282: IPR001351: IPR 005704: IPR004087; KEGG: dap:Dacet_0378 30S ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 complement(1553570..1554229) Calditerrivibrio nitroreducens DSM 19672 10009533 YP_004051573.1 CDS Calni_1502 NC_014758.1 1554245 1554577 R COGs: COG0091 Ribosomal protein L22; InterPro IPR018260: IPR001063: IPR005727; KEGG: ddf:DEFDS_1767 50S ribosomal protein L22; PFAM: ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 complement(1554245..1554577) Calditerrivibrio nitroreducens DSM 19672 10009534 YP_004051574.1 CDS Calni_1503 NC_014758.1 1554594 1554872 R COGs: COG0185 Ribosomal protein S19; InterPro IPR020934: IPR002222: IPR005732; KEGG: dap:Dacet_0376 30S ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 complement(1554594..1554872) Calditerrivibrio nitroreducens DSM 19672 10009535 YP_004051575.1 CDS Calni_1504 NC_014758.1 1554884 1555708 R COGs: COG0090 Ribosomal protein L2; InterPro IPR002171: IPR005880; KEGG: ddf:DEFDS_1769 50S ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 complement(1554884..1555708) Calditerrivibrio nitroreducens DSM 19672 10009536 YP_004051576.1 CDS Calni_1505 NC_014758.1 1555722 1556003 R COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: ddf:DEFDS_1770 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; PFAM: Ribosomal protein L23; 50S ribosomal protein L23 complement(1555722..1556003) Calditerrivibrio nitroreducens DSM 19672 10009537 YP_004051577.1 CDS Calni_1506 NC_014758.1 1556003 1556626 R COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: ddf:DEFDS_1771 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family; 50S ribosomal protein L4/l1e complement(1556003..1556626) Calditerrivibrio nitroreducens DSM 19672 10009538 YP_004051578.1 CDS Calni_1507 NC_014758.1 1556636 1557274 R COGs: COG0087 Ribosomal protein L3; InterPro IPR019926: IPR000597: IPR019927; KEGG: ddf:DEFDS_1772 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 complement(1556636..1557274) Calditerrivibrio nitroreducens DSM 19672 10009539 YP_004051579.1 CDS Calni_1508 NC_014758.1 1557287 1557595 R COGs: COG0051 Ribosomal protein S10; InterPro IPR018268: IPR001848: IPR005731; KEGG: dap:Dacet_0371 30S ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 complement(1557287..1557595) Calditerrivibrio nitroreducens DSM 19672 10009540 YP_004051580.1 CDS Calni_1509 NC_014758.1 1557608 1558798 R COGs: COG0050 GTPase - translation elongation factors; InterPro IPR000795: IPR004161: IPR004160: IPR004541: IPR 005225; KEGG: ddf:DEFDS_1787 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; SPTR: Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor 1a (ef-1a/ef-tu) complement(1557608..1558798) Calditerrivibrio nitroreducens DSM 19672 10009541 YP_004051581.1 CDS Calni_1510 NC_014758.1 1558821 1560893 R COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR000795: IPR004161: IPR005517: IPR000640: IPR 004540: IPR005225; KEGG: ddf:DEFDS_1775 translation elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (ef-2/ef-g) complement(1558821..1560893) Calditerrivibrio nitroreducens DSM 19672 10009542 YP_004051582.1 CDS Calni_1511 NC_014758.1 1560906 1561376 R COGs: COG0049 Ribosomal protein S7; InterPro IPR000235: IPR005717; KEGG: ddf:DEFDS_1776 30S ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 complement(1560906..1561376) Calditerrivibrio nitroreducens DSM 19672 10009543 YP_004051583.1 CDS Calni_1512 NC_014758.1 1561390 1561764 R COGs: COG0048 Ribosomal protein S12; InterPro IPR006032: IPR005679; KEGG: str:Sterm_4000 ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12p complement(1561390..1561764) Calditerrivibrio nitroreducens DSM 19672 10009544 YP_004051584.1 CDS Calni_1513 NC_014758.1 1561902 1562234 R InterPro IPR011031; KEGG: ddf:DEFDS_2031 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; manually curated; multiheme c-type cytochrome complement(1561902..1562234) Calditerrivibrio nitroreducens DSM 19672 10009545 YP_004051585.1 CDS Calni_1514 NC_014758.1 1562162 1563259 R COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197: IPR010723: IPR004559: IPR006638; KEGG: ddf:DEFDS_2032 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen iii oxidase complement(1562162..1563259) Calditerrivibrio nitroreducens DSM 19672 10009546 YP_004051586.1 CDS Calni_1515 NC_014758.1 1563263 1563673 R COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR000847; KEGG: tye:THEYE_A0050 molybdenum transport regulatory protein ModE; PFAM: regulatory protein LysR; SPTR: Molybdenum transport regulatory protein ModE; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; ModE family transcriptional regulator complement(1563263..1563673) Calditerrivibrio nitroreducens DSM 19672 10009547 YP_004051587.1 CDS Calni_1516 NC_014758.1 1563663 1564625 R COGs: COG0502 Biotin synthase; InterPro IPR007197: IPR010722: IPR002684: IPR006638; KEGG: ddf:DEFDS_1300 biotin synthetase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthetase; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; biotin synthase complement(1563663..1564625) Calditerrivibrio nitroreducens DSM 19672 10009548 YP_004051588.1 CDS Calni_1517 NC_014758.1 1564634 1565956 R COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR013093: IPR004491: IPR003593; KEGG: ddf:DEFDS_2156 ATP-dependent protease HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; heat shock protein hslvu, atpase subunit hslu complement(1564634..1565956) Calditerrivibrio nitroreducens DSM 19672 10009549 YP_004051589.1 CDS Calni_1518 NC_014758.1 1565956 1566483 R COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: dap:Dacet_0324 20S proteasome A and B subunits; PFAM: 20S proteasome A and B subunits; SPTR: ATP-dependent protease subunit HslV; PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; peptidase subunit HslV complement(1565956..1566483) Calditerrivibrio nitroreducens DSM 19672 10009550 YP_004051590.1 CDS Calni_1519 NC_014758.1 1566907 1567986 R KEGG: ddf:DEFDS_1170 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1566907..1567986) Calditerrivibrio nitroreducens DSM 19672 10009553 YP_004051591.1 CDS Calni_1520 NC_014758.1 1567988 1569262 R COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR003088: IPR009056; KEGG: ddf:DEFDS_1171 cytochrome c family protein; PFAM: cytochrome c class I; SPTR: Cytochrome c family protein; PFAM: Bacterial Cytochrome Ubiquinol Oxidase; cytochrome c class i complement(1567988..1569262) Calditerrivibrio nitroreducens DSM 19672 10009554 YP_004051592.1 CDS Calni_1521 NC_014758.1 1569437 1570294 R COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR017871: IPR003439: IPR003593; KEGG: saf:SULAZ_0044 spermidine/putrescine import ATP-binding protein PotA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Spermidine/putrescine import ATP-binding protein PotA; PFAM: ABC transporter; ABC transporter complement(1569437..1570294) Calditerrivibrio nitroreducens DSM 19672 10009555 YP_004051593.1 CDS Calni_1522 NC_014758.1 1570297 1570983 R COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515: IPR011867; KEGG: saf:SULAZ_0046 molybdate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Molybdate ABC transporter, permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdate ABC transporter inner membrane subunit complement(1570297..1570983) Calditerrivibrio nitroreducens DSM 19672 10009556 YP_004051594.1 CDS Calni_1523 NC_014758.1 1570985 1571374 R KEGG: saf:SULAZ_0047 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1570985..1571374) Calditerrivibrio nitroreducens DSM 19672 10009557 YP_004051595.1 CDS Calni_1524 NC_014758.1 1571391 1572182 R InterPro IPR002781; KEGG: cyh:Cyan8802_4492 protein of unknown function DUF81; PFAM: protein of unknown function DUF81; SPTR: uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein complement(1571391..1572182) Calditerrivibrio nitroreducens DSM 19672 10009558 YP_004051596.1 CDS Calni_1525 NC_014758.1 1572184 1573023 R COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638: IPR006242; KEGG: mvn:Mevan_0544 ModD protein; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: ModD protein; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; molybdenum utilization protein ModD; modd protein complement(1572184..1573023) Calditerrivibrio nitroreducens DSM 19672 10009559 YP_004051597.1 CDS Calni_1526 NC_014758.1 1573023 1573799 R COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR006059: IPR005950; KEGG: saf:SULAZ_0049 molybdate ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Molybdate ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(1573023..1573799) Calditerrivibrio nitroreducens DSM 19672 10009560 YP_004051598.1 CDS Calni_1527 NC_014758.1 1573887 1577939 R COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterPro IPR007080: IPR000722: IPR007066: IPR007083: IPR 007081: IPR012754: IPR006592; KEGG: ddf:DEFDS_1778 DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' complement(1573887..1577939) Calditerrivibrio nitroreducens DSM 19672 10009561 YP_004051599.1 CDS Calni_1528 NC_014758.1 1577957 1581907 R COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterPro IPR007121: IPR007644: IPR007642: IPR007645: IPR 019462: IPR007120: IPR007641: IPR010243; KEGG: ddf:DEFDS_1779 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta complement(1577957..1581907) Calditerrivibrio nitroreducens DSM 19672 10009562 YP_004051600.1 CDS Calni_1529 NC_014758.1 1581998 1582381 R COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR013823: IPR000206; KEGG: ddf:DEFDS_1780 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L12 complement(1581998..1582381) Calditerrivibrio nitroreducens DSM 19672 10009563 YP_004051601.1 CDS Calni_1530 NC_014758.1 1582397 1582912 R COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: ddf:DEFDS_1781 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: 50S ribosomal protein L10; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 complement(1582397..1582912) Calditerrivibrio nitroreducens DSM 19672 10009564 YP_004051602.1 CDS Calni_1531 NC_014758.1 1583010 1583711 R COGs: COG0081 Ribosomal protein L1; InterPro IPR002143: IPR005878; KEGG: ddf:DEFDS_1782 50S ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 complement(1583010..1583711) Calditerrivibrio nitroreducens DSM 19672 10009565 YP_004051603.1 CDS Calni_1532 NC_014758.1 1583725 1584150 R COGs: COG0080 Ribosomal protein L11; InterPro IPR020785: IPR020784: IPR020783: IPR006519: IPR 000911; KEGG: ddf:DEFDS_1783 50S ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 complement(1583725..1584150) Calditerrivibrio nitroreducens DSM 19672 10009566 YP_004051604.1 CDS Calni_1533 NC_014758.1 1584164 1584691 R COGs: COG0250 Transcription antiterminator; InterPro IPR015869: IPR006645: IPR005824: IPR001062; KEGG: ddf:DEFDS_1784 transcriptional antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; SMART: NGN domain-containing protein; KOW domain protein; SPTR: Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein nusg complement(1584164..1584691) Calditerrivibrio nitroreducens DSM 19672 10009567 YP_004051605.1 CDS Calni_1534 NC_014758.1 1584695 1584877 R InterPro IPR001901: IPR005807; KEGG: ddf:DEFDS_1785 preprotein translocase subunit E; PFAM: protein secE/sec61-gamma protein; SPTR: Preprotein translocase subunit E; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; preprotein translocase subunit SecE complement(1584695..1584877) Calditerrivibrio nitroreducens DSM 19672 10009568 YP_004051606.1 CDS Calni_1535 NC_014758.1 1584979 1585128 R InterPro IPR013838: IPR018264: IPR001705; KEGG: dap:Dacet_0358 50S ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 complement(1584979..1585128) Calditerrivibrio nitroreducens DSM 19672 10009570 YP_004051607.1 CDS Calni_1536 NC_014758.1 1585141 1586331 R COGs: COG0050 GTPase - translation elongation factors; InterPro IPR000795: IPR004161: IPR004160: IPR004541: IPR 005225; KEGG: ddf:DEFDS_1787 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; SPTR: Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor 1a (ef-1a/ef-tu) complement(1585141..1586331) Calditerrivibrio nitroreducens DSM 19672 10009571 YP_004051608.1 CDS Calni_1537 NC_014758.1 1586575 1586946 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_0145 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain; response regulator receiver protein complement(1586575..1586946) Calditerrivibrio nitroreducens DSM 19672 10009573 YP_004051609.1 CDS Calni_1538 NC_014758.1 1586952 1587452 R COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR001163: IPR005001; KEGG: ddf:DEFDS_0146 small nuclear ribonucleoprotein; PFAM: Like-Sm ribonucleoprotein core; SPTR: Small nuclear ribonucleoprotein; TIGRFAM: RNA chaperone Hfq; PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA chaperone hfq complement(1586952..1587452) Calditerrivibrio nitroreducens DSM 19672 10009574 YP_004051610.1 CDS Calni_1539 NC_014758.1 1587513 1587806 R InterPro IPR001845; KEGG: ddf:DEFDS_0179 AsrR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, AsrR family; PFAM: Bacterial regulatory protein, arsR family; ArsR family transcriptional regulator complement(1587513..1587806) Calditerrivibrio nitroreducens DSM 19672 10009575 YP_004051611.1 CDS Calni_1540 NC_014758.1 1587817 1588605 R COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR020904: IPR002198: IPR002347; KEGG: bfs:BF1669 short-chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr complement(1587817..1588605) Calditerrivibrio nitroreducens DSM 19672 10009576 YP_004051612.1 CDS Calni_1541 NC_014758.1 1588624 1588887 R COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; InterPro IPR006135; KEGG: ddf:DEFDS_2014 flagellar biosynthesis protein FlhB; PFAM: type III secretion exporter; SPTR: Flagellar biosynthesis protein FlhB; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein; type III secretion exporter complement(1588624..1588887) Calditerrivibrio nitroreducens DSM 19672 10009577 YP_004051613.1 CDS Calni_1542 NC_014758.1 1588880 1590151 R COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814; KEGG: dap:Dacet_2807 aminotransferase class-III; PFAM: aminotransferase class-III; SPTR: Aminotransferase class-III; PFAM: Aminotransferase class-III; aminotransferase class-iii complement(1588880..1590151) Calditerrivibrio nitroreducens DSM 19672 10009578 YP_004051614.1 CDS Calni_1543 NC_014758.1 1590148 1590921 R COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: ddf:DEFDS_2013 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF72; hypothetical protein complement(1590148..1590921) Calditerrivibrio nitroreducens DSM 19672 10009579 YP_004051615.1 CDS Calni_1544 NC_014758.1 1590995 1594327 R COGs: COG2200 FOG: EAL domain; InterPro IPR000215: IPR013767: IPR000160: IPR001633: IPR 000014: IPR000700; KEGG: eba:p1B362 sensory box protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: NMT1/THI5 like family; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase with pas/pac sensor(s) complement(1590995..1594327) Calditerrivibrio nitroreducens DSM 19672 10009580 YP_004051616.1 CDS Calni_1545 NC_014758.1 1594308 1595153 R COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; KEGG: aeh:Mlg_2684 ABC transporter, substrate-binding protein, putative; SPTR: ABC-type phosphate/phosphonate transport system periplasmic component; hypothetical protein complement(1594308..1595153) Calditerrivibrio nitroreducens DSM 19672 10009581 YP_004051617.1 CDS Calni_1546 NC_014758.1 1595299 1596114 D COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; KEGG: glo:Glov_3443 ABC transporter, substrate-binding protein, putative; SPTR: ABC transporter, substrate-binding protein, putative; ABC transporter substrate-binding protein 1595299..1596114 Calditerrivibrio nitroreducens DSM 19672 10009582 YP_004051618.1 CDS Calni_1547 NC_014758.1 1596107 1599412 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013767: IPR003661: IPR003594: IPR001789: IPR 008207: IPR005467: IPR000014: IPR004358; KEGG: chu:CHU_2895 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; SPTR: Sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 1596107..1599412 Calditerrivibrio nitroreducens DSM 19672 10009583 YP_004051619.1 CDS Calni_1548 NC_014758.1 1599485 1599979 D COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: alv:Alvin_1864 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: Hox1E; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; nad(p)-dependent nickel-iron dehydrogenase diaphorase component subunit hoxe 1599485..1599979 Calditerrivibrio nitroreducens DSM 19672 10009584 YP_004051620.1 CDS Calni_1549 NC_014758.1 1599969 1601579 D COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR001949: IPR011538: IPR019554: IPR019575; KEGG: sus:Acid_5018 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NADH dehydrogenase (quinone) 1599969..1601579 Calditerrivibrio nitroreducens DSM 19672 10009585 YP_004051621.1 CDS Calni_1550 NC_014758.1 1601576 1602271 D COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR017900: IPR016214: IPR001041: IPR019574: IPR 017896; KEGG: sus:Acid_5017 bidirectional hydrogenase complex protein HoxU; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; SPTR: Hydrogen dehydrogenase; PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain; nad(p)-dependent nickel-iron dehydrogenase diaphorase component subunit hoxu 1601576..1602271 Calditerrivibrio nitroreducens DSM 19672 10009586 YP_004051622.1 CDS Calni_1551 NC_014758.1 1602271 1602801 D COGs: COG1941 Coenzyme F420-reducing hydrogenase gamma subunit; InterPro IPR006137; KEGG: dps:DP2211 hydrogenase, small chain; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: Probable hydrogenase, small chain; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; NADH ubiquinone oxidoreductase 20 kda subunit 1602271..1602801 Calditerrivibrio nitroreducens DSM 19672 10009587 YP_004051623.1 CDS Calni_1552 NC_014758.1 1602809 1604221 D COGs: COG3259 Coenzyme F420-reducing hydrogenase alpha subunit; InterPro IPR018194: IPR001501; KEGG: sus:Acid_5015 nickel-dependent hydrogenase, large subunit; PFAM: nickel-dependent hydrogenase large subunit; SPTR: Nickel-dependent hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase; nad(p)-dependent nickel-iron dehydrogenase catalytic subunit 1602809..1604221 Calditerrivibrio nitroreducens DSM 19672 10009588 YP_004051624.1 CDS Calni_1553 NC_014758.1 1604200 1604652 D InterPro IPR000671; KEGG: afw:Anae109_2794 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: hydrogenase maturation protease; manually curated; TIGRFAM: hydrogenase maturation protease; hydrogenase maturation protease 1604200..1604652 Calditerrivibrio nitroreducens DSM 19672 10009589 YP_004051625.1 CDS Calni_1554 NC_014758.1 1604641 1605306 R KEGG: ddf:DEFDS_1084 hypothetical protein; SPTR: uncharacterized protein; PFAM: Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; hypothetical protein complement(1604641..1605306) Calditerrivibrio nitroreducens DSM 19672 10009590 YP_004051626.1 CDS Calni_1555 NC_014758.1 1605317 1606273 R COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523: IPR004488; KEGG: pmx:PERMA_1612 magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; SPTR: Magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); magnesium and cobalt transport protein cora complement(1605317..1606273) Calditerrivibrio nitroreducens DSM 19672 10009591 YP_004051627.1 CDS Calni_1556 NC_014758.1 1606400 1606738 D InterPro IPR011031; KEGG: ddf:DEFDS_0821 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; PFAM: Class III cytochrome C family; multiheme c-type cytochrome 1606400..1606738 Calditerrivibrio nitroreducens DSM 19672 10009592 YP_004051628.1 CDS Calni_1557 NC_014758.1 1606760 1607248 R KEGG: ddf:DEFDS_0820 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1606760..1607248) Calditerrivibrio nitroreducens DSM 19672 10009593 YP_004051629.1 CDS Calni_1558 NC_014758.1 1607238 1608614 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR002197: IPR003593: IPR 020441; KEGG: ddf:DEFDS_1012 two-component, sigma54 specific, transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two-component, sigma54 specific, transcriptional regulator; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator complement(1607238..1608614) Calditerrivibrio nitroreducens DSM 19672 10009594 YP_004051630.1 CDS Calni_1559 NC_014758.1 1608595 1610748 R COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003660: IPR003661: IPR003594: IPR005467: IPR 004358; KEGG: dap:Dacet_1368 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(1608595..1610748) Calditerrivibrio nitroreducens DSM 19672 10009595 YP_004051631.1 CDS Calni_1560 NC_014758.1 1610745 1611560 R COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); KEGG: ddf:DEFDS_1010 general secretion pathway protein A; SPTR: General secretion pathway protein A; PFAM: Archaeal ATPase; general secretion pathway protein a complement(1610745..1611560) Calditerrivibrio nitroreducens DSM 19672 10009596 YP_004051632.1 CDS Calni_1561 NC_014758.1 1611570 1613768 R InterPro IPR001440: IPR019734: IPR013026; KEGG: ddf:DEFDS_1009 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: uncharacterized protein; tetratricopeptide tpr_1 repeat-containing protein complement(1611570..1613768) Calditerrivibrio nitroreducens DSM 19672 10009597 YP_004051633.1 CDS Calni_1562 NC_014758.1 1613765 1614478 R COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: ddf:DEFDS_1008 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: uncharacterized protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(1613765..1614478) Calditerrivibrio nitroreducens DSM 19672 10009598 YP_004051634.1 CDS Calni_1563 NC_014758.1 1614453 1614812 R COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: ddf:DEFDS_1007 6-pyruvoyl-tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: 6-pyruvoyl-tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; preq(0) biosynthesis protein qued complement(1614453..1614812) Calditerrivibrio nitroreducens DSM 19672 10009599 YP_004051635.1 CDS Calni_1564 NC_014758.1 1614794 1615495 R COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR018496: IPR002942: IPR006145: IPR000748; KEGG: ddf:DEFDS_1006 ribosomal small subunit pseudouridine synthase A; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; RNA-binding s4 domain-containing protein complement(1614794..1615495) Calditerrivibrio nitroreducens DSM 19672 10009600 YP_004051636.1 CDS Calni_1565 NC_014758.1 1615544 1616056 R COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234; KEGG: dap:Dacet_1365 chromosome segregation and condensation protein, ScpB; PFAM: chromosome segregation and condensation protein ScpB; SPTR: Chromosome segregation and condensation protein, ScpB; TIGRFAM: segregation and condensation protein B; PFAM: transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; chromosome segregation and condensation protein, scpb complement(1615544..1616056) Calditerrivibrio nitroreducens DSM 19672 10009601 YP_004051637.1 CDS Calni_1566 NC_014758.1 1616049 1616750 R COGs: COG1354 conserved hypothetical protein; InterPro IPR003768; KEGG: ddf:DEFDS_1004 chromosome segregation and condensation protein ScpA; PFAM: chromosome segregation and condensation protein ScpA; SPTR: Chromosome segregation and condensation protein ScpA; PFAM: ScpA/B protein; chromosome segregation and condensation protein scpa complement(1616049..1616750) Calditerrivibrio nitroreducens DSM 19672 10009602 YP_004051638.1 CDS Calni_1567 NC_014758.1 1616752 1617732 R COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR001412: IPR002305: IPR002306; KEGG: ddf:DEFDS_1003 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(1616752..1617732) Calditerrivibrio nitroreducens DSM 19672 10009603 YP_004051639.1 CDS Calni_1568 NC_014758.1 1617740 1618369 R COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: ddf:DEFDS_1002 peptidase M50 family; PFAM: peptidase M50; SPTR: Peptidase, M50 family; PFAM: Peptidase family M50; peptidase m50 complement(1617740..1618369) Calditerrivibrio nitroreducens DSM 19672 10009604 YP_004051640.1 CDS Calni_1569 NC_014758.1 1618541 1619221 D COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: ddf:DEFDS_0404 phosphate transport system regulator; PFAM: PhoU family protein; SPTR: Phosphate transport system regulator; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate uptake regulator, phou 1618541..1619221 Calditerrivibrio nitroreducens DSM 19672 10009605 YP_004051641.1 CDS Calni_1570 NC_014758.1 1619214 1619882 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: ddf:DEFDS_0405 