-- dump date 20240506_003059 -- class Genbank::Contig -- table contig_comment -- id comment NC_014652.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002219.1.REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. KellyREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: RussiaREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot springREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring;REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, KamchatkaREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: NonsporulatingREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: HyperthermophileREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79CREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 22 of 36REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 22 of 36 Pseudo Genes (internal stop) :: 14 of 36REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 22 of 36 Pseudo Genes (internal stop) :: 14 of 36 Pseudo Genes (multiple problems) :: 15 of 36REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 22 of 36 Pseudo Genes (internal stop) :: 14 of 36 Pseudo Genes (multiple problems) :: 15 of 36 CRISPR Arrays :: 5REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 22 of 36 Pseudo Genes (internal stop) :: 14 of 36 Pseudo Genes (multiple problems) :: 15 of 36 CRISPR Arrays :: 5 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002219.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087032 Source DNA and organism available from Robert M. Kelly (rmkelly@eos.ncsu.edu) Contacts: Robert M. Kelly (rmkelly@eos.ncsu.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Caldicellulosiruptor hydrothermalis 108 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Hot spring num_replicons :: 1 ref_biomaterial :: DSM 18901 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi07642 Type Strain :: Yes Isolation Site :: Terrestrial neutral geothermal spring; Russia, Kamchatka Cell Shape :: Rod-shaped Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 79C pH :: 7.0 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/25/2024 07:17:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,682 CDSs (total) :: 2,621 Genes (coding) :: 2,585 CDSs (with protein) :: 2,585 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 18 of 36 Pseudo Genes (incomplete) :: 22 of 36 Pseudo Genes (internal stop) :: 14 of 36 Pseudo Genes (multiple problems) :: 15 of 36 CRISPR Arrays :: 5 ##Genome-Annotation-Data-END## COMPLETENESS: full length.