two-component system, OmpR family, response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 1619214..1619882 Calditerrivibrio nitroreducens DSM 19672 10009606 YP_004051642.1 CDS Calni_1571 NC_014758.1 1619886 1621562 D COGs: COG5002 Signal transduction histidine kinase; InterPro IPR013767: IPR003661: IPR003594: IPR005467: IPR 000014: IPR004358; KEGG: dap:Dacet_1228 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; multi-sensor signal transduction histidine kinase 1619886..1621562 Calditerrivibrio nitroreducens DSM 19672 10009607 YP_004051643.1 CDS Calni_1572 NC_014758.1 1621762 1622337 R KEGG: shn:Shewana3_2328 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1621762..1622337) Calditerrivibrio nitroreducens DSM 19672 10009608 YP_004051644.1 CDS Calni_1573 NC_014758.1 1622358 1623182 R COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR017871: IPR003439: IPR015850: IPR005670: IPR 003593; KEGG: psl:Psta_2976 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ATP-binding component of ABC phosphate transporter; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate ABC transporter ATP-binding protein, phot family complement(1622358..1623182) Calditerrivibrio nitroreducens DSM 19672 10009609 YP_004051645.1 CDS Calni_1574 NC_014758.1 1623193 1624929 R COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR005672; KEGG: avn:Avin_48580 phosphate ABC transporter, permease protein PstA; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter membrane protein PstA complement(1623193..1624929) Calditerrivibrio nitroreducens DSM 19672 10009610 YP_004051646.1 CDS Calni_1575 NC_014758.1 1624939 1627476 R COGs: COG4590 ABC-type uncharacterized transport system permease component; InterPro IPR000515; KEGG: nhl:Nhal_2290 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1624939..1627476) Calditerrivibrio nitroreducens DSM 19672 10009611 YP_004051647.1 CDS Calni_1576 NC_014758.1 1627529 1628497 R COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR011862; KEGG: glo:Glov_0618 phosphate binding protein; SPTR: Strongly similar to phosphate binding protein of ABC-type phosphate transport system; TIGRFAM: phosphate binding protein; TIGRFAM: phosphate binding protein; phosphate ABC transporter substrate-binding protein, phot family complement(1627529..1628497) Calditerrivibrio nitroreducens DSM 19672 10009612 YP_004051648.1 CDS Calni_1577 NC_014758.1 1628590 1628850 R COGs: COG1872 conserved hypothetical protein; InterPro IPR003746; KEGG: ddf:DEFDS_0212 hypothetical protein; PFAM: protein of unknown function DUF167; SPTR: UPF0235 protein DEFDS_0212; PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: conserved hypothetical protein TIGR00251; hypothetical protein complement(1628590..1628850) Calditerrivibrio nitroreducens DSM 19672 10009613 YP_004051649.1 CDS Calni_1578 NC_014758.1 1628926 1629927 D COGs: COG0002 acetylglutamate semialdehyde dehydrogenase; InterPro IPR000706: IPR000534: IPR012280; KEGG: ddf:DEFDS_0210 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 1628926..1629927 Calditerrivibrio nitroreducens DSM 19672 10009614 YP_004051650.1 CDS Calni_1579 NC_014758.1 1629935 1631143 D COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813; KEGG: ddf:DEFDS_2004 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: Arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1629935..1631143 Calditerrivibrio nitroreducens DSM 19672 10009615 YP_004051651.1 CDS Calni_1580 NC_014758.1 1631143 1631919 D COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: ddf:DEFDS_1479 ABC transporter permease; PFAM: protein of unknown function DUF140; SPTR: ABC transporter, permease; PFAM: Domain of unknown function DUF140; hypothetical protein 1631143..1631919 Calditerrivibrio nitroreducens DSM 19672 10009616 YP_004051652.1 CDS Calni_1581 NC_014758.1 1631916 1632425 D KEGG: ddf:DEFDS_1478 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1631916..1632425 Calditerrivibrio nitroreducens DSM 19672 10009617 YP_004051653.1 CDS Calni_1582 NC_014758.1 1632398 1633393 D COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: ddf:DEFDS_1477 hypothetical protein; PFAM: Mammalian cell entry related domain protein; SPTR: uncharacterized protein; PFAM: mce related protein; mammalian cell entry related domain-containing protein 1632398..1633393 Calditerrivibrio nitroreducens DSM 19672 10009618 YP_004051654.1 CDS Calni_1583 NC_014758.1 1633404 1634075 D KEGG: dap:Dacet_1689 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1633404..1634075 Calditerrivibrio nitroreducens DSM 19672 10009619 YP_004051655.1 CDS Calni_1584 NC_014758.1 1634154 1634492 D COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002332: IPR017918: IPR002187; KEGG: dap:Dacet_1688 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein p-ii 1634154..1634492 Calditerrivibrio nitroreducens DSM 19672 10009620 YP_004051656.1 CDS Calni_1585 NC_014758.1 1634518 1635930 D COGs: COG0174 Glutamine synthetase; InterPro IPR008147: IPR008146: IPR001637: IPR004809; KEGG: ddf:DEFDS_1474 glutamine synthetase type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; l-glutamine synthetase 1634518..1635930 Calditerrivibrio nitroreducens DSM 19672 10009621 YP_004051657.1 CDS Calni_1586 NC_014758.1 1636016 1636432 R COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546: IPR001469; KEGG: ddf:DEFDS_1885 F0F1-type ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: ATP synthase epsilon chain; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase F1 subunit epsilon complement(1636016..1636432) Calditerrivibrio nitroreducens DSM 19672 10009622 YP_004051658.1 CDS Calni_1587 NC_014758.1 1636435 1637841 R COGs: COG0055 F0F1-type ATP synthase beta subunit; InterPro IPR020003: IPR004100: IPR000194: IPR000793: IPR 005722: IPR003593; KEGG: ddf:DEFDS_1886 F0F1-type ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; SPTR: ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase F1 subunit beta complement(1636435..1637841) Calditerrivibrio nitroreducens DSM 19672 10009623 YP_004051659.1 CDS Calni_1588 NC_014758.1 1637867 1638724 R COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: ddf:DEFDS_1887 F0F1-type ATP synthase subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase F1 subunit gamma complement(1637867..1638724) Calditerrivibrio nitroreducens DSM 19672 10009624 YP_004051660.1 CDS Calni_1589 NC_014758.1 1638738 1640246 R COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterPro IPR020003: IPR004100: IPR000194: IPR000793: IPR 005294; KEGG: ddf:DEFDS_1888 F0F1-type ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SPTR: ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase F1 subunit alpha complement(1638738..1640246) Calditerrivibrio nitroreducens DSM 19672 10009625 YP_004051661.1 CDS Calni_1590 NC_014758.1 1640272 1640814 R COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); InterPro IPR000711; KEGG: dap:Dacet_0881 ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase f1 subunit delta complement(1640272..1640814) Calditerrivibrio nitroreducens DSM 19672 10009626 YP_004051662.1 CDS Calni_1591 NC_014758.1 1640811 1641371 R COGs: COG0711 F0F1-type ATP synthase subunit b; InterPro IPR002146; KEGG: ddf:DEFDS_1890 F0F1-type ATP synthase subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: F0F1-type ATP synthase, B subunit; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; h+transporting two-sector atpase b/b' subunit complement(1640811..1641371) Calditerrivibrio nitroreducens DSM 19672 10009627 YP_004051663.1 CDS Calni_1592 NC_014758.1 1641379 1641804 R InterPro IPR002146; KEGG: ddf:DEFDS_1891 F0F1-type ATP synthase B' subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: F0F1-type ATP synthase, B' subunit; PFAM: ATP synthase B/B' CF(0); h+transporting two-sector atpase b/b' subunit complement(1641379..1641804) Calditerrivibrio nitroreducens DSM 19672 10009628 YP_004051664.1 CDS Calni_1593 NC_014758.1 1641972 1643138 R COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR015911: IPR001576; KEGG: ddf:DEFDS_1892 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase complement(1641972..1643138) Calditerrivibrio nitroreducens DSM 19672 10009629 YP_004051665.1 CDS Calni_1594 NC_014758.1 1643188 1644186 R COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020830: IPR020831: IPR020828: IPR020829: IPR 006424: IPR020832; KEGG: ddf:DEFDS_1893 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase complement(1643188..1644186) Calditerrivibrio nitroreducens DSM 19672 10009630 YP_004051666.1 CDS Calni_1595 NC_014758.1 1644164 1645504 R InterPro IPR000700; KEGG: ddf:DEFDS_1894 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1644164..1645504) Calditerrivibrio nitroreducens DSM 19672 10009631 YP_004051667.1 CDS Calni_1596 NC_014758.1 1645504 1646169 R COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: ddf:DEFDS_1895 hypothetical protein; PFAM: phosphoribosyltransferase; SPTR: uncharacterized protein; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; phosphoribosyltransferase complement(1645504..1646169) Calditerrivibrio nitroreducens DSM 19672 10009632 YP_004051668.1 CDS Calni_1597 NC_014758.1 1646329 1646610 R COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR021127; KEGG: mar:MAE_30870 CRISPR-associated Cas2 family protein; SPTR: CRISPR-associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; crispr-associated protein cas2 complement(1646329..1646610) Calditerrivibrio nitroreducens DSM 19672 10009634 YP_004051669.1 CDS Calni_1598 NC_014758.1 1646729 1648489 D COGs: COG4951 conserved hypothetical protein; InterPro IPR002755: IPR013026; KEGG: sfu:Sfum_1354 hypothetical protein; PFAM: DNA primase small subunit; SPTR: uncharacterized protein; PFAM: Eukaryotic and archaeal DNA primase small subunit; DNA primase small subunit 1646729..1648489 Calditerrivibrio nitroreducens DSM 19672 10009635 YP_004051670.1 CDS Calni_1599 NC_014758.1 1648496 1649503 D COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729; KEGG: aar:Acear_0821 CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; SPTR: uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; crispr-associated protein cas1 1648496..1649503 Calditerrivibrio nitroreducens DSM 19672 10009636 YP_004051671.1 CDS Calni_1600 NC_014758.1 1649522 1650793 D KEGG: msi:Msm_1762 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1649522..1650793 Calditerrivibrio nitroreducens DSM 19672 10009637 YP_004051672.1 CDS Calni_1601 NC_014758.1 1650824 1650931 R hypothetical protein complement(1650824..1650931) Calditerrivibrio nitroreducens DSM 19672 10009638 YP_004051673.1 CDS Calni_1602 NC_014758.1 1651028 1651387 R KEGG: wbr:WGLp311 hypothetical protein; SPTR: FolC protein; hypothetical protein complement(1651028..1651387) Calditerrivibrio nitroreducens DSM 19672 10009639 YP_004051674.1 CDS Calni_1603 NC_014758.1 1651468 1651833 R KEGG: nml:Namu_1187 glucosamine--fructose-6-phosphate aminotransferase; SPTR: Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; hypothetical protein complement(1651468..1651833) Calditerrivibrio nitroreducens DSM 19672 10009640 YP_004051675.1 CDS Calni_1604 NC_014758.1 1654933 1656441 R KEGG: saf:SULAZ_1047 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1654933..1656441) Calditerrivibrio nitroreducens DSM 19672 10009641 YP_004051676.1 CDS Calni_1605 NC_014758.1 1656442 1657296 R KEGG: saf:SULAZ_1046 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1656442..1657296) Calditerrivibrio nitroreducens DSM 19672 10009642 YP_004051677.1 CDS Calni_1606 NC_014758.1 1657305 1657940 R KEGG: taf:THA_319 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1657305..1657940) Calditerrivibrio nitroreducens DSM 19672 10009643 YP_004051678.1 CDS Calni_1607 NC_014758.1 1657933 1658484 R KEGG: pmh:P9215_17991 alanine racemase; SPTR: Alanine racemase; hypothetical protein complement(1657933..1658484) Calditerrivibrio nitroreducens DSM 19672 10009644 YP_004051679.1 CDS Calni_1608 NC_014758.1 1658661 1659050 R KEGG: csc:Csac_0088 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1658661..1659050) Calditerrivibrio nitroreducens DSM 19672 10009645 YP_004051680.1 CDS Calni_1609 NC_014758.1 1659056 1660195 R COGs: COG1332 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537: IPR010173; KEGG: tye:THEYE_A0637 CRISPR-associated RAMP protein, Csm5 family; PFAM: protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Csm5 family; TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; crispr-associated ramp protein, csm5 family complement(1659056..1660195) Calditerrivibrio nitroreducens DSM 19672 10009646 YP_004051681.1 CDS Calni_1610 NC_014758.1 1660192 1661124 R KEGG: tye:THEYE_A0636 CRISPR-associated protein, Csm4 family; SPTR: CRISPR-associated protein, Csm4 family; TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; crispr-associated protein, csm4 family complement(1660192..1661124) Calditerrivibrio nitroreducens DSM 19672 10009647 YP_004051682.1 CDS Calni_1611 NC_014758.1 1661132 1661809 R COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537: IPR013412; KEGG: neu:NE0121 hypothetical protein; PFAM: protein of unknown function DUF324; SPTR: uncharacterized protein; TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; crispr-associated protein, csm3 family complement(1661132..1661809) Calditerrivibrio nitroreducens DSM 19672 10009648 YP_004051683.1 CDS Calni_1612 NC_014758.1 1661828 1662295 R InterPro IPR010149; KEGG: msu:MS1650 hypothetical protein; PFAM: CRISPR-associated protein TM1810 domain protein; SPTR: CRISPR-associated protein, Csm2 family; TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: Protein of unknown function (DUF310); TIGRFAM: CRISPR-associated protein, Csm2 family; crispr-associated protein, csm2 family complement(1661828..1662295) Calditerrivibrio nitroreducens DSM 19672 10009649 YP_004051684.1 CDS Calni_1613 NC_014758.1 1662292 1664670 R COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs); InterPro IPR000160: IPR013408; KEGG: tye:THEYE_A0633 CRISPR-associated protein, Csm1 family; SPTR: CRISPR-associated protein, Csm1 family; TIGRFAM: CRISPR-associated protein, Csm1 family; TIGRFAM: CRISPR-associated protein, Csm1 family; crispr-associated protein, csm1 family complement(1662292..1664670) Calditerrivibrio nitroreducens DSM 19672 10009650 YP_004051685.1 CDS Calni_1614 NC_014758.1 1664671 1665828 R KEGG: tye:THEYE_A0066 hypothetical protein; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1887); hypothetical protein complement(1664671..1665828) Calditerrivibrio nitroreducens DSM 19672 10009651 YP_004051686.1 CDS Calni_1615 NC_014758.1 1665825 1666730 R KEGG: tye:THEYE_A0068 CRISPR-associated protein Cas6; SPTR: CRISPR-associated protein Cas6; PFAM: Uncharacterized conserved protein (DUF2276); TIGRFAM: CRISPR-associated endoribonuclease Cas6; crispr-associated protein cas6 complement(1665825..1666730) Calditerrivibrio nitroreducens DSM 19672 10009652 YP_004051687.1 CDS Calni_1616 NC_014758.1 1666890 1667582 R COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197: IPR012840; KEGG: dap:Dacet_1927 anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; SPTR: Anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein complement(1666890..1667582) Calditerrivibrio nitroreducens DSM 19672 10009653 YP_004051688.1 CDS Calni_1618 NC_014758.1 1670133 1671677 D COGs: COG1785 Alkaline phosphatase; InterPro IPR001952: IPR006311; KEGG: tye:THEYE_A1782 alkaline phosphatase; PFAM: Alkaline phosphatase; PRIAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; PFAM: Alkaline phosphatase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; alkaline phosphatase 1670133..1671677 Calditerrivibrio nitroreducens DSM 19672 10009655 YP_004051689.1 CDS Calni_1619 NC_014758.1 1671777 1674092 D KEGG: gur:Gura_1504 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1671777..1674092 Calditerrivibrio nitroreducens DSM 19672 10009656 YP_004051690.1 CDS Calni_1620 NC_014758.1 1674074 1675066 D COGs: COG0688 Phosphatidylserine decarboxylase; InterPro IPR003817; KEGG: ppd:Ppro_2685 phosphatidylserine decarboxylase-related; PFAM: phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: Phosphatidylserine decarboxylase-related; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor; phosphatidylserine decarboxylase 1674074..1675066 Calditerrivibrio nitroreducens DSM 19672 10009657 YP_004051691.1 CDS Calni_1621 NC_014758.1 1675063 1676127 D KEGG: dat:HRM2_01910 hypothetical protein; SPTR: uncharacterized protein; PFAM: Prolipoprotein diacylglyceryl transferase; hypothetical protein 1675063..1676127 Calditerrivibrio nitroreducens DSM 19672 10009658 YP_004051692.1 CDS Calni_1622 NC_014758.1 1676110 1676772 R InterPro IPR003675; KEGG: hau:Haur_2308 abortive infection protein; PFAM: abortive infection protein; SPTR: CAAX amino terminal protease family protein; PFAM: CAAX amino terminal protease family; abortive infection protein complement(1676110..1676772) Calditerrivibrio nitroreducens DSM 19672 10009659 YP_004051693.1 CDS Calni_1623 NC_014758.1 1676954 1678135 R COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: dap:Dacet_2972 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; radical SAM domain-containing protein complement(1676954..1678135) Calditerrivibrio nitroreducens DSM 19672 10009660 YP_004051694.1 CDS Calni_1624 NC_014758.1 1678138 1680471 R COGs: COG0438 Glycosyltransferase; InterPro IPR004013: IPR001296; KEGG: dap:Dacet_2971 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; PHP domain protein; SPTR: Glycosyl transferase group 1; PFAM: PHP domain; Glycosyl transferases group 1; group 1 glycosyl transferase complement(1678138..1680471) Calditerrivibrio nitroreducens DSM 19672 10009661 YP_004051695.1 CDS Calni_1625 NC_014758.1 1680524 1681885 R COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714: IPR006596; KEGG: dap:Dacet_1703 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; SPTR: PhoH family protein; PFAM: PhoH-like protein; phoh family protein complement(1680524..1681885) Calditerrivibrio nitroreducens DSM 19672 10009662 YP_004051696.1 CDS Calni_1626 NC_014758.1 1681902 1683674 R COGs: COG2200 FOG: EAL domain; InterPro IPR001633: IPR000644: IPR000160; KEGG: dap:Dacet_2030 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase/phosphodiesterase with cbs domains complement(1681902..1683674) Calditerrivibrio nitroreducens DSM 19672 10009663 YP_004051697.1 CDS Calni_1627 NC_014758.1 1683818 1684873 D COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: tle:Tlet_1224 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; SPTR: Diguanylate phosphodiesterase; PFAM: EAL domain; diguanylate phosphodiesterase 1683818..1684873 Calditerrivibrio nitroreducens DSM 19672 10009664 YP_004051698.1 CDS Calni_1628 NC_014758.1 1684886 1685401 D KEGG: cts:Ctha_2369 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1684886..1685401 Calditerrivibrio nitroreducens DSM 19672 10009665 YP_004051699.1 CDS Calni_1629 NC_014758.1 1685448 1686446 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ddf:DEFDS_0689 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1685448..1686446 Calditerrivibrio nitroreducens DSM 19672 10009666 YP_004051700.1 CDS Calni_1630 NC_014758.1 1686776 1688419 R COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: ddf:DEFDS_1703 hypothetical protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: uncharacterized protein; PFAM: CheW-like domain; Chemotaxis phosphatase, CheZ; chew protein complement(1686776..1688419) Calditerrivibrio nitroreducens DSM 19672 10009667 YP_004051701.1 CDS Calni_1631 NC_014758.1 1688429 1689310 R COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: ddf:DEFDS_1704 flagellar biosynthesis protein FlhG; SPTR: Flagellar biosynthesis protein FlhG; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; flagellar biosynthesis protein flhg complement(1688429..1689310) Calditerrivibrio nitroreducens DSM 19672 10009668 YP_004051702.1 CDS Calni_1632 NC_014758.1 1689314 1689745 R COGs: COG3216 conserved hypothetical protein; InterPro IPR018639; KEGG: ddf:DEFDS_1705 hypothetical protein; PFAM: Protein of unknown function DUF2062; SPTR: uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2062); hypothetical protein complement(1689314..1689745) Calditerrivibrio nitroreducens DSM 19672 10009669 YP_004051703.1 CDS Calni_1633 NC_014758.1 1689742 1692084 R COGs: COG0466 ATP-dependent Lon protease; InterPro IPR008268: IPR003111: IPR003959: IPR004815: IPR 003593: IPR001984; KEGG: ddf:DEFDS_1706 ATP-dependent Lon protease; PFAM: peptidase S16 lon domain protein; ATPase AAA; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP-dependent proteinase complement(1689742..1692084) Calditerrivibrio nitroreducens DSM 19672 10009670 YP_004051704.1 CDS Calni_1634 NC_014758.1 1692084 1692518 R COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1707 small heat shock protein, class I; PFAM: heat shock protein Hsp20; SPTR: Small heat shock protein, class I; PFAM: Hsp20/alpha crystallin family; heat shock protein hsp20 complement(1692084..1692518) Calditerrivibrio nitroreducens DSM 19672 10009671 YP_004051705.1 CDS Calni_1635 NC_014758.1 1692526 1693383 R COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005835: IPR005771; KEGG: dap:Dacet_1839 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; SPTR: UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase complement(1692526..1693383) Calditerrivibrio nitroreducens DSM 19672 10009672 YP_004051706.1 CDS Calni_1636 NC_014758.1 1693424 1694221 R COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: ddf:DEFDS_1709 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: uncharacterized protein; PFAM: Memo-like protein; hypothetical protein complement(1693424..1694221) Calditerrivibrio nitroreducens DSM 19672 10009673 YP_004051707.1 CDS Calni_1637 NC_014758.1 1694203 1695003 R KEGG: dap:Dacet_1841 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1694203..1695003) Calditerrivibrio nitroreducens DSM 19672 10009674 YP_004051708.1 CDS Calni_1638 NC_014758.1 1694984 1695991 R COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR005244: IPR007197: IPR020050: IPR006638; KEGG: ddf:DEFDS_1711 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; PFAM: Radical SAM superfamily; TIGRFAM: menaquinone biosynthesis protein, SCO4494 family; radical SAM domain protein, CofH subfamily; radical SAM domain-containing protein complement(1694984..1695991) Calditerrivibrio nitroreducens DSM 19672 10009675 YP_004051709.1 CDS Calni_1639 NC_014758.1 1695988 1697397 R COGs: COG2206 HD-GYP domain; InterPro IPR001789: IPR006674: IPR006675: IPR003607; KEGG: ddf:DEFDS_1712 hypothetical protein; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; SPTR: uncharacterized protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG; response regulator receiver modulated metal dependent phosphohydrolase complement(1695988..1697397) Calditerrivibrio nitroreducens DSM 19672 10009676 YP_004051710.1 CDS Calni_1640 NC_014758.1 1697560 1698195 D COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR004254: IPR005744; KEGG: dap:Dacet_1143 channel protein, hemolysin III family; PFAM: Hly-III family protein; SPTR: Channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; channel protein, hemolysin iii family 1697560..1698195 Calditerrivibrio nitroreducens DSM 19672 10009677 YP_004051711.1 CDS Calni_1641 NC_014758.1 1698196 1699767 R COGs: COG1543 conserved hypothetical protein; InterPro IPR004300: IPR015293; KEGG: dap:Dacet_0432 glycoside hydrolase family 57; PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; SPTR: Glycoside hydrolase family 57; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57; (1->4)-alpha-d-glucan branching protein complement(1698196..1699767) Calditerrivibrio nitroreducens DSM 19672 10009678 YP_004051712.1 CDS Calni_1642 NC_014758.1 1699770 1700510 R KEGG: dap:Dacet_0433 hypothetical protein; SPTR: uncharacterized protein; PFAM: Rho termination factor, N-terminal domain; hypothetical protein complement(1699770..1700510) Calditerrivibrio nitroreducens DSM 19672 10009679 YP_004051713.1 CDS Calni_1643 NC_014758.1 1700641 1701663 R COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterPro IPR001937; KEGG: gsu:GSU3256 galactose-1-phosphate uridylyltransferase; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: Galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1; UDP-glucose--hexose-1- phosphateuridylyltransferase complement(1700641..1701663) Calditerrivibrio nitroreducens DSM 19672 10009680 YP_004051714.1 CDS Calni_1644 NC_014758.1 1701678 1703696 R COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300: IPR015178: IPR015179; KEGG: saf:SULAZ_1014 glycosyl hydrolase, family 57; PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1925; Domain of unknown function DUF1926; PRIAM: 4-alpha-glucanotransferase; SPTR: Glycosyl hydrolase, family 57; PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926); 4-alpha-glucanotransferase complement(1701678..1703696) Calditerrivibrio nitroreducens DSM 19672 10009681 YP_004051715.1 CDS Calni_1645 NC_014758.1 1703711 1705198 R COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterPro IPR003661: IPR003594: IPR005467; KEGG: ddf:DEFDS_1112 hypothetical protein; PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase, nitrogen specific, ntrb complement(1703711..1705198) Calditerrivibrio nitroreducens DSM 19672 10009682 YP_004051716.1 CDS Calni_1646 NC_014758.1 1705195 1706406 R COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR001992: IPR018076: IPR003004; KEGG: ddf:DEFDS_1111 type IV pilus assembly protein PilC; PFAM: Type II secretion system F domain; SPTR: Type IV pilus assembly protein PilC; PFAM: Bacterial type II secretion system protein F domain; type II secretion system f domain complement(1705195..1706406) Calditerrivibrio nitroreducens DSM 19672 10009683 YP_004051717.1 CDS Calni_1647 NC_014758.1 1706432 1707544 R COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482: IPR006321: IPR003593; KEGG: ddf:DEFDS_1110 twitching motility protein PilT; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Twitching motility protein PilT; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein complement(1706432..1707544) Calditerrivibrio nitroreducens DSM 19672 10009684 YP_004051718.1 CDS Calni_1648 NC_014758.1 1707562 1709262 R COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831: IPR013374; KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: Type IV pilus assembly protein PilB; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E; type IV-a pilus assembly atpase pilb complement(1707562..1709262) Calditerrivibrio nitroreducens DSM 19672 10009685 YP_004051719.1 CDS Calni_1649 NC_014758.1 1709272 1710063 R COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR013708: IPR006151: IPR011342; KEGG: ddf:DEFDS_1108 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: Shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(1709272..1710063) Calditerrivibrio nitroreducens DSM 19672 10009686 YP_004051720.1 CDS Calni_1650 NC_014758.1 1710056 1710742 R COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: ddf:DEFDS_1107 hypothetical protein; PFAM: protein of unknown function DUF502; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF502); hypothetical protein complement(1710056..1710742) Calditerrivibrio nitroreducens DSM 19672 10009687 YP_004051721.1 CDS Calni_1651 NC_014758.1 1710711 1711346 R COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836: IPR005765; KEGG: ddf:DEFDS_1106 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; uracil phosphoribosyltransferase complement(1710711..1711346) Calditerrivibrio nitroreducens DSM 19672 10009688 YP_004051722.1 CDS Calni_1652 NC_014758.1 1711349 1712581 R COGs: COG2233 Xanthine/uracil permease; InterPro IPR006042: IPR006043; KEGG: ddf:DEFDS_1105 uracil transporter; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Permease family; TIGRFAM: uracil-xanthine permease; uracil-xanthine permease complement(1711349..1712581) Calditerrivibrio nitroreducens DSM 19672 10009689 YP_004051723.1 CDS Calni_1653 NC_014758.1 1712574 1713509 R COGs: COG3481 HD-superfamily hydrolase; InterPro IPR004365: IPR006674: IPR006675: IPR003607; KEGG: ddf:DEFDS_1104 HAD-superfamily hydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region; SPTR: HAD-superfamily hydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; OB-fold nucleic acid binding domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase complement(1712574..1713509) Calditerrivibrio nitroreducens DSM 19672 10009690 YP_004051724.1 CDS Calni_1654 NC_014758.1 1713516 1713767 R KEGG: ddf:DEFDS_1102 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1713516..1713767) Calditerrivibrio nitroreducens DSM 19672 10009691 YP_004051725.1 CDS Calni_1655 NC_014758.1 1713764 1714156 R KEGG: ddf:DEFDS_1101 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1713764..1714156) Calditerrivibrio nitroreducens DSM 19672 10009692 YP_004051726.1 CDS Calni_1656 NC_014758.1 1714149 1714574 R COGs: COG0781 Transcription termination factor; InterPro IPR006027: IPR011605; KEGG: ddf:DEFDS_1100 N utilization substance protein B; PFAM: NusB/RsmB/TIM44; SPTR: N utilization substance protein B homolog; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; nusb antitermination factor complement(1714149..1714574) Calditerrivibrio nitroreducens DSM 19672 10009693 YP_004051727.1 CDS Calni_1657 NC_014758.1 1714574 1715047 R COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: ddf:DEFDS_1099 riboflavin synthase beta chain; PFAM: 67-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(1714574..1715047) Calditerrivibrio nitroreducens DSM 19672 10009694 YP_004051728.1 CDS Calni_1658 NC_014758.1 1715060 1716289 R COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR016299: IPR000422: IPR000926; KEGG: ddf:DEFDS_1098 riboflavin biosynthesis bifunctional protein RibBA; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: Riboflavin biosynthesis bifunctional protein RibBA; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase ii; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(1715060..1716289) Calditerrivibrio nitroreducens DSM 19672 10009695 YP_004051729.1 CDS Calni_1659 NC_014758.1 1716335 1716970 R COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: dap:Dacet_1324 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha complement(1716335..1716970) Calditerrivibrio nitroreducens DSM 19672 10009696 YP_004051730.1 CDS Calni_1660 NC_014758.1 1716955 1718112 R COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis; InterPro IPR016192: IPR002125: IPR002734: IPR004794: IPR 011549; KEGG: ddf:DEFDS_1096 bifunctional riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: Bifunctional riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein ribd complement(1716955..1718112) Calditerrivibrio nitroreducens DSM 19672 10009697 YP_004051731.1 CDS Calni_1661 NC_014758.1 1718105 1718701 R COGs: COG0344 membrane protein; InterPro IPR003811: IPR020788; KEGG: ddf:DEFDS_1095 hypothetical protein; PFAM: protein of unknown function DUF205; SPTR: Glycerol-3-phosphate acyltransferase; PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; acyl-phosphate glycerol-3-phosphate acyltransferase complement(1718105..1718701) Calditerrivibrio nitroreducens DSM 19672 10009698 YP_004051732.1 CDS Calni_1662 NC_014758.1 1718701 1719276 R COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462: IPR004570; KEGG: ddf:DEFDS_1093 phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase; PRIAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; SPTR: Phosphatidylglycerophosphate synthase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate3- phosphatidyltransferase complement(1718701..1719276) Calditerrivibrio nitroreducens DSM 19672 10009699 YP_004051733.1 CDS Calni_1663 NC_014758.1 1719289 1720629 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR002197: IPR003593: IPR 020441; KEGG: ddf:DEFDS_1092 two-component system response regulator PilR; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two-component system response regulator PilR; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator complement(1719289..1720629) Calditerrivibrio nitroreducens DSM 19672 10009700 YP_004051734.1 CDS Calni_1664 NC_014758.1 1720631 1721104 R COGs: COG0782 Transcription elongation factor; InterPro IPR018151: IPR001437: IPR006359; KEGG: ddf:DEFDS_1091 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; SPTR: Transcription elongation factor; TIGRFAM: transcription elongation factor GreA; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor grea complement(1720631..1721104) Calditerrivibrio nitroreducens DSM 19672 10009701 YP_004051735.1 CDS Calni_1665 NC_014758.1 1721097 1722449 R COGs: COG1570 Exonuclease VII large subunit; InterPro IPR004365: IPR020579: IPR003753; KEGG: ddf:DEFDS_1090 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Exodeoxyribonuclease 7 large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; exodeoxyribonuclease vii, large subunit complement(1721097..1722449) Calditerrivibrio nitroreducens DSM 19672 10009702 YP_004051736.1 CDS Calni_1666 NC_014758.1 1722403 1722708 R InterPro IPR007060; KEGG: ddf:DEFDS_1089 cell division protein FtsB; PFAM: Septum formation initiator; SPTR: Cell division protein FtsB; PFAM: Septum formation initiator; septum formation initiator complement(1722403..1722708) Calditerrivibrio nitroreducens DSM 19672 10009703 YP_004051737.1 CDS Calni_1667 NC_014758.1 1722710 1723840 R KEGG: ddf:DEFDS_1088 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1722710..1723840) Calditerrivibrio nitroreducens DSM 19672 10009704 YP_004051738.1 CDS Calni_1668 NC_014758.1 1723833 1725044 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dap:Dacet_0878 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1723833..1725044) Calditerrivibrio nitroreducens DSM 19672 10009705 YP_004051739.1 CDS Calni_1669 NC_014758.1 1725041 1725568 R InterPro IPR003006; KEGG: ddf:DEFDS_1086 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1725041..1725568) Calditerrivibrio nitroreducens DSM 19672 10009706 YP_004051740.1 CDS Calni_1670 NC_014758.1 1725569 1725796 R COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR001163: IPR005001; KEGG: ddf:DEFDS_1085 RNA-binding protein Hfq; PFAM: Like-Sm ribonucleoprotein core; SPTR: Protein hfq; TIGRFAM: RNA chaperone Hfq; PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA-binding protein hfq complement(1725569..1725796) Calditerrivibrio nitroreducens DSM 19672 10009707 YP_004051741.1 CDS Calni_1671 NC_014758.1 1725929 1726573 D InterPro IPR009501; KEGG: ddf:DEFDS_1632 hypothetical protein; SPTR: uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556; hypothetical protein 1725929..1726573 Calditerrivibrio nitroreducens DSM 19672 10009708 YP_004051742.1 CDS Calni_1672 NC_014758.1 1726605 1727981 D COGs: COG2206 HD-GYP domain; InterPro IPR003018: IPR006674: IPR003607; KEGG: ddf:DEFDS_1565 metal dependent phosphohydrolase; PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; PFAM: HD domain; GAF domain; metal dependent phosphohydrolase with gaf sensor 1726605..1727981 Calditerrivibrio nitroreducens DSM 19672 10009709 YP_004051743.1 CDS Calni_1673 NC_014758.1 1727994 1728347 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_1564 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: uncharacterized protein; PFAM: Response regulator receiver domain; response regulator receiver protein 1727994..1728347 Calditerrivibrio nitroreducens DSM 19672 10009710 YP_004051744.1 CDS Calni_1674 NC_014758.1 1728340 1729086 D COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004143: IPR004408; KEGG: dap:Dacet_1239 biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: Biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--acetyl-CoA-carboxylase ligase 1728340..1729086 Calditerrivibrio nitroreducens DSM 19672 10009711 YP_004051745.1 CDS Calni_1675 NC_014758.1 1729083 1729853 D COGs: COG1521 transcriptional regulator protein; InterPro IPR004619; KEGG: dap:Dacet_1240 transcriptional acitvator, Baf family; PFAM: Bvg accessory factor; PRIAM: Pantothenate kinase; SPTR: transcriptional acitvator, Baf family; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; pantothenate kinase 1729083..1729853 Calditerrivibrio nitroreducens DSM 19672 10009712 YP_004051746.1 CDS Calni_1676 NC_014758.1 1729837 1730577 D COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR001440: IPR019734: IPR013026; KEGG: ddf:DEFDS_1561 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: uncharacterized protein; PFAM: Tetratricopeptide repeat; tetratricopeptide tpr_1 repeat-containing protein 1729837..1730577 Calditerrivibrio nitroreducens DSM 19672 10009713 YP_004051747.1 CDS Calni_1677 NC_014758.1 1730574 1731446 D COGs: COG1426 conserved hypothetical protein; KEGG: ddf:DEFDS_1560 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1730574..1731446 Calditerrivibrio nitroreducens DSM 19672 10009714 YP_004051748.1 CDS Calni_1678 NC_014758.1 1731528 1732709 D COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR016454: IPR000192; KEGG: ddf:DEFDS_1558 cysteine desulfurase; PFAM: aminotransferase class V; SPTR: Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; aminotransferase class v 1731528..1732709 Calditerrivibrio nitroreducens DSM 19672 10009715 YP_004051749.1 CDS Calni_1679 NC_014758.1 1732730 1733170 D COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871: IPR017787; KEGG: ddf:DEFDS_1557 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Nitrogen-fixing NifU domain protein; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type; fes cluster assembly scaffold protein nifu 1732730..1733170 Calditerrivibrio nitroreducens DSM 19672 10009716 YP_004051750.1 CDS Calni_1680 NC_014758.1 1733186 1733413 D COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: ddf:DEFDS_1556 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Nitrogen-fixing NifU domain protein; PFAM: NifU-like domain; nitrogen-fixing nifu domain-containing protein 1733186..1733413 Calditerrivibrio nitroreducens DSM 19672 10009717 YP_004051751.1 CDS Calni_1682 NC_014758.1 1733849 1735384 D InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_0353 hypothetical protein; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 1733849..1735384 Calditerrivibrio nitroreducens DSM 19672 10009719 YP_004051752.1 CDS Calni_1683 NC_014758.1 1735393 1735542 R KEGG: dap:Dacet_0329 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1735393..1735542) Calditerrivibrio nitroreducens DSM 19672 10009720 YP_004051753.1 CDS Calni_1684 NC_014758.1 1735557 1736216 R COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541: IPR003557; KEGG: dap:Dacet_0330 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein; cytochrome c assembly protein complement(1735557..1736216) Calditerrivibrio nitroreducens DSM 19672 10009721 YP_004051754.1 CDS Calni_1685 NC_014758.1 1736219 1736899 R COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: ddf:DEFDS_0176 heme exporter membrane protein; PFAM: cytochrome c-type biogenesis protein CcmB; SPTR: Heme exporter membrane protein; PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB; cytochrome c-type biogenesis protein ccmb complement(1736219..1736899) Calditerrivibrio nitroreducens DSM 19672 10009722 YP_004051755.1 CDS Calni_1686 NC_014758.1 1736902 1737609 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: ddf:DEFDS_0175 heme exporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Heme exporter ATP-binding protein; manually curated; PFAM: ABC transporter; ABC transporter complement(1736902..1737609) Calditerrivibrio nitroreducens DSM 19672 10009723 YP_004051756.1 CDS Calni_1687 NC_014758.1 1737599 1739500 R COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541: IPR003567; KEGG: ddf:DEFDS_0174 cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; cytochrome c assembly protein complement(1737599..1739500) Calditerrivibrio nitroreducens DSM 19672 10009724 YP_004051757.1 CDS Calni_1688 NC_014758.1 1739513 1739920 R COGs: COG2332 Cytochrome c-type biogenesis protein CcmE; InterPro IPR004329; KEGG: dap:Dacet_0334 cytochrome c-type biogenesis protein CcmE; PFAM: CcmE/CycJ protein; SPTR: Cytochrome c-type biogenesis protein CcmE; PFAM: CcmE; ccme/cycj protein complement(1739513..1739920) Calditerrivibrio nitroreducens DSM 19672 10009725 YP_004051758.1 CDS Calni_1689 NC_014758.1 1740116 1740550 D InterPro IPR007922; KEGG: ddf:DEFDS_0268 hypothetical protein; PFAM: protein of unknown function DUF721; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF721); hypothetical protein 1740116..1740550 Calditerrivibrio nitroreducens DSM 19672 10009726 YP_004051759.1 CDS Calni_1690 NC_014758.1 1740545 1741081 R COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: tko:TK1650 nicotinamidase; PFAM: isochorismatase hydrolase; PRIAM: Nicotinamidase; SPTR: Probable nicotinamidase; PFAM: Isochorismatase family; nicotinamidase complement(1740545..1741081) Calditerrivibrio nitroreducens DSM 19672 10009727 YP_004051760.1 CDS Calni_1691 NC_014758.1 1741059 1742447 R COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR007229: IPR015977: IPR006405; KEGG: cbc:CbuK_0807 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase complement(1741059..1742447) Calditerrivibrio nitroreducens DSM 19672 10009728 YP_004051761.1 CDS Calni_1692 NC_014758.1 1742568 1744109 R InterPro IPR018631: IPR012547; KEGG: saf:SULAZ_0094 conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: Conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA complement(1742568..1744109) Calditerrivibrio nitroreducens DSM 19672 10009729 YP_004051762.1 CDS Calni_1693 NC_014758.1 1744377 1744799 R KEGG: ddf:DEFDS_0789 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein complement(1744377..1744799) Calditerrivibrio nitroreducens DSM 19672 10009730 YP_004051763.1 CDS Calni_1694 NC_014758.1 1744762 1746399 R KEGG: dap:Dacet_0326 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1744762..1746399) Calditerrivibrio nitroreducens DSM 19672 10009731 YP_004051764.1 CDS Calni_1695 NC_014758.1 1746582 1747880 R KEGG: dap:Dacet_0327 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1746582..1747880) Calditerrivibrio nitroreducens DSM 19672 10009732 YP_004051765.1 CDS Calni_1696 NC_014758.1 1748230 1749141 R COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: ddf:DEFDS_2079 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: Transcriptional regulator, LysR family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator transcriptional regulator complement(1748230..1749141) Calditerrivibrio nitroreducens DSM 19672 10009733 YP_004051766.1 CDS Calni_1697 NC_014758.1 1749414 1749605 R KEGG: ddf:DEFDS_0056 hypothetical protein; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF2892); hypothetical protein complement(1749414..1749605) Calditerrivibrio nitroreducens DSM 19672 10009734 YP_004051767.1 CDS Calni_1698 NC_014758.1 1749622 1752858 R COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ddf:DEFDS_0055 acriflavin resistance protein, AcrB/AcrD/AcrF family; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein, AcrB/AcrD/AcrF family; PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein complement(1749622..1752858) Calditerrivibrio nitroreducens DSM 19672 10009735 YP_004051768.1 CDS Calni_1699 NC_014758.1 1752859 1754031 R COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ddf:DEFDS_0054 acriflavin resistance protein, AcrA/AcrE family; PFAM: secretion protein HlyD family protein; SPTR: Acriflavin resistance protein, AcrA/AcrE family; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter, rnd family, mfp subunit complement(1752859..1754031) Calditerrivibrio nitroreducens DSM 19672 10009736 YP_004051769.1 CDS Calni_1700 NC_014758.1 1754069 1755376 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ddf:DEFDS_0053 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: uncharacterized protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(1754069..1755376) Calditerrivibrio nitroreducens DSM 19672 10009737 YP_004051770.1 CDS Calni_1701 NC_014758.1 1755377 1755640 R InterPro IPR001845; KEGG: ddf:DEFDS_0179 AsrR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, AsrR family; PFAM: Bacterial regulatory protein, arsR family; ArsR family transcriptional regulator complement(1755377..1755640) Calditerrivibrio nitroreducens DSM 19672 10009738 YP_004051771.1 CDS Calni_1702 NC_014758.1 1755780 1757123 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR003593; KEGG: ddf:DEFDS_1376 two-component system, NtrC family, response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: Two-component system, NtrC family, response regulator; PFAM: Response regulator receiver domain; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator 1755780..1757123 Calditerrivibrio nitroreducens DSM 19672 10009739 YP_004051772.1 CDS Calni_1703 NC_014758.1 1757116 1758093 D COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389: IPR004682; KEGG: ddf:DEFDS_1375 C4-dicarboxylate transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: C4-dicarboxylate transporter, substrate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; trap dicarboxylate transporter subunit DctP 1757116..1758093 Calditerrivibrio nitroreducens DSM 19672 10009740 YP_004051773.1 CDS Calni_1704 NC_014758.1 1758389 1759591 D InterPro IPR010656: IPR017452; KEGG: ddf:DEFDS_1374 hypothetical protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: uncharacterized protein; PFAM: DctM-like transporters; trap c4-dicarboxylate transport system permease dctm subunit 1758389..1759591 Calditerrivibrio nitroreducens DSM 19672 10009741 YP_004051774.1 CDS Calni_1705 NC_014758.1 1759619 1760902 R COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656: IPR004681; KEGG: ddf:DEFDS_0684 C4-dicarboxylate transporter large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C4-dicarboxylate transporter, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; trap dicarboxylate transporter subunit DctM complement(1759619..1760902) Calditerrivibrio nitroreducens DSM 19672 10009742 YP_004051775.1 CDS Calni_1706 NC_014758.1 1760904 1761425 R COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: ddf:DEFDS_0683 C4-dicarboxylate transporter small subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: C4-dicarboxylate transporter, small subunit; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; tripartite ATP-independent periplasmic transporter dctq component complement(1760904..1761425) Calditerrivibrio nitroreducens DSM 19672 10009743 YP_004051776.1 CDS Calni_1707 NC_014758.1 1761493 1762476 R COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389: IPR004682; KEGG: ddf:DEFDS_0682 C4-dicarboxylate transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: C4-dicarboxylate transporter, substrate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; trap dicarboxylate transporter subunit DctP complement(1761493..1762476) Calditerrivibrio nitroreducens DSM 19672 10009744 YP_004051777.1 CDS Calni_1708 NC_014758.1 1762781 1764151 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: pth:PTH_0546 hypothetical protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1762781..1764151) Calditerrivibrio nitroreducens DSM 19672 10009745 YP_004051778.1 CDS Calni_1709 NC_014758.1 1764160 1765620 R COGs: COG0297 Glycogen synthase; InterPro IPR013534: IPR001296: IPR011835; KEGG: glo:Glov_0388 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; PRIAM: Starch synthase; SPTR: Glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen synthase complement(1764160..1765620) Calditerrivibrio nitroreducens DSM 19672 10009746 YP_004051779.1 CDS Calni_1710 NC_014758.1 1765791 1766060 R COGs: COG0268 Ribosomal protein S20; InterPro IPR002583; KEGG: ddf:DEFDS_1532 30S ribosomal protein S20; PFAM: ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 complement(1765791..1766060) Calditerrivibrio nitroreducens DSM 19672 10009747 YP_004051780.1 CDS Calni_1711 NC_014758.1 1766229 1767017 R COGs: COG1414 Transcriptional regulator; InterPro IPR005471: IPR014757; KEGG: ddf:DEFDS_2106 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: Transcriptional regulator, IclR family; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; IclR family transcriptional regulator complement(1766229..1767017) Calditerrivibrio nitroreducens DSM 19672 10009748 YP_004051781.1 CDS Calni_1712 NC_014758.1 1767088 1767795 R COGs: COG2186 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: ddf:DEFDS_1345 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: GntR domain protein; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator complement(1767088..1767795) Calditerrivibrio nitroreducens DSM 19672 10009749 YP_004051782.1 CDS Calni_1713 NC_014758.1 1767938 1768420 D COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: ddf:DEFDS_1348 hypothetical protein; PFAM: protein of unknown function DUF162; SPTR: uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556; hypothetical protein 1767938..1768420 Calditerrivibrio nitroreducens DSM 19672 10009750 YP_004051783.1 CDS Calni_1714 NC_014758.1 1768423 1770543 D COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR007087: IPR017900: IPR003741: IPR004017: IPR 017896; KEGG: ddf:DEFDS_1349 iron-sulfur cluster-binding protein; PFAM: protein of unknown function DUF162; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Iron-sulfur cluster-binding protein; PFAM: Cysteine-rich domain; Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein; hypothetical protein 1768423..1770543 Calditerrivibrio nitroreducens DSM 19672 10009751 YP_004051784.1 CDS Calni_1715 NC_014758.1 1770613 1770954 D InterPro IPR001185; KEGG: ttj:TTHA0627 large-conductance mechanosensitive channel; PFAM: large-conductance mechanosensitive channel; SPTR: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel, MscL; large-conductance mechanosensitive channel 1770613..1770954 Calditerrivibrio nitroreducens DSM 19672 10009752 YP_004051785.1 CDS Calni_1716 NC_014758.1 1771023 1771724 D COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR020053: IPR001264: IPR011812; KEGG: sat:SYN_01407 monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; SPTR: Monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 1771023..1771724 Calditerrivibrio nitroreducens DSM 19672 10009753 YP_004051786.1 CDS Calni_1717 NC_014758.1 1771793 1772629 D KEGG: ddf:DEFDS_1354 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1771793..1772629 Calditerrivibrio nitroreducens DSM 19672 10009754 YP_004051787.1 CDS Calni_1718 NC_014758.1 1772637 1773458 D COGs: COG0730 permease; InterPro IPR002781; KEGG: ddf:DEFDS_1353 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 1772637..1773458 Calditerrivibrio nitroreducens DSM 19672 10009755 YP_004051788.1 CDS Calni_1719 NC_014758.1 1773455 1773757 D KEGG: sbi:SORBI_08g001220 hypothetical protein; SPTR: Sensory box histidine kinase; hypothetical protein 1773455..1773757 Calditerrivibrio nitroreducens DSM 19672 10009756 YP_004051789.1 CDS Calni_1720 NC_014758.1 1773793 1774923 R COGs: COG0206 Cell division GTPase; InterPro IPR020805: IPR003008: IPR018316: IPR000158; KEGG: ddf:DEFDS_0601 cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein ftsz complement(1773793..1774923) Calditerrivibrio nitroreducens DSM 19672 10009757 YP_004051790.1 CDS Calni_1721 NC_014758.1 1774943 1776178 R COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494: IPR020823; KEGG: ddf:DEFDS_0600 cell division protein FtsA; PFAM: cell division protein FtsA; SPTR: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; cell division protein ftsa complement(1774943..1776178) Calditerrivibrio nitroreducens DSM 19672 10009758 YP_004051791.1 CDS Calni_1722 NC_014758.1 1776168 1776842 R InterPro IPR013685; KEGG: dap:Dacet_2198 hypothetical protein; PFAM: Polypeptide-transport-associated domain protein FtsQ-type; SPTR: uncharacterized protein; PFAM: POTRA domain, FtsQ-type; polypeptide-transport-associated domain-containing protein ftsq-type complement(1776168..1776842) Calditerrivibrio nitroreducens DSM 19672 10009759 YP_004051792.1 CDS Calni_1723 NC_014758.1 1776835 1777731 R COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR000291: IPR011127: IPR011095: IPR011761: IPR 005905; KEGG: ddf:DEFDS_0598 D-alanine-D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; d-alanine--d-alanine ligase complement(1776835..1777731) Calditerrivibrio nitroreducens DSM 19672 10009760 YP_004051793.1 CDS Calni_1724 NC_014758.1 1777724 1779106 R COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713: IPR013221: IPR004101: IPR005758; KEGG: ddf:DEFDS_0597 UDP-N-acetylmuramate-alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--l-alanine ligase complement(1777724..1779106) Calditerrivibrio nitroreducens DSM 19672 10009761 YP_004051794.1 CDS Calni_1725 NC_014758.1 1779099 1780142 R COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR004276: IPR007235: IPR006009; KEGG: ddf:DEFDS_0596 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; undecaprenyldiphospho-muramoyl pentapeptide beta-n acetylglucosaminyl transferase complement(1779099..1780142) Calditerrivibrio nitroreducens DSM 19672 10009762 YP_004051795.1 CDS Calni_1726 NC_014758.1 1780139 1781224 R COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182: IPR013437; KEGG: ddf:DEFDS_0595 cell division protein FtsW; PFAM: cell cycle protein; SPTR: Cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; cell division protein ftsw complement(1780139..1781224) Calditerrivibrio nitroreducens DSM 19672 10009763 YP_004051796.1 CDS Calni_1727 NC_014758.1 1781218 1782468 R COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR018109: IPR013221: IPR004101: IPR005762; KEGG: ddf:DEFDS_0594 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine/d-glutamate ligase complement(1781218..1782468) Calditerrivibrio nitroreducens DSM 19672 10009764 YP_004051797.1 CDS Calni_1728 NC_014758.1 1782471 1783556 R COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480: IPR018481: IPR003524; KEGG: ddf:DEFDS_0593 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-trans ferase; PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; phospho-n-acetylmuramoyl-pentapeptide- transferase complement(1782471..1783556) Calditerrivibrio nitroreducens DSM 19672 10009765 YP_004051798.1 CDS Calni_1729 NC_014758.1 1783546 1784886 R COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713: IPR013221: IPR005863; KEGG: dap:Dacet_2205 Mur ligase middle domain protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: Mur ligase middle domain protein; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-d iaminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate/d-alanyl-d-alanyl ligase complement(1783546..1784886) Calditerrivibrio nitroreducens DSM 19672 10009766 YP_004051799.1 CDS Calni_1730 NC_014758.1 1784873 1786327 R COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR018109: IPR013221: IPR004101: IPR005761; KEGG: ddf:DEFDS_0591 UDP-N-acetylmuramoylananine-D-glutamate-2,6- diaminopimelate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR:UDP-N-acetylmuramoylananine-D-glutamate-2,6-di aminopimelateligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl tripeptide synthetase complement(1784873..1786327) Calditerrivibrio nitroreducens DSM 19672 10009767 YP_004051800.1 CDS Calni_1731 NC_014758.1 1786317 1787978 R COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311: IPR001460; KEGG: dap:Dacet_2207 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; peptidoglycan glycosyltransferase complement(1786317..1787978) Calditerrivibrio nitroreducens DSM 19672 10009768 YP_004051801.1 CDS Calni_1732 NC_014758.1 1787968 1788267 R KEGG: ddf:DEFDS_0589 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1787968..1788267) Calditerrivibrio nitroreducens DSM 19672 10009769 YP_004051802.1 CDS Calni_1733 NC_014758.1 1788264 1789202 R COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: ddf:DEFDS_0588 S-adenosyl-methyltransferase; PFAM: methyltransferase; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; s-adenosyl-methyltransferase mraw complement(1788264..1789202) Calditerrivibrio nitroreducens DSM 19672 10009770 YP_004051803.1 CDS Calni_1734 NC_014758.1 1789214 1789681 R COGs: COG2001 conserved hypothetical protein; InterPro IPR020603: IPR003444; KEGG: ddf:DEFDS_0587 hypothetical protein; PFAM: MraZ domain; SPTR: Protein mraZ; TIGRFAM: MraZ protein; PFAM: MraZ protein; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; mraZ protein; mraz protein complement(1789214..1789681) Calditerrivibrio nitroreducens DSM 19672 10009771 YP_004051804.1 CDS Calni_1735 NC_014758.1 1789846 1792374 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR013655: IPR003661: IPR003594: IPR001789: IPR 005467: IPR000014: IPR004358; KEGG: mpi:Mpet_0061 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 1789846..1792374 Calditerrivibrio nitroreducens DSM 19672 10009772 YP_004051805.1 CDS Calni_1736 NC_014758.1 1792485 1793207 D COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: ddf:DEFDS_0217 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Rhomboid family protein; PFAM: Rhomboid family; rhomboid family protein 1792485..1793207 Calditerrivibrio nitroreducens DSM 19672 10009773 YP_004051806.1 CDS Calni_1737 NC_014758.1 1793220 1794035 D COGs: COG0616 Periplasmic serine protease (ClpP class); KEGG: ddf:DEFDS_0218 hypothetical protein; SPTR: uncharacterized protein; PFAM: Serine dehydrogenase proteinase; hypothetical protein 1793220..1794035 Calditerrivibrio nitroreducens DSM 19672 10009774 YP_004051807.1 CDS Calni_1738 NC_014758.1 1794354 1795307 D COGs: COG1275 Tellurite resistance protein and related permease; InterPro IPR004695; KEGG: rrs:RoseRS_2285 C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; SPTR: C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein; c4-dicarboxylate transporter/malic acid transport protein 1794354..1795307 Calditerrivibrio nitroreducens DSM 19672 10009775 YP_004051808.1 CDS Calni_1739 NC_014758.1 1795410 1798706 R COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterPro IPR003711: IPR011545: IPR001650: IPR005118: IPR 014021: IPR004576: IPR014001; KEGG: ddf:DEFDS_0229 transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor complement(1795410..1798706) Calditerrivibrio nitroreducens DSM 19672 10009776 YP_004051809.1 CDS Calni_1740 NC_014758.1 1798696 1799172 R COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR004820: IPR011914: IPR004821; KEGG: ddf:DEFDS_0228 glycerol-3-phosphate cytidyltransferase; PFAM: cytidylyltransferase; SPTR: Glycerol-3-phosphate cytidyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain; d-beta-d-heptose 1-phosphate adenylyltransferase complement(1798696..1799172) Calditerrivibrio nitroreducens DSM 19672 10009777 YP_004051810.1 CDS Calni_1741 NC_014758.1 1799173 1799760 R COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347: IPR004515: IPR020620; KEGG: dap:Dacet_0259 phosphoheptose isomerase-like protein; PFAM: sugar isomerase (SIS); SPTR: Phosphoheptose isomerase-like protein; TIGRFAM: phosphoheptose isomerase; PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; phosphoheptose isomerase complement(1799173..1799760) Calditerrivibrio nitroreducens DSM 19672 10009778 YP_004051811.1 CDS Calni_1742 NC_014758.1 1799768 1801066 R COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714: IPR006596; KEGG: ddf:DEFDS_0226 phosphate starvation-induced protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; SPTR: Phosphate starvation-induced protein; PFAM: PhoH-like protein; phoh family protein complement(1799768..1801066) Calditerrivibrio nitroreducens DSM 19672 10009779 YP_004051812.1 CDS Calni_1743 NC_014758.1 1801229 1802590 D COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509: IPR013549: IPR010099; KEGG: dap:Dacet_2899 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; SPTR: uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777; nad-dependent epimerase/dehydratase 1801229..1802590 Calditerrivibrio nitroreducens DSM 19672 10009780 YP_004051813.1 CDS Calni_1744 NC_014758.1 1802583 1803671 D KEGG: dap:Dacet_2898 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1802583..1803671 Calditerrivibrio nitroreducens DSM 19672 10009781 YP_004051814.1 CDS Calni_1745 NC_014758.1 1803761 1804054 R COGs: COG0316 conserved hypothetical protein; Contains Selenocysteine; InterPro IPR000361; KEGG: glo:Glov_1950 HesB/YadR/YfhF-family protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: HesB/YadR/YfhF-family protein; manually curated; PFAM: Iron-sulphur cluster biosynthesis; hesb/yadr/yfhf-family protein complement(1803761..1804054) Calditerrivibrio nitroreducens DSM 19672 10009782 YP_004051815.1 CDS Calni_1746 NC_014758.1 1804135 1806900 R COGs: COG3893 Inactivated superfamily I helicase; KEGG: dsa:Desal_2713 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1804135..1806900) Calditerrivibrio nitroreducens DSM 19672 10009783 YP_004051816.1 CDS Calni_1747 NC_014758.1 1806878 1809967 R COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212: IPR014016: IPR014017; KEGG: rsd:TGRD_136 RecB-like exodeoxyribonuclease V beta chain; PFAM: UvrD/REP helicase; SPTR: uncharacterized protein; PFAM: UvrD/REP helicase; uvrd/rep helicase complement(1806878..1809967) Calditerrivibrio nitroreducens DSM 19672 10009784 YP_004051817.1 CDS Calni_1748 NC_014758.1 1810433 1811419 D COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149: IPR014189; KEGG: geo:Geob_1083 NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: NAD(P)H quinone oxidoreductase, PIG3 family; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; nad(p)h quinone oxidoreductase, pig3 family 1810433..1811419 Calditerrivibrio nitroreducens DSM 19672 10009785 YP_004051818.1 CDS Calni_1749 NC_014758.1 1811454 1812326 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR010065; KEGG: ddf:DEFDS_1239 polar amino acid ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit complement(1811454..1812326) Calditerrivibrio nitroreducens DSM 19672 10009786 YP_004051819.1 CDS Calni_1750 NC_014758.1 1812372 1813166 R COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313: IPR001638: IPR001320; KEGG: ddf:DEFDS_1238 polar amino acid ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: Polar amino acid ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein, paat family complement(1812372..1813166) Calditerrivibrio nitroreducens DSM 19672 10009787 YP_004051820.1 CDS Calni_1751 NC_014758.1 1813163 1813942 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR010065; KEGG: ddf:DEFDS_1237 polar amino acid ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit complement(1813163..1813942) Calditerrivibrio nitroreducens DSM 19672 10009788 YP_004051821.1 CDS Calni_1752 NC_014758.1 1813988 1815307 R COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646: IPR006674: IPR006675: IPR003607; KEGG: ddf:DEFDS_0057 tRNA nucleotidyltransferase (CCA-adding enzyme); PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: tRNA nucleotidyltransferase (CCA-adding enzyme); TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; polynucleotide adenylyltransferase/metal dependent phosphohydrolase complement(1813988..1815307) Calditerrivibrio nitroreducens DSM 19672 10009789 YP_004051822.1 CDS Calni_1753 NC_014758.1 1815286 1815876 R COGs: COG1751 conserved hypothetical protein; InterPro IPR015074; KEGG: fpl:Ferp_1595 protein of unknown function DUF1867; SPTR: uncharacterized protein; PFAM: Pyruvate kinase, alpha/beta domain; hypothetical protein complement(1815286..1815876) Calditerrivibrio nitroreducens DSM 19672 10009790 YP_004051823.1 CDS Calni_1754 NC_014758.1 1815896 1816372 D COGs: COG0622 phosphoesterase; InterPro IPR004843: IPR000979; KEGG: ddf:DEFDS_0058 hypothetical protein; PFAM: metallophosphoesterase; SPTR: uncharacterized protein; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; phosphodiesterase, mj0936 family 1815896..1816372 Calditerrivibrio nitroreducens DSM 19672 10009791 YP_004051824.1 CDS Calni_1755 NC_014758.1 1816383 1817726 D COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR006076; KEGG: ddf:DEFDS_0059 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; fad dependent oxidoreductase 1816383..1817726 Calditerrivibrio nitroreducens DSM 19672 10009792 YP_004051825.1 CDS Calni_1756 NC_014758.1 1817736 1818746 D COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR000257: IPR006361; KEGG: ddf:DEFDS_0318 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase 1817736..1818746 Calditerrivibrio nitroreducens DSM 19672 10009793 YP_004051826.1 CDS Calni_1757 NC_014758.1 1818733 1819695 D COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR019772: IPR001015; KEGG: dap:Dacet_1257 ferrochelatase; PFAM: ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; ferrochelatase 1818733..1819695 Calditerrivibrio nitroreducens DSM 19672 10009794 YP_004051827.1 CDS Calni_1758 NC_014758.1 1819695 1820549 D COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537: IPR006371; KEGG: ddf:DEFDS_0320 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 1819695..1820549 Calditerrivibrio nitroreducens DSM 19672 10009795 YP_004051828.1 CDS Calni_1759 NC_014758.1 1820551 1821153 D COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR003382: IPR004507; KEGG: dap:Dacet_1255 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1820551..1821153 Calditerrivibrio nitroreducens DSM 19672 10009796 YP_004051829.1 CDS Calni_1760 NC_014758.1 1821137 1821529 D KEGG: ddf:DEFDS_0322 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1821137..1821529 Calditerrivibrio nitroreducens DSM 19672 10009797 YP_004051830.1 CDS Calni_1761 NC_014758.1 1821548 1821859 D KEGG: ddf:DEFDS_0323 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1821548..1821859 Calditerrivibrio nitroreducens DSM 19672 10009798 YP_004051831.1 CDS Calni_1762 NC_014758.1 1821856 1822689 D COGs: COG1639 signal transduction protein; InterPro IPR013976: IPR006675: IPR003607; KEGG: ddf:DEFDS_0324 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 1821856..1822689 Calditerrivibrio nitroreducens DSM 19672 10009799 YP_004051832.1 CDS Calni_1763 NC_014758.1 1822686 1823129 D KEGG: ddf:DEFDS_0325 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1822686..1823129 Calditerrivibrio nitroreducens DSM 19672 10009800 YP_004051833.1 CDS Calni_1764 NC_014758.1 1823131 1825572 R COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR000630: IPR005646: IPR000719: IPR002290; KEGG: ddf:DEFDS_1136 hypothetical protein; PFAM: protein of unknown function DUF342; SMART: serine/threonine protein kinase; SPTR: uncharacterized protein; PFAM: Protein kinase domain; Protein of unknown function (DUF342); serine/threonine protein kinase complement(1823131..1825572) Calditerrivibrio nitroreducens DSM 19672 10009801 YP_004051834.1 CDS Calni_1765 NC_014758.1 1826168 1827673 R COGs: COG0348 Polyferredoxin; InterPro IPR017900: IPR017896; KEGG: dak:DaAHT2_0700 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; TIGRFAM: MauM/NapG family ferredoxin-type protein; 4fe-4S ferredoxin iron-sulfur binding domain-containing protein complement(1826168..1827673) Calditerrivibrio nitroreducens DSM 19672 10009805 YP_004051835.1 CDS Calni_1766 NC_014758.1 1827660 1828541 R COGs: COG2006 conserved hypothetical protein; KEGG: sat:SYN_02059 cytoplasmic protein; SPTR: Hypothetical cytosolic protein; PFAM: Domain of unknown function (DUF362); hypothetical protein complement(1827660..1828541) Calditerrivibrio nitroreducens DSM 19672 10009806 YP_004051836.1 CDS Calni_1767 NC_014758.1 1828669 1829286 D COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR010237: IPR006402; KEGG: ddf:DEFDS_1650 pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Pyrimidine 5'-nucleotidase; TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; pyrimidine 5'-nucleotidase; pyrimidine 5'-nucleotidase 1828669..1829286 Calditerrivibrio nitroreducens DSM 19672 10009807 YP_004051837.1 CDS Calni_1769 NC_014758.1 1829854 1830219 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: dap:Dacet_2704 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein 1829854..1830219 Calditerrivibrio nitroreducens DSM 19672 10009809 YP_004051838.1 CDS Calni_1770 NC_014758.1 1830212 1831291 D COGs: COG1639 signal transduction protein; InterPro IPR013976: IPR006675; KEGG: dap:Dacet_2705 metal dependent phosphohydrolase; PFAM: Metal-dependent hydrolase HDOD; SPTR: Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG; signal transduction protein 1830212..1831291 Calditerrivibrio nitroreducens DSM 19672 10009810 YP_004051839.1 CDS Calni_1771 NC_014758.1 1831284 1832849 D COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822: IPR001932; KEGG: dap:Dacet_2706 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; SPTR: Protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E (SpoIIE); protein serine/threonine phosphatase 1831284..1832849 Calditerrivibrio nitroreducens DSM 19672 10009811 YP_004051840.1 CDS Calni_1772 NC_014758.1 1832852 1833538 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: ddf:DEFDS_1643 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase 1832852..1833538 Calditerrivibrio nitroreducens DSM 19672 10009812 YP_004051841.1 CDS Calni_1773 NC_014758.1 1833549 1834997 D COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: ddf:DEFDS_1642 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; PFAM: Carboxylyase-related protein; SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; UbiD family decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1833549..1834997 Calditerrivibrio nitroreducens DSM 19672 10009813 YP_004051842.1 CDS Calni_1774 NC_014758.1 1834976 1835608 D COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265: IPR003651: IPR005759; KEGG: ddf:DEFDS_1641 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: Endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase 1834976..1835608 Calditerrivibrio nitroreducens DSM 19672 10009814 YP_004051843.1 CDS Calni_1775 NC_014758.1 1835861 1836967 D COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: ddf:DEFDS_P121 transposase; PFAM: transposase mutator type; SPTR: Transposase; PFAM: Transposase, Mutator family; transposase mutator type 1835861..1836967 Calditerrivibrio nitroreducens DSM 19672 10009815 YP_004051844.1 CDS Calni_1776 NC_014758.1 1837070 1838557 D COGs: COG2199 FOG: GGDEF domain; InterPro IPR004010: IPR000160; KEGG: ddf:DEFDS_0866 hypothetical protein; PFAM: GGDEF domain containing protein; Cache domain protein; SMART: GGDEF domain containing protein; SPTR: uncharacterized protein; TIGRFAM: diguanylate cyclase; PFAM: Cache domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1837070..1838557 Calditerrivibrio nitroreducens DSM 19672 10009816 YP_004051845.1 CDS Calni_1777 NC_014758.1 1838945 1840552 D COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547: IPR002645; KEGG: dap:Dacet_2356 sulphate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Sulphate transporter; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; sulfate transporter 1838945..1840552 Calditerrivibrio nitroreducens DSM 19672 10009817 YP_004051846.1 CDS Calni_1778 NC_014758.1 1840592 1841437 R COGs: COG1806 conserved hypothetical protein; InterPro IPR005177; KEGG: ddf:DEFDS_0531 hypothetical protein; PFAM: protein of unknown function DUF299; SPTR: phosphotransferase DEFDS_0531; PFAM: Domain of unknown function (DUF299); hypothetical protein complement(1840592..1841437) Calditerrivibrio nitroreducens DSM 19672 10009818 YP_004051847.1 CDS Calni_1779 NC_014758.1 1841437 1843404 R COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterPro IPR018239: IPR001679: IPR013839: IPR004150: IPR 001357: IPR013840: IPR003583; KEGG: ddf:DEFDS_0530 NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; SPTR: DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; DNA ligase, nad-dependent complement(1841437..1843404) Calditerrivibrio nitroreducens DSM 19672 10009819 YP_004051848.1 CDS Calni_1780 NC_014758.1 1843401 1844600 R COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: ddf:DEFDS_0529 peptidase U32 family; PFAM: peptidase U32; SPTR: Peptidase, U32 family; PFAM: Peptidase family U32; peptidase u32 complement(1843401..1844600) Calditerrivibrio nitroreducens DSM 19672 10009820 YP_004051849.1 CDS Calni_1781 NC_014758.1 1844590 1845219 R COGs: COG4122 O-methyltransferase; InterPro IPR013216; KEGG: ddf:DEFDS_0528 caffeoyl-CoA O-methyltransferase; PFAM: Methyltransferase type 11; SPTR: Caffeoyl-CoA O-methyltransferase; PFAM: O-methyltransferase; type 11 methyltransferase complement(1844590..1845219) Calditerrivibrio nitroreducens DSM 19672 10009821 YP_004051850.1 CDS Calni_1782 NC_014758.1 1845223 1845696 R KEGG: ddf:DEFDS_0527 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1845223..1845696) Calditerrivibrio nitroreducens DSM 19672 10009822 YP_004051851.1 CDS Calni_1783 NC_014758.1 1845686 1846123 R KEGG: ddf:DEFDS_0526 flagellar protein FliJ; SPTR: Flagellar protein FliJ; PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; flagellar protein flij complement(1845686..1846123) Calditerrivibrio nitroreducens DSM 19672 10009823 YP_004051852.1 CDS Calni_1784 NC_014758.1 1846128 1847432 R COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR020003: IPR004100: IPR000194: IPR005714: IPR 003593; KEGG: ddf:DEFDS_0525 flagellar-specific ATP synthase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; SPTR: Flagellar-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI; type III secretion system atpase, flii/yscn complement(1846128..1847432) Calditerrivibrio nitroreducens DSM 19672 10009824 YP_004051853.1 CDS Calni_1785 NC_014758.1 1847410 1848180 R COGs: COG1317 Flagellar biosynthesis/type III secretory pathway protein; InterPro IPR018035; KEGG: ddf:DEFDS_0524 flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; SPTR: Flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH; flagellar assembly protein flih/type iii secretion system hrpe complement(1847410..1848180) Calditerrivibrio nitroreducens DSM 19672 10009825 YP_004051854.1 CDS Calni_1786 NC_014758.1 1848234 1849238 R COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: ddf:DEFDS_0523 flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein flig complement(1848234..1849238) Calditerrivibrio nitroreducens DSM 19672 10009826 YP_004051855.1 CDS Calni_1787 NC_014758.1 1849242 1850906 R COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; InterPro IPR006182: IPR013556: IPR000067; KEGG: ddf:DEFDS_0522 flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; SPTR: Flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar m-ring protein flif complement(1849242..1850906) Calditerrivibrio nitroreducens DSM 19672 10009827 YP_004051856.1 CDS Calni_1788 NC_014758.1 1850914 1851213 R COGs: COG1677 Flagellar hook-basal body protein; InterPro IPR001624; KEGG: ddf:DEFDS_0521 flagellar hook-basal body complex protein FliE; PFAM: flagellar hook-basal body complex protein FliE; SPTR: Flagellar hook-basal body complex protein fliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit flie complement(1850914..1851213) Calditerrivibrio nitroreducens DSM 19672 10009828 YP_004051857.1 CDS Calni_1789 NC_014758.1 1851267 1851671 R COGs: COG1558 Flagellar basal body rod protein; InterPro IPR019776: IPR001444: IPR010930: IPR006299; KEGG: ddf:DEFDS_0520 flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein flgc complement(1851267..1851671) Calditerrivibrio nitroreducens DSM 19672 10009829 YP_004051858.1 CDS Calni_1790 NC_014758.1 1851680 1852084 R COGs: COG1815 Flagellar basal body protein; InterPro IPR019776: IPR001444: IPR006300; KEGG: ddf:DEFDS_0519 flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; SPTR: Flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein flgb complement(1851680..1852084) Calditerrivibrio nitroreducens DSM 19672 10009830 YP_004051859.1 CDS Calni_1791 NC_014758.1 1852184 1852666 D COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: pho:PH0320 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; 5-(carboxyamino)imidazole ribonucleotide mutase 1852184..1852666 Calditerrivibrio nitroreducens DSM 19672 10009831 YP_004051860.1 CDS Calni_1792 NC_014758.1 1852656 1853681 D COGs: COG0009 translation factor (SUA5); InterPro IPR010923: IPR006070: IPR005145: IPR004388; KEGG: mbu:Mbur_0139 translation factor SUA5; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein; SPTR: SUA5-type translation factor; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; sua5/ycio/yrdc/ywlc family protein 1852656..1853681 Calditerrivibrio nitroreducens DSM 19672 10009832 YP_004051861.1 CDS Calni_1793 NC_014758.1 1853740 1854039 D COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR003369: IPR003998; KEGG: ddf:DEFDS_2139 twin-arginine translocation system component TatB; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Twin-arginine translocation system component TatB; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase TatB; sec-independent translocation protein mtta/hcf106 1853740..1854039 Calditerrivibrio nitroreducens DSM 19672 10009833 YP_004051862.1 CDS Calni_1794 NC_014758.1 1854036 1854785 D COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR019820: IPR002033: IPR019822; KEGG: ddf:DEFDS_2140 twin-arginine translocation system component TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Twin-arginine translocation system component TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; sec-independent protein translocase, tatc subunit 1854036..1854785 Calditerrivibrio nitroreducens DSM 19672 10009834 YP_004051863.1 CDS Calni_1795 NC_014758.1 1854778 1855761 D COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR000385: IPR007197: IPR010505: IPR013483: IPR 006638; KEGG: dap:Dacet_2442 molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; GTP cyclohydrolase subunit moaa 1854778..1855761 Calditerrivibrio nitroreducens DSM 19672 10009835 YP_004051864.1 CDS Calni_1796 NC_014758.1 1855763 1857016 D COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: ddf:DEFDS_2142 hypothetical protein; PFAM: Protein of unknown function DUF2088; SPTR: uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088); hypothetical protein 1855763..1857016 Calditerrivibrio nitroreducens DSM 19672 10009836 YP_004051865.1 CDS Calni_1797 NC_014758.1 1857085 1858218 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: saf:SULAZ_0355 spore coat polysaccharide biosynthesis protein SpsC; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Spore coat polysaccharide biosynthesis protein SpsC; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; degt/dnrj/eryc1/strs aminotransferase complement(1857085..1858218) Calditerrivibrio nitroreducens DSM 19672 10009837 YP_004051866.1 CDS Calni_1798 NC_014758.1 1858239 1859324 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: dvl:Dvul_2647 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; degt/dnrj/eryc1/strs aminotransferase complement(1858239..1859324) Calditerrivibrio nitroreducens DSM 19672 10009838 YP_004051867.1 CDS Calni_1799 NC_014758.1 1859326 1860324 R COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: taf:THA_864 succinoglycan biosynthesis protein ExoA; PFAM: glycosyl transferase family 2; SPTR: Succinoglycan biosynthesis protein ExoA; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(1859326..1860324) Calditerrivibrio nitroreducens DSM 19672 10009839 YP_004051868.1 CDS Calni_1800 NC_014758.1 1860314 1861357 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: lch:Lcho_0296 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1860314..1861357) Calditerrivibrio nitroreducens DSM 19672 10009840 YP_004051869.1 CDS Calni_1801 NC_014758.1 1861354 1862565 R InterPro IPR001296; KEGG: cce:Ccel_2930 TPR/glycosyl transferase domain-containing protein; PFAM: glycosyl transferase group 1; SPTR: TPR/glycosyl transferase domain-containing protein; group 1 glycosyl transferase complement(1861354..1862565) Calditerrivibrio nitroreducens DSM 19672 10009841 YP_004051870.1 CDS Calni_1802 NC_014758.1 1862569 1863126 R COGs: COG0110 acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: sse:Ssed_2968 acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; SPTR: Capsular polysaccharide synthesis enzyme CapJ; PFAM: Bacterial transferase hexapeptide (three repeats); transferase hexapeptide repeat containing protein complement(1862569..1863126) Calditerrivibrio nitroreducens DSM 19672 10009842 YP_004051871.1 CDS Calni_1803 NC_014758.1 1863110 1864357 R InterPro IPR002797; KEGG: glo:Glov_1503 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1863110..1864357) Calditerrivibrio nitroreducens DSM 19672 10009843 YP_004051872.1 CDS Calni_1804 NC_014758.1 1864350 1865459 R COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: abu:Abu_0692 hexose epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(1864350..1865459) Calditerrivibrio nitroreducens DSM 19672 10009844 YP_004051873.1 CDS Calni_1805 NC_014758.1 1865468 1866118 R COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: glo:Glov_1509 transferase hexapeptide repeat containing protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein; PFAM: Bacterial transferase hexapeptide (three repeats); transferase hexapeptide repeat containing protein complement(1865468..1866118) Calditerrivibrio nitroreducens DSM 19672 10009845 YP_004051874.1 CDS Calni_1806 NC_014758.1 1866139 1867101 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: wsu:WS2188 oxidoreductase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: OXIDOREDUCTASE; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(1866139..1867101) Calditerrivibrio nitroreducens DSM 19672 10009846 YP_004051875.1 CDS Calni_1807 NC_014758.1 1867191 1869782 D InterPro IPR010916: IPR001440: IPR019734: IPR013026; KEGG: ddf:DEFDS_0831 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: uncharacterized protein; tetratricopeptide tpr_1 repeat-containing protein 1867191..1869782 Calditerrivibrio nitroreducens DSM 19672 10009847 YP_004051876.1 CDS Calni_1808 NC_014758.1 1869761 1870879 D COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003661: IPR003594: IPR005467: IPR004358; KEGG: ddf:DEFDS_0833 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Two-component sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 1869761..1870879 Calditerrivibrio nitroreducens DSM 19672 10009848 YP_004051877.1 CDS Calni_1809 NC_014758.1 1870881 1872293 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR002197: IPR003593: IPR 020441; KEGG: dap:Dacet_2320 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator 1870881..1872293 Calditerrivibrio nitroreducens DSM 19672 10009849 YP_004051878.1 CDS Calni_1810 NC_014758.1 1872469 1873287 D COGs: COG0253 Diaminopimelate epimerase; InterPro IPR018510: IPR001653; KEGG: ddf:DEFDS_0214 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase 1872469..1873287 Calditerrivibrio nitroreducens DSM 19672 10009850 YP_004051879.1 CDS Calni_1811 NC_014758.1 1873304 1874185 D COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR020624: IPR020625: IPR002220: IPR005263; KEGG: ddf:DEFDS_0215 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 1873304..1874185 Calditerrivibrio nitroreducens DSM 19672 10009851 YP_004051880.1 CDS Calni_1812 NC_014758.1 1874188 1874991 D COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR000846: IPR011770; KEGG: ddf:DEFDS_0216 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 1874188..1874991 Calditerrivibrio nitroreducens DSM 19672 10009852 YP_004051881.1 CDS Calni_1813 NC_014758.1 1875047 1875550 R COGs: COG2077 Peroxiredoxin; InterPro IPR017936: IPR018219: IPR013740; KEGG: hya:HY04AAS1_0035 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin; thiol peroxidase (atypical 2-cys peroxiredoxin) complement(1875047..1875550) Calditerrivibrio nitroreducens DSM 19672 10009853 YP_004051882.1 CDS Calni_1814 NC_014758.1 1875598 1877304 R InterPro IPR001041; KEGG: ddf:DEFDS_2025 hypothetical protein; PFAM: ferredoxin; SPTR: uncharacterized protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; ferredoxin complement(1875598..1877304) Calditerrivibrio nitroreducens DSM 19672 10009854 YP_004051883.1 CDS Calni_1815 NC_014758.1 1877307 1878050 R COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: ddf:DEFDS_2026 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein, paat family complement(1877307..1878050) Calditerrivibrio nitroreducens DSM 19672 10009855 YP_004051884.1 CDS Calni_1816 NC_014758.1 1878043 1878990 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065: IPR000515; KEGG: ddf:DEFDS_2027 amino acid ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter membrane protein complement(1878043..1878990) Calditerrivibrio nitroreducens DSM 19672 10009856 YP_004051885.1 CDS Calni_1817 NC_014758.1 1879009 1879815 R COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001320: IPR001638: IPR018313; KEGG: dap:Dacet_2157 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: Extracellular solute-binding protein family 3; PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein, paat family complement(1879009..1879815) Calditerrivibrio nitroreducens DSM 19672 10009857 YP_004051886.1 CDS Calni_1818 NC_014758.1 1879837 1880016 R KEGG: ddf:DEFDS_2029 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1879837..1880016) Calditerrivibrio nitroreducens DSM 19672 10009858 YP_004051887.1 CDS Calni_1819 NC_014758.1 1880501 1881169 R COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644: IPR002912; KEGG: ddf:DEFDS_1490 CBS domain containing protein; PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein; SPTR: CBS domain containing protein; PFAM: CBS domain; ACT domain; CBS domain-containing membrane protein complement(1880501..1881169) Calditerrivibrio nitroreducens DSM 19672 10009859 YP_004051888.1 CDS Calni_1820 NC_014758.1 1881185 1882315 R COGs: COG1541 Coenzyme F390 synthetase; KEGG: ddf:DEFDS_1491 phenylacetate-CoA ligase; SPTR: Phenylacetate-CoA ligase; PFAM: AMP-binding enzyme; phenylacetate-CoA ligase complement(1881185..1882315) Calditerrivibrio nitroreducens DSM 19672 10009860 YP_004051889.1 CDS Calni_1821 NC_014758.1 1882303 1883088 R COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: ddf:DEFDS_1492 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter; amino acid/amide ABC transporter ATP-binding protein 2, haat family complement(1882303..1883088) Calditerrivibrio nitroreducens DSM 19672 10009861 YP_004051890.1 CDS Calni_1822 NC_014758.1 1883139 1884275 R COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709: IPR010916: IPR001828; KEGG: ddf:DEFDS_1493 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; PFAM: Receptor family ligand binding region; extracellular ligand-binding receptor complement(1883139..1884275) Calditerrivibrio nitroreducens DSM 19672 10009862 YP_004051891.1 CDS Calni_1823 NC_014758.1 1884299 1885351 R COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ddf:DEFDS_1494 branched-chain amino acid ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1884299..1885351) Calditerrivibrio nitroreducens DSM 19672 10009863 YP_004051892.1 CDS Calni_1824 NC_014758.1 1885348 1886232 R COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: ddf:DEFDS_1495 branched-chain amino acid ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; PFAM: Branched-chain amino acid transport system / permease component; amino acid/amide ABC transporter membrane protein 1, haat family complement(1885348..1886232) Calditerrivibrio nitroreducens DSM 19672 10009864 YP_004051893.1 CDS Calni_1825 NC_014758.1 1886240 1888123 R COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR020845: IPR000873; KEGG: ddf:DEFDS_1496 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Long-chain fatty-acid-CoA ligase; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase complement(1886240..1888123) Calditerrivibrio nitroreducens DSM 19672 10009865 YP_004051894.1 CDS Calni_1826 NC_014758.1 1888114 1888887 R COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: ddf:DEFDS_1497 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid/amide ABC transporter ATP-binding protein 1, haat family complement(1888114..1888887) Calditerrivibrio nitroreducens DSM 19672 10009866 YP_004051895.1 CDS Calni_1827 NC_014758.1 1889133 1891040 R COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: pmx:PERMA_0406 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: Oligopeptidase A; PFAM: Peptidase family M3; oligopeptidase a complement(1889133..1891040) Calditerrivibrio nitroreducens DSM 19672 10009867 YP_004051896.1 CDS Calni_1828 NC_014758.1 1891048 1891713 R KEGG: ddf:DEFDS_0072 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1891048..1891713) Calditerrivibrio nitroreducens DSM 19672 10009868 YP_004051897.1 CDS Calni_1829 NC_014758.1 1891715 1893241 R COGs: COG4399 conserved hypothetical protein; InterPro IPR007383; KEGG: ddf:DEFDS_1931 hypothetical protein; PFAM: protein of unknown function DUF445; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF445); hypothetical protein complement(1891715..1893241) Calditerrivibrio nitroreducens DSM 19672 10009869 YP_004051898.1 CDS Calni_1830 NC_014758.1 1893225 1894130 R COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: ddf:DEFDS_1930 phosphatase Ppx/GppA family; PFAM: Ppx/GppA phosphatase; SPTR: Phosphatase, Ppx/GppA family; PFAM: Ppx/GppA phosphatase family; ppx/gppa phosphatase complement(1893225..1894130) Calditerrivibrio nitroreducens DSM 19672 10009870 YP_004051899.1 CDS Calni_1831 NC_014758.1 1894132 1894800 R COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: ddf:DEFDS_1607 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator complement(1894132..1894800) Calditerrivibrio nitroreducens DSM 19672 10009871 YP_004051900.1 CDS Calni_1832 NC_014758.1 1894797 1895471 R COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: ddf:DEFDS_1608 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator complement(1894797..1895471) Calditerrivibrio nitroreducens DSM 19672 10009872 YP_004051901.1 CDS Calni_1833 NC_014758.1 1895583 1896404 R COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: dap:Dacet_0875 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1895583..1896404) Calditerrivibrio nitroreducens DSM 19672 10009873 YP_004051902.1 CDS Calni_1834 NC_014758.1 1896404 1897216 R KEGG: ddf:DEFDS_0696 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1896404..1897216) Calditerrivibrio nitroreducens DSM 19672 10009874 YP_004051903.1 CDS Calni_1835 NC_014758.1 1897320 1898996 R COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR002178: IPR006153; KEGG: npu:Npun_R6387 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: Probable Na/H antiporter; PFAM: Sodium/hydrogen exchanger family; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; sodium/hydrogen exchanger complement(1897320..1898996) Calditerrivibrio nitroreducens DSM 19672 10009875 YP_004051904.1 CDS Calni_1836 NC_014758.1 1899015 1901093 R COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054: IPR007890; KEGG: pmx:PERMA_0988 adenylate cyclase; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain; adenylate/guanylate cyclase with chase sensor complement(1899015..1901093) Calditerrivibrio nitroreducens DSM 19672 10009876 YP_004051905.1 CDS Calni_1837 NC_014758.1 1901110 1902333 R COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: ddf:DEFDS_1640 hypothetical protein; PFAM: protein of unknown function DUF111; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF111; TIGRFAM: conserved hypothetical protein TIGR00299; hypothetical protein complement(1901110..1902333) Calditerrivibrio nitroreducens DSM 19672 10009877 YP_004051906.1 CDS Calni_1838 NC_014758.1 1902509 1905343 D COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR017896: IPR016166: IPR017900: IPR006094: IPR 004113: IPR004017; KEGG: ddf:DEFDS_1394 oxidoreductase; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Oxidoreductase; PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; fad linked oxidase domain-containing protein 1902509..1905343 Calditerrivibrio nitroreducens DSM 19672 10009878 YP_004051907.1 CDS Calni_1839 NC_014758.1 1905340 1906566 D KEGG: ddf:DEFDS_1393 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1905340..1906566 Calditerrivibrio nitroreducens DSM 19672 10009879 YP_004051908.1 CDS Calni_1840 NC_014758.1 1906563 1907879 D COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR005839: IPR006463: IPR006638: IPR002792: IPR 013848: IPR020612: IPR007197; KEGG: ddf:DEFDS_1391 tRNA-i(6)A37 thiotransferase enzyme; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA-i(6)A37 thiotransferase enzyme; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; tRNA-i(6)a37 thiotransferase enzyme miab 1906563..1907879 Calditerrivibrio nitroreducens DSM 19672 10009880 YP_004051909.1 CDS Calni_1841 NC_014758.1 1907876 1908349 D COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: ddf:DEFDS_1390 hypothetical protein; PFAM: protein of unknown function DUF151; SPTR: uncharacterized protein; PFAM: Uncharacterised ACR, COG1259; hypothetical protein 1907876..1908349 Calditerrivibrio nitroreducens DSM 19672 10009881 YP_004051910.1 CDS Calni_1842 NC_014758.1 1908359 1909108 D COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: ddf:DEFDS_1398 hypothetical protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: uncharacterized protein; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase 1908359..1909108 Calditerrivibrio nitroreducens DSM 19672 10009882 YP_004051911.1 CDS Calni_1843 NC_014758.1 1909098 1909439 D KEGG: ddf:DEFDS_1397 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1909098..1909439 Calditerrivibrio nitroreducens DSM 19672 10009883 YP_004051912.1 CDS Calni_1844 NC_014758.1 1909445 1910119 D COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: dde:Dde_0679 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese-like; PFAM: Rhodanese-like domain; rhodanese domain-containing protein 1909445..1910119 Calditerrivibrio nitroreducens DSM 19672 10009884 YP_004051913.1 CDS Calni_1845 NC_014758.1 1910217 1911608 D COGs: COG0469 Pyruvate kinase; InterPro IPR001697: IPR015793: IPR018209: IPR015794; KEGG: pmx:PERMA_0022 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 1910217..1911608 Calditerrivibrio nitroreducens DSM 19672 10009885 YP_004051914.1 CDS Calni_1846 NC_014758.1 1911773 1912009 D KEGG: mhu:Mhun_1397 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1911773..1912009 Calditerrivibrio nitroreducens DSM 19672 10009886 YP_004051915.1 CDS Calni_1847 NC_014758.1 1912195 1912692 D InterPro IPR010916; KEGG: bss:BSUW23_12590 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1912195..1912692 Calditerrivibrio nitroreducens DSM 19672 10009887 YP_004051916.1 CDS Calni_1848 NC_014758.1 1913065 1913421 D COGs: COG2314 membrane protein; KEGG: pha:PSHAa1483 hypothetical protein; SPTR: TM2; PFAM: TM2 domain; hypothetical protein 1913065..1913421 Calditerrivibrio nitroreducens DSM 19672 10009888 YP_004051917.1 CDS Calni_1850 NC_014758.1 1913677 1915032 R COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: dol:Dole_2093 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: Type I restriction modification DNA specificity domain protein; PFAM: Type I restriction modification DNA specificity domain; restriction modification system DNA specificity domain complement(1913677..1915032) Calditerrivibrio nitroreducens DSM 19672 10009890 YP_004051918.1 CDS Calni_1851 NC_014758.1 1915029 1916429 R COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002296: IPR002052: IPR003356; KEGG: mbn:Mboo_1031 N-6 DNA methylase; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: N-6 DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; site-specific DNA-methyltransferase (adenine-specific) complement(1915029..1916429) Calditerrivibrio nitroreducens DSM 19672 10009891 YP_004051919.1 CDS Calni_1852 NC_014758.1 1916443 1916901 R KEGG: pth:PTH_0697 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1916443..1916901) Calditerrivibrio nitroreducens DSM 19672 10009892 YP_004051920.1 CDS Calni_1853 NC_014758.1 1916901 1919594 R COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001: IPR014021: IPR001650: IPR007409: IPR 006935; KEGG: dol:Dole_2096 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; helicase domain protein; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: Type III restriction protein res subunit; manually curated; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3559); type I site-specific deoxyribonuclease complement(1916901..1919594) Calditerrivibrio nitroreducens DSM 19672 10009893 YP_004051921.1 CDS Calni_1854 NC_014758.1 1919584 1919928 R KEGG: slt:Slit_1091 type III restriction protein res subunit; SPTR: Type III restriction protein res subunit; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); type III restriction protein res subunit complement(1919584..1919928) Calditerrivibrio nitroreducens DSM 19672 10009894 YP_004051922.1 CDS Calni_1855 NC_014758.1 1920102 1921634 R InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_0353 hypothetical protein; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA complement(1920102..1921634) Calditerrivibrio nitroreducens DSM 19672 10009895 YP_004051923.1 CDS Calni_1856 NC_014758.1 1921941 1923371 D COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: chy:CHY_0075 amino acid carrier protein; PFAM: sodium:alanine symporter; SPTR: Amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; amino acid carrier protein 1921941..1923371 Calditerrivibrio nitroreducens DSM 19672 10009896 YP_004051924.1 CDS Calni_1857 NC_014758.1 1923404 1924078 R COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: ddf:DEFDS_0585 hypothetical protein; PFAM: hypothetical protein; SPTR: uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2; hypothetical protein complement(1923404..1924078) Calditerrivibrio nitroreducens DSM 19672 10009897 YP_004051925.1 CDS Calni_1858 NC_014758.1 1924088 1924717 R COGs: COG0288 Carbonic anhydrase; InterPro IPR015892: IPR001765; KEGG: sul:SYO3AOP1_1765 carbonate dehydratase; PFAM: carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: Carbonic anhydrase; PFAM: Carbonic anhydrase; carbonate dehydratase complement(1924088..1924717) Calditerrivibrio nitroreducens DSM 19672 10009898 YP_004051926.1 CDS Calni_1859 NC_014758.1 1924856 1925896 D COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006219: IPR006218; KEGG: gme:Gmet_2375 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 1924856..1925896 Calditerrivibrio nitroreducens DSM 19672 10009899 YP_004051927.1 CDS Calni_1860 NC_014758.1 1925980 1926642 D COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR003141: IPR004013; KEGG: ddf:DEFDS_0779 hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: uncharacterized protein; PFAM: PHP domain; php domain-containing protein 1925980..1926642 Calditerrivibrio nitroreducens DSM 19672 10009900 YP_004051928.1 CDS Calni_1861 NC_014758.1 1926635 1927183 D KEGG: ddf:DEFDS_0780 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1926635..1927183 Calditerrivibrio nitroreducens DSM 19672 10009901 YP_004051929.1 CDS Calni_1862 NC_014758.1 1927187 1928920 D COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits; InterPro IPR017721: IPR017896: IPR002880: IPR011766; KEGG: ddf:DEFDS_0781 indolepyruvate ferredoxin oxidoreductase subunit alpha; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: Indolepyruvate ferredoxin oxidoreductase, alpha subunit; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; indolepyruvate ferredoxin oxidoreductase subunit alpha 1927187..1928920 Calditerrivibrio nitroreducens DSM 19672 10009902 YP_004051930.1 CDS Calni_1863 NC_014758.1 1928920 1929501 D COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: dap:Dacet_1341 pyruvate/ketoisovalerate oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: Pyruvate/ketoisovalerate oxidoreductase; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; indolepyruvate ferredoxin oxidoreductase 1928920..1929501 Calditerrivibrio nitroreducens DSM 19672 10009903 YP_004051931.1 CDS Calni_1864 NC_014758.1 1929503 1930531 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003661: IPR003594: IPR005467: IPR004358; KEGG: ddf:DEFDS_2133 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 1929503..1930531 Calditerrivibrio nitroreducens DSM 19672 10009904 YP_004051932.1 CDS Calni_1865 NC_014758.1 1930515 1933370 D COGs: COG1391 Glutamine synthetase adenylyltransferase; InterPro IPR005190: IPR013546; KEGG: ddf:DEFDS_2134 glutamate-ammonia ligase adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; PRIAM: [Glutamate--ammonia-ligase] adenylyltransferase; SPTR: Glutamate-ammonia ligase adenylyltransferase; PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 1930515..1933370 Calditerrivibrio nitroreducens DSM 19672 10009905 YP_004051933.1 CDS Calni_1866 NC_014758.1 1933367 1933924 D COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733; KEGG: ddf:DEFDS_2135 hypothetical protein; PFAM: thiamine monophosphate synthase; SPTR: uncharacterized protein; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase 1933367..1933924 Calditerrivibrio nitroreducens DSM 19672 10009906 YP_004051934.1 CDS Calni_1867 NC_014758.1 1933963 1934505 R KEGG: ddf:DEFDS_1682 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1933963..1934505) Calditerrivibrio nitroreducens DSM 19672 10009907 YP_004051935.1 CDS Calni_1868 NC_014758.1 1934725 1935114 R KEGG: ddf:DEFDS_0913 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1934725..1935114) Calditerrivibrio nitroreducens DSM 19672 10009909 YP_004051936.1 CDS Calni_1869 NC_014758.1 1935319 1937532 R COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041: IPR017896: IPR017900: IPR000283: IPR 019574: IPR006963: IPR006656; KEGG: ddf:DEFDS_1612 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; NADH:ubiquinone oxidoreductase, subunit g, iron-sulfur binding protein complement(1935319..1937532) Calditerrivibrio nitroreducens DSM 19672 10009910 YP_004051937.1 CDS Calni_1870 NC_014758.1 1937552 1939492 R COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR000759: IPR013027; KEGG: ddf:DEFDS_1613 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; fad-dependent pyridine nucleotide-disulfide oxidoreductase complement(1937552..1939492) Calditerrivibrio nitroreducens DSM 19672 10009911 YP_004051938.1 CDS Calni_1871 NC_014758.1 1939808 1940179 D InterPro IPR011031; KEGG: dap:Dacet_0085 hypothetical protein; SPTR: uncharacterized protein; PFAM: NapC/NirT cytochrome c family, N-terminal region; hypothetical protein 1939808..1940179 Calditerrivibrio nitroreducens DSM 19672 10009912 YP_004051939.1 CDS Calni_1872 NC_014758.1 1940195 1942582 D COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006311: IPR017909: IPR006655: IPR019546: IPR 006963: IPR006656: IPR006657; KEGG: ddf:DEFDS_1820 periplasmic nitrate reductase NapA; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; SPTR: Periplasmic nitrate reductase NapA; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: periplasmic nitrate reductase, large subunit; Tat (twin-arginine translocation) pathway signal sequence; periplasmic nitrate reductase subunit napa apoprotein 1940195..1942582 Calditerrivibrio nitroreducens DSM 19672 10009913 YP_004051940.1 CDS Calni_1873 NC_014758.1 1942648 1942980 D KEGG: dap:Dacet_0087 hypothetical protein; SPTR: uncharacterized protein; PFAM: NapD protein; hypothetical protein 1942648..1942980 Calditerrivibrio nitroreducens DSM 19672 10009914 YP_004051941.1 CDS Calni_1874 NC_014758.1 1942970 1943719 D InterPro IPR017896: IPR017900; KEGG: ddf:DEFDS_1822 periplasmic nitrate reductase NapG; SPTR: Periplasmic nitrate reductase NapG; PFAM: 4Fe-4S binding domain; TIGRFAM: MauM/NapG family ferredoxin-type protein; periplasmic nitrate reductase subunit napg 1942970..1943719 Calditerrivibrio nitroreducens DSM 19672 10009915 YP_004051942.1 CDS Calni_1875 NC_014758.1 1943721 1944515 D COGs: COG0348 Polyferredoxin; InterPro IPR017896: IPR017900; KEGG: dap:Dacet_0089 NapH; SPTR: NapH; TIGRFAM: ferredoxin-type protein, NapH/MauN family; ferredoxin-type protein, naph/maun family 1943721..1944515 Calditerrivibrio nitroreducens DSM 19672 10009916 YP_004051943.1 CDS Calni_1876 NC_014758.1 1944533 1946197 R COGs: COG4585 Signal transduction histidine kinase; InterPro IPR005467: IPR003594; KEGG: slt:Slit_1594 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: Signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(1944533..1946197) Calditerrivibrio nitroreducens DSM 19672 10009917 YP_004051944.1 CDS Calni_1877 NC_014758.1 1946194 1946823 R COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: dba:Dbac_2295 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator complement(1946194..1946823) Calditerrivibrio nitroreducens DSM 19672 10009918 YP_004051945.1 CDS Calni_1878 NC_014758.1 1946956 1947501 R KEGG: bhy:BHWA1_00756 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1946956..1947501) Calditerrivibrio nitroreducens DSM 19672 10009919 YP_004051946.1 CDS Calni_1879 NC_014758.1 1947904 1949805 D COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: ddf:DEFDS_0532 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor plug 1947904..1949805 Calditerrivibrio nitroreducens DSM 19672 10009920 YP_004051947.1 CDS Calni_1880 NC_014758.1 1949810 1950658 D COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: ddf:DEFDS_0533 iron ABC transporter substrate-binding protein; PFAM: periplasmic binding protein; SPTR: Iron ABC transporter, substrate-binding protein; PFAM: Periplasmic binding protein; periplasmic binding protein 1949810..1950658 Calditerrivibrio nitroreducens DSM 19672 10009921 YP_004051948.1 CDS Calni_1881 NC_014758.1 1950655 1951620 D COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ddf:DEFDS_0535 iron ABC transporter permease; PFAM: transport system permease protein; SPTR: Iron ABC transporter, permease; PFAM: FecCD transport family; transport system permease 1950655..1951620 Calditerrivibrio nitroreducens DSM 19672 10009922 YP_004051949.1 CDS Calni_1882 NC_014758.1 1951620 1952441 D COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593: IPR003439: IPR017871; KEGG: ddf:DEFDS_0536 iron ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Iron ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter 1951620..1952441 Calditerrivibrio nitroreducens DSM 19672 10009923 YP_004051950.1 CDS Calni_1883 NC_014758.1 1952422 1953180 D InterPro IPR006260; KEGG: hya:HY04AAS1_0708 TonB family protein; PFAM: TonB domain; SPTR: TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; tonb family protein 1952422..1953180 Calditerrivibrio nitroreducens DSM 19672 10009924 YP_004051951.1 CDS Calni_1884 NC_014758.1 1953177 1953896 D InterPro IPR012307; KEGG: ddf:DEFDS_2052 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein tim barrel 1953177..1953896 Calditerrivibrio nitroreducens DSM 19672 10009925 YP_004051952.1 CDS Calni_1885 NC_014758.1 1953868 1954386 D COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: ddf:DEFDS_2051 adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; PRIAM: Adenosylcobinamide-phosphate guanylyltransferase; SPTR: Adenosylcobinamide-phosphate guanylyltransferase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; adenosylcobinamide-phosphate guanylyl transferase 1953868..1954386 Calditerrivibrio nitroreducens DSM 19672 10009926 YP_004051953.1 CDS Calni_1886 NC_014758.1 1954376 1954645 D COGs: COG2158 Uncharacterized protein containing a Zn-finger-like domain; InterPro IPR007212; KEGG: ddf:DEFDS_0185 hypothetical protein; PFAM: cysteine-rich small domain; SPTR: uncharacterized protein; PFAM: Cysteine-rich small domain; hypothetical protein 1954376..1954645 Calditerrivibrio nitroreducens DSM 19672 10009927 YP_004051954.1 CDS Calni_1887 NC_014758.1 1954642 1955703 D COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR017846: IPR003200; KEGG: ddf:DEFDS_2050 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PRIAM: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; SPTR: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1954642..1955703 Calditerrivibrio nitroreducens DSM 19672 10009928 YP_004051955.1 CDS Calni_1888 NC_014758.1 1955700 1956404 D COGs: COG0368 Cobalamin-5-phosphate synthase; InterPro IPR003805; KEGG: ddf:DEFDS_2049 adenosylcobinamide-GDP ribazoletransferase; PFAM: cobalamin-5-phosphate synthase CobS; SPTR: Cobalamin synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase; cobalamin 5'-phosphate synthase 1955700..1956404 Calditerrivibrio nitroreducens DSM 19672 10009929 YP_004051956.1 CDS Calni_1889 NC_014758.1 1956417 1956965 D KEGG: sul:SYO3AOP1_0737 TonB family protein; SPTR: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; hypothetical protein 1956417..1956965 Calditerrivibrio nitroreducens DSM 19672 10009930 YP_004051957.1 CDS Calni_1890 NC_014758.1 1957106 1958419 D InterPro IPR002559; KEGG: sso:SSO1775 transposase ISC1359; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4 family protein; PFAM: Transposase DDE domain; transposase is4 family protein 1957106..1958419 Calditerrivibrio nitroreducens DSM 19672 10009931 YP_004051958.1 CDS Calni_1891 NC_014758.1 1958513 1959544 D COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506; KEGG: ddf:DEFDS_1156 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase 1958513..1959544 Calditerrivibrio nitroreducens DSM 19672 10009932 YP_004051959.1 CDS Calni_1892 NC_014758.1 1959528 1960229 D COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; KEGG: ddf:DEFDS_1637 hypothetical protein; SPTR: uncharacterized protein; PFAM: NAD synthase; TIGRFAM: conserved hypothetical protein TIGR00268; hypothetical protein 1959528..1960229 Calditerrivibrio nitroreducens DSM 19672 10009933 YP_004051960.1 CDS Calni_1893 NC_014758.1 1960250 1961572 R COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027: IPR000103: IPR004099; KEGG: ddf:DEFDS_1684 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; fad-dependent pyridine nucleotide-disulfide oxidoreductase complement(1960250..1961572) Calditerrivibrio nitroreducens DSM 19672 10009934 YP_004051961.1 CDS Calni_1894 NC_014758.1 1961598 1962266 R COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: pmx:PERMA_0680 macrolide export ATP-binding/permease protein MacB; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Macrolide export ATP-binding/permease protein MacB; PFAM: ABC transporter; ABC transporter complement(1961598..1962266) Calditerrivibrio nitroreducens DSM 19672 10009935 YP_004051962.1 CDS Calni_1895 NC_014758.1 1962269 1963534 R COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: pmx:PERMA_0681 secretion protein HlyD; PFAM: secretion protein HlyD family protein; SPTR: Secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter, rnd family, mfp subunit complement(1962269..1963534) Calditerrivibrio nitroreducens DSM 19672 10009936 YP_004051963.1 CDS Calni_1896 NC_014758.1 1963531 1964769 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: pmx:PERMA_1479 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(1963531..1964769) Calditerrivibrio nitroreducens DSM 19672 10009937 YP_004051964.1 CDS Calni_1897 NC_014758.1 1964815 1965570 R COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: ddf:DEFDS_2161 hypothetical protein; SPTR: uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily; hypothetical protein complement(1964815..1965570) Calditerrivibrio nitroreducens DSM 19672 10009938 YP_004051965.1 CDS Calni_1898 NC_014758.1 1965699 1966265 D InterPro IPR001647; KEGG: ddf:DEFDS_0614 TetR/AcrR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR/AcrR family; PFAM: Bacterial regulatory proteins, tetR family; regulatory protein tetr 1965699..1966265 Calditerrivibrio nitroreducens DSM 19672 10009939 YP_004051966.1 CDS Calni_1899 NC_014758.1 1966268 1967551 D COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ddf:DEFDS_0615 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: uncharacterized protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein 1966268..1967551 Calditerrivibrio nitroreducens DSM 19672 10009940 YP_004051967.1 CDS Calni_1900 NC_014758.1 1967551 1968678 D COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR003997: IPR006143; KEGG: ddf:DEFDS_0616 multidrug-efflux transporter MFP family; PFAM: secretion protein HlyD family protein; SPTR: Multidrug-efflux transporter, MFP family; PFAM: HlyD family secretion protein; secretion protein hlyd family protein 1967551..1968678 Calditerrivibrio nitroreducens DSM 19672 10009941 YP_004051968.1 CDS Calni_1901 NC_014758.1 1968724 1970292 D COGs: COG2814 Arabinose efflux permease; InterPro IPR004638: IPR011701; KEGG: ddf:DEFDS_0617 multidrug-efflux transporter MFS family; PFAM: major facilitator superfamily MFS_1; SPTR: Multidrug-efflux transporter, MFS family; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 1968724..1970292 Calditerrivibrio nitroreducens DSM 19672 10009942 YP_004051969.1 CDS Calni_1902 NC_014758.1 1970312 1970773 R KEGG: gur:Gura_3461 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1970312..1970773) Calditerrivibrio nitroreducens DSM 19672 10009943 YP_004051970.1 CDS Calni_1903 NC_014758.1 1970912 1972147 R COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterPro IPR003661: IPR003594: IPR005467: IPR004358; KEGG: ddf:DEFDS_2112 two-component system, NtrC family, sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Two-component system, NtrC family, sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase, nitrogen specific, ntrb complement(1970912..1972147) Calditerrivibrio nitroreducens DSM 19672 10009944 YP_004051971.1 CDS Calni_1904 NC_014758.1 1972328 1973041 D COGs: COG0450 Peroxiredoxin; InterPro IPR017936: IPR000866: IPR019479; KEGG: cts:Ctha_1656 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; PRIAM: Peroxiredoxin; SPTR: Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; 3-cys thioredoxin peroxidase 1972328..1973041 Calditerrivibrio nitroreducens DSM 19672 10009945 YP_004051972.1 CDS Calni_1905 NC_014758.1 1973078 1973515 R COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: ccb:Clocel_1085 dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(1973078..1973515) Calditerrivibrio nitroreducens DSM 19672 10009946 YP_004051973.1 CDS Calni_1906 NC_014758.1 1973655 1974044 R COGs: COG1342 DNA-binding protein; InterPro IPR002852; KEGG: plt:Plut_0906 hypothetical protein; PFAM: protein of unknown function DUF134; SPTR: uncharacterized protein; PFAM: Protein of unknown function DUF134; hypothetical protein complement(1973655..1974044) Calditerrivibrio nitroreducens DSM 19672 10009947 YP_004051974.1 CDS Calni_1907 NC_014758.1 1974300 1977056 D COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR000014: IPR001638: IPR003661: IPR003594: IPR 001789: IPR005467: IPR004358: IPR013656: IPR013767; KEGG: ddf:DEFDS_1294 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; PAS domain containing protein; histidine kinase A domain protein; response regulator receiver; SPTR: uncharacterized protein; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 1974300..1977056 Calditerrivibrio nitroreducens DSM 19672 10009949 YP_004051975.1 CDS Calni_1908 NC_014758.1 1977128 1978531 D COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814; KEGG: mar:MAE_38610 McyE protein; PFAM: aminotransferase class-III; SPTR: Amino acid adenylation; PFAM: Aminotransferase class-III; aminotransferase class-iii 1977128..1978531 Calditerrivibrio nitroreducens DSM 19672 10009950 YP_004051976.1 CDS Calni_1909 NC_014758.1 1978547 1978861 D COGs: COG0011 conserved hypothetical protein; InterPro IPR002767; KEGG: saf:SULAZ_1255 hypothetical protein; PFAM: protein of unknown function DUF77; SPTR: uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family; hypothetical protein 1978547..1978861 Calditerrivibrio nitroreducens DSM 19672 10009951 YP_004051977.1 CDS Calni_1910 NC_014758.1 1978915 1979886 D COGs: COG2378 transcriptional regulator protein; KEGG: pca:Pcar_0955 transcriptional regulator; SPTR: uncharacterized protein; transcriptional regulator 1978915..1979886 Calditerrivibrio nitroreducens DSM 19672 10009952 YP_004051978.1 CDS Calni_1911 NC_014758.1 1979958 1980347 D InterPro IPR014905; KEGG: dar:Daro_0502 hypothetical protein; PFAM: HIRAN; SPTR: uncharacterized protein; PFAM: HIRAN domain; hiran domain-containing protein 1979958..1980347 Calditerrivibrio nitroreducens DSM 19672 10009953 YP_004051979.1 CDS Calni_1912 NC_014758.1 1980415 1981209 D COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR010156: IPR002743; KEGG: tye:THEYE_A2043 CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; SPTR: CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6; crispr-associated protein cas6 1980415..1981209 Calditerrivibrio nitroreducens DSM 19672 10009954 YP_004051980.1 CDS Calni_1913 NC_014758.1 1981202 1982665 D KEGG: ate:Athe_0122 CRISPR-associated CXXC_CXXC protein Cst1; SPTR: uncharacterized protein; hypothetical protein 1981202..1982665 Calditerrivibrio nitroreducens DSM 19672 10009955 YP_004051981.1 CDS Calni_1914 NC_014758.1 1982679 1984094 D InterPro IPR010154; KEGG: tpt:Tpet_1086 CRISPR-associated autoregulator DevR family protein protein; SPTR: CRISPR-associated autoregulator DevR family; TIGRFAM: CRISPR-associated autoregulator DevR family; PFAM: CRISPR-associated negative autoregulator DevR/Csa2; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; crispr-associated autoregulator devr family 1982679..1984094 Calditerrivibrio nitroreducens DSM 19672 10009956 YP_004051982.1 CDS Calni_1915 NC_014758.1 1984116 1984790 D InterPro IPR013422; KEGG: amt:Amet_2192 CRISPR-associated Cas5 family protein; SPTR: CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; crispr-associated protein cas5 1984116..1984790 Calditerrivibrio nitroreducens DSM 19672 10009957 YP_004051983.1 CDS Calni_1916 NC_014758.1 1984774 1987080 D COGs: COG1203 helicase; InterPro IPR006483: IPR006474: IPR014001: IPR001650: IPR 014021; KEGG: pmx:PERMA_1338 crispr-associated helicase Cas3; SMART: DEAD-like helicase; helicase domain protein; SPTR: CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; crispr-associated helicase cas3 1984774..1987080 Calditerrivibrio nitroreducens DSM 19672 10009958 YP_004051984.1 CDS Calni_1918 NC_014758.1 1987496 1988602 D COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: ddf:DEFDS_P121 transposase; PFAM: transposase mutator type; SPTR: Transposase; PFAM: Transposase, Mutator family; transposase mutator type 1987496..1988602 Calditerrivibrio nitroreducens DSM 19672 10009960 YP_004051985.1 CDS Calni_1919 NC_014758.1 1988929 1989909 D COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR019858: IPR002729; KEGG: tye:THEYE_A2036 CRISPR-associated protein Cas1, HMARI/TNEAP subtype; PFAM: protein of unknown function DUF48; SPTR: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; TIGRFAM: CRISPR-associated protein Cas1; manually curated; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype; CRISPR-associated endonuclease Cas1; crispr-associated protein, cas1 family 1988929..1989909 Calditerrivibrio nitroreducens DSM 19672 10009961 YP_004051986.1 CDS Calni_1920 NC_014758.1 1989925 1990188 D COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR021127; KEGG: tye:THEYE_A2034 CRISPR-associated protein Cas2; SPTR: CRISPR-associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; crispr-associated protein, cas2 family 1989925..1990188 Calditerrivibrio nitroreducens DSM 19672 10009962 YP_004051987.1 CDS Calni_1922 NC_014758.1 1991288 1991548 D KEGG: rce:RC1_1125 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1991288..1991548 Calditerrivibrio nitroreducens DSM 19672 10009963 YP_004051988.1 CDS Calni_1923 NC_014758.1 1991545 1991658 D hypothetical protein 1991545..1991658 Calditerrivibrio nitroreducens DSM 19672 10009964 YP_004051989.1 CDS Calni_1924 NC_014758.1 1991847 1992218 D KEGG: bpf:BpOF4_04430 TP901 family phage tail tape measure protein; SPTR: TP901 family phage tail tape measure protein; hypothetical protein 1991847..1992218 Calditerrivibrio nitroreducens DSM 19672 10009965 YP_004051990.1 CDS Calni_1925 NC_014758.1 1992683 1994221 D InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_1269 hypothetical protein; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 1992683..1994221 Calditerrivibrio nitroreducens DSM 19672 10009966 YP_004051991.1 CDS Calni_1926 NC_014758.1 1994459 1995046 R KEGG: dps:DP0875 hypothetical protein; SPTR: uncharacterized protein; PFAM: Aminotransferase class IV; hypothetical protein complement(1994459..1995046) Calditerrivibrio nitroreducens DSM 19672 10009967 YP_004051992.1 CDS Calni_1927 NC_014758.1 1995030 1995998 R COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999: IPR015890; KEGG: ddf:DEFDS_1304 para-aminobenzoate synthase component I; PFAM: Chorismate binding-like; SPTR: Para-aminobenzoate synthase component I; PFAM: chorismate binding enzyme; chorismate binding protein complement(1995030..1995998) Calditerrivibrio nitroreducens DSM 19672 10009968 YP_004051993.1 CDS Calni_1928 NC_014758.1 1996000 1996209 R KEGG: ddf:DEFDS_1297 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1996000..1996209) Calditerrivibrio nitroreducens DSM 19672 10009969 YP_004051994.1 CDS Calni_1929 NC_014758.1 1996202 1996750 R InterPro IPR000086; KEGG: ddf:DEFDS_2172 phosphohydrolase MutT/NUDIX family; PFAM: NUDIX hydrolase; SPTR: Phosphohydrolase, MutT/NUDIX family; PFAM: NUDIX domain; nudix hydrolase complement(1996202..1996750) Calditerrivibrio nitroreducens DSM 19672 10009970 YP_004051995.1 CDS Calni_1930 NC_014758.1 1996750 1997091 R KEGG: ddf:DEFDS_2171 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1996750..1997091) Calditerrivibrio nitroreducens DSM 19672 10009971 YP_004051996.1 CDS Calni_1931 NC_014758.1 1997191 1997961 D COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551: IPR004518; KEGG: ddf:DEFDS_1789 MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; mazg family protein 1997191..1997961 Calditerrivibrio nitroreducens DSM 19672 10009972 YP_004051997.1 CDS Calni_1932 NC_014758.1 1997958 1999790 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594: IPR005467: IPR004358; KEGG: glo:Glov_1550 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(1997958..1999790) Calditerrivibrio nitroreducens DSM 19672 10009973 YP_004051998.1 CDS Calni_1933 NC_014758.1 2005157 2006131 R COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771: IPR011289; KEGG: ddf:DEFDS_0062 fructose-bisphosphate aldolase class II; PFAM: ketose-bisphosphate aldolase class-II; PRIAM: Fructose-bisphosphate aldolase; SPTR: Fructose-bisphosphate aldolase, class II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist; fructose-bisphosphate aldolase complement(2005157..2006131) Calditerrivibrio nitroreducens DSM 19672 10009979 YP_004051999.1 CDS Calni_1934 NC_014758.1 2006144 2007127 R COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; InterPro IPR005251: IPR011559: IPR000649; KEGG: csc:Csac_1923 aIF-2BI family translation initiation factor; PFAM: initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; methylthioribose-1-phosphate isomerase complement(2006144..2007127) Calditerrivibrio nitroreducens DSM 19672 10009980 YP_004052000.1 CDS Calni_1935 NC_014758.1 2007136 2007684 R COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: ddf:DEFDS_0060 hypothetical protein; PFAM: NADPH-dependent FMN reductase; SPTR: uncharacterized protein; PFAM: NADPH-dependent FMN reductase; nadph-dependent fmn reductase complement(2007136..2007684) Calditerrivibrio nitroreducens DSM 19672 10009981 YP_004052001.1 CDS Calni_1936 NC_014758.1 2007685 2008227 R COGs: COG1514 2'-5' RNA ligase; InterPro IPR004175: IPR014051; KEGG: bpo:BP951000_1827 2-5 RNA ligase LigT; PFAM: Phosphoesterase HXTX; SPTR: 2-5 RNA ligase, LigT; TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase; 2'-5' RNA ligase complement(2007685..2008227) Calditerrivibrio nitroreducens DSM 19672 10009982 YP_004052002.1 CDS Calni_1937 NC_014758.1 2008224 2009444 R COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135: IPR008136: IPR001453; KEGG: ddf:DEFDS_0040 competence damage-inducible protein A; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: Competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; competence/damage-inducible protein cina complement(2008224..2009444) Calditerrivibrio nitroreducens DSM 19672 10009983 YP_004052003.1 CDS Calni_1938 NC_014758.1 2009446 2009907 R COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: ddf:DEFDS_0041 phosphatidylglycerophosphatase; PFAM: phosphatidylglycerophosphatase A; SPTR: Phosphatidylglycerophosphatase; PFAM: Phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase a complement(2009446..2009907) Calditerrivibrio nitroreducens DSM 19672 10009984 YP_004052004.1 CDS Calni_1939 NC_014758.1 2009918 2010628 R COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR006063: IPR006062; KEGG: dap:Dacet_2795 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(2009918..2010628) Calditerrivibrio nitroreducens DSM 19672 10009985 YP_004052005.1 CDS Calni_1940 NC_014758.1 2010619 2011227 R COGs: COG0118 Glutamine amidotransferase; InterPro IPR010139: IPR016226: IPR017926: IPR000991; KEGG: ddf:DEFDS_0043 amidotransferase HisH; PFAM: glutamine amidotransferase class-I; SPTR: Amidotransferase HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase subunit hish complement(2010619..2011227) Calditerrivibrio nitroreducens DSM 19672 10009986 YP_004052006.1 CDS Calni_1941 NC_014758.1 2011224 2011808 R COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807: IPR020565; KEGG: dap:Dacet_2797 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase complement(2011224..2011808) Calditerrivibrio nitroreducens DSM 19672 10009987 YP_004052007.1 CDS Calni_1942 NC_014758.1 2011905 2012810 D KEGG: ddf:DEFDS_0045 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2011905..2012810 Calditerrivibrio nitroreducens DSM 19672 10009988 YP_004052008.1 CDS Calni_1943 NC_014758.1 2012812 2015409 D COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterPro IPR000185: IPR014018: IPR011115: IPR011130: IPR 011116: IPR004027; KEGG: ddf:DEFDS_0046 preprotein translocase subunit A; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; SPTR: Protein translocase subunit secA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein translocase subunit seca 2012812..2015409 Calditerrivibrio nitroreducens DSM 19672 10009989 YP_004052009.1 CDS Calni_1944 NC_014758.1 2015538 2016041 D COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: ddf:DEFDS_0269 formylmethionine deformylase; PFAM: formylmethionine deformylase; SPTR: Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase 2015538..2016041 Calditerrivibrio nitroreducens DSM 19672 10009990 YP_004052010.1 CDS Calni_1945 NC_014758.1 2016104 2016493 D COGs: COG2033 Desulfoferrodoxin; InterPro IPR002742; KEGG: ddf:DEFDS_1019 superoxide reductase; PFAM: Desulfoferrodoxin ferrous iron-binding region; PRIAM: Superoxide reductase; SPTR: Superoxide reductase; PFAM: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin ferrous iron-binding domain; superoxide reductase 2016104..2016493 Calditerrivibrio nitroreducens DSM 19672 10009991 YP_004052011.1 CDS Calni_1947 NC_014758.1 2019193 2019387 R KEGG: mmx:MmarC6_1782 TPR repeat-containing protein; SPTR: uncharacterized protein; hypothetical protein complement(2019193..2019387) Calditerrivibrio nitroreducens DSM 19672 10009993 YP_004052012.1 CDS Calni_1949 NC_014758.1 2021023 2021802 R KEGG: cbt:CLH_2069 hypothetical ATP-dependent helicase; SPTR: Hypothetical ATP-dependent helicase; hypothetical protein complement(2021023..2021802) Calditerrivibrio nitroreducens DSM 19672 10009995 YP_004052013.1 CDS Calni_1951 NC_014758.1 2022826 2023233 R KEGG: tye:THEYE_A1805 ChrB domain protein; SPTR: ChrB domain protein; chrb domain-containing protein complement(2022826..2023233) Calditerrivibrio nitroreducens DSM 19672 10009997 YP_004052014.1 CDS Calni_1952 NC_014758.1 2023240 2024388 R InterPro IPR011701; KEGG: tye:THEYE_A1806 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Conserved protein; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(2023240..2024388) Calditerrivibrio nitroreducens DSM 19672 10009998 YP_004052015.1 CDS Calni_1953 NC_014758.1 2024895 2025773 D KEGG: cbt:CLH_2069 hypothetical ATP-dependent helicase; SPTR: Hypothetical ATP-dependent helicase; hypothetical protein 2024895..2025773 Calditerrivibrio nitroreducens DSM 19672 10009999 YP_004052016.1 CDS Calni_1955 NC_014758.1 2026816 2027043 R hypothetical protein complement(2026816..2027043) Calditerrivibrio nitroreducens DSM 19672 10010001 YP_004052017.1 CDS Calni_1957 NC_014758.1 2028253 2028888 D KEGG: tme:Tmel_0405 type I restriction-modification system, M subunit; SPTR: Type I restriction-modification system, M subunit; hypothetical protein 2028253..2028888 Calditerrivibrio nitroreducens DSM 19672 10010003 YP_004052018.1 CDS Calni_1959 NC_014758.1 2030461 2030874 D KEGG: bdu:BDU_2025 bdr protein; SPTR: Bdr protein; hypothetical protein 2030461..2030874 Calditerrivibrio nitroreducens DSM 19672 10010005 YP_004052019.1 CDS Calni_1960 NC_014758.1 2032121 2033653 D InterPro IPR018631: IPR012547; KEGG: hya:HY04AAS1_0957 protein of unknown function DUF1703; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: ATPase AAA-like protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 2032121..2033653 Calditerrivibrio nitroreducens DSM 19672 10010006 YP_004052020.1 CDS Calni_1961 NC_014758.1 2033744 2034895 D COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368: IPR020904: IPR001509; KEGG: saf:SULAZ_1202 GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 2033744..2034895 Calditerrivibrio nitroreducens DSM 19672 10010007 YP_004052021.1 CDS Calni_1962 NC_014758.1 2034901 2036025 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: saf:SULAZ_1203 GDP-L-fucose synthetase (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase); PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-L-fucose synthetase (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase); PFAM: NAD dependent epimerase/dehydratase family; nad-dependent epimerase/dehydratase 2034901..2036025 Calditerrivibrio nitroreducens DSM 19672 10010008 YP_004052022.1 CDS Calni_1963 NC_014758.1 2036003 2037040 D COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR002376; KEGG: aar:Acear_0675 formyl transferase domain protein; PFAM: formyl transferase domain protein; SPTR: Formyl transferase domain protein; PFAM: Formyl transferase; formyl transferase domain-containing protein 2036003..2037040 Calditerrivibrio nitroreducens DSM 19672 10010009 YP_004052023.1 CDS Calni_1964 NC_014758.1 2037033 2038142 D COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: mth:MTH334 perosamine synthetase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Perosamine synthetase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; degt/dnrj/eryc1/strs aminotransferase 2037033..2038142 Calditerrivibrio nitroreducens DSM 19672 10010010 YP_004052024.1 CDS Calni_1965 NC_014758.1 2038100 2038876 D InterPro IPR013216; KEGG: gur:Gura_3810 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase 2038100..2038876 Calditerrivibrio nitroreducens DSM 19672 10010011 YP_004052025.1 CDS Calni_1966 NC_014758.1 2038873 2040357 D COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: cha:CHAB381_0962 virulence factor MviN family protein; PFAM: polysaccharide biosynthesis protein; SPTR: Virulence factor mvin superfamily; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2038873..2040357 Calditerrivibrio nitroreducens DSM 19672 10010012 YP_004052026.1 CDS Calni_1967 NC_014758.1 2040354 2041505 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: glo:Glov_1956 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: uncharacterized protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 2040354..2041505 Calditerrivibrio nitroreducens DSM 19672 10010013 YP_004052027.1 CDS Calni_1968 NC_014758.1 2041498 2042436 D COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR005479: IPR001173; KEGG: tye:THEYE_A0487 cell wall biogenesis glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase involved in cell wall biogenesis; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 2041498..2042436 Calditerrivibrio nitroreducens DSM 19672 10010014 YP_004052028.1 CDS Calni_1969 NC_014758.1 2042440 2043540 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: syn:slr1076 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: Slr1076 protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 2042440..2043540 Calditerrivibrio nitroreducens DSM 19672 10010015 YP_004052029.1 CDS Calni_1970 NC_014758.1 2043537 2044886 D KEGG: zin:ZICARI_096 NADH:ubiquinone oxidoreductase I, membrane subunit N; SPTR: Secreted polysaccharide polymerase; hypothetical protein 2043537..2044886 Calditerrivibrio nitroreducens DSM 19672 10010016 YP_004052030.1 CDS Calni_1971 NC_014758.1 2044972 2046078 D COGs: COG3328 Transposase and inactivated derivatives; InterPro IPR001207; KEGG: ddf:DEFDS_P121 transposase; PFAM: transposase mutator type; SPTR: Transposase; PFAM: Transposase, Mutator family; transposase mutator type 2044972..2046078 Calditerrivibrio nitroreducens DSM 19672 10010017 YP_004052031.1 CDS Calni_1972 NC_014758.1 2046071 2046190 D hypothetical protein 2046071..2046190 Calditerrivibrio nitroreducens DSM 19672 10010018 YP_004052032.1 CDS Calni_1973 NC_014758.1 2046312 2046515 D KEGG: cyc:PCC7424_4811 phycobilisome protein; SPTR: Phycobilisome protein; phycobilisome protein 2046312..2046515 Calditerrivibrio nitroreducens DSM 19672 10010019 YP_004052033.1 CDS Calni_1974 NC_014758.1 2046505 2047746 D KEGG: ddi:DDB_G0290323 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2046505..2047746 Calditerrivibrio nitroreducens DSM 19672 10010020 YP_004052034.1 CDS Calni_1975 NC_014758.1 2047743 2048909 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sli:Slin_2586 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 2047743..2048909 Calditerrivibrio nitroreducens DSM 19672 10010021 YP_004052035.1 CDS Calni_1976 NC_014758.1 2049028 2049579 D COGs: COG0110 acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: dfe:Dfer_0251 colanic acid biosynthesis acetyltransferase WcaF; SPTR: acetyltransferase-like protein; colanic acid biosynthesis acetyltransferase wcaf 2049028..2049579 Calditerrivibrio nitroreducens DSM 19672 10010022 YP_004052036.1 CDS Calni_1977 NC_014758.1 2049604 2050362 D COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dba:Dbac_2545 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 2049604..2050362 Calditerrivibrio nitroreducens DSM 19672 10010023 YP_004052037.1 CDS Calni_1978 NC_014758.1 2050404 2051351 D COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: ddf:DEFDS_0384 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase family 4; glycosyltransferase 2050404..2051351 Calditerrivibrio nitroreducens DSM 19672 10010024 YP_004052038.1 CDS Calni_1980 NC_014758.1 2053046 2053762 R COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: ddf:DEFDS_0811 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen iii synthase hem4 complement(2053046..2053762) Calditerrivibrio nitroreducens DSM 19672 10010026 YP_004052039.1 CDS Calni_1981 NC_014758.1 2053749 2054675 R COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: ddf:DEFDS_0810 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; hydroxymethylbilane synthase complement(2053749..2054675) Calditerrivibrio nitroreducens DSM 19672 10010027 YP_004052040.1 CDS Calni_1982 NC_014758.1 2054690 2055955 R COGs: COG0373 Glutamyl-tRNA reductase; InterPro IPR000343: IPR015895: IPR006151: IPR015896; KEGG: ddf:DEFDS_0809 glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; SPTR: Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(2054690..2055955) Calditerrivibrio nitroreducens DSM 19672 10010028 YP_004052041.1 CDS Calni_1983 NC_014758.1 2055957 2056742 R InterPro IPR002541; KEGG: ddf:DEFDS_0808 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein; cytochrome c assembly protein complement(2055957..2056742) Calditerrivibrio nitroreducens DSM 19672 10010029 YP_004052042.1 CDS Calni_1984 NC_014758.1 2056828 2058144 D COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: ddf:DEFDS_0807 multidrug resistance protein, MATE family; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Multidrug resistance protein, MATE family; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family; mate efflux family protein 2056828..2058144 Calditerrivibrio nitroreducens DSM 19672 10010030 YP_004052043.1 CDS Calni_1985 NC_014758.1 2058134 2059000 D COGs: COG4866 conserved hypothetical protein; KEGG: ddf:DEFDS_0806 hypothetical protein; SPTR: uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2156); hypothetical protein 2058134..2059000 Calditerrivibrio nitroreducens DSM 19672 10010031 YP_004052044.1 CDS Calni_1986 NC_014758.1 2058994 2060673 D COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752: IPR002880; KEGG: ddf:DEFDS_0805 2-oxoacid oxidoreductase gamma-subunit alpha; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; SPTR: 2-oxoacid oxidoreductase, gamma-alpha subunit; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2058994..2060673 Calditerrivibrio nitroreducens DSM 19672 10010032 YP_004052045.1 CDS Calni_1987 NC_014758.1 2060670 2061518 D COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011896: IPR011766; KEGG: ddf:DEFDS_0804 2-oxoacid oxidoreductase subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoacid oxidoreductase, beta subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family; pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta 2060670..2061518 Calditerrivibrio nitroreducens DSM 19672 10010033 YP_004052046.1 CDS Calni_1988 NC_014758.1 2061532 2064123 D COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR000276: IPR002192; KEGG: dap:Dacet_2177 pyruvate phosphate dikinase PEP/pyruvate-binding protein; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; SPTR: Pyruvate phosphate dikinase PEP/pyruvate-binding protein; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; pyruvate phosphate dikinase pep/pyruvate-binding protein 2061532..2064123 Calditerrivibrio nitroreducens DSM 19672 10010034 YP_004052047.1 CDS Calni_1989 NC_014758.1 2064136 2065767 D COGs: COG0033 Phosphoglucomutase; InterPro IPR005852: IPR016066: IPR005844: IPR005845: IPR 005846: IPR005843; KEGG: tra:Trad_0749 phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Phosphoglucomutase, alpha-D-glucose phosphate-specific; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; phosphoglucomutase 2064136..2065767 Calditerrivibrio nitroreducens DSM 19672 10010035 YP_004052048.1 CDS Calni_1990 NC_014758.1 2065780 2066466 D InterPro IPR013216; KEGG: ddf:DEFDS_0144 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase 2065780..2066466 Calditerrivibrio nitroreducens DSM 19672 10010036 YP_004052049.1 CDS Calni_1992 NC_014758.1 2068397 2070313 R COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR013027: IPR000103: IPR001155; KEGG: ddf:DEFDS_1694 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: NADH:flavin oxidoreductase/NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase complement(2068397..2070313) Calditerrivibrio nitroreducens DSM 19672 10010038 YP_004052050.1 CDS Calni_1993 NC_014758.1 2070688 2071803 R COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: ddf:DEFDS_1153 hypothetical protein; PFAM: Fmu (Sun) domain protein; SPTR: uncharacterized protein; PFAM: NOL1/NOP2/sun family; fmu (sun) domain-containing protein complement(2070688..2071803) Calditerrivibrio nitroreducens DSM 19672 10010039 YP_004052051.1 CDS Calni_1994 NC_014758.1 2071796 2072137 R COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509; KEGG: ddf:DEFDS_0180 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein DEFDS_0180; PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252; hypothetical protein complement(2071796..2072137) Calditerrivibrio nitroreducens DSM 19672 10010040 YP_004052052.1 CDS Calni_1995 NC_014758.1 2072134 2072670 R COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: ddf:DEFDS_0181 ribonuclease HII; PFAM: ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease; PFAM: Ribonuclease HII; ribonuclease h complement(2072134..2072670) Calditerrivibrio nitroreducens DSM 19672 10010041 YP_004052053.1 CDS Calni_1996 NC_014758.1 2072687 2073352 R COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR004392: IPR012202: IPR003495; KEGG: ddf:DEFDS_0182 hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; SPTR: Hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; hydrogenase accessory protein hypb complement(2072687..2073352) Calditerrivibrio nitroreducens DSM 19672 10010042 YP_004052054.1 CDS Calni_1997 NC_014758.1 2073352 2073693 R COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); InterPro IPR000688; KEGG: ddf:DEFDS_0183 hydrogenase expression/synthesis protein HypA; PFAM: hydrogenase expression/synthesis HypA; SPTR: Probable hydrogenase nickel incorporation protein hypA; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA; hydrogenase nickel insertion protein hypa complement(2073352..2073693) Calditerrivibrio nitroreducens DSM 19672 10010043 YP_004052055.1 CDS Calni_1998 NC_014758.1 2073695 2074753 R COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387: IPR001478: IPR008915; KEGG: ddf:DEFDS_0124 membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; site-2 protease complement(2073695..2074753) Calditerrivibrio nitroreducens DSM 19672 10010044 YP_004052056.1 CDS Calni_1999 NC_014758.1 2074771 2075916 R COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821: IPR013512: IPR013644; KEGG: ddf:DEFDS_0123 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2074771..2075916) Calditerrivibrio nitroreducens DSM 19672 10010045 YP_004052057.1 CDS Calni_2000 NC_014758.1 2075913 2076725 R COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: ddf:DEFDS_0122 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family; phosphatidate cytidylyltransferase complement(2075913..2076725) Calditerrivibrio nitroreducens DSM 19672 10010046 YP_004052058.1 CDS Calni_2001 NC_014758.1 2076703 2077434 R COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR001441: IPR018520; KEGG: ddf:DEFDS_0121 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl pyrophosphate synthetase complement(2076703..2077434) Calditerrivibrio nitroreducens DSM 19672 10010047 YP_004052059.1 CDS Calni_2002 NC_014758.1 2077434 2077988 R COGs: COG0233 Ribosome recycling factor; InterPro IPR002661: IPR015998; KEGG: ddf:DEFDS_0120 ribosome recycling factor Frr; PFAM: ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor complement(2077434..2077988) Calditerrivibrio nitroreducens DSM 19672 10010048 YP_004052060.1 CDS Calni_2003 NC_014758.1 2077993 2078706 R COGs: COG0528 Uridylate kinase; InterPro IPR015963: IPR011817: IPR001048; KEGG: ddf:DEFDS_0119 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Uridylate kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase complement(2077993..2078706) Calditerrivibrio nitroreducens DSM 19672 10010049 YP_004052061.1 CDS Calni_2004 NC_014758.1 2078703 2079053 R KEGG: ddf:DEFDS_0118 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2078703..2079053) Calditerrivibrio nitroreducens DSM 19672 10010050 YP_004052062.1 CDS Calni_2005 NC_014758.1 2079071 2079664 R COGs: COG0681 Signal peptidase I; InterPro IPR000223: IPR019757: IPR019758: IPR019759; KEGG: ddf:DEFDS_0117 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase i complement(2079071..2079664) Calditerrivibrio nitroreducens DSM 19672 10010051 YP_004052063.1 CDS Calni_2006 NC_014758.1 2079683 2081485 R COGs: COG0481 Membrane GTPase LepA; InterPro IPR005225: IPR006297: IPR000795: IPR004161: IPR 000640: IPR013842; KEGG: ddf:DEFDS_0116 GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein lepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein lepa complement(2079683..2081485) Calditerrivibrio nitroreducens DSM 19672 10010052 YP_004052064.1 CDS Calni_2007 NC_014758.1 2081489 2082811 R COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: ddf:DEFDS_0115 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(2081489..2082811) Calditerrivibrio nitroreducens DSM 19672 10010053 YP_004052065.1 CDS Calni_2008 NC_014758.1 2082976 2084322 D COGs: COG0541 Signal recognition particle GTPase; InterPro IPR004780: IPR003593: IPR000897: IPR013822: IPR 004125; KEGG: ddf:DEFDS_0255 signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: Signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; signal recognition particle subunit ffh/srp54 (srp54) 2082976..2084322 Calditerrivibrio nitroreducens DSM 19672 10010054 YP_004052066.1 CDS Calni_2009 NC_014758.1 2084337 2084597 D COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: ddf:DEFDS_0254 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 2084337..2084597 Calditerrivibrio nitroreducens DSM 19672 10010055 YP_004052067.1 CDS Calni_2010 NC_014758.1 2084616 2084846 D COGs: COG1837 RNA-binding protein (contains KH domain); InterPro IPR004088: IPR020627; KEGG: ddf:DEFDS_0253 hypothetical protein; SPTR: uncharacterized protein; PFAM: KH domain; RNA-binding protein (kh domain) 2084616..2084846 Calditerrivibrio nitroreducens DSM 19672 10010056 YP_004052068.1 CDS Calni_2011 NC_014758.1 2084881 2085396 D COGs: COG0806 RimM protein required for 16S rRNA processing; InterPro IPR011961: IPR002676: IPR007903; KEGG: dap:Dacet_2279 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; SPTR: 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein rimm 2084881..2085396 Calditerrivibrio nitroreducens DSM 19672 10010057 YP_004052069.1 CDS Calni_2012 NC_014758.1 2085383 2086684 D COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649: IPR016009: IPR019230; KEGG: ddf:DEFDS_0251 tRNA (guanine-N(1)-)-methyltransferase; PFAM: Protein of unknown function DUF2168; tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (Guanine-1)-methyltransferase; Uncharacterized protein conserved in bacteria (DUF2168); TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (guanine37-n(1)-) methyltransferase 2085383..2086684 Calditerrivibrio nitroreducens DSM 19672 10010058 YP_004052070.1 CDS Calni_2013 NC_014758.1 2086681 2087037 D COGs: COG0335 Ribosomal protein L19; InterPro IPR001857: IPR018257; KEGG: dap:Dacet_2277 50S ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 2086681..2087037 Calditerrivibrio nitroreducens DSM 19672 10010059 YP_004052071.1 CDS Calni_2014 NC_014758.1 2087096 2087521 D COGs: COG0102 Ribosomal protein L13; InterPro IPR005823: IPR005822; KEGG: ddf:DEFDS_0249 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 2087096..2087521 Calditerrivibrio nitroreducens DSM 19672 10010060 YP_004052072.1 CDS Calni_2015 NC_014758.1 2087532 2087921 D COGs: COG0103 Ribosomal protein S9; InterPro IPR020574: IPR000754; KEGG: ddf:DEFDS_0248 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 2087532..2087921 Calditerrivibrio nitroreducens DSM 19672 10010061 YP_004052073.1 CDS Calni_2016 NC_014758.1 2088000 2090132 D COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641: IPR003029: IPR018974; KEGG: ddf:DEFDS_0638 transcription accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: Transcription accessory protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; tex-like protein 2088000..2090132 Calditerrivibrio nitroreducens DSM 19672 10010062 YP_004052074.1 CDS Calni_2017 NC_014758.1 2090232 2091590 D COGs: COG1350 alternative tryptophan synthase beta-subunit (paralog of TrpB); InterPro IPR006316: IPR006653: IPR001926; KEGG: ddf:DEFDS_1396 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Tryptophan synthase, beta subunit; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; tryptophan synthase subunit beta 2090232..2091590 Calditerrivibrio nitroreducens DSM 19672 10010063 YP_004052075.1 CDS Calni_2018 NC_014758.1 2091640 2092206 D COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: ddf:DEFDS_1431 hypothetical protein; PFAM: protein of unknown function DUF208; SPTR: uncharacterized protein; PFAM: Uncharacterized BCR, COG1636; hypothetical protein 2091640..2092206 Calditerrivibrio nitroreducens DSM 19672 10010064 YP_004052076.1 CDS Calni_2019 NC_014758.1 2092269 2093468 R COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: afu:AF0907 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: uncharacterized protein; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(2092269..2093468) Calditerrivibrio nitroreducens DSM 19672 10010065 YP_004052077.1 CDS Calni_2020 NC_014758.1 2093728 2095275 D InterPro IPR018631: IPR012547; KEGG: saf:SULAZ_0529 conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: Conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 2093728..2095275 Calditerrivibrio nitroreducens DSM 19672 10010066 YP_004052078.1 CDS Calni_2021 NC_014758.1 2095519 2095998 R KEGG: pfh:PFHG_02955 hypothetical protein; SPTR: tRNA dimethylallyltransferase; hypothetical protein complement(2095519..2095998) Calditerrivibrio nitroreducens DSM 19672 10010067 YP_004052079.1 CDS Calni_2022 NC_014758.1 2095967 2097574 R COGs: COG4930 ATP-dependent Lon-type protease; InterPro IPR014061; KEGG: dma:DMR_36110 peptidase S16 family protein; SPTR: Peptidase S16 family protein; TIGRFAM: conserved hypothetical protein; conserved hypothetical protein TIGR02688; peptidase s16 family protein complement(2095967..2097574) Calditerrivibrio nitroreducens DSM 19672 10010068 YP_004052080.1 CDS Calni_2023 NC_014758.1 2097586 2100090 R InterPro IPR014060: IPR013973; KEGG: esi:Exig_0316 alkaline phosphatase domain-containing protein; PFAM: PglZ domain protein; SPTR: PglZ domain protein; PFAM: PglZ domain; TIGRFAM: conserved hypothetical protein TIGR02687; pglz domain-containing protein complement(2097586..2100090) Calditerrivibrio nitroreducens DSM 19672 10010069 YP_004052081.1 CDS Calni_2024 NC_014758.1 2100095 2101972 R KEGG: clj:CLJU_c32690 hypothetical protein; SPTR: Probable restriction enzyme; hypothetical protein complement(2100095..2101972) Calditerrivibrio nitroreducens DSM 19672 10010070 YP_004052082.1 CDS Calni_2025 NC_014758.1 2101982 2102482 R KEGG: tva:TVAG_060420 hypothetical protein; SPTR: Ribosomal protein S5; hypothetical protein complement(2101982..2102482) Calditerrivibrio nitroreducens DSM 19672 10010071 YP_004052083.1 CDS Calni_2026 NC_014758.1 2102475 2104214 R InterPro IPR002296: IPR002052; KEGG: gca:Galf_0887 restriction enzyme; SPTR: uncharacterized protein; PFAM: Eco57I restriction endonuclease; restriction enzyme complement(2102475..2104214) Calditerrivibrio nitroreducens DSM 19672 10010072 YP_004052084.1 CDS Calni_2027 NC_014758.1 2104217 2107702 R KEGG: ttm:Tthe_0499 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2104217..2107702) Calditerrivibrio nitroreducens DSM 19672 10010073 YP_004052085.1 CDS Calni_2028 NC_014758.1 2107699 2108289 R InterPro IPR014858; KEGG: msi:Msm_1750 hypothetical protein; PFAM: Domain of unknown function DUF1788; SPTR: uncharacterized protein; PFAM: Domain of unknown function (DUF1788); hypothetical protein complement(2107699..2108289) Calditerrivibrio nitroreducens DSM 19672 10010074 YP_004052086.1 CDS Calni_2029 NC_014758.1 2108294 2108863 R InterPro IPR014948; KEGG: chy:CHY_2656 hypothetical protein; PFAM: Protein of unkown function DUF1819 inner membrane; SPTR: uncharacterized protein; PFAM: inner membrane protein (DUF1819); hypothetical protein complement(2108294..2108863) Calditerrivibrio nitroreducens DSM 19672 10010075 YP_004052087.1 CDS Calni_2030 NC_014758.1 2111582 2113120 D InterPro IPR018631: IPR012547; KEGG: ddf:DEFDS_0353 hypothetical protein; PFAM: ATPase AAA-like; protein of unknown function DUF1703; SPTR: uncharacterized protein; PFAM: Protein of unknown function (DUF1703); Predicted ATPase AAA; ATPase AAA 2111582..2113120 Calditerrivibrio nitroreducens DSM 19672 10010076 YP_004052088.1 CDS Calni_2031 NC_014758.1 2113861 2114478 D KEGG: bpo:BP951000_0231 curli production assembly transport component CsgG; SPTR: uncharacterized protein; PFAM: Curli production assembly/transport component CsgG; hypothetical protein 2113861..2114478 Calditerrivibrio nitroreducens DSM 19672 10010077 YP_004052089.1 CDS Calni_2032 NC_014758.1 2114509 2116134 R COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844: IPR018370: IPR002423; KEGG: ddf:DEFDS_0240 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin groel complement(2114509..2116134) Calditerrivibrio nitroreducens DSM 19672 10010078 YP_004052090.1 CDS Calni_2033 NC_014758.1 2116150 2116443 R COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR001476: IPR018369: IPR020818; KEGG: ddf:DEFDS_0239 chaperonin GroES; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit; chaperonin cpn10 complement(2116150..2116443) Calditerrivibrio nitroreducens DSM 19672 10010079 YP_004052091.1 CDS Calni_2034 NC_014758.1 2116666 2118057 D COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterPro IPR004430: IPR001030: IPR018136; KEGG: ddf:DEFDS_0238 3-isopropylmalate dehydratase large subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit 2116666..2118057 Calditerrivibrio nitroreducens DSM 19672 10010080 YP_004052092.1 CDS Calni_2035 NC_014758.1 2118071 2118673 D COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR004431: IPR000573; KEGG: ddf:DEFDS_0237 3-isopropylmalate dehydratase small subuni; PFAM: aconitate hydratase domain-containing protein; SPTR: 3-isopropylmalate dehydratase, small subuni; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 2118071..2118673 Calditerrivibrio nitroreducens DSM 19672 10010081 YP_004052093.1 CDS Calni_2036 NC_014758.1 2118689 2119222 D COGs: COG2862 membrane protein; InterPro IPR005134; KEGG: saf:SULAZ_1113 hypothetical protein; PFAM: Uncharacterised protein family UPF0114; SPTR: uncharacterized protein; PFAM: Uncharacterized protein family, UPF0114; hypothetical protein 2118689..2119222 Calditerrivibrio nitroreducens DSM 19672 10010082 YP_004052094.1 CDS Calni_2037 NC_014758.1 2119374 2120687 D InterPro IPR002559; KEGG: sso:SSO1775 transposase ISC1359; PFAM: transposase IS4 family protein; SPTR: Transposase, IS4 family protein; PFAM: Transposase DDE domain; transposase is4 family protein 2119374..2120687 Calditerrivibrio nitroreducens DSM 19672 10010083 YP_004052095.1 CDS Calni_2038 NC_014758.1 2120784 2121098 D COGs: COG0261 Ribosomal protein L21; InterPro IPR001787; KEGG: ddf:DEFDS_0265 50S ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 2120784..2121098 Calditerrivibrio nitroreducens DSM 19672 10010084 YP_004052096.1 CDS Calni_2039 NC_014758.1 2121109 2121372 D COGs: COG0211 Ribosomal protein L27; InterPro IPR001684: IPR018261; KEGG: ddf:DEFDS_0266 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L25 2121109..2121372 Calditerrivibrio nitroreducens DSM 19672 10010085 YP_004052097.1 CDS Calni_2040 NC_014758.1 2121441 2122508 D COGs: COG0536 GTPase; InterPro IPR014100: IPR005225: IPR006073: IPR006074: IPR 006169: IPR002917; KEGG: ddf:DEFDS_0267 GTP-binding protein Obg; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain; GTP-binding protein obg/cgta 2121441..2122508 Calditerrivibrio nitroreducens DSM 19672 10010086 YP_004052098.1 CDS Calni_2041 NC_014758.1 2122399 2123172 R COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275: IPR002731; KEGG: ddf:DEFDS_1233 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; CoA-substrate-specific enzyme activase complement(2122399..2123172) Calditerrivibrio nitroreducens DSM 19672 10010087 YP_004052099.1 CDS Calni_2042 NC_014758.1 2123157 2124155 R COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: ddf:DEFDS_1234 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; SPTR: 2-hydroxyglutaryl-CoA dehydratase, D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase d-component complement(2123157..2124155) Calditerrivibrio nitroreducens DSM 19672 10010088 YP_004052100.1 CDS Calni_2043 NC_014758.1 2124152 2124436 R KEGG: ddf:DEFDS_1235 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2124152..2124436) Calditerrivibrio nitroreducens DSM 19672 10010089 YP_004052101.1 CDS Calni_2044 NC_014758.1 2124537 2124701 R KEGG: mmh:Mmah_1106 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2124537..2124701) Calditerrivibrio nitroreducens DSM 19672 10010090 YP_004052102.1 CDS Calni_2045 NC_014758.1 2124735 2125268 R KEGG: tan:TA17710 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2124735..2125268) Calditerrivibrio nitroreducens DSM 19672 10010091 YP_004052103.1 CDS Calni_2046 NC_014758.1 2125553 2126860 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160: IPR001789; KEGG: ddf:DEFDS_1070 signal transduction response regulator; PFAM: GGDEF domain containing protein; response regulator receiver; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; response regulator receiver; SPTR: Signal transduction response regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; response regulator receiver modulated diguanylate cyclase complement(2125553..2126860) Calditerrivibrio nitroreducens DSM 19672 10010092 YP_004052104.1 CDS Calni_2047 NC_014758.1 2126902 2128362 D COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR004527: IPR020060: IPR001412: IPR020058; KEGG: ddf:DEFDS_1071 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 2126902..2128362 Calditerrivibrio nitroreducens DSM 19672 10010093 YP_004052105.1 CDS Calni_2048 NC_014758.1 2128356 2129678 D COGs: COG1160 GTPase; InterPro IPR005225: IPR016484: IPR006073: IPR002917; KEGG: ddf:DEFDS_1072 small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; GTP-binding protein Era; small GTP-binding protein domain; ribosome-associated GTPase enga 2128356..2129678 Calditerrivibrio nitroreducens DSM 19672 10010094 YP_004052106.1 CDS Calni_2049 NC_014758.1 2129697 2130998 D COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176: IPR004839; KEGG: ddf:DEFDS_0619 aspartate transaminase; PFAM: aminotransferase class I and II; SPTR: Aspartate transaminase; PFAM: Aminotransferase class I and II; aminotransferase class i and ii 2129697..2130998 Calditerrivibrio nitroreducens DSM 19672 10010095 YP_004052107.1 CDS Calni_2050 NC_014758.1 2131272 2132960 D COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR001902: IPR002645: IPR011547; KEGG: wsu:WS0651 sulfate transporter sulfate transporter family protein; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; SPTR: SULFATE TRANSPORTER SULFATE TRANSPORTER FAMILY PROTEIN; TIGRFAM: sulfate transporter; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: anti-anti-sigma factor; high affinity sulphate transporter 1; sulfate transporter 2131272..2132960 Calditerrivibrio nitroreducens DSM 19672 10010096 YP_004052108.1 CDS Calni_2051 NC_014758.1 2133040 2133555 D COGs: COG1576 conserved hypothetical protein; InterPro IPR003742; KEGG: apr:Apre_0291 protein of unknown function DUF163; PFAM: protein of unknown function DUF163; SPTR: Ribosomal RNA large subunit methyltransferase H; PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; hypothetical protein 2133040..2133555 Calditerrivibrio nitroreducens DSM 19672 10010097 YP_004052109.1 CDS Calni_2052 NC_014758.1 2133589 2133951 D COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: ddf:DEFDS_1897 DnaK suppressor protein DksA; SPTR: DnaK suppressor protein DksA; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator 2133589..2133951 Calditerrivibrio nitroreducens DSM 19672 10010098 YP_004052110.1 CDS Calni_2053 NC_014758.1 2133955 2135478 D COGs: COG0696 Phosphoglyceromutase; InterPro IPR005995: IPR018089: IPR011258: IPR006124; KEGG: ddf:DEFDS_1896 phosphoglycerate mutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; phosphoglycerate mutase 2133955..2135478 Calditerrivibrio nitroreducens DSM 19672 10010099 YP_004052111.1 CDS Calni_2054 NC_014758.1 2135519 2135875 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_0085 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: uncharacterized protein; PFAM: Response regulator receiver domain; response regulator receiver protein complement(2135519..2135875) Calditerrivibrio nitroreducens DSM 19672 10010100 YP_004052112.1 CDS Calni_2055 NC_014758.1 2135872 2137302 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR005467: IPR004358; KEGG: dap:Dacet_2810 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase complement(2135872..2137302) Calditerrivibrio nitroreducens DSM 19672 10010101 YP_004052113.1 CDS Calni_2056 NC_014758.1 2137352 2137846 R KEGG: ddf:DEFDS_0087 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2137352..2137846) Calditerrivibrio nitroreducens DSM 19672 10010102 YP_004052114.1 CDS Calni_2057 NC_014758.1 2137859 2138464 R KEGG: ddf:DEFDS_0088 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2137859..2138464) Calditerrivibrio nitroreducens DSM 19672 10010103 YP_004052115.1 CDS Calni_2058 NC_014758.1 2138496 2141117 R COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR010121: IPR018274: IPR000121: IPR018040: IPR 002192: IPR008279; KEGG: ddf:DEFDS_0235 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; pyruvate phosphate dikinase complement(2138496..2141117) Calditerrivibrio nitroreducens DSM 19672 10010104 YP_004052116.1 CDS Calni_2059 NC_014758.1 2141127 2143196 R COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR015944: IPR006194: IPR002311: IPR008909; KEGG: ddf:DEFDS_0236 glycyl-tRNA synthetase subunit beta; PFAM: glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain protein; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; glycyl-tRNA synthetase subunit beta complement(2141127..2143196) Calditerrivibrio nitroreducens DSM 19672 10010105 YP_004052117.1 CDS Calni_2060 NC_014758.1 2143323 2143676 R KEGG: tva:TVAG_465640 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(2143323..2143676) Calditerrivibrio nitroreducens DSM 19672 10010106 YP_004052118.1 CDS Calni_2061 NC_014758.1 2143884 2144906 D COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050: IPR005244: IPR007197; KEGG: ddf:DEFDS_0011 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: uncharacterized protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; menaquinone biosynthesis protein, SCO4550 family; radical SAM domain-containing protein 2143884..2144906 Calditerrivibrio nitroreducens DSM 19672 10010108 YP_004052119.1 CDS Calni_2062 NC_014758.1 2144903 2146048 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003018: IPR003661: IPR003594: IPR005467: IPR 004358; KEGG: ddf:DEFDS_0012 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SPTR: uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; gaf sensor signal transduction histidine kinase 2144903..2146048 Calditerrivibrio nitroreducens DSM 19672 10010109 YP_004052120.1 CDS Calni_2063 NC_014758.1 2146059 2148866 D COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR004602: IPR003593: IPR003439: IPR017871; KEGG: ddf:DEFDS_0014 excinuclease ABC subunit A; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit a 2146059..2148866 Calditerrivibrio nitroreducens DSM 19672 10010110 YP_004052121.1 CDS Calni_2064 NC_014758.1 2148859 2150607 D COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ddf:DEFDS_0015 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; cell wall hydrolase/autolysin 2148859..2150607 Calditerrivibrio nitroreducens DSM 19672 10010111 YP_004052122.1 CDS Calni_2065 NC_014758.1 2150597 2153980 D InterPro IPR002363: IPR007452; KEGG: ddf:DEFDS_0016 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: uncharacterized protein; PFAM: Family of unknown function (DUF490); hypothetical protein 2150597..2153980 Calditerrivibrio nitroreducens DSM 19672 10010112 YP_004052123.1 CDS Calni_2066 NC_014758.1 2153949 2156468 D COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: ddf:DEFDS_0017 hypothetical protein; PFAM: surface antigen variable number repeat-containing protein; surface antigen (D15); SPTR: uncharacterized protein; PFAM: Surface antigen variable number repeat; Surface antigen; surface antigen variable number repeat-containing protein 2153949..2156468 Calditerrivibrio nitroreducens DSM 19672 10010113 YP_004052124.1 CDS Calni_2067 NC_014758.1 2156469 2157257 R COGs: COG1723 conserved hypothetical protein; InterPro IPR003734; KEGG: wsu:WS1725 hypothetical protein; PFAM: protein of unknown function DUF155; SPTR: uncharacterized protein; PFAM: Uncharacterised ACR, YagE family COG1723; hypothetical protein complement(2156469..2157257) Calditerrivibrio nitroreducens DSM 19672 10010114 YP_004052125.1 CDS Calni_2068 NC_014758.1 2157289 2157795 R COGs: COG2193 Bacterioferritin (cytochrome b1); InterPro IPR002024: IPR009040: IPR008331; KEGG: sdl:Sdel_1229 ferritin Dps family protein; PFAM: Ferritin Dps family protein; SPTR: Ferritin Dps family protein; PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; ferritin dps family protein complement(2157289..2157795) Calditerrivibrio nitroreducens DSM 19672 10010115 Calni_R0001 tRNA Calni_R0001 NC_014758.1 143490 143573 R tRNA-Leu complement(143490..143573) Calditerrivibrio nitroreducens DSM 19672 10008146 Calni_R0002 tRNA Calni_R0002 NC_014758.1 190946 191035 D tRNA-Ser 190946..191035 Calditerrivibrio nitroreducens DSM 19672 10008190 Calni_R0005 tRNA Calni_R0005 NC_014758.1 294330 294403 D tRNA-Pro 294330..294403 Calditerrivibrio nitroreducens DSM 19672 10008289 Calni_R0007 tRNA Calni_R0007 NC_014758.1 384363 384435 D tRNA-Lys 384363..384435 Calditerrivibrio nitroreducens DSM 19672 10008379 Calni_R0008 tRNA Calni_R0008 NC_014758.1 384439 384516 D tRNA-Glu 384439..384516 Calditerrivibrio nitroreducens DSM 19672 10008380 Calni_R0009 tRNA Calni_R0009 NC_014758.1 384523 384595 D tRNA-Val 384523..384595 Calditerrivibrio nitroreducens DSM 19672 10008381 Calni_R0010 tRNA Calni_R0010 NC_014758.1 384602 384675 D tRNA-Asp 384602..384675 Calditerrivibrio nitroreducens DSM 19672 10008382 Calni_R0011 tRNA Calni_R0011 NC_014758.1 503097 503181 D tRNA-Leu 503097..503181 Calditerrivibrio nitroreducens DSM 19672 10008494 Calni_R0012 tRNA Calni_R0012 NC_014758.1 626486 626566 R tRNA-Leu complement(626486..626566) Calditerrivibrio nitroreducens DSM 19672 10008609 Calni_R0013 tRNA Calni_R0013 NC_014758.1 626579 626651 R tRNA-His complement(626579..626651) Calditerrivibrio nitroreducens DSM 19672 10008610 Calni_R0014 tRNA Calni_R0014 NC_014758.1 626662 626735 R tRNA-Arg complement(626662..626735) Calditerrivibrio nitroreducens DSM 19672 10008611 Calni_R0015 tRNA Calni_R0015 NC_014758.1 801970 802042 R tRNA-Gly complement(801970..802042) Calditerrivibrio nitroreducens DSM 19672 10008776 Calni_R0016 tRNA Calni_R0016 NC_014758.1 826679 826769 D tRNA-Ser 826679..826769 Calditerrivibrio nitroreducens DSM 19672 10008800 Calni_R0017 tRNA Calni_R0017 NC_014758.1 830243 830315 D tRNA-Gly 830243..830315 Calditerrivibrio nitroreducens DSM 19672 10008803 Calni_R0019 tRNA Calni_R0019 NC_014758.1 935715 935787 R tRNA-Asn complement(935715..935787) Calditerrivibrio nitroreducens DSM 19672 10008903 Calni_R0020 tRNA Calni_R0020 NC_014758.1 1062230 1062303 R tRNA-Pro complement(1062230..1062303) Calditerrivibrio nitroreducens DSM 19672 10009027 Calni_R0021 tRNA Calni_R0021 NC_014758.1 1088214 1088297 R tRNA-Leu complement(1088214..1088297) Calditerrivibrio nitroreducens DSM 19672 10009054 Calni_R0022 tRNA Calni_R0022 NC_014758.1 1119577 1119661 D tRNA-Leu 1119577..1119661 Calditerrivibrio nitroreducens DSM 19672 10009081 Calni_R0023 tRNA Calni_R0023 NC_014758.1 1188653 1188729 D tRNA-Pro 1188653..1188729 Calditerrivibrio nitroreducens DSM 19672 10009146 Calni_R0024 tRNA Calni_R0024 NC_014758.1 1246424 1246497 D tRNA-Arg 1246424..1246497 Calditerrivibrio nitroreducens DSM 19672 10009205 Calni_R0025 tRNA Calni_R0025 NC_014758.1 1270764 1270837 R tRNA-Arg complement(1270764..1270837) Calditerrivibrio nitroreducens DSM 19672 10009233 Calni_R0026 tRNA Calni_R0026 NC_014758.1 1396715 1396791 R tRNA-Met complement(1396715..1396791) Calditerrivibrio nitroreducens DSM 19672 10009364 Calni_R0027 tRNA Calni_R0027 NC_014758.1 1397036 1397106 D tRNA-Cys 1397036..1397106 Calditerrivibrio nitroreducens DSM 19672 10009365 Calni_R0028 tRNA Calni_R0028 NC_014758.1 1397322 1397397 D tRNA-Phe 1397322..1397397 Calditerrivibrio nitroreducens DSM 19672 10009366 Calni_R0029 tRNA Calni_R0029 NC_014758.1 1397405 1397480 D tRNA-Gln 1397405..1397480 Calditerrivibrio nitroreducens DSM 19672 10009367 Calni_R0032 tRNA Calni_R0032 NC_014758.1 1401354 1401426 R tRNA-Ala complement(1401354..1401426) Calditerrivibrio nitroreducens DSM 19672 10009371 Calni_R0033 tRNA Calni_R0033 NC_014758.1 1401518 1401594 R tRNA-Ile complement(1401518..1401594) Calditerrivibrio nitroreducens DSM 19672 10009372 Calni_R0051 tRNA Calni_R0051 NC_014758.1 1452183 1452278 D tRNA-Sec 1452183..1452278 Calditerrivibrio nitroreducens DSM 19672 10009425 Calni_R0035 tRNA Calni_R0035 NC_014758.1 1566623 1566696 R tRNA-Met complement(1566623..1566696) Calditerrivibrio nitroreducens DSM 19672 10009551 Calni_R0036 tRNA Calni_R0036 NC_014758.1 1566731 1566807 R tRNA-Met complement(1566731..1566807) Calditerrivibrio nitroreducens DSM 19672 10009552 Calni_R0037 tRNA Calni_R0037 NC_014758.1 1584894 1584969 R tRNA-Trp complement(1584894..1584969) Calditerrivibrio nitroreducens DSM 19672 10009569 Calni_R0038 tRNA Calni_R0038 NC_014758.1 1586358 1586431 R tRNA-Thr complement(1586358..1586431) Calditerrivibrio nitroreducens DSM 19672 10009572 Calni_R0039 tRNA Calni_R0039 NC_014758.1 1646229 1646301 D tRNA-Ala 1646229..1646301 Calditerrivibrio nitroreducens DSM 19672 10009633 Calni_R0040 tRNA Calni_R0040 NC_014758.1 1825783 1825855 D tRNA-Thr 1825783..1825855 Calditerrivibrio nitroreducens DSM 19672 10009802 Calni_R0041 tRNA Calni_R0041 NC_014758.1 1825865 1825947 D tRNA-Tyr 1825865..1825947 Calditerrivibrio nitroreducens DSM 19672 10009803 Calni_R0042 tRNA Calni_R0042 NC_014758.1 1825958 1826034 D tRNA-Gly 1825958..1826034 Calditerrivibrio nitroreducens DSM 19672 10009804 Calni_R0043 tRNA Calni_R0043 NC_014758.1 1934533 1934624 R tRNA-Ser complement(1934533..1934624) Calditerrivibrio nitroreducens DSM 19672 10009908 Calni_R0044 tRNA Calni_R0044 NC_014758.1 1974127 1974199 R tRNA-Arg complement(1974127..1974199) Calditerrivibrio nitroreducens DSM 19672 10009948 Calni_R0047 tRNA Calni_R0047 NC_014758.1 2003038 2003110 R tRNA-Ala complement(2003038..2003110) Calditerrivibrio nitroreducens DSM 19672 10009976 Calni_R0048 tRNA Calni_R0048 NC_014758.1 2003202 2003278 R tRNA-Ile complement(2003202..2003278) Calditerrivibrio nitroreducens DSM 19672 10009977 Calni_R0050 tRNA Calni_R0050 NC_014758.1 2143698 2143769 R tRNA-Val complement(2143698..2143769) Calditerrivibrio nitroreducens DSM 19672 10010107 Calni_R0030 rRNA Calni_R0030 NC_014758.1 1398213 1398330 R 5S ribosomal RNA complement(1398213..1398330) Calditerrivibrio nitroreducens DSM 19672 10009369 Calni_R0031 rRNA Calni_R0031 NC_014758.1 1398397 1401301 R 23S ribosomal RNA complement(1398397..1401301) Calditerrivibrio nitroreducens DSM 19672 10009370 Calni_R0034 rRNA Calni_R0034 NC_014758.1 1401787 1403324 R 16S ribosomal RNA complement(1401787..1403324) Calditerrivibrio nitroreducens DSM 19672 10009373 Calni_R0045 rRNA Calni_R0045 NC_014758.1 1999897 2000014 R 5S ribosomal RNA complement(1999897..2000014) Calditerrivibrio nitroreducens DSM 19672 10009974 Calni_R0046 rRNA Calni_R0046 NC_014758.1 2000081 2002985 R 23S ribosomal RNA complement(2000081..2002985) Calditerrivibrio nitroreducens DSM 19672 10009975 Calni_R0049 rRNA Calni_R0049 NC_014758.1 2003471 2005008 R 16S ribosomal RNA complement(2003471..2005008) Calditerrivibrio nitroreducens DSM 19672 10009978